{"meta":{"query_hash":"e2168b3bf947","filters":{"venue":"Modern Pathology"},"cohort_total":552,"direct_labels_cover":2,"predictions_cover":552,"exported":552,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/e2168b3bf947","api":"https://metacan.xera.ac/api/v1/cohort?venue=Modern+Pathology"},"results":[{"id":"W1517888833","doi":"10.1038/modpathol.2012.184","title":"Non-Hodgkin lymphoma: the clinician's perspective—a view from the receiving end","year":2013,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Lymphoma; Medicine; Disease; Natural history; Intensive care medicine; Intervention (counseling); Stage (stratigraphy); Perspective (graphical); Pathology; Internal medicine; Computer science; Psychiatry; Biology; Artificial intelligence","score_opus":0.06474203285072698,"score_gpt":0.35954813406556374,"score_spread":0.29480610121483675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1517888833","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000054854987,0.9876659,0.00010259809,0.009175546,0.0019201504,0.0000015075119,0.000010009975,0.0000056472127,0.0010638081],"genre_scores_gemma":[0.0011226571,0.9855628,0.000261272,0.007874173,0.0043146596,0.0000035178987,0.00001826602,0.0000027440437,0.0008399485],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990965,0.00023289133,0.0001557834,0.00010038852,0.00034183936,0.00007259464],"domain_scores_gemma":[0.996108,0.0018844838,0.0004339288,0.000068177156,0.0011261667,0.00037931197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017998454,0.00057535426,0.0015892582,0.0022582565,0.0005913261,0.002711124,0.0011902364,0.0037235853,0.004092407],"category_scores_gemma":[0.0045753233,0.00033048433,0.00053387904,0.0022762928,0.0012938417,0.00526239,0.0016294096,0.0054328092,0.0024503784],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008903302,0.00004751345,0.0005608592,0.014125973,0.00007393919,0.0012020972,0.00029313518,0.00019567298,0.00073817297,0.010593674,0.26209363,0.70998627],"study_design_scores_gemma":[0.000011107003,0.00003193192,0.0005601092,0.007534572,0.000046427806,0.0034095861,0.00030286686,0.000045285142,0.00006310262,0.0030719144,0.9849036,0.000019496596],"about_ca_topic_score_codex":0.0010943798,"about_ca_topic_score_gemma":0.0034264356,"teacher_disagreement_score":0.004092407,"about_ca_system_score_codex":0.0012909011,"about_ca_system_score_gemma":0.0029916626,"threshold_uncertainty_score":0.013690412},"labels":[],"label_agreement":null},{"id":"W1526094093","doi":"10.1038/modpathol.2015.77","title":"Data set for reporting of ovary, fallopian tube and primary peritoneal carcinoma: recommendations from the International Collaboration on Cancer Reporting (ICCR)","year":2015,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":208,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; University Health Network; University of Toronto","funders":"","keywords":"Medicine; Serous carcinoma; Cancer; Ovarian cancer; Gynecology; Family medicine; Internal medicine","score_opus":0.3025764608946879,"score_gpt":0.4550846515028896,"score_spread":0.1525081906082017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1526094093","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":"reporting","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":"reporting","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0029256328,0.6010356,0.026987705,0.0514881,0.014078981,0.012240503,0.2760968,0.0010290451,0.014117609],"genre_scores_gemma":[0.01792413,0.52335054,0.12489204,0.02828853,0.0016544503,0.029443324,0.26973152,0.0004163552,0.004299084],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.901964,0.025599843,0.05624773,0.002844245,0.011782548,0.0015617016],"domain_scores_gemma":[0.85134244,0.048523486,0.034476258,0.009594574,0.053195972,0.002867246],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.082470596,0.0022474132,0.009394826,0.020278333,0.0014743191,0.005283922,0.011032389,0.0037288212,0.008167281],"category_scores_gemma":[0.14816548,0.0017526412,0.011875862,0.020800473,0.002751365,0.0043476154,0.0065472806,0.006027831,0.0036931636],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007020958,0.00013737056,0.008816073,0.32993037,0.0040697036,0.00023882903,0.0011421153,0.001059611,0.0014632138,0.017736314,0.29038945,0.3443149],"study_design_scores_gemma":[0.00044899998,0.00013266873,0.013671483,0.24748518,0.005524298,0.0003551513,0.00078580383,0.00028611877,0.0014678425,0.0044570947,0.7252246,0.00016077323],"about_ca_topic_score_codex":0.036282904,"about_ca_topic_score_gemma":0.025544642,"teacher_disagreement_score":0.9175294,"about_ca_system_score_codex":0.0072406908,"about_ca_system_score_gemma":0.046751983,"threshold_uncertainty_score":0.4361514},"labels":[],"label_agreement":null},{"id":"W1535415765","doi":"10.1038/modpathol.2011.206","title":"‘Genetic heterogeneity' in HER2/neu testing by fluorescence in situ hybridization: a study of 2522 cases","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Fluorescence in situ hybridization; Biology; Breast carcinoma; Genetic heterogeneity; In situ; Fish <Actinopterygii>; Pathology; Molecular biology; Chromosome; Breast cancer; Phenotype; Genetics; Gene; Cancer; Medicine; Chemistry","score_opus":0.09402426994475052,"score_gpt":0.3758515445733378,"score_spread":0.28182727462858725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1535415765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99935144,0.00020135977,0.00011932584,0.000014479,0.0000016436103,0.00001730348,0.00005844494,0.0000020257976,0.00023403362],"genre_scores_gemma":[0.99948645,0.000102721555,0.00011875488,0.00001851694,0.000006492165,0.000016631562,0.00016267294,0.0000022493523,0.00008557249],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983688,0.00031140298,0.0002777415,0.00049350515,0.0003422641,0.00020622207],"domain_scores_gemma":[0.99812037,0.0005604486,0.0006273059,0.000251452,0.00018936621,0.00025095802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013512373,0.0003511506,0.00041419352,0.0018878,0.0006009807,0.00059418764,0.00052491395,0.0006206095,0.0012354844],"category_scores_gemma":[0.0041713556,0.0005322133,0.00038166158,0.0012900622,0.0007823283,0.000568509,0.0008417869,0.00034192947,0.00046205535],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012093733,0.000046629404,0.99315417,0.000015915546,0.000020890986,0.0034566517,0.000275979,0.00004511278,0.0009286503,0.000026796482,0.00006519614,0.0018430395],"study_design_scores_gemma":[0.000013004209,0.00023091503,0.97840047,0.000015380856,0.00003607491,0.018886486,0.0009730474,0.0003177987,0.0004983207,0.000033661006,0.0005813192,0.0000134871425],"about_ca_topic_score_codex":0.002487469,"about_ca_topic_score_gemma":0.0022500535,"teacher_disagreement_score":0.002487469,"about_ca_system_score_codex":0.0005147228,"about_ca_system_score_gemma":0.00028057027,"threshold_uncertainty_score":0.00714612},"labels":[],"label_agreement":null},{"id":"W1966714888","doi":"10.1038/modpathol.3800484","title":"MDM2 protein expression is a negative prognostic marker in breast carcinoma","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; BC Cancer Agency","funders":"Michael Smith Health Research BC","keywords":"Mdm2; Tissue microarray; Immunostaining; Oncogene; Medicine; Immunohistochemistry; Pathology; Survival analysis; Cancer; Oncology; Internal medicine; Biology; Apoptosis; Cell cycle; Genetics","score_opus":0.010994783782162974,"score_gpt":0.24169720077899468,"score_spread":0.2307024169968317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966714888","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98999023,0.0059966445,0.0007170708,0.0005769511,0.00007936637,0.0000049702003,0.00017191433,0.00002825982,0.0024345198],"genre_scores_gemma":[0.99803036,0.0009706818,0.00018984638,0.000031236665,0.00009993711,0.0000042158035,0.00013613903,0.0000036360805,0.0005339595],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996728,0.00009893961,0.000030681906,0.000044744378,0.00009587068,0.000057147234],"domain_scores_gemma":[0.9990571,0.00040145093,0.00019466979,0.00006336575,0.00013800639,0.00014528459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009096907,0.00027502226,0.00043142584,0.0011250387,0.00045888164,0.0008138279,0.00035135853,0.00048516341,0.0016622712],"category_scores_gemma":[0.0020943386,0.00019800212,0.00014591293,0.0007865191,0.0005183803,0.00052444736,0.00031627284,0.00046888014,0.00041160436],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002833507,0.00014105547,0.89159375,0.00014069378,0.00012293752,0.0016928214,0.00015653447,0.00028124955,0.06475572,0.0005859715,0.0013725106,0.036323205],"study_design_scores_gemma":[0.00005196363,0.00059088087,0.94255567,0.00003813538,0.00031013886,0.00958055,0.00040418652,0.0020759036,0.034799993,0.0017081341,0.007860801,0.00002359152],"about_ca_topic_score_codex":0.00020072264,"about_ca_topic_score_gemma":0.00030438974,"teacher_disagreement_score":0.0016622712,"about_ca_system_score_codex":0.00025970637,"about_ca_system_score_gemma":0.00029188,"threshold_uncertainty_score":0.005560875},"labels":[],"label_agreement":null},{"id":"W1967362046","doi":"10.1038/modpathol.3800996","title":"WRN promoter methylation possibly connects mucinous differentiation, microsatellite instability and CpG island methylator phenotype in colorectal cancer","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Gary Bennett Family Fund; National Cancer Institute; Entertainment Industry Foundation","keywords":"Microsatellite instability; Biology; DNA methylation; Cancer research; Methylation; Cancer; MLH1; CpG site; Colorectal cancer; Genetics; DNA mismatch repair; Gene; Allele; Microsatellite; Gene expression","score_opus":0.01013860810196407,"score_gpt":0.2647510750624652,"score_spread":0.2546124669605011,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967362046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99649674,0.0011136316,0.0013764773,0.000068819565,0.000010740743,0.000005290488,0.00013133034,0.000054777498,0.00074222876],"genre_scores_gemma":[0.99879456,0.00017486609,0.00034861182,0.000010804583,0.000004910123,0.0000024612727,0.0000870058,0.0000048028887,0.00057196413],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99989676,0.000021035905,0.000010882988,0.000029643179,0.000017949755,0.000023648463],"domain_scores_gemma":[0.99978966,0.000032147207,0.000081116894,0.000034943187,0.000023030116,0.000039140294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021156417,0.00019287855,0.00019919567,0.00051036204,0.0001296192,0.00024431222,0.00024311323,0.00021694973,0.001296513],"category_scores_gemma":[0.00048547413,0.00017739924,0.00014449391,0.00023596182,0.00028323857,0.00035528617,0.00026251952,0.00028368668,0.00022540429],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063912605,0.000023814802,0.036091976,0.00007387715,0.00003381649,0.0005192316,0.000098339784,0.00011991984,0.9569027,0.00050384336,0.00005838749,0.004934994],"study_design_scores_gemma":[0.000039170467,0.00039752058,0.446536,0.000013170307,0.0001092,0.0046445425,0.0002451149,0.0015215738,0.54179066,0.0014274544,0.003250962,0.000024662555],"about_ca_topic_score_codex":0.00078831956,"about_ca_topic_score_gemma":0.00089950603,"teacher_disagreement_score":0.001296513,"about_ca_system_score_codex":0.00019883076,"about_ca_system_score_gemma":0.00013812455,"threshold_uncertainty_score":0.004337311},"labels":[],"label_agreement":null},{"id":"W1967676521","doi":"10.1097/01.mp.0000067424.12280.bc","title":"Granzyme B in Atherosclerosis and Transplant Vascular Disease: Association with Cell Death and Atherosclerotic Disease Severity","year":2003,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Atherosclerosis and Cardiovascular Diseases","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Providence Health Care; St. Paul's Hospital","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Heart and Stroke Foundation of Canada; Killam Trusts; Heart and Stroke Foundation of British Columbia and Yukon; St. Paul's Foundation","keywords":"Granzyme B; Granzyme; Pathology; Biology; Fibrous cap; CD68; Vascular smooth muscle; Immunohistochemistry; Medicine; Immunology; Immune system; T cell; Endocrinology; CD8; Perforin","score_opus":0.008428393604330946,"score_gpt":0.1816352016830148,"score_spread":0.17320680807868385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967676521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983829,0.0011203269,0.0002105511,0.000044052285,0.000007872099,0.000002357952,0.000022780083,0.000007544339,0.00020157348],"genre_scores_gemma":[0.9993944,0.00023796615,0.00011217208,0.000010453408,0.000026770296,0.0000017975564,0.000038182974,0.0000023527718,0.00017589632],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99964905,0.00013517021,0.00006090821,0.000041735755,0.00007225941,0.000040940577],"domain_scores_gemma":[0.9966659,0.0008833637,0.0013692182,0.00030362385,0.00016348364,0.00061447575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089118106,0.0002770144,0.00049085927,0.0008365717,0.00023547077,0.0007695551,0.00034386487,0.00086034875,0.0013560866],"category_scores_gemma":[0.002319625,0.00023080803,0.00023990085,0.0007567288,0.00051894883,0.0005453247,0.00048185428,0.0010779481,0.00026148657],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011950405,0.00029441636,0.9566938,0.000048358423,0.00022054426,0.0005480872,0.000114722236,0.0002045463,0.020046335,0.00020222092,0.00009245581,0.009584014],"study_design_scores_gemma":[0.00010285326,0.0012257665,0.99023366,0.0000053548056,0.00016050557,0.003963339,0.00011032849,0.00084538443,0.0027152135,0.0003215334,0.000302578,0.00001345011],"about_ca_topic_score_codex":0.00017150154,"about_ca_topic_score_gemma":0.00015820435,"teacher_disagreement_score":0.0013560866,"about_ca_system_score_codex":0.00015749932,"about_ca_system_score_gemma":0.00020390002,"threshold_uncertainty_score":0.0047130585},"labels":[],"label_agreement":null},{"id":"W1969928256","doi":"10.1038/modpathol.2012.136","title":"Endometrial sarcomas: an immunohistochemical and JAZF1 re-arrangement study in low-grade and undifferentiated tumors","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of Toronto; University Health Network; Toronto General Hospital; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Endometrial stromal sarcoma; Pleomorphism (cytology); Sarcoma; Stromal cell; Pathology; Undifferentiated Pleomorphic Sarcoma; Immunohistochemistry; Nuclear atypia; Hematopathology; Medicine; Biology; Soft tissue sarcoma; Cytogenetics; Gene","score_opus":0.0354861325615189,"score_gpt":0.3142396578263247,"score_spread":0.2787535252648058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969928256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99654084,0.0011882809,0.00067687576,0.000020970141,0.000006161995,0.000017025925,0.0000488179,0.000011852662,0.0014891395],"genre_scores_gemma":[0.99840575,0.00039234664,0.0006111329,0.000008085107,0.000007793834,0.000009896259,0.00008231934,0.0000030552721,0.00047979003],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997613,0.000041780346,0.00004871935,0.000040393614,0.000047136637,0.000060587354],"domain_scores_gemma":[0.9997178,0.00006273171,0.000052766285,0.000045190853,0.00006653885,0.00005497521],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066763227,0.00021415732,0.0001952721,0.0016834465,0.00042532608,0.00040386192,0.00024820786,0.00024880492,0.001579327],"category_scores_gemma":[0.00052756316,0.00028283594,0.0002126565,0.0005976893,0.00044859562,0.0005329916,0.00040952608,0.00019940452,0.00034003446],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020011254,0.0001699199,0.2564727,0.00019423253,0.0001079077,0.006803242,0.0008373863,0.00018909694,0.71918786,0.0005551146,0.00010735279,0.013373977],"study_design_scores_gemma":[0.00016419854,0.0012459724,0.7372923,0.000040371004,0.00046573416,0.04422779,0.0031817777,0.0028748242,0.20089328,0.0006153686,0.00896192,0.00003648347],"about_ca_topic_score_codex":0.00063872826,"about_ca_topic_score_gemma":0.0008915344,"teacher_disagreement_score":0.0016834465,"about_ca_system_score_codex":0.00023138532,"about_ca_system_score_gemma":0.00015107823,"threshold_uncertainty_score":0.0052833557},"labels":[],"label_agreement":null},{"id":"W1970173349","doi":"10.1038/modpathol.2010.160","title":"International Society of Urological Pathology (ISUP) Consensus Conference on Handling and Staging of Radical Prostatectomy Specimens. Working group 4: seminal vesicles and lymph nodes","year":2010,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":157,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Toronto; University Health Network","funders":"","keywords":"Lymph; Prostatectomy; Medicine; Consensus conference; Lymph node; Pathology; Prostate cancer; Urology; General surgery; Internal medicine; Cancer","score_opus":0.06486014910282249,"score_gpt":0.3277452793636943,"score_spread":0.2628851302608718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970173349","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030692673,0.99064565,0.0008796022,0.0027701678,0.0015068584,0.00009179114,0.00024965152,0.00002959788,0.0035198384],"genre_scores_gemma":[0.0012381318,0.99358845,0.0019801157,0.0008007336,0.00038460584,0.00006797157,0.0006466407,0.0000067257533,0.0012865715],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99900514,0.0002100213,0.00019964851,0.000075612064,0.0004398679,0.00006978662],"domain_scores_gemma":[0.9970701,0.00068485964,0.00036074116,0.000076141245,0.0016628167,0.00014526138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004938491,0.0010591294,0.002228783,0.006329075,0.0004928861,0.0011301377,0.0030224477,0.0014243062,0.0032928279],"category_scores_gemma":[0.0033074894,0.00054700335,0.0010621718,0.0049142144,0.000883101,0.0015361953,0.0012861057,0.0020399108,0.002533854],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008150982,0.00004687787,0.0006740484,0.017225837,0.00010807333,0.00026871412,0.00007425476,0.00022483016,0.0010690397,0.0011657758,0.11835069,0.86071026],"study_design_scores_gemma":[0.00003816348,0.0000677076,0.003884016,0.015904052,0.0003302486,0.0023245965,0.00016695294,0.00010482609,0.00073392916,0.0012071148,0.97520727,0.00003116491],"about_ca_topic_score_codex":0.006315657,"about_ca_topic_score_gemma":0.012583301,"teacher_disagreement_score":0.006329075,"about_ca_system_score_codex":0.001469145,"about_ca_system_score_gemma":0.0069277417,"threshold_uncertainty_score":0.026117563},"labels":[],"label_agreement":null},{"id":"W1971083266","doi":"10.1038/modpathol.2013.55","title":"The diagnostic utility of TP53 and CDKN2A to distinguish ovarian high-grade serous carcinoma from low-grade serous ovarian tumors","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Health Sciences Centre; University of Toronto; University of Calgary; Sunnybrook Health Science Centre; Calgary Laboratory Services; University of Manitoba","funders":"Calgary Laboratory Services","keywords":"Serous fluid; CDKN2A; Serous carcinoma; Pathology; Tissue microarray; Medicine; Immunohistochemistry; Clear cell; Cancer; Internal medicine; Ovarian cancer","score_opus":0.015165910551057246,"score_gpt":0.24298512462973768,"score_spread":0.22781921407868044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971083266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880145,0.007188845,0.0014825135,0.0003137511,0.00007177908,0.000023072786,0.00006432045,0.000035257068,0.0028059785],"genre_scores_gemma":[0.99761957,0.00076128123,0.0013417717,0.000037725506,0.00003879667,0.0000058185324,0.000039002487,0.0000045622514,0.00015145927],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99929833,0.00024326022,0.00009704613,0.000077506185,0.00016988635,0.000113927905],"domain_scores_gemma":[0.99737144,0.001276326,0.0003088641,0.00018802895,0.00054552214,0.00030978772],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003562027,0.00042156005,0.00038188795,0.0042690593,0.00043542506,0.0013581314,0.0006057823,0.0008560613,0.0009670053],"category_scores_gemma":[0.007816295,0.0003525878,0.00033691953,0.00081629417,0.0010921292,0.001363006,0.0005255688,0.00061319536,0.0002997772],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024634036,0.00008809774,0.9299388,0.00008180315,0.000113607966,0.0021651764,0.00015749874,0.00025638624,0.029016983,0.0003489229,0.00024981992,0.03511941],"study_design_scores_gemma":[0.00021113895,0.0008333138,0.8774663,0.00011058549,0.0006363377,0.032328352,0.0012420288,0.017953124,0.06268921,0.0022600915,0.0042083603,0.00006109161],"about_ca_topic_score_codex":0.001277492,"about_ca_topic_score_gemma":0.002117223,"teacher_disagreement_score":0.0042690593,"about_ca_system_score_codex":0.0005276967,"about_ca_system_score_gemma":0.0004687506,"threshold_uncertainty_score":0.018838048},"labels":[],"label_agreement":null},{"id":"W1972182149","doi":"10.1038/modpathol.2010.215","title":"Calculator for ovarian carcinoma subtype prediction","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary; Centre for Health Evaluation and Outcome Sciences; Vancouver General Hospital; Calgary Laboratory Services; BC Cancer Agency","funders":"BC Cancer Agency; Eli Lilly Canada; Michael Smith Health Research BC; National Cancer Institute; Sanofi","keywords":"Ovarian carcinoma; Serous carcinoma; Ovarian cancer; Oncology; Serous fluid; Medicine; Tissue microarray; Logistic regression; Internal medicine; Cohort; Anatomical pathology; Pathology; Immunohistochemistry; Cancer","score_opus":0.018039823172582667,"score_gpt":0.2712445993056805,"score_spread":0.25320477613309783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972182149","genre_codex":"methods","genre_gemma":"software","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"software","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32966116,0.0051984903,0.5734938,0.0017274867,0.0007185505,0.0010053525,0.009027434,0.06042033,0.018747417],"genre_scores_gemma":[0.60548365,0.00072524516,0.3793747,0.0003401004,0.0002572926,0.0007462768,0.004236303,0.0007559271,0.008080451],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993181,0.00016846364,0.00008066956,0.0001165471,0.0002797604,0.000036536643],"domain_scores_gemma":[0.9951172,0.0030503464,0.00040241136,0.00033394847,0.0009188616,0.00017724387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016657677,0.00047980715,0.0010332828,0.0036780231,0.0006048169,0.001175242,0.0008637423,0.00051308447,0.00794764],"category_scores_gemma":[0.010166481,0.0003306608,0.0003799224,0.0016232304,0.00017192247,0.0007557876,0.00067328964,0.0006439602,0.002166242],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028420212,0.00038519397,0.078585625,0.00027301582,0.00019277938,0.0003498342,0.00008136515,0.011361923,0.0052647693,0.00563608,0.03236607,0.8626613],"study_design_scores_gemma":[0.0009238961,0.00077958195,0.056779385,0.00019676813,0.0006340517,0.0035876369,0.00015476353,0.83959454,0.034883346,0.020525632,0.041787315,0.00015309491],"about_ca_topic_score_codex":0.0022843666,"about_ca_topic_score_gemma":0.0020446456,"teacher_disagreement_score":0.00794764,"about_ca_system_score_codex":0.00050197536,"about_ca_system_score_gemma":0.0011273812,"threshold_uncertainty_score":0.026587546},"labels":[],"label_agreement":null},{"id":"W1972296335","doi":"10.1038/modpathol.2014.123","title":"Modeling complexity in pathologist workload measurement: the Automatable Activity-Based Approach to Complexity Unit Scoring (AABACUS)","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Clinical Laboratory Practices and Quality Control","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Workload; Subspecialty; Hematopathology; Medical diagnosis; Medicine; Medical physics; Pathology; Benchmarking; Medical laboratory; Computer science; Biology","score_opus":0.38559696552563677,"score_gpt":0.38928286585726574,"score_spread":0.0036859003316289662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972296335","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034724783,0.00015610504,0.9632721,0.00023979392,0.00004909759,0.00006389746,0.00016696834,0.0004137962,0.0009133836],"genre_scores_gemma":[0.7203565,0.00021860417,0.2778211,0.00008928342,0.000083058054,0.0001896855,0.00028570002,0.00008116992,0.0008747628],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99682885,0.0014467419,0.00024297842,0.00064238766,0.0006533816,0.00018571457],"domain_scores_gemma":[0.98606366,0.009499567,0.0013858189,0.0011824543,0.0014937747,0.00037475626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029641378,0.0011370942,0.0009776354,0.0018979098,0.0006967275,0.0025938868,0.0021656991,0.0011970345,0.00097008556],"category_scores_gemma":[0.018272474,0.0007541631,0.0013935514,0.0015735833,0.0011039176,0.0027154982,0.0018203919,0.0014466109,0.0002140281],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007345295,0.00007920118,0.007871452,0.00006439292,0.00008960284,0.000053188618,0.00018185815,0.9335332,0.00081869465,0.020038936,0.0004747772,0.036721297],"study_design_scores_gemma":[0.0000021849169,0.000013866188,0.0003802955,0.0000064488804,0.00000990763,0.000012019381,0.000009084272,0.9892709,0.00015215433,0.009973207,0.00016254369,0.0000073355313],"about_ca_topic_score_codex":0.018890679,"about_ca_topic_score_gemma":0.015161554,"teacher_disagreement_score":0.018890679,"about_ca_system_score_codex":0.0017916986,"about_ca_system_score_gemma":0.0021666905,"threshold_uncertainty_score":0.037561417},"labels":[],"label_agreement":null},{"id":"W1972675234","doi":"10.1038/modpathol.3800616","title":"D2-40 antibody immunoreactivity in developing human brain, brain tumors and cultured neural cells","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Mary's Hospital Centre","funders":"","keywords":"Pathology; Choroid plexus; Biology; Neuroepithelial cell; Neural stem cell; Medicine; Stem cell; Central nervous system; Cell biology; Neuroscience","score_opus":0.014893050382236053,"score_gpt":0.2891115064650761,"score_spread":0.27421845608284007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972675234","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97581404,0.008591791,0.005278919,0.00010124877,0.00006739864,0.00003218126,0.00040700112,0.00007605257,0.009631499],"genre_scores_gemma":[0.97433066,0.005643705,0.005971632,0.00007091353,0.000038882277,0.00009722253,0.0016731548,0.000044464796,0.012129272],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998864,0.000017432445,0.000015971911,0.000030771225,0.000017733651,0.000031631713],"domain_scores_gemma":[0.9997987,0.00008700411,0.000014256362,0.000025736523,0.000036140336,0.000038190738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029921555,0.00024283987,0.0002056118,0.00078749406,0.0003873402,0.0004057099,0.0002720135,0.00028616737,0.0019878158],"category_scores_gemma":[0.00025946926,0.0002816208,0.0002453489,0.00033198937,0.00035306008,0.00036859984,0.000334929,0.0004540581,0.00057377876],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017075296,0.000036936894,0.0012441801,0.00008526919,0.000016017022,0.0005474077,0.00013803199,0.000052036146,0.9951237,0.0005868228,0.00005848378,0.0019403874],"study_design_scores_gemma":[0.000047833437,0.00064733357,0.037972905,0.000036001496,0.0001277478,0.005435961,0.0004796843,0.0012563062,0.93939054,0.0007444262,0.0138427485,0.000018519986],"about_ca_topic_score_codex":0.0022962007,"about_ca_topic_score_gemma":0.0023878533,"teacher_disagreement_score":0.0022962007,"about_ca_system_score_codex":0.0003321375,"about_ca_system_score_gemma":0.00039563022,"threshold_uncertainty_score":0.0066499114},"labels":[],"label_agreement":null},{"id":"W1974175527","doi":"10.1038/modpathol.3880378","title":"Diffuse Calcification of the Airways","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Medical Imaging and Pathology Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; St. Paul's Hospital","funders":"","keywords":"Calcification; Pathology; Medicine; Dystrophic calcification; Metastatic calcification; Etiology; Calcinosis; Airway; Lung; Internal medicine; Surgery","score_opus":0.03741850293291868,"score_gpt":0.29546164849000633,"score_spread":0.2580431455570876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974175527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87337744,0.02488343,0.010788134,0.00261346,0.00070280477,0.00023541189,0.0009844089,0.0008302283,0.08558463],"genre_scores_gemma":[0.99193525,0.0017916689,0.0014996104,0.00036737334,0.0007196379,0.000011804603,0.00011597249,0.000032031403,0.0035265707],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9995617,0.000044189765,0.000042320302,0.00015800413,0.00011024093,0.00008353911],"domain_scores_gemma":[0.9983759,0.0004554334,0.00023153964,0.0004432072,0.00012560829,0.00036835053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005158704,0.001023804,0.0005773379,0.0024736112,0.00066518446,0.0007352715,0.0008312327,0.0015938325,0.0056529567],"category_scores_gemma":[0.003471352,0.00061663415,0.0005384691,0.0011281929,0.0020065715,0.0013419451,0.0011312977,0.0020100505,0.001815362],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083086715,0.00009233257,0.05436828,0.0005107949,0.00011472337,0.8684952,0.00039314348,0.00046179147,0.03774972,0.0039964337,0.0013369981,0.031649657],"study_design_scores_gemma":[0.00007170024,0.00029945272,0.052617665,0.00007648641,0.000070907765,0.92950696,0.000087199325,0.0007326814,0.008591017,0.0025230823,0.0053933295,0.000029522358],"about_ca_topic_score_codex":0.0004711634,"about_ca_topic_score_gemma":0.0004365715,"teacher_disagreement_score":0.0056529567,"about_ca_system_score_codex":0.00032760302,"about_ca_system_score_gemma":0.00034276038,"threshold_uncertainty_score":0.018911064},"labels":[],"label_agreement":null},{"id":"W1975160538","doi":"10.1038/modpathol.3800950","title":"Identification of prognostically relevant and reproducible subsets of endometrial adenocarcinoma based on clustering analysis of immunostaining data","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Vancouver General Hospital; BC Cancer Agency","funders":"","keywords":"Exact test; Adenocarcinoma; Hierarchical clustering; Proportional hazards model; Survival analysis; Pathology; Log-rank test; Medicine; Oncology; Multivariate analysis; Internal medicine; Stage (stratigraphy); Univariate analysis; Tissue microarray; Univariate; Cluster analysis; Multivariate statistics; Cancer; Biology; Statistics; Mathematics","score_opus":0.056834930539106834,"score_gpt":0.3367025354465555,"score_spread":0.27986760490744866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975160538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901114,0.0004723991,0.008027118,0.00006307428,0.000011931767,0.00006312897,0.0006270264,0.00010261837,0.0005212996],"genre_scores_gemma":[0.99195683,0.00009766346,0.0060650455,0.000012137427,0.000013355181,0.000037992868,0.0016559815,0.000020906793,0.0001399916],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990538,0.00019454534,0.0001409461,0.0002225132,0.00022300308,0.00016534656],"domain_scores_gemma":[0.99778783,0.0007535012,0.00045465972,0.00031126273,0.0004926926,0.00020005017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012464159,0.000377883,0.0008208887,0.0034181415,0.00071699865,0.0011164779,0.00040622384,0.0004168377,0.0006546757],"category_scores_gemma":[0.003370112,0.0001688919,0.00066467025,0.0020924131,0.00036045566,0.0003748687,0.000491218,0.00033004195,0.00030508498],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021611624,0.0002114703,0.77610993,0.0002762976,0.0006786978,0.00048020307,0.00069964817,0.0038046706,0.14784415,0.00038607305,0.0009584513,0.06638932],"study_design_scores_gemma":[0.00003675686,0.00034378713,0.9574636,0.000024198125,0.00042204154,0.0011943374,0.00052654743,0.019393818,0.018353231,0.0010445758,0.0011526662,0.000044459226],"about_ca_topic_score_codex":0.0021227673,"about_ca_topic_score_gemma":0.0027730349,"teacher_disagreement_score":0.0034181415,"about_ca_system_score_codex":0.0004632147,"about_ca_system_score_gemma":0.0005813695,"threshold_uncertainty_score":0.006591797},"labels":[],"label_agreement":null},{"id":"W1977557805","doi":"10.1038/modpathol.3880300","title":"Comparison of the WHO/ISUP Classification and Cytokeratin 20 Expression in Predicting the Behavior of Low-Grade Papillary Urothelial Tumors","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":117,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of British Columbia Hospital","funders":"","keywords":"Cytokeratin; Medicine; Pathology; Immunostaining; Papillary tumor; Transitional cell carcinoma; Papilloma; Transitional Cell; Carcinoma; Keratin 7; Papillary carcinoma; Surgical pathology; Immunohistochemistry; Cancer; Bladder cancer; Internal medicine","score_opus":0.0413407852651731,"score_gpt":0.327754110377223,"score_spread":0.2864133251120499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977557805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99746597,0.0009783036,0.00026781842,0.000086728294,0.000023920828,0.000007914761,0.00014993711,0.000007024178,0.00101248],"genre_scores_gemma":[0.9991856,0.00018367913,0.00018340153,0.000016142883,0.00001647437,0.0000038505627,0.00020276089,0.0000035747855,0.0002045157],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99958116,0.00016890006,0.000043199976,0.000042222277,0.000077937926,0.00008657684],"domain_scores_gemma":[0.9979159,0.0010577465,0.00028927327,0.00008578681,0.00030933114,0.0003418831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014936848,0.00037190292,0.0003475005,0.0011193777,0.00025629022,0.0006998052,0.00037731693,0.0005257557,0.0008217993],"category_scores_gemma":[0.0033855976,0.00016169883,0.00047940642,0.0005582676,0.00030737626,0.000583675,0.0003046374,0.00042647592,0.0002347512],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015127736,0.000046788584,0.9882858,0.000016450578,0.00010776106,0.00005615299,0.000047550147,0.00023269662,0.0009796217,0.000032376447,0.00017083374,0.00851128],"study_design_scores_gemma":[0.000034443285,0.0005157096,0.9946567,0.000014165037,0.00021805333,0.0003081994,0.00017636451,0.0027600776,0.00067807396,0.00011308801,0.00051601016,0.000009156754],"about_ca_topic_score_codex":0.0025432885,"about_ca_topic_score_gemma":0.004239896,"teacher_disagreement_score":0.0025432885,"about_ca_system_score_codex":0.0003068185,"about_ca_system_score_gemma":0.00041044748,"threshold_uncertainty_score":0.007899404},"labels":[],"label_agreement":null},{"id":"W1977871230","doi":"10.1038/modpathol.2012.189","title":"Testicular hilum and vascular invasion predict advanced clinical stage in nonseminomatous germ cell tumors","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Testicular diseases and treatments","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Rete testis; Pathology; Spermatic cord; Germ cell tumors; Coagulative necrosis; Medicine; Seminoma; Stage (stratigraphy); Germ cell; Epididymis; Biology; Internal medicine; Sperm; Andrology","score_opus":0.02134966416420423,"score_gpt":0.2982198593431861,"score_spread":0.27687019517898187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977871230","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986945,0.0005062013,0.00011832223,0.0000542889,0.000013315033,0.0000031982543,0.00006542318,0.000006896565,0.0005378375],"genre_scores_gemma":[0.99957126,0.00012443161,0.000083163446,0.000007896862,0.000017494975,0.0000013670115,0.000069376074,0.0000018826672,0.00012303508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999871,0.000040567687,0.000012174892,0.000017976154,0.000028439437,0.000029793306],"domain_scores_gemma":[0.998632,0.0005302184,0.00031567144,0.00006944169,0.00008487921,0.00036768615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033252756,0.00020536335,0.00028223178,0.0006824668,0.00032036364,0.000682987,0.00028660885,0.00042033874,0.0023239884],"category_scores_gemma":[0.0022982978,0.00027481915,0.00021783292,0.00083297666,0.00046866768,0.0006340774,0.00032383544,0.0005456068,0.00018985802],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119933284,0.000013403617,0.99756926,0.0000062746703,0.000015281244,0.00014442508,0.00002993515,0.000080826605,0.00044321478,0.000015066772,0.00005257792,0.0015098172],"study_design_scores_gemma":[0.000005329064,0.00005390038,0.99808025,0.0000030916642,0.000035866004,0.0007142053,0.00015784804,0.0005316549,0.00019319801,0.000060060414,0.00016163122,0.0000029870316],"about_ca_topic_score_codex":0.0015163305,"about_ca_topic_score_gemma":0.0031183448,"teacher_disagreement_score":0.0023239884,"about_ca_system_score_codex":0.0001684782,"about_ca_system_score_gemma":0.00028507484,"threshold_uncertainty_score":0.007774532},"labels":[],"label_agreement":null},{"id":"W1978044570","doi":"10.1038/modpathol.3800514","title":"Interobserver reproducibility in the diagnosis of flat epithelial atypia of the breast","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Statistics Canada; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Atypia; Medicine; Pathology; Radiology; Nuclear medicine","score_opus":0.022654126278374508,"score_gpt":0.25125920649955563,"score_spread":0.22860508022118112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978044570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96484715,0.0043126787,0.024315694,0.0001740065,0.000364529,0.00009250471,0.00026576105,0.00030718266,0.005320551],"genre_scores_gemma":[0.9963748,0.00013860574,0.0027586962,0.000046400415,0.00007777524,0.000024845092,0.00016937593,0.000069549395,0.00033989953],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.940601,0.034533232,0.007125499,0.00713312,0.009184596,0.0014225442],"domain_scores_gemma":[0.7315364,0.1985913,0.010830249,0.02867926,0.028665794,0.0016970118],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.05492648,0.00063410186,0.0009376464,0.0034605674,0.0010540808,0.002308066,0.0015226839,0.0015341582,0.0007244308],"category_scores_gemma":[0.14118628,0.0007351328,0.0011139808,0.0012068127,0.0018691559,0.0014738734,0.0023121356,0.0009491972,0.00053159223],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032146943,0.00008191922,0.9172463,0.00030685405,0.001508848,0.00041876867,0.003992405,0.002204051,0.008003157,0.00061104586,0.00084102195,0.061570924],"study_design_scores_gemma":[0.00005827105,0.00048197797,0.9661115,0.000109230925,0.0008782139,0.0023949472,0.0010943759,0.015952919,0.0096093435,0.0011559183,0.0020468128,0.000106500316],"about_ca_topic_score_codex":0.002084706,"about_ca_topic_score_gemma":0.0039439886,"teacher_disagreement_score":0.94507354,"about_ca_system_score_codex":0.0010051157,"about_ca_system_score_gemma":0.00044923773,"threshold_uncertainty_score":0.29048246},"labels":[],"label_agreement":null},{"id":"W1978047708","doi":"10.1038/modpathol.3880360","title":"Primary Extrapulmonary Sugar Tumor (PEST): A Report of Four Cases","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Tuberous Sclerosis Complex Research","field":"Medicine","cited_by":162,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Credit Valley Hospital","funders":"","keywords":"Pathology; Biology; Eosinophilic; Angiomyolipoma; Epithelioid cell; Mitosis; S100 protein; Immunohistochemistry; Medicine; Kidney; Cell biology; Endocrinology","score_opus":0.08780094082898593,"score_gpt":0.32067779297841875,"score_spread":0.23287685214943282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978047708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98828363,0.0024717515,0.0016171895,0.00033365958,0.00013384143,0.00018711055,0.00024921473,0.00015220165,0.0065713],"genre_scores_gemma":[0.9960129,0.0012005147,0.0009765801,0.0001573741,0.00032370555,0.00006782818,0.00019518416,0.000043706794,0.001022238],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9985411,0.000113780145,0.00019574941,0.0003816526,0.00021280743,0.00055493833],"domain_scores_gemma":[0.9961366,0.0009784362,0.0006524694,0.0006683003,0.00027928705,0.0012848675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064641703,0.004374461,0.0015816708,0.004704722,0.0038826412,0.0020518408,0.0029136713,0.0058111455,0.0039158314],"category_scores_gemma":[0.0053120437,0.0025969455,0.0017586137,0.0026214123,0.0051915026,0.0023013053,0.0038140826,0.002332296,0.0025274218],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009838157,0.00011668403,0.022293992,0.000050115297,0.000022891192,0.9737916,0.00037459977,0.00006753192,0.0011250657,0.00007492823,0.00012762994,0.001856533],"study_design_scores_gemma":[0.00002607226,0.0001762719,0.016206378,0.00001207581,0.000045943427,0.9817647,0.00040972602,0.00012537789,0.000735584,0.00009936963,0.00037558615,0.000022875074],"about_ca_topic_score_codex":0.0039828164,"about_ca_topic_score_gemma":0.003001632,"teacher_disagreement_score":0.0058111455,"about_ca_system_score_codex":0.0015176097,"about_ca_system_score_gemma":0.0010094306,"threshold_uncertainty_score":0.01309973},"labels":[],"label_agreement":null},{"id":"W1978254270","doi":"10.1038/modpathol.3880471","title":"p53 Alteration and Chromosomal Instability in Prostatic High-Grade Intraepithelial Neoplasia and Concurrent Carcinoma: Analysis by Immunohistochemistry, Interphase In Situ Hybridization, and Sequencing of Laser-Captured Microdissected Specimens","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Princess Margaret Cancer Centre; SickKids Foundation; Toronto General Hospital; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Pathology; Immunohistochemistry; Laser capture microdissection; Intraepithelial neoplasia; Microdissection; Biology; Chromosome instability; In situ hybridization; Carcinoma in situ; Prostate cancer; Comparative genomic hybridization; Fluorescence in situ hybridization; Prostate; Carcinoma; Cancer; Chromosome; Medicine; Genetics; Gene; Gene expression","score_opus":0.007452649877389393,"score_gpt":0.24253927045644152,"score_spread":0.23508662057905214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978254270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99832886,0.0005533313,0.00048197957,0.000016884209,0.0000031684938,0.000008925534,0.000052875104,0.0000075367752,0.00054642657],"genre_scores_gemma":[0.99897194,0.00018410315,0.00052278343,0.00000833283,0.000004941089,0.000008736163,0.000081478356,0.0000026766086,0.00021503425],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997545,0.000050715742,0.000026391575,0.00004782234,0.00007637041,0.000044211356],"domain_scores_gemma":[0.9995065,0.00019947306,0.00008068176,0.0000544509,0.000086061074,0.00007292515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038069717,0.0001480536,0.0002131022,0.0014250422,0.00047221663,0.00038938795,0.00029006597,0.00025023613,0.0009709899],"category_scores_gemma":[0.0009673085,0.00024763297,0.00015126751,0.0006936864,0.00049062277,0.00027822665,0.0002689017,0.0002646077,0.00015408633],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037732262,0.00014953064,0.39729717,0.00013046387,0.00012407431,0.0072483667,0.00053626613,0.00019781878,0.5767957,0.00022315024,0.00010492499,0.013419376],"study_design_scores_gemma":[0.000036374848,0.00040662792,0.89172435,0.0000074674463,0.000116683594,0.015468552,0.00047520944,0.0011131505,0.08961177,0.00010765791,0.00092212815,0.00001001813],"about_ca_topic_score_codex":0.0016966058,"about_ca_topic_score_gemma":0.0032025762,"teacher_disagreement_score":0.0016966058,"about_ca_system_score_codex":0.00022069577,"about_ca_system_score_gemma":0.00027445337,"threshold_uncertainty_score":0.003373444},"labels":[],"label_agreement":null},{"id":"W1978806078","doi":"10.1038/modpathol.3880449","title":"Leiomyomatosis-Like Lymphangioleiomyomatosis of the Colon in a Female with Tuberous Sclerosis","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Tuberous Sclerosis Complex Research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Tuberous sclerosis; Medicine; Leiomyomatosis; Lymphangioleiomyomatosis; Angiomyolipoma; Pathology; PDGFRA; CD117; Biopsy; CD34; Leiomyoma; Internal medicine; Kidney; GiST; Biology","score_opus":0.04485420781922429,"score_gpt":0.26947692339792,"score_spread":0.22462271557869573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978806078","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9825721,0.0016930044,0.0008420091,0.0034516694,0.00024102222,0.00012536283,0.0002822733,0.00012789013,0.01066472],"genre_scores_gemma":[0.9969957,0.00047898156,0.00036809116,0.0005882108,0.0005410473,0.000016707243,0.00005229114,0.000018130786,0.0009409134],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.999493,0.000055923134,0.00005192149,0.00014635963,0.00006352145,0.00018922324],"domain_scores_gemma":[0.9982317,0.0005817563,0.000316711,0.000097611046,0.00010161546,0.0006706243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003547012,0.001621871,0.001091438,0.0025292726,0.0029494364,0.00085004506,0.0011983904,0.004354122,0.00301631],"category_scores_gemma":[0.003653436,0.0010105665,0.00093493186,0.0012111778,0.0017704463,0.0015042337,0.0010611174,0.0025335876,0.00071133196],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008910517,0.000031975265,0.009383958,0.000023773448,0.0000057515012,0.9891021,0.00013384872,0.0000638784,0.0005898632,0.000071961025,0.00011994688,0.00038384102],"study_design_scores_gemma":[0.000028125263,0.0001333923,0.021000464,0.000011782112,0.000018039382,0.97789246,0.00020174819,0.00018674128,0.00024048796,0.00008179374,0.00018985901,0.000015056365],"about_ca_topic_score_codex":0.0052582575,"about_ca_topic_score_gemma":0.0049806554,"teacher_disagreement_score":0.0052582575,"about_ca_system_score_codex":0.0012282921,"about_ca_system_score_gemma":0.000694335,"threshold_uncertainty_score":0.01045531},"labels":[],"label_agreement":null},{"id":"W1979008949","doi":"10.1038/modpathol.3800982","title":"CpG island methylator phenotype-low (CIMP-low) colorectal cancer shows not only few methylated CIMP-high-specific CpG islands, but also low-level methylation at individual loci","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Gary Bennett Family Fund; National Cancer Institute; Colorectal Cancer Alliance","keywords":"Methylation; DNA methylation; CpG site; Phenotype; Biology; Colorectal cancer; Cancer research; Cancer; Pathology; Medicine; Genetics; Gene; Gene expression","score_opus":0.02799072502605127,"score_gpt":0.2588669947787062,"score_spread":0.23087626975265496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979008949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536264,0.0008528808,0.0012454282,0.00011190499,0.000011476229,0.0000062551508,0.00041889542,0.00010009788,0.0018904313],"genre_scores_gemma":[0.99706644,0.00028250276,0.0009823114,0.00004089798,0.000009834347,0.000008718502,0.00051571586,0.000016586577,0.0010769594],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990237,0.000014294586,0.000008191979,0.000026494567,0.000026353195,0.000022256916],"domain_scores_gemma":[0.9996331,0.00007505284,0.00013682451,0.000031998545,0.00002716842,0.000095903364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014426811,0.00036179763,0.0003039878,0.0010439587,0.00020342678,0.00031048557,0.0002222811,0.0003683715,0.0031746828],"category_scores_gemma":[0.0004623494,0.00014088121,0.00012800514,0.0005199981,0.00042336163,0.00013837292,0.0003407906,0.0003225693,0.0007040567],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063498813,0.0000375622,0.08011202,0.00012861344,0.00006179232,0.0023030825,0.000109011744,0.00010934545,0.9038177,0.00040018387,0.00045870192,0.011826869],"study_design_scores_gemma":[0.000083457635,0.0007022689,0.69306445,0.000025291218,0.00014995894,0.02688187,0.0002839204,0.00060176896,0.27039093,0.00091123435,0.006874915,0.00002992305],"about_ca_topic_score_codex":0.00077788584,"about_ca_topic_score_gemma":0.0009838556,"teacher_disagreement_score":0.0031746828,"about_ca_system_score_codex":0.00017760842,"about_ca_system_score_gemma":0.000116570234,"threshold_uncertainty_score":0.010620415},"labels":[],"label_agreement":null},{"id":"W1980325486","doi":"10.1097/01.mp.0000077515.68734.85","title":"Multicolor Karyotyping and Clinicopathological Analysis of Three Intravascular Lymphoma Cases","year":2003,"lang":"en","type":"review","venue":"Modern Pathology","topic":"CNS Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; Vancouver Hospital and Health Sciences Centre; University of British Columbia; BC Cancer Agency; Leukemia & Lymphoma Society of Canada","funders":"National Cancer Institute","keywords":"Karyotype; Pathology; Biology; Chromosomal translocation; Autopsy; Lymphoma; Chromosome; Cytogenetics; Chromothripsis; Somatic evolution in cancer; Anatomical pathology; Cancer; Medicine; Genetics; Gene","score_opus":0.10946461496025812,"score_gpt":0.37114188989077834,"score_spread":0.26167727493052023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980325486","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07496889,0.9095163,0.0043346602,0.0009964865,0.00030344535,0.000065588,0.00016944583,0.00014671728,0.009498403],"genre_scores_gemma":[0.2794053,0.70870334,0.005548222,0.0010310474,0.00058605627,0.00003709352,0.0005395506,0.000021018768,0.0041283495],"study_design_codex":"design_other","study_design_gemma":"case_report","domain_scores_codex":[0.9998165,0.000021136408,0.000047933478,0.00005065817,0.00004210698,0.000021728172],"domain_scores_gemma":[0.9997564,0.000105423336,0.000050733255,0.000023421946,0.00004368536,0.0000202621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025106012,0.00058538537,0.0005591313,0.001892778,0.0002673199,0.0005116613,0.0006669311,0.00052883587,0.0012428765],"category_scores_gemma":[0.0005503031,0.00018971019,0.00025100244,0.0015393608,0.00043800112,0.00066935626,0.00036505942,0.0004088618,0.00060076226],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019421226,0.00008351022,0.025845055,0.0037002296,0.00013753679,0.113508314,0.00057943404,0.00025558585,0.024890294,0.00041583774,0.0071190833,0.82327104],"study_design_scores_gemma":[0.000030633928,0.00014439832,0.07096642,0.000973198,0.0006508645,0.7521397,0.0006608194,0.00025585794,0.00974395,0.0008691126,0.16350792,0.0000571867],"about_ca_topic_score_codex":0.00063354825,"about_ca_topic_score_gemma":0.0011143363,"teacher_disagreement_score":0.001892778,"about_ca_system_score_codex":0.0002613009,"about_ca_system_score_gemma":0.00034951954,"threshold_uncertainty_score":0.004157841},"labels":[],"label_agreement":null},{"id":"W1980610830","doi":"10.1038/modpathol.2012.106","title":"Reproducibility of histopathological subtypes and invasion in pulmonary adenocarcinoma. An international interobserver study","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":241,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network; Christie (Canada)","funders":"National Cancer Institute","keywords":"Subtyping; Adenocarcinoma; Pulmonary adenocarcinoma; Kappa; Medicine; Pathology; Reproducibility; Concordance; Radiology; Cancer; Internal medicine; Computer science; Statistics","score_opus":0.06127875614968012,"score_gpt":0.3257190054160126,"score_spread":0.26444024926633247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980610830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818778,0.0023414646,0.008779819,0.00006843833,0.00014124588,0.00006802902,0.00028878756,0.00007942733,0.0063549294],"genre_scores_gemma":[0.9980258,0.00015117612,0.0011207056,0.00002282035,0.000039810027,0.00002330351,0.00024650773,0.00004291055,0.00032692557],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9812402,0.008994487,0.0020819418,0.003296887,0.0036512308,0.00073529937],"domain_scores_gemma":[0.9186449,0.045311593,0.0067478074,0.019381493,0.008793073,0.0011210872],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.02761357,0.0006080006,0.0005842965,0.0024198603,0.00086324255,0.0014175052,0.0009849605,0.00066971517,0.00097653316],"category_scores_gemma":[0.0431804,0.0006004114,0.0010735113,0.0012256952,0.0019299511,0.0012326222,0.0017109751,0.00066055637,0.0005015547],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001313213,0.00007484467,0.96323526,0.000097064534,0.00066921505,0.00013770415,0.0023913472,0.0006969342,0.005278848,0.0002762502,0.0003298536,0.025499364],"study_design_scores_gemma":[0.000035008914,0.00029766542,0.99061334,0.00004105936,0.0005612056,0.0010649515,0.0008253921,0.0018001857,0.002878198,0.00037810853,0.0014603256,0.000044579505],"about_ca_topic_score_codex":0.0019544826,"about_ca_topic_score_gemma":0.003275594,"teacher_disagreement_score":0.9723864,"about_ca_system_score_codex":0.00052474637,"about_ca_system_score_gemma":0.0004083805,"threshold_uncertainty_score":0.14603621},"labels":[{"model":"gemma","categories":["metaresearch"],"domain":"reproducibility","study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":["metaresearch"],"domain":"reproducibility","study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"medium"}],"label_agreement":"agree"},{"id":"W1983201610","doi":"10.1038/modpathol.2008.22","title":"Reply to Perner and Rubin","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; BC Cancer Agency","funders":"","keywords":"Erg; Fish <Actinopterygii>; Fluorescence in situ hybridization; Chromatin; Confusion; Figure–ground; Biology; Chromosome; Genetics; DNA; Neuroscience; Retina; Psychology; Psychoanalysis; Gene; Fishery","score_opus":0.04586448223097087,"score_gpt":0.3221450143782009,"score_spread":0.27628053214723003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983201610","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000047280282,0.0026433836,0.000044720335,0.96353424,0.03333632,0.000002720167,0.000014555598,0.00000880442,0.0003679646],"genre_scores_gemma":[0.0006564805,0.001031738,0.000069169444,0.96118414,0.03548253,0.000010546492,0.000009701523,0.000013430546,0.0015423042],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9935155,0.0018674883,0.0008752992,0.0010542719,0.0019534936,0.0007340279],"domain_scores_gemma":[0.9579551,0.02694429,0.0020591363,0.0018385552,0.008140866,0.003062065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01117878,0.0014511503,0.0030684697,0.0021303927,0.0050184038,0.006461959,0.0050302823,0.074137494,0.008823332],"category_scores_gemma":[0.076529555,0.0015188132,0.0020015961,0.0019028336,0.008316777,0.009757297,0.0059518227,0.083550386,0.0077734753],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029435732,0.0000067076544,0.00008358067,0.000055081156,0.000016309279,0.00013574804,0.0000720439,0.000019589155,0.000032260086,0.001643345,0.9953406,0.002565394],"study_design_scores_gemma":[0.00008605092,0.00003107464,0.00057725894,0.0004457811,0.000058122157,0.0010361084,0.00063089386,0.000116335206,0.00015574023,0.012022547,0.98474956,0.00009054873],"about_ca_topic_score_codex":0.0031443047,"about_ca_topic_score_gemma":0.004849152,"teacher_disagreement_score":0.074137494,"about_ca_system_score_codex":0.0052051563,"about_ca_system_score_gemma":0.004720284,"threshold_uncertainty_score":0.0591197},"labels":[],"label_agreement":null},{"id":"W1983208610","doi":"10.1038/modpathol.2009.176","title":"D2-40, a novel immunohistochemical marker in differentiating dermatofibroma from dermatofibrosarcoma protuberans","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Dermatofibrosarcoma protuberans; Dermatofibroma; CD34; Pathology; Factor XIIIa; Immunohistochemistry; GiST; Immunostaining; Medicine; Fibroma; Dermatopathology; Solitary fibrous tumor; Biology; Stromal cell","score_opus":0.012625559106357816,"score_gpt":0.2594365710704964,"score_spread":0.24681101196413857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983208610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98307335,0.005657417,0.0040382952,0.0001920323,0.000062256426,0.000049838873,0.00012370877,0.00007591726,0.00672709],"genre_scores_gemma":[0.99133974,0.0016524137,0.0052624424,0.000040558585,0.000056904606,0.000035710385,0.00023784945,0.000012548633,0.0013617894],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997999,0.00002733712,0.00002679585,0.000037653448,0.000047901834,0.00006035383],"domain_scores_gemma":[0.99977356,0.000052278545,0.000032945893,0.000024336605,0.00005320827,0.00006373798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005220474,0.0003736606,0.00022225037,0.0017787988,0.00032430812,0.0005557537,0.00035370098,0.00062842574,0.0010972295],"category_scores_gemma":[0.00044925124,0.00029243762,0.00017823103,0.00051918905,0.0004604446,0.00084708864,0.0004356262,0.00037338497,0.00071054004],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011700133,0.00018981314,0.03754149,0.00029693087,0.000061588406,0.014152757,0.00018929035,0.00025176632,0.9098811,0.0007700523,0.00059652247,0.03489865],"study_design_scores_gemma":[0.00040152052,0.0014648424,0.14492112,0.00011802807,0.0004590054,0.17592083,0.00087957917,0.012258658,0.6219062,0.0030642925,0.038506933,0.00009898361],"about_ca_topic_score_codex":0.00046123617,"about_ca_topic_score_gemma":0.0006456994,"teacher_disagreement_score":0.0017787988,"about_ca_system_score_codex":0.00031261612,"about_ca_system_score_gemma":0.0002883303,"threshold_uncertainty_score":0.0036706328},"labels":[],"label_agreement":null},{"id":"W1984240217","doi":"10.1038/modpathol.2008.206","title":"IGF2BP3 (IMP3) expression is a marker of unfavorable prognosis in ovarian carcinoma of clear cell subtype","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":137,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Vancouver General Hospital; Royal Alexandra Hospital; BC Cancer Agency","funders":"National Cancer Institute; Eli Lilly Canada; Michael Smith Health Research BC; Sanofi; BC Cancer Agency; Eli Lilly and Company","keywords":"Immunohistochemistry; Medicine; Biomarker; Serous carcinoma; Ovarian carcinoma; Oncology; Serous fluid; Carcinoma; Confidence interval; Pathology; Clear cell; Internal medicine; Tissue microarray; Ovarian cancer; Cancer; Biology","score_opus":0.01592418245725394,"score_gpt":0.2552796615832286,"score_spread":0.23935547912597469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984240217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979139,0.000637128,0.00039148744,0.000058565995,0.00000872875,0.0000053139365,0.00024597195,0.000012448721,0.0007264382],"genre_scores_gemma":[0.99907494,0.0001366515,0.00023348228,0.000018745939,0.000010636854,0.0000055069927,0.00027258293,0.0000028639026,0.0002446283],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99989223,0.00001723777,0.00000998568,0.000017293192,0.00003533791,0.000027926051],"domain_scores_gemma":[0.99963677,0.000079441714,0.0001267635,0.00001828868,0.000067509005,0.000071103466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027267795,0.00012940668,0.0002305564,0.0007480693,0.00029106604,0.00036723472,0.00019959112,0.00026824157,0.0011738501],"category_scores_gemma":[0.0007520918,0.00013226818,0.00016610055,0.0006866153,0.0002859001,0.00017839918,0.00024709335,0.00033056847,0.00018862796],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010598352,0.000022732329,0.9600902,0.000028202026,0.000037100574,0.0004335268,0.00008167316,0.00007832754,0.032391272,0.000045874214,0.00021134222,0.0055197384],"study_design_scores_gemma":[0.000010973282,0.00008177582,0.9943936,0.0000027331907,0.000029217274,0.0010773846,0.00011885066,0.00037499607,0.003401615,0.00006361617,0.0004411515,0.0000039719857],"about_ca_topic_score_codex":0.0039360463,"about_ca_topic_score_gemma":0.0039508,"teacher_disagreement_score":0.0039360463,"about_ca_system_score_codex":0.0002876848,"about_ca_system_score_gemma":0.00025934956,"threshold_uncertainty_score":0.007826269},"labels":[],"label_agreement":null},{"id":"W1985010884","doi":"10.1097/01.mp.0000057235.65327.40","title":"Cyclin Alterations in Giant Cell Tumor of Bone","year":2003,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Cyclin D1; Cyclin D3; Cyclin D; Cyclin; Biology; Cyclin A; Cyclin B; Cell cycle; Cyclin A2; Staining; Cyclin E; Cancer research; Molecular biology; Cell; Biochemistry; Genetics","score_opus":0.017068746138748186,"score_gpt":0.2658441800219729,"score_spread":0.24877543388322473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985010884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9792447,0.0076840823,0.0013809812,0.00051657093,0.00008452119,0.000033321627,0.00046695783,0.00008892422,0.010499996],"genre_scores_gemma":[0.9976568,0.0009198424,0.0005638647,0.000034409306,0.00004530443,0.000007739986,0.00008415497,0.000009179951,0.00067855854],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999157,0.0000119703145,0.000010934671,0.00001684184,0.000020373069,0.000024113046],"domain_scores_gemma":[0.9996562,0.00014061827,0.0000734302,0.000027023718,0.0000510329,0.0000517357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018391253,0.00023674358,0.0002563963,0.001393416,0.00037109875,0.0003539054,0.0002936902,0.00047304106,0.0020018963],"category_scores_gemma":[0.0006721379,0.00018761755,0.00013816183,0.00067451317,0.0004606955,0.0003469012,0.00021712892,0.00023877926,0.0003862272],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0069819847,0.00012749774,0.17077161,0.0008343207,0.00015673968,0.25620928,0.0006913773,0.0010105356,0.51237863,0.00475849,0.0036704137,0.042409096],"study_design_scores_gemma":[0.0003454272,0.0008208453,0.33184257,0.00005222636,0.00042560417,0.4170677,0.0010799888,0.0032030318,0.2076881,0.0043061716,0.03311059,0.00005773554],"about_ca_topic_score_codex":0.0019481027,"about_ca_topic_score_gemma":0.0022514798,"teacher_disagreement_score":0.0020018963,"about_ca_system_score_codex":0.00043622337,"about_ca_system_score_gemma":0.0003373184,"threshold_uncertainty_score":0.0066969395},"labels":[],"label_agreement":null},{"id":"W1987674332","doi":"10.1038/modpathol.2012.226","title":"FOXL2 molecular testing in ovarian neoplasms: diagnostic approach and procedural guidelines","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Michael Smith Health Research BC","keywords":"Pathology; Medicine; Medical physics","score_opus":0.03884751651708298,"score_gpt":0.28354271846242735,"score_spread":0.24469520194534436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987674332","genre_codex":"commentary","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10479236,0.21713556,0.21906117,0.3458217,0.004101939,0.0012927052,0.00097630074,0.0013783313,0.10543998],"genre_scores_gemma":[0.62657475,0.089285254,0.21730992,0.04570807,0.010404148,0.0009276211,0.0015577434,0.000410711,0.007821785],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99802554,0.0006635724,0.00044033094,0.00024425762,0.0004895,0.0001368281],"domain_scores_gemma":[0.99579275,0.0020044374,0.00038313807,0.00020378607,0.0012589,0.00035688395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005287387,0.00081811094,0.0009923049,0.003481991,0.0011239295,0.0021665124,0.0014543163,0.003240057,0.0015135298],"category_scores_gemma":[0.012415779,0.0004997115,0.0010445009,0.000910921,0.0016396021,0.002313906,0.0012568993,0.004174736,0.000917643],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068093836,0.0004765177,0.17694867,0.0010188635,0.00025754594,0.020293757,0.0011230578,0.0060406933,0.012487266,0.016453072,0.085752435,0.6784672],"study_design_scores_gemma":[0.00046947793,0.0011635047,0.21467413,0.008194076,0.0009877131,0.21695948,0.0049067014,0.03560177,0.02112757,0.10748924,0.38795614,0.00047017913],"about_ca_topic_score_codex":0.0023523418,"about_ca_topic_score_gemma":0.005147588,"teacher_disagreement_score":0.005287387,"about_ca_system_score_codex":0.0014666567,"about_ca_system_score_gemma":0.002347029,"threshold_uncertainty_score":0.027962744},"labels":[],"label_agreement":null},{"id":"W1987735416","doi":"10.1038/modpathol.2013.181","title":"Langerhans cell histiocytosis in acute leukemias of ambiguous or myeloid lineage in adult patients: support for a possible clonal relationship","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Histiocytic Disorders and Treatments","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Langerhans cell histiocytosis; Leukemia; Myeloid leukemia; Acute leukemia; Histiocytosis; Malignant histiocytosis; Pathology; Myeloid; CD117; Immunology; Medicine; Biology; Histiocyte; Cancer research; Stem cell; Disease; Genetics","score_opus":0.018525467226957668,"score_gpt":0.2674258362530733,"score_spread":0.24890036902611565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987735416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99527645,0.00085506233,0.00034791103,0.00017182193,0.000015508322,0.0000144206615,0.000057344503,0.000010780695,0.0032506718],"genre_scores_gemma":[0.9992124,0.0002254312,0.00028629234,0.000043755295,0.00006181647,0.0000047158023,0.00004078835,0.0000023947575,0.0001222733],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999782,0.000061541396,0.00003647894,0.000035192235,0.00003449754,0.000050332874],"domain_scores_gemma":[0.99867517,0.00068636256,0.0002668444,0.00011378707,0.000108372886,0.00014955644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053208193,0.00021368657,0.00022509912,0.0009098801,0.000374522,0.00068805774,0.000441762,0.00062382367,0.0037136322],"category_scores_gemma":[0.0033072366,0.00013504864,0.00013264392,0.00081697083,0.0005260645,0.00069276046,0.00037672478,0.00046735967,0.00044970342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068290747,0.00008855842,0.94191784,0.00005624694,0.000028529064,0.032323867,0.00034530528,0.00013150669,0.009254598,0.001433998,0.0003219586,0.013414815],"study_design_scores_gemma":[0.00011274378,0.00070125883,0.72475684,0.00007602117,0.00016855293,0.25765184,0.0017090244,0.0019131934,0.0060254037,0.002905599,0.0039579337,0.00002159266],"about_ca_topic_score_codex":0.00028727885,"about_ca_topic_score_gemma":0.00031545316,"teacher_disagreement_score":0.0037136322,"about_ca_system_score_codex":0.00015589314,"about_ca_system_score_gemma":0.00022705701,"threshold_uncertainty_score":0.0124233365},"labels":[],"label_agreement":null},{"id":"W1988429312","doi":"10.1038/modpathol.3880543","title":"Monoclonal Antibody D2-40, a New Marker of Lymphatic Endothelium, Reacts with Kaposi's Sarcoma and a Subset of Angiosarcomas","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Vascular Tumors and Angiosarcomas","field":"Medicine","cited_by":596,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Health Sciences Centre; University of Toronto; Women's College Hospital; Sunnybrook Health Science Centre","funders":"","keywords":"Pathology; CD31; Lymphatic system; Lymphatic Endothelium; Endothelium; Sarcoma; Hemangioendothelioma; Glomus tumor; Blood vessel; Medicine; Immunohistochemistry; Biology","score_opus":0.01727239098722564,"score_gpt":0.24195910871014134,"score_spread":0.2246867177229157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988429312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98699605,0.0020083366,0.0028323464,0.00012820073,0.000030361785,0.000025494532,0.00009734283,0.00011640761,0.007765438],"genre_scores_gemma":[0.99321085,0.0013938157,0.0023687591,0.00006459654,0.000052395153,0.000031306008,0.0003550495,0.000014023816,0.0025091653],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998209,0.00001993149,0.000019774532,0.000042372754,0.00003380181,0.00006314148],"domain_scores_gemma":[0.9997054,0.000089265326,0.000049865583,0.000050982966,0.000038275808,0.00006628854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030685798,0.00036968352,0.0002689504,0.0011175568,0.00037466435,0.00035066067,0.00031803804,0.00038971752,0.0016969532],"category_scores_gemma":[0.00039682686,0.0002791271,0.00022182337,0.00047926774,0.00030442225,0.0004558153,0.0004158611,0.00037438888,0.0006669082],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028707788,0.00011581929,0.015507479,0.00011493726,0.000040621977,0.002622527,0.00019285706,0.0001727222,0.9644782,0.0009547112,0.0005204532,0.014992683],"study_design_scores_gemma":[0.00019124047,0.001580621,0.19970748,0.000081320926,0.00029733873,0.09583713,0.000646622,0.0058169016,0.6336767,0.0033918396,0.058693532,0.000079201265],"about_ca_topic_score_codex":0.0004222953,"about_ca_topic_score_gemma":0.0004805864,"teacher_disagreement_score":0.0016969532,"about_ca_system_score_codex":0.00022679067,"about_ca_system_score_gemma":0.00019474108,"threshold_uncertainty_score":0.0056768656},"labels":[],"label_agreement":null},{"id":"W1989035397","doi":"10.1038/modpathol.3800531","title":"Routine immunohistochemical staining for high-molecular weight cytokeratin 34-β and α-methylacyl CoA racemase (P504S) in postirradiation prostate biopsies","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Cytokeratin; Prostate; Pathology; Adenocarcinoma; Immunohistochemistry; Medicine; Prostate cancer; Prostate carcinoma; Biopsy; Internal medicine; Cancer","score_opus":0.011374261153865235,"score_gpt":0.30025372810716994,"score_spread":0.2888794669533047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989035397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9607236,0.008284991,0.016699567,0.00029336323,0.00009906795,0.00021504176,0.0005269059,0.0005793522,0.012578086],"genre_scores_gemma":[0.9730258,0.0043132496,0.015940575,0.0001097011,0.00006743237,0.00012815479,0.00084201805,0.00007851042,0.005494654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998178,0.000034078614,0.000020086125,0.000030681796,0.000049874572,0.00004752116],"domain_scores_gemma":[0.9997806,0.000053454605,0.000025040174,0.00004147349,0.000065701526,0.000033832956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049610005,0.0003647839,0.00023208703,0.001338864,0.00046766005,0.00021159947,0.0003774214,0.00040056772,0.0027995263],"category_scores_gemma":[0.00038594785,0.00034127015,0.0003011436,0.00047121456,0.00031011045,0.00030826105,0.00021788008,0.0004846072,0.00062225776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006943766,0.000059306094,0.011811209,0.00019642261,0.000059142523,0.002368007,0.00014892241,0.000113318194,0.97230613,0.00022891494,0.00030771838,0.011706581],"study_design_scores_gemma":[0.00007701829,0.0015728634,0.22155909,0.000055971224,0.0002899541,0.029240243,0.00045216887,0.0015788965,0.72887135,0.0005845805,0.015688501,0.000029420145],"about_ca_topic_score_codex":0.001281604,"about_ca_topic_score_gemma":0.0022633474,"teacher_disagreement_score":0.0027995263,"about_ca_system_score_codex":0.0002022029,"about_ca_system_score_gemma":0.00021137486,"threshold_uncertainty_score":0.00936538},"labels":[],"label_agreement":null},{"id":"W1989261655","doi":"10.1038/modpathol.3800104","title":"Promoter methylation and protein expression of the E-cadherin gene in the clinicopathologic assessment of adenoid cystic carcinoma","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Manitoba","keywords":"Adenoid cystic carcinoma; Pathology; Microdissection; Adenoid; Carcinoma; DNA methylation; Methylation; Biology; Cancer research; Cadherin; Gene expression; Gene; Medicine; Cell; Genetics","score_opus":0.030985320772020132,"score_gpt":0.3100928201817343,"score_spread":0.27910749940971413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989261655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987154,0.00037902905,0.0001810614,0.00002849581,0.0000030456201,0.0000040830137,0.000028376377,0.0000042689426,0.0006562598],"genre_scores_gemma":[0.9996418,0.00009437522,0.000105805346,0.000005780074,0.0000043873124,0.0000026279918,0.000024630166,7.95129e-7,0.00011978356],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99977976,0.000072289055,0.000026668326,0.000028220225,0.00006115244,0.00003185179],"domain_scores_gemma":[0.99952626,0.00019745842,0.00008834415,0.000023465936,0.00009769159,0.000066853456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004758942,0.00015053066,0.00018296036,0.0011719045,0.00023268594,0.00033845002,0.00016303336,0.00024971607,0.0006082701],"category_scores_gemma":[0.0016340759,0.00016297726,0.000098972865,0.000526169,0.0003953618,0.00029834476,0.00019109593,0.00028201146,0.00013371039],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058542384,0.00003466922,0.9576572,0.000016970003,0.00002437717,0.00086264336,0.00020925012,0.00012056078,0.033746082,0.000068834255,0.00006041296,0.006613514],"study_design_scores_gemma":[0.0000065953795,0.00013965022,0.98843914,0.000003731429,0.00004037279,0.0033931853,0.00036014087,0.00074987113,0.006381708,0.00009820422,0.00038120092,0.0000063589346],"about_ca_topic_score_codex":0.0015947616,"about_ca_topic_score_gemma":0.00188184,"teacher_disagreement_score":0.0015947616,"about_ca_system_score_codex":0.00024219681,"about_ca_system_score_gemma":0.00020562278,"threshold_uncertainty_score":0.0031710267},"labels":[],"label_agreement":null},{"id":"W1989354370","doi":"10.1038/modpathol.2009.89","title":"Candidate serous cancer precursors in fallopian tube epithelium of BRCA1/2 mutation carriers","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":214,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"University Health Network; Canary Foundation","keywords":"BRCA mutation; Serous carcinoma; Serous fluid; Fallopian tube; Fallopian tube cancer; Medicine; Pathology; Ovarian cancer; Cancer; Lynch syndrome; Carcinoma; Immunostaining; Malignancy; Germline mutation; Oncology; Internal medicine; Mutation; Immunohistochemistry; Biology; Gynecology; Colorectal cancer","score_opus":0.012606111060079337,"score_gpt":0.2885385424456439,"score_spread":0.27593243138556456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989354370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986539,0.0002830705,0.00010589976,0.000032904634,0.000011307916,0.00001041158,0.000055968558,0.000011500008,0.0008350476],"genre_scores_gemma":[0.99927026,0.00011622242,0.00023474172,0.000016432865,0.000013350222,0.000005298206,0.0000669854,0.000004826045,0.00027185938],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997862,0.000044128003,0.000023592664,0.00003532463,0.00004151266,0.00006934402],"domain_scores_gemma":[0.9991441,0.00033892546,0.0001613794,0.000049462717,0.00008715427,0.00021889717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036363237,0.00040005677,0.00037415943,0.0028424868,0.0007329394,0.0009630821,0.00044203832,0.000696686,0.004710556],"category_scores_gemma":[0.0032771402,0.00032451627,0.00027553958,0.00059554237,0.0004458833,0.0005491716,0.0005013606,0.00031355215,0.00048643365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00252723,0.000089466026,0.9200324,0.000062533225,0.000024803172,0.04711951,0.0006095947,0.00017405013,0.02042337,0.00029831083,0.0002765085,0.008362214],"study_design_scores_gemma":[0.000083271276,0.0009313302,0.83843195,0.000048005044,0.00014760728,0.13921848,0.0023662657,0.0017136703,0.014352026,0.0007480715,0.0019278111,0.00003147969],"about_ca_topic_score_codex":0.0011887907,"about_ca_topic_score_gemma":0.00093520444,"teacher_disagreement_score":0.004710556,"about_ca_system_score_codex":0.0002284888,"about_ca_system_score_gemma":0.0003010087,"threshold_uncertainty_score":0.015758395},"labels":[],"label_agreement":null},{"id":"W1990517558","doi":"10.1038/modpathol.3800632","title":"Pathway-specific apoptotic gene expression profiling in chronic lymphocytic leukemia and follicular lymphoma","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Cancer Institute","keywords":"Chronic lymphocytic leukemia; Follicular lymphoma; MCL1; Leukemia; Survivin; Lymphoma; Pathology; CD20; Gene expression profiling; Cancer research; Medicine; Biology; Immunology; Gene expression; Gene; Internal medicine; Downregulation and upregulation; Cancer","score_opus":0.016937417930110943,"score_gpt":0.25949687131409876,"score_spread":0.24255945338398782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990517558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947602,0.0021950994,0.0012683154,0.000044802044,0.000008094799,0.000019604937,0.0006623618,0.000016532393,0.0010250747],"genre_scores_gemma":[0.9948132,0.0009348359,0.0016739317,0.00005266479,0.000008088416,0.00003887719,0.0011590476,0.000006716669,0.0013127038],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998572,0.000017489287,0.000008148723,0.00003132065,0.000033385713,0.00005248815],"domain_scores_gemma":[0.99991274,0.000019449537,0.000019155908,0.0000089006135,0.000019980787,0.000019692976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012770071,0.00010368105,0.0001866204,0.0006411521,0.00032680418,0.00032912038,0.00013799699,0.00021034045,0.0013643088],"category_scores_gemma":[0.00018261856,0.00009076587,0.00013224232,0.00051524775,0.00016661544,0.00021800312,0.00017602666,0.00025384425,0.00021322008],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011164967,0.000039170394,0.010938888,0.00007834763,0.000017648461,0.00009740622,0.00007576243,0.000058605394,0.98077375,0.00017398318,0.00008641176,0.0065435558],"study_design_scores_gemma":[0.00016864052,0.0013562534,0.41253918,0.000038745802,0.00016239342,0.0043133716,0.00096082006,0.0022934692,0.564116,0.00073055265,0.013299821,0.00002070204],"about_ca_topic_score_codex":0.00095336826,"about_ca_topic_score_gemma":0.0017173061,"teacher_disagreement_score":0.0013643088,"about_ca_system_score_codex":0.00025169333,"about_ca_system_score_gemma":0.00022600881,"threshold_uncertainty_score":0.0045641065},"labels":[],"label_agreement":null},{"id":"W1990701421","doi":"10.1038/modpathol.2010.89","title":"TMPRSS2-ERG gene fusion in transition zone prostate cancer","year":2010,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"TMPRSS2; Prostate cancer; Fusion gene; Prostate; Medicine; Erg; Cancer; Oncology; Pathology; Internal medicine; Biology; Gene; Ophthalmology; Genetics","score_opus":0.023921825058036368,"score_gpt":0.30705059185555394,"score_spread":0.2831287667975176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990701421","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.025444733,0.0067420835,0.000854955,0.91027516,0.029877853,0.00006656279,0.00021641319,0.00014324447,0.026378946],"genre_scores_gemma":[0.30046573,0.008251984,0.0018133686,0.54359967,0.10497847,0.000097452416,0.00029993147,0.000106580126,0.040386748],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99914014,0.00021456424,0.00009597645,0.00011019275,0.00019139546,0.0002476969],"domain_scores_gemma":[0.9980568,0.0011302622,0.00016755176,0.000083343126,0.00022368491,0.00033834088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008837007,0.00071831007,0.0013225079,0.0008583353,0.002318329,0.001879844,0.0014198876,0.0341596,0.0039038458],"category_scores_gemma":[0.00684126,0.00073021726,0.0014049715,0.0008298347,0.0019281693,0.0019194083,0.00088827626,0.01636187,0.0021527943],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043133617,0.00012915315,0.0057206093,0.00017569016,0.000057320223,0.6102918,0.00025323714,0.00069449976,0.002039748,0.0051109134,0.35904709,0.016048627],"study_design_scores_gemma":[0.0003811094,0.0004767831,0.010945064,0.0003646424,0.00023993052,0.71949047,0.00088955025,0.0058703097,0.00300237,0.013952683,0.24424657,0.00014053605],"about_ca_topic_score_codex":0.004076529,"about_ca_topic_score_gemma":0.007319698,"teacher_disagreement_score":0.0341596,"about_ca_system_score_codex":0.005362111,"about_ca_system_score_gemma":0.001767989,"threshold_uncertainty_score":0.038905025},"labels":[],"label_agreement":null},{"id":"W1990829939","doi":"10.1038/modpathol.3800118","title":"Analysis of epidermal growth factor receptor and activated epidermal growth factor receptor expression in pituitary adenomas and carcinomas","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"National Cancer Institute; National Institutes of Health","keywords":"Epidermal growth factor receptor; Epidermal growth factor; Biology; Growth factor receptor; Growth factor receptor inhibitor; Internal medicine; Endocrinology; TGF alpha; Cancer research; Receptor expression; Receptor; Medicine","score_opus":0.03998788086667816,"score_gpt":0.31347896644590045,"score_spread":0.2734910855792223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990829939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99463934,0.0017913197,0.0007418709,0.000039645747,0.000016529675,0.000015205909,0.00024670103,0.000021564805,0.0024879584],"genre_scores_gemma":[0.99726784,0.00062742946,0.00045679908,0.000017498078,0.000012995421,0.0000115753655,0.00033273906,0.000008301276,0.0012649536],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999856,0.000016155254,0.000012307605,0.000019530939,0.00004547719,0.000050491984],"domain_scores_gemma":[0.99978,0.00008973239,0.000019260116,0.000013877383,0.000043849766,0.00005323907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002032329,0.00014850109,0.00020458474,0.0010733155,0.0002785566,0.00033275905,0.00016302652,0.00018277082,0.0013461848],"category_scores_gemma":[0.0003517116,0.0001614642,0.00017812058,0.00053519994,0.0003610059,0.00019974283,0.00019294936,0.000263001,0.00025193536],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029571645,0.000035943052,0.016313432,0.00010401617,0.00003479407,0.0018606189,0.00024011824,0.0000822383,0.97299623,0.00029600944,0.000088636916,0.0049908767],"study_design_scores_gemma":[0.00011694895,0.001296514,0.48502824,0.000018137842,0.00021422032,0.013376689,0.0014568204,0.0013058255,0.4859043,0.00045257597,0.010794278,0.000035540088],"about_ca_topic_score_codex":0.0042597856,"about_ca_topic_score_gemma":0.00282979,"teacher_disagreement_score":0.0042597856,"about_ca_system_score_codex":0.00027524502,"about_ca_system_score_gemma":0.00028327908,"threshold_uncertainty_score":0.008469999},"labels":[],"label_agreement":null},{"id":"W1991635780","doi":"10.1038/modpathol.2013.211","title":"Comparison of molecular abnormalities in vulvar and vaginal melanomas","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Vulva; Neuroblastoma RAS viral oncogene homolog; Vagina; Pathology; Pagetoid; HRAS; Biology; CD117; Melanoma; Fluorescence in situ hybridization; Mucosal melanoma; Mutation; Immunohistochemistry; Medicine; Cancer research; Gene; Anatomy; KRAS; CD34; Genetics","score_opus":0.015937118224458653,"score_gpt":0.284316694683004,"score_spread":0.2683795764585454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991635780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951114,0.0019237264,0.00036818782,0.000069105736,0.000025033334,0.000009098061,0.0002290829,0.000017468334,0.0022468506],"genre_scores_gemma":[0.9983986,0.00057970174,0.0003600229,0.000022457247,0.000015603955,0.0000058130163,0.00025335848,0.000009003779,0.00035535835],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99942374,0.00009805071,0.00007615972,0.000105018145,0.00016531823,0.00013176749],"domain_scores_gemma":[0.9985808,0.000569249,0.00036534853,0.00008677805,0.00021926526,0.00017860903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008149228,0.00021043072,0.00023911576,0.004040529,0.00030979633,0.0010438552,0.00038064615,0.0004206933,0.0030448067],"category_scores_gemma":[0.0033931034,0.00017245246,0.00032907174,0.0009671228,0.00031447032,0.00053828955,0.00051112805,0.00032167658,0.0004119164],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021270292,0.000068753216,0.9151667,0.00010774302,0.00015419956,0.001590415,0.00023815387,0.00022868809,0.049075264,0.0003278691,0.00021826568,0.030696992],"study_design_scores_gemma":[0.000012019348,0.00018384184,0.9864288,0.000025767742,0.00008391766,0.005489376,0.00043162584,0.00042248817,0.005542003,0.00017037944,0.0012031667,0.000006549531],"about_ca_topic_score_codex":0.000795061,"about_ca_topic_score_gemma":0.0010005726,"teacher_disagreement_score":0.004040529,"about_ca_system_score_codex":0.00032064167,"about_ca_system_score_gemma":0.00015779998,"threshold_uncertainty_score":0.010185897},"labels":[],"label_agreement":null},{"id":"W1992174650","doi":"10.1097/01.mp.0000039571.02827.ce","title":"Tissue Microarrays Are an Effective Quality Assurance Tool for Diagnostic Immunohistochemistry","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":151,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Immunohistochemistry; Tissue microarray; Staining; Pathology; Immunostaining; Antigen; Antigen retrieval; Placental alkaline phosphatase; Biology; Alkaline phosphatase; Medicine; Immunology","score_opus":0.0344676654126569,"score_gpt":0.35823566777534877,"score_spread":0.3237680023626919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992174650","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034963343,0.006640859,0.9409957,0.00072771765,0.0006497205,0.0010998452,0.0026037854,0.0077383816,0.0045806305],"genre_scores_gemma":[0.103928626,0.0033403994,0.88003075,0.0006566508,0.00036454172,0.0019512344,0.0053165215,0.00086480234,0.0035463916],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.98162395,0.008106254,0.0017323748,0.0018091736,0.0064021903,0.00032601587],"domain_scores_gemma":[0.9800397,0.007733581,0.002045538,0.004798182,0.005066723,0.0003162059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.016139798,0.0011419512,0.001807056,0.0042900695,0.000917981,0.0018913407,0.0018389454,0.0011320879,0.0047459044],"category_scores_gemma":[0.017152207,0.0015061896,0.0006905359,0.0022765636,0.00067421363,0.001453469,0.0011704748,0.0010866822,0.0046363217],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005900053,0.00015332301,0.00963624,0.0010884725,0.00022945915,0.0004775535,0.0003551495,0.0018527199,0.80799186,0.0017877885,0.0080807265,0.16775669],"study_design_scores_gemma":[0.00022838333,0.0014003523,0.054638706,0.00047888074,0.00057681306,0.004646514,0.00041249397,0.021910127,0.7140991,0.0052838493,0.19609138,0.00023335087],"about_ca_topic_score_codex":0.0004546196,"about_ca_topic_score_gemma":0.0008273886,"teacher_disagreement_score":0.016139798,"about_ca_system_score_codex":0.00056942925,"about_ca_system_score_gemma":0.0006315509,"threshold_uncertainty_score":0.085356414},"labels":[],"label_agreement":null},{"id":"W1993925306","doi":"10.1038/modpathol.2013.107","title":"Ovarian and endometrial endometrioid carcinomas have distinct CTNNB1 and PTEN mutation profiles","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":292,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Princess Margaret Cancer Centre; University of British Columbia; BC Cancer Agency","funders":"National Cancer Institute; BC Cancer Foundation","keywords":"PTEN; Pathology; Ovarian carcinomas; Medicine; Carcinoma; Biology; Cancer research; Internal medicine; Ovarian carcinoma; Ovarian cancer; PI3K/AKT/mTOR pathway; Cancer; Genetics","score_opus":0.013109224475250486,"score_gpt":0.24129664543893417,"score_spread":0.2281874209636837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993925306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995033,0.0011153249,0.000873792,0.00008616203,0.000010877239,0.000015292275,0.0003933328,0.00002614116,0.00244616],"genre_scores_gemma":[0.9972434,0.00063864933,0.0007239751,0.000041643416,0.000010542751,0.000013575945,0.0004727308,0.000017581047,0.00083783193],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997104,0.00002822357,0.00003815191,0.000056183795,0.00008827537,0.00007871925],"domain_scores_gemma":[0.99953187,0.00010820136,0.00014307024,0.000049467195,0.00007290475,0.000094448566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036778816,0.00029019848,0.00026682846,0.0017812348,0.00026103322,0.00065619394,0.0002489378,0.0003571012,0.0019133841],"category_scores_gemma":[0.0012589816,0.00022516825,0.00020275098,0.0009933264,0.00048996357,0.00034656355,0.0006217062,0.00026299196,0.00048130206],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024601112,0.000061088474,0.53401464,0.0001468283,0.00013282606,0.006214488,0.00074838137,0.00023778735,0.42221892,0.0018060596,0.0003715141,0.031587355],"study_design_scores_gemma":[0.000031643624,0.00017074794,0.92760795,0.000022869495,0.00013081591,0.027584985,0.0007594724,0.0005993814,0.038133536,0.0010427848,0.0038922234,0.000023663033],"about_ca_topic_score_codex":0.00096409,"about_ca_topic_score_gemma":0.0013141794,"teacher_disagreement_score":0.0019133841,"about_ca_system_score_codex":0.0003044719,"about_ca_system_score_gemma":0.00022026965,"threshold_uncertainty_score":0.006400943},"labels":[],"label_agreement":null},{"id":"W1994447590","doi":"10.1097/01.mp.0000024288.63070.4f","title":"An Efficient Method for the Assessment of DNA Quality of Archival Microdissected Specimens","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research","keywords":"RAPD; Polymerase chain reaction; DNA; Biology; Molecular biology; DNA extraction; Multiple displacement amplification; Gene; Genetics; Medicine; Population; Genetic diversity","score_opus":0.0325296911364834,"score_gpt":0.3777228209100408,"score_spread":0.3451931297735574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994447590","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09939211,0.010530326,0.87737375,0.0006441333,0.0004017911,0.002446535,0.0020558238,0.0015129074,0.0056426167],"genre_scores_gemma":[0.08265378,0.005706029,0.9045707,0.00027953173,0.00008419423,0.001606506,0.0017979534,0.00013018228,0.003171099],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731016,0.0005663282,0.0003901172,0.00055454107,0.0010849815,0.000093941075],"domain_scores_gemma":[0.9966529,0.0010259062,0.00043355918,0.00064673607,0.0010972987,0.00014357944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028436182,0.0008355284,0.00080803817,0.0043788324,0.00068870716,0.0006690137,0.00082698505,0.0012030452,0.0031581633],"category_scores_gemma":[0.003706316,0.00069524476,0.00036214272,0.001733533,0.0010386929,0.00076898333,0.000791908,0.0012170433,0.0024939268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064941574,0.000050307164,0.0027823579,0.0002376493,0.000024494266,0.00012602971,0.00008584093,0.000072662,0.96306884,0.0002922208,0.00028731007,0.03290734],"study_design_scores_gemma":[0.00006278514,0.0009339301,0.05138895,0.00024790148,0.00023057054,0.005963072,0.00027852674,0.0032009766,0.9067554,0.0012107239,0.029654572,0.00007260021],"about_ca_topic_score_codex":0.00041995186,"about_ca_topic_score_gemma":0.0015923596,"teacher_disagreement_score":0.0043788324,"about_ca_system_score_codex":0.00039238093,"about_ca_system_score_gemma":0.00055799866,"threshold_uncertainty_score":0.015038669},"labels":[],"label_agreement":null},{"id":"W1995694958","doi":"10.1038/modpathol.2011.157","title":"Histone deacetylase 1 and 2 in mesenchymal tumors","year":2011,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Cancer research; Epigenetics; Biology; HDAC1; Histone deacetylase; Histone deacetylase 2; Mesenchymal stem cell; Chromatin; Histone; Pathology; Gene; Cell biology; Medicine; Genetics","score_opus":0.02214213573929831,"score_gpt":0.2779848022489432,"score_spread":0.2558426665096449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995694958","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2631616,0.701415,0.008223611,0.006290135,0.0012384565,0.000040123672,0.00033710743,0.0001941236,0.019099798],"genre_scores_gemma":[0.77069426,0.2062617,0.0034961866,0.0009948416,0.0013707521,0.000038759663,0.0003632717,0.00002259193,0.01675766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999472,0.0000109574485,0.0000052113164,0.000009457611,0.00001566875,0.000011482299],"domain_scores_gemma":[0.99995124,0.000013611925,0.000010164697,0.000005015692,0.0000068726117,0.000013038854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031644083,0.00026770605,0.00018625364,0.000686883,0.00016745878,0.00030432126,0.0003046165,0.00037100696,0.00096033956],"category_scores_gemma":[0.00015472929,0.00016889334,0.00015901618,0.0003768383,0.00039806525,0.00034803874,0.00019994749,0.0006803838,0.00024433507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006586728,0.0004940923,0.019820428,0.001314791,0.00021387453,0.0064246734,0.00027408815,0.00255323,0.5423643,0.060496964,0.012199162,0.3472576],"study_design_scores_gemma":[0.0005289947,0.0021110307,0.093051724,0.00020521772,0.0005040911,0.030118717,0.00036656306,0.003920321,0.4593128,0.035664983,0.3741072,0.00010845571],"about_ca_topic_score_codex":0.0009612202,"about_ca_topic_score_gemma":0.0012363289,"teacher_disagreement_score":0.0009612202,"about_ca_system_score_codex":0.0004597527,"about_ca_system_score_gemma":0.00034876098,"threshold_uncertainty_score":0.0033357143},"labels":[],"label_agreement":null},{"id":"W1996441031","doi":"10.1038/modpathol.3880531","title":"Markers of Proliferative Activity Are Predictors of Patient Outcome for Low-Grade Endometrioid Adenocarcinoma But Not Papillary Serous Carcinoma of Endometrium","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency","funders":"","keywords":"Mitotic index; Serous fluid; Pathology; Medicine; Serous carcinoma; Carcinoma; Immunostaining; Clear cell carcinoma; Endometrial hyperplasia; Stage (stratigraphy); Adenocarcinoma; Endometrium; Cancer; Immunohistochemistry; Internal medicine; Biology; Mitosis; Ovarian cancer","score_opus":0.04127663388790617,"score_gpt":0.2714036634725172,"score_spread":0.23012702958461104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996441031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99782157,0.0008978218,0.00014525735,0.0002252218,0.000028901111,0.000004176226,0.00013323083,0.000008334355,0.00073542085],"genre_scores_gemma":[0.999401,0.0001791011,0.000074163974,0.000025454901,0.000040463594,0.0000027842289,0.0001401973,0.0000021734609,0.00013459184],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997496,0.00009788728,0.000031077154,0.000027163245,0.00004084957,0.00005339171],"domain_scores_gemma":[0.9937656,0.0031996141,0.001597876,0.00026478278,0.0002527862,0.00091929274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007121483,0.00030104254,0.00047908915,0.0006314492,0.00040663336,0.0007395222,0.0004167292,0.0007490291,0.0014431084],"category_scores_gemma":[0.006654798,0.00021895781,0.00039938308,0.0008526199,0.0004057364,0.0005648373,0.0003176305,0.0010411167,0.0002535951],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006041555,0.000032090677,0.9959578,0.000013280396,0.00005000072,0.00016285678,0.000034267534,0.00005347357,0.00059485756,0.000019349194,0.00007230525,0.0024055627],"study_design_scores_gemma":[0.000022865876,0.0003008182,0.9970733,0.000008329162,0.00015574692,0.0010580408,0.00012039001,0.0005679721,0.00032717,0.00014124447,0.00021697996,0.0000070596443],"about_ca_topic_score_codex":0.0005985182,"about_ca_topic_score_gemma":0.00095012557,"teacher_disagreement_score":0.0014431084,"about_ca_system_score_codex":0.00016765259,"about_ca_system_score_gemma":0.0003569725,"threshold_uncertainty_score":0.004827738},"labels":[],"label_agreement":null},{"id":"W1998403263","doi":"10.1038/modpathol.2012.171","title":"Restrictive allograft syndrome post lung transplantation is characterized by pleuroparenchymal fibroelastosis","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Transplantation: Methods and Outcomes","field":"Medicine","cited_by":233,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Endocardial fibroelastosis; Pathology; Lung transplantation; Lung; Parenchyma; Lung biopsy; Transplantation; Alveolar Wall; Pulmonary fibrosis; Biopsy; Fibrosis; Surgery; Internal medicine","score_opus":0.015588505170091228,"score_gpt":0.2845281881870642,"score_spread":0.26893968301697296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998403263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98876065,0.0026631271,0.0020501008,0.00033339683,0.00006511444,0.00004254431,0.00008420312,0.00007956605,0.005921422],"genre_scores_gemma":[0.9987834,0.00039272456,0.00033748208,0.000060569037,0.00010423636,0.000008686781,0.000054403255,0.0000043477567,0.00025416198],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99965227,0.00008035977,0.00003879668,0.00005264451,0.00007881051,0.0000971006],"domain_scores_gemma":[0.9991135,0.00032064813,0.00026511372,0.00008733549,0.000050281426,0.00016306195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044331647,0.00053457665,0.00047248587,0.0011676224,0.00036656545,0.00041644965,0.00042132862,0.0005796335,0.0015546785],"category_scores_gemma":[0.0014098093,0.0001843267,0.00028729392,0.0004934547,0.000816209,0.0006683736,0.0005103163,0.00061273907,0.00023719115],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007172786,0.00025890293,0.46405867,0.00016508989,0.000072608214,0.48081037,0.00030940518,0.00014926311,0.02663796,0.0015905017,0.0004123461,0.024817681],"study_design_scores_gemma":[0.000025682044,0.00034542833,0.29474813,0.000025081257,0.00005303093,0.6998589,0.00024944454,0.00038673743,0.0031404868,0.0005002569,0.0006519971,0.000014809984],"about_ca_topic_score_codex":0.00020811672,"about_ca_topic_score_gemma":0.00027864688,"teacher_disagreement_score":0.0015546785,"about_ca_system_score_codex":0.00018883689,"about_ca_system_score_gemma":0.000332932,"threshold_uncertainty_score":0.005200863},"labels":[],"label_agreement":null},{"id":"W1998878219","doi":"10.1038/modpathol.3800754","title":"Detection of tyrosinase mRNA in the sentinel lymph nodes of melanoma patients is not a predictor of short-term disease recurrence","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Capital District Health Authority","funders":"Dalhousie University","keywords":"Medicine; Breslow Thickness; Lymph; Histopathology; Sentinel lymph node; Melanoma; Pathology; Metastasis; Lymph node; Micrometastasis; Sentinel node; Dissection (medical); Internal medicine; Gastroenterology; Cancer; Radiology; Breast cancer","score_opus":0.01782614851582466,"score_gpt":0.2610671893354169,"score_spread":0.24324104081959225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998878219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991518,0.00035363898,0.00008201641,0.000043587846,0.000011218331,0.0000018056357,0.00002786402,0.000002943472,0.00032506222],"genre_scores_gemma":[0.9996846,0.000072535746,0.000040422423,0.000015966936,0.0000143559355,0.0000019207132,0.000042545984,0.000001256739,0.00012661985],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998785,0.000024291598,0.000011742516,0.000022104385,0.000031699474,0.00003153418],"domain_scores_gemma":[0.9984262,0.0006928798,0.0004289128,0.00007539059,0.00014018056,0.00023639065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027555955,0.00013113942,0.00030196065,0.00028632075,0.00016930062,0.0003089607,0.00014247002,0.0003073924,0.0013735102],"category_scores_gemma":[0.0017469499,0.00013772107,0.00016681096,0.0001804826,0.00024245582,0.0003273333,0.00011049974,0.00039734962,0.00018716727],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005289367,0.000042218577,0.9773417,0.000022189017,0.000027653154,0.0004997934,0.00006296172,0.000052807907,0.017678173,0.000012279476,0.00007586599,0.0036554108],"study_design_scores_gemma":[0.000010402476,0.00057651405,0.9927094,0.0000064879428,0.000058277383,0.002958956,0.00019278207,0.0004171482,0.0027866615,0.000044958695,0.00023416501,0.000004281248],"about_ca_topic_score_codex":0.00048674233,"about_ca_topic_score_gemma":0.0007372743,"teacher_disagreement_score":0.0013735102,"about_ca_system_score_codex":0.00010830043,"about_ca_system_score_gemma":0.00015968931,"threshold_uncertainty_score":0.004594803},"labels":[],"label_agreement":null},{"id":"W1999016386","doi":"10.1038/modpathol.2013.97","title":"A survey of immunohistochemical biomarkers for basal-like breast cancer against a gene expression profile gold standard","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; National Institutes of Health; Michael Smith Health Research BC; National Cancer Institute; Sanofi","keywords":"Breast cancer; Tissue microarray; Biomarker; Basal (medicine); Immunohistochemistry; Oncology; Gene expression profiling; Triple-negative breast cancer; Cancer; Internal medicine; Pathology; Biology; Cancer research; Medicine; Gene expression; Gene; Genetics","score_opus":0.012801661033090012,"score_gpt":0.26435852720850783,"score_spread":0.25155686617541784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999016386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9745127,0.015870938,0.0056601283,0.00037045177,0.00006131584,0.000058478363,0.0007216415,0.000061605104,0.0026827147],"genre_scores_gemma":[0.99083745,0.0037763165,0.0032069758,0.0001876363,0.00005016389,0.000044629367,0.0013550498,0.000017941871,0.0005238255],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989247,0.00023768353,0.00013163514,0.0002424586,0.00036388217,0.0000996386],"domain_scores_gemma":[0.99815625,0.000611196,0.000342487,0.0001545081,0.0006077907,0.00012777353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026959814,0.00037190533,0.0005034284,0.002560765,0.00033501908,0.00072075595,0.0003170741,0.00035593167,0.0008088451],"category_scores_gemma":[0.002735763,0.0000992142,0.0003050091,0.001739409,0.00039142766,0.00060151884,0.0004167548,0.0002539367,0.0002946182],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017109681,0.00026353542,0.73038226,0.00056341896,0.0004114891,0.00035145847,0.00027624174,0.00046076797,0.11725645,0.0006624591,0.0011471643,0.14651382],"study_design_scores_gemma":[0.00004077129,0.0023684565,0.92765623,0.0001763043,0.0007516225,0.0036300658,0.0008892301,0.002272944,0.04739156,0.0009818303,0.01381594,0.000025024783],"about_ca_topic_score_codex":0.0003192666,"about_ca_topic_score_gemma":0.0003908888,"teacher_disagreement_score":0.0026959814,"about_ca_system_score_codex":0.00032227792,"about_ca_system_score_gemma":0.0003147745,"threshold_uncertainty_score":0.014257848},"labels":[],"label_agreement":null},{"id":"W1999069678","doi":"10.1038/modpathol.3800265","title":"von Willebrand factor expression in osteosarcoma metastasis","year":2004,"lang":"de","type":"article","venue":"Modern Pathology","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Osteosarcoma; Von Willebrand factor; Metastasis; Pathology; Tumor progression; Immunohistochemistry; Primary tumor; Cancer research; Circulating tumor cell; Biology; Medicine; Cancer; Platelet; Immunology; Internal medicine","score_opus":0.019226536143540175,"score_gpt":0.2689323145554042,"score_spread":0.249705778411864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999069678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99368745,0.00402958,0.00036765327,0.00011413451,0.00001568252,0.0000064634346,0.000056585286,0.000012253753,0.001710274],"genre_scores_gemma":[0.9972958,0.0008863501,0.00018348951,0.000013960151,0.00001634431,0.000004791449,0.0000685798,0.0000016933066,0.0015290859],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99989855,0.000018614734,0.000009093509,0.00001227656,0.0000344837,0.000027028258],"domain_scores_gemma":[0.99990785,0.000030686082,0.000016997123,0.000005540358,0.000017853616,0.000020955924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021405586,0.00008295313,0.0001791265,0.0008320933,0.00030004655,0.00037229684,0.00010868062,0.00033346342,0.001809744],"category_scores_gemma":[0.00040383075,0.00015916258,0.00009582194,0.0004700392,0.00020308782,0.00026234036,0.0001507645,0.00023648865,0.00017148796],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023060485,0.000143327,0.0372101,0.00017915055,0.000059205388,0.0024982325,0.00045569954,0.00033393863,0.9320377,0.0029854013,0.00082735973,0.020963702],"study_design_scores_gemma":[0.00026299275,0.0018133922,0.46895,0.000052038133,0.00039607805,0.01697192,0.0017333932,0.004130965,0.47572613,0.0026754718,0.027254822,0.000032895307],"about_ca_topic_score_codex":0.001664612,"about_ca_topic_score_gemma":0.0017550839,"teacher_disagreement_score":0.001809744,"about_ca_system_score_codex":0.00034398798,"about_ca_system_score_gemma":0.0002487748,"threshold_uncertainty_score":0.0060542226},"labels":[],"label_agreement":null},{"id":"W1999855018","doi":"10.1038/modpathol.3800648","title":"Overexpression of the receptor for hyaluronic acid mediated motility is an independent adverse prognostic factor in colorectal cancer","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Novartis Foundation","keywords":"Colorectal cancer; MLH1; Medicine; Tissue microarray; Surgical oncology; Microsatellite instability; Immunohistochemistry; Internal medicine; Cancer; Tumor progression; Pathology; Oncology; DNA mismatch repair; Biology; Gene","score_opus":0.016322002476601635,"score_gpt":0.28164112099587296,"score_spread":0.2653191185192713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999855018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984598,0.00069196965,0.00019592844,0.0000858709,0.000012906464,0.0000023603502,0.00008913447,0.000014310398,0.0004477684],"genre_scores_gemma":[0.9990181,0.00032931406,0.00013056566,0.000013776516,0.000025058425,0.000002878092,0.00016582591,0.0000028951101,0.00031171873],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998969,0.000025248364,0.000009377277,0.000015911235,0.000028131497,0.000024356812],"domain_scores_gemma":[0.99925464,0.00016877068,0.00027038495,0.00005755033,0.000073656374,0.0001749947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019330587,0.00018129274,0.00019691259,0.0006951745,0.00025103573,0.00042942166,0.00016958141,0.00030260303,0.0011294048],"category_scores_gemma":[0.000791751,0.00019149575,0.00012424088,0.00069015496,0.0003320682,0.0001998703,0.00022234893,0.00041804143,0.00026375888],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017018464,0.00010510495,0.87181795,0.000060820446,0.000077563265,0.0010536097,0.00007324113,0.00017549437,0.114306204,0.00020893328,0.00045138667,0.009967831],"study_design_scores_gemma":[0.000013791392,0.00016244009,0.98915255,0.000002984117,0.000058905283,0.0016535891,0.000075498734,0.0005062055,0.007563084,0.00011269992,0.0006924464,0.0000059164963],"about_ca_topic_score_codex":0.00077520224,"about_ca_topic_score_gemma":0.0007180637,"teacher_disagreement_score":0.0011294048,"about_ca_system_score_codex":0.00022339378,"about_ca_system_score_gemma":0.00023575831,"threshold_uncertainty_score":0.0037782788},"labels":[],"label_agreement":null},{"id":"W2000409373","doi":"10.1038/modpathol.3800936","title":"TdT expression in Merkel cell carcinoma: potential diagnostic pitfall with blastic hematological malignancies and expanded immunohistochemical analysis","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":133,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Hamilton Health Sciences","funders":"","keywords":"Merkel cell carcinoma; Pathology; CD117; Merkel cell polyomavirus; Merkel cell; CD99; Terminal deoxynucleotidyl transferase; Immunohistochemistry; Chromogranin A; Carcinoma; Hematopathology; Synaptophysin; CD34; Medicine; Biology; Stem cell; Cytogenetics","score_opus":0.006296784391758028,"score_gpt":0.2315550317892676,"score_spread":0.22525824739750958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000409373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98711014,0.0020279936,0.0037539683,0.00022524432,0.000030324838,0.000031791922,0.00006746917,0.000115423994,0.0066377213],"genre_scores_gemma":[0.9963792,0.00029650083,0.002842506,0.000038145656,0.00002917408,0.0000126106925,0.000045076977,0.000011005779,0.00034581253],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99960095,0.00006547245,0.000105158935,0.00005664401,0.00007217095,0.000099586694],"domain_scores_gemma":[0.9990804,0.00048220003,0.00008671803,0.00014773407,0.00012071659,0.00008221047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011715853,0.0003195754,0.00030612428,0.0015797331,0.0004397968,0.00068861234,0.00048685202,0.000758357,0.0032074586],"category_scores_gemma":[0.0016406165,0.00024872975,0.00024177159,0.0006177023,0.00075839396,0.0012701154,0.0006272159,0.00048799848,0.00044083715],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015099567,0.00014186116,0.2095947,0.0004162793,0.00007207798,0.086691625,0.0006225269,0.00079663045,0.6541756,0.0024345596,0.00061560416,0.04292869],"study_design_scores_gemma":[0.00012248613,0.00059330015,0.22456893,0.00013255572,0.00036894006,0.41122523,0.0017937943,0.018520903,0.32201725,0.004882912,0.015717426,0.000056335],"about_ca_topic_score_codex":0.00047825827,"about_ca_topic_score_gemma":0.0006674127,"teacher_disagreement_score":0.0032074586,"about_ca_system_score_codex":0.00031028464,"about_ca_system_score_gemma":0.00020578166,"threshold_uncertainty_score":0.010729969},"labels":[],"label_agreement":null},{"id":"W2000477149","doi":"10.1038/modpathol.3800273","title":"Invasive lobular carcinoma: to grade or not to grade","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Invasive lobular carcinoma; Lobular carcinoma; Grading (engineering); Medicine; Pathology; Estrogen receptor; Breast cancer; Carcinoma; Progesterone receptor; Nottingham Prognostic Index; Oncology; Cancer; Internal medicine; Ductal carcinoma; Invasive ductal carcinoma; Biology","score_opus":0.02545304145106005,"score_gpt":0.277868220207788,"score_spread":0.252415178756728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000477149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97578293,0.00738205,0.001553621,0.0012952733,0.0002735064,0.000046979716,0.00066055276,0.000026937716,0.012978099],"genre_scores_gemma":[0.997421,0.0009414436,0.00041763263,0.000117760945,0.00010191107,0.0000068510453,0.00025730042,0.000007774098,0.0007283354],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992562,0.00037705954,0.00009465351,0.00008492942,0.00012105351,0.00006609335],"domain_scores_gemma":[0.99714524,0.0011924861,0.0006308741,0.00032648607,0.00045127491,0.00025377318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021669639,0.00025573562,0.00039392072,0.0016495977,0.00030947398,0.00094196596,0.00049903843,0.0003821746,0.00194266],"category_scores_gemma":[0.0076038144,0.00013113604,0.00033686592,0.0014917005,0.0007144848,0.0012490525,0.00047417425,0.00048620143,0.0003963677],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015539228,0.000072448456,0.9552862,0.00018371592,0.00019327144,0.00020127316,0.00051387615,0.0001912551,0.0022047216,0.0012871174,0.0011959777,0.037116207],"study_design_scores_gemma":[0.00008845528,0.0013245858,0.9768902,0.00016735753,0.00036932758,0.0020569002,0.0019511991,0.0010494093,0.0019361156,0.0051055937,0.009029519,0.000031281637],"about_ca_topic_score_codex":0.0020039417,"about_ca_topic_score_gemma":0.005664094,"teacher_disagreement_score":0.0021669639,"about_ca_system_score_codex":0.00046205404,"about_ca_system_score_gemma":0.00040471504,"threshold_uncertainty_score":0.011460125},"labels":[],"label_agreement":null},{"id":"W2001727131","doi":"10.1038/modpathol.3880211","title":"Anaplastic Large Cell Lymphomas Presented as Bone Lesions: A Clinicopathologic Study of Six Cases and Review of the Literature","year":2000,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Anaplastic large-cell lymphoma; CD30; Pathology; Lymphoma; Bone pain; Large cell; Internal medicine","score_opus":0.04387488692084849,"score_gpt":0.3549298185859914,"score_spread":0.31105493166514286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001727131","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29623756,0.68613213,0.0036253708,0.0007815703,0.00032952556,0.00028356077,0.00044154096,0.00017208622,0.011996682],"genre_scores_gemma":[0.5653571,0.4254643,0.00400759,0.0007908598,0.00058303337,0.0000876139,0.0006736783,0.00002936543,0.0030064308],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9996549,0.00003288871,0.00012454804,0.00006481773,0.00006770185,0.000055172593],"domain_scores_gemma":[0.9994155,0.00020254737,0.00016572129,0.00004173627,0.00008468753,0.000089748966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003193832,0.0012541385,0.0011264725,0.0041828337,0.0007502489,0.00090313173,0.0010341435,0.0010336122,0.0019829774],"category_scores_gemma":[0.000987903,0.00047684895,0.00051434344,0.0027659277,0.00078642135,0.0012629018,0.0007771275,0.0005066241,0.0012471034],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028308234,0.00029061633,0.07143293,0.0047567347,0.00025319774,0.5839193,0.002213672,0.00026609018,0.014221961,0.00027276867,0.0042198864,0.3178697],"study_design_scores_gemma":[0.000019133095,0.00013898009,0.03961341,0.0006571892,0.00043083163,0.92625844,0.0011556866,0.00009597864,0.0018466242,0.00026065056,0.029473463,0.000049605136],"about_ca_topic_score_codex":0.0008273031,"about_ca_topic_score_gemma":0.0016724325,"teacher_disagreement_score":0.0041828337,"about_ca_system_score_codex":0.00037559468,"about_ca_system_score_gemma":0.0005887906,"threshold_uncertainty_score":0.0066337585},"labels":[],"label_agreement":null},{"id":"W2001962377","doi":"10.1038/modpathol.2008.108","title":"Immunophenotyping of serous carcinoma of the female genital tract","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Cytokeratin; Serous fluid; Mesothelioma; Pathology; Endometrium; Serous carcinoma; Carcinoma; Ovary; Immunohistochemistry; Medicine; Biology; Internal medicine; Ovarian cancer; Cancer","score_opus":0.030849163167968385,"score_gpt":0.25025144537175553,"score_spread":0.21940228220378716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001962377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99273527,0.0012207933,0.0011108276,0.00011802959,0.000014325293,0.000017897242,0.00007691143,0.000022443142,0.0046835113],"genre_scores_gemma":[0.99792165,0.0005886002,0.0007612176,0.00004527991,0.000016653292,0.0000071075247,0.00007009432,0.0000054733623,0.0005840191],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998324,0.00004905819,0.000016455944,0.000020041392,0.000037398182,0.000044659133],"domain_scores_gemma":[0.9998068,0.000069227375,0.000032927703,0.00001974644,0.0000394393,0.00003190081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029840536,0.00015002955,0.00012494969,0.0010380326,0.00026847873,0.00033798572,0.00014947666,0.00024004912,0.0013821438],"category_scores_gemma":[0.000539876,0.00009773469,0.000107997235,0.00038889662,0.00023357572,0.00021569095,0.0002032736,0.00014910183,0.00024659137],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009982879,0.00010391507,0.5476938,0.00016941252,0.00004430374,0.010414734,0.00044528308,0.00037887538,0.38767338,0.0010147337,0.00087818346,0.050185107],"study_design_scores_gemma":[0.000033589247,0.0005694252,0.8316624,0.00006708129,0.00008368153,0.051344376,0.0012994184,0.0028076274,0.096737824,0.0007116241,0.014669153,0.000013782316],"about_ca_topic_score_codex":0.00037785634,"about_ca_topic_score_gemma":0.000433099,"teacher_disagreement_score":0.0013821438,"about_ca_system_score_codex":0.00015450681,"about_ca_system_score_gemma":0.00012725254,"threshold_uncertainty_score":0.004623711},"labels":[],"label_agreement":null},{"id":"W2003295161","doi":"10.1038/modpathol.2010.156","title":"International Society of Urological Pathology (ISUP) Consensus Conference on Handling and Staging of Radical Prostatectomy Specimens. Working group 2: T2 substaging and prostate cancer volume","year":2010,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":250,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Toronto; University Health Network","funders":"","keywords":"Prostatectomy; Prostate cancer; Medicine; Prostate; Surgical pathology; Cancer; Consensus conference; Oncology; Pathology; Clinical significance; Gynecology; Internal medicine","score_opus":0.06155781132430163,"score_gpt":0.33182707421892116,"score_spread":0.2702692628946195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003295161","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032053684,0.9887059,0.0008511962,0.0042300555,0.0018884595,0.00011172646,0.00044068796,0.000033072425,0.003418331],"genre_scores_gemma":[0.0015417098,0.9916909,0.002479798,0.0012702553,0.0004785879,0.00010496099,0.0010046505,0.00000998904,0.0014192645],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985927,0.00031532985,0.00029143866,0.000099842866,0.00061399373,0.00008670239],"domain_scores_gemma":[0.9960121,0.0010029324,0.0005431932,0.00009636165,0.002145895,0.00019958963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0065029045,0.0010733753,0.0023982797,0.0062649758,0.00054907816,0.0012468921,0.003323118,0.0015218201,0.0033246109],"category_scores_gemma":[0.0044334917,0.00067435054,0.0012656733,0.005766356,0.0009265477,0.0015220308,0.0013868423,0.0023573595,0.0022849524],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009908816,0.00005115694,0.0008336448,0.018427612,0.00015159888,0.00018044031,0.00008491285,0.00023297328,0.00075928954,0.001239379,0.18161944,0.7963205],"study_design_scores_gemma":[0.000051914816,0.00007575788,0.0057886257,0.022250937,0.00048572532,0.0014330936,0.00018432978,0.00010762767,0.0007385578,0.001481821,0.96736556,0.000036042264],"about_ca_topic_score_codex":0.009676374,"about_ca_topic_score_gemma":0.01784736,"teacher_disagreement_score":0.009676374,"about_ca_system_score_codex":0.0018825273,"about_ca_system_score_gemma":0.009627312,"threshold_uncertainty_score":0.034391105},"labels":[],"label_agreement":null},{"id":"W2003990388","doi":"10.1038/modpathol.3880252","title":"Reversible Transdifferentiation: Interconversion of Somatotrophs and Lactotrophs in Pituitary Hyperplasia","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Universidade de Santiago de Compostela","keywords":"Prolactin cell; Somatotropic cell; Thyrotropic cell; Pituitary adenoma; Endocrinology; Internal medicine; Hyperplasia; Prolactin; Acromegaly; Pathology; Prolactinoma; Corticotropic cell; Pituitary gland; Adenoma; Medicine; Biology; Hormone; Growth hormone","score_opus":0.012912541137827895,"score_gpt":0.2322709695729385,"score_spread":0.2193584284351106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003990388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9244501,0.02831339,0.026375601,0.0010868831,0.00045692638,0.000074988995,0.00029431368,0.0006296729,0.018318191],"genre_scores_gemma":[0.9803516,0.006615502,0.005915443,0.00021142639,0.00019441026,0.000051919204,0.00023067203,0.00009395796,0.00633503],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99976987,0.000039249528,0.000019996649,0.000056668443,0.000072662406,0.00004148669],"domain_scores_gemma":[0.9997955,0.000061321414,0.000029676921,0.000060903425,0.00002149179,0.000031140855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004738979,0.00032941764,0.00025946408,0.00069405406,0.0003639237,0.0004901563,0.0009143793,0.00044749049,0.0020309803],"category_scores_gemma":[0.00048183248,0.00025938568,0.0002856301,0.00036797312,0.0013025803,0.001179701,0.0007137416,0.001120435,0.00043973248],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005406293,0.000053200176,0.0020111476,0.00026703335,0.000017647762,0.0017928933,0.00027421548,0.00018217803,0.94501203,0.017053477,0.00026809226,0.0325275],"study_design_scores_gemma":[0.000093904,0.0007258702,0.0126680005,0.000035747158,0.000057912188,0.013594131,0.00043839624,0.0009478145,0.9301433,0.012876803,0.028378332,0.00003982749],"about_ca_topic_score_codex":0.0002844477,"about_ca_topic_score_gemma":0.0003339887,"teacher_disagreement_score":0.0020309803,"about_ca_system_score_codex":0.00036185386,"about_ca_system_score_gemma":0.00033941714,"threshold_uncertainty_score":0.006794274},"labels":[],"label_agreement":null},{"id":"W2004524056","doi":"10.1038/modpathol.2008.78","title":"Expression of c-kit in fibroepithelial lesions of the breast is a mast cell phenomenon","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"Institute for Clinical Evaluative Sciences","keywords":"CD117; Pathology; Stromal cell; Stroma; Immunohistochemistry; Staining; Tryptase; Phyllodes tumor; Receptor tyrosine kinase; Mast cell; Medicine; Biology; Receptor; CD34; Immunology; Internal medicine","score_opus":0.019142495058331974,"score_gpt":0.22460701107012274,"score_spread":0.20546451601179078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004524056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889621,0.004672376,0.00091933506,0.00015706084,0.000023802862,0.000014703673,0.000049572536,0.000037958158,0.0051630135],"genre_scores_gemma":[0.9979304,0.0008970432,0.0004364283,0.000031901818,0.000061496816,0.000004533179,0.000039619885,0.0000038567805,0.0005947474],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998307,0.000027608772,0.000023987304,0.000033988043,0.000045302157,0.00003843622],"domain_scores_gemma":[0.99961424,0.0001331606,0.00010915368,0.000051028903,0.000051134277,0.000041259333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003207438,0.0001982634,0.00018713658,0.0012136342,0.00029823554,0.00048063637,0.0002479921,0.00044062836,0.0013179898],"category_scores_gemma":[0.00073995534,0.0001553065,0.00011718544,0.00083249103,0.0006890988,0.00059761666,0.00034148252,0.00030621912,0.00026909326],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014122833,0.00010369735,0.08728034,0.00046041695,0.000048888796,0.031574387,0.00080217695,0.00012221553,0.8416214,0.0027610373,0.00062199903,0.033191092],"study_design_scores_gemma":[0.00008691849,0.0008558249,0.49472842,0.00007996241,0.00021347626,0.26000294,0.0012527949,0.0012381928,0.22538885,0.0021349937,0.0139612295,0.000056421402],"about_ca_topic_score_codex":0.00027917288,"about_ca_topic_score_gemma":0.000266161,"teacher_disagreement_score":0.0013179898,"about_ca_system_score_codex":0.00019469523,"about_ca_system_score_gemma":0.000108170796,"threshold_uncertainty_score":0.004409075},"labels":[],"label_agreement":null},{"id":"W2006648625","doi":"10.1038/modpathol.2012.94","title":"Tumor budding in colorectal carcinoma: time to take notice","year":2012,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":296,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Tumor budding; Colorectal cancer; Medicine; Notice; Pathology; Budding; Oncology; Surgical pathology; Cancer research; Biology; Cancer; Internal medicine; Political science","score_opus":0.053772081141884844,"score_gpt":0.32447733300034076,"score_spread":0.2707052518584559,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006648625","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000050498846,0.9983948,0.00006570287,0.00075616303,0.00041655812,0.0000013463713,0.000008057185,0.000004957331,0.0003019405],"genre_scores_gemma":[0.00055019115,0.997652,0.00016504136,0.00060482806,0.0006751077,0.0000017967975,0.00001948458,0.0000012487927,0.00033031654],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99969506,0.00005260561,0.00006026376,0.00004865539,0.00011314272,0.000030351892],"domain_scores_gemma":[0.99893326,0.0005037496,0.00013714818,0.000029117278,0.00029753003,0.000099136916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010092378,0.0008022246,0.0019488093,0.0021089711,0.00031101174,0.0016282402,0.0009890896,0.0017190548,0.0023092225],"category_scores_gemma":[0.0014895783,0.00034790023,0.0005490143,0.0025441537,0.0008347733,0.002731884,0.00077628816,0.0026705412,0.0013206663],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009327948,0.000042473926,0.00045788405,0.015341247,0.00008860308,0.00046738033,0.000059035487,0.00033311153,0.00091968867,0.002061232,0.07555981,0.9045763],"study_design_scores_gemma":[0.000026245718,0.0000721609,0.001327718,0.0057055512,0.00018927165,0.0025503773,0.0001622195,0.0001265752,0.00022144901,0.002010092,0.98757744,0.00003090691],"about_ca_topic_score_codex":0.0014993551,"about_ca_topic_score_gemma":0.003743891,"teacher_disagreement_score":0.0023092225,"about_ca_system_score_codex":0.0008712113,"about_ca_system_score_gemma":0.0016541957,"threshold_uncertainty_score":0.007725179},"labels":[],"label_agreement":null},{"id":"W2007357409","doi":"10.1038/modpathol.3880475","title":"Recent Advances in the Diagnosis of Churg-Strauss Syndrome","year":2001,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Vasculitis and related conditions","field":"Medicine","cited_by":167,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Eosinophilia; Medicine; Necrotizing Vasculitis; Vasculitis; Pathology; Eosinophilic; Asthma; Angiolymphoid hyperplasia with eosinophilia; Infiltration (HVAC); Eosinophil; Churg-strauss syndrome; Disease; Immunology","score_opus":0.049528067947355814,"score_gpt":0.34268379331185733,"score_spread":0.2931557253645015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007357409","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014007231,0.9983234,0.0003178558,0.0003527387,0.00028561323,0.0000033528809,0.0000070749024,0.000007493081,0.0005624495],"genre_scores_gemma":[0.0011565506,0.9965063,0.00054906216,0.00035646814,0.0010360744,0.0000042352335,0.000023370905,0.0000016811189,0.00036622284],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99948704,0.00010612688,0.00010252871,0.0000946658,0.00017135126,0.00003815925],"domain_scores_gemma":[0.99780315,0.001305188,0.00022814031,0.000056213572,0.00048690077,0.000120474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011298739,0.0012012899,0.0024146284,0.003994345,0.00035882863,0.0011873455,0.0012345643,0.0015135463,0.0027143504],"category_scores_gemma":[0.0023408595,0.00037243968,0.00064120645,0.0030845203,0.00093950285,0.002121512,0.00083179004,0.0019004317,0.0016938386],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010785795,0.00006260034,0.00075913756,0.0098028565,0.00008779249,0.0013079791,0.000063242944,0.0003236731,0.0011766542,0.001172944,0.017505642,0.9676297],"study_design_scores_gemma":[0.00006577638,0.0001816054,0.0051620402,0.0068719666,0.00054439524,0.022068668,0.0002137332,0.0004049829,0.0009529124,0.003642346,0.9598177,0.00007386697],"about_ca_topic_score_codex":0.0016765753,"about_ca_topic_score_gemma":0.0028250364,"teacher_disagreement_score":0.003994345,"about_ca_system_score_codex":0.00077797926,"about_ca_system_score_gemma":0.0013651625,"threshold_uncertainty_score":0.00908035},"labels":[],"label_agreement":null},{"id":"W2007359749","doi":"10.1038/modpathol.2010.159","title":"International Society of Urological Pathology (ISUP) Consensus Conference on Handling and Staging of Radical Prostatectomy Specimens: rationale and organization","year":2010,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Prostatectomy; Medicine; Prostate cancer; Consensus conference; Lymphovascular invasion; Surgical pathology; Pathology; Anatomical pathology; Standardization; General surgery; Medical physics; Cancer; Internal medicine; Metastasis; Political science","score_opus":0.05844576117237765,"score_gpt":0.32369479096881393,"score_spread":0.2652490297964363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007359749","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020681239,0.9929396,0.0007340024,0.0030654024,0.0009840442,0.00006803805,0.000110793844,0.00001783447,0.0018734622],"genre_scores_gemma":[0.0012470199,0.9929523,0.0030240905,0.0014835211,0.0003738602,0.00005620649,0.0002488461,0.000004238488,0.0006099126],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99859744,0.00033443474,0.00031422812,0.0001441418,0.00052782486,0.00008185872],"domain_scores_gemma":[0.99645555,0.0009713551,0.0005137163,0.00008727419,0.0018339203,0.00013818589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0053438996,0.0010294023,0.0022488805,0.0057181315,0.0006406811,0.0013831931,0.0022631243,0.0014354858,0.0016714226],"category_scores_gemma":[0.0041744546,0.00051670405,0.000962788,0.005219539,0.0010582181,0.001761396,0.0012633451,0.002758782,0.0010069059],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084308565,0.00007283179,0.0010188445,0.026006637,0.00013167951,0.00024711675,0.00010702773,0.00025999296,0.0015128499,0.0027804268,0.07428319,0.8934951],"study_design_scores_gemma":[0.00003067575,0.000073343,0.0037369132,0.019023256,0.00050868466,0.0012463882,0.00017603653,0.0001236062,0.00078723725,0.0013715306,0.972887,0.000035445664],"about_ca_topic_score_codex":0.0060278624,"about_ca_topic_score_gemma":0.0138094565,"teacher_disagreement_score":0.0060278624,"about_ca_system_score_codex":0.002116222,"about_ca_system_score_gemma":0.0104410555,"threshold_uncertainty_score":0.028261602},"labels":[],"label_agreement":null},{"id":"W2007389278","doi":"10.1097/01.mp.0000032535.62750.d1","title":"Loss of Heterozygosity Associated with Uniparental Disomy in Breast Carcinoma","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Canadian Institutes of Health Research; Calgary Laboratory Services","keywords":"Loss of heterozygosity; Biology; Tumor suppressor gene; Uniparental disomy; Mitotic crossover; Genetics; Cancer research; Molecular biology; Chromosome; Gene; Carcinogenesis; Karyotype; Allele","score_opus":0.009285291572837267,"score_gpt":0.18776234631049915,"score_spread":0.17847705473766187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007389278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99569666,0.0022064783,0.0010102163,0.000033434706,0.000008397998,0.0000145836175,0.000039593302,0.000014548001,0.0009760698],"genre_scores_gemma":[0.9992136,0.00037844427,0.0002131214,0.000012477505,0.000009204127,0.0000039798815,0.00004018158,0.0000022362528,0.0001267456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994259,0.0001120643,0.00007086665,0.000104222876,0.00018500471,0.000101935926],"domain_scores_gemma":[0.9989717,0.00027148385,0.00046608702,0.00010107721,0.000089042915,0.00010053625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056718,0.00023670882,0.00030658516,0.0019984285,0.0003091493,0.00028512947,0.00030730327,0.0003814926,0.0010942532],"category_scores_gemma":[0.0016860843,0.00019356167,0.00020629163,0.0006564132,0.0005813193,0.00020896157,0.00038357836,0.00026068132,0.0002793542],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010844033,0.0001335845,0.6426508,0.00026477594,0.0001770087,0.036082555,0.00071443367,0.0003094641,0.28920192,0.0006083818,0.00032187862,0.02845075],"study_design_scores_gemma":[0.00002897539,0.00047747316,0.79942775,0.000050206323,0.00021702197,0.16322958,0.00035806734,0.0007613565,0.03296386,0.0007203688,0.0017375464,0.000027791688],"about_ca_topic_score_codex":0.00046948734,"about_ca_topic_score_gemma":0.00061711215,"teacher_disagreement_score":0.0019984285,"about_ca_system_score_codex":0.00021124631,"about_ca_system_score_gemma":0.0001395163,"threshold_uncertainty_score":0.0036606193},"labels":[],"label_agreement":null},{"id":"W2007418983","doi":"10.1038/modpathol.2009.70","title":"Uncommon and recently described renal carcinomas","year":2009,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":213,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Credit Valley Hospital","funders":"","keywords":"Pathology; Medicine; Clear cell carcinoma; Carcinoma; Chromophobe cell; Renal cell carcinoma; Papillary renal cell carcinomas; Clear cell; Adenocarcinoma; Cancer; Internal medicine","score_opus":0.08556332779309314,"score_gpt":0.3245847600628006,"score_spread":0.23902143226970748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007418983","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011057392,0.9949419,0.00053018687,0.00028331304,0.00030589654,0.000009012552,0.00004572227,0.000020625748,0.0027575218],"genre_scores_gemma":[0.0066335923,0.9900171,0.00066416344,0.0003979586,0.0006226847,0.0000067192345,0.00009986957,0.0000047943513,0.0015531062],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997681,0.000031728152,0.000051833747,0.00005081074,0.00007170631,0.000025855663],"domain_scores_gemma":[0.99948114,0.00021256559,0.00013945736,0.000029464407,0.00009933594,0.000038081114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003337675,0.00074488064,0.0011760393,0.0032422598,0.00030924098,0.00084946014,0.0007674141,0.0007678831,0.002886645],"category_scores_gemma":[0.0010514276,0.00027378014,0.0004274615,0.003028166,0.00064584834,0.0017651771,0.00066800235,0.0009698221,0.0011819645],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000527837,0.000037228183,0.0015860267,0.0113734035,0.0000977778,0.006416582,0.00011696022,0.00045918245,0.002341846,0.0013747159,0.023898598,0.9522449],"study_design_scores_gemma":[0.000015832602,0.0000658868,0.005184492,0.0036662512,0.00040687082,0.07474919,0.00017026716,0.00023751926,0.001607213,0.0014612582,0.91238856,0.0000467416],"about_ca_topic_score_codex":0.00087050383,"about_ca_topic_score_gemma":0.0025803912,"teacher_disagreement_score":0.0032422598,"about_ca_system_score_codex":0.0004368611,"about_ca_system_score_gemma":0.0011357702,"threshold_uncertainty_score":0.009656787},"labels":[],"label_agreement":null},{"id":"W2008210425","doi":"10.1038/modpathol.3880046","title":"Cytologic and Histologic Diagnosis and Significance of Controversial Squamous Lesions of the Uterine Cervix","year":2000,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Squamous metaplasia; Pathology; Medicine; Uterine cervix; Metaplasia; Cervix; Cytology; Cytopathology; Epithelium; Carcinoma; Cancer; Internal medicine","score_opus":0.08739243714127531,"score_gpt":0.3767242723660092,"score_spread":0.2893318352247339,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008210425","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041052667,0.99870336,0.000101315905,0.00010652859,0.000058396236,0.000004241807,0.000015403231,0.0000027564192,0.00059744244],"genre_scores_gemma":[0.0032045387,0.99589705,0.00025666386,0.00015748927,0.0001233647,0.000003899581,0.0000385539,7.853438e-7,0.0003177141],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996675,0.00007097064,0.000060749106,0.00006596757,0.000117608986,0.000017143524],"domain_scores_gemma":[0.999218,0.00048242696,0.00010868627,0.000018416298,0.00014569443,0.000026789347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007207621,0.0005749377,0.0013115946,0.003460451,0.00023753423,0.00081931544,0.00087240373,0.0006727579,0.0014466846],"category_scores_gemma":[0.0017999241,0.000252396,0.0003830927,0.0031568485,0.0007044869,0.001033084,0.00042383387,0.00054761936,0.0005486751],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009388429,0.00002934374,0.0047321334,0.019080563,0.00012543162,0.0017367139,0.00019367923,0.00019476721,0.0021196594,0.0007270743,0.010611011,0.9603558],"study_design_scores_gemma":[0.000042911808,0.00022461204,0.039062936,0.024926653,0.0013647461,0.050658163,0.0014210677,0.00031652336,0.0023370152,0.0028876953,0.8766743,0.00008336644],"about_ca_topic_score_codex":0.0028770387,"about_ca_topic_score_gemma":0.0042063026,"teacher_disagreement_score":0.003460451,"about_ca_system_score_codex":0.0004912576,"about_ca_system_score_gemma":0.0010884394,"threshold_uncertainty_score":0.0057206154},"labels":[],"label_agreement":null},{"id":"W2008397757","doi":"10.1038/modpathol.3800228","title":"Rapid determination of Epstein–Barr virus latent or lytic infection in single human cells using in situ hybridization","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; St. Paul's Hospital; University of British Columbia","funders":"National Cancer Institute","keywords":"Lytic cycle; In situ hybridization; Biology; Virus; Virology; Epstein–Barr virus; Molecular biology; Southern blot; Capsid; Herpesviridae; Antigen; DNA; Gene expression; Viral disease; Gene; Immunology; Genetics","score_opus":0.034171136267876344,"score_gpt":0.28695613725389923,"score_spread":0.2527850009860229,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008397757","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35478842,0.005487615,0.6214353,0.00031972732,0.00039260555,0.00047782986,0.00084616913,0.0021193638,0.014132892],"genre_scores_gemma":[0.67359084,0.0044793193,0.30515307,0.00018577286,0.00022054407,0.00095386175,0.0020940327,0.0004513396,0.012871134],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953246,0.00010663665,0.000050423252,0.00016982667,0.00006610022,0.00007451654],"domain_scores_gemma":[0.9993048,0.00038318313,0.00003261285,0.00017686468,0.000062839776,0.000039688108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010158941,0.0006462843,0.00075581425,0.001029236,0.00063379406,0.0008561335,0.0006632228,0.0007098151,0.003418104],"category_scores_gemma":[0.0005075514,0.0006651953,0.00059604493,0.0005173861,0.00073523895,0.0009742174,0.00054985564,0.0017060149,0.0017316171],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053559495,0.000016584523,0.00013888422,0.00004090321,0.000005980942,0.000037133275,0.000072544266,0.000022997721,0.9971482,0.00034498857,0.000037602178,0.0020805877],"study_design_scores_gemma":[0.000018059376,0.00021768574,0.0021220224,0.00000920467,0.000053143376,0.00040665365,0.00007317124,0.0014630021,0.9915434,0.00052254915,0.0035633417,0.000007727432],"about_ca_topic_score_codex":0.00039697555,"about_ca_topic_score_gemma":0.0007102946,"teacher_disagreement_score":0.003418104,"about_ca_system_score_codex":0.00024991593,"about_ca_system_score_gemma":0.00022983606,"threshold_uncertainty_score":0.011434734},"labels":[],"label_agreement":null},{"id":"W2009087111","doi":"10.1038/modpathol.2014.85","title":"PTEN loss is associated with upgrading of prostate cancer from biopsy to radical prostatectomy","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":150,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Cancer Institute; Prostate Cancer Foundation; Ontario Institute for Cancer Research; National Institutes of Health; Prostate Cancer Canada; Patrick C. Walsh Prostate Cancer Research Fund","keywords":"PTEN; Prostatectomy; Prostate cancer; Medicine; Biopsy; Immunohistochemistry; Prostate; Cancer; Pathology; Urology; Oncology; Internal medicine; Biology; PI3K/AKT/mTOR pathway","score_opus":0.020121912593701975,"score_gpt":0.3041953524961638,"score_spread":0.2840734399024618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009087111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99765295,0.0006749626,0.00022374415,0.00009498421,0.00002676137,0.000004665986,0.00016600426,0.000035581088,0.0011204333],"genre_scores_gemma":[0.9995154,0.00008896064,0.000047667632,0.000012814992,0.00001569886,0.0000012717102,0.00009287958,0.0000031620266,0.00022212909],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995797,0.00007737333,0.000041341722,0.000097826975,0.000107348504,0.00009638759],"domain_scores_gemma":[0.99713993,0.0006143841,0.0013588992,0.0001850278,0.00018235302,0.000519466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041580937,0.0003510378,0.00034480076,0.0013407482,0.00037785975,0.0007021259,0.0006398414,0.00043204872,0.003459476],"category_scores_gemma":[0.004075906,0.00027655892,0.0006256227,0.0011886169,0.00045627894,0.00045460227,0.00053228333,0.0007972057,0.0003392371],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007124924,0.000048246922,0.9897976,0.000023450097,0.00018006866,0.0006233623,0.000056031175,0.000120958335,0.0031379592,0.0000672714,0.00018824909,0.005044333],"study_design_scores_gemma":[0.0000043444034,0.00007667743,0.9977884,0.0000032636813,0.000074222764,0.0011882706,0.00004779826,0.00023921933,0.0002948634,0.0001066348,0.00017067972,0.0000055152486],"about_ca_topic_score_codex":0.0022959285,"about_ca_topic_score_gemma":0.0018437173,"teacher_disagreement_score":0.003459476,"about_ca_system_score_codex":0.00021972743,"about_ca_system_score_gemma":0.00032088815,"threshold_uncertainty_score":0.011573136},"labels":[],"label_agreement":null},{"id":"W2009925410","doi":"10.1038/modpathol.3800677","title":"Immunoglobulin V somatic hypermutation in mantle cell lymphoma: mutated genotype correlates with better clinical outcome","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary; University of Alberta","funders":"","keywords":"Somatic hypermutation; Biology; Mantle cell lymphoma; Genotype; Lymphoma; Molecular biology; Germline mutation; Immunoglobulin heavy chain; Antibody; Mutation; B cell; Genetics; Gene; Immunology","score_opus":0.016598249851778886,"score_gpt":0.27848500497402795,"score_spread":0.26188675512224907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009925410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99928695,0.00015529107,0.000059287424,0.00004208312,0.0000054750417,0.0000013808013,0.00003040189,0.000005153219,0.00041390618],"genre_scores_gemma":[0.9997695,0.000027920893,0.000034541812,0.000012393981,0.00001414309,0.0000013328317,0.000042352116,0.0000020285943,0.00009586086],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99976236,0.00007283885,0.000027690576,0.000038043654,0.000043990647,0.000055195316],"domain_scores_gemma":[0.9984641,0.0004882848,0.00053039216,0.00010477542,0.00012773118,0.00028469885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041318333,0.00024533345,0.00035443736,0.00092166365,0.0002974941,0.00051133736,0.00030504953,0.0006996428,0.002861138],"category_scores_gemma":[0.0020828359,0.00014605589,0.00020332691,0.0006588503,0.00035185748,0.0004209336,0.00021660786,0.00043097656,0.00034461723],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010472137,0.00010804218,0.981171,0.000011088573,0.000061126375,0.0011075728,0.00006418299,0.00011995971,0.011002015,0.000056047,0.00012838625,0.0051231915],"study_design_scores_gemma":[0.000016241389,0.00028194307,0.992251,0.000003934996,0.000048313403,0.0053662243,0.000083141684,0.00039654615,0.0012555348,0.00013555167,0.00015651828,0.000005054413],"about_ca_topic_score_codex":0.00035329425,"about_ca_topic_score_gemma":0.00037031967,"teacher_disagreement_score":0.002861138,"about_ca_system_score_codex":0.00017874107,"about_ca_system_score_gemma":0.0001537168,"threshold_uncertainty_score":0.009571493},"labels":[],"label_agreement":null},{"id":"W2010678553","doi":"10.1038/modpathol.2014.155","title":"NY-ESO-1 (CTAG1B) expression in mesenchymal tumors","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Japan Society for the Promotion of Science; Canadian Cancer Society Research Institute; Fukuoka Foundation for Sound Health; Leids Universitair Medisch Centrum; University of Oxford","keywords":"Mesenchymal stem cell; Pathology; Immunohistochemistry; Tissue microarray; Synovial sarcoma; Medicine; Hematopathology; Mesenchymal chondrosarcoma; Sarcoma; Cancer research; Biology","score_opus":0.00983143027946187,"score_gpt":0.2315009341362818,"score_spread":0.22166950385681994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010678553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99475914,0.001591596,0.0009851825,0.00010880869,0.000019786,0.000009846047,0.00024142727,0.000023955588,0.0022601755],"genre_scores_gemma":[0.9952874,0.000656142,0.000588287,0.00003606775,0.0000090360745,0.000016974776,0.0003699429,0.000007082776,0.0030291113],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999331,0.00000702343,0.0000038924213,0.000014544518,0.000016678587,0.000024692996],"domain_scores_gemma":[0.9999441,0.0000070320993,0.000014834574,0.000003764823,0.00000645503,0.000023934243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009233753,0.00012889867,0.00007205775,0.00036974752,0.00018282155,0.00028503,0.00010993725,0.00023053068,0.001692778],"category_scores_gemma":[0.00009110344,0.00010386997,0.000077937446,0.0001889064,0.00022187772,0.00015646455,0.00016979047,0.0003749548,0.00036786683],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018662191,0.00001662688,0.0020336905,0.000024942507,0.000004335569,0.00020889644,0.00002062855,0.00006864742,0.9952715,0.00033171818,0.00011273643,0.0017195903],"study_design_scores_gemma":[0.000052976047,0.00028255227,0.090968214,0.000021025924,0.000039316117,0.0039717434,0.00036691062,0.0029983153,0.8852787,0.0006022638,0.015407092,0.000010849581],"about_ca_topic_score_codex":0.0005185839,"about_ca_topic_score_gemma":0.00051628385,"teacher_disagreement_score":0.001692778,"about_ca_system_score_codex":0.00025382682,"about_ca_system_score_gemma":0.0001706935,"threshold_uncertainty_score":0.0056628585},"labels":[],"label_agreement":null},{"id":"W2012254521","doi":"10.1038/modpathol.2013.144","title":"ARID1A loss correlates with mismatch repair deficiency and intact p53 expression in high-grade endometrial carcinomas","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":133,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Mount Sinai Hospital; Princess Margaret Cancer Centre; University of British Columbia; University Health Network","funders":"National Cancer Institute","keywords":"ARID1A; Serous fluid; Clear cell; Clear cell carcinoma; Medicine; Immunohistochemistry; Serous carcinoma; Microsatellite instability; Carcinoma; Endometrial cancer; Pathology; DNA mismatch repair; Cancer research; Internal medicine; Cancer; Oncology; Biology; Mutation; Gene; Ovarian cancer","score_opus":0.008354661122166,"score_gpt":0.22177074743622963,"score_spread":0.2134160863140636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012254521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99897206,0.00043962768,0.0002458958,0.000019197185,0.000002873936,0.0000029168061,0.0000726651,0.000008444745,0.00023636453],"genre_scores_gemma":[0.9995535,0.00012651308,0.00010973131,0.0000062462664,0.000004544811,0.0000031950003,0.00006887469,0.0000022216593,0.00012515573],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997564,0.00004874309,0.000049914135,0.000043544107,0.000056552577,0.00004480423],"domain_scores_gemma":[0.99880207,0.00023351604,0.0005263088,0.00011878634,0.000091967086,0.00022745409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003833806,0.0002025925,0.00026561774,0.0013359109,0.00026500004,0.00059584476,0.0003569761,0.00031881037,0.0014590647],"category_scores_gemma":[0.001172998,0.00035219244,0.00019598707,0.0006845995,0.0005102285,0.00031571309,0.0004119818,0.0002870442,0.00034775797],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002718943,0.00008526862,0.69092697,0.00008423013,0.00013739581,0.0030921004,0.00018494797,0.00018409012,0.29639876,0.00021051458,0.00012415672,0.005852697],"study_design_scores_gemma":[0.00002097564,0.00013029492,0.96605444,0.0000058683263,0.00006190966,0.0075405543,0.0002804364,0.0005141078,0.02468397,0.00017465494,0.0005239301,0.000008950843],"about_ca_topic_score_codex":0.00035502767,"about_ca_topic_score_gemma":0.00032701765,"teacher_disagreement_score":0.0014590647,"about_ca_system_score_codex":0.00016004554,"about_ca_system_score_gemma":0.00016569559,"threshold_uncertainty_score":0.0048810244},"labels":[],"label_agreement":null},{"id":"W2012505736","doi":"10.1038/modpathol.2013.103","title":"HER2 in situ hybridization in breast cancer: clinical implications of polysomy 17 and genetic heterogeneity","year":2013,"lang":"en","type":"review","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":282,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute for Health and Care Research","keywords":"Polysomy; Trastuzumab; Breast cancer; Genetic heterogeneity; Fluorescence in situ hybridization; Chromosome 17 (human); Cancer; Biology; Oncology; Pathology; Internal medicine; Chromosome; Medicine; Genetics; Phenotype; Gene","score_opus":0.14856773862352984,"score_gpt":0.48226546491079003,"score_spread":0.3336977262872602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012505736","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001305571,0.9990374,0.000110294015,0.00024277125,0.000096025986,0.000001457826,0.000012631705,0.0000036868985,0.00036530526],"genre_scores_gemma":[0.0010453513,0.99812895,0.00019221407,0.00021797624,0.00019240279,0.00000209333,0.000026495949,0.0000013301905,0.00019316965],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997222,0.00004612233,0.000042779255,0.000065084794,0.00010028866,0.000023458093],"domain_scores_gemma":[0.99929535,0.00042399263,0.00009378794,0.000014020769,0.00013264922,0.000040113806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008543452,0.00067639415,0.0012754763,0.0026670063,0.00013786652,0.0007774675,0.0009147104,0.0008190056,0.001551864],"category_scores_gemma":[0.0012779813,0.00024422817,0.00039778036,0.0025105497,0.00055011536,0.0011949565,0.0006614314,0.0010275327,0.00066625356],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050918825,0.000018089491,0.00076902955,0.00800597,0.000092468275,0.00057984993,0.000041096504,0.00020611154,0.0012491662,0.0014042563,0.016492935,0.97109014],"study_design_scores_gemma":[0.000028598097,0.00008339829,0.0048325243,0.0072365194,0.00057128374,0.010170642,0.00025510116,0.00018931783,0.0009409307,0.0036570774,0.97197986,0.000054727327],"about_ca_topic_score_codex":0.0011861009,"about_ca_topic_score_gemma":0.0024845034,"teacher_disagreement_score":0.0026670063,"about_ca_system_score_codex":0.00057065394,"about_ca_system_score_gemma":0.0010914308,"threshold_uncertainty_score":0.005191505},"labels":[],"label_agreement":null},{"id":"W2012908693","doi":"10.1038/modpathol.2009.49","title":"SIRT1 histone deacetylase expression is associated with microsatellite instability and CpG island methylator phenotype in colorectal cancer","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sirtuins and Resveratrol in Medicine","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; National Institutes of Health; Gary Bennett Family Fund; National Cancer Institute; Entertainment Industry Foundation","keywords":"Cancer research; Biology; MLH1; Microsatellite instability; DNA methylation; Epigenetics; Colorectal cancer; Cancer; Carcinogenesis; Histone deacetylase; Genetics; Histone; DNA mismatch repair; Gene expression; Gene","score_opus":0.011709459046772574,"score_gpt":0.2859350482173591,"score_spread":0.27422558917058654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012908693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999273,0.00029491907,0.00017669552,0.000025397136,0.0000043153127,0.0000021789683,0.00006169541,0.00001348878,0.00014841658],"genre_scores_gemma":[0.99939346,0.00010668397,0.000105829524,0.000008183734,0.0000051393135,0.0000026764158,0.000095012,0.0000036130182,0.00027939887],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99984133,0.000032608026,0.000019775163,0.000034432596,0.000040302803,0.00003152038],"domain_scores_gemma":[0.99897975,0.00012368239,0.0005744521,0.00004798855,0.00007972835,0.00019442577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017984699,0.00019448667,0.00034547495,0.0013105002,0.0002540905,0.0002679622,0.00024338132,0.00034817398,0.0017277268],"category_scores_gemma":[0.00062449294,0.0003147301,0.00025724448,0.00069595006,0.00029689452,0.00015365833,0.00022061224,0.00037684082,0.00023585612],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049927873,0.00011426278,0.27192882,0.00010736758,0.0001818804,0.0017678464,0.00017096987,0.000101333106,0.7158721,0.000110308574,0.00018550217,0.0044668545],"study_design_scores_gemma":[0.00002693054,0.00032782156,0.9743766,0.0000035571154,0.00009583375,0.0029074682,0.00010381436,0.00034561416,0.02140734,0.00006139469,0.00033413363,0.00000947022],"about_ca_topic_score_codex":0.001212056,"about_ca_topic_score_gemma":0.0016597424,"teacher_disagreement_score":0.0017277268,"about_ca_system_score_codex":0.00022619637,"about_ca_system_score_gemma":0.00014374466,"threshold_uncertainty_score":0.0057798624},"labels":[],"label_agreement":null},{"id":"W2013122757","doi":"10.1038/modpathol.3880472","title":"In Vivo Identification of Langerhans and Related Dendritic Cells Infected with HIV-1 Subtype E in Vaginal Mucosa of Asymptomatic Patients","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto","funders":"","keywords":"Immunoperoxidase; Pathology; Immunophenotyping; Lamina propria; Asymptomatic; Medicine; Biology; Immunology; Antigen; Epithelium; Antibody; Monoclonal antibody","score_opus":0.008088371668379663,"score_gpt":0.24598500778724552,"score_spread":0.23789663611886586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013122757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994822,0.00012804325,0.000049882558,0.0000065731388,0.0000035060082,0.000006086724,0.000025984453,0.0000017298609,0.00029605796],"genre_scores_gemma":[0.999524,0.000088406836,0.00007734136,0.000023150998,0.0000074472255,0.000005215921,0.000057991394,0.0000016417649,0.00021471443],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998727,0.000027993312,0.000010051772,0.000032721102,0.000015158195,0.000041391086],"domain_scores_gemma":[0.99978393,0.00006946956,0.000028585448,0.000019464638,0.000024398252,0.00007413469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017966273,0.00020828466,0.00027646427,0.0003924563,0.000383247,0.00048588036,0.00012256794,0.00043144333,0.0012048532],"category_scores_gemma":[0.00060820027,0.00019981903,0.00011651778,0.00018520596,0.00022101754,0.00029720378,0.00017246579,0.000404208,0.00017818616],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006949956,0.00074623496,0.30746746,0.000121801495,0.00004321091,0.0054107467,0.0011667708,0.0001394034,0.6638472,0.00022252821,0.00016648274,0.013718131],"study_design_scores_gemma":[0.00021597696,0.006346055,0.9035181,0.000033416458,0.00013137385,0.020448191,0.0030166938,0.0012090526,0.06323225,0.0002659074,0.0015609937,0.000022041753],"about_ca_topic_score_codex":0.00042153875,"about_ca_topic_score_gemma":0.00028059995,"teacher_disagreement_score":0.0012048532,"about_ca_system_score_codex":0.00010214486,"about_ca_system_score_gemma":0.000115631854,"threshold_uncertainty_score":0.004030645},"labels":[],"label_agreement":null},{"id":"W2013168905","doi":"10.1038/modpathol.2014.143","title":"Clinicopathological analysis of endometrial carcinomas harboring somatic POLE exonuclease domain mutations","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":218,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"","keywords":"PTEN; Endometrial cancer; Nuclear atypia; Pathology; Hematopathology; Adenocarcinoma; Biology; Somatic cell; Serous fluid; Carcinoma; Cancer; Medicine; Cancer research; Internal medicine; Immunohistochemistry; Chromosome; Gene; Genetics; Cytogenetics","score_opus":0.041919747505685306,"score_gpt":0.3179876011557045,"score_spread":0.2760678536500192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013168905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970983,0.0007864947,0.00025186353,0.000038190883,0.000012010295,0.0000100278685,0.0001823955,0.000009240378,0.0016115692],"genre_scores_gemma":[0.99929214,0.00017218037,0.00012349333,0.000015016471,0.000014247549,0.000004984224,0.00013479734,0.0000019134973,0.00024119331],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997757,0.000042236094,0.00003900732,0.00004921797,0.00003329038,0.000060612736],"domain_scores_gemma":[0.9994042,0.00016506137,0.00015707275,0.000053252053,0.00007257414,0.00014789091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005558899,0.000257537,0.00021348638,0.0013537607,0.00050585036,0.00048863504,0.00020024778,0.0004385108,0.0018817979],"category_scores_gemma":[0.0013158595,0.00020794693,0.00029621116,0.0008899506,0.0004492996,0.00036132886,0.00029750544,0.00020867508,0.0003182],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009188537,0.000033593078,0.9663176,0.000043216383,0.00005551471,0.017239857,0.00018321993,0.00013606469,0.008989842,0.0001426041,0.0003065411,0.0056330995],"study_design_scores_gemma":[0.000022660919,0.00020620205,0.93793184,0.000013824916,0.00011495691,0.056731306,0.00059970544,0.00053261954,0.0017526429,0.00019374382,0.0018851099,0.000015350468],"about_ca_topic_score_codex":0.000600989,"about_ca_topic_score_gemma":0.0010496125,"teacher_disagreement_score":0.0018817979,"about_ca_system_score_codex":0.00023674245,"about_ca_system_score_gemma":0.00023439269,"threshold_uncertainty_score":0.006295264},"labels":[],"label_agreement":null},{"id":"W2013261485","doi":"10.1038/modpathol.2012.225","title":"Expression of the RNase III enzyme DROSHA is reduced during progression of human cutaneous melanoma","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Coastal Health; Vancouver Coastal Health Research Institute; University of British Columbia","funders":"CIHR Skin Research Training Centre; Canadian Institutes of Health Research; Canadian Dermatology Foundation","keywords":"Drosha; microRNA; Cancer research; Tissue microarray; Melanoma; Biology; Immunohistochemistry; Pathology; Medicine; RNA; Genetics; RNA interference; Gene","score_opus":0.007731740454127661,"score_gpt":0.2462058130371577,"score_spread":0.23847407258303002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013261485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974941,0.0011859031,0.00038935724,0.000030405661,0.000010137216,0.000005219605,0.00020067873,0.000033202185,0.00065102],"genre_scores_gemma":[0.99810886,0.00029184745,0.00013012218,0.00001564451,0.000005316191,0.000010192685,0.00019024011,0.000008593356,0.001239232],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998977,0.000016026106,0.000006994066,0.000026166825,0.000025062842,0.000028057677],"domain_scores_gemma":[0.99980336,0.000035952566,0.000069080794,0.000020772934,0.000030605832,0.000040187166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112924805,0.00012012181,0.0002659583,0.00043303604,0.00019994425,0.0005073831,0.000107097934,0.00024133541,0.0012725639],"category_scores_gemma":[0.0002714842,0.0002663938,0.00019294272,0.00024856094,0.0002245752,0.00020744628,0.00017595015,0.0003981121,0.00034582062],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093118404,0.000031259246,0.007817902,0.00003362287,0.000017550274,0.00020435832,0.000091510075,0.00006233629,0.9875907,0.00009647985,0.00012276493,0.0030004557],"study_design_scores_gemma":[0.000050764396,0.0007014351,0.59767646,0.000012289741,0.00008692747,0.001659954,0.0005105069,0.0009932852,0.39419708,0.00029062532,0.0037976764,0.000022978047],"about_ca_topic_score_codex":0.00091332826,"about_ca_topic_score_gemma":0.0007091955,"teacher_disagreement_score":0.0012725639,"about_ca_system_score_codex":0.00021255836,"about_ca_system_score_gemma":0.00014643797,"threshold_uncertainty_score":0.0042571425},"labels":[],"label_agreement":null},{"id":"W2014251969","doi":"10.1038/modpathol.2011.191","title":"Overexpression and oncogenic function of aldo-keto reductase family 1B10 (AKR1B10) in pancreatic carcinoma","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Aldose Reductase and Taurine","field":"Biochemistry, Genetics and Molecular Biology","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"National Cancer Institute","keywords":"Carcinogenesis; Pancreatic cancer; KRAS; Cancer research; Biology; Adenocarcinoma; Immunohistochemistry; Pancreas; Apoptosis; Pathology; Cancer; Medicine; Endocrinology; Colorectal cancer; Immunology; Biochemistry","score_opus":0.012657465762705088,"score_gpt":0.23874240701822394,"score_spread":0.22608494125551884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014251969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99667394,0.001445378,0.0006326824,0.00008889566,0.000038806276,0.000007156866,0.00009895335,0.00003032786,0.0009837778],"genre_scores_gemma":[0.99732333,0.00091322523,0.00028302512,0.000017290926,0.00001057461,0.000010173831,0.00015874379,0.000005833086,0.0012778708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998128,0.000039945484,0.000022012957,0.000028740717,0.000042886524,0.00005360642],"domain_scores_gemma":[0.9997459,0.00007216752,0.00004398086,0.000038584745,0.000026514585,0.000072923904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030940614,0.0002999962,0.0002158356,0.000653995,0.00032017555,0.000495785,0.0002327698,0.00035429766,0.0012934302],"category_scores_gemma":[0.00036636737,0.0003238453,0.00021838382,0.00052650267,0.00050013297,0.00037596867,0.00028174891,0.0005066873,0.0005093014],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012312698,0.00019196775,0.010629034,0.000064524866,0.00002354225,0.0016525623,0.000075335774,0.00022688204,0.9816648,0.0003554472,0.00016345458,0.003721151],"study_design_scores_gemma":[0.000128491,0.0014643134,0.104305096,0.000015621627,0.0001542801,0.012211542,0.00073568884,0.0054326206,0.8672508,0.00048504898,0.007789117,0.000027420785],"about_ca_topic_score_codex":0.0011290394,"about_ca_topic_score_gemma":0.0006804464,"teacher_disagreement_score":0.0012934302,"about_ca_system_score_codex":0.0004172084,"about_ca_system_score_gemma":0.00031819972,"threshold_uncertainty_score":0.0043269396},"labels":[],"label_agreement":null},{"id":"W2015827186","doi":"10.1038/modpathol.3880292","title":"Carcinogenesis in the GI Tract: From Morphology to Genetics and Back Again","year":2001,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Microsatellite instability; MLH1; MSH2; DNA mismatch repair; Genome instability; Chromosome instability; Biology; Carcinogenesis; Colorectal cancer; Genetics; Cancer; Cancer research; Microsatellite; Lynch syndrome; Gene; Allele; DNA; DNA damage; Chromosome","score_opus":0.08716406604264278,"score_gpt":0.3453007206514801,"score_spread":0.25813665460883733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015827186","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000072582036,0.9987011,0.00014436094,0.00035355563,0.00027362147,0.0000013913207,0.000004833998,0.0000046515597,0.000443797],"genre_scores_gemma":[0.00039833676,0.9985239,0.00015917925,0.00020418991,0.00036018743,0.0000016149178,0.0000074134764,7.512429e-7,0.0003443527],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997539,0.000051877323,0.000036364054,0.00004931754,0.00008865963,0.000019907702],"domain_scores_gemma":[0.999186,0.00043707847,0.00007950584,0.000027776172,0.0002058768,0.00006383504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084041915,0.0012215158,0.0020261623,0.0027435264,0.0003485983,0.0012879285,0.0010872631,0.0018674281,0.002131284],"category_scores_gemma":[0.0011443349,0.00036704016,0.00051552436,0.0033999006,0.0012079495,0.0024844229,0.0007402358,0.0022351302,0.0014377101],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010516919,0.00006652639,0.000635036,0.014223889,0.00010241746,0.0008082576,0.000098747376,0.0006536879,0.0024973752,0.0036993173,0.037210334,0.9398993],"study_design_scores_gemma":[0.000027417087,0.000096627875,0.00199516,0.003618378,0.00014633434,0.0050788927,0.00018002433,0.00013589636,0.0005370343,0.0036152112,0.98453116,0.00003787215],"about_ca_topic_score_codex":0.0020537495,"about_ca_topic_score_gemma":0.0033779382,"teacher_disagreement_score":0.0027435264,"about_ca_system_score_codex":0.00082965085,"about_ca_system_score_gemma":0.0013950493,"threshold_uncertainty_score":0.007129848},"labels":[],"label_agreement":null},{"id":"W2015918488","doi":"10.1038/modpathol.2011.198","title":"HER2 testing in gastric cancer: a practical approach","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":596,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Trastuzumab; Immunohistochemistry; Cancer; Breast cancer; Medicine; Fluorescence in situ hybridization; Pathology; Capecitabine; Oncology; CISH; In situ hybridization; Stomach cancer; Adenocarcinoma; Metastatic breast cancer; Companion diagnostic; Internal medicine; Biology; Colorectal cancer","score_opus":0.2028628030829037,"score_gpt":0.4404619443020513,"score_spread":0.23759914121914763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015918488","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030055294,0.11107101,0.40957525,0.36693683,0.00834401,0.0008610864,0.00042780547,0.0016441201,0.0710846],"genre_scores_gemma":[0.4208995,0.09478989,0.36614534,0.06267371,0.037951753,0.0009295467,0.0005412481,0.0004092387,0.015659746],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966485,0.0014655155,0.00040095006,0.00036242444,0.0009275916,0.00019505258],"domain_scores_gemma":[0.9924759,0.00409334,0.00024092688,0.00058037665,0.0019078499,0.00070157467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009706363,0.001897181,0.0019349654,0.0045527173,0.0015788955,0.005199819,0.004295495,0.007306153,0.0076318737],"category_scores_gemma":[0.013737579,0.0011030576,0.0013758228,0.0010688346,0.004396329,0.007911969,0.0044207033,0.008933453,0.0028449206],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010311651,0.0011813407,0.042351365,0.0014723398,0.00030361046,0.02891732,0.00092647196,0.0038670334,0.010782315,0.053718634,0.11180326,0.7436451],"study_design_scores_gemma":[0.00089221855,0.0017548255,0.036739137,0.0052330787,0.0010364989,0.12593664,0.008113743,0.031993087,0.009722082,0.51091504,0.26712474,0.00053890835],"about_ca_topic_score_codex":0.0012779471,"about_ca_topic_score_gemma":0.0022343444,"teacher_disagreement_score":0.009706363,"about_ca_system_score_codex":0.00203646,"about_ca_system_score_gemma":0.0024123646,"threshold_uncertainty_score":0.05133277},"labels":[],"label_agreement":null},{"id":"W2016102561","doi":"10.1038/modpathol.2013.199","title":"Frequent expression of KIT in endometrial stromal sarcoma with YWHAE genetic rearrangement","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Royal Alexandra Hospital; University of Alberta","funders":"","keywords":"Pathology; Stromal cell; Immunohistochemistry; Hematopathology; Biology; Sarcoma; Clear cell; Endometrial stromal sarcoma; Fusion gene; Cancer research; Medicine; Cytogenetics; Gene","score_opus":0.020617373547124035,"score_gpt":0.25567176692027704,"score_spread":0.235054393373153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016102561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99605405,0.00073900813,0.00091331115,0.000077884455,0.000017986982,0.000012714859,0.000047405887,0.000021691665,0.0021159828],"genre_scores_gemma":[0.99914026,0.0001660906,0.0003818729,0.000015700964,0.000014377364,0.0000043938853,0.00003670324,0.0000037540196,0.00023676193],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99967146,0.000052554376,0.000045935238,0.000056325058,0.0000809753,0.000092842005],"domain_scores_gemma":[0.99949384,0.000155337,0.00014604532,0.00006327114,0.000064025386,0.000077439996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003221308,0.00028298944,0.00017227694,0.0013374265,0.00030135526,0.00048106816,0.00025590224,0.00061270763,0.002490906],"category_scores_gemma":[0.0016902946,0.000240622,0.00022620003,0.0006926602,0.00047460312,0.00051308714,0.0004861059,0.00023597982,0.0004448678],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088433543,0.00006268446,0.4637327,0.00014813397,0.00010792681,0.28330374,0.0005552458,0.00045853475,0.22478795,0.0010846874,0.0005840114,0.024290107],"study_design_scores_gemma":[0.00004869936,0.0002885932,0.327665,0.00004141027,0.00018767623,0.60414946,0.0013808708,0.0029480949,0.056908898,0.0015886195,0.0047647795,0.000027871993],"about_ca_topic_score_codex":0.0002558959,"about_ca_topic_score_gemma":0.0003687819,"teacher_disagreement_score":0.002490906,"about_ca_system_score_codex":0.00017467036,"about_ca_system_score_gemma":0.00015513999,"threshold_uncertainty_score":0.008332908},"labels":[],"label_agreement":null},{"id":"W2016284633","doi":"10.1038/modpathol.3800740","title":"Prognostic significance of mammalian sterile20-like kinase 1 in colorectal cancer","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Novartis Foundation","keywords":"Colorectal cancer; Medicine; Tissue microarray; Stage (stratigraphy); Oncology; Internal medicine; Cancer; Immunohistochemistry; Survival analysis; Pathology; Biology","score_opus":0.012890738333197834,"score_gpt":0.26112604721191063,"score_spread":0.24823530887871278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016284633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99640936,0.0015131681,0.00029072852,0.00014425056,0.000024738378,0.000004767708,0.00022383485,0.000020479636,0.0013687096],"genre_scores_gemma":[0.99937314,0.00015242658,0.00012214064,0.000015092823,0.000024504307,0.0000030908075,0.00014270184,0.0000025231056,0.00016440099],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981254,0.00005050949,0.000018742325,0.000033676235,0.000035681824,0.000048980226],"domain_scores_gemma":[0.9988845,0.00023804259,0.00038683997,0.0000676129,0.00008674254,0.000336295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055856426,0.0002274156,0.00023707811,0.001075031,0.00031551963,0.000451162,0.00025841114,0.0004570845,0.0017465673],"category_scores_gemma":[0.001777239,0.00014415728,0.00017626146,0.00069601304,0.0004062068,0.00039205188,0.00033919877,0.00033177485,0.00026414287],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012684893,0.0000194263,0.975394,0.000047975987,0.000048317186,0.0008773389,0.00004719576,0.00022843118,0.014390731,0.00019201306,0.0002971535,0.007188915],"study_design_scores_gemma":[0.000028868004,0.0002263033,0.98922604,0.00000806708,0.00010191916,0.003518356,0.00013595022,0.0013442544,0.003719885,0.0003421341,0.0013376831,0.00001046763],"about_ca_topic_score_codex":0.0003716073,"about_ca_topic_score_gemma":0.00087501615,"teacher_disagreement_score":0.0017465673,"about_ca_system_score_codex":0.00033554362,"about_ca_system_score_gemma":0.00021240096,"threshold_uncertainty_score":0.0058428645},"labels":[],"label_agreement":null},{"id":"W2017007462","doi":"10.1038/modpathol.3880425","title":"An Immunophenotypic and Molecular Study of Primary Large B-Cell Lymphoma of Bone","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto; Sunnybrook Health Science Centre; Mount Sinai Hospital","funders":"","keywords":"Lymphoma; Germinal center; Pathology; CD30; Biology; Immunophenotyping; Gene rearrangement; Primary bone; B cell; Large cell; Cancer research; Antibody; Medicine; Gene; Molecular biology; Immunology; Cancer; Genetics; Adenocarcinoma; Flow cytometry","score_opus":0.009929034926959207,"score_gpt":0.24860397659356967,"score_spread":0.23867494166661046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017007462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98824024,0.0022375765,0.0019740236,0.00030540457,0.000028589633,0.00007902301,0.0001816338,0.00004662732,0.0069069704],"genre_scores_gemma":[0.9977029,0.0005293244,0.0009149635,0.000103560116,0.000048141097,0.000019818075,0.00015039554,0.000007887929,0.00052306225],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997023,0.000051643485,0.000029826682,0.000051710067,0.000059358863,0.00010517973],"domain_scores_gemma":[0.9995247,0.0001718226,0.000043174765,0.00004660356,0.00010157189,0.00011217108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048425206,0.00039661032,0.0003349635,0.002090968,0.00067311485,0.0005436199,0.00045992716,0.00071354234,0.002307998],"category_scores_gemma":[0.0009238696,0.0003486744,0.00027067805,0.0007292291,0.0006343437,0.00063079514,0.00052935584,0.0003809489,0.00048899895],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002331955,0.00041789256,0.24977836,0.00034611754,0.00012296194,0.13710386,0.0006950137,0.0005041742,0.57926625,0.0018734792,0.000981039,0.026578974],"study_design_scores_gemma":[0.00019513964,0.0014127762,0.5032205,0.000046074943,0.0003260963,0.40627822,0.0014947179,0.0027710043,0.07166142,0.0017979199,0.010764087,0.000031961994],"about_ca_topic_score_codex":0.0014700993,"about_ca_topic_score_gemma":0.0011470485,"teacher_disagreement_score":0.002307998,"about_ca_system_score_codex":0.00040704914,"about_ca_system_score_gemma":0.0004618171,"threshold_uncertainty_score":0.0077210665},"labels":[],"label_agreement":null},{"id":"W2017675802","doi":"10.1038/modpathol.2008.37","title":"Glypican-3 is overexpressed in lung squamous cell carcinoma, but not in adenocarcinoma","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"National Cancer Institute; Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Pathology; Adenocarcinoma; Glypican 3; Basal cell; Lung; Medicine; Carcinoma; Lung cancer; Squamous-cell carcinoma of the lung; Cancer research; Cancer; Oncology; Internal medicine; Immunohistochemistry","score_opus":0.017860320415161522,"score_gpt":0.2504198504707336,"score_spread":0.2325595300555721,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017675802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984718,0.0005408321,0.00022031086,0.00003688336,0.000011340323,0.0000041662897,0.00015664003,0.000021560109,0.000536475],"genre_scores_gemma":[0.9985037,0.0002146739,0.00024461973,0.000025025873,0.0000072930775,0.0000060373814,0.00032592722,0.0000060294983,0.0006668543],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999876,0.000014715827,0.000010374377,0.000022806276,0.00004179877,0.000034220186],"domain_scores_gemma":[0.9997485,0.000044922952,0.00006192052,0.00002406796,0.000036373574,0.000084161715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111709,0.00022034463,0.0002801463,0.0007326259,0.00033088945,0.00037973517,0.0001810502,0.00029640866,0.0013692303],"category_scores_gemma":[0.00029987152,0.00020998738,0.00022985689,0.0005376962,0.0002711792,0.00018382768,0.00024529555,0.00028707954,0.000348896],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005002494,0.000017617724,0.020657664,0.00003556666,0.000039825132,0.0013147761,0.00004538766,0.00004005195,0.9758915,0.000055494467,0.00009089084,0.0013110704],"study_design_scores_gemma":[0.000052398525,0.00024523225,0.667077,0.0000088916695,0.00014340413,0.015336891,0.0004281109,0.0012860555,0.31269822,0.00034024668,0.002362109,0.000021439848],"about_ca_topic_score_codex":0.0016982809,"about_ca_topic_score_gemma":0.0014729847,"teacher_disagreement_score":0.0016982809,"about_ca_system_score_codex":0.0002622693,"about_ca_system_score_gemma":0.00020871447,"threshold_uncertainty_score":0.0045805573},"labels":[],"label_agreement":null},{"id":"W2017745096","doi":"10.1038/modpathol.3800247","title":"Pulmonary pathology of severe acute respiratory syndrome in Toronto","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":349,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Mount Sinai Hospital; University Health Network; Toronto Public Health","funders":"University of Toronto; University Health Network","keywords":"Pathology; Medicine; Diffuse alveolar damage; Autopsy; Lung; CD68; Immunohistochemistry; Internal medicine","score_opus":0.04186878939028611,"score_gpt":0.3974018903407815,"score_spread":0.3555331009504954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017745096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870587,0.0016335084,0.000100889345,0.0005595273,0.000026455378,0.000038357422,0.0006996276,0.000011752396,0.009871221],"genre_scores_gemma":[0.99782664,0.0006713413,0.0000756581,0.00005474948,0.000025055742,0.000006146067,0.00017448784,0.0000019699125,0.0011639335],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995503,0.00006152432,0.00004899872,0.00004986075,0.00012860305,0.00016072868],"domain_scores_gemma":[0.9989618,0.000099782184,0.00022068359,0.000034025903,0.0003144741,0.00036920415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029232388,0.00027311585,0.00016121649,0.0015371228,0.0023378704,0.00078236335,0.0005410087,0.00037215507,0.0039049624],"category_scores_gemma":[0.001223672,0.00026679947,0.00016560809,0.0015330752,0.0008198086,0.0003524062,0.0010338997,0.00034972504,0.00030917878],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019705594,0.000057037134,0.96385443,0.00015186667,0.000027929744,0.015154753,0.005018409,0.0002841665,0.0025993905,0.0007332949,0.001669542,0.010252199],"study_design_scores_gemma":[0.0000058660553,0.00007192696,0.99158746,0.00003590565,0.000011515076,0.0038403727,0.0025776161,0.00012689417,0.00014169724,0.00005220949,0.0015400287,0.000008442287],"about_ca_topic_score_codex":0.7693565,"about_ca_topic_score_gemma":0.88547355,"teacher_disagreement_score":0.23064351,"about_ca_system_score_codex":0.009646759,"about_ca_system_score_gemma":0.008940418,"threshold_uncertainty_score":0.46400362},"labels":[],"label_agreement":null},{"id":"W2017894589","doi":"10.1038/modpathol.3800475","title":"Uterine tumors resembling ovarian sex cord tumors are polyphenotypic neoplasms with true sex cord differentiation","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":166,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"BC Cancer Agency; Eli Lilly and Company","keywords":"CD99; Calretinin; Pathology; Cytokeratin; Biology; Immunohistochemistry; Vimentin; Medicine","score_opus":0.022119074987084996,"score_gpt":0.27985088475236364,"score_spread":0.25773180976527865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017894589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866087,0.0012814652,0.0031261973,0.00012670708,0.00005444274,0.000034756667,0.00017214421,0.000089950205,0.008505641],"genre_scores_gemma":[0.9949722,0.0005625789,0.002455351,0.000046463865,0.00004864493,0.00001005702,0.00013416292,0.00001691258,0.0017536458],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99989355,0.000016669592,0.000010720646,0.000020567462,0.000023090044,0.0000353201],"domain_scores_gemma":[0.99963796,0.00008494113,0.00013375023,0.00007243662,0.000022391441,0.000048483183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118359334,0.00023507104,0.00018852294,0.00059815374,0.00032381876,0.00041974292,0.0002321968,0.00038368738,0.0017729669],"category_scores_gemma":[0.0005820292,0.0002045385,0.00014685595,0.00043100573,0.00048037205,0.00043444056,0.0004423224,0.00032698677,0.00041272864],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019590706,0.00009616673,0.1959723,0.0005250373,0.00015049183,0.14494278,0.00086808926,0.0005699519,0.5481157,0.017974865,0.0013183409,0.08750725],"study_design_scores_gemma":[0.00007380353,0.00047101945,0.22754261,0.000057737507,0.00020196545,0.5932731,0.00067232596,0.001098163,0.14676134,0.005357102,0.024446748,0.000044041448],"about_ca_topic_score_codex":0.00025872423,"about_ca_topic_score_gemma":0.0005052395,"teacher_disagreement_score":0.0017729669,"about_ca_system_score_codex":0.00014139032,"about_ca_system_score_gemma":0.00018024012,"threshold_uncertainty_score":0.0059311986},"labels":[],"label_agreement":null},{"id":"W2018580776","doi":"10.1038/modpathol.3800792","title":"Expression of MYCN in pediatric synovial sarcoma","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Synovial sarcoma; Sarcoma; Neuroblastoma; Pathology; Malignant peripheral nerve sheath tumor; Rhabdomyosarcoma; Medicine; Leiomyosarcoma; Oncogene; Ewing's sarcoma; Biology; Cancer research; Immunohistochemistry; Cancer; Internal medicine; Cell cycle; Cell culture","score_opus":0.02061636131256274,"score_gpt":0.290133847664084,"score_spread":0.2695174863515213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018580776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993339,0.0022560256,0.0010890508,0.00006560799,0.0000093647495,0.0000068630047,0.00008619715,0.000017343402,0.0031305852],"genre_scores_gemma":[0.9981704,0.0006226845,0.0008816734,0.00000920602,0.0000059827184,0.0000038845546,0.000052321804,0.000004091787,0.00024985964],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99976784,0.000033531705,0.000038601604,0.000038344366,0.0000758131,0.000045869052],"domain_scores_gemma":[0.99963427,0.00011642897,0.00010670845,0.00002365741,0.000072348674,0.00004661498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036386627,0.00012233267,0.0001670196,0.0008488711,0.00026565115,0.00042138304,0.00014775587,0.0002488652,0.0009498576],"category_scores_gemma":[0.0008592276,0.0001907977,0.00010666549,0.00045739702,0.00046975818,0.0005311974,0.00033092446,0.00021083963,0.00017167086],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009472036,0.000052699743,0.39244205,0.00024446833,0.000047704645,0.032996476,0.00091717305,0.0010715919,0.52728355,0.002838848,0.00058798044,0.040570233],"study_design_scores_gemma":[0.000043427513,0.0005396676,0.4581706,0.000088781235,0.00016645578,0.21789946,0.002330894,0.0054062344,0.2988599,0.0013896618,0.015075044,0.000029815372],"about_ca_topic_score_codex":0.0007146659,"about_ca_topic_score_gemma":0.0010592908,"teacher_disagreement_score":0.0009498576,"about_ca_system_score_codex":0.00046241068,"about_ca_system_score_gemma":0.00033115043,"threshold_uncertainty_score":0.0033550262},"labels":[],"label_agreement":null},{"id":"W2019031851","doi":"10.1038/modpathol.2013.233","title":"Tyrosine kinase receptors as molecular targets in pheochromocytomas and paragangliomas","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Adrenal and Paraganglionic Tumors","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Receptor tyrosine kinase; Tyrosine kinase; Paraganglioma; Pathology; Receptor; Receptor Protein-Tyrosine Kinases; Medicine; Cancer research; Biology; Internal medicine","score_opus":0.007650456375326549,"score_gpt":0.24903948357912056,"score_spread":0.24138902720379402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019031851","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46023303,0.50120866,0.008100974,0.0066161426,0.0007921844,0.000028270495,0.000121628334,0.00015742549,0.022741638],"genre_scores_gemma":[0.9075287,0.08436736,0.001776249,0.00047148636,0.00084866706,0.000017131515,0.00006137191,0.00001996837,0.004909053],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998634,0.000025385109,0.0000084539715,0.000020647438,0.00004672867,0.00003543178],"domain_scores_gemma":[0.9998554,0.00006407329,0.000024435345,0.000009951486,0.000020604037,0.000025528287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038508675,0.0002101504,0.00028707678,0.00052211806,0.00016028625,0.00064882013,0.00037774214,0.00061142736,0.0010477273],"category_scores_gemma":[0.00040663898,0.00015721604,0.00013716356,0.0003104829,0.0005747755,0.0008001526,0.0003185275,0.0009381992,0.00037340636],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020499292,0.00021937283,0.010686179,0.0015797676,0.000114019,0.021896996,0.00054028485,0.0019842568,0.69021624,0.04778787,0.004037534,0.21888754],"study_design_scores_gemma":[0.00040321256,0.0024592783,0.06300808,0.0003625988,0.0005628802,0.09344368,0.0010609796,0.0065397224,0.4596711,0.045207176,0.3271358,0.00014561885],"about_ca_topic_score_codex":0.00032556866,"about_ca_topic_score_gemma":0.00030644346,"teacher_disagreement_score":0.0010477273,"about_ca_system_score_codex":0.00050298165,"about_ca_system_score_gemma":0.00023788417,"threshold_uncertainty_score":0.0036494732},"labels":[],"label_agreement":null},{"id":"W2019038560","doi":"10.1038/modpathol.2012.97","title":"Expression of ERG, an Ets family transcription factor, identifies ERG-rearranged Ewing sarcoma","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Erg; ETS transcription factor family; FLI1; Biology; Fusion gene; Molecular biology; Immunohistochemistry; Transcription factor; Gene rearrangement; Cancer research; Pathology; Gene; Genetics; Medicine; Immunology; Biochemistry","score_opus":0.06175611497285191,"score_gpt":0.30783973233165374,"score_spread":0.24608361735880183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019038560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946597,0.0005599879,0.0012780759,0.000071693285,0.000008114981,0.0000149794805,0.00006562365,0.000021070751,0.0033208989],"genre_scores_gemma":[0.9982268,0.00019416309,0.00071582553,0.000018032599,0.00000486388,0.0000030103095,0.000096062984,0.0000051091433,0.0007360799],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998808,0.000011516058,0.0000139323065,0.000018841278,0.000032121297,0.00004282956],"domain_scores_gemma":[0.9999083,0.00002434931,0.000015252995,0.000012505641,0.00001950181,0.000020059055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016301162,0.00020839114,0.00019089834,0.00089076126,0.00014458514,0.00035583173,0.00014274621,0.00037705209,0.0015150286],"category_scores_gemma":[0.0003568235,0.00014482647,0.00015166438,0.00026753612,0.0003606789,0.0003885429,0.00023044345,0.00018943092,0.0005347036],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005487857,0.00007275996,0.041135028,0.000063617066,0.000018283054,0.013517267,0.00024032334,0.00026667997,0.93320316,0.00071283453,0.00017519179,0.010046047],"study_design_scores_gemma":[0.00008324353,0.0007050225,0.2850276,0.000041335115,0.00013815226,0.13855705,0.0014661755,0.0057754996,0.5586618,0.0021520588,0.007362698,0.00002930232],"about_ca_topic_score_codex":0.0004737249,"about_ca_topic_score_gemma":0.0006538047,"teacher_disagreement_score":0.0015150286,"about_ca_system_score_codex":0.00020943751,"about_ca_system_score_gemma":0.00011820256,"threshold_uncertainty_score":0.005068302},"labels":[],"label_agreement":null},{"id":"W2019498472","doi":"10.1038/modpathol.3880120","title":"Laser Capture Microdissection–Guided Fluorescence In Situ Hybridization and Flow Cytometric Cell Cycle Analysis of Purified Nuclei from Paraffin Sections","year":2000,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Medical Research Council; Medical Research Council Canada; Terry Fox Foundation; Calgary Laboratory Services","keywords":"Fluorescence in situ hybridization; Laser capture microdissection; Biology; Microdissection; Flow cytometry; Population; In situ; Molecular biology; Pathology; Gene; Chromosome; Genetics; Gene expression; Chemistry","score_opus":0.005700663047259416,"score_gpt":0.23092581234211085,"score_spread":0.22522514929485143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019498472","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36580053,0.003882854,0.59248996,0.00065307156,0.00044300745,0.0022118096,0.00989067,0.0034943973,0.021133691],"genre_scores_gemma":[0.35788998,0.004250642,0.58190143,0.000595701,0.00019509747,0.0058043343,0.0106473565,0.0011815382,0.03753384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99955744,0.00003287613,0.000031044376,0.00015885454,0.00011068649,0.00010899706],"domain_scores_gemma":[0.9995788,0.00013534297,0.000043454653,0.00010918457,0.000088596185,0.00004454216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005561967,0.0006753326,0.0006217663,0.0018167987,0.0013962048,0.000628429,0.0013819989,0.0007103704,0.005405418],"category_scores_gemma":[0.00031643087,0.00061742216,0.0005527194,0.0012340724,0.00078396156,0.0006723647,0.0004346514,0.0013118709,0.0022297462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005788053,0.000019922449,0.00007867159,0.00004973661,0.0000049963824,0.000029936986,0.000046274807,0.00005392451,0.9966319,0.0005393436,0.00011138468,0.0023760186],"study_design_scores_gemma":[0.0000615153,0.0001673287,0.0062728045,0.000017371369,0.000032002437,0.00033534813,0.000065629174,0.0018996355,0.97970164,0.00058895774,0.010841898,0.000015858997],"about_ca_topic_score_codex":0.0038402409,"about_ca_topic_score_gemma":0.014032467,"teacher_disagreement_score":0.005405418,"about_ca_system_score_codex":0.0008982731,"about_ca_system_score_gemma":0.0010683745,"threshold_uncertainty_score":0.018082976},"labels":[],"label_agreement":null},{"id":"W2020657349","doi":"10.1038/modpathol.3880144","title":"Blastic Mantle Cell Leukemia: An Unusual Presentation of Blastic Mantle Cell Lymphoma","year":2000,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"BC Cancer Agency","keywords":"Mantle cell lymphoma; Mantle (geology); Pathology; Medicine; Geology; Lymphoma; Geochemistry","score_opus":0.011584102513866127,"score_gpt":0.25106694292858955,"score_spread":0.23948284041472342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020657349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.949714,0.005214624,0.011151927,0.005364929,0.00037798285,0.00035258682,0.00050163065,0.0005891744,0.026733188],"genre_scores_gemma":[0.9945036,0.0007407531,0.0019062298,0.000646925,0.0012204117,0.000039175484,0.00010873231,0.000028802813,0.00080542685],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9992749,0.0001298677,0.00008605213,0.00014423546,0.00010768022,0.00025734756],"domain_scores_gemma":[0.9985098,0.0005423276,0.00023723117,0.00021160212,0.00008699609,0.0004120261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044926532,0.0018515721,0.0015532898,0.0030178132,0.001385499,0.0015183027,0.0013225481,0.005188893,0.0036701995],"category_scores_gemma":[0.004391146,0.0011880441,0.0005930247,0.0017795034,0.0014319727,0.0023960012,0.0017175776,0.0026130825,0.0016261673],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022094294,0.000047801677,0.008770807,0.000046767218,0.000008532015,0.9845062,0.000070090915,0.00012689199,0.002725812,0.00054101093,0.00040050008,0.0025347546],"study_design_scores_gemma":[0.000039534603,0.00007435196,0.004345799,0.0000055498385,0.000010244716,0.99373513,0.000051773935,0.00037526633,0.0005383371,0.00048842217,0.00032699862,0.000008595266],"about_ca_topic_score_codex":0.0005158119,"about_ca_topic_score_gemma":0.00043715828,"teacher_disagreement_score":0.005188893,"about_ca_system_score_codex":0.00074860983,"about_ca_system_score_gemma":0.00043182765,"threshold_uncertainty_score":0.01227802},"labels":[],"label_agreement":null},{"id":"W2021145375","doi":"10.1038/modpathol.2011.94","title":"Letter to the editor regarding ‘Roh MH, Lassin Y, Miron A et al. High-grade fimbrial-ovarian carcinomas are unified by p53, PTEN and PAX2 expression‘","year":2011,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary; University Health Network; Vancouver General Hospital","funders":"","keywords":"PTEN; P53 expression; Cancer research; Biology; Immunohistochemistry; Pathology; Medicine; Apoptosis; Genetics","score_opus":0.025608893746863745,"score_gpt":0.2528406039920003,"score_spread":0.22723171024513655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021145375","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005495308,0.001960729,0.00007769316,0.95192134,0.043245763,0.000011020338,0.000077446384,0.000033703458,0.0021227242],"genre_scores_gemma":[0.004819797,0.001965501,0.0002000566,0.90600836,0.080501236,0.000026432755,0.00006678275,0.000028983346,0.006382877],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982798,0.000506814,0.00022211467,0.00027899648,0.00048180675,0.00023043535],"domain_scores_gemma":[0.9967842,0.0015178311,0.0003104252,0.00009232946,0.0008450795,0.00045018064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017973379,0.00073697756,0.0012746467,0.00076786807,0.0022107416,0.0024915661,0.0013125133,0.023668438,0.0046479744],"category_scores_gemma":[0.015115387,0.0006730914,0.00088414334,0.00072509557,0.0015482708,0.0024643089,0.00086402276,0.022056771,0.004956085],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051092233,0.000025282625,0.0005029568,0.000040700805,0.000011211888,0.0022144308,0.000055064775,0.000041883442,0.00008711495,0.0005265748,0.9916039,0.0048397933],"study_design_scores_gemma":[0.00016400249,0.00010300275,0.0026514388,0.0003150123,0.00006038282,0.009088287,0.00037235348,0.0004960709,0.0003341491,0.004516433,0.9817978,0.00010122138],"about_ca_topic_score_codex":0.0034519222,"about_ca_topic_score_gemma":0.00660669,"teacher_disagreement_score":0.023668438,"about_ca_system_score_codex":0.0028130636,"about_ca_system_score_gemma":0.0023469063,"threshold_uncertainty_score":0.02041024},"labels":[],"label_agreement":null},{"id":"W2022023878","doi":"10.1038/modpathol.3800759","title":"A variant TMPRSS2 isoform and ERG fusion product in prostate cancer with implications for molecular diagnosis","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":130,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; McGill University; McGill University Health Centre","funders":"National Cancer Institute; National Institutes of Health","keywords":"TMPRSS2; Prostate cancer; Fusion gene; Prostate; Biology; Erg; Fusion transcript; Gene isoform; Cancer research; Chromoplexy; PCA3; Cancer; Genetics; Gene; Pathology; Medicine","score_opus":0.02335603275979903,"score_gpt":0.33857595824291675,"score_spread":0.3152199254831177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022023878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937144,0.0013178887,0.0007099386,0.0007263166,0.00009364568,0.000015915675,0.0002130745,0.000060811937,0.003147947],"genre_scores_gemma":[0.99907565,0.00012029827,0.00017975848,0.00007332502,0.00006253533,0.0000019996062,0.000077733755,0.000006952234,0.00040175882],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9997532,0.000027624355,0.000028564948,0.00006138611,0.00004617398,0.00008306039],"domain_scores_gemma":[0.9993685,0.00022208544,0.00010282283,0.00005669282,0.00007349004,0.0001764775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031766077,0.00066437357,0.0005262691,0.0013707607,0.0007850077,0.0007650221,0.00097498717,0.0021019531,0.0026841136],"category_scores_gemma":[0.0012855504,0.00036558218,0.0005507027,0.000825059,0.0011321887,0.0006266811,0.00046334387,0.0010239088,0.00056925556],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027777269,0.00014289632,0.051484764,0.0000763927,0.00006937939,0.88430357,0.00028827006,0.0005818835,0.053038884,0.0012229991,0.001135298,0.0048779063],"study_design_scores_gemma":[0.000066348664,0.0004502983,0.09406315,0.000009746127,0.0001334581,0.88847953,0.00033565782,0.001806838,0.011942709,0.0010386152,0.001636645,0.00003695375],"about_ca_topic_score_codex":0.0028143893,"about_ca_topic_score_gemma":0.001674911,"teacher_disagreement_score":0.0028143893,"about_ca_system_score_codex":0.0006759743,"about_ca_system_score_gemma":0.0004168329,"threshold_uncertainty_score":0.008979261},"labels":[],"label_agreement":null},{"id":"W2022742795","doi":"10.1038/modpathol.3800296","title":"Reduced PTEN expression predicts relapse in patients with breast carcinoma treated by tamoxifen","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":144,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Royal University Hospital Foundation","keywords":"PTEN; Tensin; Breast cancer; Tamoxifen; Antiestrogen; Cancer research; Estrogen receptor; Medicine; Breast carcinoma; Oncology; Internal medicine; Cancer; Downregulation and upregulation; Immunohistochemistry; Biology; PI3K/AKT/mTOR pathway; Apoptosis; Gene","score_opus":0.004289493571978231,"score_gpt":0.19821856817557984,"score_spread":0.19392907460360162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022742795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998993,0.00023152903,0.00005198284,0.00010954789,0.000014042161,0.0000023619682,0.00008281625,0.0000066259345,0.0005080673],"genre_scores_gemma":[0.99947256,0.00011613736,0.000027827971,0.000033379587,0.000028656616,0.0000029325713,0.00013135785,0.000002337441,0.0001848458],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99987507,0.000027938439,0.000012268932,0.000021299815,0.000026884305,0.00003641747],"domain_scores_gemma":[0.99932015,0.00018981584,0.00022897382,0.000039533952,0.000039432925,0.00018212052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024725313,0.000301689,0.00042734333,0.0006957852,0.00038795164,0.0005881229,0.00038281744,0.000682553,0.0015875001],"category_scores_gemma":[0.0016106678,0.00021178115,0.00036803592,0.0006636094,0.00037792622,0.00033331945,0.00028584615,0.00058045343,0.0003006674],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006600388,0.000049029946,0.99337995,0.000009054099,0.000043428514,0.0004572633,0.000052843297,0.000073277835,0.0026660846,0.00003503628,0.00016058463,0.002413462],"study_design_scores_gemma":[0.000013193493,0.00018385143,0.9966209,0.000003381245,0.00008705108,0.0019425936,0.00013174639,0.00036297372,0.00034304234,0.00007345277,0.00023315144,0.0000047699027],"about_ca_topic_score_codex":0.001053359,"about_ca_topic_score_gemma":0.0016020507,"teacher_disagreement_score":0.0015875001,"about_ca_system_score_codex":0.0001849471,"about_ca_system_score_gemma":0.00023829007,"threshold_uncertainty_score":0.005310774},"labels":[],"label_agreement":null},{"id":"W2023011880","doi":"10.1038/modpathol.2008.96","title":"Absence of TMPRSS2:ERG fusions and PTEN losses in prostate cancer is associated with a favorable outcome","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":278,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; Astellas Pharma; American Urological Association Foundation; U.S. Department of Defense","keywords":"TMPRSS2; Erg; PTEN; Prostate cancer; Fusion gene; Prostate; Cancer research; Medicine; Cancer; Biology; Internal medicine; Oncology; Gene; Genetics; Ophthalmology","score_opus":0.05093665690103059,"score_gpt":0.3308141187015916,"score_spread":0.279877461800561,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023011880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99761873,0.00040297303,0.0002730305,0.00014045177,0.000018834613,0.0000061430173,0.00013286385,0.000020680334,0.0013862818],"genre_scores_gemma":[0.9995228,0.00008991488,0.00006645974,0.000016798975,0.00002911252,0.000002484711,0.00011388288,0.0000035085118,0.00015505082],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99959916,0.00007261336,0.000042385305,0.0000628475,0.00009790971,0.00012507326],"domain_scores_gemma":[0.9974139,0.0005548096,0.0009587621,0.00014053652,0.0001306181,0.00080128387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049053767,0.00044843103,0.0005959422,0.001576531,0.0006714586,0.000683849,0.0006497062,0.000771341,0.0023852035],"category_scores_gemma":[0.0021475407,0.00030886,0.00043011323,0.0010643131,0.0010559075,0.00042623896,0.00062828953,0.00082565163,0.0003633195],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035103834,0.00021179358,0.9304875,0.000062781306,0.0001642219,0.021959597,0.00010263257,0.00037353017,0.03546269,0.00035642192,0.0003961964,0.0069122934],"study_design_scores_gemma":[0.000025316918,0.000431972,0.9274758,0.0000069167468,0.00016898199,0.06714962,0.00016137575,0.0006978672,0.0028331752,0.00053837843,0.0004821237,0.000028376977],"about_ca_topic_score_codex":0.0006765724,"about_ca_topic_score_gemma":0.00080901507,"teacher_disagreement_score":0.0023852035,"about_ca_system_score_codex":0.00022040156,"about_ca_system_score_gemma":0.00050831056,"threshold_uncertainty_score":0.007979274},"labels":[],"label_agreement":null},{"id":"W2023612965","doi":"10.1038/modpathol.2008.29","title":"Giant cell tumor of bone express p63","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Ottawa Hospital; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Pathology; Giant-cell tumor of bone; Hematopathology; Medicine; Giant cell; Biology","score_opus":0.023047708593892484,"score_gpt":0.24536718198525068,"score_spread":0.22231947339135819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023612965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94725907,0.013814724,0.0049590473,0.0014413267,0.00025100927,0.000030484003,0.00025513867,0.00023817539,0.031750984],"genre_scores_gemma":[0.9905607,0.0018617896,0.0023969875,0.00010913262,0.00012839507,0.000009001707,0.00012745263,0.000026937,0.004779668],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997873,0.000021855472,0.00002169019,0.00003295898,0.00009099597,0.000045326466],"domain_scores_gemma":[0.99957997,0.00011781366,0.00009469148,0.00006236935,0.000094016155,0.00005113745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001966004,0.00023303852,0.000268659,0.000832426,0.0003557805,0.0007828671,0.00021018008,0.0006478118,0.0021362577],"category_scores_gemma":[0.0007100685,0.00021132668,0.00017154602,0.0006887482,0.00041642284,0.00091746775,0.00050221104,0.0005088925,0.0010884472],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004984107,0.0000705654,0.036395054,0.0002590917,0.000052036827,0.036850724,0.00063820335,0.00018378801,0.87981707,0.00445488,0.0013885297,0.039391723],"study_design_scores_gemma":[0.00016889282,0.00067853526,0.15723279,0.00011161766,0.00033544414,0.27433637,0.0026171894,0.0024987177,0.47203073,0.015065066,0.07485525,0.00006946538],"about_ca_topic_score_codex":0.0006143194,"about_ca_topic_score_gemma":0.0010402476,"teacher_disagreement_score":0.0021362577,"about_ca_system_score_codex":0.0002807803,"about_ca_system_score_gemma":0.00019634266,"threshold_uncertainty_score":0.0071464777},"labels":[],"label_agreement":null},{"id":"W2024170532","doi":"10.1038/modpathol.3800555","title":"Chromogenic in-situ hybridization: a viable alternative to fluorescence in-situ hybridization in the HER2 testing algorithm","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"CISH; Chromogenic in situ hybridization; Concordance; Immunohistochemistry; Fluorescence in situ hybridization; Gene duplication; Biology; In situ hybridization; Human Epidermal Growth Factor Receptor 2; Pathology; Molecular biology; Medicine; Cancer; Bioinformatics; Gene; Breast cancer; Genetics; Gene expression","score_opus":0.03722846614933295,"score_gpt":0.32165529426484235,"score_spread":0.2844268281155094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024170532","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008501405,0.002071148,0.9796586,0.0013668443,0.00046769882,0.00011976704,0.000084103965,0.0009770745,0.006753361],"genre_scores_gemma":[0.113895714,0.003336671,0.8751151,0.0006872293,0.0002969623,0.00023380594,0.00014516829,0.00024234559,0.006047058],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977271,0.0011429623,0.00008639944,0.00029291393,0.0006163949,0.00013430788],"domain_scores_gemma":[0.99729747,0.001473267,0.00014708514,0.00039155394,0.0005481072,0.00014254595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0040378952,0.0010727057,0.0010733713,0.002882839,0.00073669315,0.0022317744,0.0024116095,0.0014806582,0.008889351],"category_scores_gemma":[0.0042889714,0.00065705535,0.0008517644,0.0010967604,0.0017937919,0.0015834798,0.0011856745,0.0025308223,0.0022373314],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013628684,0.00027428792,0.011012478,0.0008882522,0.00026822038,0.0021678612,0.00035946662,0.004880713,0.24659173,0.11886051,0.009249359,0.6040842],"study_design_scores_gemma":[0.0003488238,0.0015791389,0.011955468,0.00041862772,0.00077194534,0.03879684,0.00072562037,0.21263233,0.39671922,0.17434724,0.1613155,0.00038930366],"about_ca_topic_score_codex":0.0007990558,"about_ca_topic_score_gemma":0.0016773742,"teacher_disagreement_score":0.008889351,"about_ca_system_score_codex":0.00069017435,"about_ca_system_score_gemma":0.0009402945,"threshold_uncertainty_score":0.02973783},"labels":[],"label_agreement":null},{"id":"W2024536871","doi":"10.1038/modpathol.2014.56","title":"Comment on ‘Testing for ALK rearrangement in lung adenocarcinoma: a multicenter comparison of immunohistochemistry and fluorescent in situ hybridization'","year":2014,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Immunohistochemistry; Fluorescence in situ hybridization; Adenocarcinoma; Pathology; In situ hybridization; Medicine; Lung; Biology; Internal medicine; Cancer; Gene expression","score_opus":0.0329553825973481,"score_gpt":0.3487590623084117,"score_spread":0.3158036797110636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024536871","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010703066,0.000599888,0.00013681751,0.9773591,0.019548377,0.000019841978,0.0001174951,0.00003822264,0.0011099273],"genre_scores_gemma":[0.0033446536,0.00022104871,0.00022478425,0.9725816,0.022231376,0.00003608445,0.000030945277,0.000017505221,0.0013119155],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.98720247,0.0036208103,0.0018787096,0.0020213139,0.0035021314,0.0017745586],"domain_scores_gemma":[0.9706035,0.01848009,0.003103294,0.0007549596,0.004410426,0.0026476176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011496704,0.0011604422,0.0022509743,0.0014585749,0.0035840776,0.0045395712,0.0030326033,0.06637073,0.0025051045],"category_scores_gemma":[0.05599169,0.0016907105,0.0017839695,0.0015948291,0.004855028,0.0033721898,0.0019605006,0.038689367,0.0034529346],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021840655,0.00006139185,0.003398243,0.000091055466,0.000058500624,0.0017224717,0.0002616346,0.00011761212,0.00044565895,0.0014112714,0.98642796,0.005785694],"study_design_scores_gemma":[0.0006651121,0.00061642507,0.016820647,0.0011166009,0.00049808534,0.0064241146,0.0017329997,0.0024099518,0.00243922,0.010020621,0.95674914,0.00050718704],"about_ca_topic_score_codex":0.009297456,"about_ca_topic_score_gemma":0.01687752,"teacher_disagreement_score":0.06637073,"about_ca_system_score_codex":0.0061455606,"about_ca_system_score_gemma":0.00557517,"threshold_uncertainty_score":0.06080115},"labels":[],"label_agreement":null},{"id":"W2025600112","doi":"10.1038/modpathol.3800965","title":"Tumor-specific downregulation and methylation of the CDH13 (H-cadherin) and CDH1 (E-cadherin) genes correlate with aggressiveness of human pituitary adenomas","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Novo Nordisk","keywords":"CDH1; Methylation; Cadherin; DNA methylation; Cancer research; Immunohistochemistry; Pituitary tumors; Downregulation and upregulation; Bisulfite sequencing; Tumor suppressor gene; Pathology; Biology; Cancer; Medicine; Gene; Gene expression; Cell; Internal medicine; Carcinogenesis; Genetics","score_opus":0.009330274465593199,"score_gpt":0.22554412447246477,"score_spread":0.21621385000687157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025600112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988104,0.00042740483,0.00021136203,0.000014625136,0.0000024124859,0.0000028755924,0.0001301038,0.000014724865,0.00038615736],"genre_scores_gemma":[0.9990609,0.00020221961,0.00009316409,0.0000067595665,0.0000037927896,0.0000032980781,0.00017166593,0.0000031086104,0.0004550662],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999455,0.0000064624614,0.0000045357788,0.000011382911,0.000017192848,0.000014908927],"domain_scores_gemma":[0.99980193,0.000039272316,0.000064385065,0.000016706834,0.000024454344,0.000053279397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006978407,0.00012566135,0.00017392018,0.00068816263,0.00018071524,0.00030438395,0.000074641306,0.00011146851,0.001042538],"category_scores_gemma":[0.000249094,0.00016429274,0.00009443046,0.00037811577,0.0002259065,0.000102899205,0.0001491748,0.00022689946,0.00014057606],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007606295,0.00003550367,0.087878026,0.000027899405,0.000029025456,0.0005935754,0.00016808684,0.00007657391,0.9065602,0.00012569161,0.00009360155,0.0036511538],"study_design_scores_gemma":[0.000009236937,0.000110487745,0.9166356,0.0000012102806,0.000026647336,0.002147542,0.00014657181,0.00019540495,0.079801194,0.00009763323,0.00082211423,0.0000063572693],"about_ca_topic_score_codex":0.0020971429,"about_ca_topic_score_gemma":0.0023646487,"teacher_disagreement_score":0.0020971429,"about_ca_system_score_codex":0.00017501178,"about_ca_system_score_gemma":0.00018403183,"threshold_uncertainty_score":0.0041698217},"labels":[],"label_agreement":null},{"id":"W2026171879","doi":"10.1038/modpathol.3800409","title":"Immunohistochemical detection of cdc2 is useful in predicting survival in patients with mantle cell lymphoma","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Cancer Foundation; University of Alberta","funders":"University of Alberta","keywords":"Mantle cell lymphoma; Immunohistochemistry; International Prognostic Index; Mantle zone; Lymphoma; Tissue microarray; Medicine; Pathology; Internal medicine; Clinical significance; Univariate analysis; Stage (stratigraphy); Oncology; Biology; Cancer research; Germinal center; Diffuse large B-cell lymphoma; Multivariate analysis; Antibody; Immunology; B cell","score_opus":0.006463149020435679,"score_gpt":0.21456663470746837,"score_spread":0.20810348568703269,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026171879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940778,0.002975293,0.00048653726,0.00020308251,0.00003364655,0.000009402035,0.00007931216,0.000027848171,0.0021070517],"genre_scores_gemma":[0.9991167,0.00038158044,0.0002170306,0.000035016612,0.000032598222,0.0000047014937,0.00008845808,0.0000024095648,0.00012152227],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981254,0.000055453456,0.000027434466,0.000019086083,0.000040669205,0.000044923898],"domain_scores_gemma":[0.9989047,0.00055546715,0.00014943354,0.00006686709,0.00015310817,0.00017043011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006506943,0.00035453925,0.00039062955,0.001048677,0.0003057655,0.0005168979,0.00026565522,0.0004665353,0.0007292986],"category_scores_gemma":[0.0022320717,0.00019560025,0.00016719953,0.0005307913,0.0003390176,0.0005593539,0.00023045595,0.0004595301,0.00020935586],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051297434,0.000040859362,0.9810575,0.000026885584,0.000024275,0.0008621494,0.00004830465,0.00015157614,0.005420389,0.000028014634,0.00029056432,0.011536597],"study_design_scores_gemma":[0.00004091728,0.00042312164,0.98058164,0.000022763994,0.0001467501,0.007556207,0.0002201453,0.0037462106,0.0056251045,0.00014726071,0.0014794123,0.000010536383],"about_ca_topic_score_codex":0.0006710626,"about_ca_topic_score_gemma":0.0012804845,"teacher_disagreement_score":0.001048677,"about_ca_system_score_codex":0.00022151036,"about_ca_system_score_gemma":0.00015577931,"threshold_uncertainty_score":0.0034412146},"labels":[],"label_agreement":null},{"id":"W2026392453","doi":"10.1038/modpathol.2008.19","title":"The spectrum of endometrial pathology induced by progesterone receptor modulators","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometriosis Research and Treatment","field":"Medicine","cited_by":233,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Medicine; Progestin; Endometrium; Endometriosis; Hematopathology; Anatomical pathology; Progesterone receptor; Gynecology; Pathology; Estrogen; Internal medicine; Estrogen receptor; Immunohistochemistry; Biology; Breast cancer; Cancer","score_opus":0.036263803392144446,"score_gpt":0.29636503346739884,"score_spread":0.2601012300752544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026392453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92438805,0.04854931,0.0036447386,0.0012837123,0.00008270811,0.000073951596,0.0003499054,0.00015106797,0.021476533],"genre_scores_gemma":[0.98058355,0.01657139,0.0014059993,0.00026342995,0.00009959892,0.000035329664,0.00018927536,0.000012680938,0.0008387034],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995072,0.00016183345,0.000038505146,0.000045964014,0.00013381669,0.00011273537],"domain_scores_gemma":[0.9993906,0.00024904247,0.00013042055,0.000065850494,0.00007202315,0.000091916125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006933318,0.00044939105,0.000623454,0.0021332805,0.00048107663,0.0005415492,0.0002759513,0.0004332297,0.0018013443],"category_scores_gemma":[0.0009024875,0.00022237544,0.0003910396,0.0005874934,0.00056160317,0.00050970184,0.00068422646,0.0005148945,0.00031985244],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0058363355,0.0003142036,0.057688132,0.0006933034,0.00017896053,0.02011087,0.0005894931,0.00060482824,0.7692148,0.007209301,0.0009729823,0.13658668],"study_design_scores_gemma":[0.0004960496,0.0074620564,0.5227999,0.0005205382,0.0006250158,0.17171648,0.0027836505,0.0016917574,0.24048616,0.019781342,0.031550545,0.00008648364],"about_ca_topic_score_codex":0.00010934477,"about_ca_topic_score_gemma":0.00013358894,"teacher_disagreement_score":0.0021332805,"about_ca_system_score_codex":0.0002503218,"about_ca_system_score_gemma":0.00024465512,"threshold_uncertainty_score":0.006026089},"labels":[],"label_agreement":null},{"id":"W2026525499","doi":"10.1038/modpathol.3800554","title":"Association of E-cadherin, matrix metalloproteinases, and tissue inhibitors of metalloproteinases with the progression and metastasis of hepatocellular carcinoma","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Hepatocellular carcinoma; Metastasis; Pathology; Matrix metalloproteinase; Tissue microarray; Medicine; Tissue inhibitor of metalloproteinase; Carcinoma; Cancer; Immunohistochemistry; Tumor progression; Cadherin; Cancer research; Biology; Cell; Internal medicine","score_opus":0.005093479837672337,"score_gpt":0.21832924934022643,"score_spread":0.2132357695025541,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026525499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99300236,0.004965371,0.00086019543,0.00013573997,0.000011811151,0.000008592516,0.0001074437,0.000022459115,0.00088601885],"genre_scores_gemma":[0.9978592,0.0009851139,0.0003025938,0.000014956761,0.000030506959,0.0000067498136,0.00009390337,0.000002585025,0.0007044598],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998209,0.00005538717,0.000014614544,0.00001659735,0.000062608604,0.000029955885],"domain_scores_gemma":[0.99956435,0.00012698166,0.00013512911,0.000036284597,0.000068279056,0.000068981535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003445632,0.00016428756,0.00022149642,0.0009607084,0.00020337499,0.00033761858,0.00017336303,0.00020049557,0.0009322127],"category_scores_gemma":[0.00083705643,0.00013993251,0.00013480522,0.0007091901,0.00031343172,0.0002827788,0.0001647329,0.00035617265,0.00013778753],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0041228454,0.00029823853,0.61334836,0.00022457952,0.00024576057,0.003994522,0.00036205346,0.00063524005,0.33673206,0.0016976881,0.0009439987,0.037394565],"study_design_scores_gemma":[0.00003811402,0.00023024507,0.9647003,0.000006898843,0.00009205259,0.0052809636,0.00016546395,0.0014223974,0.025721608,0.0005430696,0.0017840443,0.000014828551],"about_ca_topic_score_codex":0.0018130151,"about_ca_topic_score_gemma":0.0016484476,"teacher_disagreement_score":0.0018130151,"about_ca_system_score_codex":0.00020827196,"about_ca_system_score_gemma":0.00027623482,"threshold_uncertainty_score":0.003604889},"labels":[],"label_agreement":null},{"id":"W2026921924","doi":"10.1038/modpathol.2008.202","title":"Overexpression of HMGA2 relates to reduction of the let-7 and its relationship to clinicopathological features in pituitary adenomas","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Prolactin; Immunohistochemistry; Pituitary adenoma; Internal medicine; Null cell; Hormone; Endocrinology; HMGA2; Luteinizing hormone; Adenoma; Biology; Medicine; microRNA; Gene","score_opus":0.01571385223183063,"score_gpt":0.27707670641794513,"score_spread":0.2613628541861145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026921924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988022,0.00035919342,0.00027894904,0.000033241096,0.0000071195655,0.0000037002596,0.000058796668,0.000015293886,0.0004414421],"genre_scores_gemma":[0.9995932,0.000077772915,0.00012369263,0.0000072059356,0.000010479167,0.000004274925,0.000050622133,0.0000030969268,0.00012960761],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998534,0.000032624004,0.00002001057,0.000025597177,0.00004191966,0.00002639368],"domain_scores_gemma":[0.9990939,0.00022451777,0.00036535834,0.00007280737,0.000074663774,0.00016867594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021119275,0.00019790565,0.00026923418,0.001413188,0.0003414174,0.0004911117,0.0002684099,0.0003421895,0.0014869324],"category_scores_gemma":[0.00084126927,0.00027900442,0.00025793066,0.00094835064,0.0005425334,0.00022453407,0.0002924619,0.00036663222,0.00023113658],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00637699,0.00012070591,0.55158216,0.00012819505,0.00018048048,0.017925173,0.000485336,0.00032518973,0.41531217,0.0005760963,0.00021699906,0.0067705302],"study_design_scores_gemma":[0.000041188785,0.0003247846,0.9239117,0.000008084096,0.00014582361,0.024857776,0.0005301476,0.00087097095,0.04767875,0.0006313416,0.0009717463,0.000027742124],"about_ca_topic_score_codex":0.0005789246,"about_ca_topic_score_gemma":0.00030378182,"teacher_disagreement_score":0.0014869324,"about_ca_system_score_codex":0.00021984939,"about_ca_system_score_gemma":0.00022855548,"threshold_uncertainty_score":0.004974246},"labels":[],"label_agreement":null},{"id":"W2027014057","doi":"10.1038/modpathol.2014.49","title":"Familial colorectal cancer type X: genetic profiles and phenotypic features","year":2014,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Heredity; Colorectal cancer; Cancer; Medicine; Disease; Epigenetics; Pathology; Phenotype; Cancer syndrome; Oncology; Genetics; Biology; Mutation; Internal medicine; Germline mutation; Gene","score_opus":0.032309786785094934,"score_gpt":0.3312494782179992,"score_spread":0.2989396914329043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027014057","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031161794,0.99868745,0.00012380892,0.00019298213,0.00007553708,0.0000020294738,0.000020389865,0.000004552489,0.0005817186],"genre_scores_gemma":[0.0019428908,0.9972403,0.0002157042,0.00014918398,0.00018253509,0.0000022788922,0.000040827632,8.066728e-7,0.00022548181],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998115,0.00003322861,0.000036224785,0.00004200474,0.000060021495,0.00001697412],"domain_scores_gemma":[0.99948895,0.0002827962,0.00010240031,0.000011165697,0.000080010665,0.00003464331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041534862,0.0006662485,0.0010868582,0.0023652033,0.00016160759,0.0006643479,0.00060709176,0.00063891674,0.0015581524],"category_scores_gemma":[0.000973196,0.00020710599,0.00043880162,0.0023558103,0.00041420083,0.0008149981,0.0005337007,0.00091347937,0.00045280723],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076442826,0.000038855447,0.0029689656,0.011691844,0.00017501527,0.00093415205,0.000066781664,0.000384775,0.0010641023,0.0015755664,0.01686597,0.9641575],"study_design_scores_gemma":[0.000045100533,0.00013570122,0.016706116,0.011978819,0.0011444858,0.021187907,0.00030690862,0.00034637126,0.0007732159,0.0036648435,0.9436325,0.00007811967],"about_ca_topic_score_codex":0.0013455311,"about_ca_topic_score_gemma":0.002208146,"teacher_disagreement_score":0.0023652033,"about_ca_system_score_codex":0.00036930945,"about_ca_system_score_gemma":0.0007279425,"threshold_uncertainty_score":0.0052125454},"labels":[],"label_agreement":null},{"id":"W2027291775","doi":"10.1038/modpathol.2015.2","title":"Overdiagnosis of high-grade dysplasia in Barrett's esophagus: a multicenter, international study","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Esophageal Cancer Research and Treatment","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre","funders":"","keywords":"Overdiagnosis; Medicine; Barrett's esophagus; Dysplasia; Esophagus; Pathology; Multicenter study; General surgery; Radiology; Internal medicine; Adenocarcinoma","score_opus":0.0407174233111715,"score_gpt":0.3478581126307691,"score_spread":0.3071406893195976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027291775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909794,0.00027154924,0.000068731584,0.000040108098,0.000010240882,0.000016082724,0.0001142896,0.0000016593979,0.00037934858],"genre_scores_gemma":[0.9994842,0.000100411664,0.00006116853,0.00005710774,0.000022246695,0.0000096834465,0.00019773314,0.000002432477,0.00006490227],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99656457,0.0016679327,0.00029431612,0.0007995075,0.00038946807,0.00028431095],"domain_scores_gemma":[0.99228644,0.0017510192,0.0031064164,0.0010259522,0.0008976271,0.0009326193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036855761,0.00085472915,0.0007745325,0.0013857293,0.0010743036,0.0018550149,0.0010103558,0.0013829167,0.0014731769],"category_scores_gemma":[0.0092032375,0.0007071529,0.0010112913,0.001969248,0.0013093506,0.00146018,0.0011942914,0.0010506905,0.0003067325],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003740195,0.00008480403,0.99831957,0.000011475039,0.00012322686,0.00006486166,0.00024073738,0.000009417036,0.00015234665,0.000013160691,0.00005615627,0.00055015914],"study_design_scores_gemma":[0.00005371425,0.00027403218,0.9977518,0.000012367647,0.00021831463,0.00038157045,0.00096893765,0.00007140857,0.00006536897,0.000018810559,0.00017576654,0.000007874681],"about_ca_topic_score_codex":0.005668443,"about_ca_topic_score_gemma":0.005408993,"teacher_disagreement_score":0.005668443,"about_ca_system_score_codex":0.00062956713,"about_ca_system_score_gemma":0.0005005312,"threshold_uncertainty_score":0.019491434},"labels":[],"label_agreement":null},{"id":"W2027430364","doi":"10.1038/modpathol.2010.127","title":"Pancreatic endocrine tumors","year":2011,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Histogenesis; Pathology; Pancreas; Endocrine system; Immunohistochemistry; Gastrointestinal tract; Molecular pathology; Biology; Medicine; Internal medicine; Endocrinology","score_opus":0.08925780296375578,"score_gpt":0.38674889109157723,"score_spread":0.29749108812782143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027430364","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024579087,0.99438924,0.00033100118,0.00044017247,0.0007325836,0.000006976728,0.000028882483,0.000020039633,0.003805298],"genre_scores_gemma":[0.0016315933,0.99345547,0.0004271494,0.00051959645,0.00089988054,0.0000063938637,0.00007994164,0.000003284193,0.0029766818],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998673,0.000016247059,0.000021284846,0.000026239824,0.000052766532,0.00001601764],"domain_scores_gemma":[0.9997899,0.00007172291,0.00004050131,0.000010813309,0.00005481458,0.000032224078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030158288,0.00097456045,0.0011102442,0.0022569378,0.0002207705,0.0008387835,0.00048794923,0.000602529,0.004446066],"category_scores_gemma":[0.000588629,0.0002492867,0.00031785286,0.002308758,0.0004339853,0.0014295045,0.00077191164,0.0014386264,0.0029952032],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041380703,0.00002519332,0.00024284868,0.0036196567,0.000029283574,0.00070444983,0.000020706944,0.00019052395,0.0013324325,0.0006560423,0.03847701,0.9546604],"study_design_scores_gemma":[0.000017095415,0.000044615812,0.0011014182,0.0019964469,0.00011390744,0.007118269,0.00005517652,0.00009038956,0.00058296724,0.00090408226,0.9879601,0.000015646023],"about_ca_topic_score_codex":0.0006967192,"about_ca_topic_score_gemma":0.0017303326,"teacher_disagreement_score":0.004446066,"about_ca_system_score_codex":0.00048192067,"about_ca_system_score_gemma":0.00084651774,"threshold_uncertainty_score":0.014873564},"labels":[],"label_agreement":null},{"id":"W2027645950","doi":"10.1038/modpathol.2013.90","title":"The alternative lengthening of telomere phenotype is significantly associated with loss of ATRX expression in high-grade pediatric and adult astrocytomas: a multi-institutional study of 214 astrocytomas","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute; National Institutes of Health; National Institute of Neurological Disorders and Stroke; University of California, San Francisco; James S. McDonnell Foundation","keywords":"ATRX; Astrocytoma; Pathology; Phenotype; Biology; Immunohistochemistry; Telomere; Cancer research; Medicine; Glioma; Mutation; Gene; Genetics","score_opus":0.017530215107749422,"score_gpt":0.2527738174629608,"score_spread":0.23524360235521136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027645950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9998242,0.000030535455,0.000037980288,0.0000023682574,6.113556e-7,0.0000015807154,0.000041527026,0.0000013701193,0.000059832975],"genre_scores_gemma":[0.9997764,0.000028280672,0.000042032036,0.0000028395514,0.0000019538913,0.0000025072577,0.000100887904,0.0000015795564,0.00004363236],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99968576,0.000055048476,0.000050572682,0.000084571744,0.000055136217,0.00006888314],"domain_scores_gemma":[0.9991192,0.00013050406,0.00043223175,0.0000983768,0.00009894028,0.00012063612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002490869,0.00024067983,0.00034484646,0.0010477833,0.0005770282,0.000528593,0.00035320804,0.0002683022,0.0009146973],"category_scores_gemma":[0.0009390514,0.0003182231,0.00033592177,0.0010105786,0.00034317403,0.00031332925,0.0003889548,0.00028526707,0.000222183],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002136189,0.000030738553,0.99325836,0.000007617968,0.0000381408,0.00092462765,0.00015845013,0.00003189745,0.0043602968,0.000014540484,0.000029347386,0.0009324717],"study_design_scores_gemma":[0.000004104373,0.000103635764,0.99305314,0.0000017740872,0.000036281348,0.0055005336,0.000365608,0.00009206144,0.0006866892,0.000014046296,0.00013811099,0.0000040085997],"about_ca_topic_score_codex":0.0015894453,"about_ca_topic_score_gemma":0.0018709672,"teacher_disagreement_score":0.0015894453,"about_ca_system_score_codex":0.0002272465,"about_ca_system_score_gemma":0.00021079642,"threshold_uncertainty_score":0.0031603575},"labels":[],"label_agreement":null},{"id":"W2027879081","doi":"10.1038/modpathol.3800272","title":"Nuclear beta-catenin in mesenchymal tumors","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Soft tissue tumor case studies","field":"Medicine","cited_by":295,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; University of British Columbia","funders":"Terry Fox Foundation; Michael Smith Health Research BC","keywords":"Tissue microarray; Pathology; Synovial sarcoma; Fibromatosis; Sarcoma; Immunohistochemistry; Catenin; Biology; Fibrosarcoma; Wnt signaling pathway; Medicine; Signal transduction","score_opus":0.021984059676464083,"score_gpt":0.2724616481888853,"score_spread":0.2504775885124212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027879081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9765805,0.0033900293,0.0016412077,0.00056974264,0.000045782046,0.000045436773,0.0001211541,0.00008837463,0.01751775],"genre_scores_gemma":[0.9976427,0.0007761072,0.00046886766,0.00004784628,0.00007075627,0.0000071560107,0.000029585835,0.000010837473,0.00094617857],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997155,0.00004258067,0.000043013704,0.0000489567,0.00007393658,0.00007597995],"domain_scores_gemma":[0.9994325,0.00022734731,0.00012931247,0.000069890164,0.000034601435,0.00010645285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043878678,0.000734695,0.00038988437,0.0032866986,0.0011280274,0.0012070346,0.00076744374,0.0017945819,0.0037679148],"category_scores_gemma":[0.0013977309,0.00062612793,0.00041391348,0.0013345552,0.0018962784,0.0010615491,0.0007887291,0.000748632,0.00077646197],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021472937,0.000032156997,0.014826609,0.00009745353,0.000021354072,0.96540725,0.0004609498,0.00018569529,0.013322377,0.0015659011,0.00018243493,0.003683075],"study_design_scores_gemma":[0.000009487398,0.000043768694,0.0071634585,0.000012145032,0.000035014284,0.9865377,0.00020017788,0.00023659033,0.004129512,0.00045339586,0.0011713663,0.000007353356],"about_ca_topic_score_codex":0.0010440109,"about_ca_topic_score_gemma":0.0014759543,"teacher_disagreement_score":0.0037679148,"about_ca_system_score_codex":0.0005930479,"about_ca_system_score_gemma":0.00029485702,"threshold_uncertainty_score":0.012604892},"labels":[],"label_agreement":null},{"id":"W2028675262","doi":"10.1038/modpathol.2011.120","title":"Clinical and pathological analysis of colonic Crohn's disease, including a subgroup with ulcerative colitis-like features","year":2011,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Ulcerative colitis; Pathological; Medicine; Pathology; Crohn's disease; Disease","score_opus":0.028232587514027414,"score_gpt":0.28762239543787815,"score_spread":0.25938980792385075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028675262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988172,0.000269347,0.0000824184,0.000027774207,0.000003510803,0.0000074142254,0.0000713316,0.0000043546347,0.00071675424],"genre_scores_gemma":[0.9995493,0.00008880404,0.00012258171,0.000015111443,0.000015524083,0.0000047694684,0.00011273302,0.0000018791246,0.00008923029],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997347,0.00006369394,0.000042326013,0.00006338031,0.00003890073,0.00005709406],"domain_scores_gemma":[0.99938774,0.00016976858,0.00012407842,0.000047002606,0.00006334019,0.00020801392],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028723475,0.00034576442,0.00042668148,0.0017393114,0.0006265975,0.0004374493,0.00017746742,0.00039340995,0.001392886],"category_scores_gemma":[0.0013850717,0.0001938354,0.00022965488,0.0010006907,0.00051372114,0.00033120537,0.0003483036,0.00022596399,0.00027898315],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018383095,0.00010030905,0.96480465,0.000034646248,0.000037181413,0.008274334,0.00019156747,0.00008400893,0.018675264,0.00007893241,0.00015804142,0.0057226564],"study_design_scores_gemma":[0.000013857208,0.0002744142,0.97798216,0.0000046807054,0.000030956624,0.020419449,0.00023128981,0.00015989122,0.000529946,0.00008071341,0.00026600208,0.0000065648924],"about_ca_topic_score_codex":0.0007157363,"about_ca_topic_score_gemma":0.00071273325,"teacher_disagreement_score":0.0017393114,"about_ca_system_score_codex":0.000186485,"about_ca_system_score_gemma":0.00018847497,"threshold_uncertainty_score":0.004659593},"labels":[],"label_agreement":null},{"id":"W2029497465","doi":"10.1097/01.mp.0000068237.38715.d9","title":"Leiomyosarcoma of Urinary Bladder Following Cyclophosphamide Therapy: Report of Two Cases","year":2003,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Credit Valley Hospital; Université Laval; Hôtel-Dieu de Québec","funders":"","keywords":"Cyclophosphamide; Medicine; Leiomyosarcoma; Cystoprostatectomy; Urinary bladder; Cystectomy; Pathology; Urinary system; Bladder cancer; Urology; Chemotherapy; Cancer; Internal medicine","score_opus":0.03199609241141147,"score_gpt":0.3170615016649194,"score_spread":0.28506540925350793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029497465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9744577,0.0035341973,0.00669504,0.0018173102,0.00057124166,0.00045190315,0.00037372875,0.00037763608,0.0117213195],"genre_scores_gemma":[0.99143535,0.0011708635,0.0023519609,0.0005535791,0.0011908703,0.00014145138,0.00016383176,0.000061958584,0.002930072],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9979417,0.0002539645,0.00025279855,0.00045159875,0.00023378439,0.0008661468],"domain_scores_gemma":[0.990999,0.0031240373,0.0016117054,0.0013987316,0.00035600588,0.0025105157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012059088,0.004131827,0.0020414304,0.0050004194,0.004476775,0.0023153874,0.0044438797,0.009950797,0.004276584],"category_scores_gemma":[0.011076087,0.0029829636,0.0028812836,0.0023522791,0.00598441,0.0031342292,0.004156153,0.0041460586,0.0026230647],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084961,0.00011649719,0.003944578,0.000033936838,0.000014856054,0.993764,0.00029883353,0.00007104935,0.00052296807,0.00010503877,0.000114723225,0.0009286061],"study_design_scores_gemma":[0.00005551061,0.00024055195,0.007600973,0.000014689641,0.00003340952,0.98997456,0.00023512192,0.000253742,0.000980285,0.00013715561,0.00044431532,0.000029520623],"about_ca_topic_score_codex":0.003744328,"about_ca_topic_score_gemma":0.0033033628,"teacher_disagreement_score":0.009950797,"about_ca_system_score_codex":0.0023062704,"about_ca_system_score_gemma":0.0013667132,"threshold_uncertainty_score":0.01673323},"labels":[],"label_agreement":null},{"id":"W2031259832","doi":"10.1038/modpathol.3800728","title":"Significance of lymph vessel invasion identified by the endothelial lymphatic marker D2-40 in node negative breast cancer","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Coalition for Research in Women's Health; Health Sciences Centre; Women's College Hospital; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Lymphovascular invasion; Pathology; Lymphatic system; Lymph node; Medicine; Breast cancer; Lymphatic vessel; CD31; Lymph; Cancer; Immunohistochemistry; Internal medicine; Metastasis","score_opus":0.010411885041994213,"score_gpt":0.25537905163521596,"score_spread":0.24496716659322174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031259832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969632,0.0011070514,0.00019119694,0.000051204224,0.000005336081,0.0000031234838,0.000036627353,0.00000678812,0.0016354551],"genre_scores_gemma":[0.99897623,0.00034394852,0.00011532077,0.00001270694,0.000006218422,0.00000417797,0.000036533896,0.0000020263199,0.0005029252],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999018,0.00003173851,0.0000047136496,0.000013098454,0.00002017455,0.000028509803],"domain_scores_gemma":[0.99983704,0.000055978464,0.000034192428,0.00001691652,0.000021254042,0.00003466645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031251568,0.00015020376,0.00014470873,0.0005630149,0.00018185575,0.0004051937,0.00018279818,0.00025392533,0.0011094825],"category_scores_gemma":[0.000492073,0.00015073719,0.000084051404,0.00027549439,0.00038825462,0.00023687158,0.00022249484,0.0003184941,0.00014429742],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004870187,0.00020927683,0.28199333,0.00015548071,0.000057236684,0.0025574951,0.0003520606,0.0003747905,0.69025356,0.0008403973,0.00029843202,0.018037695],"study_design_scores_gemma":[0.00009452511,0.00078251044,0.8673477,0.000023936715,0.00012096544,0.0083146095,0.0008278936,0.0012292914,0.114037335,0.0012900297,0.005912651,0.000018539491],"about_ca_topic_score_codex":0.0007716295,"about_ca_topic_score_gemma":0.00070536224,"teacher_disagreement_score":0.0011094825,"about_ca_system_score_codex":0.00026452699,"about_ca_system_score_gemma":0.0002066519,"threshold_uncertainty_score":0.0037115812},"labels":[],"label_agreement":null},{"id":"W2033156729","doi":"10.1038/modpathol.2011.145","title":"Loss of DLC1 is an independent prognostic factor in patients with oral squamous cell carcinoma","year":2011,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Oral Health Pathology and Treatment","field":"Dentistry","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto; York University","funders":"Canadian Institutes of Health Research; Mitacs; Indian Council of Medical Research; Department of Biotechnology, Ministry of Science and Technology, India; Department of Science and Technology, Ministry of Science and Technology, India; Ontario Institute for Cancer Research","keywords":"Medicine; Pathology; Dysplasia; Oral mucosa; Immunohistochemistry; Cancer; Carcinoma; Oral and maxillofacial pathology; Internal medicine; Gastroenterology","score_opus":0.03977488024731738,"score_gpt":0.2726793280871357,"score_spread":0.2329044478398183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033156729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963225,0.0017149223,0.00013358421,0.00020858822,0.000029139275,0.000007500834,0.00036300835,0.000016387217,0.0012044342],"genre_scores_gemma":[0.99905723,0.00026478904,0.00006699093,0.000036188245,0.000026733283,0.0000051248708,0.00027880212,0.0000032306132,0.00026103415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997131,0.000038436065,0.000034096985,0.000047134457,0.00009556528,0.00007163846],"domain_scores_gemma":[0.99846494,0.00047389456,0.0005036803,0.000103801925,0.00018646057,0.00026713475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042174733,0.0002799386,0.0005283016,0.0013647433,0.0006589338,0.001043063,0.00056688464,0.0005810197,0.0018356108],"category_scores_gemma":[0.0028751912,0.00024941366,0.0002763726,0.0020267882,0.00051524484,0.00060849887,0.00041704535,0.0007513182,0.0003379989],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003804141,0.000029538107,0.99312043,0.000016482474,0.00003390293,0.00035953944,0.000033212105,0.00007118171,0.0015387668,0.000024766661,0.0002528675,0.0041388236],"study_design_scores_gemma":[0.0000150076285,0.00007694835,0.99655735,0.000006258551,0.00007914158,0.0014827594,0.00016277915,0.00037151694,0.0005324636,0.00009249826,0.00061611104,0.0000071320474],"about_ca_topic_score_codex":0.0026278743,"about_ca_topic_score_gemma":0.0031551789,"teacher_disagreement_score":0.0026278743,"about_ca_system_score_codex":0.00060010096,"about_ca_system_score_gemma":0.00053848146,"threshold_uncertainty_score":0.0061407685},"labels":[],"label_agreement":null},{"id":"W2033667888","doi":"10.1038/modpathol.3880510","title":"Genital Tract Tumors in Proteus Syndrome: Report of a Case of Bilateral Paraovarian Endometrioid Cystic Tumors of Borderline Malignancy and Review of the Literature","year":2002,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Vascular Malformations and Hemangiomas","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child, Adolescent and Family Mental Health","funders":"","keywords":"Proteus syndrome; Medicine; Pathology; Malignancy; Hemihypertrophy; Dermatology","score_opus":0.02278726400440332,"score_gpt":0.29957824596495414,"score_spread":0.2767909819605508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033667888","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014940337,0.97954327,0.000753227,0.00065986876,0.00040740098,0.00002472564,0.00012470638,0.000057481706,0.0034889716],"genre_scores_gemma":[0.057911452,0.9367527,0.0014852055,0.00081556896,0.0009925355,0.000015196418,0.00021272629,0.000010023369,0.0018046668],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997619,0.000028582062,0.00006887177,0.000052305168,0.000056838806,0.000031506996],"domain_scores_gemma":[0.9994429,0.000268696,0.00014449874,0.000020097117,0.000064156404,0.000059724884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002088349,0.0010891805,0.0016377019,0.0038318518,0.00038285335,0.0010320143,0.0013082094,0.0015608773,0.0020294192],"category_scores_gemma":[0.000766042,0.00035806422,0.0004761365,0.003022488,0.0006401836,0.0015819744,0.0005545322,0.0007299366,0.0010187392],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014520026,0.000114510236,0.00910608,0.011386166,0.00027269902,0.549725,0.0005009478,0.0003808832,0.005732156,0.00045199972,0.0133386925,0.40884566],"study_design_scores_gemma":[0.00002478961,0.00011058063,0.013121128,0.0016859596,0.00044600433,0.8923134,0.00055804907,0.00014834838,0.001001502,0.00042575446,0.09010876,0.000055742916],"about_ca_topic_score_codex":0.0013256201,"about_ca_topic_score_gemma":0.0023797872,"teacher_disagreement_score":0.0038318518,"about_ca_system_score_codex":0.00035576662,"about_ca_system_score_gemma":0.00082390173,"threshold_uncertainty_score":0.0067890882},"labels":[],"label_agreement":null},{"id":"W2034079984","doi":"10.1038/modpathol.3880216","title":"Correlation of p53 Mutations in ThinPrep-Processed Fine Needle Breast Aspirates with Surgically Resected Breast Cancers","year":2000,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"Medical Research and Materiel Command","keywords":"Breast cancer; Pathology; Gene mutation; Gene; Exon; Cytology; Medicine; Biology; Mutation; Cancer; Internal medicine; Genetics","score_opus":0.008658955385650605,"score_gpt":0.23493692375373515,"score_spread":0.22627796836808456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034079984","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998623,0.0004945614,0.00017164795,0.000028168524,0.000012350029,0.000007461987,0.00011643105,0.000011583447,0.0005347234],"genre_scores_gemma":[0.99927384,0.00017762475,0.00019979994,0.000018006514,0.000015625203,0.000006950464,0.0001696806,0.0000029508499,0.00013560615],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994479,0.00008566422,0.00011690456,0.00009231275,0.00016379963,0.00009347621],"domain_scores_gemma":[0.9965605,0.0016623506,0.0008479621,0.00019456164,0.0004155084,0.0003190161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006707694,0.00029967693,0.00031690337,0.0021338675,0.00036016453,0.000796821,0.0004403936,0.00067845744,0.0018916639],"category_scores_gemma":[0.005236891,0.00036163814,0.00022595192,0.000772959,0.0005432382,0.0005206391,0.00041619642,0.0005081233,0.0005384727],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011373173,0.000049719834,0.9746192,0.000030717507,0.00004761515,0.002540834,0.00012804566,0.000079915546,0.018955525,0.000035987967,0.00009222167,0.002282862],"study_design_scores_gemma":[0.00001014068,0.00019929849,0.9795099,0.000008482817,0.00006039524,0.010391304,0.0003836062,0.00037113877,0.008667079,0.000055601784,0.00033607255,0.000007026026],"about_ca_topic_score_codex":0.00081050396,"about_ca_topic_score_gemma":0.0009933198,"teacher_disagreement_score":0.0021338675,"about_ca_system_score_codex":0.00023662782,"about_ca_system_score_gemma":0.00030138026,"threshold_uncertainty_score":0.0063282847},"labels":[],"label_agreement":null},{"id":"W2034398380","doi":"10.1038/modpathol.3800774","title":"Standardization of HER2 testing: results of an international proficiency-testing ring study","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Immunohistochemistry; Medicine; Breast cancer; Pathology; Fish <Actinopterygii>; Anatomical pathology; Cancer; Internal medicine; Oncology; Biology","score_opus":0.13295152696789742,"score_gpt":0.4354257715679868,"score_spread":0.30247424460008937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034398380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95914024,0.0013825552,0.022794016,0.00044590482,0.00018752241,0.0010300159,0.00087003206,0.00033396698,0.013815767],"genre_scores_gemma":[0.9887792,0.00018495174,0.008542685,0.00015056632,0.00003141061,0.00020639294,0.0008426539,0.00013524483,0.0011269549],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9543407,0.027690182,0.004391015,0.0054751183,0.0067325463,0.0013703405],"domain_scores_gemma":[0.90369797,0.036163945,0.005215443,0.025590919,0.02749368,0.001837989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.05272387,0.0011704374,0.0008899321,0.0021574444,0.0012220051,0.0014441643,0.0014360634,0.0009783803,0.0018485738],"category_scores_gemma":[0.06320847,0.00048917095,0.0012819305,0.0016460622,0.0019480971,0.0011916091,0.0022342158,0.0012192717,0.0010193659],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009904532,0.0026105582,0.67701757,0.0006934949,0.0014123389,0.00058512413,0.020610895,0.003859093,0.09710277,0.003566393,0.0050449534,0.17759223],"study_design_scores_gemma":[0.0006302551,0.010253517,0.80707836,0.00023740382,0.0016831337,0.0019872952,0.0041810335,0.006364229,0.14332713,0.0014247624,0.022614868,0.00021802004],"about_ca_topic_score_codex":0.0024904334,"about_ca_topic_score_gemma":0.0015184046,"teacher_disagreement_score":0.05272387,"about_ca_system_score_codex":0.0012122061,"about_ca_system_score_gemma":0.0013849015,"threshold_uncertainty_score":0.2788338},"labels":[],"label_agreement":null},{"id":"W2034857871","doi":"10.1038/modpathol.2008.60","title":"Reduction of GSTP1 expression by DNA methylation correlates with clinicopathological features in pituitary adenomas","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"GSTP1; DNA methylation; Methylation; Immunohistochemistry; Carcinogenesis; Biology; Cancer research; Molecular biology; Cancer; Enzyme; Gene expression; Glutathione; DNA; Immunology; Gene; Biochemistry; Genetics","score_opus":0.014175040949778383,"score_gpt":0.2545419665075306,"score_spread":0.2403669255577522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034857871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992093,0.00028646842,0.00017781512,0.000030119207,0.0000027024405,0.0000014291362,0.00007561353,0.000010726262,0.00020566751],"genre_scores_gemma":[0.99967587,0.000086389395,0.00006467867,0.000004200663,0.0000044374106,0.0000018808166,0.00007211217,0.0000020733462,0.000088379216],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998975,0.000020809968,0.000010429984,0.00002416532,0.000027667102,0.000019443658],"domain_scores_gemma":[0.9993259,0.0001837468,0.00028100063,0.000046190304,0.000056272413,0.0001069111],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019144446,0.00018337881,0.00025336113,0.0009135128,0.00023635566,0.00030993516,0.00020897514,0.00022330797,0.0010488748],"category_scores_gemma":[0.0008346739,0.0001992954,0.00012823139,0.00069879857,0.00037814712,0.00019423777,0.00016517502,0.0003563537,0.00016402146],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024807896,0.00003632029,0.7739305,0.000059720292,0.00008200585,0.0018558843,0.0002921213,0.00016943138,0.21168491,0.00010890804,0.00013895279,0.009160531],"study_design_scores_gemma":[0.000008318529,0.000109223954,0.9881407,0.0000016302763,0.000027315285,0.003102776,0.0001309523,0.0002101768,0.0079303775,0.000098694254,0.00023459486,0.000005098359],"about_ca_topic_score_codex":0.00094013015,"about_ca_topic_score_gemma":0.0007793731,"teacher_disagreement_score":0.0010488748,"about_ca_system_score_codex":0.0001901914,"about_ca_system_score_gemma":0.00016085335,"threshold_uncertainty_score":0.0035088062},"labels":[],"label_agreement":null},{"id":"W2036539825","doi":"10.1038/modpathol.3800713","title":"Stromal CD10 expression in invasive breast carcinoma correlates with poor prognosis, estrogen receptor negativity, and high grade","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":100,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; Memorial University of Newfoundland; BC Cancer Agency","funders":"Sanofi","keywords":"Tissue microarray; Stromal cell; Oncology; Breast cancer; Medicine; Lymph node; Immunohistochemistry; Internal medicine; Estrogen receptor; Breast carcinoma; Progesterone receptor; Pathology; Estrogen; Carcinoma; Cancer","score_opus":0.00886332264957506,"score_gpt":0.21780166320536312,"score_spread":0.20893834055578805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036539825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99890125,0.00038352972,0.000204952,0.000030408391,0.000004098244,0.0000019222541,0.00002749077,0.0000046494406,0.00044177836],"genre_scores_gemma":[0.99905294,0.00023183414,0.00024077066,0.0000106836915,0.0000071906347,0.0000022028883,0.00007152898,8.235424e-7,0.00038208955],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99993336,0.000016401294,0.0000066666817,0.000010449445,0.000016233033,0.000016871265],"domain_scores_gemma":[0.99979526,0.00005436351,0.00005090117,0.000013369317,0.00002891785,0.000057224373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020312578,0.00012854394,0.00012197763,0.0004450313,0.000114967464,0.00019602427,0.00010198146,0.00013206125,0.0009887372],"category_scores_gemma":[0.00031743644,0.00011925033,0.00006090102,0.00027663328,0.0001784783,0.00008738809,0.00010088163,0.00016398894,0.00014176765],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020364048,0.00011776509,0.7852565,0.000058783262,0.000042522577,0.0007080779,0.0000705566,0.0001099354,0.19402185,0.00009402474,0.00030502508,0.017178578],"study_design_scores_gemma":[0.000029686544,0.0003982722,0.96515775,0.000007232623,0.00005174271,0.005013003,0.00018643221,0.0009012105,0.026821679,0.000110576206,0.0013175625,0.000004757368],"about_ca_topic_score_codex":0.00058755756,"about_ca_topic_score_gemma":0.0013177709,"teacher_disagreement_score":0.0009887372,"about_ca_system_score_codex":0.00011732833,"about_ca_system_score_gemma":0.000105448074,"threshold_uncertainty_score":0.0033077002},"labels":[],"label_agreement":null},{"id":"W2036869633","doi":"10.1038/modpathol.3800642","title":"Scoring of p53, VEGF, Bcl-2 and APAF-1 immunohistochemistry and interobserver reliability in colorectal cancer","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Colorectal Cancer Treatments and Studies","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Colorectal cancer; Immunohistochemistry; Medicine; Pathology; VEGF receptors; Cancer; Oncology; Internal medicine","score_opus":0.01139833506825093,"score_gpt":0.2861370074246653,"score_spread":0.27473867235641436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036869633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.979387,0.002355098,0.014522544,0.000079587975,0.00012885171,0.00007645745,0.000091488815,0.00016743314,0.0031915673],"genre_scores_gemma":[0.9942478,0.00016161594,0.0050310777,0.000025471349,0.000038523693,0.000040510633,0.000089499736,0.000047225967,0.00031818592],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9700422,0.016739754,0.004863831,0.0027319288,0.0047831344,0.00083914684],"domain_scores_gemma":[0.8846833,0.07808784,0.0071585164,0.010747774,0.017947342,0.0013752294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.04908672,0.00055220857,0.00087846,0.0037849613,0.0010064312,0.0011312804,0.0010600539,0.0011435313,0.00089363294],"category_scores_gemma":[0.061695967,0.0008167661,0.0010702927,0.0015966773,0.001542222,0.0013823879,0.0014762698,0.00077601225,0.00038762778],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026981805,0.000080574806,0.94032675,0.0002989432,0.001393307,0.00030168088,0.0023657773,0.001766823,0.023223532,0.0004453788,0.00044061147,0.02665842],"study_design_scores_gemma":[0.000091812,0.00076185993,0.9404451,0.000091650334,0.0012011732,0.0026786493,0.001340658,0.029612461,0.020539347,0.0009940551,0.0021395918,0.000103550716],"about_ca_topic_score_codex":0.0015786979,"about_ca_topic_score_gemma":0.0031226864,"teacher_disagreement_score":0.04908672,"about_ca_system_score_codex":0.0007655643,"about_ca_system_score_gemma":0.0004150603,"threshold_uncertainty_score":0.2595985},"labels":[],"label_agreement":null},{"id":"W2037330590","doi":"10.1097/01.mp.0000062859.46942.93","title":"Colorectal Carcinoma: Diagnostic, Prognostic, and Molecular Features","year":2003,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":408,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Microsatellite instability; Medicine; Colorectal cancer; Perineural invasion; Pathological; Adjuvant therapy; Stage (stratigraphy); Oncology; Radiology; Cancer; Lymphovascular invasion; Pathology; Internal medicine; Metastasis; Microsatellite","score_opus":0.026108149195838717,"score_gpt":0.3131982515886114,"score_spread":0.2870901023927727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037330590","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001921992,0.9985763,0.00015956759,0.00021941424,0.00014702087,0.0000047222125,0.000019650792,0.000008265474,0.0006727837],"genre_scores_gemma":[0.0011346674,0.9977198,0.00028733627,0.00015701841,0.00027071475,0.0000037782786,0.000041410545,8.916478e-7,0.00038427333],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997658,0.000041634878,0.000043495787,0.000044660716,0.00008713194,0.000017245848],"domain_scores_gemma":[0.99932027,0.00029598965,0.00012489749,0.000022631753,0.00018917161,0.000047150366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070409494,0.0010394779,0.0018651205,0.0033377367,0.00024204953,0.000826625,0.001054004,0.00076144806,0.0019409925],"category_scores_gemma":[0.001086352,0.00030995085,0.00042395064,0.004005407,0.000631684,0.0013361172,0.0004973261,0.0011015482,0.0012499962],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008691427,0.000042815536,0.0010212811,0.011825696,0.00009780704,0.0005966168,0.000037874193,0.00035029257,0.0011761496,0.0006463079,0.02436118,0.959757],"study_design_scores_gemma":[0.000039995586,0.00014158357,0.008183225,0.006665095,0.0005782355,0.010933826,0.00018521977,0.00022907848,0.00071214046,0.0015376939,0.97074664,0.000047223944],"about_ca_topic_score_codex":0.0023073524,"about_ca_topic_score_gemma":0.0046103355,"teacher_disagreement_score":0.0033377367,"about_ca_system_score_codex":0.0007020219,"about_ca_system_score_gemma":0.0011993513,"threshold_uncertainty_score":0.0064932704},"labels":[],"label_agreement":null},{"id":"W2038264173","doi":"10.1038/modpathol.2014.116","title":"Cribriform growth is highly predictive for postoperative metastasis and disease-specific death in Gleason score 7 prostate cancer","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":297,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Cribriform; Prostatectomy; Medicine; Prostate cancer; Metastasis; Cancer; Prostate; Proportional hazards model; Oncology; Pathology; Urology; Internal medicine; Carcinoma","score_opus":0.044839724992891516,"score_gpt":0.31234161669476035,"score_spread":0.26750189170186883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038264173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941718,0.002339051,0.000494072,0.0002598003,0.00005565114,0.000016612279,0.0003549539,0.000036041547,0.002271891],"genre_scores_gemma":[0.9983726,0.00046190055,0.00025499077,0.000033138287,0.00005959962,0.000005128603,0.00031345378,0.000010960056,0.00048815343],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99965465,0.00008039063,0.000025262307,0.000049682818,0.00011575709,0.00007424885],"domain_scores_gemma":[0.99651164,0.00062395935,0.0016748719,0.00019795046,0.00038057973,0.00061102025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042764324,0.00044611777,0.00042707985,0.0016824355,0.00056658883,0.0009838162,0.0007191717,0.00060890935,0.0035069543],"category_scores_gemma":[0.0046255626,0.00036085618,0.00040108454,0.0017842667,0.0005092839,0.0005176419,0.0005324975,0.001152694,0.00053219154],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002321556,0.00001679955,0.9945346,0.000016617721,0.000029201165,0.00025190666,0.000027969587,0.00008202918,0.0011751264,0.000030465579,0.0001798914,0.00342327],"study_design_scores_gemma":[0.000005156348,0.00006416614,0.9971903,0.000009302757,0.00003928653,0.0011286677,0.00014218524,0.00058495655,0.0003405435,0.00009736546,0.00039037288,0.000007661352],"about_ca_topic_score_codex":0.009301076,"about_ca_topic_score_gemma":0.009306899,"teacher_disagreement_score":0.009301076,"about_ca_system_score_codex":0.0004393757,"about_ca_system_score_gemma":0.00056639535,"threshold_uncertainty_score":0.018493831},"labels":[],"label_agreement":null},{"id":"W2038876912","doi":"10.1038/modpathol.2014.154","title":"Molecular and clinical support for a four-tiered grading system for bladder cancer based on the WHO 1973 and 2004 classifications","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; University of Toronto; University Health Network; Princess Margaret Cancer Centre","funders":"University of Toronto; KWF Kankerbestrijding; Ministerio de Economía y Competitividad; University Health Network","keywords":"Grading (engineering); Bladder cancer; Medicine; Pathology; Internal medicine; Oncology; Tumor grade; Immunohistochemistry; Cancer; Biology","score_opus":0.06104371313168939,"score_gpt":0.34162799383051523,"score_spread":0.28058428069882585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038876912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5508773,0.038150214,0.20360094,0.057898596,0.008360039,0.0017702742,0.019279908,0.0015316064,0.1185311],"genre_scores_gemma":[0.8306447,0.0052441633,0.14107317,0.0023371864,0.0010033069,0.00047312526,0.013070124,0.0002159014,0.0059383987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971233,0.0010689558,0.00039485758,0.0003578342,0.00075676123,0.00029837494],"domain_scores_gemma":[0.98704857,0.0023531287,0.0015481148,0.0010595116,0.0074047833,0.0005859096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009620745,0.000635003,0.0006141868,0.0041696625,0.0009375803,0.002346788,0.0021773558,0.0008152385,0.0041469643],"category_scores_gemma":[0.019996194,0.00023594878,0.0012148821,0.002713216,0.0008485459,0.0017590399,0.0013221904,0.0018081167,0.001953642],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093269587,0.00019807222,0.56130075,0.0008317362,0.0004727554,0.00045314868,0.00083260355,0.0033464192,0.010646547,0.021822255,0.053463858,0.3456992],"study_design_scores_gemma":[0.00029314662,0.0013121342,0.68658996,0.0017300461,0.0020721348,0.0049266615,0.0030369305,0.03150071,0.010181299,0.046522055,0.21156193,0.00027299448],"about_ca_topic_score_codex":0.009356938,"about_ca_topic_score_gemma":0.01226515,"teacher_disagreement_score":0.009620745,"about_ca_system_score_codex":0.0022205315,"about_ca_system_score_gemma":0.004101343,"threshold_uncertainty_score":0.050879955},"labels":[],"label_agreement":null},{"id":"W2040184473","doi":"10.1038/modpathol.3800262","title":"ImmunoCyt/uCyt+™ improves the sensitivity of urine cytology in patients followed for urothelial carcinoma","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec","funders":"","keywords":"Cytology; Cystoscopy; Medicine; Urine cytology; Malignancy; Bladder cancer; Urology; Urine; Carcinoma; Urinary system; Pathology; Urothelial carcinoma; Cancer; Internal medicine","score_opus":0.013702840373091751,"score_gpt":0.26085405272069184,"score_spread":0.2471512123476001,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040184473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99295205,0.005598166,0.00011917672,0.00028273513,0.00009813424,0.000011714073,0.000091492984,0.00004857122,0.00079795095],"genre_scores_gemma":[0.9983746,0.00078931113,0.00017862921,0.00012983658,0.00006244397,0.0000037372668,0.00010678722,0.0000030855617,0.0003515451],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979645,0.000066183966,0.000020085467,0.00004019881,0.00004643086,0.000030573596],"domain_scores_gemma":[0.9993992,0.00024367301,0.00010666118,0.000042207503,0.00008864187,0.00011961057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044782975,0.00027274946,0.0008143682,0.00023534577,0.00023602552,0.00037089328,0.00020576731,0.0004749935,0.0012398165],"category_scores_gemma":[0.0016780603,0.00015962248,0.000377372,0.00029799028,0.00016278235,0.00028231062,0.0001754621,0.0006061265,0.00020027986],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03254744,0.002033057,0.7170233,0.00033398985,0.0006885868,0.0005231433,0.0001961778,0.00067779556,0.0235631,0.0000560391,0.0026623907,0.21969496],"study_design_scores_gemma":[0.00054765714,0.010423746,0.9766142,0.000044201042,0.000876944,0.0010227831,0.00013057726,0.0011090401,0.0071176393,0.00008048736,0.0020152146,0.000017457434],"about_ca_topic_score_codex":0.0013840978,"about_ca_topic_score_gemma":0.002653582,"teacher_disagreement_score":0.0013840978,"about_ca_system_score_codex":0.00021162027,"about_ca_system_score_gemma":0.00026571497,"threshold_uncertainty_score":0.004147589},"labels":[],"label_agreement":null},{"id":"W2041626845","doi":"10.1097/01.mp.0000062995.72390.14","title":"Gastritis and Carditis","year":2003,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":119,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Gastritis; Atrophic gastritis; Gastroenterology; Helicobacter pylori; Biopsy; Internal medicine; Intestinal metaplasia; pernicious anemia; Pathology; Disease; Anemia","score_opus":0.044615878129824066,"score_gpt":0.3144135689449956,"score_spread":0.2697976908151716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041626845","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000082505205,0.99924386,0.000026509966,0.000083364626,0.00020152499,0.0000033881015,0.000007954999,0.0000026673497,0.00034835347],"genre_scores_gemma":[0.000607664,0.9983278,0.00007741275,0.00016059427,0.0004172265,0.000004502938,0.000018569384,6.8475987e-7,0.0003855082],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99962056,0.00007618575,0.00009828789,0.00005849001,0.00011628235,0.000030187546],"domain_scores_gemma":[0.9994037,0.00023132951,0.00018264398,0.000022090368,0.00011183143,0.000048377242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007095038,0.001476123,0.0031652823,0.0061652074,0.0002929821,0.0013227874,0.0009484383,0.0011953345,0.004827618],"category_scores_gemma":[0.0013690509,0.0004371625,0.00054079556,0.0064025465,0.0009134223,0.002158611,0.0011564399,0.0011988162,0.0018854807],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015880587,0.00006444897,0.00087392016,0.057463687,0.00019120255,0.0007662144,0.00012195894,0.00017432682,0.001181062,0.00092320563,0.031948272,0.9061328],"study_design_scores_gemma":[0.000111969835,0.00027192524,0.0067790328,0.025811546,0.0008805896,0.008038984,0.00035381247,0.000100175654,0.00035621593,0.0012594745,0.95599514,0.00004113903],"about_ca_topic_score_codex":0.001352921,"about_ca_topic_score_gemma":0.0035967678,"teacher_disagreement_score":0.0061652074,"about_ca_system_score_codex":0.00058745086,"about_ca_system_score_gemma":0.0013778906,"threshold_uncertainty_score":0.016149998},"labels":[],"label_agreement":null},{"id":"W2041726635","doi":"10.1038/modpathol.3880150","title":"Intrarenal Schwannoma: A Report of Four Cases Including Three Cellular Variants","year":2000,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neurofibromatosis and Schwannoma Cases","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Credit Valley Hospital","funders":"","keywords":"Pathology; Medicine; CD34; Kidney; Cytokeratin; Nuclear atypia; Renal cell carcinoma; Schwannoma; Differential diagnosis; Desmin; Renal pelvis; Asymptomatic; Solitary fibrous tumor; Immunohistochemistry; Leiomyosarcoma; Nephrectomy; Clear cell; Biology; Vimentin; Internal medicine","score_opus":0.054280276465792476,"score_gpt":0.2799228078180313,"score_spread":0.22564253135223883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041726635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99212474,0.0013435638,0.0023557139,0.00012333831,0.00008008422,0.0000683153,0.00010874877,0.00013212825,0.003663337],"genre_scores_gemma":[0.9970489,0.00041211204,0.0013274067,0.00007052739,0.00017386599,0.000047260077,0.00008839177,0.000037885948,0.0007935668],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.998273,0.00014072614,0.00031306763,0.00044286533,0.00024667324,0.00058359856],"domain_scores_gemma":[0.99557424,0.0013566853,0.0009749442,0.0009428261,0.00020934414,0.0009418744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007003299,0.003694766,0.0014138866,0.0035111767,0.0035846839,0.0024150617,0.0040584607,0.0036942062,0.003345714],"category_scores_gemma":[0.006024173,0.0018547882,0.0014752622,0.0030874559,0.0052794777,0.0020897395,0.0039183637,0.0019442267,0.0018419587],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001855853,0.00009502591,0.02704391,0.00007773969,0.00004460155,0.96416026,0.0010532372,0.00014849896,0.004159737,0.00025411104,0.00011052516,0.0026667484],"study_design_scores_gemma":[0.00002104476,0.000117516465,0.011781344,0.000008109076,0.000051598992,0.9847697,0.00047559277,0.00010559998,0.001783677,0.00013923227,0.00071744976,0.000029208422],"about_ca_topic_score_codex":0.0013977268,"about_ca_topic_score_gemma":0.0014049286,"teacher_disagreement_score":0.0040584607,"about_ca_system_score_codex":0.0008983287,"about_ca_system_score_gemma":0.0007147926,"threshold_uncertainty_score":0.01119256},"labels":[],"label_agreement":null},{"id":"W2042227848","doi":"10.1038/modpathol.2011.211","title":"BRCA1 and BRCA2 mutations correlate with TP53 abnormalities and presence of immune cell infiltrates in ovarian high-grade serous carcinoma","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":186,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of Calgary; University of British Columbia","funders":"","keywords":"Serous fluid; Germline mutation; Ovarian carcinoma; BRCA2 Protein; Medicine; Germline; Somatic cell; Serous carcinoma; Pathology; Ovarian cancer; Methylation; Cancer research; Biology; Internal medicine; Mutation; Cancer; Gene; Genetics","score_opus":0.012253407425656697,"score_gpt":0.23060295134803702,"score_spread":0.21834954392238032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042227848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991579,0.00030884217,0.000055287346,0.000020878071,0.000004366148,0.0000026585622,0.000026752301,0.000004470161,0.0004188397],"genre_scores_gemma":[0.9997583,0.00008195999,0.000042436463,0.0000068241943,0.000014695009,0.0000018605458,0.00003238906,0.000001327974,0.00006018779],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996804,0.00008463003,0.000052737803,0.000043684664,0.0000740856,0.00006444002],"domain_scores_gemma":[0.996942,0.0010314905,0.0011915872,0.00018816176,0.00024642327,0.0004004631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005585731,0.00025238542,0.0002841669,0.001866011,0.0003675305,0.0007197603,0.00034834893,0.0005281203,0.0021452592],"category_scores_gemma":[0.0039129574,0.0003326252,0.00023271944,0.001044281,0.0005281402,0.00062229217,0.000363766,0.00040138632,0.0002515549],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023837225,0.00002782643,0.99543166,0.000009622804,0.00001915237,0.0009671222,0.000052079715,0.000041309308,0.0020594234,0.000018994991,0.000029928719,0.0011044939],"study_design_scores_gemma":[0.0000047485796,0.000056924757,0.99525416,0.0000028318204,0.000022146798,0.0038490873,0.00014756333,0.00017168408,0.00036459355,0.00003587188,0.00008788775,0.0000023929538],"about_ca_topic_score_codex":0.0005794532,"about_ca_topic_score_gemma":0.00065995293,"teacher_disagreement_score":0.0021452592,"about_ca_system_score_codex":0.00015700854,"about_ca_system_score_gemma":0.00018221486,"threshold_uncertainty_score":0.0071766376},"labels":[],"label_agreement":null},{"id":"W2042896900","doi":"10.1038/modpathol.3800527","title":"Cell reservoirs in lymph nodes infected with HIV-1 subtype E differ from subtype B: identification by combined in situ polymerase chain reaction and immunohistochemistry","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Centers for Disease Control and Prevention; National Institutes of Health; National Center for Genetic Engineering and Biotechnology","keywords":"Lymph; Germinal center; Biology; Histiocyte; Lymph node; Pathology; Immunohistochemistry; Follicular dendritic cells; Immunophenotyping; Langerhans cell; Reverse transcriptase; Dendritic cell; Virology; Polymerase chain reaction; B cell; Immunology; T cell; Flow cytometry; Medicine; Antigen-presenting cell; Antigen; Antibody; Immune system","score_opus":0.006462962093162041,"score_gpt":0.22512662983206427,"score_spread":0.21866366773890222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042896900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939948,0.001130445,0.0027803683,0.000024094526,0.000017646063,0.000046895384,0.0001891689,0.00003132095,0.0017852787],"genre_scores_gemma":[0.9914016,0.00084874826,0.005381153,0.00003970572,0.000022349235,0.000086258406,0.00032181936,0.00001986967,0.0018783706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981576,0.000030137,0.000018547114,0.00004512009,0.00002675978,0.000063607804],"domain_scores_gemma":[0.9998099,0.000081008526,0.000024627378,0.000028624328,0.000035919868,0.000019875315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002922609,0.00022895854,0.00022150126,0.0004927499,0.00031902865,0.0005076211,0.00024036084,0.00038920384,0.0011608807],"category_scores_gemma":[0.00023423029,0.0003106964,0.00016943741,0.00024131309,0.00024488522,0.0005715532,0.00021703167,0.00037313876,0.00034880373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004819951,0.00003770046,0.0074864184,0.000060792005,0.0000111737345,0.00018575692,0.00015378275,0.000037763286,0.9879996,0.00016704442,0.00002767399,0.0033502574],"study_design_scores_gemma":[0.0001264948,0.0010865879,0.19339101,0.00005011377,0.00016997402,0.0034095682,0.0019686546,0.0029326351,0.7904528,0.0006807882,0.005706931,0.000024501025],"about_ca_topic_score_codex":0.0005103097,"about_ca_topic_score_gemma":0.0007185863,"teacher_disagreement_score":0.0011608807,"about_ca_system_score_codex":0.00012008344,"about_ca_system_score_gemma":0.00012534864,"threshold_uncertainty_score":0.0038835406},"labels":[],"label_agreement":null},{"id":"W2043104308","doi":"10.1038/modpathol.3880214","title":"Small Lymphocytic Lymphoma with Perifollicular, Marginal Zone, or Interfollicular Distribution","year":2000,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Pathology; Hematopathology; Marginal zone; Medicine; Lymphoma; Biology; Immunology; B cell","score_opus":0.017722231804236106,"score_gpt":0.2323764019740509,"score_spread":0.2146541701698148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043104308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93449193,0.011367347,0.012357346,0.00050769927,0.00009988451,0.00011732223,0.00020045368,0.00029490193,0.040563025],"genre_scores_gemma":[0.9969548,0.00072984473,0.00074414065,0.00009023129,0.000109511166,0.000010140648,0.000039150767,0.00001089139,0.0013113252],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982554,0.000032258955,0.000019387378,0.00002886673,0.000040187635,0.00005376623],"domain_scores_gemma":[0.99951875,0.00019324152,0.00011857809,0.00007709551,0.000032829677,0.000059508013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035298217,0.0004929124,0.00026399436,0.00086046435,0.00034633712,0.00053460954,0.0003405959,0.00040363654,0.004182812],"category_scores_gemma":[0.0012600865,0.00011077278,0.00019187736,0.0005542873,0.00069867534,0.000646669,0.00039122155,0.0003205161,0.000989634],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040735607,0.00034211148,0.37942022,0.0008647611,0.000162715,0.27941993,0.0006028462,0.0004260506,0.11454263,0.00672929,0.0022800213,0.21113594],"study_design_scores_gemma":[0.00027377703,0.0010982687,0.11775785,0.0000896943,0.00021404552,0.83140916,0.0005156296,0.0015169933,0.029839877,0.0053677857,0.011889151,0.000027847065],"about_ca_topic_score_codex":0.0003042934,"about_ca_topic_score_gemma":0.00045737368,"teacher_disagreement_score":0.004182812,"about_ca_system_score_codex":0.00023572527,"about_ca_system_score_gemma":0.00019698526,"threshold_uncertainty_score":0.013992906},"labels":[],"label_agreement":null},{"id":"W2044276812","doi":"10.1038/modpathol.3800976","title":"Diagnostic and prognostic markers for gastrointestinal stromal tumors in Norway","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gastrointestinal Tumor Research and Treatment","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Michael Smith Health Research BC; Sanofi","keywords":"CD117; GiST; Immunohistochemistry; Tissue microarray; Pathology; Gastrointestinal tract; Histology; Stromal cell; Atypia; Stromal tumor; CD34; Medicine; Nuclear atypia; Hematopathology; Biology; Internal medicine; Cytogenetics","score_opus":0.01914010179571415,"score_gpt":0.2965431715838318,"score_spread":0.2774030697881177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044276812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913236,0.0031712714,0.0005741387,0.00049221196,0.00013305893,0.00001599785,0.001732819,0.00001145041,0.0025453889],"genre_scores_gemma":[0.9970055,0.0008788759,0.0005009026,0.00005759388,0.000028044746,0.000018588917,0.00091050443,0.0000055358787,0.000594477],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99950016,0.00014464435,0.00008368643,0.00006627836,0.000074703545,0.0001306116],"domain_scores_gemma":[0.9990945,0.00024946636,0.0002671864,0.000040033137,0.00018861535,0.00016021488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012159854,0.00019351185,0.00027205082,0.00079465465,0.00040331215,0.0006106313,0.00028217823,0.00017969102,0.0007359525],"category_scores_gemma":[0.0022023513,0.00019714855,0.00018753976,0.0009176758,0.00043206377,0.00027632224,0.000528366,0.00024621782,0.00014834809],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057912274,0.00004341106,0.9845882,0.00005013446,0.00002724326,0.00042658468,0.00054077146,0.00044351423,0.0014419776,0.00036060065,0.0011246022,0.010373717],"study_design_scores_gemma":[0.000029057166,0.00017912079,0.99027705,0.00006246516,0.00004897436,0.0007544396,0.0013639668,0.00047374985,0.0007487423,0.00025175474,0.0057957647,0.000014908002],"about_ca_topic_score_codex":0.046872485,"about_ca_topic_score_gemma":0.040855456,"teacher_disagreement_score":0.046872485,"about_ca_system_score_codex":0.00107162,"about_ca_system_score_gemma":0.0018766926,"threshold_uncertainty_score":0.09319931},"labels":[],"label_agreement":null},{"id":"W2044481915","doi":"10.1038/modpathol.3800496","title":"Interobserver agreement and reproducibility in classification of invasive breast carcinoma: an NCI breast cancer family registry study","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Reliability and Agreement in Measurement","field":"Decision Sciences","cited_by":116,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto; Jewish General Hospital; Statistics Canada","funders":"National Cancer Institute; National Institutes of Health; National Institute of Informatics","keywords":"Medicine; Reproducibility; Breast cancer; Pathology; Breast carcinoma; Cancer registry; Cancer; Oncology; Radiology; Internal medicine; Epidemiology","score_opus":0.18480263545995282,"score_gpt":0.37383187807648444,"score_spread":0.18902924261653162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044481915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99756336,0.0002084222,0.001180308,0.000024444167,0.000015739413,0.0000415732,0.00016552827,0.000016554775,0.0007840921],"genre_scores_gemma":[0.9990483,0.000034915243,0.0006162337,0.000011660405,0.000009251821,0.000034550554,0.00016403077,0.000009422761,0.00007152803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9618706,0.023943609,0.0035274085,0.0030788176,0.0066064745,0.0009731456],"domain_scores_gemma":[0.90883946,0.05273433,0.009896713,0.013740672,0.013781927,0.0010069705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.033752963,0.000408019,0.00081323995,0.0022340051,0.0011130632,0.0010675972,0.001532056,0.00095783314,0.00040547329],"category_scores_gemma":[0.08315826,0.00061029504,0.0009523365,0.0014927442,0.0012532173,0.0014495538,0.0015636896,0.00068658224,0.0002700154],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002803385,0.00005571851,0.99541605,0.000015857224,0.00018331823,0.000056932335,0.00095399475,0.00017214274,0.00025106073,0.000043099884,0.0001103156,0.002461069],"study_design_scores_gemma":[0.00002486232,0.00016402233,0.9962748,0.000009274984,0.0001941556,0.0003033985,0.00067040394,0.0015728868,0.00046330408,0.000064658474,0.00024173726,0.000016579655],"about_ca_topic_score_codex":0.010563574,"about_ca_topic_score_gemma":0.0114617115,"teacher_disagreement_score":0.033752963,"about_ca_system_score_codex":0.0012941967,"about_ca_system_score_gemma":0.0009842607,"threshold_uncertainty_score":0.17850488},"labels":[],"label_agreement":null},{"id":"W2045627023","doi":"10.1038/modpathol.2014.32","title":"Visual and automated assessment of matrix metalloproteinase-14 tissue expression for the evaluation of ovarian cancer prognosis","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital du Saint-Sacrement; Centre hospitalier universitaire de Québec; Université Laval","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Terry Fox Foundation; Cancer Research Society","keywords":"Medicine; Hazard ratio; Confidence interval; Tissue microarray; Oncology; Pathology; Internal medicine; Ovarian carcinoma; Cancer; Ovarian cancer","score_opus":0.022754854956166613,"score_gpt":0.3650127614810607,"score_spread":0.3422579065248941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045627023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70800227,0.0062603126,0.26935875,0.0006849688,0.0001737333,0.00055873726,0.002641549,0.003916565,0.008403173],"genre_scores_gemma":[0.8851851,0.0011299774,0.10811729,0.00013332424,0.00007214231,0.00020037334,0.00072424085,0.0001544809,0.0042830515],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994054,0.0001848147,0.000046296256,0.00009085813,0.0001967014,0.000075945296],"domain_scores_gemma":[0.99893314,0.0003706866,0.000105250365,0.00011344509,0.00039063694,0.00008683955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015957413,0.00032720226,0.00038436794,0.0033468779,0.00018279295,0.00074635213,0.00045819103,0.00053152844,0.0033329953],"category_scores_gemma":[0.002018691,0.00031076957,0.00023833688,0.0007500816,0.00025001317,0.0004628534,0.0006037318,0.00035013235,0.000753918],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003996532,0.00020774893,0.10733173,0.00080237206,0.0002313762,0.00057689985,0.00038456506,0.002732873,0.47601923,0.0015253946,0.0049170186,0.40127426],"study_design_scores_gemma":[0.00025636185,0.00080543803,0.526495,0.00021418405,0.00036390248,0.009043576,0.0005934461,0.17563055,0.26726785,0.0039530694,0.015148069,0.00022868019],"about_ca_topic_score_codex":0.0014675622,"about_ca_topic_score_gemma":0.0021861515,"teacher_disagreement_score":0.0033468779,"about_ca_system_score_codex":0.00029240892,"about_ca_system_score_gemma":0.00032292042,"threshold_uncertainty_score":0.0111500025},"labels":[],"label_agreement":null},{"id":"W2045715105","doi":"10.1038/modpathol.2009.48","title":"Expression of insulin-like growth factor 2 in mesenchymal neoplasms","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; University of British Columbia","funders":"Michael Smith Health Research BC; National Cancer Institute; Sanofi","keywords":"Mesenchymal stem cell; Pathology; Synovial sarcoma; Sarcoma; Growth factor; Stromal cell; Immunohistochemistry; PDGFRA; Cancer research; Giant Cell Tumors; Medicine; Tissue microarray; Gene expression profiling; Immunostaining; Biology; GiST; Gene expression; Giant cell; Internal medicine; Receptor; Gene","score_opus":0.02175985133195982,"score_gpt":0.27628975588293914,"score_spread":0.2545299045509793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045715105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924119,0.0024708358,0.0010526611,0.000062912826,0.000026994807,0.000008502965,0.00008208064,0.000024899535,0.003859255],"genre_scores_gemma":[0.99707735,0.0007287295,0.0008175459,0.000019875659,0.000021856224,0.0000069560842,0.00012554774,0.0000037248901,0.0011984402],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998864,0.000019961786,0.000014031135,0.000016616747,0.00003745124,0.000025518175],"domain_scores_gemma":[0.99987304,0.000034565954,0.000022208262,0.000011599142,0.00003023165,0.000028327298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021552714,0.0001282879,0.00011430393,0.0007814766,0.00017615376,0.00041005464,0.0001141003,0.00019513811,0.00081805553],"category_scores_gemma":[0.0003271711,0.00014016034,0.00011289648,0.0004056285,0.000261432,0.00027223272,0.0001933383,0.00022529774,0.00019025816],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009944165,0.0000565645,0.034288358,0.0000878032,0.00003526141,0.0021792299,0.00021897808,0.00016403891,0.94768393,0.0009276241,0.00018473633,0.01317905],"study_design_scores_gemma":[0.00011305111,0.0011319693,0.37960452,0.000041979893,0.00020512241,0.01982665,0.0016842597,0.0039411457,0.57185954,0.0014475407,0.020104008,0.000040219034],"about_ca_topic_score_codex":0.00048377225,"about_ca_topic_score_gemma":0.0003719032,"teacher_disagreement_score":0.00081805553,"about_ca_system_score_codex":0.00021911695,"about_ca_system_score_gemma":0.00013862754,"threshold_uncertainty_score":0.002736628},"labels":[],"label_agreement":null},{"id":"W2045892606","doi":"10.1097/01.mp.0000027203.44333.95","title":"Lymphadenopathy Due to Penicillium Marneffei Infection: Diagnosis by Fine Needle Aspiration Cytology","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Penicillium marneffei; Fine-needle aspiration; Medicine; Biopsy; Pathology; Lymphoma; Cytology; Opportunistic infection; Human immunodeficiency virus (HIV); Immunology; Viral disease; Coinfection","score_opus":0.026871626231255805,"score_gpt":0.2577284358423836,"score_spread":0.23085680961112778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045892606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98825675,0.0044627534,0.0026210176,0.00029574687,0.000058719015,0.000080109035,0.000053860684,0.0000652608,0.0041058348],"genre_scores_gemma":[0.99819034,0.000797808,0.00068091985,0.000067606394,0.000054270655,0.0000088245815,0.000022584487,0.000003952944,0.0001736772],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99981266,0.00004767308,0.000028240029,0.000029945526,0.000029916011,0.0000516386],"domain_scores_gemma":[0.99936074,0.0003305975,0.00007988741,0.00006602762,0.000051285526,0.000111462374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044367075,0.00061367627,0.00030210492,0.0008409362,0.00046358976,0.0003925341,0.0002851137,0.00079386146,0.0013348451],"category_scores_gemma":[0.0033778497,0.0003358062,0.00013301022,0.00026898732,0.00077554805,0.00052699575,0.00046577613,0.00057467987,0.0005247739],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006642675,0.00020075792,0.40602478,0.00022614568,0.000034638615,0.5150775,0.0010245632,0.00054396247,0.03488351,0.0002867815,0.0011604929,0.03987267],"study_design_scores_gemma":[0.000110023764,0.0005854935,0.120146565,0.00009479226,0.00004199503,0.8674075,0.00050524663,0.0011314122,0.006554094,0.00032394644,0.0030651318,0.000033791228],"about_ca_topic_score_codex":0.0010910658,"about_ca_topic_score_gemma":0.000831848,"teacher_disagreement_score":0.0013348451,"about_ca_system_score_codex":0.00021632221,"about_ca_system_score_gemma":0.00019185708,"threshold_uncertainty_score":0.0044655204},"labels":[],"label_agreement":null},{"id":"W2046404577","doi":"10.1038/modpathol.2014.89","title":"Loss of ALDH1A1 expression is an early event in the pathogenesis of ovarian high-grade serous carcinoma","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute","keywords":"Serous fluid; Pathology; Serous carcinoma; Biology; Stem cell; Fallopian tube; Epithelium; Ovarian carcinoma; Serous Cystadenoma; Cancer stem cell; Ovarian cancer; Medicine; Cancer; Anatomy; Cell biology","score_opus":0.024291129687060355,"score_gpt":0.26901281489782114,"score_spread":0.2447216852107608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046404577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955804,0.0022201128,0.001047684,0.00007426347,0.000014439834,0.00001583335,0.00009654096,0.00004300656,0.00090766646],"genre_scores_gemma":[0.99901366,0.00039311114,0.00017358108,0.000009594247,0.000009647279,0.000003842454,0.00006831899,0.0000020745908,0.0003261789],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99989784,0.00001972994,0.000007962695,0.000011688197,0.000033499018,0.000029277635],"domain_scores_gemma":[0.99972695,0.000050917788,0.00010674318,0.000024763385,0.000030155596,0.000060436858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024086371,0.00018315864,0.00023238841,0.0007879764,0.00024973036,0.0005796128,0.00017100855,0.00023842437,0.0010582508],"category_scores_gemma":[0.0003643048,0.0001880133,0.00013222871,0.00042280584,0.00041036392,0.00034538572,0.00025545052,0.00043531798,0.00023166566],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026388615,0.00014946974,0.3264269,0.00019474069,0.000050950974,0.005659705,0.00034042346,0.00036095091,0.6446929,0.00088453945,0.00048544764,0.018115109],"study_design_scores_gemma":[0.00002600913,0.00036348484,0.85203767,0.000011813962,0.000062239444,0.007962236,0.00038334008,0.0011798482,0.13376243,0.0004756183,0.0037190067,0.000016320007],"about_ca_topic_score_codex":0.00043775945,"about_ca_topic_score_gemma":0.00029557222,"teacher_disagreement_score":0.0010582508,"about_ca_system_score_codex":0.00020680328,"about_ca_system_score_gemma":0.00018294743,"threshold_uncertainty_score":0.0035402179},"labels":[],"label_agreement":null},{"id":"W2047034979","doi":"10.1097/01.mp.0000038462.62634.b1","title":"The Role of HER2/neu Overexpression/Amplification in the Progression of Ductal Carcinoma In Situ to Invasive Carcinoma of the Breast","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":155,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"Ductal carcinoma; Pathology; Invasive ductal carcinoma; In situ; HER2/neu; Carcinoma in situ; Medicine; Breast carcinoma; Immunohistochemistry; Carcinoma; Biology; Breast cancer; Internal medicine; Cancer; Chemistry","score_opus":0.03184448073635069,"score_gpt":0.3110719908158152,"score_spread":0.2792275100794645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047034979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979715,0.001185378,0.00014971312,0.000021321597,0.0000033927572,0.000009176368,0.00003085756,0.000005702939,0.00062292686],"genre_scores_gemma":[0.9987276,0.00073831936,0.00021121655,0.000012836363,0.00001918945,0.000008528099,0.00008145586,0.0000022668614,0.00019863316],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994867,0.00020528462,0.00005063074,0.000050955292,0.00012619761,0.00008023628],"domain_scores_gemma":[0.9983215,0.0007156252,0.00052576966,0.00008035917,0.00020143423,0.00015531259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011905291,0.00024326392,0.00017857533,0.0012050442,0.00028105674,0.0006169043,0.0002922818,0.0002561947,0.0008361541],"category_scores_gemma":[0.0028945534,0.0003054124,0.00013195488,0.000620527,0.00049913855,0.00041174737,0.00027254486,0.00023088416,0.00023369332],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004909579,0.00008249404,0.97043467,0.00007371004,0.00002968664,0.0019802726,0.00029280753,0.00019655358,0.010792827,0.000063457795,0.00014907101,0.015413425],"study_design_scores_gemma":[0.00001283078,0.00017347641,0.98918205,0.000016197211,0.000030278532,0.0071285446,0.00027476618,0.0004706915,0.0021203745,0.000095704876,0.000484799,0.000010294582],"about_ca_topic_score_codex":0.0013731675,"about_ca_topic_score_gemma":0.001745477,"teacher_disagreement_score":0.0013731675,"about_ca_system_score_codex":0.00029353146,"about_ca_system_score_gemma":0.0002463202,"threshold_uncertainty_score":0.0062962174},"labels":[],"label_agreement":null},{"id":"W2047788281","doi":"10.1038/modpathol.3800703","title":"Foreign material identification","year":2006,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Identification (biology); Pathology; Medicine; Biology; Botany","score_opus":0.012615867531178597,"score_gpt":0.25503678938766927,"score_spread":0.24242092185649067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047788281","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0077294665,0.006733751,0.005062557,0.76012814,0.06743573,0.000074491836,0.00015754499,0.00022666043,0.15245174],"genre_scores_gemma":[0.07385865,0.0032317752,0.0044185477,0.5973001,0.030675963,0.000057837336,0.00019576326,0.000096191914,0.29016513],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99908614,0.00020840023,0.000088284294,0.0001796034,0.0002593182,0.00017828509],"domain_scores_gemma":[0.9985844,0.000623031,0.00008837833,0.00017321501,0.00032708142,0.00020392556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010017534,0.00035265708,0.00045440407,0.000570853,0.002544287,0.0017401569,0.0010720372,0.020747095,0.009929816],"category_scores_gemma":[0.0060028587,0.00028089358,0.0006339291,0.00026003394,0.0010518313,0.0016121338,0.00093948864,0.013993938,0.005270966],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085963235,0.00004730858,0.0014588475,0.00008355228,0.00002071787,0.025441092,0.00027050293,0.00008541914,0.000983791,0.016981583,0.9060093,0.04853188],"study_design_scores_gemma":[0.000020331208,0.00004943729,0.0009976499,0.0001589479,0.000020726038,0.03456244,0.00021140439,0.00027668738,0.0011289787,0.011447781,0.95110583,0.00001973203],"about_ca_topic_score_codex":0.0015718259,"about_ca_topic_score_gemma":0.004896931,"teacher_disagreement_score":0.020747095,"about_ca_system_score_codex":0.001439574,"about_ca_system_score_gemma":0.0015538639,"threshold_uncertainty_score":0.033218503},"labels":[],"label_agreement":null},{"id":"W2048410155","doi":"10.1038/modpathol.3880434","title":"Inflammatory Pseudotumor and Sarcoma of Urinary Bladder: Differential Diagnosis and Outcome in Thirty-Eight Spindle Cell Neoplasms","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Urinary and Genital Oncology Studies","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Medicine; Pathology; Differential diagnosis; Inflammatory pseudotumor; Urinary bladder; Spindle cell sarcoma; Sarcoma; Urinary system; Urology; Anatomy; Lesion","score_opus":0.02120465894831083,"score_gpt":0.2681896858059649,"score_spread":0.24698502685765408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048410155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995165,0.00016691277,0.000067636516,0.0000101959695,0.000004013127,0.000014736989,0.0000438153,0.0000027255282,0.0001734698],"genre_scores_gemma":[0.9994437,0.00018945172,0.00011050368,0.000010418324,0.000008076026,0.000013907688,0.00009066323,0.0000014834667,0.0001317857],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995378,0.0000485219,0.000093376,0.00006377621,0.00010338256,0.0001530764],"domain_scores_gemma":[0.9984761,0.00043366355,0.00042861264,0.000115418785,0.0001217058,0.00042443137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051123573,0.0005334721,0.0004788408,0.0017079763,0.001128114,0.0006128542,0.0004914937,0.00044147932,0.0011640765],"category_scores_gemma":[0.002729984,0.0005201049,0.00043103407,0.0009573414,0.0012553595,0.0005635585,0.0015264184,0.00028678792,0.0003901677],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070009346,0.00021230789,0.95103955,0.000073781004,0.000029563145,0.03525788,0.0022550314,0.00028693906,0.0035844664,0.00011592247,0.00011833009,0.006326175],"study_design_scores_gemma":[0.000062318504,0.0017452284,0.9208254,0.00003074314,0.00008886123,0.06882226,0.0034833455,0.0007816683,0.0026587546,0.00019865729,0.0012593874,0.00004331812],"about_ca_topic_score_codex":0.0015857008,"about_ca_topic_score_gemma":0.0032853337,"teacher_disagreement_score":0.0017079763,"about_ca_system_score_codex":0.00046471754,"about_ca_system_score_gemma":0.00060276786,"threshold_uncertainty_score":0.0038942099},"labels":[],"label_agreement":null},{"id":"W2048628132","doi":"10.1038/modpathol.2014.119","title":"Collagenous gastritis: a morphologic and immunohistochemical study of 40 patients","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Microscopic Colitis","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Queen Elizabeth II Health Sciences Centre","funders":"Dalhousie University; Royal College of Physicians and Surgeons of Canada","keywords":"Pathology; Medicine; Collagenous colitis; Gastritis; Biopsy; Immunohistochemistry; Eosinophil; Intraepithelial lymphocyte; Gastroenterology; Stomach; Internal medicine; Epithelium; Diarrhea","score_opus":0.008472521189500506,"score_gpt":0.24610076624240612,"score_spread":0.2376282450529056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048628132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995603,0.0001000842,0.000034030316,0.000006598034,0.0000013253857,0.0000060183474,0.000041262694,0.0000013263378,0.00024899357],"genre_scores_gemma":[0.9994267,0.00014640548,0.00007702778,0.000015060446,0.000009946071,0.000007547819,0.0001406965,0.0000016849607,0.00017506456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997634,0.00003019526,0.000026659067,0.000061082595,0.000039052207,0.00007955725],"domain_scores_gemma":[0.99972266,0.000059655744,0.00005879649,0.000021414528,0.000031854015,0.000105644314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023811407,0.00045244436,0.00047214795,0.0013164487,0.0009121504,0.00047046013,0.00020729622,0.00038078427,0.0016895707],"category_scores_gemma":[0.00071635185,0.0004425388,0.0002938683,0.00088824576,0.0005468417,0.00041018933,0.0005438332,0.00018874597,0.00030863748],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004885529,0.00015860333,0.98405933,0.000025176818,0.00002711249,0.0064921496,0.00075184234,0.00003825976,0.004903561,0.000040153936,0.0000699072,0.0029453356],"study_design_scores_gemma":[0.000018761622,0.0004624861,0.98903847,0.0000060015636,0.0000263387,0.008729948,0.00084555993,0.00006814781,0.00036832556,0.000026792843,0.00040261925,0.000006441207],"about_ca_topic_score_codex":0.0015204743,"about_ca_topic_score_gemma":0.0014071026,"teacher_disagreement_score":0.0016895707,"about_ca_system_score_codex":0.00029378288,"about_ca_system_score_gemma":0.00026674452,"threshold_uncertainty_score":0.0056521893},"labels":[],"label_agreement":null},{"id":"W2049032356","doi":"10.1038/modpathol.2010.158","title":"International Society of Urological Pathology (ISUP) Consensus Conference on Handling and Staging of Radical Prostatectomy Specimens. Working group 3: extraprostatic extension, lymphovascular invasion and locally advanced disease","year":2010,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":238,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Toronto; Toronto General Hospital; University Health Network","funders":"","keywords":"Prostatectomy; Lymphovascular invasion; Medicine; Cystectomy; Surgical pathology; Prostate cancer; Anatomical pathology; Pathology; Stage (stratigraphy); Urology; Bladder cancer; Cancer; Metastasis; Internal medicine; Biology","score_opus":0.052948065757511896,"score_gpt":0.31150592752729106,"score_spread":0.2585578617697792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049032356","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018810708,0.99523795,0.00034973616,0.0013428031,0.0007663574,0.000044157343,0.00016316333,0.000017138627,0.0018905693],"genre_scores_gemma":[0.00075615774,0.99672395,0.00085511245,0.00042758725,0.00020081081,0.000031539912,0.00034020803,0.0000033240667,0.0006613881],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991849,0.00016320415,0.00016995393,0.000064365464,0.0003642777,0.000053291882],"domain_scores_gemma":[0.99775153,0.0006035815,0.00032991628,0.000052906453,0.001147652,0.00011440508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035073445,0.0010596026,0.0022862258,0.0067215343,0.000465637,0.0010754982,0.0025031487,0.0011063705,0.0033729316],"category_scores_gemma":[0.0026237774,0.0005306314,0.0009534454,0.005947118,0.00083287427,0.0014610216,0.0010797586,0.0018697288,0.002182864],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006802271,0.00004198118,0.00059818703,0.018820934,0.00011020253,0.00021302853,0.0000622167,0.00015986171,0.00074952585,0.000837766,0.10091352,0.87742484],"study_design_scores_gemma":[0.000034045283,0.00006584372,0.0050191875,0.019049507,0.0004116899,0.0020453602,0.00016009038,0.00009024806,0.00054468965,0.0010774278,0.9714707,0.000031352498],"about_ca_topic_score_codex":0.00668085,"about_ca_topic_score_gemma":0.014046429,"teacher_disagreement_score":0.0067215343,"about_ca_system_score_codex":0.0014104223,"about_ca_system_score_gemma":0.0056394427,"threshold_uncertainty_score":0.018548846},"labels":[],"label_agreement":null},{"id":"W2050238266","doi":"10.1038/modpathol.3800362","title":"E-cadherin alterations in atypical lobular hyperplasia and lobular carcinoma in situ of the breast","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":117,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"U.S. Army","keywords":"Lobular carcinoma; Pathology; Invasive lobular carcinoma; Biology; Loss of heterozygosity; Immunohistochemistry; Hyperplasia; Carcinoma in situ; Carcinoma; Breast cancer; Medicine; Cancer; Ductal carcinoma; Gene","score_opus":0.012426661268903936,"score_gpt":0.2363566975175228,"score_spread":0.22393003624861887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050238266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99837863,0.0006093802,0.00017563712,0.000021112655,0.000005050022,0.000003184356,0.000022029904,0.000006763072,0.00077826605],"genre_scores_gemma":[0.99948335,0.00018630754,0.0001035336,0.000007900996,0.000006254644,0.0000018165254,0.000023385934,8.932068e-7,0.00018663972],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998222,0.000043135544,0.000025116771,0.000020956088,0.00004209542,0.000046552832],"domain_scores_gemma":[0.999637,0.00014068102,0.00007520424,0.00003086915,0.00005322424,0.00006293865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003531782,0.00019337535,0.00028097074,0.0014484656,0.00027935763,0.0003873821,0.000224117,0.00037169197,0.0015223701],"category_scores_gemma":[0.0011170959,0.00026459256,0.00010893201,0.0006910184,0.00048212442,0.00042973415,0.00028334203,0.00020594416,0.00020467448],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004341844,0.00034214798,0.45529887,0.00037911194,0.00016280432,0.045892823,0.0007923821,0.00046734142,0.46190187,0.0014089278,0.000422811,0.02858911],"study_design_scores_gemma":[0.0000780767,0.000479352,0.85716486,0.000013609971,0.00011880435,0.10139725,0.0009621924,0.0011137368,0.035744715,0.00081996986,0.0020821735,0.00002530702],"about_ca_topic_score_codex":0.0004818173,"about_ca_topic_score_gemma":0.00068790134,"teacher_disagreement_score":0.0015223701,"about_ca_system_score_codex":0.0002257155,"about_ca_system_score_gemma":0.00015272101,"threshold_uncertainty_score":0.0050927997},"labels":[],"label_agreement":null},{"id":"W2051274722","doi":"10.1038/modpathol.2011.116","title":"Gray zone lymphoma: chromosomal aberrations with immunophenotypic and clinical correlations","year":2011,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":145,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Deutsche Krebshilfe; National Cancer Institute; National Institutes of Health; Michael Smith Health Research BC; Canadian Institutes of Health Research; Cancer Research Society; Alexander von Humboldt-Stiftung","keywords":"Lymphoma; Immunophenotyping; Pathology; Hematopathology; Medicine; Non-Hodgkin's lymphoma; Cytogenetics; Biology; Immunology; Chromosome; Antigen; Genetics","score_opus":0.03444242583592626,"score_gpt":0.27459761025996976,"score_spread":0.2401551844240435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051274722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98335385,0.0038980173,0.002303722,0.00047937973,0.000025281937,0.00003509795,0.00019789112,0.000051864183,0.009654883],"genre_scores_gemma":[0.99838257,0.00047380893,0.000714528,0.00003853529,0.000043525302,0.000009142091,0.00007192601,0.000005595658,0.00026025006],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99954647,0.000154498,0.00006405483,0.0000735065,0.00009251911,0.000068876834],"domain_scores_gemma":[0.99874485,0.00058863364,0.00028707134,0.00012736405,0.00013426076,0.00011774465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007812365,0.0004091653,0.00029150897,0.002319516,0.00033846567,0.0007474839,0.0004440723,0.00050508283,0.0032072724],"category_scores_gemma":[0.0031819434,0.00022762296,0.00012460156,0.0015132603,0.0008757184,0.00089368917,0.00072983187,0.00035284137,0.00063625217],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014210026,0.00006903814,0.87728107,0.000092665156,0.000075339114,0.038420897,0.0004762019,0.0004338478,0.03737488,0.0021233074,0.0007289392,0.041502863],"study_design_scores_gemma":[0.00006965078,0.00031765568,0.78939366,0.000040930707,0.00018503863,0.1854765,0.0011863706,0.0018602418,0.01007304,0.0047143474,0.006653195,0.000029396104],"about_ca_topic_score_codex":0.00039795504,"about_ca_topic_score_gemma":0.00051531557,"teacher_disagreement_score":0.0032072724,"about_ca_system_score_codex":0.00032237626,"about_ca_system_score_gemma":0.00024443385,"threshold_uncertainty_score":0.0107293725},"labels":[],"label_agreement":null},{"id":"W2052739710","doi":"10.1038/modpathol.3800313","title":"Selected miscellaneous ovarian lesions: small cell carcinomas, mesothelial lesions, mesenchymal and mixed neoplasms, and non-neoplastic lesions","year":2004,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Ovary; Pathology; Medicine; Uterus; Small-cell carcinoma; Carcinoma; Biology; Internal medicine","score_opus":0.018642687657884394,"score_gpt":0.25086184437732645,"score_spread":0.23221915671944204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052739710","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017646741,0.99618286,0.0004920178,0.00037442896,0.0009806397,0.000007171865,0.000025613725,0.000019843592,0.0017409452],"genre_scores_gemma":[0.0010953731,0.9931918,0.000697608,0.0005710822,0.0012804967,0.000010221143,0.000106898435,0.000004690514,0.0030419193],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999828,0.000024803707,0.000026651738,0.000035667093,0.00006723405,0.00001758385],"domain_scores_gemma":[0.99952114,0.0001904902,0.0000554133,0.000020889267,0.00014988768,0.000062226776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050975085,0.001040432,0.0019342335,0.0030070036,0.000300044,0.00089852,0.0010864706,0.0011929708,0.004196702],"category_scores_gemma":[0.0007181886,0.00029050963,0.00040415965,0.00348841,0.00067264476,0.0015194251,0.00058785104,0.0016720576,0.0036426212],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006968921,0.000048138525,0.00030543504,0.0059069246,0.000045461773,0.00076847605,0.00003822749,0.00020420949,0.002922591,0.001469756,0.057854336,0.93036675],"study_design_scores_gemma":[0.000018134238,0.00005372905,0.0010081527,0.001083489,0.00007599996,0.0069181365,0.000055349283,0.00007938883,0.00090939004,0.0010384365,0.9887406,0.000019098343],"about_ca_topic_score_codex":0.00093191024,"about_ca_topic_score_gemma":0.0028906737,"teacher_disagreement_score":0.004196702,"about_ca_system_score_codex":0.00059763517,"about_ca_system_score_gemma":0.0007166192,"threshold_uncertainty_score":0.014039397},"labels":[],"label_agreement":null},{"id":"W2053009900","doi":"10.1038/modpathol.3800785","title":"High-level JAG1 mRNA and protein predict poor outcome in breast cancer","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":224,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Princess Margaret Cancer Centre; Hospital for Sick Children; Mount Sinai Hospital","funders":"National Cancer Institute; Society of University Surgeons","keywords":"JAG1; Medicine; Messenger RNA; Immunohistochemistry; Breast cancer; Pathology; Survival analysis; Internal medicine; Notch signaling pathway; Oncology; Receptor; Cancer; Gastroenterology; Biology; Gene","score_opus":0.016114564808894272,"score_gpt":0.2698407135056422,"score_spread":0.2537261486967479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053009900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985214,0.0006740237,0.00014711266,0.000112014575,0.000014106345,0.0000023184252,0.00009756062,0.000011127708,0.00042030614],"genre_scores_gemma":[0.99922407,0.00022721276,0.0001217085,0.000029085033,0.000021927439,0.0000043775235,0.000119910976,0.000003275907,0.0002484239],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999902,0.000028866185,0.000010176738,0.00001627833,0.00001912179,0.00002357585],"domain_scores_gemma":[0.99928844,0.00024082398,0.00020699356,0.000044340268,0.000054542743,0.0001647818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032177963,0.00020634908,0.0002536362,0.0009722414,0.0002835531,0.0005414439,0.00022902449,0.00051122234,0.0014119644],"category_scores_gemma":[0.0012400405,0.00020867627,0.0001355425,0.00065871625,0.00043879243,0.00026356554,0.0002705279,0.00052524277,0.0002833901],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006629748,0.000042129846,0.98081046,0.000020436722,0.000037979673,0.0003025661,0.00006167297,0.00010784798,0.0138265975,0.0000471321,0.00022132705,0.0038589283],"study_design_scores_gemma":[0.000008288256,0.00009747097,0.9943856,0.000004631407,0.000051081533,0.0016484989,0.00017619542,0.0004890582,0.0025279913,0.00020169064,0.00040406256,0.0000054257152],"about_ca_topic_score_codex":0.00044524178,"about_ca_topic_score_gemma":0.00062695856,"teacher_disagreement_score":0.0014119644,"about_ca_system_score_codex":0.00017326223,"about_ca_system_score_gemma":0.00014627639,"threshold_uncertainty_score":0.004723549},"labels":[],"label_agreement":null},{"id":"W2053255222","doi":"10.1038/modpathol.2008.110","title":"Immunohistochemistry for human concentrative nucleoside transporter 3 protein predicts fludarabine sensitivity in chronic lymphocytic leukemia","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Cancer Institute","keywords":"Chronic lymphocytic leukemia; Immunohistochemistry; Fludarabine; Vidarabine; Medicine; Internal medicine; Nucleoside analogue; Staining; Leukemia; Pathology; Nucleoside; Biology; Chemotherapy; Biochemistry","score_opus":0.02798037647127491,"score_gpt":0.30577671981757887,"score_spread":0.277796343346304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053255222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981505,0.0006583418,0.00019635401,0.00005667375,0.0000065399486,0.0000052706505,0.00004204825,0.000011392881,0.0008727611],"genre_scores_gemma":[0.99945325,0.00016981046,0.00014750956,0.000022316195,0.000008135355,0.0000036683184,0.000067614186,0.0000022050112,0.00012540458],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998654,0.00003359705,0.000013367042,0.000023073568,0.000024843888,0.000039724506],"domain_scores_gemma":[0.9995747,0.0001781394,0.00008381624,0.000032142656,0.00007179863,0.000059384012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000433983,0.0002456012,0.00017592883,0.00075890945,0.00028009905,0.00047412066,0.00023809656,0.00054510334,0.0011460923],"category_scores_gemma":[0.0007285279,0.00018259315,0.00013714485,0.00032425433,0.00041137822,0.00033011904,0.00013597474,0.00026738312,0.00022061836],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094505394,0.000052837077,0.90383816,0.000037996626,0.00004684133,0.0016920858,0.00011517357,0.00015945891,0.085690245,0.00009533412,0.00039318218,0.006933655],"study_design_scores_gemma":[0.000058635505,0.00031678987,0.96093345,0.000021194552,0.000119420714,0.012418347,0.0004105246,0.0021156254,0.021589927,0.00018929344,0.0018166131,0.000010177746],"about_ca_topic_score_codex":0.0019753114,"about_ca_topic_score_gemma":0.002519378,"teacher_disagreement_score":0.0019753114,"about_ca_system_score_codex":0.00039395416,"about_ca_system_score_gemma":0.00015809637,"threshold_uncertainty_score":0.0039275885},"labels":[],"label_agreement":null},{"id":"W2054546990","doi":"10.1038/modpathol.3880574","title":"Utilization of Cytokeratins 7 and 20 Does Not Differentiate between Barrett's Esophagus and Gastric Cardiac Intestinal Metaplasia","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Esophageal Cancer Research and Treatment","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; St. Michael's Hospital; McMaster University","funders":"","keywords":"Intestinal metaplasia; Barrett's esophagus; Esophagus; Dysplasia; Pathology; Medicine; Immunostaining; Staining; Gastroenterology; Metaplasia; Internal medicine; Immunohistochemistry; Adenocarcinoma; Cancer","score_opus":0.04929610050259327,"score_gpt":0.299969310124509,"score_spread":0.25067320962191575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054546990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99599564,0.0019388298,0.00037042334,0.000029929171,0.000010569419,0.000008665213,0.000018460065,0.000008558006,0.0016189683],"genre_scores_gemma":[0.9988285,0.00044669939,0.00051591755,0.000027091748,0.000009043592,0.000003372949,0.00006589259,0.000002521899,0.00010100153],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99920684,0.00019153643,0.00018518197,0.000088258595,0.0001828478,0.00014538135],"domain_scores_gemma":[0.9975085,0.0010584405,0.00054719264,0.00019679539,0.00037482858,0.00031413912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015003027,0.0003294277,0.00036889635,0.0014442392,0.00023173967,0.0004711041,0.00029754257,0.0006540882,0.00061324093],"category_scores_gemma":[0.0033910014,0.00022117732,0.00030253927,0.0005986654,0.0006602958,0.000596118,0.00047526768,0.000286151,0.0002647119],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007805956,0.00006128516,0.8658253,0.00016834425,0.000100682984,0.00401375,0.00030709725,0.00008298068,0.11617037,0.00013876466,0.00006727643,0.012283632],"study_design_scores_gemma":[0.000021652355,0.00067625364,0.94298035,0.000052898864,0.00015342908,0.026614454,0.0006137385,0.001239186,0.025983807,0.00023786507,0.0014131266,0.000013243875],"about_ca_topic_score_codex":0.0006075653,"about_ca_topic_score_gemma":0.0013135612,"teacher_disagreement_score":0.0015003027,"about_ca_system_score_codex":0.00018513287,"about_ca_system_score_gemma":0.00017553355,"threshold_uncertainty_score":0.007934511},"labels":[],"label_agreement":null},{"id":"W2054707400","doi":"10.1038/modpathol.3880293","title":"How Familial Cancer Genes and Environmentally Induced Oncogenes Have Changed the Endocrine Landscape","year":2001,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Multiple endocrine neoplasia type 2; Thyroid carcinoma; Carcinogenesis; Proto-Oncogene Proteins c-ret; Medullary carcinoma; Pathology; Cancer research; Cancer; Thyroid; Biology; Transmembrane protein; Tyrosine kinase; Endocrine system; Gene; Receptor tyrosine kinase; Medicine; Mutation; Receptor; Endocrinology; Genetics; Germline mutation; Hormone","score_opus":0.0656762713315761,"score_gpt":0.3154037030121552,"score_spread":0.2497274316805791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054707400","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018791587,0.995453,0.00055380864,0.001227243,0.00071282417,0.0000028011104,0.00001040578,0.000011171419,0.0018407687],"genre_scores_gemma":[0.0009500414,0.9959266,0.00055270386,0.0007592714,0.0006659075,0.0000038404855,0.000016451908,0.0000018178683,0.0011233155],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981993,0.000039686613,0.00002379001,0.00004043252,0.00006262766,0.000013608269],"domain_scores_gemma":[0.9993019,0.00039609763,0.000051382376,0.00003055002,0.00017001775,0.00005007258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008226418,0.00083766005,0.0011736546,0.0018656824,0.00041092574,0.0012838403,0.00092947704,0.001615003,0.0023529485],"category_scores_gemma":[0.0010752877,0.00021661242,0.000295495,0.0020888497,0.0011601395,0.0020514347,0.0005849846,0.0022936414,0.0015264997],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010954711,0.00004986968,0.00044409465,0.0064347372,0.000069996975,0.00076116587,0.0001132984,0.00054182013,0.0037063817,0.009910924,0.037112743,0.9407454],"study_design_scores_gemma":[0.000019797659,0.00004454966,0.0009446056,0.0011184425,0.00006742662,0.0034667398,0.00014124192,0.000094293464,0.00077442505,0.0066174143,0.9866899,0.000021065374],"about_ca_topic_score_codex":0.0011623097,"about_ca_topic_score_gemma":0.0027610483,"teacher_disagreement_score":0.0023529485,"about_ca_system_score_codex":0.00091225764,"about_ca_system_score_gemma":0.00080988824,"threshold_uncertainty_score":0.007871389},"labels":[],"label_agreement":null},{"id":"W2057026778","doi":"10.1038/modpathol.2010.189","title":"P-cadherin expression as a prognostic biomarker in a 3992 case tissue microarray series of breast cancer","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Centre for Advancing Health Outcomes; University of British Columbia","funders":"Canadian Institutes of Health Research; Sanofi; Pfizer","keywords":"Tissue microarray; Pathology; Breast cancer; Biomarker; Series (stratigraphy); Cancer; Medicine; Biology; Immunohistochemistry; Oncology; Internal medicine","score_opus":0.0169413915439133,"score_gpt":0.3010328129143484,"score_spread":0.28409142137043514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057026778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984174,0.00025426756,0.00032613685,0.000036000303,0.000010301472,0.000008505253,0.00018637294,0.000011220802,0.0007497104],"genre_scores_gemma":[0.9991547,0.00009747682,0.0002317059,0.000010644737,0.0000142940235,0.000011427314,0.0002714971,0.000004445065,0.00020383023],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99948287,0.00008183791,0.00006293021,0.00014952388,0.000118000105,0.00010483982],"domain_scores_gemma":[0.99945694,0.00019612354,0.00008711798,0.00010316845,0.000097333126,0.000059303675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045471344,0.00028613955,0.00037016525,0.0018149163,0.00076296285,0.00062276126,0.00040730066,0.0004662019,0.0014105386],"category_scores_gemma":[0.0017025564,0.00045480815,0.00023028704,0.0012112563,0.0003979723,0.0003817258,0.00036429387,0.00021469052,0.00044717686],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00085076655,0.00012139093,0.9209563,0.000068050766,0.00009787366,0.021879133,0.00047368865,0.00038405685,0.04217402,0.00014446495,0.00078107364,0.012069267],"study_design_scores_gemma":[0.000021657515,0.00025189508,0.92275745,0.000011898106,0.00020879408,0.05924919,0.00063420547,0.002024889,0.0125716645,0.00013232265,0.0021145253,0.000021435226],"about_ca_topic_score_codex":0.0016879451,"about_ca_topic_score_gemma":0.0025719455,"teacher_disagreement_score":0.0018149163,"about_ca_system_score_codex":0.0004016803,"about_ca_system_score_gemma":0.00031016246,"threshold_uncertainty_score":0.004718721},"labels":[],"label_agreement":null},{"id":"W2057599936","doi":"10.1038/modpathol.2013.223","title":"DLC1 expression is reduced in human cutaneous melanoma and correlates with patient survival","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Vancouver Coastal Health Research Institute; University of British Columbia; Vancouver Coastal Health","funders":"","keywords":"Melanoma; Tissue microarray; Medicine; Immunohistochemistry; Pathology; Cancer; Nodular melanoma; Oncology; Cancer research; Internal medicine","score_opus":0.014738891685513953,"score_gpt":0.27219743330382185,"score_spread":0.2574585416183079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057599936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972037,0.001386741,0.00015401511,0.000058512032,0.00000593688,0.0000039334573,0.0003289148,0.000012601272,0.0008456738],"genre_scores_gemma":[0.99885833,0.00021575458,0.00006694852,0.000025037649,0.000004591352,0.000004458672,0.0003084391,0.000003618882,0.00051278574],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999846,0.000021572696,0.00001366225,0.000039021295,0.00004253062,0.000037097456],"domain_scores_gemma":[0.9995726,0.00008929314,0.00018065788,0.00003144193,0.000068032816,0.00005797408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014321697,0.00010095612,0.00018871628,0.0007906367,0.00023497961,0.0005270306,0.00016615582,0.00024181863,0.0017448016],"category_scores_gemma":[0.00061603176,0.00011155976,0.000109417364,0.0005697102,0.0001896637,0.000198947,0.00019013719,0.00028539085,0.00024186313],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015522677,0.00007826211,0.7447447,0.00011762243,0.00011609345,0.0010235619,0.00025839562,0.00024648363,0.22839522,0.00016949604,0.0009888847,0.022308953],"study_design_scores_gemma":[0.000011020274,0.00010999217,0.97688305,0.00001089098,0.000063953885,0.0022764134,0.0002669245,0.000418453,0.017255453,0.000089202054,0.002607224,0.0000074401537],"about_ca_topic_score_codex":0.0011162428,"about_ca_topic_score_gemma":0.001047683,"teacher_disagreement_score":0.0017448016,"about_ca_system_score_codex":0.00034197932,"about_ca_system_score_gemma":0.0001204448,"threshold_uncertainty_score":0.0058369637},"labels":[],"label_agreement":null},{"id":"W2060168804","doi":"10.1038/modpathol.2008.193","title":"Diagnosis of urothelial carcinoma from urine","year":2009,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":181,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec","funders":"","keywords":"Urothelial carcinoma; Pathology; Medicine; Urine; Carcinoma; Urology; Internal medicine; Cancer; Bladder cancer","score_opus":0.05398519789950733,"score_gpt":0.3349439624701023,"score_spread":0.28095876457059493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060168804","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015688212,0.99837685,0.00020680355,0.00023502711,0.00026105696,0.0000054920924,0.00001949011,0.000008224559,0.0007301612],"genre_scores_gemma":[0.001650954,0.99668175,0.00040975434,0.00032818317,0.0003688807,0.0000037978893,0.00006368404,0.0000015445489,0.00049146253],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996057,0.00006321676,0.000076729586,0.00007911664,0.00015088139,0.000024328181],"domain_scores_gemma":[0.99928147,0.00035299727,0.00012734596,0.000021183361,0.00018043691,0.00003658108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005955682,0.00091953704,0.0018006061,0.0038631123,0.00026891398,0.0009245097,0.0014197418,0.001102547,0.002600678],"category_scores_gemma":[0.0015488385,0.00039522102,0.0007385925,0.0022645127,0.00078284205,0.0018426742,0.00067775697,0.0012958113,0.0018388105],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006538231,0.00004011966,0.0008037588,0.020035923,0.000092462884,0.0015325426,0.000044488275,0.00017961548,0.0015256676,0.0007400252,0.026121704,0.9488182],"study_design_scores_gemma":[0.000038907387,0.00013521651,0.0059936396,0.013308388,0.0005510815,0.026277145,0.00023755898,0.00024033863,0.0018466165,0.0021933506,0.94910985,0.00006783757],"about_ca_topic_score_codex":0.0020814075,"about_ca_topic_score_gemma":0.0032893382,"teacher_disagreement_score":0.0038631123,"about_ca_system_score_codex":0.0006425379,"about_ca_system_score_gemma":0.0011570486,"threshold_uncertainty_score":0.008700132},"labels":[],"label_agreement":null},{"id":"W2063074944","doi":"10.1038/modpathol.3800679","title":"Expression of the plasmacytoid dendritic cell marker BDCA-2 supports a spectrum of maturation among CD4+ CD56+ hematodermic neoplasms","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous lymphoproliferative disorders research","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; BC Cancer Agency; University Research Committee, Emory University; University of Nebraska Medical Center; Emory University; University of Pennsylvania; National Institutes of Health; Leukemia and Lymphoma Society","keywords":"Plasmacytoid dendritic cell; Hematopathology; Biology; Myeloid; Haematopoiesis; Pathology; Terminal deoxynucleotidyl transferase; Lineage markers; Antigen; Dendritic cell; Lineage (genetic); Cancer research; Immunology; Immunohistochemistry; Medicine; Phenotype; Stem cell; Cell biology; Gene; Cytogenetics","score_opus":0.006420647750326185,"score_gpt":0.2379158433905059,"score_spread":0.2314951956401797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063074944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928039,0.00056837517,0.0020342285,0.00004123438,0.000010866718,0.000027202483,0.00018912867,0.000066716646,0.004258426],"genre_scores_gemma":[0.99743456,0.00024350242,0.0014010794,0.000019322728,0.000008936685,0.000014788174,0.00027860084,0.000019521358,0.000579799],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998431,0.000032064967,0.000022755601,0.000029370502,0.000031412223,0.00004121914],"domain_scores_gemma":[0.99976104,0.000057213572,0.00004819488,0.000060848495,0.000041005223,0.00003180051],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017947542,0.0001461417,0.00016458453,0.0007169969,0.00032255027,0.00054844655,0.000176557,0.0002590844,0.00282552],"category_scores_gemma":[0.00042997592,0.00015507196,0.00012335282,0.00032846618,0.00023534306,0.00035484054,0.00036039826,0.00031750396,0.00068974827],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039719287,0.000023428984,0.020318963,0.000049562655,0.000014128562,0.0007373185,0.00010652138,0.00006573729,0.971086,0.0005769384,0.00012286287,0.0065014507],"study_design_scores_gemma":[0.00008901928,0.00046313455,0.24697939,0.000050813214,0.00012919401,0.025223244,0.00082489423,0.002694881,0.70288825,0.0019559085,0.018674836,0.000026495887],"about_ca_topic_score_codex":0.00032756463,"about_ca_topic_score_gemma":0.00041241755,"teacher_disagreement_score":0.00282552,"about_ca_system_score_codex":0.00017102389,"about_ca_system_score_gemma":0.000114986426,"threshold_uncertainty_score":0.009452343},"labels":[],"label_agreement":null},{"id":"W2064816896","doi":"10.1097/01.mp.0000036342.73003.55","title":"Topoisomerase IIα Expression in Pituitary Adenomas and Carcinomas: Relationship to Tumor Behavior","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer therapeutics and mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Xunta de Galicia; Ministerio de Ciencia y Tecnología","keywords":"Pathology; Topoisomerase; Adenoma; Carcinoma; Hematopathology; Medicine; Biology; Enzyme; Cytogenetics; Gene; Biochemistry","score_opus":0.02614314937937303,"score_gpt":0.2527048563475703,"score_spread":0.22656170696819725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064816896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991357,0.0005283421,0.00009283614,0.0000067564506,0.0000017523654,0.0000030763913,0.000061691055,0.0000045258726,0.00016539799],"genre_scores_gemma":[0.99946874,0.00023439011,0.00007854336,0.0000035673786,0.0000045998263,0.0000050038234,0.00008939633,0.000001311672,0.00011436964],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99985194,0.000023246574,0.000016325743,0.00003785625,0.00003718705,0.00003340978],"domain_scores_gemma":[0.9992086,0.00020045487,0.00025118803,0.000045626664,0.00008841982,0.00020577664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023753018,0.0002053475,0.00016230266,0.0008137709,0.00019812393,0.00031417605,0.00009253075,0.00017032686,0.0005791155],"category_scores_gemma":[0.0007816204,0.00017054527,0.00013010723,0.0004024547,0.0002253044,0.00020870291,0.00016245423,0.00021089191,0.00017703357],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014487825,0.000046912446,0.8926769,0.00004093814,0.00006782175,0.00085506146,0.00021294171,0.0000966283,0.09923534,0.00002718543,0.00003937891,0.0052521494],"study_design_scores_gemma":[0.000005701473,0.00026028597,0.99283534,0.000002009342,0.000024848114,0.0023389799,0.0001466473,0.00018526416,0.0039503104,0.00002202301,0.00022410446,0.0000045256784],"about_ca_topic_score_codex":0.0012664577,"about_ca_topic_score_gemma":0.0012191376,"teacher_disagreement_score":0.0012664577,"about_ca_system_score_codex":0.0002267699,"about_ca_system_score_gemma":0.00015412159,"threshold_uncertainty_score":0.0025182366},"labels":[],"label_agreement":null},{"id":"W2065027700","doi":"10.1038/modpathol.3800620","title":"Immunophenotypic diversity of endometrial adenocarcinomas: implications for differential diagnosis","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":219,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Credit Valley Hospital","funders":"","keywords":"Carcinosarcoma; Serous carcinoma; Serous fluid; Pathology; Vimentin; Immunohistochemistry; Medicine; Carcinoma; Immunophenotyping; Clear cell carcinoma; Carcinoembryonic antigen; Differential diagnosis; Adenocarcinoma; Cancer; Internal medicine; Antigen; Ovarian cancer","score_opus":0.039004688596208044,"score_gpt":0.2852506986849097,"score_spread":0.24624601008870167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065027700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99167836,0.002394562,0.0014855956,0.00020043456,0.000021554808,0.000016215972,0.00007479628,0.0000152187295,0.0041134153],"genre_scores_gemma":[0.99789953,0.000869824,0.0008621061,0.00005568551,0.000050582268,0.000008360019,0.000059881353,0.000004983366,0.00018908686],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99967015,0.00012532908,0.000030855743,0.00004699177,0.000061456805,0.00006515462],"domain_scores_gemma":[0.9992969,0.00029922702,0.00011619804,0.00006901215,0.00012217325,0.00009650138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007418593,0.00014884047,0.0002581004,0.0014122038,0.00044132737,0.00058937055,0.00031531302,0.00030844274,0.0019085165],"category_scores_gemma":[0.00161177,0.00009857755,0.00013954956,0.0005827048,0.00036698172,0.00049969816,0.00049011776,0.00027336073,0.00029515993],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013211592,0.000092223025,0.6408056,0.00015857986,0.000102656304,0.0058196792,0.0010384773,0.00036734968,0.288325,0.0024349992,0.0006527352,0.058881525],"study_design_scores_gemma":[0.00006684912,0.0006002108,0.89430654,0.00008699831,0.00022655325,0.051707137,0.003818135,0.0031809115,0.029631669,0.0044709034,0.011867248,0.000036771344],"about_ca_topic_score_codex":0.00027844158,"about_ca_topic_score_gemma":0.00032926977,"teacher_disagreement_score":0.0019085165,"about_ca_system_score_codex":0.00022051952,"about_ca_system_score_gemma":0.00012995186,"threshold_uncertainty_score":0.006384611},"labels":[],"label_agreement":null},{"id":"W2065341140","doi":"10.1038/modpathol.3800418","title":"Chorioamnionitis is associated with placental transmission of human immunodeficiency virus-1 subtype E in the early gestational period","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HIV/AIDS Research and Interventions","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Center for Genetic Engineering and Biotechnology","keywords":"Chorioamnionitis; Decidua; Immunostaining; Fetus; In utero; Decidual cells; Gestation; Placenta; Biology; Andrology; Medicine; Pregnancy; Immunology; Pathology; Immunohistochemistry","score_opus":0.021247730647879555,"score_gpt":0.30863119544280065,"score_spread":0.2873834647949211,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065341140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963504,0.0014284238,0.00017987369,0.0002622861,0.000022625649,0.000013149045,0.00007438083,0.000020942714,0.0016478339],"genre_scores_gemma":[0.9986268,0.00087563304,0.00017125178,0.000029960285,0.00004326056,0.0000048622296,0.00004800496,0.0000033416243,0.0001969296],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99950266,0.00016194711,0.00005332591,0.00007675359,0.000066384666,0.0001388752],"domain_scores_gemma":[0.99665135,0.001286734,0.0013368917,0.00023917037,0.00011083913,0.00037507157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047787937,0.0005733201,0.00047496564,0.0014719225,0.00067379005,0.00063108106,0.00061019266,0.0011818013,0.0026810775],"category_scores_gemma":[0.0069710244,0.00071380555,0.0003006949,0.0010513098,0.0010435898,0.00063158374,0.0006203517,0.001227204,0.00023566595],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022026973,0.00016312285,0.86255264,0.00017694612,0.00008100273,0.117687754,0.0006375506,0.00025817403,0.0076837745,0.00059944915,0.0005432792,0.007413614],"study_design_scores_gemma":[0.000071957926,0.00044645937,0.73545533,0.000112242706,0.00010854955,0.25811276,0.0012163694,0.00054124516,0.0022174232,0.0007953551,0.0008820935,0.000040198895],"about_ca_topic_score_codex":0.0038065296,"about_ca_topic_score_gemma":0.0021042228,"teacher_disagreement_score":0.0038065296,"about_ca_system_score_codex":0.000510308,"about_ca_system_score_gemma":0.00059788214,"threshold_uncertainty_score":0.0089690685},"labels":[],"label_agreement":null},{"id":"W2065973638","doi":"10.1038/modpathol.3800206","title":"Ets-1 transcription factor is widely expressed in benign and malignant melanocytes and its expression has no significant association with prognosis","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Melanoma and MAPK Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Royal University Hospital","funders":"","keywords":"Immunohistochemistry; Melanoma; Medicine; Pathology; Breslow Thickness; Correlation; Exact test; Mann–Whitney U test; Spearman's rank correlation coefficient; Oncology; Internal medicine; Cancer; Cancer research","score_opus":0.02021665198394415,"score_gpt":0.21697667410773983,"score_spread":0.19676002212379567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065973638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934823,0.0038189027,0.0007400425,0.00008347444,0.000021400529,0.000004676884,0.00027027825,0.00001998833,0.001558818],"genre_scores_gemma":[0.9975331,0.00090800074,0.00014740191,0.00001201284,0.00001910815,0.0000039514903,0.0002536577,0.0000043873324,0.0011183324],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998535,0.000029185432,0.000016939708,0.000027225356,0.00004639265,0.000026732147],"domain_scores_gemma":[0.99944955,0.00019720389,0.00015494545,0.000039400213,0.00008253172,0.00007644417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029405722,0.00021562948,0.00024009902,0.00052060385,0.00019248831,0.00026464072,0.00019252741,0.00023970584,0.0026415475],"category_scores_gemma":[0.00061299145,0.00010132791,0.00019706566,0.00046142968,0.00026040408,0.00028168794,0.00023148525,0.00025618126,0.00044671865],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017514179,0.0000729557,0.71875894,0.00020157821,0.00019704353,0.0015464051,0.0003115243,0.00018301644,0.23898731,0.00059249584,0.00035998394,0.037037387],"study_design_scores_gemma":[0.00001682433,0.0003013975,0.95926595,0.000021482843,0.00013975614,0.006491822,0.00029067716,0.0003959616,0.028367853,0.00080613623,0.003886924,0.000015256764],"about_ca_topic_score_codex":0.00033831774,"about_ca_topic_score_gemma":0.00033769585,"teacher_disagreement_score":0.0026415475,"about_ca_system_score_codex":0.00013920401,"about_ca_system_score_gemma":0.00012260172,"threshold_uncertainty_score":0.008836865},"labels":[],"label_agreement":null},{"id":"W2066867399","doi":"10.1038/modpathol.3800055","title":"Benign mimickers of prostatic adenocarcinoma","year":2004,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Urologic and reproductive health conditions","field":"Medicine","cited_by":179,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Malakoplakia; Adenocarcinoma; Atypical adenomatous hyperplasia; Medicine; Pathology; Differential diagnosis; Hyperplasia; Prostatitis; Cancer; Biopsy; Prostate; Choledochal cysts; Cyst; Internal medicine","score_opus":0.08000020124250869,"score_gpt":0.3780264922058089,"score_spread":0.29802629096330024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066867399","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006796672,0.9967998,0.00024756297,0.00015896792,0.00027041303,0.0000051979464,0.000018138777,0.000013878359,0.0018062426],"genre_scores_gemma":[0.0044866386,0.99274147,0.0003999433,0.0003324038,0.00067807146,0.0000042933707,0.000050541617,0.0000028186566,0.0013038354],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997162,0.00004273806,0.000052997184,0.000051850635,0.00010971788,0.000026323778],"domain_scores_gemma":[0.99955934,0.0002049181,0.000100727004,0.000014940866,0.00007368403,0.00004646281],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000266128,0.00090442906,0.001516698,0.003956995,0.00028157758,0.0009900786,0.00093237124,0.0008973937,0.0025114696],"category_scores_gemma":[0.0008859472,0.00032602865,0.0004282838,0.0033269136,0.0005374938,0.0016095855,0.00068328844,0.0009206438,0.0014792292],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006865613,0.000050628056,0.0018617006,0.011391243,0.000078361336,0.011888521,0.000079317564,0.00039593782,0.0018983367,0.00066310965,0.01876155,0.9528626],"study_design_scores_gemma":[0.00003609567,0.00014215818,0.010997126,0.007064591,0.0004237249,0.17796206,0.00037855128,0.0003467371,0.0014770846,0.0021338651,0.7989654,0.00007249051],"about_ca_topic_score_codex":0.0010821064,"about_ca_topic_score_gemma":0.0028673783,"teacher_disagreement_score":0.003956995,"about_ca_system_score_codex":0.00039788993,"about_ca_system_score_gemma":0.0007486145,"threshold_uncertainty_score":0.008401692},"labels":[],"label_agreement":null},{"id":"W2067135044","doi":"10.1038/modpathol.2009.75","title":"Distinction of hepatocellular adenoma from hepatocellular carcinoma with and without cirrhosis using E-cadherin and matrix metalloproteinase immunohistochemistry","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Galectins and Cancer Biology","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Hepatocellular carcinoma; Immunohistochemistry; Pathology; Cirrhosis; Medicine; Cadherin; Internal medicine; Biology; Cell","score_opus":0.012760660463309773,"score_gpt":0.230651212667749,"score_spread":0.2178905522044392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067135044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903257,0.00204996,0.004837853,0.00012600588,0.000069539485,0.00006870364,0.00007855216,0.00005542078,0.0023883318],"genre_scores_gemma":[0.9950321,0.00075168925,0.0036758084,0.000036153324,0.000054108543,0.00002138328,0.00013130688,0.00001201986,0.00028539004],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99947065,0.00011202327,0.00010903532,0.0000619814,0.00009818332,0.00014813931],"domain_scores_gemma":[0.99871016,0.0005837639,0.00011614897,0.00015048851,0.00023643782,0.00020291738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001599903,0.000403652,0.00063604995,0.0023200721,0.000345014,0.0008117027,0.00043326992,0.0005344345,0.0012589085],"category_scores_gemma":[0.0019374929,0.0003855342,0.00034179454,0.0007090461,0.00083592784,0.0010500937,0.000762586,0.0004983192,0.00040196645],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009647899,0.00028549763,0.28900266,0.0007505845,0.00029058158,0.018627765,0.0011214607,0.0001601324,0.6313758,0.001313224,0.00033327608,0.047091067],"study_design_scores_gemma":[0.00039769415,0.0017667847,0.7408164,0.00010180028,0.0005656124,0.079603456,0.0024652758,0.0059503643,0.16188124,0.0024814592,0.0038613062,0.000108726075],"about_ca_topic_score_codex":0.00089400215,"about_ca_topic_score_gemma":0.0012551999,"teacher_disagreement_score":0.0023200721,"about_ca_system_score_codex":0.00025725528,"about_ca_system_score_gemma":0.0002906235,"threshold_uncertainty_score":0.008461237},"labels":[],"label_agreement":null},{"id":"W2067433154","doi":"10.1038/modpathol.3880312","title":"Immunohistochemical Diagnosis of Papillary Thyroid Carcinoma","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":341,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Pathology; Immunohistochemistry; Staining; Thyroid carcinoma; Medicine; Thyroid nodules; Carcinoma; Thyroid; Malignancy; Internal medicine","score_opus":0.016144439532600235,"score_gpt":0.2649063534660525,"score_spread":0.2487619139334523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067433154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90873057,0.013170855,0.012858497,0.0017204764,0.0003415541,0.000112906244,0.00024385608,0.00028812597,0.06253318],"genre_scores_gemma":[0.986771,0.0026472865,0.0060467077,0.00012907284,0.00016188403,0.000026821304,0.00020850847,0.000023670169,0.0039851605],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99960715,0.00006104091,0.000058719383,0.00005667678,0.00011590602,0.00010044528],"domain_scores_gemma":[0.9995365,0.0001487017,0.00003440897,0.00007286477,0.00015368735,0.000053777658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010628155,0.0003393922,0.00023450759,0.0012407316,0.00045504447,0.000482138,0.0005014156,0.00059742475,0.0047452915],"category_scores_gemma":[0.0009033659,0.00026987743,0.00028318889,0.0006111763,0.00061754574,0.0006984377,0.00043310248,0.00035516542,0.0010080923],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007912605,0.00026848546,0.11801591,0.00084081135,0.0001798021,0.04294653,0.0009445164,0.0004777287,0.75323147,0.0085493885,0.0034072106,0.07034695],"study_design_scores_gemma":[0.00019622371,0.0010188179,0.23729515,0.00041073593,0.001015261,0.19568188,0.0021111078,0.012050268,0.40063822,0.0091845505,0.14032367,0.00007404239],"about_ca_topic_score_codex":0.00093226414,"about_ca_topic_score_gemma":0.001213881,"teacher_disagreement_score":0.0047452915,"about_ca_system_score_codex":0.0004954802,"about_ca_system_score_gemma":0.00036852976,"threshold_uncertainty_score":0.015874624},"labels":[],"label_agreement":null},{"id":"W2067736210","doi":"10.1038/modpathol.2012.230","title":"FG has no added value in prediction of mortality after partial and radical nephrectomy for chromophobe renal cell carcinoma patients","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Nephrectomy; Chromophobe cell; Medicine; Renal cell carcinoma; Context (archaeology); Proportional hazards model; Urology; Confidence interval; Kidney cancer; Stage (stratigraphy); Cancer; Internal medicine; Surgery; Clear cell; Kidney; Biology","score_opus":0.024559840618051016,"score_gpt":0.23489104208576297,"score_spread":0.21033120146771195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067736210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965329,0.0014411376,0.00019316707,0.00030342964,0.00011366703,0.0000054541233,0.0003434158,0.000016359118,0.00105044],"genre_scores_gemma":[0.9988379,0.0002165384,0.00012303606,0.00005845631,0.000116501426,0.0000022036747,0.00036837516,0.0000032055664,0.00027382368],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996238,0.0001335374,0.00003218055,0.00005917278,0.00007603894,0.00007526201],"domain_scores_gemma":[0.9978846,0.0009159028,0.00032669515,0.0001696219,0.00017190275,0.00053131825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008773901,0.0004982803,0.000701857,0.0005959862,0.00035557436,0.00077766535,0.0005697865,0.00086278823,0.0017021674],"category_scores_gemma":[0.0036016311,0.00015958368,0.0010476111,0.00063457136,0.00034663724,0.00077398465,0.00042300922,0.00081796787,0.0003036605],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010505023,0.000051927167,0.99267876,0.000020729476,0.0001255615,0.00015826058,0.000024853107,0.00014657328,0.00023266459,0.000038057664,0.00018237112,0.005289769],"study_design_scores_gemma":[0.000030732976,0.00047494713,0.9957353,0.000017570976,0.00042301876,0.00034704688,0.0001483532,0.0017994901,0.00016429975,0.00039373225,0.00045122384,0.000014229355],"about_ca_topic_score_codex":0.0021373893,"about_ca_topic_score_gemma":0.0041509126,"teacher_disagreement_score":0.0021373893,"about_ca_system_score_codex":0.00036862073,"about_ca_system_score_gemma":0.00068851985,"threshold_uncertainty_score":0.00569427},"labels":[],"label_agreement":null},{"id":"W2068684103","doi":"10.1038/modpathol.2010.39","title":"The outcome of abstracts presented at the United States and Canadian Academy of Pathology annual meetings","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Presentation (obstetrics); Medicine; Surgical pathology; MEDLINE; Family medicine; Library science; Pathology; Medical physics; Computer science; Surgery; Political science","score_opus":0.3959340471751712,"score_gpt":0.46624304421187973,"score_spread":0.07030899703670851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068684103","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"evaluation","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":"evaluation","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12219552,0.58546656,0.013077914,0.02939178,0.039452977,0.003409215,0.1717223,0.00046952095,0.034814224],"genre_scores_gemma":[0.776977,0.0895797,0.0062521608,0.015193302,0.024838965,0.005884544,0.059840433,0.0006048759,0.020829022],"study_design_codex":"meta_analysis","study_design_gemma":"observational","domain_scores_codex":[0.9115305,0.036796615,0.03160266,0.0044889734,0.013655708,0.001925611],"domain_scores_gemma":[0.71615124,0.18493403,0.038328663,0.01305523,0.042602126,0.004928794],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.06709734,0.0025266465,0.009493825,0.013627192,0.0013521134,0.0056230673,0.0011299864,0.0042561246,0.021861201],"category_scores_gemma":[0.257599,0.0008290238,0.018231595,0.009760109,0.0011080496,0.003222665,0.0037117908,0.0033460779,0.0042577498],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.04716575,0.00035412674,0.21773411,0.15081961,0.25547245,0.0012311393,0.0010615867,0.000854957,0.0027847611,0.0023437096,0.18463388,0.1355439],"study_design_scores_gemma":[0.008021249,0.0032142391,0.31757793,0.02475036,0.48313293,0.0022011744,0.0013149199,0.0015041558,0.0033066066,0.0072727418,0.14719072,0.00051303155],"about_ca_topic_score_codex":0.0026421228,"about_ca_topic_score_gemma":0.005414059,"teacher_disagreement_score":0.9973579,"about_ca_system_score_codex":0.0028569389,"about_ca_system_score_gemma":0.004254779,"threshold_uncertainty_score":0.35484892},"labels":[],"label_agreement":null},{"id":"W2069075525","doi":"10.1097/01.mp.0000075644.61258.85","title":"Aggressive Giant Fibroepithelial Lesion with Unusual Vascular Stroma—A Case Report","year":2003,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Stroma; Pathology; CD34; Stromal cell; Fibroadenoma; Basal lamina; Phyllodes tumor; Biology; Fibroepithelial Polyp; Anatomy; Medicine; Immunohistochemistry; Breast cancer; Cancer; Ultrastructure; Stem cell","score_opus":0.019198767963742452,"score_gpt":0.2598663461504769,"score_spread":0.24066757818673443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069075525","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9456171,0.0060842624,0.0073224176,0.004711716,0.00089432014,0.00035659992,0.0006943328,0.0010489734,0.033270296],"genre_scores_gemma":[0.9889136,0.0010073703,0.0032468776,0.00081879843,0.0025563804,0.000070656126,0.00017741817,0.00009129466,0.003117594],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9984503,0.00020831646,0.00017208816,0.00039692994,0.00022276511,0.00054952636],"domain_scores_gemma":[0.9956031,0.0014689333,0.00075301237,0.0010103025,0.0001851257,0.0009794373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079553126,0.003979576,0.0022240027,0.0042841174,0.0047423947,0.0029714268,0.0029459693,0.012208488,0.005884775],"category_scores_gemma":[0.0052831024,0.0024436438,0.0018494548,0.0026458397,0.00349112,0.00428138,0.0032563705,0.0037399943,0.002999227],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004167649,0.00002556994,0.0011870223,0.000022593471,0.0000066081034,0.997336,0.000070122434,0.000032495933,0.0005413282,0.00016117141,0.00012140648,0.0004539637],"study_design_scores_gemma":[0.00001592563,0.000034955072,0.0011617069,0.0000043872196,0.000014869782,0.9976739,0.00006666074,0.00016889721,0.00037292842,0.00015109875,0.00032561814,0.000008999964],"about_ca_topic_score_codex":0.0011272437,"about_ca_topic_score_gemma":0.0018566641,"teacher_disagreement_score":0.012208488,"about_ca_system_score_codex":0.001486715,"about_ca_system_score_gemma":0.0007656512,"threshold_uncertainty_score":0.01968652},"labels":[],"label_agreement":null},{"id":"W2069694588","doi":"10.1038/modpathol.2008.80","title":"Immunohistochemical analysis of possible chemoresistance markers identified by micro-arrays on serous ovarian carcinomas","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec; Université Laval","funders":"Cancer Research Society","keywords":"Immunohistochemistry; Serous fluid; Tissue microarray; Serous carcinoma; Medicine; Oncology; Ovarian cancer; Ovarian carcinoma; Pathology; Proportional hazards model; Internal medicine; Cancer; Cancer research","score_opus":0.01613132663670727,"score_gpt":0.2546286507459101,"score_spread":0.23849732410920285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069694588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98737866,0.0015947353,0.006986284,0.00011799287,0.000034263234,0.0000237813,0.00023040846,0.000098107455,0.0035357224],"genre_scores_gemma":[0.9930241,0.00047113022,0.0045953034,0.00003802602,0.000024212866,0.00003673775,0.0003005541,0.000012091266,0.0014977314],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99975187,0.000048966416,0.000027833705,0.00005029249,0.00006221693,0.00005873225],"domain_scores_gemma":[0.99975413,0.000098890014,0.000035005516,0.00003142549,0.000059841565,0.000020647345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027587818,0.00016120174,0.00023009282,0.00057827716,0.0002568979,0.0003287798,0.00016160512,0.00021003863,0.0014810989],"category_scores_gemma":[0.0003777661,0.00017383993,0.00015520079,0.0003836142,0.00016070816,0.0002590804,0.00018715087,0.00020573143,0.00034932335],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022782505,0.000024082783,0.007692521,0.0000543067,0.00002423459,0.00012832893,0.00006372724,0.00010752953,0.9858305,0.00015948982,0.00009308967,0.0055944514],"study_design_scores_gemma":[0.000024108009,0.00033172342,0.11376636,0.000009670228,0.00019404992,0.0014054879,0.00023027608,0.0043044817,0.8736313,0.00023926048,0.0058520185,0.000011297333],"about_ca_topic_score_codex":0.00033267212,"about_ca_topic_score_gemma":0.0007183915,"teacher_disagreement_score":0.0014810989,"about_ca_system_score_codex":0.00013715478,"about_ca_system_score_gemma":0.00011214285,"threshold_uncertainty_score":0.0049547553},"labels":[],"label_agreement":null},{"id":"W2071130163","doi":"10.1097/01.mp.0000052102.90815.82","title":"Current Perspectives on HER2 Testing: A Review of National Testing Guidelines","year":2003,"lang":"en","type":"review","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":269,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Women's College Hospital; University of Toronto","funders":"","keywords":"Medicine; Medical physics; Quality assurance; Trastuzumab; Pathology; Test (biology); Fish <Actinopterygii>; External quality assessment; Intensive care medicine; Internal medicine; Breast cancer; Cancer; Biology","score_opus":0.5663146011887417,"score_gpt":0.5638883755037888,"score_spread":0.0024262256849528763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071130163","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006233329,0.99749506,0.00011720498,0.0015302836,0.00021762289,0.0000034932993,0.000029148623,0.000006004263,0.00053893187],"genre_scores_gemma":[0.0003551501,0.9979996,0.0002971981,0.0009103681,0.00023499792,0.000006591245,0.000040249513,0.0000014413768,0.00015439122],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989135,0.0002545903,0.00026761182,0.00014403556,0.00036454707,0.000055749166],"domain_scores_gemma":[0.99313736,0.0044837664,0.0006971428,0.00009711698,0.0013614878,0.0002232286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039791088,0.00093268085,0.0029926866,0.00433495,0.000413497,0.0016450213,0.0018973732,0.0021289617,0.0041470747],"category_scores_gemma":[0.006944489,0.0004122167,0.000965645,0.005973506,0.00081956375,0.00265899,0.00094824453,0.0024474452,0.0015555781],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001308507,0.000059519774,0.00049052545,0.020256747,0.00013126378,0.00033976117,0.00008194826,0.0002807969,0.00040510052,0.0022020233,0.08894155,0.8866799],"study_design_scores_gemma":[0.00006979429,0.00009488692,0.002559843,0.02919381,0.0006072806,0.0018599558,0.00022493675,0.00016350177,0.00028176716,0.0023973037,0.96250486,0.000042130196],"about_ca_topic_score_codex":0.0052380734,"about_ca_topic_score_gemma":0.014060375,"teacher_disagreement_score":0.0052380734,"about_ca_system_score_codex":0.0019858265,"about_ca_system_score_gemma":0.0047639296,"threshold_uncertainty_score":0.021043777},"labels":[],"label_agreement":null},{"id":"W2072648072","doi":"10.1038/modpathol.3880440","title":"HER-2/neu in Breast Cancer: Interobserver Variability and Performance of Immunohistochemistry with 4 Antibodies Compared with Fluorescent In Situ Hybridization","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":220,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital; BC Cancer Agency","funders":"","keywords":"Immunohistochemistry; Breast cancer; Stain; Concordance; Fluorescence in situ hybridization; Pathology; Medicine; Polyclonal antibodies; Trastuzumab; Monoclonal antibody; Staining; Cancer; Antibody; Biology; Internal medicine; Immunology; Gene","score_opus":0.019161283652451934,"score_gpt":0.2999954879935629,"score_spread":0.28083420434111095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072648072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97408336,0.0015912273,0.021339517,0.000074133175,0.00008654195,0.00006485613,0.000102517566,0.00018178877,0.0024760908],"genre_scores_gemma":[0.99398106,0.0001702064,0.0052555418,0.000039201794,0.000029169885,0.00004235096,0.00010942385,0.00007478415,0.00029823676],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9715318,0.016998071,0.0031116435,0.003530047,0.0040232185,0.00080527784],"domain_scores_gemma":[0.9160454,0.06366161,0.005142019,0.0073431307,0.0071952175,0.0006125126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.039126553,0.00065702904,0.000730099,0.0023880238,0.0006862427,0.0011473835,0.0008738755,0.0011906509,0.0005137532],"category_scores_gemma":[0.048079867,0.0006919232,0.00090675015,0.0010175756,0.0013610447,0.001240725,0.0012295464,0.0007990295,0.0002873043],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0065444615,0.00021728082,0.8149066,0.0004265913,0.0027897295,0.0005034299,0.004245015,0.005924439,0.096234396,0.0006879791,0.00056647556,0.066953525],"study_design_scores_gemma":[0.00010903766,0.0009735118,0.92539257,0.0000670981,0.0012405157,0.0021883857,0.00093328697,0.0286416,0.037807923,0.0010297779,0.0015110448,0.000105366424],"about_ca_topic_score_codex":0.0018263818,"about_ca_topic_score_gemma":0.003968619,"teacher_disagreement_score":0.039126553,"about_ca_system_score_codex":0.0008134727,"about_ca_system_score_gemma":0.00031873223,"threshold_uncertainty_score":0.20692348},"labels":[],"label_agreement":null},{"id":"W2072885845","doi":"10.1038/modpathol.2011.119","title":"Pathological definition and clinical significance of vascular invasion in thyroid carcinomas of follicular epithelial derivation","year":2011,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":211,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Pathology; Thyroid; Vascular invasion; Medicine; Thyroid carcinoma; Pathological; Malignancy; Metastasis; Cancer; Internal medicine","score_opus":0.07776736218997715,"score_gpt":0.2870682164555572,"score_spread":0.20930085426558004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072885845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98216724,0.0054718093,0.0054263133,0.0001870132,0.000028097671,0.00003723551,0.00007804945,0.000038718837,0.006565514],"genre_scores_gemma":[0.99745375,0.00044437408,0.0016789417,0.00002858014,0.000037720063,0.000013369003,0.00007859895,0.000008624485,0.00025601915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987147,0.00048738558,0.00020325469,0.00013280765,0.0002610255,0.00020092733],"domain_scores_gemma":[0.9973797,0.0011637463,0.00044837437,0.00024996285,0.00049797876,0.00026026898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027136342,0.0003008701,0.00032816883,0.0037090657,0.0006682994,0.0016949187,0.00067112973,0.0006386318,0.00071963726],"category_scores_gemma":[0.0051913033,0.00031573506,0.00030847744,0.0017140892,0.001969701,0.0013926155,0.00101824,0.00080778374,0.00022125516],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011414704,0.00007507999,0.8846966,0.00022886804,0.0000561402,0.0077740774,0.0016654786,0.0005760874,0.065524,0.0062776743,0.00031754703,0.031666942],"study_design_scores_gemma":[0.000040058163,0.00040993842,0.85961837,0.00011368732,0.00022137171,0.08946833,0.0045500654,0.0040832954,0.024968749,0.006587491,0.009861537,0.00007714023],"about_ca_topic_score_codex":0.0008198961,"about_ca_topic_score_gemma":0.00103822,"teacher_disagreement_score":0.0037090657,"about_ca_system_score_codex":0.00066449353,"about_ca_system_score_gemma":0.00056340435,"threshold_uncertainty_score":0.014351249},"labels":[],"label_agreement":null},{"id":"W2073295461","doi":"10.1038/modpathol.3800704","title":"Histopathological alterations in irritable bowel syndrome","year":2006,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Gastrointestinal motility and disorders","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Irritable bowel syndrome; Medicine; Pathology; Enterochromaffin cell; Abnormality; Enteric nervous system; Pathophysiology; Abdominal pain; Functional gastrointestinal disorder; Internal medicine; Psychiatry","score_opus":0.05746091321324174,"score_gpt":0.3270769167247648,"score_spread":0.26961600351152304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073295461","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038398392,0.99802774,0.00022515384,0.00010737623,0.00022408855,0.0000055622577,0.000019916322,0.000009465672,0.0009966969],"genre_scores_gemma":[0.0019309465,0.9962572,0.0003983453,0.0001281307,0.00030096094,0.0000052142063,0.000046291385,0.00000152668,0.0009313399],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998136,0.000027260565,0.000043618715,0.000030432915,0.000067094086,0.000018039056],"domain_scores_gemma":[0.999637,0.00012147857,0.000081900595,0.000012411499,0.00012236249,0.000024804076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037409685,0.0009021324,0.0014645485,0.0042167674,0.0002483307,0.00076335197,0.0008315377,0.00070244446,0.0021265603],"category_scores_gemma":[0.0005481244,0.00032758588,0.0004015375,0.0029947434,0.0005704361,0.0012981131,0.0005392421,0.0006762607,0.0015953137],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086383945,0.000052640826,0.0009592323,0.01526006,0.00008855815,0.0022357965,0.00006332702,0.0003020423,0.0037142558,0.000627877,0.017264338,0.95934546],"study_design_scores_gemma":[0.00003918809,0.00017987385,0.008932542,0.0062577915,0.0005680729,0.036419284,0.00026783496,0.0002619339,0.0024810084,0.001708672,0.942812,0.00007163019],"about_ca_topic_score_codex":0.0010820053,"about_ca_topic_score_gemma":0.0020152195,"teacher_disagreement_score":0.0042167674,"about_ca_system_score_codex":0.000352208,"about_ca_system_score_gemma":0.000705203,"threshold_uncertainty_score":0.0071141124},"labels":[],"label_agreement":null},{"id":"W2073351287","doi":"10.1038/modpathol.3800747","title":"Cellular and molecular mechanisms of abnormal calcification following ischemia–reperfusion injury in human liver transplantation","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Parathyroid Disorders and Treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Bone sialoprotein; Pathology; Osteopontin; Myofibroblast; Calcification; RUNX2; Transplantation; Biology; Cell biology; Osteoblast; Chemistry; Medicine; Osteocalcin; Immunology; Alkaline phosphatase; Fibrosis; Internal medicine; Biochemistry","score_opus":0.010498950075222334,"score_gpt":0.2726564900780326,"score_spread":0.2621575400028103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073351287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97297835,0.01992834,0.003336066,0.00048270205,0.00010521948,0.000049180766,0.0001344146,0.00009295642,0.002892708],"genre_scores_gemma":[0.9965237,0.001943805,0.00044267825,0.000046989415,0.00003798904,0.000020462227,0.00008670373,0.0000049857117,0.0008927358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997712,0.000066590714,0.000020967533,0.000024649826,0.000056207682,0.000060306065],"domain_scores_gemma":[0.99978524,0.000057721198,0.000048929774,0.00004552144,0.00001896422,0.000043569955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045679745,0.0002581191,0.00048571458,0.00082522375,0.0004659218,0.0005868353,0.00038741998,0.0006467063,0.001840171],"category_scores_gemma":[0.00035129924,0.00030177645,0.00036470356,0.0005038458,0.000829181,0.0004799073,0.00039921727,0.0008929865,0.00023154508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052132574,0.00028100022,0.0038689212,0.00041745315,0.00004659921,0.0032330363,0.000478916,0.00023512215,0.9735563,0.002657315,0.00027213772,0.009739796],"study_design_scores_gemma":[0.0005734147,0.00273226,0.089641355,0.000057160887,0.000245042,0.011535778,0.0013755845,0.002437983,0.88033855,0.0042170715,0.006790079,0.00005570533],"about_ca_topic_score_codex":0.00094504893,"about_ca_topic_score_gemma":0.0006805041,"teacher_disagreement_score":0.001840171,"about_ca_system_score_codex":0.00038426917,"about_ca_system_score_gemma":0.0003548649,"threshold_uncertainty_score":0.0061559677},"labels":[],"label_agreement":null},{"id":"W2073355232","doi":"10.1038/modpathol.2014.60","title":"Prognostic significance of lymphatic invasion in lymph node-positive breast carcinoma: findings from a large case series with long-term follow-up using immunohistochemical endothelial marker","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Assiut University; Tenovus; Faculty of Medicine, University of British Columbia","keywords":"Medicine; Univariate analysis; Lymphatic system; Immunohistochemistry; Lymphovascular invasion; Stage (stratigraphy); Pathology; Lymph node; Breast carcinoma; Breast cancer; Internal medicine; Lymphatic vessel; Carcinoma; Oncology; Multivariate analysis; Cancer; Gastroenterology; Metastasis; Biology","score_opus":0.008801138572785597,"score_gpt":0.22741721153037517,"score_spread":0.21861607295758956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073355232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993655,0.00026905956,0.00010942947,0.000009343958,0.0000024936726,0.0000026896512,0.000027755977,0.0000017281205,0.0002119451],"genre_scores_gemma":[0.99969256,0.00011914593,0.000051548654,0.000005116831,0.000008281188,0.0000033739007,0.000055321518,0.0000014554734,0.00006332664],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996817,0.000063179796,0.00004794768,0.00007742441,0.00005655655,0.00007324198],"domain_scores_gemma":[0.99877924,0.0004421545,0.0002945682,0.00019821046,0.00012400607,0.00016174103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006115236,0.00025629535,0.00026162798,0.0009729087,0.00063685613,0.0006223227,0.00032838792,0.00036830266,0.00085296645],"category_scores_gemma":[0.0018525319,0.00021485004,0.0003179765,0.0008990356,0.000706809,0.00064632494,0.00046944726,0.0002835601,0.00021707719],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017124541,0.0000469237,0.98695564,0.000016345017,0.000030579788,0.0064709885,0.00027121702,0.0000574777,0.0028743427,0.00002180482,0.000037775622,0.003045604],"study_design_scores_gemma":[0.0000066921825,0.00022327954,0.9629382,0.000008963281,0.0001303352,0.03370857,0.0008029976,0.0002535574,0.0012902325,0.00006318427,0.00055778085,0.000016192897],"about_ca_topic_score_codex":0.0009199318,"about_ca_topic_score_gemma":0.0012902718,"teacher_disagreement_score":0.0009729087,"about_ca_system_score_codex":0.00022894656,"about_ca_system_score_gemma":0.00022736136,"threshold_uncertainty_score":0.0032340884},"labels":[],"label_agreement":null},{"id":"W2075002506","doi":"10.1097/01.mp.0000019579.30842.96","title":"Kupffer Cell Aggregation and Perivenular Distribution in Steatohepatitis","year":2002,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Columbia College","funders":"","keywords":"Kupffer cell; CD68; Pathology; Steatohepatitis; Immunostaining; Immunohistochemistry; Biology; Macrophage; Pathogenesis; Fatty liver; Medicine; In vitro; Biochemistry","score_opus":0.012550738423806874,"score_gpt":0.21549825327680272,"score_spread":0.20294751485299584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075002506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9857884,0.010394201,0.001598419,0.000058275156,0.000014620803,0.000015421307,0.000024404482,0.000036351965,0.002069999],"genre_scores_gemma":[0.9965407,0.0021037485,0.00077174715,0.000017273831,0.00003063991,0.0000074424306,0.000029231396,0.0000037769169,0.00049537816],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998392,0.00005030192,0.00001891207,0.000029704097,0.00003736581,0.000024539804],"domain_scores_gemma":[0.9998061,0.000033509015,0.00008011571,0.000019682315,0.00002945561,0.000031137446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004936123,0.00018406867,0.00017106663,0.0011534079,0.00021271994,0.00027702548,0.00012905413,0.00023403202,0.0010001403],"category_scores_gemma":[0.00031737593,0.000174729,0.00006739684,0.0005234428,0.0005462538,0.0003218287,0.00032697275,0.00015628607,0.00032172073],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019988315,0.00016182252,0.14797217,0.0007954815,0.000077369215,0.021591833,0.0008726166,0.00035241924,0.786293,0.0017483917,0.00036685646,0.037769206],"study_design_scores_gemma":[0.00014187512,0.0011456049,0.7030111,0.00014107235,0.0001808624,0.1128449,0.0009229424,0.0028048938,0.16359933,0.0028687182,0.012299236,0.00003958255],"about_ca_topic_score_codex":0.00024835297,"about_ca_topic_score_gemma":0.00029229125,"teacher_disagreement_score":0.0011534079,"about_ca_system_score_codex":0.0001590858,"about_ca_system_score_gemma":0.000104021114,"threshold_uncertainty_score":0.0033457875},"labels":[],"label_agreement":null},{"id":"W2075326357","doi":"10.1038/modpathol.3800674","title":"Positional expression profiling indicates candidate genes in deletion hotspots of hepatocellular carcinoma","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ferroptosis and cancer prognosis","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Hepatocellular carcinoma; Biology; Candidate gene; Gene; Molecular biology; Microarray; Carcinogenesis; Gene expression profiling; Genetics; Cancer research; Pathology; Gene expression; Medicine","score_opus":0.014376337623635172,"score_gpt":0.2459393213108217,"score_spread":0.23156298368718653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075326357","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998024,0.00025091058,0.0010647638,0.000028285915,0.000003477109,0.0000035935313,0.00022507228,0.000015309965,0.0003846343],"genre_scores_gemma":[0.99825734,0.00009970954,0.0006057398,0.000010995357,0.000003671467,0.00000488821,0.0003508017,0.0000065604518,0.000660378],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99991,0.000011964677,0.0000055372057,0.000021448304,0.00002308461,0.00002796479],"domain_scores_gemma":[0.9998447,0.00007060486,0.000025368274,0.000015245597,0.000016631813,0.000027434957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011542069,0.000117261676,0.00023659375,0.00073828606,0.00024258206,0.000238006,0.00019822294,0.00016736747,0.0017268586],"category_scores_gemma":[0.00020170205,0.00014607623,0.00014671893,0.000440597,0.00016870938,0.000100162135,0.00014016875,0.00018614286,0.00027560923],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063122815,0.000015361433,0.012632933,0.000016960572,0.000012933377,0.00026347188,0.00006530946,0.00010762916,0.9838123,0.00014416527,0.000049397142,0.0022485207],"study_design_scores_gemma":[0.000039273356,0.00030099254,0.46502388,0.0000061024466,0.000121978315,0.0028411716,0.0003517741,0.002853463,0.5259428,0.0002826258,0.0022209007,0.000014970551],"about_ca_topic_score_codex":0.0010010197,"about_ca_topic_score_gemma":0.0016678998,"teacher_disagreement_score":0.0017268586,"about_ca_system_score_codex":0.00013365316,"about_ca_system_score_gemma":0.00010832273,"threshold_uncertainty_score":0.005776942},"labels":[],"label_agreement":null},{"id":"W2075664235","doi":"10.1038/modpathol.2015.38","title":"An international study to increase concordance in Ki67 scoring","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Traditional Chinese Medicine Studies","field":"Medicine","cited_by":216,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Juravinski Hospital; McMaster University; Ontario Institute for Cancer Research; University of British Columbia","funders":"National Institute for Health and Care Research; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; Government of Ontario; Breast Cancer Research Foundation; Pfizer; Ontario Institute for Cancer Research; Cure Brain Cancer Foundation; Eli Lilly and Company","keywords":"Concordance; Medicine; Pathology; Medical physics; Internal medicine","score_opus":0.06074518772564819,"score_gpt":0.36657884142553865,"score_spread":0.30583365369989046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075664235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93844795,0.008985361,0.0068345126,0.0019538573,0.00069780333,0.0010407373,0.0011498799,0.000059289072,0.040830545],"genre_scores_gemma":[0.9910953,0.0013881206,0.0043432545,0.0005700335,0.00016800864,0.00034862885,0.0006581686,0.000035638106,0.0013928944],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9864335,0.007684824,0.0025189517,0.0011308905,0.0017011068,0.0005307435],"domain_scores_gemma":[0.9586185,0.015309462,0.0048083677,0.0042551053,0.015690755,0.0013177503],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.020333266,0.00042441709,0.0006464484,0.0032341671,0.0014434651,0.0015040246,0.00067966996,0.0005993399,0.0043502934],"category_scores_gemma":[0.040524736,0.00032480012,0.0006692315,0.0043955445,0.0008666022,0.0013191986,0.0018903472,0.0007588088,0.00063503993],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010924756,0.00047367392,0.92372435,0.0014239221,0.00066930405,0.00060120976,0.0070712967,0.00007467566,0.002838196,0.0013745164,0.0026754322,0.057980947],"study_design_scores_gemma":[0.0003656717,0.0012056889,0.94253236,0.0015721542,0.0023163848,0.0026855876,0.008310785,0.0004113732,0.0048367097,0.0008151085,0.034897584,0.0000505206],"about_ca_topic_score_codex":0.0031777055,"about_ca_topic_score_gemma":0.0063827145,"teacher_disagreement_score":0.9796667,"about_ca_system_score_codex":0.00084075995,"about_ca_system_score_gemma":0.0022301823,"threshold_uncertainty_score":0.10753387},"labels":[],"label_agreement":null},{"id":"W2076046704","doi":"10.1038/modpathol.2009.163","title":"Expression of CD133+ cancer stem cells in childhood malignant melanoma and its correlation with metastasis","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Melanoma; Medicine; Pathology; Metastasis; Cancer stem cell; Cancer; Immunostaining; Lymph node; Immunohistochemistry; Cancer research; Internal medicine","score_opus":0.013427192011123378,"score_gpt":0.24568207473939244,"score_spread":0.23225488272826905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076046704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764544,0.0007757301,0.00022439504,0.00002364369,0.0000026208531,0.0000039555703,0.00007957343,0.000011291629,0.001233257],"genre_scores_gemma":[0.9990723,0.00033220786,0.00021743713,0.0000051972916,0.00000389729,0.000003806679,0.0000804767,0.0000026760915,0.00028202424],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999894,0.000018464028,0.000011466435,0.000013337754,0.000029059995,0.00003358372],"domain_scores_gemma":[0.9996885,0.00009453943,0.000093818744,0.000016986038,0.000050312858,0.00005595819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019324136,0.00008012796,0.00014033365,0.0011574158,0.00023619458,0.00038689238,0.0001199349,0.0001700938,0.0012147132],"category_scores_gemma":[0.00043858498,0.00012665585,0.00009276566,0.0006273124,0.00029009668,0.00019929465,0.00016506892,0.00022757784,0.0001436345],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011940595,0.000082866914,0.6898245,0.00012341436,0.000050887844,0.0052973637,0.0006272737,0.00041277634,0.2769465,0.0014773661,0.00044013502,0.023522887],"study_design_scores_gemma":[0.000014885686,0.00024004791,0.91572315,0.00001313552,0.00007770647,0.014120171,0.0008080402,0.0012080566,0.06364202,0.0003706841,0.0037712043,0.000010903904],"about_ca_topic_score_codex":0.0024480168,"about_ca_topic_score_gemma":0.0026464753,"teacher_disagreement_score":0.0024480168,"about_ca_system_score_codex":0.00032776673,"about_ca_system_score_gemma":0.00031364604,"threshold_uncertainty_score":0.0048675537},"labels":[],"label_agreement":null},{"id":"W2076669363","doi":"10.1038/modpathol.2013.153","title":"Distinguishing luminal breast cancer subtypes by Ki67, progesterone receptor or TP53 status provides prognostic information","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; University Health Network","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research","keywords":"Progesterone receptor; Internal medicine; Proportional hazards model; Breast cancer; Oncology; Medicine; Estrogen receptor; Univariate analysis; Lymph node; Multivariate analysis; Cancer; Pathology","score_opus":0.0072659895049337914,"score_gpt":0.23485291674523617,"score_spread":0.22758692724030238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076669363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97535443,0.013157285,0.003398597,0.0006616681,0.00012256618,0.000029846133,0.00051723246,0.00004901359,0.006709457],"genre_scores_gemma":[0.99247885,0.0039039452,0.0016906284,0.00010659873,0.00011636118,0.000013427947,0.00042648969,0.000009147611,0.0012544747],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998381,0.00005062749,0.000018253884,0.000025567706,0.000037638445,0.000029712168],"domain_scores_gemma":[0.9996431,0.00014218986,0.000066642984,0.000048518865,0.00006365604,0.000035942045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000744336,0.00032286716,0.00040170745,0.0011134741,0.00029377308,0.00068232144,0.00019632204,0.00028805912,0.0022893755],"category_scores_gemma":[0.00086288975,0.00012824251,0.00017755355,0.00075976073,0.000341609,0.00047041257,0.00017564355,0.0004053403,0.0005832112],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025431414,0.00022611099,0.6801592,0.00033284,0.00012025625,0.00046559406,0.00021706571,0.00026792564,0.1429532,0.0008530752,0.0008342978,0.17102732],"study_design_scores_gemma":[0.00008135063,0.0011947298,0.8872093,0.00009748222,0.00059554545,0.0043378416,0.0008763817,0.0012165748,0.088338986,0.0034971603,0.012525383,0.000029316541],"about_ca_topic_score_codex":0.0006691238,"about_ca_topic_score_gemma":0.0012476726,"teacher_disagreement_score":0.0022893755,"about_ca_system_score_codex":0.00019738762,"about_ca_system_score_gemma":0.00027115952,"threshold_uncertainty_score":0.0076587796},"labels":[],"label_agreement":null},{"id":"W2077038168","doi":"10.1038/modpathol.2011.176","title":"ERG immunohistochemistry is not predictive for PSA recurrence, local recurrence or overall survival after radical prostatectomy for prostate cancer","year":2011,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":122,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Center for Translational Molecular Medicine","keywords":"TMPRSS2; Prostate cancer; Medicine; Prostatectomy; Biochemical recurrence; Erg; Tissue microarray; Immunohistochemistry; Prostate; Androgen deprivation therapy; Cancer; Oncology; Prostate-specific antigen; PCA3; Pathology; Internal medicine; Disease","score_opus":0.05097620291100834,"score_gpt":0.34466553532668437,"score_spread":0.293689332415676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077038168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996627,0.0018888122,0.00007002883,0.00013830776,0.000025628222,0.0000020341247,0.00004508389,0.000008462873,0.0011946082],"genre_scores_gemma":[0.999577,0.00015893522,0.000020339885,0.000026681208,0.000009933556,5.6310654e-7,0.000043590884,0.0000016185462,0.00016129158],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99968123,0.00008735154,0.00003021686,0.000028061719,0.000081013015,0.00009206156],"domain_scores_gemma":[0.99818355,0.0007500615,0.0004952521,0.00014666205,0.00016443265,0.00026002133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072782533,0.00021923543,0.0003927016,0.0005562405,0.00023832844,0.00060633395,0.00043615038,0.00056026655,0.0014655914],"category_scores_gemma":[0.0027776263,0.00020036047,0.0004588512,0.00038860552,0.0006000575,0.00058334967,0.0002325234,0.00045669798,0.00032796428],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013677062,0.00007254182,0.97759926,0.000036370373,0.00010977907,0.0009995283,0.000060265706,0.00014945779,0.011978875,0.00004742804,0.00021994868,0.007358858],"study_design_scores_gemma":[0.000008390773,0.0001967395,0.9958918,0.0000071651007,0.00008324097,0.0020279728,0.000101134116,0.00024574666,0.0010360924,0.000086537024,0.00031021918,0.000004875845],"about_ca_topic_score_codex":0.001337152,"about_ca_topic_score_gemma":0.002505673,"teacher_disagreement_score":0.0014655914,"about_ca_system_score_codex":0.0002906132,"about_ca_system_score_gemma":0.00033177232,"threshold_uncertainty_score":0.0049028993},"labels":[],"label_agreement":null},{"id":"W2077594293","doi":"10.1038/modpathol.3880041","title":"Sinusoidal CD30-Positive Large B-Cell Lymphoma: A Morphologic Mimic of Anaplastic Large Cell Lymphoma","year":2000,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Cancer Foundation; University of Alberta","funders":"","keywords":"CD30; Anaplastic large-cell lymphoma; Pathology; Lymphoma; Large cell; Anaplastic lymphoma kinase; Large-cell lymphoma; Lymph node; Immunophenotyping; Medicine; CD20; Null cell; Biology; Antigen; Immunology; Internal medicine; Adenocarcinoma; Cancer; Cell culture","score_opus":0.007816032517773616,"score_gpt":0.22899194487293226,"score_spread":0.22117591235515865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077594293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.971881,0.0024548788,0.0070769587,0.0009445299,0.00010348834,0.00009359526,0.00015252722,0.00021762298,0.017075365],"genre_scores_gemma":[0.99770856,0.00032694387,0.0011453787,0.00010051519,0.00015236497,0.000012051399,0.000038334638,0.000009062444,0.00050671026],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9996939,0.00008321141,0.000039729814,0.000049578368,0.000058286038,0.000075374744],"domain_scores_gemma":[0.99916005,0.0003027168,0.00013832329,0.00011833517,0.00005485292,0.00022571797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003249906,0.0007621138,0.00047832145,0.0015045725,0.000565113,0.00071146863,0.00050045917,0.0014952382,0.0026371516],"category_scores_gemma":[0.0024875232,0.00047664985,0.00028769107,0.0010170678,0.00089365634,0.0012021426,0.00092472695,0.00091697095,0.0015896746],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051580317,0.00007376109,0.042698506,0.00012631636,0.00002346103,0.92379266,0.00020951629,0.00050038955,0.018330501,0.0024467853,0.00088035106,0.010401997],"study_design_scores_gemma":[0.000050628678,0.0001341467,0.014936345,0.000008662627,0.00001719808,0.9794281,0.00010394445,0.0014186489,0.0019997382,0.0011204432,0.00077320385,0.000008882191],"about_ca_topic_score_codex":0.00032829714,"about_ca_topic_score_gemma":0.00036682413,"teacher_disagreement_score":0.0026371516,"about_ca_system_score_codex":0.00036350274,"about_ca_system_score_gemma":0.00019746988,"threshold_uncertainty_score":0.008822143},"labels":[],"label_agreement":null},{"id":"W2080904743","doi":"10.1038/modpathol.3800323","title":"Analysis of human equilibrative nucleoside transporter 1 (hENT1) protein in non-Hodgkin's lymphoma by immunohistochemistry","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Adenosine and Purinergic Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Cancer Foundation","keywords":"Medicine; Lymphoma; Mantle zone; Mantle cell lymphoma; Pathology; Chronic lymphocytic leukemia; Follicular lymphoma; Germinal center; Leukemia; Internal medicine; Oncology; B cell; Immunology; Antibody","score_opus":0.00599142803281945,"score_gpt":0.2500051977967471,"score_spread":0.24401376976392766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080904743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98249555,0.0037931965,0.0081148185,0.00023665371,0.00005507033,0.00003893729,0.00037648834,0.00010918984,0.0047800806],"genre_scores_gemma":[0.9874293,0.0023669817,0.005396911,0.00008210054,0.000028848128,0.00005229184,0.0006396884,0.00003526725,0.003968592],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999275,0.000011661734,0.0000062321074,0.000017383754,0.000013733674,0.00002353395],"domain_scores_gemma":[0.9999324,0.00002229183,0.00001034617,0.000009250908,0.0000132051055,0.000012495654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017222422,0.00018309298,0.00012310148,0.00045371393,0.00030121682,0.00027673275,0.00019842811,0.0002471874,0.0016925049],"category_scores_gemma":[0.00014283239,0.00015312695,0.000160714,0.00019390267,0.00021305303,0.00027871464,0.00014707007,0.00028098386,0.00042051307],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015974791,0.000023250044,0.0018321398,0.000060449518,0.000014134056,0.0005373977,0.000043594668,0.000072130344,0.99423486,0.0004022586,0.00012088214,0.0024991792],"study_design_scores_gemma":[0.000049171995,0.00028664502,0.045163468,0.000019555053,0.0000960397,0.006874864,0.0002685226,0.003426428,0.9303945,0.0006360872,0.012773953,0.000010761841],"about_ca_topic_score_codex":0.0006661348,"about_ca_topic_score_gemma":0.00072001864,"teacher_disagreement_score":0.0016925049,"about_ca_system_score_codex":0.00021532479,"about_ca_system_score_gemma":0.000120606506,"threshold_uncertainty_score":0.0056619644},"labels":[],"label_agreement":null},{"id":"W2081406702","doi":"10.1038/modpathol.2012.95","title":"Reovirus-associated reduction of microRNA-let-7d is related to the increased apoptotic death of cancer cells in clinical samples","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Oncolytics Biotech (Canada)","funders":"National Cancer Institute; Cancer Research UK; Jerry M. Lewis, M.D. Mental Health Research Foundation","keywords":"Apoptosis; Colorectal cancer; Cancer cell; Programmed cell death; Cancer; Ovarian cancer; Biology; Cancer research; Melanoma; Necroptosis; Caspase 3; Tropism; microRNA; Molecular biology; Virology; Pathology; Medicine; Virus; Gene","score_opus":0.07053337819889587,"score_gpt":0.39056612363038323,"score_spread":0.32003274543148735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081406702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949778,0.0019566473,0.0012026154,0.00008005864,0.000057195633,0.000022985358,0.0005272519,0.00005991782,0.0011156995],"genre_scores_gemma":[0.99766123,0.00030852575,0.00088150945,0.000053748685,0.000014857813,0.000022722275,0.0005788351,0.000015748195,0.00046273763],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991297,0.00014463997,0.0001051215,0.00018570776,0.0002869799,0.00014791207],"domain_scores_gemma":[0.99917716,0.00020232283,0.00025537884,0.00008950092,0.0001938047,0.00008183356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041786177,0.00024054422,0.00046291258,0.00087199366,0.00034071412,0.0009276854,0.0002573124,0.0005229668,0.0018249352],"category_scores_gemma":[0.0016363995,0.00021350125,0.00028298836,0.00067524606,0.00038790726,0.00020571121,0.00026590913,0.0006228882,0.0005594613],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004080101,0.00020243764,0.24204896,0.00028012987,0.00020045026,0.0012943516,0.00035613723,0.00018797365,0.7343318,0.000251254,0.0005826549,0.016183678],"study_design_scores_gemma":[0.00005104049,0.0011428494,0.5232614,0.00003977935,0.000224708,0.008087395,0.0005847646,0.0018305683,0.46021378,0.00033439175,0.004195617,0.0000336254],"about_ca_topic_score_codex":0.0005074958,"about_ca_topic_score_gemma":0.00053817715,"teacher_disagreement_score":0.0018249352,"about_ca_system_score_codex":0.00029900795,"about_ca_system_score_gemma":0.00021571523,"threshold_uncertainty_score":0.0061050653},"labels":[],"label_agreement":null},{"id":"W2081547800","doi":"10.1038/modpathol.3800757","title":"Cooperative effect of cell-cycle regulators expression on bladder cancer development and biologic aggressiveness","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":133,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Cystectomy; Lymphovascular invasion; Bladder cancer; Medicine; Urothelium; Lymph node; Biomarker; Tissue microarray; Immunohistochemistry; Carcinoma; Pathology; Concordance; Cancer; Urinary bladder; Oncology; Urology; Internal medicine; Metastasis; Biology","score_opus":0.013622318979627216,"score_gpt":0.2954040238621424,"score_spread":0.28178170488251514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081547800","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915507,0.004152445,0.0009892446,0.0001361481,0.00003934997,0.00001776186,0.00028981152,0.00007978235,0.0027447506],"genre_scores_gemma":[0.99713707,0.00060587394,0.00027051766,0.00003508367,0.000016444374,0.000019173714,0.00018079973,0.000010551725,0.0017245641],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997315,0.000066621236,0.000020020709,0.00006504978,0.000045144217,0.00007168796],"domain_scores_gemma":[0.9994678,0.0001978342,0.0000745905,0.00007109504,0.000057403682,0.00013123453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034056228,0.00021861277,0.0003554166,0.0005337524,0.0002701884,0.0006594964,0.00021393957,0.00017296808,0.0025369544],"category_scores_gemma":[0.00047941852,0.00026001805,0.00017292472,0.00023204433,0.00029522946,0.00034488642,0.00034847402,0.0005725711,0.00035858245],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010370704,0.000079666606,0.004079101,0.00003837176,0.000016497537,0.0000755495,0.000047925056,0.00009756657,0.9900423,0.0004330058,0.00015844383,0.0038944518],"study_design_scores_gemma":[0.00005999883,0.0007424225,0.13654216,0.000010328002,0.000086880595,0.000373967,0.00015767671,0.0016564572,0.855476,0.00033864714,0.004541769,0.0000136393355],"about_ca_topic_score_codex":0.0006191414,"about_ca_topic_score_gemma":0.00096466887,"teacher_disagreement_score":0.0025369544,"about_ca_system_score_codex":0.00036241623,"about_ca_system_score_gemma":0.00049567793,"threshold_uncertainty_score":0.008486927},"labels":[],"label_agreement":null},{"id":"W2081748041","doi":"10.1038/modpathol.2015.43","title":"Refining prognosis and identifying targetable pathways for high-risk endometrial cancer; a TransPORTEC initiative","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":490,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Universitair Medisch Centrum Groningen; University College London; Leids Universitair Medisch Centrum; Academy of Medical Sciences; KWF Kankerbestrijding; National Institute for Health and Care Research","keywords":"Endometrial cancer; Refining (metallurgy); Medicine; Oncology; Cancer; Pathology; Internal medicine","score_opus":0.13322660985992693,"score_gpt":0.3293259180151443,"score_spread":0.1960993081552174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081748041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7703141,0.027682982,0.05409186,0.09336591,0.0011115602,0.0020080684,0.019585986,0.0014553121,0.030384272],"genre_scores_gemma":[0.8527051,0.016148115,0.09607982,0.008192419,0.0006287569,0.0011071094,0.017156927,0.00025460077,0.0077271517],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990783,0.00040168577,0.00007027831,0.00015823888,0.00015312091,0.0001384063],"domain_scores_gemma":[0.9919065,0.0020166566,0.0009791967,0.0008588652,0.002797755,0.0014409652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0072333906,0.0006642773,0.0005341369,0.0018280875,0.0010047772,0.0020840713,0.0011510908,0.0009008195,0.004550762],"category_scores_gemma":[0.009390243,0.0002601621,0.0010507426,0.0015593434,0.00036931035,0.0015875666,0.0029308202,0.0017087237,0.0007022055],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018862595,0.0010714241,0.535371,0.0011535609,0.0007967374,0.00079606485,0.0009563101,0.004186269,0.008063559,0.0052165533,0.028384054,0.41211826],"study_design_scores_gemma":[0.0016416048,0.0043080016,0.6536885,0.0034470933,0.0036275662,0.0028107227,0.007979025,0.030002357,0.02133589,0.032234702,0.2387015,0.00022295192],"about_ca_topic_score_codex":0.017473869,"about_ca_topic_score_gemma":0.031181471,"teacher_disagreement_score":0.017473869,"about_ca_system_score_codex":0.0021847675,"about_ca_system_score_gemma":0.011401165,"threshold_uncertainty_score":0.03825432},"labels":[],"label_agreement":null},{"id":"W2081782457","doi":"10.1038/modpathol.3800498","title":"Eosinophilic esophagitis in adults: distinguishing features from gastroesophageal reflux disease: a study of 41 patients","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Eosinophilic Esophagitis","field":"Medicine","cited_by":229,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; London Health Sciences Centre","funders":"","keywords":"Eosinophilic esophagitis; Dysphagia; Lamina propria; Medicine; Gastroenterology; Eosinophilia; Pathology; Esophagitis; High-power field; Eosinophilic; Eosinophil; Internal medicine; Reflux; Asthma; Disease; Immunohistochemistry; Epithelium; Surgery","score_opus":0.008745715239150168,"score_gpt":0.2579994863286013,"score_spread":0.24925377108945115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081782457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994491,0.00013581087,0.000050714083,0.000011380277,0.000002610456,0.00000888587,0.000056650206,0.0000014610844,0.00028346368],"genre_scores_gemma":[0.9992299,0.00021713738,0.000087021144,0.00003166082,0.00002206116,0.000017065939,0.00022585735,0.0000022711336,0.00016696869],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995726,0.00006874332,0.000064907705,0.00011459246,0.000075289085,0.00010379178],"domain_scores_gemma":[0.9992778,0.00021358783,0.00018112067,0.000050597668,0.00007301799,0.00020400042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037044912,0.00050299335,0.00083100545,0.00096870796,0.001013151,0.00062682113,0.0002929614,0.00071421074,0.0021675713],"category_scores_gemma":[0.0013177884,0.0005079519,0.00042407188,0.001034349,0.0005570445,0.0007680525,0.00062639354,0.00042884448,0.00057061395],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001977464,0.00010312054,0.99474984,0.000012768082,0.000017373486,0.002320573,0.0003160093,0.000018173167,0.0005897329,0.000014294269,0.000048109006,0.0016122477],"study_design_scores_gemma":[0.000020036383,0.0004985208,0.99067104,0.00000701952,0.000028172442,0.0073744715,0.0008807815,0.00006660202,0.00012919008,0.000017083392,0.00029928025,0.00000786308],"about_ca_topic_score_codex":0.000995422,"about_ca_topic_score_gemma":0.0009699594,"teacher_disagreement_score":0.0021675713,"about_ca_system_score_codex":0.00019189733,"about_ca_system_score_gemma":0.00026465158,"threshold_uncertainty_score":0.0072512627},"labels":[],"label_agreement":null},{"id":"W2081813122","doi":"10.1038/modpathol.2013.102","title":"Reproducibility of histological cell type in high-grade endometrial carcinoma","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":215,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of British Columbia; McGill University; University of Calgary; Health Sciences Centre; Calgary Laboratory Services; University of Toronto; Sunnybrook Health Science Centre","funders":"Calgary Laboratory Services","keywords":"Medicine; Serous fluid; Hematopathology; Concordance; Immunohistochemistry; Pathology; CDKN2A; Carcinoma; Clear cell; Clear cell carcinoma; Serous carcinoma; Internal medicine; Cancer; Biology","score_opus":0.04822298874549411,"score_gpt":0.28827525364105194,"score_spread":0.24005226489555784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081813122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98930454,0.0024754154,0.00383298,0.00009598731,0.0001327002,0.000035810004,0.00033575052,0.00005809744,0.0037287865],"genre_scores_gemma":[0.9986241,0.000103433245,0.0006966829,0.000039521718,0.000030969546,0.000009974317,0.00018193586,0.000017150702,0.0002961628],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9882543,0.0056372914,0.0017578606,0.0019155979,0.0018093318,0.00062571187],"domain_scores_gemma":[0.94695246,0.022409508,0.0053162486,0.017149871,0.0072851926,0.0008866792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.014041409,0.00030445476,0.00055425084,0.0020430281,0.0006952732,0.0015312661,0.0010152754,0.0008226744,0.0015851422],"category_scores_gemma":[0.03530896,0.000503096,0.00064971374,0.0011293535,0.0011739172,0.000771481,0.0011568133,0.00051238533,0.0007431595],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072807143,0.000019666488,0.98262537,0.000054379427,0.000253762,0.000099668294,0.0004284796,0.00019523168,0.007299584,0.000122536,0.00012363186,0.008049677],"study_design_scores_gemma":[0.000016260803,0.0002120207,0.986289,0.000027568412,0.00025455322,0.0008805544,0.00044019654,0.0011346319,0.009077385,0.0002937497,0.0013587092,0.000015367727],"about_ca_topic_score_codex":0.0015312377,"about_ca_topic_score_gemma":0.0023535967,"teacher_disagreement_score":0.014041409,"about_ca_system_score_codex":0.00054360775,"about_ca_system_score_gemma":0.00036022876,"threshold_uncertainty_score":0.07425898},"labels":[],"label_agreement":null},{"id":"W2082835065","doi":"10.1038/modpathol.3800605","title":"The impact of pathologist experience on liver transplant biopsy interpretation","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Organ Transplantation Techniques and Outcomes","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Medical diagnosis; Biopsy; Requisition; Second opinion; Anatomical pathology; Pathology","score_opus":0.014293490195791347,"score_gpt":0.3042096926713968,"score_spread":0.28991620247560546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082835065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903868,0.0014741856,0.0009103661,0.0015454337,0.00021194783,0.000019667497,0.00013646977,0.000032683165,0.0052823666],"genre_scores_gemma":[0.9982047,0.0003135069,0.00059916265,0.00029639865,0.00019076529,0.00000909397,0.00007709629,0.000041914645,0.00026739363],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9828251,0.0089500295,0.0018303026,0.00097358425,0.004342502,0.0010785263],"domain_scores_gemma":[0.7671104,0.19280615,0.01631201,0.0034715105,0.013451335,0.0068485765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015925316,0.0003408101,0.00050549296,0.001669301,0.000969996,0.0018254556,0.0007772597,0.0011347478,0.003485014],"category_scores_gemma":[0.11344179,0.00036522688,0.0007751007,0.0011117804,0.00084948033,0.0015056388,0.0012342264,0.0010747382,0.0005681228],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017140384,0.00016430352,0.9560546,0.000091835944,0.00018408583,0.0016777702,0.0015430952,0.0003665849,0.0013378009,0.000105103325,0.0010393839,0.03572134],"study_design_scores_gemma":[0.0000418637,0.0009152059,0.98451656,0.00011411814,0.00027491577,0.006148957,0.0023589286,0.0015858905,0.0019163965,0.00038726788,0.0016855575,0.000054327553],"about_ca_topic_score_codex":0.001419854,"about_ca_topic_score_gemma":0.0055049206,"teacher_disagreement_score":0.015925316,"about_ca_system_score_codex":0.0009999146,"about_ca_system_score_gemma":0.0013406965,"threshold_uncertainty_score":0.08422214},"labels":[],"label_agreement":null},{"id":"W2083462043","doi":"10.1038/modpathol.2008.158","title":"Systemic mastocytosis involving the gastrointestinal tract: clinicopathologic and molecular study of five cases","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto","funders":"","keywords":"Systemic mastocytosis; CD117; Pathology; Medicine; Mast cell; Tryptase; Gastrointestinal tract; Lamina propria; Enteropathy; Duodenum; Eosinophil; Gastroenterology; Internal medicine; Immunology; Biology; CD34; Disease","score_opus":0.02812445613012186,"score_gpt":0.24239330967167136,"score_spread":0.2142688535415495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083462043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99600166,0.0010416453,0.0007277752,0.00009005773,0.000025871776,0.000059262835,0.00006430913,0.000025334739,0.0019640706],"genre_scores_gemma":[0.9989567,0.0002919901,0.00033562386,0.000045463807,0.00004190244,0.000016816668,0.00005756253,0.0000040227355,0.00024986622],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9993548,0.00007106518,0.00008902432,0.00015622184,0.00009239284,0.00023653041],"domain_scores_gemma":[0.99897814,0.00025881533,0.00018013202,0.000107171414,0.00007247183,0.00040319827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052303955,0.0015416067,0.00089117046,0.001972163,0.0017876746,0.0009491647,0.000989461,0.0016028779,0.001926244],"category_scores_gemma":[0.002012808,0.0011669592,0.0010867453,0.0011982545,0.0021325324,0.00070292596,0.0015246368,0.0006241971,0.00048505684],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003635699,0.000286997,0.17202592,0.00014404084,0.000071989554,0.8132925,0.0014259216,0.00024198176,0.005301398,0.0002547857,0.00032975175,0.0062611294],"study_design_scores_gemma":[0.00008081531,0.00075308944,0.15487932,0.000028863224,0.00010306365,0.83983535,0.0008195726,0.00040817584,0.001717051,0.00018464863,0.001156287,0.00003384421],"about_ca_topic_score_codex":0.001205336,"about_ca_topic_score_gemma":0.0012887741,"teacher_disagreement_score":0.001972163,"about_ca_system_score_codex":0.000740909,"about_ca_system_score_gemma":0.00040377915,"threshold_uncertainty_score":0.0064439178},"labels":[],"label_agreement":null},{"id":"W2083706055","doi":"10.1038/modpathol.3800990","title":"Frequent accumulation of nuclear E-cadherin and alterations in the Wnt signaling pathway in esophageal squamous cell carcinomas","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Cancer Institute; Canadian Institutes of Health Research; National Research Foundation","keywords":"Cyclin D1; Wnt signaling pathway; Cancer research; Biology; Pathology; Cadherin; Nuclear localization sequence; Catenin; Cell cycle; Cell; Signal transduction; Cytoplasm; Medicine; Cell biology","score_opus":0.028075709063733044,"score_gpt":0.2723473284888829,"score_spread":0.24427161942514983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083706055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963576,0.0017914237,0.00083295756,0.000035109246,0.000008277777,0.000004120062,0.000104285595,0.00003100041,0.0008351274],"genre_scores_gemma":[0.9986951,0.0005005681,0.0002203032,0.000010347519,0.000011440819,0.0000037425189,0.00009437921,0.000004699169,0.0004595186],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998273,0.000020706815,0.00003188531,0.000031115367,0.000053758075,0.000035176985],"domain_scores_gemma":[0.9996685,0.00006993247,0.00010449253,0.000047130376,0.000053853637,0.000056097542],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021483857,0.00020497994,0.00032654472,0.0017100052,0.0003002818,0.00039028135,0.0001670435,0.0003370977,0.0018230287],"category_scores_gemma":[0.00041404055,0.00024693346,0.00020008365,0.0010413295,0.00038898818,0.00032092028,0.0003190667,0.00019837874,0.00035023838],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011652438,0.00005037381,0.13592492,0.00014678591,0.000094804556,0.012067286,0.00025263088,0.0001371431,0.8362414,0.00036394465,0.00020751382,0.01334789],"study_design_scores_gemma":[0.00003161195,0.0001744647,0.82196474,0.000013521921,0.0001655732,0.04459594,0.00043062275,0.0005635287,0.12869325,0.00033919382,0.0030103356,0.000017179369],"about_ca_topic_score_codex":0.00058885367,"about_ca_topic_score_gemma":0.0009339044,"teacher_disagreement_score":0.0018230287,"about_ca_system_score_codex":0.00018142433,"about_ca_system_score_gemma":0.00018418841,"threshold_uncertainty_score":0.0060986876},"labels":[],"label_agreement":null},{"id":"W2084728801","doi":"10.1038/modpathol.2013.218","title":"Retinoblastoma pathway deregulatory mechanisms determine clinical outcome in high-grade serous ovarian carcinoma","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"Congressionally Directed Medical Research Programs; Princess Margaret Cancer Foundation; U.S. Department of Defense","keywords":"Serous fluid; Serous carcinoma; Retinoblastoma; Debulking; Cyclin D1; Internal medicine; Oncology; Medicine; Cancer research; Subgroup analysis; Biology; Cancer; Ovarian cancer; Cell cycle; Gene; Meta-analysis; Genetics","score_opus":0.03244822877920573,"score_gpt":0.28370843803299034,"score_spread":0.2512602092537846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084728801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985436,0.0006316932,0.00015577546,0.00004067857,0.0000044612057,0.0000049628147,0.00008301752,0.00000850216,0.00052738504],"genre_scores_gemma":[0.9995346,0.00015032318,0.0000602303,0.000010740545,0.0000040784244,0.0000028707561,0.00007410956,0.0000016509895,0.00016147112],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986446,0.000032617612,0.00001251367,0.000020723211,0.000023793427,0.000045823246],"domain_scores_gemma":[0.999613,0.00009488201,0.00014690288,0.00003471697,0.000035098947,0.000075356635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037397438,0.00012418508,0.00022259945,0.0007601355,0.00026667156,0.00067361345,0.00020112532,0.00024410151,0.0015942558],"category_scores_gemma":[0.0007973402,0.0001304001,0.00017061018,0.00064013276,0.0003557559,0.00028718245,0.00032796772,0.00029042765,0.00019759174],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012173122,0.00005908052,0.95345277,0.000040659423,0.000066262895,0.00046574418,0.000145191,0.00025799577,0.031068588,0.00028143084,0.00018210546,0.012762956],"study_design_scores_gemma":[0.000022022865,0.00018949906,0.9895866,0.000008480536,0.00009736164,0.0010897141,0.0004043381,0.00075612264,0.0065088333,0.00045038632,0.00088037754,0.000006131349],"about_ca_topic_score_codex":0.00047165112,"about_ca_topic_score_gemma":0.00074009964,"teacher_disagreement_score":0.0015942558,"about_ca_system_score_codex":0.0002647096,"about_ca_system_score_gemma":0.00027385374,"threshold_uncertainty_score":0.0053333044},"labels":[],"label_agreement":null},{"id":"W2085448923","doi":"10.1038/modpathol.2013.81","title":"Next-generation biobanking of metastases to enable multidimensional molecular profiling in personalized medicine","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Mary's Hospital Centre; Hôpital du Sacré-Cœur de Montréal; Université de Sherbrooke; Université Laval; McGill University Health Centre; Hôpital du Saint-Sacrement; Hôpital Charles-Le Moyne; Hôtel-Dieu de Québec; McGill University; Jewish General Hospital; Quebec - Clinical Research Organization in Cancer","funders":"Canadian Institutes of Health Research; Sanofi; Pfizer","keywords":"Biobank; Context (archaeology); Liquid biopsy; Medicine; Personalized medicine; Computational biology; Pathology; Bioinformatics; Computer science; Cancer; Biology; Internal medicine","score_opus":0.029849843086800505,"score_gpt":0.2698879980468967,"score_spread":0.24003815496009623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085448923","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5201255,0.029279632,0.37444332,0.009506042,0.0008594826,0.00058021914,0.0463043,0.0032476126,0.015653772],"genre_scores_gemma":[0.6791993,0.007621116,0.2702761,0.002098716,0.0006198766,0.00054746453,0.034290068,0.00035256703,0.0049948073],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9994265,0.00014662635,0.000047695263,0.00014456942,0.00015615218,0.00007852984],"domain_scores_gemma":[0.9986234,0.00040703508,0.00017430137,0.0003889733,0.0002497519,0.00015659539],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018813306,0.0004229322,0.0009945541,0.002769763,0.00044384628,0.0017380218,0.00081250945,0.0009787108,0.0034303896],"category_scores_gemma":[0.0028948395,0.0003904447,0.0006188101,0.0018139033,0.00029196794,0.0014223645,0.0015374353,0.0010870643,0.0013106389],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013892704,0.0004038204,0.074437626,0.0008743212,0.0006258299,0.0008563864,0.0004969722,0.012686014,0.6151634,0.019192118,0.02791562,0.24595858],"study_design_scores_gemma":[0.00020652439,0.00069171464,0.18983567,0.0004515969,0.0010790513,0.007056066,0.00079784374,0.11079882,0.35881463,0.06707384,0.26295337,0.00024091174],"about_ca_topic_score_codex":0.0012777001,"about_ca_topic_score_gemma":0.0025971048,"teacher_disagreement_score":0.0034303896,"about_ca_system_score_codex":0.00047993704,"about_ca_system_score_gemma":0.000772909,"threshold_uncertainty_score":0.0114758015},"labels":[],"label_agreement":null},{"id":"W2085579853","doi":"10.1038/modpathol.2009.190","title":"Informatics for practicing anatomical pathologists: marking a new era in pathology practice","year":2010,"lang":"en","type":"review","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; London Health Sciences Centre","funders":"","keywords":"Telepathology; Digital pathology; Informatics; Virtual microscopy; Computer science; Health informatics; Pathology; Data science; Medicine; Medical physics; Telemedicine; Health care; Engineering","score_opus":0.05521905502469059,"score_gpt":0.36946407163475903,"score_spread":0.31424501661006843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085579853","genre_codex":"commentary","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003054128,0.091802366,0.010248929,0.8636022,0.015453697,0.00009040137,0.00008365338,0.00047064523,0.015193956],"genre_scores_gemma":[0.094845,0.28832307,0.10926402,0.43217996,0.054978427,0.0005390702,0.00051568606,0.00066380104,0.018690988],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9719507,0.010427046,0.0024736142,0.002665801,0.010069478,0.0024133145],"domain_scores_gemma":[0.84250325,0.066363215,0.008770828,0.007917419,0.026684033,0.047761243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.041760903,0.0012805851,0.0014325455,0.0053597568,0.0086935405,0.02392789,0.0041946783,0.0200626,0.015265945],"category_scores_gemma":[0.05165205,0.001135084,0.0013963918,0.0054699876,0.020338556,0.04379386,0.02176083,0.03470542,0.008280051],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011317353,0.00039650526,0.0048947693,0.0043813502,0.00002917584,0.0012416418,0.011128307,0.00032198254,0.001663943,0.098208204,0.36795855,0.5096624],"study_design_scores_gemma":[0.000026409583,0.00016185378,0.0051676324,0.0059139407,0.000014749967,0.0019733156,0.008266702,0.0002671828,0.00036232703,0.047292367,0.9304451,0.00010835645],"about_ca_topic_score_codex":0.0032346253,"about_ca_topic_score_gemma":0.0072569526,"teacher_disagreement_score":0.041760903,"about_ca_system_score_codex":0.010789208,"about_ca_system_score_gemma":0.03791831,"threshold_uncertainty_score":0.22085541},"labels":[],"label_agreement":null},{"id":"W2088806119","doi":"10.1038/modpathol.3800694","title":"Differential expression of the novel oncogene, SALL4, in lymphoma, plasma cell myeloma, and acute lymphoblastic leukemia","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Blood Foundation; National Institutes of Health","keywords":"Myeloid leukemia; Myeloid; Leukemia; Cancer research; Haematopoiesis; Biology; CD34; Progenitor cell; Pathology; Stem cell; Immunology; Medicine; Cell biology","score_opus":0.003548218944051635,"score_gpt":0.18900132519076138,"score_spread":0.18545310624670974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088806119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982339,0.00059747294,0.00033517365,0.000046174653,0.000006221148,0.0000032553412,0.0001260154,0.000025625664,0.0006261024],"genre_scores_gemma":[0.99803454,0.00022205398,0.00028274415,0.000024516497,0.000007399321,0.000007104344,0.0003169938,0.000007920444,0.0010966737],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99987125,0.000019736923,0.000009293723,0.000018551276,0.000039194816,0.00004188652],"domain_scores_gemma":[0.99975306,0.000069142436,0.00006248912,0.00002518507,0.000032556054,0.00005759436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017496674,0.00013086436,0.00016496428,0.0011402767,0.00028487487,0.0005459668,0.00020604768,0.0002658047,0.0012998978],"category_scores_gemma":[0.00039354875,0.00020605476,0.0001741472,0.00048681448,0.00045215443,0.00027440183,0.000364495,0.00026657878,0.00036241917],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090161734,0.000030693795,0.02176103,0.000037980473,0.000021960039,0.00073395757,0.0001196844,0.00010034101,0.97268516,0.0004551467,0.00009586319,0.0030565588],"study_design_scores_gemma":[0.00014003423,0.00070524425,0.4541823,0.000015407739,0.00014896505,0.011546293,0.00086984434,0.0023255376,0.52181315,0.0014225756,0.006808173,0.000022416909],"about_ca_topic_score_codex":0.0006712043,"about_ca_topic_score_gemma":0.0006884561,"teacher_disagreement_score":0.0012998978,"about_ca_system_score_codex":0.0004921669,"about_ca_system_score_gemma":0.00026213334,"threshold_uncertainty_score":0.004348576},"labels":[],"label_agreement":null},{"id":"W2088989339","doi":"10.1038/modpathol.2011.183","title":"Morphologic patterns associated with BRCA1 and BRCA2 genotype in ovarian carcinoma","year":2011,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":266,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Cancer Institute","keywords":"Pathology; Germline mutation; Germline; Serous fluid; Biology; Serous carcinoma; Cancer; Pleomorphism (cytology); Carcinoma; Ovarian cancer; Medicine; Cancer research; Oncology; Mutation; Internal medicine; Immunohistochemistry; Genetics","score_opus":0.037954615774464184,"score_gpt":0.23596507041623332,"score_spread":0.19801045464176914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088989339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988275,0.00030895183,0.000087059794,0.000026861955,0.0000033660242,0.0000036041085,0.000041255375,0.0000049683554,0.0006963851],"genre_scores_gemma":[0.9993499,0.00019770431,0.00014455752,0.000014869355,0.000012283322,0.0000038719886,0.000058642716,0.000003821969,0.00021429022],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997693,0.000067687506,0.000034295033,0.000033156084,0.000043602722,0.000051890886],"domain_scores_gemma":[0.99874914,0.00040839834,0.0003990396,0.00008067993,0.00016651636,0.000196149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038342352,0.00015530695,0.00022642402,0.0025917583,0.00036557432,0.0005063426,0.00030466905,0.0003059699,0.0024371417],"category_scores_gemma":[0.0021991408,0.00024829424,0.00017357623,0.001072339,0.00047771583,0.0004416664,0.00043469886,0.0002371473,0.00035842723],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008525366,0.000039249942,0.98015964,0.000023151328,0.000026954205,0.003585594,0.00012220732,0.00012307936,0.0091122445,0.000097243996,0.0001026828,0.0057554613],"study_design_scores_gemma":[0.000009621129,0.00009946659,0.9859876,0.0000057495545,0.000026385673,0.011629299,0.00041060857,0.00026714362,0.0011150219,0.00012547127,0.00031761418,0.000006020834],"about_ca_topic_score_codex":0.0009194043,"about_ca_topic_score_gemma":0.00130965,"teacher_disagreement_score":0.0025917583,"about_ca_system_score_codex":0.00024378448,"about_ca_system_score_gemma":0.00021314305,"threshold_uncertainty_score":0.008153081},"labels":[],"label_agreement":null},{"id":"W2091114785","doi":"10.1038/modpathol.3800149","title":"Nonspecific interstitial pneumonia and usual interstitial pneumonia with mutation in surfactant protein C in familial pulmonary fibrosis","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Usual interstitial pneumonia; Surfactant protein C; Idiopathic interstitial pneumonia; Interstitial lung disease; Idiopathic pulmonary fibrosis; Pneumonia; Pathology; Medicine; Lung; Diffuse alveolar damage; Pulmonary fibrosis; Fibrosis; Internal medicine","score_opus":0.008358353178495708,"score_gpt":0.23161467623537557,"score_spread":0.22325632305687987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091114785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98937106,0.0036825591,0.0010507284,0.00045221765,0.00009946631,0.000031174062,0.00010968583,0.000042801756,0.0051603033],"genre_scores_gemma":[0.99784195,0.0005465378,0.00048406812,0.00010719602,0.00030278284,0.000013713686,0.00008355133,0.000008290654,0.00061193865],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99930215,0.00018319637,0.0001567815,0.00012438933,0.00011489046,0.0001186164],"domain_scores_gemma":[0.99808997,0.0009750206,0.00036012588,0.00011006623,0.00013113552,0.00033362338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072875875,0.0012780543,0.00072783884,0.002694911,0.0008545023,0.00044013862,0.00073824736,0.0024071294,0.0027386462],"category_scores_gemma":[0.004456316,0.00049020466,0.00041946393,0.0010419724,0.0022464327,0.0010770438,0.0009080712,0.000521462,0.00046746727],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018610068,0.00012962607,0.20825078,0.0002794348,0.00010130743,0.7630463,0.0008507667,0.00038431413,0.013385513,0.0025823568,0.0012580415,0.007870524],"study_design_scores_gemma":[0.000079944824,0.00024229746,0.104563475,0.0000262419,0.00009817312,0.8898408,0.00029299915,0.00077724084,0.0016641677,0.0014621692,0.0009250967,0.000027368364],"about_ca_topic_score_codex":0.0012932307,"about_ca_topic_score_gemma":0.0014107326,"teacher_disagreement_score":0.0027386462,"about_ca_system_score_codex":0.00037100716,"about_ca_system_score_gemma":0.00034928505,"threshold_uncertainty_score":0.009161711},"labels":[],"label_agreement":null},{"id":"W2091288012","doi":"10.1038/modpathol.3800963","title":"Identification of PCA3 (DD3) in prostatic carcinoma by in situ hybridization","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"DiagnoCure (Canada); Occupational Cancer Research Centre; Université Laval; Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec","funders":"Radboud Universiteit; Johns Hopkins University","keywords":"PCA3; Chromogenic in situ hybridization; Pathology; Prostate cancer; In situ hybridization; Intraepithelial neoplasia; Prostate; Cancer; Chromogenic; Prostatectomy; Medicine; Biology; Chemistry; Internal medicine; Gene expression; Gene","score_opus":0.018901820855485318,"score_gpt":0.3164625971727146,"score_spread":0.29756077631722927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091288012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9670457,0.002923372,0.017393129,0.00056855363,0.00012314794,0.00006392908,0.000699298,0.00028804535,0.010894857],"genre_scores_gemma":[0.9900176,0.0006195409,0.005364383,0.000118953554,0.000036239155,0.000042411524,0.0007245204,0.00003747536,0.0030389442],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99973756,0.00003836175,0.000020917218,0.000062237996,0.000048937705,0.000091827096],"domain_scores_gemma":[0.9997924,0.00007155114,0.000022399108,0.00004070051,0.00003984651,0.000033169534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003073786,0.00024735785,0.0002322916,0.001058144,0.00069824106,0.0006343352,0.00039205654,0.0006095527,0.0032245188],"category_scores_gemma":[0.00042616378,0.00027008745,0.000428424,0.0005250511,0.0005316832,0.00031633253,0.0003667201,0.0007392365,0.000747256],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025651528,0.00002782513,0.0037478642,0.000040954783,0.000013471853,0.0005607735,0.00007483489,0.000060526952,0.9908116,0.0005597201,0.00015687883,0.0036890584],"study_design_scores_gemma":[0.000035970636,0.00024214588,0.044842258,0.000010833281,0.00007676356,0.008953296,0.00037119456,0.0015907561,0.93139035,0.00093822484,0.011534173,0.0000141345445],"about_ca_topic_score_codex":0.0024299994,"about_ca_topic_score_gemma":0.0023459832,"teacher_disagreement_score":0.0032245188,"about_ca_system_score_codex":0.0004686659,"about_ca_system_score_gemma":0.00038386587,"threshold_uncertainty_score":0.010787129},"labels":[],"label_agreement":null},{"id":"W2092934604","doi":"10.1038/modpathol.2014.158","title":"Update for the practicing pathologist: The International Consultation On Urologic Disease-European association of urology consultation on bladder cancer","year":2014,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":121,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Cancer Institute","keywords":"Medicine; Bladder cancer; Grading (engineering); Terminology; Disease; Urine cytology; Gynecology; Pathology; Family medicine; Cancer; Internal medicine","score_opus":0.05791752029981536,"score_gpt":0.36970232288296667,"score_spread":0.31178480258315133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092934604","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016888959,0.94631946,0.00023001316,0.033602912,0.014090766,0.00004238054,0.0004886558,0.000057909263,0.0049989824],"genre_scores_gemma":[0.0015079601,0.9531794,0.0012449734,0.025892153,0.010766823,0.00006796096,0.0010222406,0.000019355704,0.0062991567],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99878246,0.0003426708,0.00022083239,0.00008180966,0.00047610627,0.00009603748],"domain_scores_gemma":[0.9956536,0.0012856489,0.00073419325,0.00005500912,0.0018420004,0.00042945438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020017056,0.00086278206,0.0016893663,0.0054199626,0.0006369113,0.0018818902,0.001524848,0.003967017,0.014688899],"category_scores_gemma":[0.0072252387,0.00050776167,0.0010738459,0.00396307,0.00054182205,0.00240994,0.001885672,0.0033267573,0.0056484477],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034314264,0.000025419173,0.00020723813,0.0066954,0.000038679333,0.00021007372,0.00005760083,0.00005915734,0.00015609505,0.00049083424,0.78373754,0.20828761],"study_design_scores_gemma":[0.000021677435,0.000024086186,0.00092755957,0.011095159,0.00008586782,0.00084813667,0.00008262657,0.00003260303,0.000037809,0.00028623152,0.98654073,0.000017487797],"about_ca_topic_score_codex":0.0077589606,"about_ca_topic_score_gemma":0.026194507,"teacher_disagreement_score":0.014688899,"about_ca_system_score_codex":0.0019307403,"about_ca_system_score_gemma":0.005717072,"threshold_uncertainty_score":0.04913932},"labels":[],"label_agreement":null},{"id":"W2093229695","doi":"10.1038/modpathol.2012.162","title":"PTEN losses exhibit heterogeneity in multifocal prostatic adenocarcinoma and are associated with higher Gleason grade","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Toronto General Hospital; Robarts Clinical Trials; University Health Network; Queen's University","funders":"Ontario Institute for Cancer Research","keywords":"PTEN; TMPRSS2; Prostate cancer; Erg; Fusion gene; Tensin; Prostate; Biology; Tissue microarray; Cancer research; Prostatectomy; Pathology; Fluorescence in situ hybridization; Malignancy; Cancer; Medicine; Chromosome; Gene; Genetics; PI3K/AKT/mTOR pathway; Disease","score_opus":0.0531280467573636,"score_gpt":0.31105702246436423,"score_spread":0.25792897570700063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093229695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986155,0.00039369156,0.0003731994,0.000016160806,0.0000032285384,0.0000034059922,0.00012722652,0.00002405442,0.00044348103],"genre_scores_gemma":[0.99940205,0.00008640718,0.00010234513,0.0000065300637,0.000005189327,0.0000034543525,0.00015605829,0.0000069718108,0.00023090394],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99964476,0.000038297327,0.00002921108,0.00008985186,0.00011808395,0.000079770085],"domain_scores_gemma":[0.99902713,0.00017512997,0.00044945645,0.00008475107,0.00007715451,0.0001863296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003017762,0.00026687476,0.00042439884,0.0026789503,0.00034924928,0.00066375296,0.00042728204,0.00028073858,0.0031947736],"category_scores_gemma":[0.0010434486,0.00029536797,0.00039820565,0.0014254473,0.00038344236,0.00042745273,0.00070017076,0.00027850506,0.00041861148],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020230957,0.00006587688,0.6724856,0.00009197258,0.00045684894,0.0020578457,0.0002927653,0.0004610848,0.30625048,0.0003843634,0.00024591025,0.015184236],"study_design_scores_gemma":[0.000010762402,0.000105301944,0.98929685,0.0000027084,0.00008226288,0.0043830792,0.00012787977,0.00038710632,0.004836882,0.0003112074,0.00044512132,0.000011033071],"about_ca_topic_score_codex":0.0008551874,"about_ca_topic_score_gemma":0.0010889071,"teacher_disagreement_score":0.0031947736,"about_ca_system_score_codex":0.00017839628,"about_ca_system_score_gemma":0.00014284273,"threshold_uncertainty_score":0.01068759},"labels":[],"label_agreement":null},{"id":"W2093877773","doi":"10.1038/modpathol.2014.90","title":"The neuroblastoma and ganglion components of nodular ganglioneuroblastoma are genetically similar: evidence against separate clonal origins","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Hospital for Sick Children","keywords":"Ganglioneuroblastoma; Biology; Neuroblastoma; Ganglioneuroma; Pathology; Neuroblast; Ganglion; In situ hybridization; clone (Java method); Molecular biology; Genetics; Gene; Anatomy; Gene expression; Cell culture; Medicine","score_opus":0.02680014600502133,"score_gpt":0.2829794970855503,"score_spread":0.25617935108052897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093877773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893918,0.0026540179,0.0018592981,0.00016065968,0.000035440513,0.00003698927,0.0001502246,0.000030010813,0.005681674],"genre_scores_gemma":[0.9943663,0.00153425,0.002371896,0.00014051136,0.00004590456,0.00003392666,0.0003287709,0.000020224752,0.0011583844],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994216,0.00014975802,0.00006492118,0.000100722915,0.00017724505,0.00008576725],"domain_scores_gemma":[0.9978611,0.0008153065,0.000505841,0.00036762137,0.00029805856,0.00015207699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008002601,0.00019947847,0.00043277073,0.0010421452,0.0003915738,0.0013003672,0.00072303484,0.0009468817,0.0016739276],"category_scores_gemma":[0.0029180727,0.00029269423,0.0002397079,0.0007388411,0.0011391855,0.0010561167,0.0009628307,0.00080945576,0.00064173253],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025545005,0.00022683802,0.19924395,0.00036990776,0.00016958707,0.01101621,0.0034485247,0.0006427469,0.72101605,0.024035424,0.0004302926,0.036845926],"study_design_scores_gemma":[0.00024021472,0.0010697084,0.7320885,0.00021467671,0.00043605216,0.086601436,0.0047377297,0.0021347678,0.1393707,0.0129126925,0.020089796,0.000103730315],"about_ca_topic_score_codex":0.0012400647,"about_ca_topic_score_gemma":0.001395915,"teacher_disagreement_score":0.0016739276,"about_ca_system_score_codex":0.0004470991,"about_ca_system_score_gemma":0.00038020464,"threshold_uncertainty_score":0.0055998564},"labels":[],"label_agreement":null},{"id":"W2094331477","doi":"10.1038/modpathol.3800168","title":"Correlation between karyotype and quantitative immunophenotype in acute myelogenous leukemia with t(8;21)","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Leukemia & Lymphoma Society of Canada; Vancouver Hospital and Health Sciences Centre; Princess Margaret Cancer Centre","funders":"","keywords":"Immunophenotyping; Leukemia; CD33; CD34; Acute leukemia; Pathology; Cytogenetics; Medicine; Karyotype; Internal medicine; Molecular biology; Immunology; Antigen; Biology; Chromosome; Stem cell; Genetics","score_opus":0.0214004321107668,"score_gpt":0.2913613097337744,"score_spread":0.2699608776230076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094331477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984158,0.00016274325,0.00031231166,0.000050874292,0.0000081629205,0.000004104746,0.00009320529,0.000012068963,0.0009405864],"genre_scores_gemma":[0.9994462,0.000046398087,0.00015151074,0.000017165854,0.000011245173,0.000005135959,0.000090696914,0.0000032775476,0.00022836131],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997396,0.00009323671,0.000021718424,0.000044129312,0.000057110516,0.000044216515],"domain_scores_gemma":[0.9986532,0.0007429467,0.00028910543,0.000070164504,0.00013069337,0.00011392538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034025282,0.00019801986,0.00013746653,0.0008812177,0.00021352831,0.0003007812,0.00021600151,0.00031463406,0.0025034596],"category_scores_gemma":[0.0021504038,0.00014290964,0.000096238604,0.00052329514,0.00032589596,0.00027057898,0.00020298462,0.00032447575,0.00036417617],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013689642,0.000048290447,0.964878,0.0000132256155,0.000033935772,0.0008437375,0.00010485613,0.00017982285,0.026830481,0.00016249,0.00017307533,0.0053630066],"study_design_scores_gemma":[0.000016943279,0.00029928263,0.99122334,0.0000031733568,0.000025108935,0.0032732177,0.00017703287,0.00058251637,0.0036664384,0.00022523942,0.00050179096,0.0000058228197],"about_ca_topic_score_codex":0.00044261554,"about_ca_topic_score_gemma":0.0005084647,"teacher_disagreement_score":0.0025034596,"about_ca_system_score_codex":0.00014375536,"about_ca_system_score_gemma":0.00013584876,"threshold_uncertainty_score":0.00837487},"labels":[],"label_agreement":null},{"id":"W2094670228","doi":"10.1038/modpathol.2013.98","title":"Very well-differentiated gastric carcinoma of intestinal type: analysis of diagnostic criteria","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gastric Cancer Management and Outcomes","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Dalhousie University; Ministry of Education, Culture, Sports, Science and Technology; Royal College of Physicians and Surgeons of Canada","keywords":"Immunophenotyping; Atypia; Pathology; Nuclear atypia; Malignancy; Adenocarcinoma; Medicine; Immunohistochemistry; Cancer; Carcinoma; Hematopathology; Biology; Internal medicine; Antigen; Cytogenetics; Immunology","score_opus":0.020292004333715127,"score_gpt":0.269123452989972,"score_spread":0.24883144865625684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094670228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99644667,0.0007969652,0.00039709095,0.00008681385,0.000016187661,0.000020778692,0.00036494495,0.0000059632584,0.00186469],"genre_scores_gemma":[0.9989699,0.00011286652,0.0004002847,0.000011325742,0.000016529004,0.000010602822,0.00039357427,0.0000039699203,0.00008101206],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989569,0.00024641084,0.00021119011,0.00012617018,0.00025550474,0.000203785],"domain_scores_gemma":[0.99440444,0.0017520536,0.001711575,0.0002794749,0.0010147707,0.00083767984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016554317,0.00037071705,0.0005708242,0.005378937,0.0006135631,0.0009742921,0.0008287059,0.0005296905,0.0019779848],"category_scores_gemma":[0.008054136,0.00019651103,0.0006584354,0.0029725346,0.00066811533,0.0008356248,0.0011332391,0.0004080797,0.00032086583],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020584794,0.000018162647,0.9964929,0.000013091737,0.000034506345,0.00016842401,0.00006589034,0.000053923573,0.0005105148,0.000085756525,0.00009613209,0.0022547825],"study_design_scores_gemma":[0.000017806766,0.00012556667,0.99494886,0.000020054622,0.00008577918,0.0018727223,0.00071682944,0.00089319795,0.00039460603,0.0002905583,0.00062212406,0.000011878458],"about_ca_topic_score_codex":0.0022559317,"about_ca_topic_score_gemma":0.002371859,"teacher_disagreement_score":0.005378937,"about_ca_system_score_codex":0.0007692794,"about_ca_system_score_gemma":0.00085991726,"threshold_uncertainty_score":0.008754849},"labels":[],"label_agreement":null},{"id":"W2095384811","doi":"10.1038/modpathol.2013.238","title":"Optimized immunohistochemical panel to differentiate myeloid sarcoma from blastic plasmacytoid dendritic cell neoplasm","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous lymphoproliferative disorders research","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunohistochemistry; CD33; Pathology; Interleukin-3 receptor; Terminal deoxynucleotidyl transferase; Myeloid; Antigen; Myeloperoxidase; Biology; Plasmacytoid dendritic cell; Leukemia; Medicine; Immunology; CD34; Dendritic cell","score_opus":0.019265419487993027,"score_gpt":0.26799173792243214,"score_spread":0.2487263184344391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095384811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8469423,0.0035880776,0.13215294,0.0005186764,0.0002131809,0.00083751214,0.0011575096,0.0010007394,0.01358907],"genre_scores_gemma":[0.81999916,0.0027062446,0.16461739,0.00044764343,0.000115876406,0.0007178457,0.004865822,0.00018978074,0.0063403],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995091,0.00010133452,0.000063338455,0.00010489358,0.00013263331,0.00008867885],"domain_scores_gemma":[0.9997055,0.000045131725,0.000022721895,0.000041005485,0.00014550745,0.000040098363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006773472,0.0004769383,0.00030568798,0.0011525485,0.00039844395,0.0003821835,0.00038689736,0.00043432444,0.003218578],"category_scores_gemma":[0.00044778382,0.00039975578,0.00035574066,0.00045692726,0.00018073525,0.00038949412,0.0004510732,0.00056937226,0.0010974021],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001217063,0.00005456988,0.004418504,0.00009185744,0.000027632155,0.00028692107,0.0000409532,0.0001569401,0.9836707,0.00029741295,0.0005762521,0.010256464],"study_design_scores_gemma":[0.00009533359,0.0004609572,0.039379716,0.00007275888,0.00041409343,0.008260399,0.0001914493,0.009553337,0.915097,0.0010524262,0.0253844,0.00003808526],"about_ca_topic_score_codex":0.00045029886,"about_ca_topic_score_gemma":0.0012771246,"teacher_disagreement_score":0.003218578,"about_ca_system_score_codex":0.00025338866,"about_ca_system_score_gemma":0.00039463336,"threshold_uncertainty_score":0.010767281},"labels":[],"label_agreement":null},{"id":"W2097704945","doi":"10.1038/modpathol.2010.35","title":"Lobular neoplasia: morphology, biological potential and management in core biopsies","year":2010,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Lobular carcinoma; Pathology; Hematopathology; Medicine; Biopsy; Anatomical pathology; Molecular pathology; Differential diagnosis; Invasive lobular carcinoma; Ductal carcinoma; Breast cancer; Immunohistochemistry; Cancer; Biology; Internal medicine; Invasive ductal carcinoma; Cytogenetics","score_opus":0.060245539659139744,"score_gpt":0.31884303167999045,"score_spread":0.2585974920208507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097704945","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021686628,0.9990565,0.00014219944,0.00009484836,0.00005304784,0.0000031580919,0.00001439122,0.000005011734,0.0004139901],"genre_scores_gemma":[0.0014697908,0.997552,0.00032686853,0.00013667736,0.00016731885,0.000003566583,0.000040957053,0.0000013479753,0.00030149493],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996238,0.000062894134,0.00007211013,0.00007851734,0.00013951653,0.000023125634],"domain_scores_gemma":[0.9991135,0.0004592729,0.00015693065,0.000025112422,0.00019575236,0.00004927636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009365897,0.0009491542,0.001751291,0.0033447915,0.0002070505,0.0009947527,0.0010272851,0.0008385757,0.0015344023],"category_scores_gemma":[0.0015619455,0.0004302447,0.0005320259,0.0030604738,0.0006245572,0.0015005763,0.00064160046,0.0011390788,0.00088129955],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005997041,0.00003485426,0.0011087358,0.0103287455,0.00007463759,0.0004237684,0.000051113904,0.00034306519,0.0012306627,0.00049035036,0.01134836,0.97450566],"study_design_scores_gemma":[0.00003877181,0.00022005291,0.016000759,0.015321139,0.000887596,0.018944304,0.00040012103,0.00046453977,0.0016078142,0.0024545447,0.94357103,0.0000893222],"about_ca_topic_score_codex":0.0017553513,"about_ca_topic_score_gemma":0.0036230367,"teacher_disagreement_score":0.0033447915,"about_ca_system_score_codex":0.000674266,"about_ca_system_score_gemma":0.0011177288,"threshold_uncertainty_score":0.0051330924},"labels":[],"label_agreement":null},{"id":"W2100723992","doi":"10.1038/modpathol.3880372","title":"Defining a Test for HER-2/neu Evaluation in Breast Cancer in the Diagnostic Setting","year":2001,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Concordance; Immunohistochemistry; Breast cancer; Medicine; HER2/neu; Cancer; Gene duplication; Pathology; Oncology; Internal medicine; Gene; Biology","score_opus":0.06017018288462389,"score_gpt":0.4127420588739982,"score_spread":0.3525718759893743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100723992","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6334453,0.059975006,0.16148654,0.068846345,0.003817259,0.00078629487,0.000490593,0.0006284752,0.07052424],"genre_scores_gemma":[0.89278436,0.00682158,0.08679481,0.008862214,0.0019526355,0.0002173737,0.00027293857,0.0001186853,0.00217542],"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99576795,0.0017026451,0.0006463177,0.00027859694,0.0010274067,0.00057706813],"domain_scores_gemma":[0.99194664,0.0037232225,0.00074195577,0.00026085577,0.0023898752,0.00093744916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006905375,0.00094928994,0.0012836374,0.003064987,0.0012747452,0.0041556675,0.0018110229,0.0035703087,0.0015720624],"category_scores_gemma":[0.017332746,0.00048815974,0.0007654298,0.0010096461,0.0031490612,0.0030281418,0.001347019,0.0031992001,0.0010045843],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014528444,0.0011473101,0.61835784,0.0009096966,0.00013641799,0.019618347,0.001435999,0.0016718499,0.047255162,0.024274513,0.015322625,0.26841736],"study_design_scores_gemma":[0.00032267446,0.0069231447,0.35417172,0.004798988,0.0012500427,0.24819559,0.016443314,0.03153949,0.13047291,0.06429007,0.14116654,0.0004255306],"about_ca_topic_score_codex":0.0015075984,"about_ca_topic_score_gemma":0.0015952605,"teacher_disagreement_score":0.006905375,"about_ca_system_score_codex":0.0012404071,"about_ca_system_score_gemma":0.003001298,"threshold_uncertainty_score":0.036519587},"labels":[],"label_agreement":null},{"id":"W2103354988","doi":"10.1038/modpathol.2010.171","title":"The impact of tissue block sampling on the detection of p53 signatures in fallopian tubes from women with BRCA 1 or 2 mutations (BRCA+) and controls","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"National Cancer Institute; Brigham and Women's Hospital","keywords":"Serous fluid; Biology; Block (permutation group theory); Pathology; BRCA mutation; Serous carcinoma; Medicine; Ovarian cancer; Cancer; Genetics; Mathematics","score_opus":0.015016697900275192,"score_gpt":0.29150280902197717,"score_spread":0.27648611112170196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103354988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991873,0.00032985833,0.00011410509,0.000034522556,0.000009396699,0.0000053911785,0.00005174468,0.000002083903,0.00026563974],"genre_scores_gemma":[0.99935156,0.00011049465,0.00012573597,0.00003270389,0.0000078914,0.000005942471,0.0001379727,0.0000030188505,0.0002246498],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989961,0.00042507582,0.000045229688,0.00013355937,0.0002808572,0.00011918267],"domain_scores_gemma":[0.9978416,0.0014358142,0.00026028647,0.00012703253,0.00019764403,0.0001375374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012713452,0.00018302246,0.00031356682,0.00048469586,0.00024687342,0.0005466841,0.00022282009,0.00034871345,0.0010132886],"category_scores_gemma":[0.0058113164,0.0001725752,0.0001527647,0.00018516448,0.00037914503,0.00026021397,0.0003594713,0.0002121328,0.00018716049],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009326329,0.000149234,0.9166061,0.000046946156,0.00013769626,0.00053728314,0.00059523084,0.00023481766,0.055157576,0.00010485173,0.00022019459,0.016883755],"study_design_scores_gemma":[0.00003463854,0.0010359769,0.9881258,0.000008596203,0.00011279627,0.0007617013,0.00036000062,0.00076884107,0.008065053,0.0000715358,0.0006501881,0.000004880977],"about_ca_topic_score_codex":0.003564236,"about_ca_topic_score_gemma":0.0050736736,"teacher_disagreement_score":0.003564236,"about_ca_system_score_codex":0.00035928423,"about_ca_system_score_gemma":0.00025053145,"threshold_uncertainty_score":0.0070869923},"labels":[],"label_agreement":null},{"id":"W2112741722","doi":"10.1038/modpathol.2010.202","title":"Minichromosome maintenance protein 7 as a potential prognostic factor for progression-free survival in high-grade serous carcinomas of the ovary","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; BC Cancer Agency","funders":"National Center for Research Resources; National Institutes of Health; National Cancer Institute; Ovarian Cancer Research Fund","keywords":"Serous fluid; Minichromosome maintenance; Tissue microarray; Biology; Pathology; Ovarian cancer; Concordance; Ovary; Immunohistochemistry; Cancer; Cancer research; Medicine; Bioinformatics; Internal medicine; Proliferating cell nuclear antigen","score_opus":0.016308564708718637,"score_gpt":0.27364259374895067,"score_spread":0.25733402904023206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112741722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808586,0.0013663658,0.00014822217,0.000063615276,0.000009659981,0.000002373139,0.000056759538,0.0000038561307,0.0002632516],"genre_scores_gemma":[0.99943095,0.00021726622,0.00010342939,0.0000104289265,0.000017003247,0.0000016684293,0.00009302899,8.7936144e-7,0.00012517045],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99991727,0.000029973518,0.0000059083754,0.000010862234,0.000019846459,0.000016082717],"domain_scores_gemma":[0.99947685,0.00021889241,0.00014201323,0.000022385462,0.00005096096,0.00008882089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036899428,0.00015061896,0.0002212463,0.0005800635,0.00019398904,0.00040903292,0.00023554037,0.00030353083,0.00081193016],"category_scores_gemma":[0.001028158,0.0001011309,0.00016703061,0.00050667167,0.00024012511,0.00023740451,0.0001988943,0.0003260153,0.00010271765],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017559712,0.00005014691,0.9765436,0.000035177865,0.00007569113,0.00034753195,0.00007425637,0.00018781442,0.0107922675,0.00009222786,0.00021915472,0.009826148],"study_design_scores_gemma":[0.000037939422,0.00036115877,0.9932574,0.000007310724,0.00015229965,0.0011313681,0.00013010204,0.0018522514,0.0022323716,0.00016179547,0.0006695595,0.0000064322535],"about_ca_topic_score_codex":0.0006440311,"about_ca_topic_score_gemma":0.0007818428,"teacher_disagreement_score":0.00081193016,"about_ca_system_score_codex":0.00013921145,"about_ca_system_score_gemma":0.00018247271,"threshold_uncertainty_score":0.0027161837},"labels":[],"label_agreement":null},{"id":"W2112996488","doi":"10.1038/modpathol.3801023","title":"Gene expression profiling identifies p63 as a diagnostic marker for giant cell tumor of the bone","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; University of British Columbia","funders":"Michael Smith Health Research BC; Sanofi","keywords":"Giant-cell tumor of bone; Pathology; Giant cell; Giant Cell Tumors; Tendon sheath; Tissue microarray; Immunohistochemistry; Biology; Differential diagnosis; Gene expression profiling; Aneurysmal bone cyst; Staining; Medicine; Gene expression; Gene; Tendon; Lesion","score_opus":0.02068078045953288,"score_gpt":0.257642148594527,"score_spread":0.23696136813499413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112996488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99628556,0.0013614341,0.0010693491,0.00015837593,0.00001763351,0.000011402838,0.0001771848,0.00001961473,0.0008994287],"genre_scores_gemma":[0.99759585,0.0005416697,0.0010138497,0.00006954789,0.000022225682,0.000009772108,0.00021354659,0.0000056775325,0.0005278073],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998141,0.000022753595,0.000011218991,0.000032079573,0.00006733449,0.000052580577],"domain_scores_gemma":[0.9998209,0.000054634398,0.000040718558,0.000011111375,0.00003653272,0.000035992754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014992314,0.00013795239,0.00032038713,0.00076377287,0.00022923575,0.00044627345,0.000110031004,0.00042676931,0.00052730925],"category_scores_gemma":[0.00038247035,0.00012109107,0.00015726357,0.0006191564,0.00037315086,0.00019562413,0.00015059943,0.00033381107,0.00024262577],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046416177,0.000033542226,0.0104074245,0.000022169443,0.000009456941,0.00046940477,0.000043346794,0.000026474205,0.9849391,0.000043950076,0.000065739536,0.0034752176],"study_design_scores_gemma":[0.00007666806,0.0011873563,0.36975482,0.000016964088,0.00016157981,0.007272652,0.00064530637,0.0022418986,0.6148357,0.0006076542,0.0031808547,0.00001852464],"about_ca_topic_score_codex":0.000628763,"about_ca_topic_score_gemma":0.0008142961,"teacher_disagreement_score":0.00076377287,"about_ca_system_score_codex":0.00020159839,"about_ca_system_score_gemma":0.00019030189,"threshold_uncertainty_score":0.0017640591},"labels":[],"label_agreement":null},{"id":"W2126795725","doi":"10.1038/modpathol.2008.191","title":"Intraepithelial T cells and prognosis in ovarian carcinoma: novel associations with stage, tumor type, and BRCA1 loss","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":286,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency","funders":"National Institutes of Health; National Cancer Institute; Sanofi; BC Cancer Agency; Eli Lilly and Company","keywords":"Tissue microarray; Serous fluid; Ovarian cancer; Medicine; Pathology; CD8; Oncology; Ovarian carcinoma; Immunohistochemistry; Internal medicine; Cancer research; Cancer; Immune system; Immunology","score_opus":0.024004751381416545,"score_gpt":0.24780703574396093,"score_spread":0.22380228436254437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126795725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998963,0.00050959375,0.000104479055,0.00005859984,0.0000052304727,0.000001966432,0.00007728645,0.000004578549,0.00027528557],"genre_scores_gemma":[0.99938035,0.00018896768,0.0001136306,0.000014916937,0.000023138842,0.0000025878473,0.000082367325,0.0000024590504,0.00019160111],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999057,0.000027452728,0.0000097020375,0.000019678868,0.00001725741,0.000020240886],"domain_scores_gemma":[0.99916923,0.00023998324,0.0003507044,0.00005631856,0.000057490175,0.00012630463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002905603,0.00022503044,0.00025298508,0.0005750807,0.0002505331,0.0005002581,0.00024305435,0.00037393835,0.0013333592],"category_scores_gemma":[0.0013887243,0.00014415508,0.0001775302,0.0007168405,0.0002533795,0.0002756355,0.00020020215,0.00038628594,0.00016278405],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009835744,0.000038781916,0.98654836,0.000017097937,0.000060317758,0.00038404227,0.000069993905,0.000108836626,0.0055756033,0.000040186802,0.00012513931,0.0060480884],"study_design_scores_gemma":[0.000020493248,0.00017037633,0.995652,0.0000048543147,0.000090997964,0.0021508418,0.00009669626,0.00042591218,0.0008463787,0.00017560266,0.0003611131,0.000004804564],"about_ca_topic_score_codex":0.00050744356,"about_ca_topic_score_gemma":0.0007313786,"teacher_disagreement_score":0.0013333592,"about_ca_system_score_codex":0.00013363901,"about_ca_system_score_gemma":0.0001456734,"threshold_uncertainty_score":0.0044605136},"labels":[],"label_agreement":null},{"id":"W2130849876","doi":"10.1038/modpathol.3800491","title":"TMA-Combiner, a simple software tool to permit analysis of replicate cores on tissue microarrays","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Michael Smith Health Research BC; National Science Foundation","keywords":"Tissue microarray; Replicate; DNA microarray; Microarray; Computer science; Software; Computational biology; Microarray analysis techniques; Epitope; Bioinformatics; Pathology; Biology; Antibody; Immunohistochemistry; Medicine; Mathematics; Immunology; Genetics; Programming language","score_opus":0.014698872083096252,"score_gpt":0.2878245905353845,"score_spread":0.2731257184522883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130849876","genre_codex":"methods","genre_gemma":"software","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"software","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006057133,0.00035839714,0.66074324,0.00010287736,0.00030073157,0.00036634004,0.009899617,0.31910893,0.0030627148],"genre_scores_gemma":[0.036102094,0.0003177744,0.8685967,0.00046437918,0.00022084602,0.004012123,0.021783115,0.058281902,0.01022102],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99736434,0.00036556993,0.00035346445,0.0007300509,0.00097196014,0.00021454635],"domain_scores_gemma":[0.9967282,0.0012525567,0.00030997908,0.0010085007,0.00050975045,0.00019101448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043160794,0.0036861906,0.0031800491,0.0055690138,0.001172388,0.002928827,0.0034249984,0.0017431488,0.0335465],"category_scores_gemma":[0.005398445,0.0032216068,0.0026946766,0.0031356302,0.0007165536,0.0028026083,0.0023183213,0.0033804323,0.015700392],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002113113,0.0003226014,0.005989737,0.002255946,0.0016823194,0.0006638278,0.00089443644,0.0037958538,0.42544812,0.0067353356,0.25203025,0.29806855],"study_design_scores_gemma":[0.0006214232,0.00042443347,0.0184882,0.00015597961,0.0008050208,0.0027578578,0.00020081646,0.2023374,0.5382632,0.018278748,0.21692765,0.0007391853],"about_ca_topic_score_codex":0.0012171053,"about_ca_topic_score_gemma":0.0023935328,"teacher_disagreement_score":0.0335465,"about_ca_system_score_codex":0.0009444755,"about_ca_system_score_gemma":0.0010079574,"threshold_uncertainty_score":0.11222422},"labels":[],"label_agreement":null},{"id":"W2134632882","doi":"10.1038/modpathol.3800094","title":"The presence of stromal mast cells identifies a subset of invasive breast cancers with a favorable prognosis","year":2004,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":150,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency","funders":"Michael Smith Health Research BC","keywords":"Stromal cell; Immunohistochemistry; Tissue microarray; Pathology; Estrogen receptor; Mast cell; Breast carcinoma; Biology; Medicine; Hematopathology; Hormone receptor; Progesterone receptor; Cancer research; Breast cancer; Internal medicine; Immunology; Cancer","score_opus":0.007762827057626307,"score_gpt":0.19481363164943244,"score_spread":0.18705080459180612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134632882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998804,0.00032857413,0.00018031715,0.000048300284,0.0000065748327,0.0000042931742,0.000085237145,0.0000093382,0.000533422],"genre_scores_gemma":[0.9993068,0.00016460985,0.00013863257,0.000017507753,0.000038478232,0.0000038219173,0.0001559488,0.000002465129,0.00017171129],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99990094,0.000016213877,0.000008341549,0.000018992152,0.000022345126,0.000033196236],"domain_scores_gemma":[0.9996026,0.00008068114,0.0001327923,0.00003289104,0.000043786116,0.00010736879],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018601707,0.0002452425,0.0003107026,0.0006617085,0.000231221,0.0003828977,0.00017425466,0.0002524723,0.0017107651],"category_scores_gemma":[0.00053515326,0.00010064526,0.00013775626,0.00040756864,0.00021526487,0.00022888303,0.00024115232,0.0002381245,0.00034108345],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001022011,0.000053071515,0.88885623,0.000029569097,0.00003349602,0.0030952385,0.00015648335,0.00005618646,0.09553942,0.00011696278,0.00031404666,0.010727271],"study_design_scores_gemma":[0.000013522184,0.0002680056,0.97868216,0.000003888258,0.00004020557,0.015211473,0.00030286665,0.00018322658,0.0043498594,0.00012024431,0.0008195904,0.00000489348],"about_ca_topic_score_codex":0.0001682066,"about_ca_topic_score_gemma":0.00020546738,"teacher_disagreement_score":0.0017107651,"about_ca_system_score_codex":0.0000614569,"about_ca_system_score_gemma":0.0000779599,"threshold_uncertainty_score":0.005723119},"labels":[],"label_agreement":null},{"id":"W2134633113","doi":"10.1038/modpathol.2008.163","title":"Characterization of a novel anti-fatty acid synthase (FASN) antiserum in breast tissue","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer, Lipids, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"Fatty acid synthase; Antiserum; Pathology; Medicine; Fatty acid; Chemistry; Biochemistry; Antibody; Immunology","score_opus":0.012481818648270963,"score_gpt":0.23907380340503553,"score_spread":0.22659198475676456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134633113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9710764,0.0045528794,0.019288518,0.00037236267,0.00020163677,0.00009223878,0.00023894546,0.0001778773,0.0039990633],"genre_scores_gemma":[0.98011214,0.0019230742,0.011447879,0.00024404722,0.00015256596,0.00008565793,0.0011712586,0.000043663345,0.004819672],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980193,0.00003660097,0.000022469543,0.000049259554,0.000037841797,0.000051786683],"domain_scores_gemma":[0.99948466,0.00012553549,0.00005526704,0.00006749474,0.00013193546,0.00013505999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045362633,0.00054597954,0.00027626034,0.00076876197,0.000296744,0.0003684811,0.00042032267,0.00041647462,0.0019625318],"category_scores_gemma":[0.0004856199,0.00026547394,0.00040376515,0.00021707015,0.00029798146,0.00041200948,0.00043688042,0.00070521736,0.000755076],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013166906,0.000040447594,0.00037601663,0.000036304464,0.000007661757,0.00022897779,0.000014162023,0.000021848347,0.9976539,0.00016138078,0.000034705085,0.0012929635],"study_design_scores_gemma":[0.00007880978,0.000916293,0.016664235,0.000024045346,0.000114507246,0.005619469,0.00011264482,0.0023572806,0.96521485,0.0004884755,0.008399233,0.000010114316],"about_ca_topic_score_codex":0.00055039173,"about_ca_topic_score_gemma":0.00050872134,"teacher_disagreement_score":0.0019625318,"about_ca_system_score_codex":0.00043150704,"about_ca_system_score_gemma":0.00032198094,"threshold_uncertainty_score":0.0065653324},"labels":[],"label_agreement":null},{"id":"W2140028786","doi":"10.1038/modpathol.2009.122","title":"A panel of antibodies to determine site of origin and malignancy in smooth muscle tumors","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"National Cancer Institute; BC Cancer Agency","keywords":"Smooth Muscle Tumor; Leiomyosarcoma; Leiomyoma; Pathology; Malignancy; Medicine; Immunohistochemistry; Uterine leiomyoma","score_opus":0.0403940140368499,"score_gpt":0.29379067713016344,"score_spread":0.25339666309331355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140028786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91687876,0.011857554,0.03827505,0.001007302,0.00022780846,0.00044970907,0.00096385775,0.00064795295,0.029692182],"genre_scores_gemma":[0.94778264,0.005962464,0.035084825,0.0008956534,0.00016985908,0.00034323966,0.002743182,0.00009311683,0.0069250246],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99947363,0.00011229207,0.00006854629,0.00011179372,0.000101049714,0.00013280075],"domain_scores_gemma":[0.9990069,0.00033388598,0.00006820909,0.000102405604,0.0003485769,0.0001399345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000999208,0.00061882753,0.0004900586,0.002553079,0.0006168202,0.00045366614,0.00059663324,0.00082479726,0.0049101585],"category_scores_gemma":[0.0010275141,0.0004506052,0.00070460135,0.00068393437,0.00019357644,0.00041146137,0.00054844917,0.00094067305,0.0011966199],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004131622,0.00035101024,0.012914153,0.00019517723,0.00016896821,0.00058148976,0.00009720579,0.000305045,0.94272983,0.0005983512,0.0015626878,0.040082894],"study_design_scores_gemma":[0.00047197743,0.003903289,0.2355192,0.0003948761,0.0011897573,0.018109336,0.00042952603,0.0092360675,0.66301364,0.0024412873,0.06519517,0.00009590165],"about_ca_topic_score_codex":0.001194714,"about_ca_topic_score_gemma":0.0021531128,"teacher_disagreement_score":0.0049101585,"about_ca_system_score_codex":0.00038280265,"about_ca_system_score_gemma":0.00037221235,"threshold_uncertainty_score":0.016426146},"labels":[],"label_agreement":null},{"id":"W2148329056","doi":"10.1038/modpathol.2010.155","title":"International Society of Urological Pathology (ISUP) Consensus Conference on Handling and Staging of Radical Prostatectomy Specimens. Working group 5: surgical margins","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":404,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; McMaster University","funders":"","keywords":"Medicine; Prostatectomy; Surgical margin; Prostate; Grading (engineering); Surgical pathology; Pathology; Surgery; Cancer; Internal medicine; Resection","score_opus":0.033088372474644995,"score_gpt":0.2860041479048701,"score_spread":0.25291577543022514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148329056","genre_codex":"commentary","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04217958,0.20648722,0.18995224,0.335439,0.07402962,0.006359536,0.006493477,0.0023591332,0.13670024],"genre_scores_gemma":[0.15744254,0.12732436,0.50633466,0.0716293,0.02287224,0.00624371,0.025629032,0.0013502808,0.0811739],"study_design_codex":"not_applicable","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.98071057,0.0071886126,0.0033830444,0.0006275885,0.00705467,0.001035523],"domain_scores_gemma":[0.92926085,0.019755172,0.0066333287,0.003530128,0.03592185,0.0048986487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.05622139,0.0012468351,0.0016169271,0.0054916935,0.002589969,0.0024810457,0.0090743415,0.0073817614,0.004181835],"category_scores_gemma":[0.03681411,0.0012414812,0.002821184,0.003646484,0.0038821213,0.0023322538,0.004804761,0.008126,0.0033098452],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027962867,0.0002732867,0.013056127,0.0033556928,0.0001760775,0.00090720825,0.0011277158,0.0015785181,0.005636853,0.0036819577,0.60693944,0.36298752],"study_design_scores_gemma":[0.00009116335,0.00039334054,0.03880339,0.009006901,0.00035355182,0.0035907016,0.00196835,0.0015469764,0.0056552193,0.0057057817,0.9327159,0.00016872043],"about_ca_topic_score_codex":0.01154474,"about_ca_topic_score_gemma":0.026826456,"teacher_disagreement_score":0.05622139,"about_ca_system_score_codex":0.0022337597,"about_ca_system_score_gemma":0.017078007,"threshold_uncertainty_score":0.29733062},"labels":[],"label_agreement":null},{"id":"W2153400655","doi":"10.1038/modpathol.2012.72","title":"Consensus statement on the pathology of IgG4-related disease","year":2012,"lang":"en","type":"review","venue":"Modern Pathology","topic":"IgG4-Related and Inflammatory Diseases","field":"Medicine","cited_by":2577,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Subspecialty; Medicine; IgG4-related disease; Pathology; Disease; Hematopathology; Histopathology; Dermatopathology; Internal medicine","score_opus":0.07522543265445447,"score_gpt":0.33474806109577626,"score_spread":0.2595226284413218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153400655","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020253575,0.96499133,0.0010058047,0.01943807,0.011336993,0.0000477996,0.00025339407,0.000031056785,0.002692921],"genre_scores_gemma":[0.0016135196,0.9745239,0.0025461498,0.010342605,0.006819473,0.0000825024,0.00063608255,0.0000101215,0.0034257565],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99803656,0.00036985448,0.0005337523,0.00023877346,0.0006503746,0.00017081726],"domain_scores_gemma":[0.99435896,0.0018892518,0.0007362376,0.00012569802,0.002455701,0.0004341545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0060647177,0.0013554766,0.0028272779,0.005554872,0.0007488775,0.0023461718,0.0032781402,0.004960529,0.0055813566],"category_scores_gemma":[0.006214091,0.00048175835,0.0020804596,0.0040956596,0.0013390247,0.003514069,0.0026691076,0.0044195196,0.0037454134],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019310703,0.00006227828,0.00047083275,0.03103914,0.00019234483,0.0008702858,0.00016624008,0.000320856,0.0015522005,0.006254324,0.37825072,0.5806277],"study_design_scores_gemma":[0.000045729288,0.000059841586,0.0008913531,0.020774031,0.00031053505,0.002122121,0.00014481672,0.000072284,0.00036507854,0.003314363,0.9718625,0.000037336864],"about_ca_topic_score_codex":0.001902562,"about_ca_topic_score_gemma":0.0027409862,"teacher_disagreement_score":0.0060647177,"about_ca_system_score_codex":0.0017861996,"about_ca_system_score_gemma":0.007978814,"threshold_uncertainty_score":0.032073677},"labels":[],"label_agreement":null},{"id":"W2162560920","doi":"10.1038/modpathol.3800317","title":"Mucin-producing urothelial-type adenocarcinoma of prostate: report of two cases of a rare and diagnostically challenging entity","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Urinary and Genital Oncology Studies","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Credit Valley Hospital; University of Toronto; University Health Network","funders":"","keywords":"Cytokeratin; Adenocarcinoma; Prostate; Prostatectomy; Medicine; Pathology; Urothelium; Urology; Prostatic urethra; Prostatic acid phosphatase; Urinary bladder; Immunohistochemistry; Internal medicine; Cancer","score_opus":0.030951979945589046,"score_gpt":0.30773665023966296,"score_spread":0.2767846702940739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162560920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.964311,0.00725103,0.006737286,0.0038222033,0.0012027744,0.000490043,0.00064475974,0.0003889691,0.015151972],"genre_scores_gemma":[0.9899879,0.0013473228,0.0028122186,0.0010625992,0.0026719298,0.00009449754,0.0002247837,0.000090513604,0.0017083168],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99710876,0.00034065987,0.00035840424,0.0007408984,0.00029230057,0.0011590618],"domain_scores_gemma":[0.98776233,0.004547349,0.0019004086,0.0017933724,0.0006069545,0.0033895525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012135706,0.005879834,0.002985529,0.004585944,0.0056642415,0.004293664,0.0054639108,0.01652806,0.0030314904],"category_scores_gemma":[0.017120725,0.0036178795,0.0031559393,0.003036703,0.0058698026,0.005328186,0.005135502,0.00712381,0.0023829364],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045657154,0.00007774421,0.0022550195,0.000028951681,0.000008838593,0.9961777,0.00015669636,0.000043004995,0.0004516756,0.00012428693,0.00015803004,0.0004724617],"study_design_scores_gemma":[0.000026199485,0.0001387774,0.0051512737,0.000007814426,0.00001873768,0.9934058,0.00018662415,0.00015773092,0.00041405228,0.0001250369,0.000344652,0.000023178938],"about_ca_topic_score_codex":0.0034593411,"about_ca_topic_score_gemma":0.0035445965,"teacher_disagreement_score":0.01652806,"about_ca_system_score_codex":0.0021914577,"about_ca_system_score_gemma":0.0012167877,"threshold_uncertainty_score":0.015900195},"labels":[],"label_agreement":null},{"id":"W2227934581","doi":"10.1038/modpathol.2015.155","title":"Loss of switch/sucrose non-fermenting complex protein expression is associated with dedifferentiation in endometrial carcinomas","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":153,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Calgary Laboratory Services; Ottawa Hospital; Royal Alexandra Hospital; University of Alberta; Vancouver General Hospital; Royal Jubilee Hospital; University of British Columbia","funders":"National Cancer Institute; Alberta Cancer Foundation; Royal Alexandra Hospital Foundation; Cancer Research Society; Calgary Laboratory Services","keywords":"SMARCA4; SMARCB1; Immunohistochemistry; ARID1A; Biology; Cancer research; Pathology; Medicine; Epigenetics; Chromatin remodeling; Mutation; Genetics; Gene","score_opus":0.01727567280712791,"score_gpt":0.24801972510991518,"score_spread":0.23074405230278727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2227934581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985983,0.0005317475,0.00046109137,0.000023092041,0.0000051954544,0.0000037210884,0.00012049149,0.00001535061,0.000240913],"genre_scores_gemma":[0.9989415,0.000244681,0.00023399004,0.000011710029,0.000003313471,0.0000046600553,0.00019621992,0.0000041527587,0.0003596921],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990356,0.000012384395,0.000015801392,0.00001828679,0.000028408433,0.000021529708],"domain_scores_gemma":[0.99962616,0.000057089277,0.00013690123,0.000037643815,0.00004346716,0.00009870175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015814567,0.00015027309,0.0001684843,0.00090060884,0.00018640839,0.0003083366,0.00018594861,0.00021118527,0.0012309396],"category_scores_gemma":[0.00031099125,0.0001594103,0.0001769787,0.0004536562,0.00032970324,0.00014213622,0.00023250718,0.00025387376,0.00022325476],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009661124,0.000036327558,0.051376108,0.000042109936,0.000050219885,0.00081383926,0.000064185486,0.00006525474,0.9435117,0.00015386143,0.000079374084,0.0028408314],"study_design_scores_gemma":[0.000026442745,0.00019428063,0.8005095,0.0000073708093,0.00008109503,0.0047942833,0.00028480147,0.0011405522,0.19066165,0.00019502782,0.0020931864,0.000011822048],"about_ca_topic_score_codex":0.0005439677,"about_ca_topic_score_gemma":0.00039365832,"teacher_disagreement_score":0.0012309396,"about_ca_system_score_codex":0.00014446746,"about_ca_system_score_gemma":0.0001450642,"threshold_uncertainty_score":0.0041178465},"labels":[],"label_agreement":null},{"id":"W2229935667","doi":"10.1038/modpathol.2015.151","title":"Silent subtype 3 pituitary adenomas are not always silent and represent poorly differentiated monomorphous plurihormonal Pit-1 lineage adenomas","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":150,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Pathology; Acromegaly; Corticotropic cell; Pituitary adenoma; Biology; Population; Adenoma; Medicine; Hormone; Internal medicine; Endocrinology; Pituitary gland","score_opus":0.02141500044314809,"score_gpt":0.2395276746853821,"score_spread":0.21811267424223402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2229935667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9711157,0.0048714518,0.004585819,0.00035160172,0.00013067115,0.000061533545,0.0010331912,0.00044453595,0.017405467],"genre_scores_gemma":[0.9934523,0.0008665477,0.0024571007,0.00012398412,0.00010395949,0.000017567576,0.0007692039,0.000116386705,0.002092926],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996909,0.000020895925,0.000024643992,0.00005919459,0.00011889862,0.000085388776],"domain_scores_gemma":[0.9987936,0.0002980359,0.00039139003,0.00018049454,0.00015742624,0.00017901669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034984556,0.000554122,0.00041633175,0.0010331976,0.0005405093,0.0011704214,0.00073150615,0.0007213156,0.0033153803],"category_scores_gemma":[0.0012640113,0.00029742884,0.00037335797,0.00084212865,0.0007333408,0.00077716156,0.0005538661,0.00079522247,0.0016311427],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018086814,0.00007472335,0.3136179,0.0005283589,0.00014179568,0.17688078,0.0019907225,0.0003066237,0.40624648,0.0064514475,0.003723315,0.088229164],"study_design_scores_gemma":[0.000058742433,0.0003202855,0.2553784,0.00010603811,0.00023542214,0.6358912,0.0020132307,0.001114467,0.07145338,0.0058952523,0.027453199,0.000080369064],"about_ca_topic_score_codex":0.0023608261,"about_ca_topic_score_gemma":0.0041835685,"teacher_disagreement_score":0.0033153803,"about_ca_system_score_codex":0.0004559702,"about_ca_system_score_gemma":0.0005958007,"threshold_uncertainty_score":0.0110910535},"labels":[],"label_agreement":null},{"id":"W2242085677","doi":"10.1038/modpathol.2015.10","title":"Cardiovascular Pathology","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cardiac Imaging and Diagnostics","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pathology; Medicine","score_opus":0.031352754649997545,"score_gpt":0.2736457529640404,"score_spread":0.24229299831404288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2242085677","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03733848,0.026903965,0.046250246,0.0126219485,0.0073769256,0.0004450162,0.0017374771,0.003402276,0.86392367],"genre_scores_gemma":[0.3206555,0.02518375,0.043594126,0.01587478,0.019179292,0.00029894238,0.0047365413,0.00078336865,0.5696937],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99967337,0.00004271496,0.000026364705,0.00008219285,0.0001227716,0.000052662697],"domain_scores_gemma":[0.9990495,0.00013621346,0.000061010578,0.0002567593,0.00029916465,0.00019733091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006519694,0.00050498033,0.00026551087,0.0022676964,0.0008557629,0.0014791678,0.00056740706,0.0012087927,0.07192239],"category_scores_gemma":[0.001924505,0.00027506004,0.00044407064,0.0007698723,0.00071952754,0.00067908823,0.0009154846,0.0016480255,0.039530776],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022945192,0.00016487807,0.015796827,0.00045175108,0.00008314367,0.024570992,0.0003819513,0.00020341075,0.030132296,0.02583437,0.27532047,0.6268305],"study_design_scores_gemma":[0.000037202313,0.000099919336,0.018520819,0.00042139567,0.0000620682,0.10095662,0.00016324526,0.00042444162,0.0068662493,0.010734179,0.8616808,0.000033126344],"about_ca_topic_score_codex":0.0005187854,"about_ca_topic_score_gemma":0.00082479406,"teacher_disagreement_score":0.07192239,"about_ca_system_score_codex":0.0004238407,"about_ca_system_score_gemma":0.00081371854,"threshold_uncertainty_score":0.24060434},"labels":[],"label_agreement":null},{"id":"W2290899004","doi":"10.1038/modpathol.2016.52","title":"Multilabel immunofluorescence and antigen reprobing on formalin-fixed paraffin-embedded sections: novel applications for precision pathology diagnosis","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Epitope; Immunostaining; Pathology; Biology; Colocalization; Immunofluorescence; Antigen retrieval; Antigen; Antibody; Immunohistochemistry; Molecular biology; Immunology; Medicine","score_opus":0.06637889645348097,"score_gpt":0.376877385688689,"score_spread":0.31049848923520806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2290899004","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.052565224,0.011193571,0.9256251,0.0006030496,0.00040447104,0.00022621013,0.00022596541,0.0020119422,0.0071444944],"genre_scores_gemma":[0.14412265,0.0082519315,0.8383034,0.00034134585,0.00026682235,0.00037519334,0.00056977576,0.00061924505,0.0071495646],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979971,0.00055252167,0.00015354974,0.000706633,0.00039169416,0.00019846781],"domain_scores_gemma":[0.99719256,0.0009366483,0.00030276825,0.00082977134,0.0005160458,0.0002221942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037182183,0.0015319954,0.0009065225,0.002719534,0.0011539486,0.0019196476,0.0018180963,0.0014844723,0.007576693],"category_scores_gemma":[0.0021005445,0.0017268164,0.000817436,0.001390015,0.0015608602,0.0025413262,0.0014897678,0.0022051465,0.003220731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021576452,0.00005647168,0.0009683756,0.00049473095,0.000052681084,0.00028170669,0.00020476566,0.00014889761,0.94921607,0.0048171957,0.000719496,0.042823732],"study_design_scores_gemma":[0.00007323574,0.00048599794,0.006000544,0.00016560341,0.00029629996,0.004399524,0.0002092501,0.010829364,0.93501806,0.0055889552,0.03683992,0.000093268274],"about_ca_topic_score_codex":0.0006176809,"about_ca_topic_score_gemma":0.0017550497,"teacher_disagreement_score":0.007576693,"about_ca_system_score_codex":0.0006218321,"about_ca_system_score_gemma":0.0009116651,"threshold_uncertainty_score":0.025346577},"labels":[],"label_agreement":null},{"id":"W2291213698","doi":"10.1038/modpathol.2016.49","title":"Disease-specific survival of patients with invasive cribriform and intraductal prostate cancer at diagnostic biopsy","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":231,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Cribriform; Medicine; Pathology; Prostate cancer; Disease; Biopsy; Oncology; Cancer; Radiology; Internal medicine; Carcinoma","score_opus":0.015735848313457996,"score_gpt":0.23289180522501876,"score_spread":0.21715595691156075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2291213698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969388,0.0008475594,0.00015089313,0.00006995194,0.000015176243,0.00000371679,0.00068110164,0.0000100980915,0.001282514],"genre_scores_gemma":[0.99903935,0.00013284132,0.000021804908,0.000020960279,0.000014283434,0.0000015652605,0.000568374,0.0000021957019,0.0001985425],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99975306,0.00003061837,0.000016400525,0.00006400896,0.00003775495,0.000098082826],"domain_scores_gemma":[0.99911577,0.00024113028,0.00022782254,0.000054595395,0.00009963086,0.00026099564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037697464,0.0003051653,0.00045448443,0.0007932905,0.0003231138,0.0007250289,0.00043090098,0.0006530518,0.0018606156],"category_scores_gemma":[0.0020223756,0.00023546875,0.00067216385,0.0007158571,0.00034526983,0.0007683951,0.00052814727,0.00066815957,0.00029109628],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008581548,0.000023662742,0.99301755,0.000019075007,0.000111858004,0.00023802581,0.0000786048,0.0003836345,0.00083197304,0.000063990025,0.00022882599,0.0041446956],"study_design_scores_gemma":[0.000008848242,0.000110568915,0.99810624,0.000005989064,0.00009509555,0.00061352557,0.00012652282,0.0004445187,0.00011715741,0.00010281947,0.000259225,0.000009452325],"about_ca_topic_score_codex":0.005376578,"about_ca_topic_score_gemma":0.0064114165,"teacher_disagreement_score":0.005376578,"about_ca_system_score_codex":0.00050840725,"about_ca_system_score_gemma":0.00034291582,"threshold_uncertainty_score":0.01069057},"labels":[],"label_agreement":null},{"id":"W2298858873","doi":"10.1038/modpathol.2015.147","title":"Prognostic significance of L1CAM expression and its association with mutant p53 expression in high-risk endometrial cancer","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Academy of Medical Sciences; KWF Kankerbestrijding; National Institute for Health and Care Research","keywords":"Endometrial cancer; L1; Immunohistochemistry; Medicine; Internal medicine; Clinical significance; Oncology; Metastasis; Cancer; Cancer research; Pathology","score_opus":0.017831156648491664,"score_gpt":0.2707122180555358,"score_spread":0.25288106140704414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2298858873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987147,0.0005997192,0.00008679266,0.000052550113,0.000008010899,0.0000022558163,0.00006641709,0.0000052727596,0.00046427443],"genre_scores_gemma":[0.99967647,0.000099833574,0.000049028517,0.00000857773,0.00001094501,0.000001650243,0.00004834275,0.0000010282047,0.00010417337],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99977034,0.0000705414,0.00002767522,0.000032723336,0.00003485784,0.000063993466],"domain_scores_gemma":[0.9989335,0.00031354735,0.0003978038,0.000066605084,0.000093222945,0.00019526258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004357782,0.00018238346,0.00024365274,0.0009280956,0.00032460882,0.0006131989,0.00028116928,0.00044649155,0.0015119503],"category_scores_gemma":[0.002231026,0.00018550006,0.00026150228,0.00074470317,0.00039158794,0.00037535574,0.0003036266,0.00044347075,0.00025381133],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039205406,0.000016993596,0.99504626,0.000011305643,0.00003755499,0.0002572166,0.000046118246,0.000057730496,0.0017746,0.000026977375,0.000045881745,0.0022873536],"study_design_scores_gemma":[0.0000076624265,0.00010312155,0.9971693,0.000006222104,0.000060750284,0.0010189833,0.00018858665,0.0005562112,0.0005514201,0.00008763146,0.00024378454,0.000006407773],"about_ca_topic_score_codex":0.00066907017,"about_ca_topic_score_gemma":0.00090207014,"teacher_disagreement_score":0.0015119503,"about_ca_system_score_codex":0.00023701934,"about_ca_system_score_gemma":0.00019260195,"threshold_uncertainty_score":0.0050579906},"labels":[],"label_agreement":null},{"id":"W2333006871","doi":"10.1038/modpathol.2016.67","title":"Newly emerged isolated Del(7q) in patients with prior cytotoxic therapies may not always be associated with therapy-related myeloid neoplasms","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"National Cancer Institute; European Hematology Association","keywords":"clone (Java method); Hematopathology; Medicine; Myeloid; Cytotoxic T cell; Pathology; Internal medicine; Biology; Cytogenetics","score_opus":0.016285385016970987,"score_gpt":0.2491721522021818,"score_spread":0.2328867671852108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333006871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99028414,0.0014701721,0.0008609112,0.00029833685,0.00005657026,0.000020683297,0.00027915987,0.00003580542,0.006694344],"genre_scores_gemma":[0.9980788,0.0005218966,0.0004025914,0.00009749693,0.000072599025,0.0000067605,0.00033294046,0.0000064147184,0.00048040636],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997317,0.00005116492,0.00003239345,0.0000636725,0.000055207838,0.00006588661],"domain_scores_gemma":[0.99857414,0.0005700946,0.0004590243,0.000105452316,0.00015948403,0.00013177229],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027308174,0.00030942174,0.00025204802,0.0014281356,0.000344387,0.00058227894,0.00040211843,0.00057517283,0.0048418883],"category_scores_gemma":[0.002238167,0.00015735568,0.00022935445,0.0006990503,0.0005545375,0.00052303483,0.00037309108,0.00048855075,0.0009038519],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047665223,0.00005435139,0.9425633,0.00008267822,0.000059013684,0.023263417,0.00015543766,0.00019578343,0.013700473,0.00060597283,0.0010098589,0.01783301],"study_design_scores_gemma":[0.000035413723,0.00040256287,0.7901544,0.00007392618,0.00019921236,0.18933022,0.00084940385,0.0010692332,0.0075369943,0.0019709843,0.00835391,0.000023668326],"about_ca_topic_score_codex":0.00045213845,"about_ca_topic_score_gemma":0.00064997195,"teacher_disagreement_score":0.0048418883,"about_ca_system_score_codex":0.00017106337,"about_ca_system_score_gemma":0.000250857,"threshold_uncertainty_score":0.016197741},"labels":[],"label_agreement":null},{"id":"W2341970233","doi":"10.1038/modpathol.2016.58","title":"Reproducibility of the NEPTUNE descriptor-based scoring system on whole-slide images and histologic and ultrastructural digital images","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Rare Diseases Clinical Research Network; National Center for Advancing Translational Sciences; University of Michigan; National Institute of Diabetes and Digestive and Kidney Diseases; Nephcure Foundation","keywords":"Concordance; Kappa; Medicine; Pathology; Cohen's kappa; Computer science; Mathematics; Internal medicine","score_opus":0.015418509670205095,"score_gpt":0.23302217222052835,"score_spread":0.21760366255032326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2341970233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.948982,0.0017146738,0.04213036,0.000095633535,0.00038460898,0.00022579657,0.0010389024,0.0005909377,0.004837089],"genre_scores_gemma":[0.9861056,0.00013369939,0.012200653,0.000036356447,0.000036746682,0.00007570935,0.00066850655,0.0001461386,0.00059653947],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9857604,0.0044170725,0.0019441615,0.003731379,0.0037708203,0.00037623898],"domain_scores_gemma":[0.95194966,0.018221589,0.0039739814,0.009422239,0.015528587,0.0009039644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.021189503,0.0006111559,0.0007583065,0.0027187155,0.0007541174,0.0020396225,0.0009889497,0.0008391924,0.00140813],"category_scores_gemma":[0.0454403,0.00042937585,0.00069209107,0.0012445535,0.0011279038,0.0011133384,0.0014758847,0.0005426751,0.0006650099],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006134803,0.0002222726,0.7336565,0.0009551898,0.0025228749,0.00039693742,0.00233644,0.004437121,0.12204299,0.0011258316,0.0020995226,0.12406947],"study_design_scores_gemma":[0.00009945435,0.00068208727,0.908479,0.000104365216,0.000872988,0.0014178781,0.00070949056,0.03527289,0.04732451,0.000997472,0.003872821,0.00016713276],"about_ca_topic_score_codex":0.002304611,"about_ca_topic_score_gemma":0.0044253436,"teacher_disagreement_score":0.021189503,"about_ca_system_score_codex":0.0007299825,"about_ca_system_score_gemma":0.0005254784,"threshold_uncertainty_score":0.1120621},"labels":[],"label_agreement":null},{"id":"W2343337356","doi":"10.1038/modpathol.2016.74","title":"A systematic comparison of three commercial estrogen receptor assays in a single clinical outcome breast cancer cohort","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Calgary Laboratory Services; Alberta Health Services","funders":"Breast Cancer Society of Canada; Calgary Laboratory Services","keywords":"Medicine; Breast cancer; Oncology; Cohort; Pathology; Estrogen receptor; Internal medicine; Univariate analysis; Concordance; Tamoxifen; Predictive value; Estrogen; Multivariate analysis; Gynecology; Cancer","score_opus":0.18187959293200343,"score_gpt":0.46552209598601646,"score_spread":0.28364250305401306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343337356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96670616,0.028597526,0.002171449,0.00010606754,0.00014102506,0.0001464296,0.0013858184,0.000031253167,0.00071421184],"genre_scores_gemma":[0.9962064,0.0015154547,0.0006378523,0.00014695592,0.000069649745,0.000086021944,0.0011077169,0.000030370986,0.00019952998],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9837593,0.0055111623,0.0025086468,0.0051219473,0.0025137214,0.0005852447],"domain_scores_gemma":[0.9720703,0.013495715,0.005633392,0.005115859,0.003171714,0.0005130431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011397839,0.0009895675,0.0022027253,0.0021197584,0.00061654334,0.0019137238,0.0009562602,0.0011352521,0.0009256401],"category_scores_gemma":[0.029770566,0.0007852632,0.003440392,0.0018877814,0.00093489257,0.0008956865,0.0012544672,0.00064701826,0.00032362988],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010392562,0.00010786681,0.9437824,0.0012921588,0.026894886,0.00021974041,0.00041080857,0.00017235505,0.0028464294,0.00017289074,0.00056613435,0.013141876],"study_design_scores_gemma":[0.0010059795,0.0018964431,0.9559787,0.000387678,0.034856368,0.00093018863,0.00034776714,0.00046217322,0.0012504891,0.00023443208,0.0025943266,0.00005538956],"about_ca_topic_score_codex":0.0030182034,"about_ca_topic_score_gemma":0.0058956305,"teacher_disagreement_score":0.011397839,"about_ca_system_score_codex":0.0009383686,"about_ca_system_score_gemma":0.0012074836,"threshold_uncertainty_score":0.060278237},"labels":[],"label_agreement":null},{"id":"W2375080914","doi":"10.1038/modpathol.2016.86","title":"Pattern-based classification of invasive endocervical adenocarcinoma, depth of invasion measurement and distinction from adenocarcinoma in situ: interobserver variation among gynecologic pathologists","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; University of Ottawa; Toronto East General Hospital; University of Toronto; Ottawa Hospital; Health Sciences Centre","funders":"","keywords":"Concordance; Medicine; Carcinoma in situ; Reproducibility; Adenocarcinoma; Context (archaeology); In situ; Kappa; Pathology; Radiology; Carcinoma; Cancer; Internal medicine; Biology; Statistics","score_opus":0.06695608762277437,"score_gpt":0.2656310758148594,"score_spread":0.198674988192085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2375080914","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99306643,0.00064906414,0.004442781,0.00005954918,0.00006200809,0.000053903943,0.00018474879,0.00004572757,0.0014357931],"genre_scores_gemma":[0.9974734,0.000094069335,0.001960164,0.0000289373,0.000017653996,0.000021658863,0.00016277225,0.000020619309,0.00022067803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9928288,0.0030673763,0.0013559723,0.0010461054,0.0014438382,0.00025791363],"domain_scores_gemma":[0.9722988,0.014408216,0.0038932082,0.0030399465,0.005712615,0.00064727094],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.010516223,0.00034917585,0.00044643664,0.0024628874,0.00046292203,0.0013703124,0.0007028285,0.0007484647,0.000725278],"category_scores_gemma":[0.03485438,0.00034172105,0.00065411377,0.0011487264,0.0005970218,0.0011342636,0.0016428087,0.00052340364,0.00037677184],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005081992,0.000037104262,0.9798242,0.000047039826,0.0003453091,0.000080695645,0.0008282089,0.00035456225,0.0038046197,0.0000727475,0.0002336202,0.013863603],"study_design_scores_gemma":[0.000031192973,0.00019870914,0.9877258,0.000033278484,0.00020140552,0.0011392985,0.0010697122,0.006194061,0.0022712618,0.00030465174,0.00080071995,0.000029992525],"about_ca_topic_score_codex":0.00162692,"about_ca_topic_score_gemma":0.003779627,"teacher_disagreement_score":0.9894838,"about_ca_system_score_codex":0.00046879996,"about_ca_system_score_gemma":0.00039083947,"threshold_uncertainty_score":0.055615783},"labels":[],"label_agreement":null},{"id":"W2385742736","doi":"10.1038/modpathol.2016.88","title":"Analytic validation of a clinical-grade PTEN immunohistochemistry assay in prostate cancer by comparison with PTEN FISH","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"DOD Prostate Cancer Research Program; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Canary Foundation; Congressionally Directed Medical Research Programs; National Cancer Institute; Prostate Cancer Foundation","keywords":"PTEN; Immunohistochemistry; Prostate cancer; Biology; Cancer research; Immunostaining; Pathology; Cancer; Medicine; PI3K/AKT/mTOR pathway; Genetics; Apoptosis","score_opus":0.051964775600334585,"score_gpt":0.4067279610610453,"score_spread":0.35476318546071073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2385742736","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9573697,0.00199022,0.029876249,0.0004310939,0.000094814524,0.00018426136,0.0009064767,0.00036000632,0.008787068],"genre_scores_gemma":[0.99023074,0.00018533529,0.008016892,0.00011366569,0.000029131805,0.000070537804,0.00059536117,0.00003655041,0.00072169566],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9951073,0.0011644132,0.0005392822,0.0012085855,0.0016188694,0.00036159236],"domain_scores_gemma":[0.99371403,0.0022590545,0.0010397523,0.00079930277,0.0018877483,0.00030014914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006517829,0.00067079056,0.00046142837,0.003620285,0.00074694876,0.0015216294,0.0010366208,0.00090605405,0.002806721],"category_scores_gemma":[0.009774507,0.0004706911,0.00053240714,0.0013951993,0.0015731839,0.00083675666,0.001214752,0.0006453859,0.0008999552],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010200109,0.00015890827,0.8176935,0.00019183176,0.00040693977,0.00047754182,0.00035947535,0.0014685201,0.15260205,0.0012013102,0.000548341,0.02387156],"study_design_scores_gemma":[0.000090850124,0.0009774698,0.8130422,0.000059896236,0.0009835155,0.005181646,0.0006881643,0.018806798,0.1492988,0.0020809558,0.008736563,0.000053102183],"about_ca_topic_score_codex":0.0013286802,"about_ca_topic_score_gemma":0.002393649,"teacher_disagreement_score":0.006517829,"about_ca_system_score_codex":0.0006108624,"about_ca_system_score_gemma":0.0006268746,"threshold_uncertainty_score":0.034469962},"labels":[],"label_agreement":null},{"id":"W2395505977","doi":"10.1038/modpathol.2016.90","title":"KCC3 axonopathy: neuropathological features in the central and peripheral nervous system","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Fetal and Pediatric Neurological Disorders","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University; Université de Montréal; University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Hereditary motor and sensory neuropathy; Central nervous system; Agenesis of the corpus callosum; Pathology; Medicine; Hypoplasia; Peripheral nervous system; Autopsy; Atrophy; Neuroscience; Corpus callosum; Peripheral; Nervous system; Neuropathology; Anatomy; Disease; Biology; Internal medicine","score_opus":0.012233334787596138,"score_gpt":0.2214561934993982,"score_spread":0.20922285871180207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395505977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99717075,0.0007792528,0.00034220758,0.000027006807,0.0000034355153,0.000011741984,0.00008857936,0.000032058044,0.0015449423],"genre_scores_gemma":[0.9986726,0.00026935755,0.00052718393,0.000021004062,0.000004679253,0.000006012292,0.000076908174,0.0000067212186,0.00041557476],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999076,0.000012075428,0.0000135235405,0.000021847765,0.00002250134,0.000022482463],"domain_scores_gemma":[0.99974126,0.000048775182,0.00007756642,0.000028614066,0.000037820162,0.00006598118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018277136,0.00047808027,0.00020258091,0.000806522,0.000458715,0.00018350162,0.00015010968,0.00033765688,0.0024498468],"category_scores_gemma":[0.00047760727,0.00013705177,0.00010182957,0.00037215452,0.0007740441,0.00019496829,0.00040176933,0.00027376605,0.0002477579],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091287785,0.00017332136,0.29211912,0.00045409135,0.00009686307,0.18775722,0.0013322871,0.00041263635,0.47626215,0.00064962695,0.0008119582,0.03901786],"study_design_scores_gemma":[0.000039801784,0.0003160773,0.54833,0.00006413188,0.00008320862,0.42613217,0.00031051054,0.00037999562,0.022450266,0.00027318284,0.001592376,0.000028240871],"about_ca_topic_score_codex":0.0036754482,"about_ca_topic_score_gemma":0.0068861637,"teacher_disagreement_score":0.0036754482,"about_ca_system_score_codex":0.00030734256,"about_ca_system_score_gemma":0.00037171433,"threshold_uncertainty_score":0.008195519},"labels":[],"label_agreement":null},{"id":"W2396974738","doi":"10.1038/modpathol.3880296","title":"Conclusion","year":2001,"lang":"en","type":"review","venue":"Modern Pathology","topic":"","field":"","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Pathology; Medicine","score_opus":0.10674129186119256,"score_gpt":0.38696152480008755,"score_spread":0.280220232938895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396974738","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001362254,0.79320395,0.0057971682,0.068282805,0.06040288,0.00010449063,0.0007398413,0.0004953242,0.0696112],"genre_scores_gemma":[0.0170178,0.6959198,0.0065233456,0.10574817,0.037778,0.00017695269,0.0023435995,0.00013643455,0.13435581],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994179,0.000080604244,0.000057923888,0.000120693934,0.0002534397,0.00006949601],"domain_scores_gemma":[0.99863476,0.00023132814,0.00013655888,0.00008974593,0.00074436807,0.0001632492],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011922177,0.0008030801,0.0007651658,0.0015793736,0.00039001636,0.0019368312,0.0014553027,0.0017362481,0.036102075],"category_scores_gemma":[0.0033100576,0.00020348554,0.0005878228,0.0014067481,0.0005415177,0.0026334194,0.0013008794,0.0022226677,0.03065362],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007719698,0.000026255058,0.0006709655,0.0040828134,0.00005125551,0.0010490982,0.000053010535,0.00013840175,0.00075488444,0.0037876414,0.45270512,0.53660333],"study_design_scores_gemma":[0.000015286394,0.000019874285,0.00054061244,0.00148027,0.000038565093,0.0018282572,0.00005090287,0.00002630019,0.00023761838,0.002068665,0.993687,0.000006625769],"about_ca_topic_score_codex":0.0010300365,"about_ca_topic_score_gemma":0.0018322775,"teacher_disagreement_score":0.96389794,"about_ca_system_score_codex":0.00086656166,"about_ca_system_score_gemma":0.002343246,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W2409578170","doi":"10.1038/modpathol.2008.131","title":"Letter to the Editor","year":2008,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Pathology; Medicine; Medical physics","score_opus":0.054108918829823174,"score_gpt":0.3420044143705634,"score_spread":0.28789549554074023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409578170","genre_codex":"commentary","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00066200295,0.0025429847,0.00007448961,0.92575115,0.060126804,0.000013857246,0.000032730404,0.000029682386,0.010766254],"genre_scores_gemma":[0.007466057,0.0017525969,0.00015435985,0.91662675,0.046967123,0.000033091936,0.000023615616,0.000024209652,0.026952153],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983199,0.00053352775,0.000117875396,0.0002635882,0.00046949813,0.00029557722],"domain_scores_gemma":[0.9970673,0.0012676866,0.0001948961,0.00012598629,0.000769069,0.000575141],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019388158,0.00075056707,0.0013858969,0.00075526634,0.0030492623,0.0027539178,0.0015609842,0.031206816,0.009606966],"category_scores_gemma":[0.016833814,0.00057382113,0.0008369205,0.0004466884,0.0015824008,0.0020330807,0.001091215,0.021362847,0.006665571],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037028934,0.000017144512,0.00029400006,0.000027556907,0.000008824431,0.0032340547,0.000062618914,0.00003468698,0.000059459147,0.0012055662,0.99124265,0.0037764632],"study_design_scores_gemma":[0.000079318466,0.000048725684,0.0009462595,0.0002114066,0.000025885296,0.005539503,0.00031519623,0.00026468022,0.00019267743,0.004470246,0.9878671,0.00003903884],"about_ca_topic_score_codex":0.0023158311,"about_ca_topic_score_gemma":0.004032955,"teacher_disagreement_score":0.99039304,"about_ca_system_score_codex":0.0027760922,"about_ca_system_score_gemma":0.0028178096,"threshold_uncertainty_score":0.032138467},"labels":[],"label_agreement":null},{"id":"W2411944304","doi":"10.1038/modpathol.2016.94","title":"Pattern classification of endocervical adenocarcinoma: reproducibility and review of criteria","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto East General Hospital; Juravinski Hospital","funders":"National Cancer Institute","keywords":"Kappa; Concordance; Pathology; Medicine; Classification scheme; Cohen's kappa; Adenocarcinoma; Lymphovascular invasion; Not Otherwise Specified; Radiology; Cancer; Metastasis; Internal medicine; Mathematics; Computer science; Statistics","score_opus":0.06088533185305837,"score_gpt":0.34075783928968006,"score_spread":0.2798725074366217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411944304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48256856,0.36919573,0.10332747,0.008193499,0.0030395242,0.0010860474,0.0034792959,0.00037540417,0.028734425],"genre_scores_gemma":[0.83674437,0.077110946,0.07781229,0.0010986283,0.00080474163,0.00040834802,0.0038256592,0.00027103224,0.0019239923],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.98792565,0.0026847108,0.003406653,0.001688163,0.0040069083,0.0002879512],"domain_scores_gemma":[0.96012455,0.014011469,0.0039266916,0.0030611365,0.018282695,0.0005934408],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.023066103,0.0005846457,0.0016858557,0.011014615,0.0010739748,0.0031626474,0.0034876924,0.0007648443,0.0008572907],"category_scores_gemma":[0.055315062,0.0003773959,0.0014185059,0.0069559915,0.0021364368,0.003170934,0.0019565485,0.0010415263,0.00037619384],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047605758,0.00007646536,0.3654953,0.0031333715,0.0006086054,0.00047607077,0.0016306179,0.000591195,0.0034838405,0.003241407,0.0057407958,0.6150462],"study_design_scores_gemma":[0.0001946106,0.0009890827,0.75176495,0.009472041,0.0041460013,0.028323464,0.009430026,0.0132898465,0.012505741,0.020762762,0.14870423,0.00041726112],"about_ca_topic_score_codex":0.0037979325,"about_ca_topic_score_gemma":0.005302187,"teacher_disagreement_score":0.9769339,"about_ca_system_score_codex":0.0020075631,"about_ca_system_score_gemma":0.003183399,"threshold_uncertainty_score":0.12198669},"labels":[],"label_agreement":null},{"id":"W2468483329","doi":"10.1038/modpathol.2016.109","title":"Standardized evaluation of tumor-infiltrating lymphocytes in breast cancer: results of the ring studies of the international immuno-oncology biomarker working group","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":279,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Vancouver General Hospital; McMaster University","funders":"European Commission","keywords":"Medicine; Breast cancer; Concordance; Intraclass correlation; Internal medicine; Surgical oncology; Oncology; Biomarker; Cancer; Medical physics; Pathology","score_opus":0.06188627006501885,"score_gpt":0.35220671003961046,"score_spread":0.2903204399745916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468483329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9579144,0.015104474,0.016966106,0.00042538147,0.00014144773,0.0009971268,0.0025889263,0.00027528967,0.0055867527],"genre_scores_gemma":[0.98236,0.0018222817,0.010995667,0.00019251104,0.0000895011,0.00048344402,0.0027190954,0.000065709806,0.0012717501],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.98979646,0.0060361265,0.0005064326,0.00094153703,0.0023981768,0.00032120512],"domain_scores_gemma":[0.9900921,0.0029131935,0.001986186,0.001976699,0.0027360357,0.00029585083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0186534,0.00088809984,0.00075186824,0.0020280385,0.0003143801,0.0012661688,0.0013187759,0.00061547424,0.00082417304],"category_scores_gemma":[0.012282215,0.00028366287,0.00066437444,0.00155052,0.0007553153,0.00080985005,0.001316744,0.0007296917,0.00053517905],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014205567,0.001108169,0.68655163,0.00084018,0.0011057378,0.00013491856,0.0011749299,0.0022754832,0.066916324,0.0010892398,0.0031146589,0.22148322],"study_design_scores_gemma":[0.00088391686,0.014546597,0.87408495,0.0001542771,0.0012720108,0.00095806,0.0008473782,0.0034683612,0.08944945,0.00071941235,0.013514529,0.00010111933],"about_ca_topic_score_codex":0.0019369159,"about_ca_topic_score_gemma":0.0011232193,"teacher_disagreement_score":0.0186534,"about_ca_system_score_codex":0.0007093837,"about_ca_system_score_gemma":0.00081186317,"threshold_uncertainty_score":0.0986498},"labels":[],"label_agreement":null},{"id":"W2485905657","doi":"10.1038/modpathol.2016.137","title":"Characterization of FN1–FGFR1 and novel FN1–FGF1 fusion genes in a large series of phosphaturic mesenchymal tumors","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":184,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Royal Alexandra Hospital","funders":"National Taiwan University; National Taiwan University Hospital; Ministry of Science and Technology, Taiwan","keywords":"Mesenchymal stem cell; Fibroblast growth factor receptor 1; Pathology; Cancer research; Fusion gene; Medicine; Biology; Internal medicine; Fibroblast growth factor; Gene; Genetics","score_opus":0.009485217797672819,"score_gpt":0.23542223781183144,"score_spread":0.22593702001415863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2485905657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957009,0.00044223346,0.0020748621,0.000056187975,0.000009909815,0.000040244293,0.00028036765,0.00003484993,0.0013604872],"genre_scores_gemma":[0.99750346,0.00022484057,0.0010172253,0.000023183302,0.000008220068,0.00002559285,0.00048239625,0.000013567059,0.0007015906],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983895,0.000013359475,0.00002220039,0.000038061087,0.000043755434,0.000043685053],"domain_scores_gemma":[0.99971706,0.00011076162,0.000042543226,0.00003312758,0.000035779405,0.00006078979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018686593,0.00027423704,0.0001808742,0.0007898791,0.0003361449,0.00032555652,0.00020205775,0.0002845128,0.0010995457],"category_scores_gemma":[0.0004084926,0.00014025926,0.0002798871,0.0003603823,0.00030430098,0.00020048965,0.00031575162,0.0003012593,0.00026854943],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035426827,0.00006405244,0.008319126,0.000038285663,0.000019978092,0.0085395025,0.00016369954,0.00027426518,0.97697943,0.0004114745,0.0001136914,0.0047221472],"study_design_scores_gemma":[0.00007481546,0.0006695951,0.14148654,0.000010982273,0.00024776792,0.09572,0.00039626064,0.00449138,0.74585307,0.000668409,0.01034914,0.00003202967],"about_ca_topic_score_codex":0.0010934966,"about_ca_topic_score_gemma":0.00086913136,"teacher_disagreement_score":0.0010995457,"about_ca_system_score_codex":0.0003508899,"about_ca_system_score_gemma":0.00020753592,"threshold_uncertainty_score":0.0036783814},"labels":[],"label_agreement":null},{"id":"W2508098025","doi":"10.1038/modpathol.2016.156","title":"Concurrent ARID1A and ARID1B inactivation in endometrial and ovarian dedifferentiated carcinomas","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of British Columbia; Vancouver General Hospital; Calgary Laboratory Services; Royal Alexandra Hospital; University of Alberta","funders":"National Cancer Institute; National Institutes of Health; Canadian Cancer Society Research Institute; Alberta Cancer Foundation; Cancer Research Society; Royal Alexandra Hospital Foundation; Women and Children's Health Research Institute; Children's Health Research Institute; Calgary Laboratory Services","keywords":"ARID1A; Cancer research; Biology; Hematopathology; Carcinoma; Endometrial cancer; Pathology; Cancer; Gene; Medicine; Mutation; Genetics","score_opus":0.01411031940868174,"score_gpt":0.24324727228129375,"score_spread":0.22913695287261202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508098025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99683857,0.0013765923,0.00066330266,0.000032808603,0.0000065895315,0.0000046297223,0.00009224005,0.000011303389,0.0009740229],"genre_scores_gemma":[0.9989237,0.0003308682,0.00023181608,0.000011353401,0.000004075866,0.0000036386516,0.000072380586,0.000002626487,0.00041954117],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99974185,0.000044215773,0.000050725503,0.000050561437,0.0000619155,0.000050627445],"domain_scores_gemma":[0.99958366,0.00011875556,0.00010029494,0.00007746956,0.000054660773,0.00006514209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061209965,0.00016509424,0.00017996776,0.0011902206,0.0002717527,0.00059862883,0.00027253266,0.0002627967,0.0012934654],"category_scores_gemma":[0.00093093765,0.00032121444,0.00017253569,0.00057606323,0.00047971687,0.00032828804,0.0005477324,0.00018058762,0.00021851857],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024716563,0.000047388865,0.24946941,0.00019279077,0.00012257707,0.010773726,0.00062546623,0.00044615704,0.7133485,0.0017730045,0.00016231762,0.020567074],"study_design_scores_gemma":[0.00008903736,0.00030390912,0.6259743,0.000034239274,0.00021022401,0.056728587,0.0017052676,0.0016638472,0.3015707,0.0016110679,0.010081976,0.000026866051],"about_ca_topic_score_codex":0.0004460353,"about_ca_topic_score_gemma":0.0006154094,"teacher_disagreement_score":0.0012934654,"about_ca_system_score_codex":0.00022730025,"about_ca_system_score_gemma":0.00024247984,"threshold_uncertainty_score":0.004326999},"labels":[],"label_agreement":null},{"id":"W2511956909","doi":"10.1038/modpathol.2016.150","title":"In-depth mutational analyses of colorectal neuroendocrine carcinomas with adenoma or adenocarcinoma components","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Medizinischen Fakultät, Ludwig-Maximilians-Universität München","keywords":"KRAS; Adenocarcinoma; Biology; Pathology; Adenoma; Hematopathology; Colorectal cancer; Cancer research; Medicine; Cancer; Cytogenetics; Genetics; Gene","score_opus":0.06730063395556769,"score_gpt":0.3571625402377308,"score_spread":0.28986190628216313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2511956909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966899,0.00084664836,0.00067187246,0.000027154694,0.000006272488,0.000014430141,0.0005692406,0.000020192016,0.0011541627],"genre_scores_gemma":[0.9976025,0.00031623867,0.0008269061,0.000022167786,0.000003920661,0.000007716136,0.0005479244,0.000009550336,0.00066304515],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997049,0.000034862835,0.000032358024,0.000060041428,0.00009411728,0.00007358086],"domain_scores_gemma":[0.9996928,0.00009083574,0.000061260296,0.000039225735,0.00006217802,0.000053718297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003614348,0.00026094116,0.00024869086,0.0015574152,0.00038127953,0.00040685208,0.00019442715,0.00032537503,0.0020322786],"category_scores_gemma":[0.00063166476,0.00018928882,0.00034118688,0.0006519815,0.00019263003,0.00021521191,0.00030719928,0.00020472035,0.00033357757],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007569161,0.000053012445,0.15089513,0.00019444145,0.00019777128,0.0017734682,0.0003091876,0.00040687725,0.83011794,0.00024120799,0.00020611021,0.014847877],"study_design_scores_gemma":[0.000020990814,0.0002983728,0.8014667,0.00003526256,0.00065334025,0.012250259,0.00067232,0.002378028,0.17380963,0.00028827915,0.008108356,0.000018419336],"about_ca_topic_score_codex":0.0013766434,"about_ca_topic_score_gemma":0.0037739144,"teacher_disagreement_score":0.0020322786,"about_ca_system_score_codex":0.00026127326,"about_ca_system_score_gemma":0.00022470305,"threshold_uncertainty_score":0.006798625},"labels":[],"label_agreement":null},{"id":"W2513447495","doi":"10.1038/modpathol.2016.151","title":"Evaluation of three commercial progesterone receptor assays in a single tamoxifen-treated breast cancer cohort","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Calgary Laboratory Services; Alberta Health Services","funders":"Breast Cancer Society of Canada; Calgary Laboratory Services","keywords":"Concordance; Progesterone receptor; Breast cancer; Immunohistochemistry; Medicine; Oncology; Tamoxifen; Pathology; Internal medicine; Cohort; Estrogen receptor; Cancer; Companion diagnostic; Lymph node; Gynecology","score_opus":0.11420820221566332,"score_gpt":0.381436496236264,"score_spread":0.2672282940206007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2513447495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979499,0.00041896736,0.0005641646,0.000066844856,0.000016722932,0.000026544403,0.0003393011,0.000020850224,0.00059675606],"genre_scores_gemma":[0.9983228,0.00012585474,0.00057453715,0.0000403,0.000017147227,0.000021859327,0.00053710415,0.00001554188,0.00034492783],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99705076,0.0006452233,0.00020171268,0.0008438319,0.00095323916,0.00030524618],"domain_scores_gemma":[0.9961605,0.0010977988,0.00065631815,0.0006965162,0.0010274069,0.00036136954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031830554,0.0006177889,0.0006594889,0.0016377011,0.000621407,0.0014339774,0.0007805389,0.0007478352,0.0008844757],"category_scores_gemma":[0.0069347424,0.000498486,0.0007396854,0.00090429076,0.000542821,0.00052452483,0.00082215597,0.00061304757,0.00046714497],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00126121,0.00011017798,0.97992194,0.000020778632,0.00019761294,0.0001834342,0.00032731603,0.000105766616,0.0098004425,0.00006477307,0.00019491045,0.007811593],"study_design_scores_gemma":[0.000051708776,0.0007716943,0.9904062,0.000009353909,0.00028775755,0.00090056146,0.00037363687,0.00081522437,0.00529252,0.000058567406,0.0010165175,0.00001620829],"about_ca_topic_score_codex":0.005258131,"about_ca_topic_score_gemma":0.006356435,"teacher_disagreement_score":0.005258131,"about_ca_system_score_codex":0.0008157304,"about_ca_system_score_gemma":0.0007333757,"threshold_uncertainty_score":0.016833782},"labels":[],"label_agreement":null},{"id":"W2530217932","doi":"10.1038/modpathol.2016.179","title":"Identification of recurrent mutational events in anorectal melanoma","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of British Columbia","funders":"","keywords":"Neuroblastoma RAS viral oncogene homolog; Melanoma; HRAS; Mutation; Gene duplication; Cancer research; Exon; Medicine; Targeted therapy; Biology; Gene; Cancer; Genetics; KRAS","score_opus":0.014545796410467047,"score_gpt":0.2679107364845423,"score_spread":0.25336494007407523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2530217932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980825,0.000496988,0.0002435052,0.000023056531,0.0000056862586,0.000007662899,0.00007029502,0.000017675326,0.0010526113],"genre_scores_gemma":[0.9990922,0.0001578647,0.000389078,0.000011394672,0.000007654677,0.0000035886467,0.00007524157,0.000007113352,0.00025587343],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99962425,0.000061903316,0.000040350118,0.000066321234,0.00012380173,0.00008331821],"domain_scores_gemma":[0.99916756,0.00019545479,0.00029045346,0.00010664968,0.00013228336,0.00010755136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004908712,0.00017250393,0.00021526896,0.002014695,0.00037379135,0.0006498438,0.0003024522,0.00042669568,0.0019497529],"category_scores_gemma":[0.0017134382,0.00017970541,0.0002484112,0.0006938957,0.00027299218,0.0003599421,0.00033657413,0.00026766266,0.00033031864],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047891526,0.000080593665,0.90927804,0.000050989423,0.000054969227,0.0052142087,0.00036935453,0.00023082558,0.055723175,0.00016975545,0.0002106107,0.028138595],"study_design_scores_gemma":[0.000008692539,0.0003383681,0.96031433,0.000027044467,0.00011311651,0.02354469,0.00045719225,0.0013683178,0.011856274,0.00016151417,0.001800602,0.000009701982],"about_ca_topic_score_codex":0.0010492776,"about_ca_topic_score_gemma":0.0019167463,"teacher_disagreement_score":0.002014695,"about_ca_system_score_codex":0.00025487103,"about_ca_system_score_gemma":0.00018981729,"threshold_uncertainty_score":0.006522596},"labels":[],"label_agreement":null},{"id":"W2568323308","doi":"10.1038/modpathol.2016.167","title":"Newly described salivary gland tumors","year":2017,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre","funders":"","keywords":"Salivary gland; Pathology; Mucoepidermoid carcinoma; Acinic cell carcinoma; Myoepithelial cell; Adenocarcinoma; Adenoid cystic carcinoma; ETV6; Cancer; Medicine; Carcinoma; Biology; Immunohistochemistry; Internal medicine; Chromosomal translocation","score_opus":0.16875756103989067,"score_gpt":0.3960760142988797,"score_spread":0.227318453258989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2568323308","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044738443,0.9963799,0.00030595242,0.00033032763,0.00028337157,0.000007806408,0.000041574123,0.000014628321,0.002188999],"genre_scores_gemma":[0.004996877,0.9915767,0.0006143803,0.00070080935,0.00059714064,0.000007261474,0.000115923714,0.000004831652,0.0013861009],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997458,0.000033532728,0.00005393974,0.000056919092,0.00008025194,0.000029548533],"domain_scores_gemma":[0.9996823,0.0001460517,0.00007338424,0.000014023671,0.00005595101,0.000028264527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030580835,0.0008682076,0.0009684598,0.0024714307,0.0003044748,0.0011736086,0.0006752306,0.0007799125,0.003855629],"category_scores_gemma":[0.0010045599,0.00027357347,0.00046677,0.0020728488,0.0006222379,0.0016743428,0.0008827056,0.0014368464,0.0013465784],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006447942,0.00004538598,0.0011811052,0.013090643,0.00010113532,0.0036684931,0.0001626415,0.00040219148,0.0018378957,0.0022161717,0.03434161,0.94288826],"study_design_scores_gemma":[0.000017588804,0.00004026236,0.0024415504,0.005605474,0.00033183274,0.031642977,0.00021888064,0.0001653566,0.0008718523,0.0022332214,0.956395,0.000036040285],"about_ca_topic_score_codex":0.0010112191,"about_ca_topic_score_gemma":0.0025538988,"teacher_disagreement_score":0.003855629,"about_ca_system_score_codex":0.0004428369,"about_ca_system_score_gemma":0.0012295505,"threshold_uncertainty_score":0.012898326},"labels":[],"label_agreement":null},{"id":"W2569537049","doi":"10.1038/modpathol.2016.221","title":"Expression of PD-L1 and presence of CD8-positive T cells in pre-treatment specimens of locally advanced cervical cancer","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":190,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"Alberta Innovates; Alberta Innovates - Health Solutions; Alberta Cancer Foundation","keywords":"Tissue microarray; CD8; Medicine; Immunohistochemistry; PD-L1; Cervical cancer; Chemoradiotherapy; Hazard ratio; Cancer; Pathology; Predictive marker; Immune system; Oncology; Immunotherapy; Cancer research; Internal medicine; Immunology; Confidence interval","score_opus":0.01535115698568248,"score_gpt":0.303202073314891,"score_spread":0.28785091632920856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2569537049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962435,0.0010533751,0.0002749234,0.000054771932,0.000016341457,0.000026221305,0.0002549894,0.000029362634,0.002046507],"genre_scores_gemma":[0.9981623,0.0002734295,0.0003519151,0.000031750897,0.000010207191,0.00002914624,0.00031759485,0.000004112307,0.0008194774],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99984086,0.00001817781,0.000021636562,0.000034021625,0.000041952684,0.00004323144],"domain_scores_gemma":[0.9997814,0.00006644968,0.000033584198,0.000023473764,0.00005420373,0.000040871055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023033426,0.00017203236,0.00019929805,0.000941386,0.0004053637,0.00042637714,0.00024359999,0.00043516263,0.0022357416],"category_scores_gemma":[0.00065809663,0.000168129,0.00017969821,0.00031541285,0.0002922208,0.00025897965,0.00025106684,0.00034352788,0.0004250908],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003204569,0.00020590199,0.6698425,0.0005508591,0.00010287693,0.0074199964,0.0011338809,0.000350224,0.28310555,0.00018541915,0.00096327724,0.032934964],"study_design_scores_gemma":[0.00003623464,0.0009050284,0.87952805,0.00007562189,0.0001970779,0.017106008,0.0025508679,0.0017117714,0.09084949,0.00017846699,0.00683647,0.000024802379],"about_ca_topic_score_codex":0.0015151383,"about_ca_topic_score_gemma":0.0027951144,"teacher_disagreement_score":0.0022357416,"about_ca_system_score_codex":0.00029784825,"about_ca_system_score_gemma":0.0002577119,"threshold_uncertainty_score":0.00747931},"labels":[],"label_agreement":null},{"id":"W2576572317","doi":"10.1038/modpathol.2016.231","title":"MCM2: An alternative to Ki-67 for measuring breast cancer cell proliferation","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôpital du Saint-Sacrement; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Fonds de Recherche du Québec - Santé; Fondation du cancer du sein du Québec; Cancer Research Institute","keywords":"Breast cancer; Immunohistochemistry; Ki-67; Tissue microarray; Cancer research; Cancer; Pathology; Biology; Medicine; Internal medicine","score_opus":0.03333208374437168,"score_gpt":0.309359406411739,"score_spread":0.2760273226673673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2576572317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5258627,0.07639804,0.2809642,0.002124211,0.00226881,0.0013090941,0.008575393,0.006668979,0.09582861],"genre_scores_gemma":[0.7205143,0.013364282,0.17068005,0.0005456203,0.00052546855,0.0018259352,0.005203409,0.001013269,0.08632765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99803895,0.0006486195,0.0000922426,0.00033716141,0.0005850146,0.0002981242],"domain_scores_gemma":[0.99908173,0.00028284334,0.00011492538,0.00013293706,0.0002522837,0.00013531618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015144942,0.001448981,0.00084872183,0.009075118,0.0012828558,0.0017432219,0.0016000606,0.0016794981,0.011815064],"category_scores_gemma":[0.0015191444,0.0011791739,0.0007354607,0.004057071,0.0011525721,0.0017578849,0.0013025475,0.0021327427,0.003266943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017243834,0.00014690922,0.00907066,0.0007307124,0.00020017663,0.00033456014,0.00028940215,0.00036907516,0.9239032,0.004237428,0.0023971798,0.05659621],"study_design_scores_gemma":[0.0001335973,0.0009261913,0.030134117,0.00012156195,0.0003974989,0.0024182547,0.00043573254,0.010739475,0.9106082,0.0025398487,0.04137489,0.00017059203],"about_ca_topic_score_codex":0.005485509,"about_ca_topic_score_gemma":0.009671673,"teacher_disagreement_score":0.011815064,"about_ca_system_score_codex":0.0012280997,"about_ca_system_score_gemma":0.0007221816,"threshold_uncertainty_score":0.03952533},"labels":[],"label_agreement":null},{"id":"W2578246345","doi":"10.1038/modpathol.2016.223","title":"#InSituPathologists: how the #USCAP2015 meeting went viral on Twitter and founded the social media movement for the United States and Canadian Academy of Pathology","year":2017,"lang":"en","type":"editorial","venue":"Modern Pathology","topic":"Social Media in Health Education","field":"Social Sciences","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Social media; Library science; Medicine; World Wide Web; Computer science","score_opus":0.13005372930838635,"score_gpt":0.3993189159795301,"score_spread":0.26926518667114374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2578246345","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000019430392,0.0020227248,0.00007180122,0.049679935,0.94696414,0.00001401343,0.000051218438,0.000040110288,0.0011366645],"genre_scores_gemma":[0.0002809888,0.0026442888,0.00008201913,0.027638381,0.95804536,0.00003152153,0.00004025917,0.00006125317,0.011175854],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99001735,0.0018728861,0.0010754189,0.0009297766,0.0054267924,0.00067789666],"domain_scores_gemma":[0.9593753,0.019052098,0.0017756711,0.00094080245,0.012291789,0.006564351],"candidate_categories":["scholarly_communication"],"consensus_categories":[],"category_scores_codex":[0.015248335,0.005222642,0.0034563523,0.0069039883,0.0077459286,0.01601427,0.0050774394,0.028309517,0.01794523],"category_scores_gemma":[0.04706394,0.0014836447,0.0038576957,0.002472789,0.00422108,0.007571936,0.0035402891,0.03472422,0.012355025],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013808506,0.0000086129385,0.000015405603,0.00006559209,0.000007462185,0.000044668068,0.000020414871,0.000009124794,0.000018420078,0.00022073709,0.9975938,0.0019817932],"study_design_scores_gemma":[0.000044561933,0.000020564465,0.00018861613,0.0005885697,0.00004911916,0.00010227182,0.00014676683,0.00012649762,0.00009539431,0.0013419163,0.99727005,0.000025553185],"about_ca_topic_score_codex":0.006513418,"about_ca_topic_score_gemma":0.026264885,"teacher_disagreement_score":0.9839857,"about_ca_system_score_codex":0.0061004465,"about_ca_system_score_gemma":0.0077777538,"threshold_uncertainty_score":0.080641806},"labels":[],"label_agreement":null},{"id":"W2578772391","doi":"10.1038/modpathol.2016.229","title":"Male breast cancer precursor lesions: analysis of the EORTC 10085/TBCRC/BIG/NABCG International Male Breast Cancer Program","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Male Breast Health Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"European Organisation for Research and Treatment of Cancer; Breast Cancer Research Foundation","keywords":"Breast cancer; Ductal carcinoma; Medicine; Cancer; Lobular carcinoma; Oncology; Male breast cancer; Pathology; Carcinogenesis; Carcinoma in situ; Internal medicine; Estrogen receptor; Progesterone receptor","score_opus":0.040278710077459666,"score_gpt":0.3705814792561191,"score_spread":0.33030276917865947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2578772391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99519217,0.00022480403,0.00008018218,0.00011923492,0.0000044681915,0.000035364494,0.0021138643,0.000007759041,0.0022221634],"genre_scores_gemma":[0.9962997,0.00016608785,0.00015524053,0.000068857946,0.000009608893,0.000023710993,0.0026821815,0.000012698881,0.00058199797],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99949646,0.00011738337,0.00003963448,0.000083249906,0.00013484627,0.0001283785],"domain_scores_gemma":[0.99884593,0.00012982433,0.00042580997,0.00007950152,0.00021139193,0.00030758692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066622626,0.00022092063,0.0003130811,0.002309426,0.00057084294,0.0006303822,0.0005792513,0.00026682898,0.0028228248],"category_scores_gemma":[0.0022095658,0.00018849436,0.0003226342,0.0025075055,0.00021264717,0.0005566022,0.0011994924,0.0004921293,0.00041660052],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008550869,0.000037697864,0.9969913,0.00000781927,0.00001629982,0.00006401576,0.000059076527,0.000021075195,0.000117158306,0.00004232789,0.00028047757,0.0022772644],"study_design_scores_gemma":[0.000003017715,0.000038763843,0.99886715,0.000006271394,0.000017584467,0.00018488857,0.00028408383,0.00006547032,0.000065417706,0.00002221675,0.00044372142,0.0000015584376],"about_ca_topic_score_codex":0.012605467,"about_ca_topic_score_gemma":0.022400597,"teacher_disagreement_score":0.012605467,"about_ca_system_score_codex":0.00054903235,"about_ca_system_score_gemma":0.0010701006,"threshold_uncertainty_score":0.02506417},"labels":[],"label_agreement":null},{"id":"W2592003306","doi":"10.1038/modpathol.2017.9","title":"Molecular correlates and rate of lymph node metastasis of non-invasive follicular thyroid neoplasm with papillary-like nuclear features and invasive follicular variant papillary thyroid carcinoma: the impact of rigid criteria to distinguish non-invasive follicular thyroid neoplasm with papillary-like nuclear features","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":187,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Micrometastasis; Pathology; Thyroid carcinoma; Medicine; Thyroid neoplasm; Thyroid; Lymph node; Metastasis; Follicular cell; Follicular phase; Cancer; Internal medicine","score_opus":0.0075319972482176785,"score_gpt":0.24424768926555232,"score_spread":0.23671569201733464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592003306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99866915,0.00036286257,0.00020199677,0.000038576873,0.0000066425873,0.0000037211041,0.00010037066,0.000004528149,0.0006121789],"genre_scores_gemma":[0.9995689,0.00006899843,0.00008489218,0.0000073270985,0.000009622549,0.000002598513,0.00012269556,0.0000037604075,0.00013117322],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994715,0.000116310584,0.00006542883,0.0001182696,0.00013641885,0.00009214553],"domain_scores_gemma":[0.9973489,0.0009992828,0.0007329514,0.00036984312,0.000286558,0.00026247386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092572306,0.00022517725,0.00029476595,0.0008945684,0.00029762997,0.0008433737,0.00058724626,0.00060008065,0.0016100575],"category_scores_gemma":[0.003950631,0.00024711716,0.0004351678,0.0007050672,0.0005216711,0.00076678,0.0004147597,0.00058663986,0.00036717698],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003363497,0.000020975587,0.99552566,0.000006863062,0.000040702354,0.00012213204,0.000043472126,0.000095854135,0.0016659112,0.00007275679,0.000046538327,0.002022796],"study_design_scores_gemma":[0.0000046152827,0.000057040645,0.99779874,0.0000022790184,0.00004623201,0.0006764113,0.0001389735,0.0006804178,0.0003147974,0.0001110868,0.00016419614,0.0000053198437],"about_ca_topic_score_codex":0.0019295206,"about_ca_topic_score_gemma":0.0019904142,"teacher_disagreement_score":0.0019295206,"about_ca_system_score_codex":0.00034416482,"about_ca_system_score_gemma":0.00029786897,"threshold_uncertainty_score":0.0053862333},"labels":[],"label_agreement":null},{"id":"W2616661332","doi":"10.1038/modpathol.2017.29","title":"Presence of invasive cribriform or intraductal growth at biopsy outperforms percentage grade 4 in predicting outcome of Gleason score 3+4=7 prostate cancer","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":106,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Cribriform; Medicine; Prostatectomy; Prostate cancer; Biopsy; Urology; Carcinoma; Cancer; Lymphovascular invasion; Internal medicine; Pathology; Metastasis","score_opus":0.056633584996866534,"score_gpt":0.3295577863775071,"score_spread":0.27292420138064055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2616661332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948506,0.0011585165,0.0005015193,0.0002020395,0.00008754232,0.000012520554,0.00018546166,0.00002505808,0.0029767526],"genre_scores_gemma":[0.99907047,0.0001839858,0.00018891755,0.00002714619,0.000051122497,0.0000022864604,0.00017578782,0.0000039972642,0.00029632516],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99946123,0.00018026553,0.000045643425,0.0000753286,0.00011360555,0.00012386018],"domain_scores_gemma":[0.9968059,0.0009170511,0.00083368836,0.00018165521,0.00034583692,0.0009159394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001255225,0.0006705604,0.0004172774,0.001090354,0.00044333615,0.0012722822,0.00071363966,0.0009248644,0.002474182],"category_scores_gemma":[0.0049621416,0.00021545419,0.0006875703,0.00057969184,0.00058197987,0.0010062485,0.0008263572,0.00078782585,0.0005886522],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000359033,0.0000253514,0.99428046,0.000012560078,0.000053550557,0.00005400964,0.000027752692,0.00022093937,0.00044328655,0.000024643607,0.0001074404,0.0043910407],"study_design_scores_gemma":[0.00000951138,0.0005290484,0.9937342,0.00003291485,0.00024921144,0.0006606968,0.00032509904,0.002820647,0.00062416313,0.0003570617,0.0006394194,0.000018072784],"about_ca_topic_score_codex":0.0031526408,"about_ca_topic_score_gemma":0.006659531,"teacher_disagreement_score":0.0031526408,"about_ca_system_score_codex":0.00033628178,"about_ca_system_score_gemma":0.00055764883,"threshold_uncertainty_score":0.008276999},"labels":[],"label_agreement":null},{"id":"W2617443522","doi":"10.1038/modpathol.2017.30","title":"Central pathology review with two-stage quality assurance for pathological response after neoadjuvant chemotherapy in the ARTemis Trial","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"University of California, San Francisco; University of Warwick; Cancer Research UK; National Institute for Health and Care Research; Sanofi","keywords":"Medicine; Breast cancer; Surgical pathology; Neoadjuvant therapy; Pathological; Biopsy; Chemotherapy; Concordance; Cancer; Axillary lymph nodes; Clinical trial; Oncology; Pathology; Internal medicine; Radiology; Surgery","score_opus":0.033027558460732735,"score_gpt":0.34892133773234923,"score_spread":0.3158937792716165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2617443522","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29163375,0.3659243,0.07247275,0.050527707,0.016348287,0.02776055,0.049076993,0.0030967218,0.12315891],"genre_scores_gemma":[0.8300656,0.037418675,0.046734374,0.016348498,0.004189428,0.01510534,0.031824183,0.0014204463,0.016893454],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9625044,0.02204039,0.007659276,0.0022139116,0.0045388537,0.0010431163],"domain_scores_gemma":[0.8623266,0.028582567,0.028931843,0.019475449,0.057307012,0.0033765843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.06860729,0.000558572,0.0022471242,0.0033520127,0.0012432875,0.003956251,0.0019615337,0.0012930139,0.006028786],"category_scores_gemma":[0.07987054,0.0006997242,0.0023467522,0.003466463,0.0012465602,0.0016501177,0.0020399971,0.0011041757,0.0020182875],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.041153695,0.00032833772,0.103394896,0.03185429,0.008941058,0.0013266909,0.0023198947,0.0017920717,0.010218711,0.008379126,0.20586863,0.5844226],"study_design_scores_gemma":[0.007188929,0.0038919526,0.27102304,0.015153599,0.011790747,0.0037170348,0.00071912707,0.0032176587,0.020271806,0.0064694537,0.65616393,0.00039284726],"about_ca_topic_score_codex":0.0027257511,"about_ca_topic_score_gemma":0.00341482,"teacher_disagreement_score":0.06860729,"about_ca_system_score_codex":0.004432128,"about_ca_system_score_gemma":0.011065308,"threshold_uncertainty_score":0.3628344},"labels":[],"label_agreement":null},{"id":"W2620163964","doi":"10.1038/modpathol.2017.46","title":"Recommendations for reporting tumor budding in colorectal cancer based on the International Tumor Budding Consensus Conference (ITBCC) 2016","year":2017,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":1154,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brampton Civic Hospital; University of Toronto; Mount Sinai Hospital","funders":"AstraZeneca","keywords":"Tumor budding; Budding; Colorectal cancer; Medicine; Pathology; Cancer; Biology; Internal medicine","score_opus":0.3095918762569948,"score_gpt":0.4558012336993512,"score_spread":0.1462093574423564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2620163964","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":"reporting","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":"reporting","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006854819,0.9361234,0.0044537573,0.038626477,0.009913737,0.0007299694,0.0015088068,0.00014131467,0.007817165],"genre_scores_gemma":[0.009459727,0.92316884,0.029867837,0.024849795,0.0033864581,0.0012527112,0.003746684,0.0000727701,0.0041952147],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98875135,0.002985692,0.0044735833,0.00054805534,0.0028101378,0.00043119342],"domain_scores_gemma":[0.976782,0.0071420446,0.0043631466,0.0005270235,0.0105735175,0.00061225414],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.016679635,0.0013719852,0.0033418823,0.009227156,0.0011204499,0.003479568,0.0053989617,0.004592601,0.0053036856],"category_scores_gemma":[0.041701917,0.00094000343,0.004862747,0.0054976055,0.002030908,0.0044160653,0.0032407686,0.005067924,0.003487732],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024064026,0.0000697007,0.0030978725,0.07617636,0.0005119837,0.0004893312,0.00058116583,0.00039269382,0.0010248794,0.006541621,0.27052182,0.6403519],"study_design_scores_gemma":[0.00018786124,0.000110929184,0.0045698225,0.1475206,0.0014595466,0.0014709793,0.00078277424,0.00024401734,0.00074300985,0.005716553,0.8370757,0.00011820508],"about_ca_topic_score_codex":0.010144728,"about_ca_topic_score_gemma":0.017916866,"teacher_disagreement_score":0.98332036,"about_ca_system_score_codex":0.0028365408,"about_ca_system_score_gemma":0.013321795,"threshold_uncertainty_score":0.08821136},"labels":[],"label_agreement":null},{"id":"W2625513516","doi":"10.1038/modpathol.2017.31","title":"p16 immunohistochemistry in oropharyngeal squamous cell carcinoma: a comparison of antibody clones using patient outcomes and high-risk human papillomavirus RNA status","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Head and Neck Cancer Studies","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"clone (Java method); Immunohistochemistry; Tissue microarray; Antibody; Human papillomavirus; Medicine; Pathology; In situ hybridization; Cutoff; Oncology; Differential diagnosis; Biology; Internal medicine; Immunology; Gene; Gene expression","score_opus":0.03151133496478081,"score_gpt":0.3520354443600258,"score_spread":0.320524109395245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2625513516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99887604,0.00044399963,0.00015622625,0.000013588499,0.0000061309756,0.0000059248714,0.000045880828,0.000002047831,0.0004502417],"genre_scores_gemma":[0.9994879,0.0001349959,0.0000756248,0.000011002991,0.0000056469353,0.000005796494,0.000092744434,0.0000026151324,0.00018375591],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987281,0.0005002932,0.00012655181,0.00016586414,0.0002328805,0.00024635182],"domain_scores_gemma":[0.9979231,0.0009978578,0.00044314604,0.00014763964,0.00027951403,0.00020870563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002569934,0.0002675805,0.00045776012,0.0008012407,0.00027965347,0.00066509604,0.0003641708,0.00044256198,0.0016691468],"category_scores_gemma":[0.0036149875,0.00022994544,0.00046442615,0.00064451864,0.00035706782,0.0007996868,0.0005976751,0.00031426776,0.000317487],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024056614,0.00006341734,0.985829,0.000029463412,0.00017415082,0.000048984333,0.00018907606,0.000043225926,0.0056103007,0.00003248591,0.000050015766,0.00552425],"study_design_scores_gemma":[0.000034201097,0.00082238397,0.99623907,0.000009640911,0.00014708326,0.00026322674,0.00030052522,0.00019252056,0.0016290318,0.00004125019,0.0003163762,0.0000046869427],"about_ca_topic_score_codex":0.0011144966,"about_ca_topic_score_gemma":0.002550672,"teacher_disagreement_score":0.002569934,"about_ca_system_score_codex":0.00032810814,"about_ca_system_score_gemma":0.00030516414,"threshold_uncertainty_score":0.01359123},"labels":[],"label_agreement":null},{"id":"W2625782670","doi":"10.1038/modpathol.2017.42","title":"BCOR is a robust diagnostic immunohistochemical marker of genetically diverse high-grade endometrial stromal sarcoma, including tumors exhibiting variant morphology","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":141,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency","funders":"National Cancer Institute","keywords":"Endometrial stromal sarcoma; Stromal cell; Pathology; Sarcoma; Immunohistochemistry; Hematopathology; Biology; Undifferentiated Pleomorphic Sarcoma; Medicine; Cancer research; Soft tissue sarcoma; Cytogenetics; Gene","score_opus":0.043198786508844365,"score_gpt":0.2939237622093415,"score_spread":0.2507249757004972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2625782670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.917415,0.013984678,0.030606464,0.0007037456,0.00018857804,0.0002459669,0.002009963,0.0009948444,0.03385083],"genre_scores_gemma":[0.96131754,0.0029250435,0.025791032,0.00024215225,0.000103711194,0.000096644115,0.0029071646,0.00011058956,0.006506075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989844,0.00012938942,0.00010089474,0.00018801325,0.0003577766,0.00023951681],"domain_scores_gemma":[0.998939,0.00014215802,0.00028727393,0.00011574297,0.00032270534,0.00019319776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010516038,0.0006890824,0.00039787023,0.0037194833,0.00045630804,0.0007564858,0.00060236355,0.0008147633,0.0040496234],"category_scores_gemma":[0.001074966,0.0002827804,0.00029875865,0.0012460575,0.0005869186,0.0007139181,0.0009690265,0.000513448,0.0016946476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054597965,0.000060987302,0.05722756,0.0003072014,0.00011772247,0.002394955,0.00012447235,0.00016957065,0.8919911,0.0011147548,0.00139895,0.044546667],"study_design_scores_gemma":[0.000094650786,0.00061814697,0.2905804,0.00022494046,0.00039863153,0.0500893,0.00083037507,0.0059983437,0.5579431,0.0021804585,0.09094029,0.00010138271],"about_ca_topic_score_codex":0.0010374701,"about_ca_topic_score_gemma":0.0023171306,"teacher_disagreement_score":0.0040496234,"about_ca_system_score_codex":0.00039787157,"about_ca_system_score_gemma":0.0003469085,"threshold_uncertainty_score":0.013547361},"labels":[],"label_agreement":null},{"id":"W2726951760","doi":"10.1038/modpathol.2017.69","title":"Inflammatory myofibroblastic tumor of the uterus: a clinicopathological, immunohistochemical, and molecular analysis of 13 cases highlighting their broad morphologic spectrum","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"IgG4-Related and Inflammatory Diseases","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"Stony Brook University","keywords":"Pathology; Immunohistochemistry; Nuclear atypia; Atypia; Fluorescence in situ hybridization; Medicine; H&E stain; Biology","score_opus":0.015130094229072041,"score_gpt":0.26461628895734945,"score_spread":0.2494861947282774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2726951760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99624133,0.001157672,0.0010936289,0.000052568557,0.000008155892,0.000039704526,0.00008398317,0.000019483023,0.0013034415],"genre_scores_gemma":[0.9982216,0.00044138936,0.00091844116,0.000023576105,0.0000223901,0.000022405202,0.000101938516,0.0000062079735,0.00024206114],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9995161,0.00006606415,0.000077832134,0.00010390606,0.00007347441,0.00016253386],"domain_scores_gemma":[0.9991897,0.00029873932,0.00015206469,0.00009420505,0.000065779896,0.00019951827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006797525,0.0010501952,0.00062211335,0.0020237716,0.0012310885,0.00080115243,0.0007157394,0.0007967721,0.0014582868],"category_scores_gemma":[0.0017239674,0.0007398859,0.000602907,0.0013247026,0.0016463036,0.0005837184,0.0012162217,0.0004118192,0.00039827838],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093249284,0.0002419917,0.45051035,0.00020850965,0.00013504199,0.5061517,0.0014210684,0.00055983197,0.023173586,0.0004254268,0.00034077192,0.015899306],"study_design_scores_gemma":[0.000079584424,0.0005490558,0.3503016,0.00007625749,0.00024056814,0.6336166,0.0016098735,0.0009832606,0.009556632,0.00045909337,0.00247213,0.000055255055],"about_ca_topic_score_codex":0.0010529176,"about_ca_topic_score_gemma":0.0014987692,"teacher_disagreement_score":0.0020237716,"about_ca_system_score_codex":0.0005202219,"about_ca_system_score_gemma":0.00045160003,"threshold_uncertainty_score":0.0048784614},"labels":[],"label_agreement":null},{"id":"W2737331401","doi":"10.1038/modpathol.2017.80","title":"Genomic abnormalities in invasive endocervical adenocarcinoma correlate with pattern of invasion: biologic and clinical implications","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; Health Sciences Centre","funders":"","keywords":"KRAS; Adenocarcinoma; Hematopathology; CDKN2A; PTEN; Pathology; Biology; Lymphovascular invasion; Oncology; Cancer; Medicine; Metastasis; Gene; Colorectal cancer; Cytogenetics; Genetics","score_opus":0.07044598143701049,"score_gpt":0.33441674092785845,"score_spread":0.263970759490848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2737331401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881214,0.0065023177,0.0008008901,0.0007000213,0.000033684857,0.000011835757,0.00044675625,0.00002937877,0.0033537108],"genre_scores_gemma":[0.9978067,0.0011570626,0.00039159888,0.00007461624,0.0000465977,0.000004066764,0.0001889422,0.0000043944287,0.0003258737],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997023,0.000087980916,0.00002503117,0.00006376998,0.00007366372,0.000047279093],"domain_scores_gemma":[0.99875724,0.0003765077,0.0005198368,0.00010360086,0.00015062843,0.00009225988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043801972,0.0002295461,0.00025315201,0.001175059,0.00022196808,0.00083669246,0.00029999594,0.0005062135,0.002369645],"category_scores_gemma":[0.0029247913,0.00019468444,0.0001686235,0.0013124945,0.0005784872,0.0004876544,0.0003089127,0.0004593858,0.00028834955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005206066,0.00007604293,0.9495611,0.00007094676,0.0001149474,0.001084519,0.00014435891,0.00019686432,0.021576054,0.0003721828,0.00033509283,0.025947252],"study_design_scores_gemma":[0.000007688571,0.00008651589,0.99357706,0.0000120709965,0.000064074695,0.0022927197,0.00025653426,0.000260053,0.0019476153,0.00047894675,0.0010107766,0.0000059184144],"about_ca_topic_score_codex":0.000744974,"about_ca_topic_score_gemma":0.0012807961,"teacher_disagreement_score":0.002369645,"about_ca_system_score_codex":0.00023349513,"about_ca_system_score_gemma":0.00024546072,"threshold_uncertainty_score":0.007927239},"labels":[],"label_agreement":null},{"id":"W2738595852","doi":"10.1038/modpathol.2017.62","title":"Altered peritumoral microRNA expression predicts head and neck cancer patients with a high risk of recurrence","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Juravinski Cancer Centre","funders":"Ministero della Salute; Associazione Italiana per la Ricerca sul Cancro; ArcelorMittal","keywords":"microRNA; Head and neck squamous-cell carcinoma; Pathology; Medicine; Cancer; Head and neck cancer; Cell; Carcinoma; Oncology; Gene; Biology; Internal medicine","score_opus":0.009691200268516642,"score_gpt":0.24978873852814584,"score_spread":0.2400975382596292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2738595852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979924,0.0005189991,0.000241664,0.00009624553,0.000024086616,0.0000047259723,0.00019606526,0.000012051241,0.0009139455],"genre_scores_gemma":[0.9992487,0.00014582429,0.00013478301,0.00003001178,0.000028237911,0.000006163531,0.00015490987,0.0000051974157,0.00024606922],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998429,0.00003084951,0.000017539578,0.00003224355,0.00003508369,0.000041483745],"domain_scores_gemma":[0.9995183,0.000120962795,0.00020111547,0.000030216484,0.00005020393,0.00007924155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018776323,0.00020379855,0.00031297994,0.00060695,0.00032389193,0.0006744366,0.00019661766,0.00045531287,0.0020048106],"category_scores_gemma":[0.00087827543,0.00018307954,0.0002938277,0.00060382386,0.0002863655,0.00028743118,0.00029648835,0.0004072669,0.0003379955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046170247,0.000034917,0.9841664,0.000028687724,0.00006977179,0.0005163416,0.00008928469,0.00008119282,0.009252248,0.000064142376,0.00028022385,0.004955076],"study_design_scores_gemma":[0.000006342407,0.00007293333,0.9957082,0.0000059267104,0.00009740553,0.0014089615,0.00020438826,0.0005888147,0.0012167954,0.00013364948,0.0005486107,0.000007881128],"about_ca_topic_score_codex":0.0007117504,"about_ca_topic_score_gemma":0.001120839,"teacher_disagreement_score":0.0020048106,"about_ca_system_score_codex":0.00018207871,"about_ca_system_score_gemma":0.00022833703,"threshold_uncertainty_score":0.0067067146},"labels":[],"label_agreement":null},{"id":"W2741938403","doi":"10.1038/modpathol.2017.82","title":"The identification of challenges in tissue collection for biomarker studies: the Q-CROC-03 neoadjuvant breast cancer translational trial experience","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Quebec - Clinical Research Organization in Cancer; Hôpital du Sacré-Cœur de Montréal; McGill University Health Centre; Jewish General Hospital; Centre Hospitalier de l’Université de Montréal; McGill University","funders":"Fonds de Recherche du Québec - Santé; Jewish General Hospital; Fondation du cancer du sein du Québec; Fondation de l'Hôpital général juif; McGill University","keywords":"Medicine; Chemotherapy; Breast cancer; Biopsy; Pathology; Biomarker; Cancer; Oncology; Internal medicine; Biology","score_opus":0.07327935222256972,"score_gpt":0.36725237238566133,"score_spread":0.2939730201630916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741938403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6386898,0.06978048,0.07443433,0.1666049,0.0062847477,0.0026552621,0.0049443603,0.0005360336,0.036070086],"genre_scores_gemma":[0.8808671,0.012207348,0.049091205,0.04237359,0.0040983544,0.0024639643,0.0045697037,0.0006384899,0.0036902006],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9837977,0.011527009,0.00088553096,0.0010347615,0.002171384,0.0005835936],"domain_scores_gemma":[0.9529934,0.024660865,0.0053995145,0.0060619046,0.007026399,0.0038578433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.09276193,0.00047466464,0.001236084,0.0005973379,0.0011604152,0.0057083317,0.0012676965,0.001307789,0.0023247944],"category_scores_gemma":[0.04945043,0.000390653,0.0006808735,0.0011329298,0.0022362182,0.0031315072,0.0026476434,0.0046317684,0.0012254746],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019816741,0.0013772809,0.13237889,0.0018528862,0.0008266492,0.0019636157,0.0039802846,0.0038911642,0.02676202,0.016892841,0.08243001,0.7078276],"study_design_scores_gemma":[0.0050975294,0.02662709,0.2402405,0.0035252068,0.0014362201,0.017405996,0.010252551,0.008662375,0.03542342,0.045245733,0.6055889,0.00049442623],"about_ca_topic_score_codex":0.0012881444,"about_ca_topic_score_gemma":0.003487946,"teacher_disagreement_score":0.09276193,"about_ca_system_score_codex":0.002043349,"about_ca_system_score_gemma":0.00422789,"threshold_uncertainty_score":0.49057782},"labels":[],"label_agreement":null},{"id":"W2744601229","doi":"10.1038/modpathol.2017.81","title":"Molecular-based classification algorithm for endometrial carcinoma categorizes ovarian endometrioid carcinoma into prognostically significant groups","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":100,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Health Sciences Centre; Ontario Institute for Cancer Research; University of Toronto; Sinai Health System; Sunnybrook Health Science Centre","funders":"Hospital for Sick Children","keywords":"MSH2; Serous carcinoma; MSH6; Ovarian carcinoma; Carcinoma; Ovarian cancer; Endometrial cancer; Pathology; Oncology; Biology; Serous fluid; MLH1; Lynch syndrome; Internal medicine; Medicine; DNA mismatch repair; Cancer; Colorectal cancer","score_opus":0.04402421629864145,"score_gpt":0.3094438454152406,"score_spread":0.26541962911659917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744601229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7435684,0.0032902227,0.22432993,0.003112679,0.00095821085,0.0016473006,0.0073051895,0.0030352604,0.012752773],"genre_scores_gemma":[0.7921764,0.0006677441,0.19422065,0.00041008551,0.00032952367,0.00080628163,0.0068076816,0.00012835073,0.00445329],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99928695,0.00010503943,0.00010737685,0.00017503991,0.00020982185,0.00011586137],"domain_scores_gemma":[0.99885607,0.0003287759,0.00018389702,0.00007552015,0.00045068163,0.0001051296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015064284,0.00080913614,0.000831825,0.004292755,0.0008991898,0.0019654264,0.0011735511,0.0009573687,0.004021863],"category_scores_gemma":[0.0040654205,0.00019680617,0.0012100298,0.0015837318,0.00028286077,0.0008700104,0.0009686508,0.0009140683,0.0020687063],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018951591,0.00078351574,0.45898154,0.00032717737,0.0007072479,0.0005260857,0.00028842012,0.011988422,0.01733129,0.0025799219,0.015535732,0.48905545],"study_design_scores_gemma":[0.00065076735,0.0016185084,0.3609737,0.00038031235,0.0019304518,0.0044310056,0.0009559086,0.5502423,0.026343506,0.01897939,0.033301216,0.00019291478],"about_ca_topic_score_codex":0.0021838185,"about_ca_topic_score_gemma":0.0027574573,"teacher_disagreement_score":0.004292755,"about_ca_system_score_codex":0.00069523905,"about_ca_system_score_gemma":0.0015470992,"threshold_uncertainty_score":0.013454437},"labels":[],"label_agreement":null},{"id":"W2750632548","doi":"10.1038/modpathol.2017.100","title":"Anaplastic sarcomas of the kidney are characterized by DICER1 mutations","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; University of Toronto; Hospital for Sick Children; McGill University and Génome Québec Innovation Centre; Jewish General Hospital; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Sanger sequencing; Germline; Biology; Sarcoma; Germline mutation; Cancer research; Mutation; Missense mutation; Pathology; Anaplasia; Genetics; Medicine; Gene","score_opus":0.02068706555346402,"score_gpt":0.2763724910975696,"score_spread":0.2556854255441056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2750632548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863716,0.0029926565,0.0014840843,0.00013141782,0.00003613284,0.00002172013,0.00033027094,0.00004144286,0.008590744],"genre_scores_gemma":[0.9976714,0.00058210496,0.0010943256,0.000024251318,0.000024463257,0.0000039255074,0.00009387183,0.0000051638417,0.0005003638],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973375,0.00004878217,0.000040078623,0.00007019991,0.00006125626,0.00004601755],"domain_scores_gemma":[0.9990946,0.0003005594,0.00029090242,0.00008017192,0.00010707826,0.0001267877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036410295,0.0003403959,0.00021059533,0.0015802867,0.00031825766,0.00044161943,0.0002946061,0.00046761343,0.002540427],"category_scores_gemma":[0.0015348603,0.00020353484,0.00013678112,0.0007881855,0.00053257967,0.00042015186,0.00039556576,0.00022341979,0.00039108336],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087074697,0.00006532042,0.42416254,0.00052804436,0.00014017259,0.16205578,0.00083846005,0.0005100822,0.37364027,0.0035876823,0.0010974958,0.032503426],"study_design_scores_gemma":[0.000029453267,0.00018542005,0.38507164,0.00006984256,0.00012695891,0.5163185,0.0006806579,0.0007922471,0.08329541,0.0017474224,0.011643662,0.00003884666],"about_ca_topic_score_codex":0.00035285245,"about_ca_topic_score_gemma":0.00043392778,"teacher_disagreement_score":0.002540427,"about_ca_system_score_codex":0.00014732286,"about_ca_system_score_gemma":0.00020711705,"threshold_uncertainty_score":0.008498609},"labels":[],"label_agreement":null},{"id":"W2750832563","doi":"10.1038/modpathol.2017.110","title":"Pulmonary large cell neuroendocrine carcinoma with adenocarcinoma-like features: napsin A expression and genomic alterations","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Cancer Institute; National Institutes of Health","keywords":"Adenocarcinoma; Pathology; Malignancy; Synaptophysin; Carcinoma; Small-cell carcinoma; Medicine; Lung; Small Cell Lung Carcinoma; Immunohistochemistry; Cancer; Internal medicine","score_opus":0.016693012641654164,"score_gpt":0.2828892204834108,"score_spread":0.2661962078417566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2750832563","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928746,0.0012199737,0.0011356671,0.00025142598,0.000027826936,0.000025506517,0.00017130384,0.000030314419,0.0042634513],"genre_scores_gemma":[0.99897146,0.00019938473,0.0003480885,0.00002874333,0.000023678367,0.000004616567,0.00007527727,0.000004174676,0.0003446893],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998481,0.000019930969,0.000019041094,0.00003613254,0.000043322267,0.00003348199],"domain_scores_gemma":[0.99963546,0.00012877343,0.00007086353,0.000040712675,0.000049896582,0.00007415684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019680128,0.00032239134,0.00021304897,0.0006934101,0.00029022805,0.0005118316,0.00024369107,0.0005225293,0.0022315045],"category_scores_gemma":[0.00081798114,0.00016937764,0.00020817705,0.00049484277,0.00043336579,0.0004157668,0.0003228173,0.00030043584,0.0004447974],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009669965,0.00012488094,0.3115853,0.000115945164,0.000098762685,0.28060344,0.00038317428,0.0005273452,0.3884029,0.0008273684,0.00050929683,0.015854537],"study_design_scores_gemma":[0.000052276268,0.0002809979,0.54796773,0.000021185673,0.00021549499,0.39078355,0.0009715645,0.0030802935,0.05001856,0.002063186,0.004514118,0.000031066797],"about_ca_topic_score_codex":0.000819759,"about_ca_topic_score_gemma":0.0010177289,"teacher_disagreement_score":0.0022315045,"about_ca_system_score_codex":0.00024943126,"about_ca_system_score_gemma":0.00018180945,"threshold_uncertainty_score":0.007465124},"labels":[],"label_agreement":null},{"id":"W2751113132","doi":"10.1038/modpathol.2017.115","title":"Centrilobular ductular reaction correlates with fibrosis stage and fibrosis progression in non-alcoholic steatohepatitis","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Steatohepatitis; Fibrosis; Medicine; Pathology; Gastroenterology; Stage (stratigraphy); Internal medicine; Fatty liver; Biopsy; Biology; Disease","score_opus":0.012306148598346821,"score_gpt":0.27652265170131346,"score_spread":0.2642165031029666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2751113132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998844,0.00044195642,0.00014425564,0.000030350184,0.000007729763,0.0000043376294,0.000031957195,0.000006811195,0.0004885682],"genre_scores_gemma":[0.9995271,0.00009343772,0.00009242111,0.000009712922,0.000013341662,0.0000028741642,0.000050033592,0.0000019136423,0.00020911329],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996741,0.00013355826,0.00004077246,0.0000433764,0.000056956495,0.000051250754],"domain_scores_gemma":[0.9977558,0.0004593367,0.0010586837,0.00013593242,0.0002430365,0.00034725698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071084884,0.0002721235,0.0003031352,0.0010313086,0.000286763,0.0006035037,0.00026229932,0.00045276532,0.0017423285],"category_scores_gemma":[0.0017937381,0.00031525173,0.00028710553,0.0007865596,0.00047685168,0.00056830584,0.00040543967,0.0005721554,0.0003072699],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004981392,0.000049645914,0.99586356,0.000012955766,0.000031272102,0.00014207314,0.000041070904,0.00003064126,0.001549563,0.000020967904,0.000027158743,0.0017329715],"study_design_scores_gemma":[0.0000038463363,0.00009836123,0.9988697,0.0000027202705,0.000019387233,0.00037624265,0.00008465928,0.00014792422,0.0002961896,0.00003404159,0.00006450472,0.0000023362873],"about_ca_topic_score_codex":0.0005414883,"about_ca_topic_score_gemma":0.0007127377,"teacher_disagreement_score":0.0017423285,"about_ca_system_score_codex":0.00018487214,"about_ca_system_score_gemma":0.00015908762,"threshold_uncertainty_score":0.0058286786},"labels":[],"label_agreement":null},{"id":"W2760922128","doi":"10.1038/modpathol.2017.77","title":"Do significant TFE3 gene rearrangements occur in succinate dehydrogenase-deficient renal cell carcinoma? Borderline FISH results should be interpreted with caution","year":2017,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"TFE3; SDHB; Renal cell carcinoma; Pathology; Biology; Gene mutation; Cancer research; Fluorescence in situ hybridization; Clear cell carcinoma; Gene rearrangement; Carcinoma; Chromosomal translocation; Mutation; Gene; Medicine; Genetics; Gene expression","score_opus":0.04694571135721827,"score_gpt":0.2803901673155984,"score_spread":0.23344445595838015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760922128","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026275568,0.0038652697,0.0013172401,0.94532245,0.008698914,0.00003990009,0.00020913851,0.000110353794,0.014161125],"genre_scores_gemma":[0.41608107,0.008771588,0.00501337,0.5087735,0.046831522,0.000086368156,0.00030597113,0.0001400456,0.013996585],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992994,0.00023423354,0.00011859233,0.00008465863,0.00014973972,0.00011325909],"domain_scores_gemma":[0.9972383,0.0017472488,0.00020670466,0.00012953368,0.00044817055,0.00022995909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010882149,0.0003045825,0.0005453512,0.00044498715,0.00095267635,0.0011367486,0.0006357572,0.011131032,0.0050513204],"category_scores_gemma":[0.013482882,0.0002659984,0.00045799583,0.00027727202,0.0011796487,0.0016622832,0.00054973824,0.0065453458,0.0034153683],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003676472,0.00010997099,0.042307537,0.00033963943,0.00005724098,0.36362725,0.0009763385,0.0006973552,0.0044835224,0.0072106295,0.51698875,0.06283408],"study_design_scores_gemma":[0.00018089122,0.00023691506,0.01447731,0.00072389137,0.000113960414,0.4634287,0.004222729,0.0033616002,0.0046101403,0.037502162,0.47100317,0.00013849373],"about_ca_topic_score_codex":0.0014716359,"about_ca_topic_score_gemma":0.001718991,"teacher_disagreement_score":0.011131032,"about_ca_system_score_codex":0.0012830988,"about_ca_system_score_gemma":0.0006160658,"threshold_uncertainty_score":0.016898334},"labels":[],"label_agreement":null},{"id":"W2769514698","doi":"10.1038/modpathol.2017.159","title":"Extrauterine high-grade serous carcinomas with bilateral adnexal involvement as the only two disease sites are clonal based on tp53 sequencing results: implications for biology, classification, and staging","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency","funders":"Queen's University","keywords":"Serous carcinoma; Serous fluid; Pathology; Fallopian tube; Cystadenocarcinoma; Ovarian carcinoma; Serous membrane; Stage (stratigraphy); Carcinoma; Medicine; Biology; Adenocarcinoma; Ovarian cancer; Gynecology; Cancer; Internal medicine","score_opus":0.08415963042589442,"score_gpt":0.33764069872669655,"score_spread":0.25348106830080214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2769514698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962788,0.000707444,0.0006143821,0.00008329127,0.000012344184,0.000009110698,0.00009011089,0.000018558563,0.002185868],"genre_scores_gemma":[0.99883,0.00020838516,0.00070890924,0.000027646633,0.000015780348,0.000002791854,0.000060053797,0.000005167645,0.00014122708],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995109,0.000119596785,0.00007273835,0.00007513812,0.000118971235,0.00010272612],"domain_scores_gemma":[0.997757,0.00090408215,0.0005987552,0.000287749,0.0001982179,0.00025411588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007766615,0.00033449283,0.00028774815,0.0008698724,0.00034421138,0.0012855123,0.00032437834,0.0005456273,0.002364182],"category_scores_gemma":[0.0043108547,0.00025114394,0.00017259954,0.0006987149,0.00063437695,0.0006989254,0.00065592414,0.00033235925,0.0003567274],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083427865,0.000061827006,0.8593333,0.000107704895,0.00006083782,0.013193171,0.00037709286,0.0005208365,0.08535916,0.0008376997,0.0002815716,0.03903252],"study_design_scores_gemma":[0.00006404648,0.0002074811,0.87296236,0.00008750977,0.00013722364,0.09909908,0.0009007086,0.0023842233,0.018970858,0.0018182812,0.0033417773,0.000026434473],"about_ca_topic_score_codex":0.00043414955,"about_ca_topic_score_gemma":0.001380151,"teacher_disagreement_score":0.002364182,"about_ca_system_score_codex":0.00022280203,"about_ca_system_score_gemma":0.00025456893,"threshold_uncertainty_score":0.007909},"labels":[],"label_agreement":null},{"id":"W2772138647","doi":"10.1038/modpathol.2017.162","title":"ZC3H7B-BCOR high-grade endometrial stromal sarcomas: a report of 17 cases of a newly defined entity","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":174,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Endometrial stromal sarcoma; Pathology; Nuclear atypia; Leiomyosarcoma; Hematopathology; Sarcoma; Stromal cell; Fluorescence in situ hybridization; Medicine; Polysomy; Immunohistochemistry; Biology; Cytogenetics; Chromosome","score_opus":0.04787341667507823,"score_gpt":0.31830606776606163,"score_spread":0.2704326510909834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2772138647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890593,0.0028226448,0.0021196099,0.00018753622,0.00008154328,0.00014032236,0.00026830193,0.000078772515,0.005241869],"genre_scores_gemma":[0.9969825,0.0006507605,0.0011699616,0.000094666895,0.000112080044,0.00004097183,0.00025068197,0.000023384062,0.0006749247],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9991647,0.00007677243,0.00011591959,0.00021308455,0.00013705206,0.0002924782],"domain_scores_gemma":[0.99780005,0.00048359146,0.0005964227,0.0003387628,0.00016346252,0.0006177907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052204716,0.0017471645,0.0007645528,0.002229484,0.0014019028,0.0014378409,0.0010798969,0.0021165453,0.002640742],"category_scores_gemma":[0.0028977038,0.0010136749,0.00069435936,0.0016065004,0.0021755043,0.0010225899,0.002123452,0.0010804326,0.0013202715],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019235272,0.00006139296,0.078604005,0.00008682271,0.000043735035,0.9090226,0.00040600315,0.00015071568,0.006423922,0.00030379885,0.00037634443,0.004328275],"study_design_scores_gemma":[0.000031536736,0.00009636464,0.043138746,0.000019895964,0.00006491903,0.95179963,0.00040122538,0.00038345612,0.0021436946,0.00024804642,0.0016526637,0.000019852429],"about_ca_topic_score_codex":0.0011649983,"about_ca_topic_score_gemma":0.0016432225,"teacher_disagreement_score":0.002640742,"about_ca_system_score_codex":0.0006279211,"about_ca_system_score_gemma":0.0004918993,"threshold_uncertainty_score":0.008834183},"labels":[],"label_agreement":null},{"id":"W2775215419","doi":"10.1038/modpathol.2017.151","title":"Development of a novel histologic diagnostic algorithm for hepatic graft-versus-host disease","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Liver physiology and pathology","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Pathology; Host (biology); Medicine; Graft-versus-host disease; Disease; Algorithm; Computer science; Biology","score_opus":0.06526874458465338,"score_gpt":0.31938127615949036,"score_spread":0.254112531574837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2775215419","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.102915995,0.0021034672,0.8775698,0.0029515917,0.0005424603,0.0012149868,0.0008819413,0.0046321517,0.0071876617],"genre_scores_gemma":[0.18272702,0.0007312837,0.8126097,0.00041301953,0.0002741749,0.00036595913,0.0012308334,0.00017494359,0.0014731264],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986993,0.0002530998,0.00023459618,0.00030660932,0.00040225356,0.00010416886],"domain_scores_gemma":[0.99606365,0.00063368824,0.0003708912,0.00025588993,0.0024381771,0.00023756512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032470792,0.0011738165,0.00095281017,0.005624062,0.00085216144,0.003139242,0.0019487166,0.0011709426,0.0022484215],"category_scores_gemma":[0.0067082816,0.0005938454,0.00095827994,0.0010790079,0.00049871224,0.0022941171,0.0015449226,0.0015838841,0.0014822545],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047604187,0.00043357024,0.1958986,0.00037651067,0.00027431286,0.00137727,0.00023289901,0.013326367,0.02903612,0.008103837,0.01870868,0.73175573],"study_design_scores_gemma":[0.00029889628,0.0008649931,0.0997987,0.00056450267,0.0009388668,0.021409336,0.0008516666,0.74683404,0.052672587,0.025138268,0.050411046,0.00021711783],"about_ca_topic_score_codex":0.0021845857,"about_ca_topic_score_gemma":0.003658885,"teacher_disagreement_score":0.005624062,"about_ca_system_score_codex":0.0011876951,"about_ca_system_score_gemma":0.0025095278,"threshold_uncertainty_score":0.017172396},"labels":[],"label_agreement":null},{"id":"W2781503911","doi":"10.1038/modpathol.2017.136","title":"Benign mimics of prostatic adenocarcinoma","year":2018,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; Rockyview General Hospital; University of Calgary","funders":"","keywords":"Medicine; Prostate; Overdiagnosis; Pathology; Adenocarcinoma; Prostatectomy; Biopsy; Surgical pathology; Carcinoma; Cancer; Internal medicine","score_opus":0.07789059224442,"score_gpt":0.3579946011027893,"score_spread":0.2801040088583693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2781503911","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005425002,0.9959649,0.000255172,0.00036889355,0.00029635493,0.000008583185,0.000036784895,0.000015254892,0.0025114813],"genre_scores_gemma":[0.0077087767,0.9882261,0.0006424909,0.0010348955,0.0010382483,0.000008427049,0.00011171719,0.000006382288,0.0012228212],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995571,0.00007438482,0.000094819705,0.000078287056,0.0001505222,0.0000448827],"domain_scores_gemma":[0.99940705,0.0003019384,0.0001380442,0.00002100624,0.00008239647,0.000049436494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030620335,0.00077932037,0.0010314588,0.0032783756,0.00037496287,0.0016978913,0.00082685705,0.00095870363,0.0034343696],"category_scores_gemma":[0.0018469865,0.0003418506,0.0005599873,0.0023278897,0.000822335,0.0015627124,0.0010130048,0.001514997,0.001522175],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091303475,0.000049363487,0.003026253,0.022429654,0.00016890322,0.009921061,0.0002341204,0.00041642165,0.0014953426,0.0023288291,0.034298744,0.92554003],"study_design_scores_gemma":[0.000035275727,0.00006391027,0.0072276797,0.01553219,0.00054534164,0.13433677,0.00048615693,0.00022012602,0.0009264453,0.0035167702,0.8370324,0.00007686711],"about_ca_topic_score_codex":0.001281048,"about_ca_topic_score_gemma":0.0026667668,"teacher_disagreement_score":0.0034343696,"about_ca_system_score_codex":0.000469006,"about_ca_system_score_gemma":0.0012655032,"threshold_uncertainty_score":0.011489093},"labels":[],"label_agreement":null},{"id":"W2782456402","doi":"10.1038/modpathol.2017.158","title":"Treatment effects in prostate cancer","year":2018,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":178,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"","keywords":"Medicine; Radiation therapy; Prostate cancer; Disease; Androgen deprivation therapy; Ablative case; Clinical trial; Cancer; Chemotherapy; Oncology; Intensive care medicine; Surgery; Internal medicine","score_opus":0.07310665826743193,"score_gpt":0.4227359725410714,"score_spread":0.3496293142736395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782456402","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000035174373,0.99946326,0.000020937898,0.00010001238,0.00006468015,0.0000029781397,0.00001672025,0.0000018466894,0.00029443894],"genre_scores_gemma":[0.00053395063,0.998923,0.00005301294,0.00022521573,0.00008896227,0.0000033649046,0.000018588627,7.59392e-7,0.000153138],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994386,0.00013275619,0.00013137232,0.00008582304,0.00016939567,0.000041955773],"domain_scores_gemma":[0.9986571,0.000903126,0.00022374753,0.000027552756,0.00014537954,0.00004311372],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012600032,0.0010008366,0.0024481693,0.0032735127,0.00035403194,0.0017664732,0.001173815,0.0013128545,0.007879077],"category_scores_gemma":[0.0029235638,0.0005399133,0.0014996757,0.0032614213,0.00074827863,0.0015010822,0.0010237308,0.0022821582,0.0012902262],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014488526,0.0000721928,0.00034069788,0.10357433,0.0005550298,0.00013854072,0.00008739854,0.00034719912,0.00035472208,0.0023677903,0.020409703,0.87160754],"study_design_scores_gemma":[0.0001231462,0.0002576726,0.0027206023,0.058130883,0.002343317,0.001591995,0.00015729021,0.00012490558,0.00034448516,0.0029844427,0.93116415,0.000057190413],"about_ca_topic_score_codex":0.0027673538,"about_ca_topic_score_gemma":0.006591957,"teacher_disagreement_score":0.007879077,"about_ca_system_score_codex":0.0009343166,"about_ca_system_score_gemma":0.0022669684,"threshold_uncertainty_score":0.026358128},"labels":[],"label_agreement":null},{"id":"W2784100755","doi":"10.1038/modpathol.2017.191","title":"Epithelioid fibrous histiocytoma: molecular characterization of ALK fusion partners in 23 cases","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":97,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Fusion gene; Immunohistochemistry; Pathology; ETV6; Biology; Medicine; Gene; Chromosomal translocation","score_opus":0.0172236995393507,"score_gpt":0.33157842855234476,"score_spread":0.31435472901299405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784100755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497485,0.0021654642,0.00083389203,0.00007846674,0.00001959479,0.000042325675,0.00021411096,0.000026411994,0.0016448983],"genre_scores_gemma":[0.99820566,0.0007084547,0.00046152217,0.000032599044,0.000019212262,0.00002206456,0.00021561299,0.000012188276,0.00032286602],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991648,0.00006294006,0.00012119953,0.00019768166,0.00021600506,0.00023739654],"domain_scores_gemma":[0.9992434,0.00018239973,0.00014922625,0.00009348106,0.00011549371,0.00021595243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006445668,0.0009793101,0.0005688911,0.0032486646,0.0012172457,0.0014183464,0.001020582,0.00097330817,0.0020887572],"category_scores_gemma":[0.0022512753,0.0006751762,0.00082956627,0.0015006935,0.0016240923,0.0006179128,0.0011582369,0.0004893731,0.0007225406],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007714254,0.00018899796,0.47406572,0.00018827774,0.00022309089,0.45123595,0.0024517754,0.0005971708,0.044516545,0.00034010323,0.000631192,0.02478971],"study_design_scores_gemma":[0.000075790784,0.00039200476,0.3612494,0.00009943082,0.0005699772,0.6043509,0.0032867796,0.0011166058,0.020749126,0.00054964697,0.007478967,0.000081385966],"about_ca_topic_score_codex":0.002011812,"about_ca_topic_score_gemma":0.002018405,"teacher_disagreement_score":0.0032486646,"about_ca_system_score_codex":0.000743609,"about_ca_system_score_gemma":0.0005160032,"threshold_uncertainty_score":0.0069875717},"labels":[],"label_agreement":null},{"id":"W2785836040","doi":"10.1038/modpathol.2017.183","title":"The histologic risk model is a useful and inexpensive tool to assess risk of recurrence and death in stage I or II squamous cell carcinoma of tongue and floor of mouth","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Head and Neck Cancer Studies","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen Elizabeth II Health Sciences Centre; Dalhousie University","funders":"","keywords":"Medicine; Perineural invasion; Tongue; Stage (stratigraphy); Floor of mouth; Proportional hazards model; Internal medicine; Univariate analysis; Odds ratio; Basal cell; Cancer; Carcinoma; Oncology; Surgery; Pathology; Multivariate analysis","score_opus":0.05945102319055129,"score_gpt":0.31232652890570195,"score_spread":0.25287550571515066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2785836040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8734233,0.0018301309,0.10870083,0.0013902477,0.0002441804,0.00026913025,0.0046211043,0.00060760183,0.008913551],"genre_scores_gemma":[0.98228997,0.0003408644,0.014146478,0.0000807914,0.000058644626,0.00007803866,0.0012252111,0.000052236723,0.0017277694],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989849,0.0005474102,0.00008303876,0.00009735194,0.00023952904,0.000047909594],"domain_scores_gemma":[0.99359787,0.0039313575,0.0011067974,0.0006244531,0.000552039,0.00018750556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031277328,0.0005932474,0.0006145566,0.0017067014,0.0002861982,0.00097447267,0.0005128344,0.00030337027,0.0034950732],"category_scores_gemma":[0.012189378,0.0001843657,0.0011795195,0.0007179473,0.00015705872,0.00091659266,0.0005489392,0.00061640993,0.0007089623],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069185445,0.00013756014,0.922625,0.00006594627,0.0006265908,0.00016203492,0.00005800085,0.01529606,0.00060409104,0.0013477559,0.0017134361,0.056671664],"study_design_scores_gemma":[0.00016180593,0.0032185905,0.687124,0.00013104682,0.001993888,0.0031688693,0.0005373498,0.27875596,0.0021549182,0.013468638,0.009167608,0.00011733525],"about_ca_topic_score_codex":0.004106599,"about_ca_topic_score_gemma":0.0051015075,"teacher_disagreement_score":0.004106599,"about_ca_system_score_codex":0.00052913063,"about_ca_system_score_gemma":0.00084622944,"threshold_uncertainty_score":0.016541243},"labels":[],"label_agreement":null},{"id":"W2787971552","doi":"10.1038/s41379-018-0016-8","title":"Epidemiology and biomarker profile of pituitary adenohypophysial tumors","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":176,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Toronto; University Health Network","funders":"","keywords":"Corticotropic cell; Prolactin; Pituitary tumors; Pathology; Somatotropic cell; Internal medicine; Medicine; Population; Null cell; Pituitary adenoma; Endocrinology; Biology; Adenoma; Oncology; Hormone; Pituitary gland","score_opus":0.03532926294939782,"score_gpt":0.30591657631642205,"score_spread":0.27058731336702424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787971552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9871476,0.00910284,0.00046985695,0.00038383497,0.000036726135,0.000007717814,0.0014152316,0.000015269996,0.001420984],"genre_scores_gemma":[0.9962502,0.0022933872,0.00020216848,0.000058261794,0.000041987016,0.000006448805,0.00088328245,0.000004800221,0.00025932078],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996861,0.00004861943,0.00004398167,0.000093469156,0.000064436324,0.000063343876],"domain_scores_gemma":[0.9991628,0.000120946774,0.00043830948,0.000044708333,0.000115488365,0.000117731244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033435668,0.00017266111,0.00029538487,0.0012184202,0.00029824607,0.0007676968,0.00027004885,0.00031033374,0.0010716746],"category_scores_gemma":[0.0011287723,0.00017120123,0.0003997588,0.0018578272,0.00027953667,0.00065197557,0.00036820228,0.0006189549,0.00020794416],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001324705,0.00002419095,0.9927423,0.000031992622,0.00009008212,0.00016149148,0.00004185733,0.00007212083,0.0010822042,0.000165245,0.00023800613,0.0052180346],"study_design_scores_gemma":[0.0000026752439,0.00006274336,0.9963414,0.000017345894,0.000058444046,0.001579535,0.0002635155,0.00018908136,0.00022047214,0.00033719066,0.00091944204,0.00000811199],"about_ca_topic_score_codex":0.0023310648,"about_ca_topic_score_gemma":0.0016672997,"teacher_disagreement_score":0.0023310648,"about_ca_system_score_codex":0.00036932091,"about_ca_system_score_gemma":0.0005548452,"threshold_uncertainty_score":0.004635036},"labels":[],"label_agreement":null},{"id":"W2788216924","doi":"10.1038/s41379-018-0007-9","title":"TERT promoter mutation in adult granulosa cell tumor of the ovary","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Terry Fox Research Institute; University of British Columbia; Cancer Research UK","keywords":"Telomerase; Biology; Telomerase reverse transcriptase; Carcinogenesis; Granulosa cell; Cancer research; Telomere; Somatic cell; Ovarian cancer; Mutation; Ovary; Cancer; Gene; Genetics","score_opus":0.01094014582912017,"score_gpt":0.245585373253755,"score_spread":0.23464522742463484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788216924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99894124,0.00034262202,0.00018090314,0.000053113043,0.0000070231445,0.000003849151,0.000032194755,0.000009788908,0.0004292749],"genre_scores_gemma":[0.99958104,0.00012657292,0.000097736935,0.000009812625,0.000006785685,9.704562e-7,0.000016646052,0.0000013109377,0.00015903517],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9999511,0.000004850631,0.000007492583,0.000012096216,0.000009720501,0.000014587983],"domain_scores_gemma":[0.99979216,0.000051818093,0.00007096608,0.000019943143,0.000013137111,0.000052070493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010171496,0.00011379117,0.00016251885,0.00048303406,0.00020767408,0.00017999677,0.00013469202,0.00034683556,0.00082398223],"category_scores_gemma":[0.0003509859,0.00011269126,0.00014085918,0.00026141404,0.0002659999,0.00014157231,0.00014939059,0.0001980278,0.000113741924],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018472058,0.00009936737,0.26780772,0.00015875969,0.000069969705,0.3894929,0.00067489955,0.0005758574,0.31813952,0.0014137113,0.00052609976,0.019193994],"study_design_scores_gemma":[0.00013459168,0.00043135002,0.45168257,0.00002714514,0.00016018651,0.48588178,0.0004162894,0.0018123168,0.055322647,0.0012897411,0.0028147504,0.000026637275],"about_ca_topic_score_codex":0.00055907405,"about_ca_topic_score_gemma":0.00045993918,"teacher_disagreement_score":0.00082398223,"about_ca_system_score_codex":0.00016547297,"about_ca_system_score_gemma":0.00015836282,"threshold_uncertainty_score":0.0027564764},"labels":[],"label_agreement":null},{"id":"W2791043379","doi":"10.1038/s41379-018-0043-5","title":"Programmed cell death ligand-1 expression in tumor and immune cells is associated with better patient outcome and decreased tumor-infiltrating lymphocytes in uveal melanoma","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Fondation du cancer des Cèdres; Mitacs","keywords":"Immune system; Melanoma; Medicine; Tumor M2-PK; Metastasis; Tumor-infiltrating lymphocytes; Cell; Tumor microenvironment; PD-L1; Cancer research; Univariate analysis; T cell; Pathology; Immunotherapy; Cancer; Immunology; Internal medicine; Biology; Multivariate analysis; Tumor marker","score_opus":0.012818267127723337,"score_gpt":0.2524239559055856,"score_spread":0.23960568877786226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791043379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993237,0.0003735535,0.00006447547,0.00002154671,0.000003227034,0.0000013092697,0.00003266258,0.0000032649614,0.00017629196],"genre_scores_gemma":[0.9996118,0.00006579959,0.00006279761,0.000012149677,0.0000061837372,0.0000020701689,0.000050460734,0.000001194724,0.00018754216],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998165,0.000047310565,0.000023590657,0.000041261937,0.000033658198,0.000037797443],"domain_scores_gemma":[0.99938595,0.00012730708,0.0003234362,0.000031581352,0.00004985312,0.00008182975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025638138,0.00013846584,0.00021509107,0.00047781557,0.00022809114,0.0004998313,0.00017451606,0.00025161513,0.0012180876],"category_scores_gemma":[0.00081778475,0.00011021467,0.00013777702,0.00037085067,0.00020953438,0.00024182047,0.00020650713,0.00039978148,0.00012383849],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015560855,0.000100644254,0.95274824,0.00005293711,0.00006651329,0.0004489868,0.00011344729,0.00013748556,0.032920767,0.00008132764,0.00013054503,0.011643078],"study_design_scores_gemma":[0.000019071222,0.00030920727,0.99196106,0.000008725331,0.00006981334,0.0019236826,0.00017534358,0.00048574826,0.004380495,0.00014688123,0.0005123728,0.0000074867526],"about_ca_topic_score_codex":0.00027219043,"about_ca_topic_score_gemma":0.00041360836,"teacher_disagreement_score":0.0012180876,"about_ca_system_score_codex":0.00021409566,"about_ca_system_score_gemma":0.00012622289,"threshold_uncertainty_score":0.0040748715},"labels":[],"label_agreement":null},{"id":"W2791702110","doi":"10.1038/s41379-018-0031-9","title":"The genetics of recurrent hydatidiform moles: new insights and lessons from a comprehensive analysis of 113 patients","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gestational Trophoblastic Disease Studies","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Université de Montréal; Hôpital Notre-Dame; McGill University Health Centre","funders":"IWK Health Centre; McGill University; Faculty of Medicine, McGill University; Génome Québec; Canadian Institutes of Health Research; McGill University Health Centre","keywords":"Partial Hydatidiform Mole; Ploidy; Genotype; Biology; Mole; Etiology; Mutation; Molar pregnancy; Genetics; Pregnancy; Gynecology; Pathology; Gene; Medicine; Fetus; Placenta; Gestation","score_opus":0.03072206560740142,"score_gpt":0.30616817103400057,"score_spread":0.27544610542659914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791702110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969739,0.0011627515,0.0006566639,0.00008898034,0.0000031672848,0.000013385478,0.00035600472,0.000011948034,0.00073317456],"genre_scores_gemma":[0.9977126,0.0010628537,0.0006108763,0.00004239271,0.000009152813,0.000011299888,0.00040193147,0.000015100068,0.00013367251],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99897456,0.00027644215,0.00012074548,0.00026181177,0.00023332349,0.0001332082],"domain_scores_gemma":[0.9983765,0.0007053774,0.00031554882,0.00028904076,0.00014348155,0.00017007686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001058013,0.00045271555,0.0006881098,0.0021939937,0.0008308079,0.00082781404,0.00072836026,0.00048825023,0.0015877207],"category_scores_gemma":[0.0036775707,0.00039674234,0.0004457044,0.0023629304,0.0007391238,0.00054890837,0.0011757491,0.00047850108,0.00025426183],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016338592,0.000043656153,0.9638026,0.00006149791,0.0002112569,0.0054352935,0.0025972992,0.00029223436,0.0068461047,0.0004237472,0.00033117615,0.01979181],"study_design_scores_gemma":[0.000011473621,0.00015442913,0.9757213,0.000066821,0.00028011092,0.01759641,0.0016269294,0.00024946107,0.0015547855,0.00037444005,0.0023381824,0.000025615092],"about_ca_topic_score_codex":0.0043638567,"about_ca_topic_score_gemma":0.0038514081,"teacher_disagreement_score":0.0043638567,"about_ca_system_score_codex":0.00036365143,"about_ca_system_score_gemma":0.00053935574,"threshold_uncertainty_score":0.008676946},"labels":[],"label_agreement":null},{"id":"W2791741850","doi":"10.1038/s41379-018-0008-8","title":"MYB and MYBL1 in adenoid cystic carcinoma: diversity in the mode of genomic rearrangement and transcripts","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science","keywords":"Adenoid cystic carcinoma; MYB; Locus (genetics); Biology; Pathology; Gene rearrangement; Gene duplication; Molecular biology; Gene; Carcinoma; Gene expression; Genetics; Medicine","score_opus":0.031095282621073594,"score_gpt":0.2696407291750438,"score_spread":0.2385454465539702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791741850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99337536,0.0025433097,0.0019095371,0.00017261555,0.000012841107,0.000011687179,0.00024101189,0.000025915122,0.0017078075],"genre_scores_gemma":[0.9975229,0.0006450605,0.0009095081,0.000047942427,0.00001280795,0.000012488508,0.00019302971,0.000009844885,0.0006462749],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997265,0.00004641211,0.000023176895,0.000082303806,0.00006050822,0.00006117904],"domain_scores_gemma":[0.9997366,0.00009988291,0.00006510094,0.000035228044,0.0000293217,0.00003389806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044445216,0.00012942987,0.00015939692,0.000928269,0.00021572469,0.0005416669,0.00022745093,0.00039441406,0.0017000416],"category_scores_gemma":[0.00080004096,0.00015316113,0.00014856028,0.0005206225,0.000418977,0.00049226964,0.0004794453,0.00036828776,0.00034092544],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008145955,0.000027477212,0.08740224,0.00010053248,0.00005260359,0.0022042142,0.00092314347,0.0003531586,0.87298936,0.0015135783,0.00016945995,0.033449773],"study_design_scores_gemma":[0.00007839325,0.00057997205,0.7075639,0.000096038966,0.00019020868,0.03640851,0.0026296542,0.0030603404,0.22600995,0.0046756007,0.01864975,0.000057732595],"about_ca_topic_score_codex":0.000256107,"about_ca_topic_score_gemma":0.00026677607,"teacher_disagreement_score":0.0017000416,"about_ca_system_score_codex":0.00017915895,"about_ca_system_score_gemma":0.00012182976,"threshold_uncertainty_score":0.005687237},"labels":[],"label_agreement":null},{"id":"W2792125604","doi":"10.1038/s41379-018-0032-8","title":"Fibroepithelial lesions of the breast: a comprehensive morphological and outcome analysis of a large series","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; Markham Stouffville Hospital; Health Sciences Centre; Sunnybrook Hospital; University of Toronto; North York General Hospital; Sunnybrook Health Science Centre","funders":"","keywords":"Medicine; Phyllodes tumor; Fibroadenoma; Mitotic index; Pathology; Nuclear atypia; Proliferative index; Atypia; Hematopathology; Retrospective cohort study; Immunohistochemistry; Radiology; Internal medicine; Breast cancer; Mitosis; Biology; Cancer; Cytogenetics","score_opus":0.029657820530210936,"score_gpt":0.296134241692797,"score_spread":0.2664764211625861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792125604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898297,0.00042185665,0.0001296783,0.000011700636,0.0000014674658,0.000011428719,0.00022737253,0.0000038681346,0.00020975602],"genre_scores_gemma":[0.99821544,0.00048163647,0.0002006391,0.000022624765,0.000014996529,0.000014375046,0.0009148824,0.000005932235,0.00012958978],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994136,0.00009263395,0.00008682085,0.00017148186,0.00013141627,0.00010398283],"domain_scores_gemma":[0.99894744,0.00024271883,0.00029444898,0.00016797737,0.00012433047,0.00022304613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064335414,0.0004184812,0.0005947494,0.0029545156,0.0007724528,0.00074488984,0.00038045642,0.00042739324,0.0011762354],"category_scores_gemma":[0.0013276485,0.0004012285,0.00064398226,0.0020123003,0.0005888091,0.0007955378,0.0010241757,0.0003289783,0.00040396783],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013172874,0.00009206626,0.9927396,0.00001929024,0.00007243523,0.0017586905,0.00017356468,0.000046572975,0.0012003451,0.000020617183,0.00010316823,0.0036418468],"study_design_scores_gemma":[0.000006238272,0.00011094001,0.9919566,0.000009079767,0.000071617666,0.0068086633,0.0004302717,0.00009108956,0.00022730525,0.000021735348,0.00025802787,0.000008396955],"about_ca_topic_score_codex":0.0013859128,"about_ca_topic_score_gemma":0.001906435,"teacher_disagreement_score":0.0029545156,"about_ca_system_score_codex":0.00035891947,"about_ca_system_score_gemma":0.0005577554,"threshold_uncertainty_score":0.00393492},"labels":[],"label_agreement":null},{"id":"W2794376949","doi":"10.1038/s41379-018-0028-4","title":"Tumor budding as a standardized parameter in gastrointestinal carcinomas: more than just the colon","year":2018,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Gastric Cancer Management and Outcomes","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; University of British Columbia Hospital","funders":"","keywords":"Tumor budding; Adenocarcinoma; Pathology; Budding; Medicine; Colorectal cancer; Carcinoma; Cytopathology; Internal medicine; Biology; Cancer; Metastasis; Cytology","score_opus":0.06912056711201865,"score_gpt":0.36043807032868236,"score_spread":0.2913175032166637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794376949","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041767824,0.9983113,0.00018975988,0.0004241291,0.00018171227,0.0000045315624,0.000039840023,0.000006200567,0.00042487477],"genre_scores_gemma":[0.0065967287,0.99119484,0.000677545,0.00061806827,0.00045439982,0.000009189122,0.00014954721,0.000006087446,0.00029353652],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.99888045,0.00022599056,0.00024714746,0.00018961455,0.0003980885,0.00005864234],"domain_scores_gemma":[0.9974509,0.0014657968,0.0004215418,0.00006877793,0.0005014519,0.00009153994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017937901,0.00064438436,0.0022287702,0.0031069887,0.00023917435,0.002088316,0.001135629,0.0011617353,0.0015438888],"category_scores_gemma":[0.005621044,0.00028427472,0.0010532471,0.0034647025,0.00086889166,0.0023370406,0.0009187011,0.0017416453,0.0006141725],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013517088,0.000042597057,0.007775933,0.029129803,0.00044064375,0.00034261335,0.00018035225,0.00035080395,0.00083159277,0.0024650502,0.019616716,0.93868876],"study_design_scores_gemma":[0.000052607786,0.00028092787,0.028268551,0.04746379,0.0024546257,0.010053489,0.0009968034,0.00063548033,0.0014440373,0.005762224,0.90243316,0.00015431132],"about_ca_topic_score_codex":0.0017329504,"about_ca_topic_score_gemma":0.0029754075,"teacher_disagreement_score":0.0031069887,"about_ca_system_score_codex":0.0007532355,"about_ca_system_score_gemma":0.002067543,"threshold_uncertainty_score":0.009486556},"labels":[],"label_agreement":null},{"id":"W2803245877","doi":"10.1038/s41379-018-0066-y","title":"Glypican-1 immunohistochemistry does not separate mesothelioma from pulmonary adenocarcinoma","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Mesothelioma; Medicine; Adenocarcinoma; Pathology; Immunohistochemistry; Glypican 3; Pulmonary adenocarcinoma; Staining; Cancer; Internal medicine","score_opus":0.01147459338021574,"score_gpt":0.2679410994852147,"score_spread":0.256466506104999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803245877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99148905,0.0017401546,0.0011806273,0.00016598866,0.000048315134,0.000023030512,0.00007077653,0.000045972225,0.0052360124],"genre_scores_gemma":[0.99822026,0.0003154125,0.0009827755,0.00004306191,0.000019374884,0.0000064458873,0.00007477093,0.000006927586,0.00033098512],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995968,0.000066981534,0.000060785605,0.00006492506,0.00010854327,0.00010200062],"domain_scores_gemma":[0.9992774,0.0002275146,0.00015577507,0.000103006496,0.00012070736,0.000115645336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075921934,0.00041778904,0.00026404342,0.0013975644,0.00032298383,0.0005877292,0.00040937308,0.00063594687,0.0012823849],"category_scores_gemma":[0.0011693521,0.0002723932,0.00030299363,0.00038892514,0.00063196884,0.00062788604,0.00051158917,0.0004448131,0.0005944785],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009277005,0.000051441755,0.23387288,0.00030569072,0.00015389077,0.013945536,0.00032852174,0.00021875314,0.7333053,0.00045657723,0.000421599,0.016012214],"study_design_scores_gemma":[0.00008729707,0.00044744654,0.66853386,0.00012989996,0.0004195838,0.102199666,0.0013374978,0.0043166294,0.21111757,0.0017648484,0.009614046,0.0000316097],"about_ca_topic_score_codex":0.00095795724,"about_ca_topic_score_gemma":0.0019940853,"teacher_disagreement_score":0.0013975644,"about_ca_system_score_codex":0.00030729626,"about_ca_system_score_gemma":0.0002586527,"threshold_uncertainty_score":0.0042900443},"labels":[],"label_agreement":null},{"id":"W2804202266","doi":"10.1038/s41379-018-0050-6","title":"Duplications of KIAA1549 and BRAF screening by Droplet Digital PCR from formalin-fixed paraffin-embedded DNA is an accurate alternative for KIAA1549-BRAF fusion detection in pilocytic astrocytomas","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National de la Santé et de la Recherche Médicale; Advanced Remanufacturing and Technology Centre; Groupement des Entreprises Françaises dans la lutte contre le Cancer; Institute of Cancer Research; Institut National Du Cancer; Direction Générale de l’offre de Soins","keywords":"Pilocytic astrocytoma; Glioma; Fusion gene; Ganglioglioma; Oligodendroglioma; Pathology; Astrocytoma; Fusion transcript; Medicine; Cancer research; Biology; Gene; Genetics","score_opus":0.030814144952791372,"score_gpt":0.29597258362093104,"score_spread":0.26515843866813965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804202266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9432432,0.0037370685,0.041496027,0.0010011449,0.00028312125,0.00015945904,0.0009829033,0.0010112468,0.008085817],"genre_scores_gemma":[0.9610223,0.0011075711,0.035076845,0.0002794616,0.000046932073,0.00006770992,0.0005780329,0.000100588215,0.0017205318],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99876523,0.00020817938,0.00016292493,0.000263255,0.00048471752,0.00011580619],"domain_scores_gemma":[0.9986369,0.00058860006,0.00018818477,0.00020307941,0.00028918148,0.00009406066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001080832,0.00045841778,0.00036106457,0.0030078897,0.00032510806,0.00095463067,0.0006383586,0.0007935809,0.0022074403],"category_scores_gemma":[0.0031505553,0.00056124356,0.00029959492,0.0006848312,0.000631842,0.0009162032,0.00057454326,0.0006764902,0.0012263007],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007951844,0.00011111674,0.10064882,0.00023064623,0.000086783664,0.0075053847,0.00034930254,0.00064078113,0.81776386,0.0011079119,0.0010927344,0.069667466],"study_design_scores_gemma":[0.00005979642,0.00067480386,0.137677,0.00015680272,0.00022955803,0.0495146,0.000764955,0.013829983,0.7831242,0.0031277675,0.010775693,0.00006478966],"about_ca_topic_score_codex":0.0006094385,"about_ca_topic_score_gemma":0.0016165151,"teacher_disagreement_score":0.0030078897,"about_ca_system_score_codex":0.0004093514,"about_ca_system_score_gemma":0.00033484728,"threshold_uncertainty_score":0.0073845983},"labels":[],"label_agreement":null},{"id":"W2804869372","doi":"10.1038/s41379-018-0080-0","title":"Nuclear β-catenin localization and mutation of the CTNNB1 gene: a context-dependent association","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":128,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"National Cancer Institute","keywords":"Exon; Immunohistochemistry; Catenin; Wnt signaling pathway; Mutation; Cancer research; Biology; Pathology; Cancer; Endometrial cancer; Medicine; Gene; Genetics","score_opus":0.015729696749806465,"score_gpt":0.2609510778487021,"score_spread":0.24522138109889563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804869372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951266,0.0027591516,0.0007072487,0.00014741867,0.0000314833,0.000007576918,0.00014061396,0.000015413589,0.0010645404],"genre_scores_gemma":[0.998858,0.0003592159,0.00020394778,0.000025445901,0.000010770619,0.0000034145964,0.00005732463,0.0000065218674,0.00047551014],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99977344,0.00004629873,0.000018786293,0.00008619825,0.00004614885,0.000029092453],"domain_scores_gemma":[0.9995419,0.00010799947,0.00018141059,0.000042176187,0.00004360511,0.00008303626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018456075,0.00020894603,0.0001961273,0.0004177502,0.00025201798,0.00033882467,0.00023024138,0.0003786352,0.0031790696],"category_scores_gemma":[0.00062468485,0.00019216392,0.00020775391,0.00024205,0.0003976399,0.00020789103,0.0002534706,0.00037467378,0.0003451145],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00162602,0.00012986023,0.1328585,0.00010508702,0.00012723292,0.00309271,0.0001679353,0.00019536409,0.853114,0.0007203282,0.00036346677,0.0074994126],"study_design_scores_gemma":[0.000035817153,0.00028672622,0.9013901,0.000038724473,0.00017795563,0.018979622,0.00020362478,0.0012635352,0.07404412,0.00061300065,0.0029347525,0.000032049324],"about_ca_topic_score_codex":0.00083817303,"about_ca_topic_score_gemma":0.001404829,"teacher_disagreement_score":0.0031790696,"about_ca_system_score_codex":0.00027480422,"about_ca_system_score_gemma":0.00023172706,"threshold_uncertainty_score":0.010635078},"labels":[],"label_agreement":null},{"id":"W2804913927","doi":"10.1038/s41379-018-0068-9","title":"DALM, rest in peace: a pathologist's perspective on dysplasia in inflammatory bowel disease in the post-DALM era","year":2018,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of British Columbia; Mount Sinai Hospital; Vancouver General Hospital","funders":"","keywords":"Medicine; Dysplasia; Inflammatory bowel disease; Disease; Internal medicine; General surgery","score_opus":0.016954338793545368,"score_gpt":0.2999419313783991,"score_spread":0.28298759258485373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804913927","genre_codex":"review","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005069974,0.9952531,0.00009644932,0.0030449089,0.0011136375,0.0000010202605,0.000006806308,0.0000045407114,0.0004287309],"genre_scores_gemma":[0.0011258249,0.99246335,0.00025371317,0.0027429117,0.0027773664,0.0000029878724,0.000017220162,0.0000025536235,0.00061401376],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995184,0.00012371261,0.000074218195,0.00006630346,0.00016237094,0.00005495591],"domain_scores_gemma":[0.9981123,0.0010924975,0.0001668981,0.00004226849,0.0004213586,0.0001646023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015405187,0.0006713178,0.001308574,0.0026927704,0.00055175484,0.001916438,0.0010618985,0.0027749506,0.002466027],"category_scores_gemma":[0.003020075,0.00024479954,0.00046164263,0.0021382307,0.0016008872,0.0031734912,0.0015783643,0.0040821936,0.000994837],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009438918,0.00004233985,0.00071557506,0.0112704085,0.000071384995,0.0010613134,0.00030331014,0.00027931298,0.00082312676,0.014143427,0.13902976,0.83216554],"study_design_scores_gemma":[0.000009035303,0.000035559115,0.00061148807,0.004804688,0.000043171087,0.0028354,0.00022617013,0.00004694645,0.00012943654,0.004332051,0.98690414,0.000021887246],"about_ca_topic_score_codex":0.001223373,"about_ca_topic_score_gemma":0.0031213167,"teacher_disagreement_score":0.0027749506,"about_ca_system_score_codex":0.0010555645,"about_ca_system_score_gemma":0.0020863495,"threshold_uncertainty_score":0.00824964},"labels":[],"label_agreement":null},{"id":"W2810343615","doi":"10.1038/s41379-018-0055-1","title":"Refinement of high-risk endometrial cancer classification using DNA damage response biomarkers: a TransPORTEC initiative","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"National Institute for Health and Care Research","keywords":"RAD51; Microsatellite instability; DNA damage; Biology; Endometrial cancer; Hazard ratio; Homologous recombination; DNA; Oncology; Internal medicine; Cancer research; Microsatellite; Genetics; Cancer; Gene; Medicine","score_opus":0.08256963860650705,"score_gpt":0.3416188361189866,"score_spread":0.2590491975124795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810343615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8532189,0.012064727,0.086219475,0.021721317,0.0011231897,0.0011643831,0.009785803,0.0015124457,0.01318961],"genre_scores_gemma":[0.84970677,0.004434679,0.12472297,0.0022251976,0.00047915138,0.00052319386,0.012608365,0.00034242557,0.004957226],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99847,0.0007366177,0.00018880075,0.00022386503,0.00027123652,0.00010946997],"domain_scores_gemma":[0.98069876,0.0033814972,0.0014236533,0.002801167,0.010522519,0.0011723235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01289935,0.0006423408,0.00075958984,0.0026135547,0.0006926833,0.0021131088,0.0013687798,0.0009018166,0.0031130707],"category_scores_gemma":[0.015683865,0.00029821164,0.0008205719,0.0018049963,0.00027065485,0.001519423,0.0021557894,0.0010924886,0.0009439713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010268245,0.0004366435,0.58011305,0.00042454214,0.00037923345,0.00040865273,0.0004771467,0.00295619,0.006938793,0.001344459,0.0132200485,0.3922743],"study_design_scores_gemma":[0.0005062328,0.0019452664,0.7656317,0.0013575829,0.0013773609,0.0022468432,0.0038627493,0.058281284,0.01837524,0.0070636007,0.13917364,0.00017851719],"about_ca_topic_score_codex":0.020069731,"about_ca_topic_score_gemma":0.018439705,"teacher_disagreement_score":0.020069731,"about_ca_system_score_codex":0.0013040309,"about_ca_system_score_gemma":0.0043163495,"threshold_uncertainty_score":0.068219125},"labels":[],"label_agreement":null},{"id":"W2811253064","doi":"10.1038/s41379-018-0085-8","title":"Correction: TERT promoter mutation in adult granulosa cell tumor of the ovary","year":2018,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"Gynecologic oncology; Center (category theory); Ovary; Gynecology; Medicine; Library science; Pathology; Internal medicine; Computer science; Chemistry","score_opus":0.010062907857929867,"score_gpt":0.2478018072386309,"score_spread":0.23773889938070103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2811253064","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009673932,0.0019161466,0.00075200753,0.054499388,0.9393801,0.000024193194,0.00043291185,0.00019821747,0.0018296865],"genre_scores_gemma":[0.078689456,0.017485514,0.008278318,0.07475407,0.6586507,0.00017834586,0.0015399879,0.0009386688,0.15948501],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983467,0.00027299742,0.00037678386,0.00026999606,0.0005123234,0.00022121842],"domain_scores_gemma":[0.9912055,0.00309193,0.0008699582,0.00050073,0.0036365087,0.00069534295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015918366,0.0015281301,0.0015293777,0.0024391506,0.0015150922,0.0017583374,0.002690455,0.008381036,0.02125557],"category_scores_gemma":[0.026998641,0.0008141642,0.0014201014,0.0010075095,0.0016891774,0.0016400918,0.0013355808,0.0077467863,0.007788628],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019044269,0.000024930689,0.0005594905,0.0006564154,0.00007094233,0.033319775,0.00011190787,0.0002546223,0.0004235298,0.0017980302,0.941423,0.021166958],"study_design_scores_gemma":[0.00017821902,0.00008221912,0.0027358052,0.00071980874,0.00019307726,0.047022305,0.0002695761,0.00089739315,0.0019114178,0.0028377636,0.9430328,0.000119533244],"about_ca_topic_score_codex":0.0042122784,"about_ca_topic_score_gemma":0.0039601913,"teacher_disagreement_score":0.02125557,"about_ca_system_score_codex":0.0019632017,"about_ca_system_score_gemma":0.0018818546,"threshold_uncertainty_score":0.07110703},"labels":[],"label_agreement":null},{"id":"W2888018398","doi":"10.1038/s41379-018-0110-y","title":"A common classification framework for neuroendocrine neoplasms: an International Agency for Research on Cancer (IARC) and World Health Organization (WHO) expert consensus proposal","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":1125,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Cancer Institute; Centre International de Recherche sur le Cancer; World Health Organization","keywords":"Pathology; Neuroendocrine tumors; Confusion; Cancer; Medicine; Psychology; Internal medicine","score_opus":0.15660080956206027,"score_gpt":0.49078115769868597,"score_spread":0.33418034813662567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888018398","genre_codex":"commentary","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0040990813,0.14177102,0.16816862,0.6006812,0.055375993,0.0042944504,0.002189401,0.0011573292,0.022262888],"genre_scores_gemma":[0.046179075,0.10363973,0.6828394,0.10756807,0.021945942,0.010608114,0.014001396,0.00081152486,0.012406766],"study_design_codex":"not_applicable","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9341819,0.024017023,0.017104533,0.004366063,0.016836133,0.0034944462],"domain_scores_gemma":[0.8623228,0.01946019,0.008783683,0.004926342,0.09441458,0.010092416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.1421567,0.0033109006,0.0054521803,0.020074265,0.005585347,0.011113856,0.018368933,0.0121292565,0.0027326024],"category_scores_gemma":[0.095303185,0.0016882906,0.007234411,0.011990279,0.008899612,0.01087891,0.011117566,0.024210189,0.003588801],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025809868,0.00034920915,0.006111206,0.006687532,0.00029051834,0.0009989522,0.0038856375,0.0020835334,0.002155267,0.093632184,0.48801473,0.39553317],"study_design_scores_gemma":[0.00017882533,0.00029872076,0.006038884,0.02027014,0.00056502427,0.0028368523,0.004141967,0.003205495,0.0010051144,0.07549725,0.885601,0.00036066154],"about_ca_topic_score_codex":0.02081322,"about_ca_topic_score_gemma":0.017450953,"teacher_disagreement_score":0.1421567,"about_ca_system_score_codex":0.016566029,"about_ca_system_score_gemma":0.061183553,"threshold_uncertainty_score":0.7518055},"labels":[],"label_agreement":null},{"id":"W2888239073","doi":"10.1038/s41379-018-0107-6","title":"The combination of PTEN deletion and 16p13.3 gain in prostate cancer provides additional prognostic information in patients treated with radical prostatectomy","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; McGill University; U.S. Department of Defense","keywords":"PTEN; Biochemical recurrence; Prostate cancer; Prostatectomy; Hazard ratio; Oncology; Medicine; Metastasis; Internal medicine; Confidence interval; Stage (stratigraphy); Cancer; Prostate; Proportional hazards model; Cancer research; Biology; PI3K/AKT/mTOR pathway","score_opus":0.009244705441278157,"score_gpt":0.26201389366858563,"score_spread":0.2527691882273075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888239073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949379,0.0019060739,0.0005718999,0.00025576676,0.000036445876,0.000009746331,0.00037412372,0.00004129666,0.0018668413],"genre_scores_gemma":[0.9989392,0.00029294498,0.00023844713,0.000029063714,0.000039431845,0.0000028842614,0.00024576113,0.0000045955358,0.00020770097],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997452,0.000060272527,0.00002228245,0.000045697598,0.00008209549,0.000044416836],"domain_scores_gemma":[0.99930847,0.00019881446,0.00021862128,0.00005089235,0.000055538098,0.00016766544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004560502,0.00037641573,0.0004683321,0.0012686386,0.00032434278,0.0006892071,0.00046456605,0.0004381884,0.0025813119],"category_scores_gemma":[0.0017827682,0.00019946838,0.0003486327,0.0012314123,0.0005434101,0.000525529,0.0005771426,0.0006458117,0.0003538715],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001224243,0.00003547889,0.9714272,0.000045584828,0.00011808333,0.0012293686,0.000044446293,0.0004446754,0.00929438,0.00010405613,0.00034344356,0.015688948],"study_design_scores_gemma":[0.00002092287,0.00030404862,0.9867552,0.000012813994,0.00020755266,0.0075676832,0.00011433052,0.00093689613,0.002701353,0.0005351386,0.0008265927,0.000017551889],"about_ca_topic_score_codex":0.000873913,"about_ca_topic_score_gemma":0.0017697075,"teacher_disagreement_score":0.0025813119,"about_ca_system_score_codex":0.00018591422,"about_ca_system_score_gemma":0.00039674705,"threshold_uncertainty_score":0.0086352825},"labels":[],"label_agreement":null},{"id":"W2888696592","doi":"10.1038/s41379-018-0109-4","title":"An international multicenter study to evaluate reproducibility of automated scoring for assessment of Ki67 in breast cancer","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":97,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Juravinski Cancer Centre; Sinai Health System; University of Toronto; Ontario Institute for Cancer Research; Queen's University; Alberta Health Services; McMaster University; Juravinski Hospital; University of British Columbia","funders":"Cure Brain Cancer Foundation; National Institute for Health and Care Research; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; Government of Ontario; Ontario Institute for Cancer Research; Cancer Research UK; Breast Cancer Research Foundation","keywords":"Intraclass correlation; Reproducibility; Medicine; Correlation coefficient; Breast cancer; Coefficient of variation; Confidence interval; Nuclear medicine; Medical physics; Radiology; Statistics; Cancer; Mathematics; Internal medicine","score_opus":0.059686799818928195,"score_gpt":0.42190952613878935,"score_spread":0.36222272631986113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888696592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955113,0.00059031905,0.0016173471,0.00006862973,0.00006558444,0.00037771813,0.00036057652,0.00003038524,0.0013781257],"genre_scores_gemma":[0.9963348,0.00011842975,0.0017835192,0.00013371305,0.0000829103,0.00034493222,0.0007860986,0.000039231116,0.00037633814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.98146605,0.01107489,0.0015468799,0.0025835962,0.0027470414,0.0005816132],"domain_scores_gemma":[0.9501113,0.017986758,0.009286322,0.009704586,0.011259357,0.0016515338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.023237228,0.0010502212,0.0009083876,0.0016348097,0.0011164752,0.0015121166,0.0013369292,0.0013449027,0.0011223311],"category_scores_gemma":[0.038549725,0.00060979265,0.0010891529,0.0018031861,0.0015168859,0.0012614874,0.0011060628,0.0008804993,0.00050827157],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016191177,0.0028158217,0.94549143,0.00025538637,0.002767788,0.00017028194,0.002262982,0.0004650521,0.0050991643,0.0002656586,0.00084724114,0.023368027],"study_design_scores_gemma":[0.001815481,0.010618934,0.97702456,0.00007784586,0.0016433005,0.00056518527,0.00091185,0.0015787288,0.0030344853,0.00012878458,0.0025398822,0.000060979088],"about_ca_topic_score_codex":0.0038682276,"about_ca_topic_score_gemma":0.0036765642,"teacher_disagreement_score":0.023237228,"about_ca_system_score_codex":0.0010757502,"about_ca_system_score_gemma":0.0009885042,"threshold_uncertainty_score":0.122891665},"labels":[],"label_agreement":null},{"id":"W2889692270","doi":"10.1038/s41379-018-0126-3","title":"The role of a monoclonal antibody 11C8B1 as a diagnostic marker of IDH2-mutated sinonasal undifferentiated carcinoma","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Head and Neck Surgical Oncology","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"National Cancer Institute; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; National Institutes of Health; Memorial Sloan-Kettering Cancer Center","keywords":"IDH2; IDH1; Pathology; Immunohistochemistry; Intrahepatic Cholangiocarcinoma; Monoclonal antibody; Biology; Carcinoma; Hematopathology; Chondrosarcoma; Cancer research; Mutation; Medicine; Antibody; Immunology; Cytogenetics; Gene","score_opus":0.010426660580957469,"score_gpt":0.2971451808099322,"score_spread":0.2867185202289747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889692270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9458102,0.033160385,0.004062904,0.0010748584,0.0003002964,0.00006587685,0.00007980805,0.00012115647,0.0153246075],"genre_scores_gemma":[0.9921536,0.0029138783,0.0039616083,0.00013867002,0.00010810163,0.000021710368,0.000060065624,0.000009054596,0.00063339324],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996917,0.00009757638,0.00002657466,0.00004637245,0.000058653375,0.00007913575],"domain_scores_gemma":[0.99922824,0.00036479605,0.000054797423,0.000063754145,0.00016807491,0.00012028429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015623233,0.0004904601,0.0003540083,0.0028997462,0.00036677413,0.0010500291,0.00073181256,0.0009203636,0.0013322638],"category_scores_gemma":[0.0019040891,0.00038551434,0.00023453622,0.0005980623,0.00077834004,0.0008238743,0.00039834276,0.0006211995,0.00046595512],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004609859,0.0004425844,0.29350784,0.0006111977,0.00016566302,0.022927856,0.00026351865,0.0015644779,0.43985134,0.0038770528,0.0023107752,0.22986777],"study_design_scores_gemma":[0.00071880064,0.004046189,0.3204838,0.0005496832,0.0014589198,0.09110105,0.0010653976,0.069528446,0.44031,0.0057570417,0.064832464,0.000148251],"about_ca_topic_score_codex":0.0011693065,"about_ca_topic_score_gemma":0.0013615795,"teacher_disagreement_score":0.0028997462,"about_ca_system_score_codex":0.0008321012,"about_ca_system_score_gemma":0.0005007829,"threshold_uncertainty_score":0.008262455},"labels":[],"label_agreement":null},{"id":"W2894222421","doi":"10.1038/s41379-018-0123-6","title":"RETRACTED ARTICLE: Cervical adenosquamous carcinoma: detailed analysis of morphology, immunohistochemical profile, and clinical outcomes in 59 cases","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Colorectal and Anal Carcinomas","field":"Medicine","cited_by":40,"is_retracted":true,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"National Cancer Institute; U.S. Department of Health and Human Services","keywords":"Adenosquamous carcinoma; Pathology; Medicine; Adenocarcinoma; Carcinoma; Immunohistochemistry; Cancer; Internal medicine","score_opus":0.027801235959630563,"score_gpt":0.3232050170155395,"score_spread":0.2954037810559089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2894222421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40145698,0.024192423,0.007014244,0.2246029,0.3224019,0.00029955665,0.005399461,0.00066693325,0.01396563],"genre_scores_gemma":[0.73421013,0.017573586,0.009413684,0.0830958,0.09724326,0.00019791424,0.005011588,0.00041622057,0.052837778],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99927753,0.00008233294,0.00018514702,0.00010365424,0.00022885119,0.00012254242],"domain_scores_gemma":[0.9965893,0.0011001116,0.00031236705,0.0003113431,0.0012071966,0.0004797823],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012595395,0.00047437675,0.0006786205,0.0014073927,0.0010136073,0.0008263844,0.0008958093,0.0031188563,0.004878711],"category_scores_gemma":[0.008724043,0.0002605911,0.000565746,0.00084700505,0.000735861,0.0009836176,0.0009043791,0.0022390212,0.002788136],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006909521,0.0003090556,0.12812662,0.00090005394,0.00020102263,0.25935188,0.0010781604,0.00049385626,0.0058426014,0.0012863582,0.46589375,0.1358257],"study_design_scores_gemma":[0.00013423667,0.00045197623,0.20843737,0.0006039997,0.0003807813,0.33638898,0.002298938,0.0012808507,0.006226663,0.001897714,0.44169748,0.00020108215],"about_ca_topic_score_codex":0.0019812295,"about_ca_topic_score_gemma":0.0030761082,"teacher_disagreement_score":0.9968811,"about_ca_system_score_codex":0.00079706137,"about_ca_system_score_gemma":0.0009225699,"threshold_uncertainty_score":0.016320884},"labels":[],"label_agreement":null},{"id":"W2898983490","doi":"10.1038/s41379-018-0167-7","title":"GATA3 immunoreactivity expands the transcription factor profile of pituitary neuroendocrine tumors","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"GATA3; Thyrotropic cell; Corticotropic cell; Somatotropic cell; Immunohistochemistry; Pathology; Pituitary tumors; Biology; Null cell; Prolactin cell; Internal medicine; Medicine; Cancer research; Endocrinology; Pituitary gland; Transcription factor; Hormone","score_opus":0.013875409788834203,"score_gpt":0.2543919012656475,"score_spread":0.24051649147681328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898983490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99464476,0.0015262202,0.0014645621,0.00013859606,0.000016524027,0.0000036323472,0.0003243089,0.00005115067,0.0018302898],"genre_scores_gemma":[0.9974228,0.00057880965,0.0005135369,0.00007521499,0.000024545556,0.0000041943226,0.0003151019,0.000024637984,0.0010412033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988925,0.000013130796,0.000008806096,0.00002940731,0.00003317515,0.000026188325],"domain_scores_gemma":[0.99984396,0.000037607664,0.00002938599,0.000019353154,0.000024751856,0.000044847784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017389879,0.00016144109,0.00017003543,0.0006084907,0.00016592025,0.00031219854,0.00014104748,0.00016132677,0.002446024],"category_scores_gemma":[0.00018897232,0.0001274116,0.00015980142,0.00032600723,0.00033050985,0.00021755314,0.00023865364,0.00028473587,0.0002792751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000149539,0.0000036704744,0.008673386,0.000013978936,0.000005907555,0.00016482532,0.000032569766,0.000017646595,0.9887481,0.00012387504,0.00003566924,0.002030764],"study_design_scores_gemma":[0.00002541948,0.0002602127,0.602087,0.00001832259,0.0000674115,0.0077534094,0.000377272,0.0006801409,0.37921777,0.0010023175,0.008490382,0.0000203559],"about_ca_topic_score_codex":0.00072533364,"about_ca_topic_score_gemma":0.001306098,"teacher_disagreement_score":0.002446024,"about_ca_system_score_codex":0.00020671968,"about_ca_system_score_gemma":0.0001621265,"threshold_uncertainty_score":0.008182764},"labels":[],"label_agreement":null},{"id":"W2901798495","doi":"10.1038/s41379-018-0180-x","title":"Legumain is an independent predictor for invasive recurrence in breast ductal carcinoma in situ","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Ductal carcinoma; Tissue microarray; Breast cancer; Oncology; Medicine; Pathology; Stroma; Internal medicine; Immunohistochemistry; Cancer; Biology","score_opus":0.01595144592134227,"score_gpt":0.25021692810773516,"score_spread":0.2342654821863929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901798495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986613,0.00073753815,0.00012035588,0.000059174126,0.000012861021,0.0000020455911,0.00007480125,0.000005521906,0.0003264017],"genre_scores_gemma":[0.9991222,0.0002725059,0.00010408564,0.000012250953,0.000036270936,0.0000026153627,0.00014098655,0.0000016431032,0.0003072398],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998851,0.00003115713,0.000013273353,0.000016547932,0.0000313836,0.00002261457],"domain_scores_gemma":[0.99913603,0.00025720286,0.0003552681,0.000045980916,0.00006091133,0.00014460446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025149665,0.00021108864,0.0002295531,0.0006344456,0.00021133394,0.00054477504,0.0003076319,0.00038921836,0.0012688809],"category_scores_gemma":[0.0013351433,0.00014539891,0.0001994878,0.0006438565,0.00022273447,0.00024939343,0.00019663078,0.00047468298,0.00019101432],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045592603,0.00005044642,0.9891712,0.000022389904,0.00005352344,0.00047496418,0.000054124826,0.0000492456,0.0055004545,0.000040423925,0.00008799169,0.0040392373],"study_design_scores_gemma":[0.000007097786,0.00013331832,0.9963965,0.000005265811,0.000071231036,0.0016214359,0.00012873253,0.00038484993,0.00089491386,0.00008744521,0.0002643378,0.000004875465],"about_ca_topic_score_codex":0.000691762,"about_ca_topic_score_gemma":0.0006829362,"teacher_disagreement_score":0.0012688809,"about_ca_system_score_codex":0.0001424036,"about_ca_system_score_gemma":0.00016251544,"threshold_uncertainty_score":0.004244864},"labels":[],"label_agreement":null},{"id":"W2903652968","doi":"10.1038/s41379-018-0104-9","title":"Reply to: Interobserver variability in colorectal cancer and the 2016 ITBCC consensus","year":2018,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Colorectal Cancer Screening and Detection","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Colorectal cancer; Medicine; Consensus conference; Pathology; Medical physics; Radiology; Cancer; General surgery; Internal medicine","score_opus":0.022081426810294603,"score_gpt":0.2791924549172186,"score_spread":0.257111028106924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903652968","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003247402,0.0005949782,0.00011330726,0.97569454,0.022504557,0.0000076437655,0.00006680209,0.000015764894,0.0006776496],"genre_scores_gemma":[0.0056690765,0.00062817475,0.0003503086,0.94289607,0.04845418,0.00005575849,0.000086567736,0.000036171667,0.0018236291],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.98350877,0.004156569,0.0039509973,0.0021199242,0.004590877,0.0016728841],"domain_scores_gemma":[0.9144684,0.04268469,0.008898679,0.002300801,0.026811564,0.004835888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.013500188,0.0007781294,0.0016287527,0.0013563527,0.003888793,0.004203537,0.0024859007,0.05187412,0.0048706587],"category_scores_gemma":[0.1382522,0.0011000407,0.0013345185,0.0014185314,0.0030890885,0.0032037166,0.0027161464,0.03257925,0.0049244566],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000609889,0.000011154204,0.0019630042,0.00008592164,0.000025659452,0.00061563926,0.00020368601,0.00006620592,0.00012673049,0.0007789181,0.9892758,0.006786404],"study_design_scores_gemma":[0.00016747859,0.000091596354,0.0069163875,0.0014009998,0.00016261215,0.0031321603,0.0014716018,0.00093593344,0.0007788586,0.0064112362,0.97830015,0.00023089464],"about_ca_topic_score_codex":0.0076040914,"about_ca_topic_score_gemma":0.01023683,"teacher_disagreement_score":0.05187412,"about_ca_system_score_codex":0.007101356,"about_ca_system_score_gemma":0.006624339,"threshold_uncertainty_score":0.07139665},"labels":[],"label_agreement":null},{"id":"W2904739203","doi":"10.1038/s41379-018-0022-x","title":"MUC4 Staining in Sarcomatoid Carcinomas","year":2018,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Metastasis and carcinoma case studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency; University of British Columbia","funders":"","keywords":"Sarcomatoid carcinoma; Pathology; Staining; Immunohistochemistry; Hematopathology; Mesothelioma; Biology; Carcinoma; Lung; Medicine; Gene; Internal medicine; Cytogenetics","score_opus":0.04395109723060738,"score_gpt":0.28331152587810077,"score_spread":0.23936042864749338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904739203","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39359075,0.03721192,0.0030189913,0.4085855,0.012839135,0.0001841889,0.00047066054,0.00031869666,0.14378011],"genre_scores_gemma":[0.90585464,0.010897022,0.0020868776,0.036374956,0.026719224,0.00005012656,0.0001472939,0.000067967565,0.017801909],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99958736,0.000098442135,0.00006841822,0.000053740405,0.00008094918,0.00011114062],"domain_scores_gemma":[0.9987112,0.0005653695,0.00017178497,0.00013863944,0.00019155281,0.00022139588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075695594,0.00046486798,0.00042908208,0.0013053418,0.0010566451,0.0012072225,0.00076745986,0.0074069714,0.004088528],"category_scores_gemma":[0.0051494343,0.00049715047,0.00044055478,0.00071428664,0.0014217354,0.0014559687,0.00070701947,0.0028957548,0.0012716268],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012305878,0.000028383016,0.008617015,0.00012855914,0.000015403612,0.94560736,0.00025928114,0.00009828146,0.002216246,0.0021002153,0.030679949,0.010126167],"study_design_scores_gemma":[0.00003350993,0.00006502677,0.005770689,0.00012376589,0.000041716707,0.9338155,0.0003637541,0.00046361357,0.0013787661,0.0028335482,0.055088174,0.000021963042],"about_ca_topic_score_codex":0.000949721,"about_ca_topic_score_gemma":0.0015574694,"teacher_disagreement_score":0.0074069714,"about_ca_system_score_codex":0.0012101341,"about_ca_system_score_gemma":0.00044813828,"threshold_uncertainty_score":0.013677478},"labels":[],"label_agreement":null},{"id":"W2912623612","doi":"10.1038/s41379-018-0198-0","title":"Colitis-associated colorectal adenocarcinomas are frequently associated with non-intestinal mucin profiles and loss of SATB2 expression","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sinai Health System","funders":"","keywords":"Colitis; Medicine; Immunohistochemistry; Colorectal cancer; Adenocarcinoma; Pathology; Carcinoma; CDX2; Mucin; Inflammatory bowel disease; Collagenous colitis; Gastroenterology; Internal medicine; Disease; Cancer; Biology; Gene expression; Gene","score_opus":0.012075542612732424,"score_gpt":0.23455098579386188,"score_spread":0.22247544318112947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912623612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939161,0.0027006515,0.00073473714,0.00008547646,0.000023530654,0.000010039429,0.00045331617,0.00003838214,0.0020377995],"genre_scores_gemma":[0.99769336,0.000715972,0.0005541342,0.000026293123,0.000018541275,0.000004470557,0.00048004545,0.000009033384,0.00049813016],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997619,0.00004186509,0.000030801388,0.0000461155,0.00006748088,0.00005197316],"domain_scores_gemma":[0.99909556,0.00013049998,0.000498552,0.000061183426,0.00008274802,0.00013141117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016285345,0.0002730505,0.00023110265,0.0013070562,0.00029235287,0.00043099996,0.00015775529,0.00026685468,0.0020924371],"category_scores_gemma":[0.00081921276,0.00013749432,0.00029169026,0.0014099972,0.0002800737,0.00017442621,0.0003328834,0.00030852508,0.00037568365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012938315,0.00006033475,0.79751724,0.00024240008,0.00021318479,0.0124597205,0.00013613659,0.0001042679,0.16894013,0.0002920208,0.0004690743,0.018271599],"study_design_scores_gemma":[0.0000081720345,0.00007979551,0.96592385,0.000019858166,0.00012945657,0.02215993,0.00016882291,0.00022658039,0.008644602,0.00014861686,0.0024824294,0.000007834797],"about_ca_topic_score_codex":0.00073948596,"about_ca_topic_score_gemma":0.0012919442,"teacher_disagreement_score":0.0020924371,"about_ca_system_score_codex":0.00012597615,"about_ca_system_score_gemma":0.00014471052,"threshold_uncertainty_score":0.0069999695},"labels":[],"label_agreement":null},{"id":"W2913552625","doi":"10.1038/s41379-019-0204-1","title":"Ductal carcinoma in situ of the breast: an update for the pathologist in the era of individualized risk assessment and tailored therapies","year":2019,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Medicine; Ductal carcinoma; Pathology; Carcinoma in situ; In situ; Carcinoma; Breast cancer; Internal medicine; Cancer","score_opus":0.03537480353786879,"score_gpt":0.33830229444879906,"score_spread":0.3029274909109303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913552625","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003893281,0.99804497,0.00012812753,0.00073270296,0.000681481,0.0000023381704,0.000016817577,0.000008535072,0.00034608904],"genre_scores_gemma":[0.00030133757,0.9970637,0.00029061246,0.0008715111,0.0010794061,0.000003442972,0.00003252792,0.0000020274963,0.00035545783],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995938,0.00008898305,0.00006985652,0.000058928294,0.00015367563,0.000034803983],"domain_scores_gemma":[0.99857664,0.0008521019,0.00013329185,0.000029889288,0.00029836758,0.00010976257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012684102,0.0010736473,0.002059111,0.0024820594,0.00026754147,0.001601061,0.0012204876,0.0018944363,0.0029648552],"category_scores_gemma":[0.0019585544,0.00032935294,0.0006492507,0.0019519206,0.0005969615,0.002087432,0.0010155162,0.0026517655,0.0015192335],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084953404,0.000044470544,0.00025920436,0.012608895,0.00008327515,0.00045927308,0.000047584515,0.00036323658,0.00072678295,0.0021591836,0.117359765,0.86580336],"study_design_scores_gemma":[0.000025298572,0.000075758144,0.00071795756,0.006695012,0.00016846706,0.002399487,0.00007130501,0.00014360843,0.00013823589,0.0016264248,0.98790866,0.000029935261],"about_ca_topic_score_codex":0.0011706114,"about_ca_topic_score_gemma":0.0032095541,"teacher_disagreement_score":0.0029648552,"about_ca_system_score_codex":0.00087433524,"about_ca_system_score_gemma":0.0016322,"threshold_uncertainty_score":0.009918451},"labels":[],"label_agreement":null},{"id":"W2930807162","doi":"10.1038/modpathol.2018.10","title":"USCAP 2018 Abstracts: Genitourinary Pathology (894–1126)","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Houston Methodist Research Institute; University of Texas MD Anderson Cancer Center; School of Medicine, Stanford University; Universidade de São Paulo; Houston Methodist Hospital; McMaster University; Foundation Medicine; McGill University; University of Pennsylvania; Emory University; Cleveland Clinic; Henry Ford Health System","keywords":"Genitourinary system; Pathology; Medicine; Anatomical pathology; Anatomy; Immunohistochemistry","score_opus":0.02833171415971428,"score_gpt":0.2988372768095595,"score_spread":0.2705055626498452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2930807162","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015942147,0.008763528,0.000837708,0.011650829,0.030236483,0.00049636344,0.015133251,0.001914607,0.92937297],"genre_scores_gemma":[0.0034396905,0.005073892,0.0004461479,0.0031260296,0.011980524,0.00017225996,0.008020311,0.00045913388,0.9672821],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990188,0.000111856076,0.00013504583,0.0001873419,0.00039401735,0.00015286579],"domain_scores_gemma":[0.9942258,0.0005192929,0.00044155895,0.00034306245,0.0025969674,0.0018733988],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012143204,0.0017351131,0.0009851805,0.006205884,0.001902082,0.005694578,0.0016674125,0.0040400242,0.8333674],"category_scores_gemma":[0.0039226743,0.0008865095,0.0012441825,0.0034010767,0.0009036487,0.0028683285,0.0031848669,0.0023761166,0.7156027],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005786351,0.00006837966,0.0003666414,0.00038737463,0.000010341453,0.00015958736,0.000007315105,0.00006754242,0.0003834009,0.00035071743,0.92655796,0.07158291],"study_design_scores_gemma":[0.000026587648,0.000046607227,0.0014588272,0.00046220474,0.000008926493,0.00032776757,0.000020675461,0.000092301845,0.00026565534,0.00042975895,0.99685115,0.000009571717],"about_ca_topic_score_codex":0.0022983612,"about_ca_topic_score_gemma":0.00417753,"teacher_disagreement_score":0.8333674,"about_ca_system_score_codex":0.0018236084,"about_ca_system_score_gemma":0.002912933,"threshold_uncertainty_score":0.23768121},"labels":[],"label_agreement":null},{"id":"W2940713869","doi":"10.1038/s41379-019-0279-8","title":"Whole exome sequencing reveals mutations in FAT1 tumor suppressor gene clinically impacting on peripheral T-cell lymphoma not otherwise specified","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Exome sequencing; Exome; Lymphoma; Biology; T-cell lymphoma; Peripheral T-cell lymphoma; Epigenetics; Mutation; Gene; Tumor suppressor gene; Cancer research; Genetics; T cell; Carcinogenesis; Immunology","score_opus":0.03551794023435979,"score_gpt":0.29778706115038767,"score_spread":0.2622691209160279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2940713869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978067,0.00036215977,0.00055806513,0.000067344874,0.000005263085,0.000009857562,0.0004392338,0.000013527263,0.00073798234],"genre_scores_gemma":[0.99842405,0.00019646404,0.00041453415,0.00006297263,0.0000046489304,0.0000055957676,0.00057097577,0.000005181392,0.0003156],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998709,0.000017004277,0.000014627993,0.000042129443,0.000025995005,0.000029350174],"domain_scores_gemma":[0.99980813,0.00008195383,0.000039604176,0.00002176854,0.000020971227,0.00002761373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016176236,0.00022761841,0.0002203709,0.0005686683,0.00023246242,0.00038656316,0.0001230117,0.00039543948,0.0015619679],"category_scores_gemma":[0.00060922134,0.00008544748,0.00021050098,0.00034805684,0.00017566113,0.00015239471,0.00027861688,0.00020683405,0.00024200775],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023622888,0.0002050416,0.4460008,0.00027342778,0.0002376531,0.057410304,0.0008258402,0.0017519257,0.41189867,0.0006668548,0.0020040607,0.07636311],"study_design_scores_gemma":[0.00007073249,0.00042696996,0.8361274,0.0000834109,0.00032172524,0.08882217,0.0006531266,0.0045514717,0.061283875,0.00075671583,0.0068734735,0.000028881292],"about_ca_topic_score_codex":0.0006881498,"about_ca_topic_score_gemma":0.0012316721,"teacher_disagreement_score":0.0015619679,"about_ca_system_score_codex":0.00022441254,"about_ca_system_score_gemma":0.00011939814,"threshold_uncertainty_score":0.005225301},"labels":[],"label_agreement":null},{"id":"W2950368777","doi":"10.1038/s41379-019-0293-x","title":"GLI1-amplifications expand the spectrum of soft tissue neoplasms defined by GLI1 gene fusions","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"National Cancer Institute; Cycle for Survival","keywords":"Soft tissue; Pathology; GLI1; Biology; Medicine; Anatomy; Gene; Genetics","score_opus":0.009574766275311513,"score_gpt":0.2364096097920788,"score_spread":0.2268348435167673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950368777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98434246,0.0022673134,0.0033823284,0.00014094809,0.00000987891,0.00003059417,0.00032591203,0.00013662278,0.00936395],"genre_scores_gemma":[0.9977054,0.0007135774,0.00091011013,0.000023208437,0.000009946058,0.0000081594935,0.0001255686,0.000014498006,0.00048953627],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997584,0.000030918476,0.000027101745,0.000037141428,0.000077963785,0.00006847897],"domain_scores_gemma":[0.9996044,0.00017254375,0.000080584774,0.000051757,0.00003946058,0.000051333514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003135758,0.0004756947,0.00033314538,0.0018008377,0.00022679433,0.00056347955,0.00027532215,0.00027397284,0.0028324246],"category_scores_gemma":[0.0005270013,0.0002196625,0.00024037689,0.0008301637,0.00054206146,0.0005031564,0.0009125968,0.00037450026,0.00077704346],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009827139,0.00005087977,0.052412514,0.00016204447,0.00004121761,0.018977638,0.00038781652,0.0005393182,0.89475644,0.002273866,0.00024438623,0.02917125],"study_design_scores_gemma":[0.000046498863,0.0003504017,0.34611112,0.00006132871,0.0002133496,0.19271895,0.00061444775,0.0025440392,0.43717116,0.004450707,0.015673252,0.000044703833],"about_ca_topic_score_codex":0.00037616157,"about_ca_topic_score_gemma":0.00058584055,"teacher_disagreement_score":0.0028324246,"about_ca_system_score_codex":0.00021811496,"about_ca_system_score_gemma":0.00015088446,"threshold_uncertainty_score":0.00947535},"labels":[],"label_agreement":null},{"id":"W2950944367","doi":"10.1038/s41379-019-0299-4","title":"Myxoid smooth muscle neoplasia of the uterus: comprehensive analysis by next-generation sequencing and nucleic acid hybridization","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"Brigham and Women's Hospital","keywords":"Smooth Muscle Tumor; Biology; Leiomyosarcoma; Pathology; Sarcoma; Comparative genomic hybridization; Gene; Medicine; Genetics; Genome","score_opus":0.03132582788930982,"score_gpt":0.2471703793051388,"score_spread":0.21584455141582898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950944367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9417405,0.013607543,0.03855042,0.00072393764,0.00009175846,0.00015936435,0.002341313,0.00021050948,0.0025747616],"genre_scores_gemma":[0.94339937,0.005229967,0.046889048,0.00047310544,0.00006386171,0.00011324202,0.0022287644,0.00005293751,0.001549682],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.9996662,0.000058433696,0.000020113535,0.00008967514,0.00012741468,0.000038170496],"domain_scores_gemma":[0.99973065,0.00010685295,0.00004431465,0.000026711126,0.000064546344,0.000026874553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057210773,0.00030854155,0.0003426312,0.0012833555,0.00039054634,0.00058286445,0.0002716056,0.00044328204,0.0004119219],"category_scores_gemma":[0.00077261036,0.00020109676,0.00037410812,0.00046400796,0.00027065276,0.00018912573,0.00042676466,0.0004243744,0.0001298882],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003478964,0.00009756004,0.09479091,0.000375624,0.00031838813,0.0030747915,0.00046068348,0.0014535205,0.81162006,0.0010180159,0.001118148,0.085324235],"study_design_scores_gemma":[0.00005462889,0.0006032873,0.63873935,0.00030123274,0.0012842709,0.023911186,0.0011458016,0.027455764,0.26065463,0.005151165,0.04059066,0.000108056345],"about_ca_topic_score_codex":0.0013918517,"about_ca_topic_score_gemma":0.0033906247,"teacher_disagreement_score":0.0013918517,"about_ca_system_score_codex":0.0002863087,"about_ca_system_score_gemma":0.00046219543,"threshold_uncertainty_score":0.0030255914},"labels":[],"label_agreement":null},{"id":"W2952439923","doi":"10.1038/s41379-019-0304-y","title":"Hybrid oncocytic/chromophobe renal tumors are molecularly distinct from oncocytoma and chromophobe renal cell carcinoma","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; University of Texas MD Anderson Cancer Center; Sheikh Khalifa Bin Zayed Al Nahyan Institute for Personalized Cancer Therapy; Khalifa Bin Zayed Al Nahyan Foundation","keywords":"Oncocytoma; Chromophobe cell; Renal oncocytoma; Clear cell; Pathology; Biology; Renal cell carcinoma; Medicine","score_opus":0.012396396561174809,"score_gpt":0.2240629441666687,"score_spread":0.2116665476054939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952439923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887636,0.0012469982,0.0020095727,0.00014196147,0.000031999884,0.00003584019,0.0001277488,0.00006181584,0.0075806095],"genre_scores_gemma":[0.9980013,0.0002698041,0.00070924405,0.00003256683,0.000023269182,0.00000790959,0.000118257914,0.000009761062,0.0008279316],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998215,0.000018287592,0.000014681929,0.000032027172,0.000055648008,0.000057945068],"domain_scores_gemma":[0.9996939,0.000069746755,0.000076376564,0.00003292499,0.00004374308,0.000083312254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016625045,0.00019575532,0.00022972235,0.00065906445,0.00026855373,0.00086707127,0.00022551867,0.0003253893,0.0022865594],"category_scores_gemma":[0.00041728475,0.0001408021,0.00016045965,0.0004415797,0.00047768306,0.0005150732,0.0005290242,0.0004269095,0.00047680555],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016222708,0.00014708484,0.11471004,0.0002015779,0.000098658566,0.029057104,0.00052237435,0.00030029693,0.81107295,0.014870506,0.00043383366,0.02696325],"study_design_scores_gemma":[0.00015457798,0.0010390743,0.52027804,0.00004370671,0.00027976898,0.19958936,0.0017287355,0.0031154237,0.23731078,0.009418946,0.026969861,0.00007170714],"about_ca_topic_score_codex":0.0007817723,"about_ca_topic_score_gemma":0.0008928844,"teacher_disagreement_score":0.0022865594,"about_ca_system_score_codex":0.0002920339,"about_ca_system_score_gemma":0.00036831165,"threshold_uncertainty_score":0.0076493025},"labels":[],"label_agreement":null},{"id":"W2952513725","doi":"10.1038/s41379-019-0310-0","title":"MTAP immunohistochemistry is an accurate and reproducible surrogate for CDKN2A fluorescence in situ hybridization in diagnosis of malignant pleural mesothelioma","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":165,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Immunohistochemistry; Fluorescence in situ hybridization; Mesothelioma; Pathology; CDKN2A; In situ hybridization; Medicine; Tissue microarray; Staining; Stain; Biology; Cancer; Internal medicine","score_opus":0.019599562378620313,"score_gpt":0.28760940336757557,"score_spread":0.26800984098895525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952513725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8827817,0.011101405,0.08750426,0.0006451436,0.00029105507,0.00016467948,0.0008658502,0.0006556482,0.015990378],"genre_scores_gemma":[0.9783584,0.00093079515,0.01846267,0.00010361113,0.00004836001,0.000083261824,0.00028246894,0.00006124768,0.0016691644],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99718803,0.001043896,0.00031614376,0.0005584275,0.0006873083,0.00020618827],"domain_scores_gemma":[0.99733776,0.0012248219,0.0003562286,0.0003672961,0.00058343756,0.00013055581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033965944,0.00052504305,0.00041082466,0.0017908964,0.000676339,0.0013308617,0.00063906744,0.0008266498,0.0015977161],"category_scores_gemma":[0.0050269184,0.0005796672,0.00032048736,0.0007503007,0.0008834174,0.0009854203,0.00059029367,0.00075422163,0.0009224477],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011356698,0.00008459085,0.17257513,0.000289726,0.00014801568,0.0014642015,0.000394219,0.0006143276,0.789119,0.0011158929,0.0006261108,0.032433067],"study_design_scores_gemma":[0.000039300863,0.0006579733,0.33636597,0.00009442499,0.00027056478,0.012169176,0.0005722849,0.014511281,0.62343067,0.0014949098,0.010335606,0.00005783573],"about_ca_topic_score_codex":0.0010199347,"about_ca_topic_score_gemma":0.0021726836,"teacher_disagreement_score":0.0033965944,"about_ca_system_score_codex":0.0005033905,"about_ca_system_score_gemma":0.00038590445,"threshold_uncertainty_score":0.017963171},"labels":[],"label_agreement":null},{"id":"W2952747247","doi":"10.1038/s41379-019-0308-7","title":"Reproducibility of visual estimation of lung adenocarcinoma subtype proportions","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; St. Paul's Hospital; University of British Columbia Hospital","funders":"","keywords":"Reproducibility; Medicine; Adenocarcinoma; Pathology; Cutoff; Intraclass correlation; Magnification; Radiology; Nuclear medicine; Cancer; Internal medicine; Statistics; Mathematics; Computer science; Artificial intelligence","score_opus":0.016825118608347466,"score_gpt":0.3171552101071946,"score_spread":0.30033009149884715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952747247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88870573,0.004601383,0.0874814,0.00022925647,0.0006715897,0.0001734651,0.0015056579,0.0014323107,0.015199284],"genre_scores_gemma":[0.99294573,0.000109309665,0.0056184363,0.000081212136,0.000052547584,0.000033103755,0.00039568523,0.00013941934,0.00062453415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9743196,0.013102457,0.001898761,0.006300916,0.0036161453,0.00076215825],"domain_scores_gemma":[0.8995342,0.066132694,0.005819158,0.018110977,0.009596984,0.00080588704],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.022151154,0.00059635355,0.0006833096,0.0022698336,0.00061945507,0.0028668533,0.0010043647,0.0012112217,0.0017185074],"category_scores_gemma":[0.082097396,0.00048630938,0.0008015392,0.00093005196,0.0012885892,0.0012522002,0.0017335635,0.00064657786,0.0008370805],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052522714,0.000114541945,0.8074752,0.00058566785,0.0018606408,0.00017453425,0.0018107243,0.00431908,0.034961607,0.0014152011,0.002293355,0.13973713],"study_design_scores_gemma":[0.00012247321,0.00068395335,0.931347,0.00011435524,0.00083676656,0.0017514817,0.0006542733,0.025130328,0.03131553,0.002847965,0.0050513027,0.00014455857],"about_ca_topic_score_codex":0.002301969,"about_ca_topic_score_gemma":0.002821935,"teacher_disagreement_score":0.9778488,"about_ca_system_score_codex":0.0005955444,"about_ca_system_score_gemma":0.00034646972,"threshold_uncertainty_score":0.11714792},"labels":[],"label_agreement":null},{"id":"W2954220835","doi":"10.1038/s41379-019-0300-2","title":"Genomic and transcriptomic comparison of post-radiation versus sporadic sarcomas","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Vascular Tumors and Angiosarcomas","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Université de Bordeaux; Université de Pau et des Pays de l'Adour; Institut Gustave-Roussy; Institut Bergonié; Centre Léon Bérard; Institut National de la Santé et de la Recherche Médicale","keywords":"CDKN2A; Transcriptome; CDKN2B; Biology; Carcinogenesis; Comparative genomic hybridization; Fusion gene; Cancer research; Sarcoma; Gene; Gene expression profiling; Copy-number variation; Copy number analysis; Genetics; Pathology; Gene expression; Medicine; Genome","score_opus":0.017447758705804905,"score_gpt":0.27105467792624455,"score_spread":0.25360691922043965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954220835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939681,0.00081639434,0.00070360885,0.00006553007,0.000015196139,0.000008393402,0.0030984355,0.00003035805,0.0012940478],"genre_scores_gemma":[0.9926345,0.00046808147,0.00066218834,0.00007039771,0.00001550424,0.000017982095,0.004393182,0.000016550754,0.0017217663],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998647,0.00001069541,0.000009245139,0.00005066332,0.000026920381,0.00003766817],"domain_scores_gemma":[0.99986255,0.00003860132,0.000041281746,0.0000134059155,0.000024465508,0.000019755696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009768373,0.00012054269,0.00019787208,0.00071344676,0.0002496799,0.0003221578,0.00011204163,0.00018822533,0.0026559227],"category_scores_gemma":[0.0002815886,0.00008987942,0.0002277265,0.0005495022,0.00016642173,0.00012919903,0.00022650628,0.00018679253,0.00039783158],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011503933,0.0000445176,0.040775184,0.00016798459,0.00011421301,0.00069587317,0.00024891802,0.0002119985,0.944156,0.00030915427,0.00034449945,0.01178124],"study_design_scores_gemma":[0.000027276094,0.00055525365,0.9186924,0.00002646424,0.00026064971,0.003485272,0.0007899132,0.0010042945,0.06472437,0.00040605367,0.010012047,0.000016058479],"about_ca_topic_score_codex":0.0006342965,"about_ca_topic_score_gemma":0.0010104442,"teacher_disagreement_score":0.0026559227,"about_ca_system_score_codex":0.00013889097,"about_ca_system_score_gemma":0.00014492014,"threshold_uncertainty_score":0.008884966},"labels":[],"label_agreement":null},{"id":"W2954281788","doi":"10.1038/s41379-019-0312-y","title":"Expression of lymphocyte immunoregulatory biomarkers in bone and soft-tissue sarcomas","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Vancouver Coastal Health Research Institute; University of British Columbia; Vancouver Coastal Health","funders":"Icahn School of Medicine at Mount Sinai","keywords":"Sarcoma; Immune system; Immunohistochemistry; Immunotherapy; Pathology; Biomarker; Soft tissue; Cancer research; Biology; Medicine; Immunology","score_opus":0.010355229684844333,"score_gpt":0.2527382444821165,"score_spread":0.24238301479727217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954281788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99212587,0.004432626,0.0007217265,0.000052535852,0.000013135328,0.000013917402,0.00009404802,0.00001877813,0.0025273426],"genre_scores_gemma":[0.9974681,0.0010725632,0.00068629964,0.000024020528,0.00001929351,0.000018005907,0.00015138631,0.0000037936359,0.0005566606],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998412,0.000033987133,0.000019869018,0.00002086312,0.00004051104,0.00004346097],"domain_scores_gemma":[0.9998148,0.000042377145,0.000056989997,0.000009050434,0.00005412433,0.00002267939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031206227,0.00016794537,0.0001788988,0.0013758563,0.00018571544,0.00048605914,0.00012120602,0.00023428568,0.0009722483],"category_scores_gemma":[0.00049743534,0.000094713185,0.00011582167,0.00065428147,0.00018043237,0.00030898253,0.00023585254,0.00016496317,0.00020996536],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016657355,0.00014550629,0.18546806,0.00037400713,0.00009137501,0.0022268565,0.00055350206,0.00036039986,0.74098533,0.0012256078,0.00039796866,0.06650563],"study_design_scores_gemma":[0.00011037774,0.0018434366,0.6642701,0.00017159634,0.0003804734,0.016649567,0.0023452907,0.0037484646,0.28342402,0.0017645657,0.025251528,0.000040604154],"about_ca_topic_score_codex":0.00026489366,"about_ca_topic_score_gemma":0.0002956173,"teacher_disagreement_score":0.0013758563,"about_ca_system_score_codex":0.0002219372,"about_ca_system_score_gemma":0.00012626323,"threshold_uncertainty_score":0.0032524467},"labels":[],"label_agreement":null},{"id":"W2955057356","doi":"10.1038/s41379-019-0302-0","title":"A combination of the immunohistochemical markers CK7 and SATB2 is highly sensitive and specific for distinguishing primary ovarian mucinous tumors from colorectal and appendiceal metastases","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; Royal Alexandra Hospital; Vancouver General Hospital; University of British Columbia; BC Cancer Agency; Foothills Medical Centre; University of Calgary","funders":"National Cancer Institute; National Institutes of Health; Medical Research Council; Universität Heidelberg; Swedish Cancer Foundation; Cancer Research Society; NSW Ministry of Health; University of New South Wales; Ovarian Cancer Action; National Institute for Health and Care Research; Translational Cancer Research Network; National Health and Medical Research Council; Cancer Research UK; National Center for Research Resources; Cancer Institute NSW; Medical Research and Materiel Command; University of Pittsburgh","keywords":"Medicine; CDX2; PAX8; Pathology; Tissue microarray; Mucinous Tumor; Mucinous carcinoma; Immunohistochemistry; Ovarian tumor; Ovarian cancer; Adenocarcinoma; Internal medicine; Cancer; Biology","score_opus":0.008470072828496211,"score_gpt":0.22620158808482055,"score_spread":0.21773151525632434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955057356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9294423,0.032938138,0.023606561,0.0007361561,0.00034943374,0.00014183401,0.0006516765,0.00048855395,0.011645343],"genre_scores_gemma":[0.9799192,0.0042033964,0.01259877,0.00014362847,0.00017147147,0.00008181769,0.0010183683,0.00002632235,0.001837081],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993192,0.00016477793,0.00005792822,0.00009776044,0.00026026182,0.00010013749],"domain_scores_gemma":[0.9990702,0.0002653585,0.0001716559,0.00006261228,0.0002834406,0.0001468108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010581884,0.0007410135,0.0008608317,0.0029830206,0.00030079842,0.0006620015,0.000435626,0.00075367774,0.0016450447],"category_scores_gemma":[0.0010763295,0.0004339404,0.0004949272,0.0010477604,0.00048172066,0.00090669957,0.0005714189,0.0006366152,0.0007940381],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011947975,0.0001748315,0.18480393,0.00043145695,0.00051037176,0.0007923517,0.0000638304,0.0004058307,0.74686396,0.0002655674,0.0010077221,0.06348542],"study_design_scores_gemma":[0.00016942964,0.002443926,0.47892806,0.00016754678,0.0010621718,0.020146796,0.00039367954,0.015692685,0.46806607,0.0010248113,0.011789709,0.000115201095],"about_ca_topic_score_codex":0.00044518575,"about_ca_topic_score_gemma":0.001894099,"teacher_disagreement_score":0.0029830206,"about_ca_system_score_codex":0.00025963408,"about_ca_system_score_gemma":0.00033459137,"threshold_uncertainty_score":0.0055963397},"labels":[],"label_agreement":null},{"id":"W2955346378","doi":"10.1038/s41379-019-0313-x","title":"PAX8–GLIS3 gene fusion is a pathognomonic genetic alteration of hyalinizing trabecular tumors of the thyroid","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Cancer Institute; National Institutes of Health; Università degli Studi di Torino; Fondazione Umberto Veronesi; Ministero dell’Istruzione, dell’Università e della Ricerca; Associazione Italiana per la Ricerca sul Cancro; Dipartimenti di Eccellenza; Breast Cancer Research Foundation","keywords":"Pathognomonic; Pathology; Biology; Fusion gene; Thyroid; Medicine; Anatomy; Gene; Genetics; Disease","score_opus":0.010244328761897964,"score_gpt":0.2368977443391158,"score_spread":0.22665341557721785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955346378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992046,0.00041334573,0.0021717614,0.00022806729,0.000013940936,0.000017298673,0.00016333513,0.000100932826,0.0048453836],"genre_scores_gemma":[0.9988644,0.00008160317,0.00058978423,0.0000118189355,0.000008108577,0.0000029232306,0.000053642925,0.000004855174,0.00038281945],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99987745,0.000009393761,0.00001078622,0.000023894676,0.000049339633,0.000029194203],"domain_scores_gemma":[0.9998147,0.000036741643,0.000074891715,0.000015650352,0.000019488289,0.000038602564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009552434,0.00023652088,0.00014415741,0.0007595258,0.00029998962,0.00028091663,0.0002515242,0.0004116793,0.0023365226],"category_scores_gemma":[0.0003054523,0.00019698452,0.00016823356,0.00065650017,0.0006437724,0.00026245695,0.00032017767,0.00027752854,0.0003438049],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076276954,0.00003132958,0.15312193,0.0001677389,0.0000712314,0.18061179,0.00028538302,0.00052449136,0.6399182,0.0027190929,0.0008035244,0.02098246],"study_design_scores_gemma":[0.00007450561,0.000202105,0.27000445,0.000020856703,0.00014625493,0.5725482,0.00074149924,0.00458502,0.14230707,0.0033767135,0.0059551825,0.000038124068],"about_ca_topic_score_codex":0.0018496959,"about_ca_topic_score_gemma":0.0023540256,"teacher_disagreement_score":0.0023365226,"about_ca_system_score_codex":0.0003609092,"about_ca_system_score_gemma":0.00046348726,"threshold_uncertainty_score":0.0078164935},"labels":[],"label_agreement":null},{"id":"W2959118880","doi":"10.1038/s41379-019-0305-x","title":"Molecular characterization of gastric-type endocervical adenocarcinoma using next-generation sequencing","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gastric Cancer Management and Outcomes","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lakeridge Health; Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Pathology; DNA sequencing; Adenocarcinoma; Biology; Cytopathology; Medicine; Computational biology; Cancer; Internal medicine; Gene; Genetics; Cytology","score_opus":0.07273432257535298,"score_gpt":0.27480826643260065,"score_spread":0.20207394385724767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2959118880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96103275,0.011142757,0.016942555,0.0013605924,0.00018684618,0.00012904461,0.004527972,0.00019918014,0.004478191],"genre_scores_gemma":[0.9724205,0.0028869114,0.017397813,0.00093482377,0.000107244276,0.00008887895,0.0044214986,0.000058697187,0.0016836105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99959594,0.000059458038,0.000043685934,0.0001267328,0.000112030044,0.00006213679],"domain_scores_gemma":[0.9995839,0.00012282548,0.000087922606,0.00004438571,0.00012276717,0.000038229537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007240029,0.00036761744,0.00038708866,0.0014772044,0.00030669538,0.0010059654,0.00044849684,0.0007224084,0.0011358886],"category_scores_gemma":[0.0014691869,0.00020462493,0.00050684746,0.0007109698,0.00024031317,0.0004010872,0.00044070874,0.00058277114,0.00035879886],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090599986,0.00016818257,0.5989745,0.0006679067,0.00060921663,0.002610056,0.0005326644,0.0030082068,0.21612346,0.0020831935,0.0044325213,0.16988412],"study_design_scores_gemma":[0.000115610346,0.0006487779,0.7696803,0.0005075873,0.0011165513,0.015175102,0.001418084,0.03645608,0.106106274,0.0068889083,0.061788123,0.000098607365],"about_ca_topic_score_codex":0.002001374,"about_ca_topic_score_gemma":0.0036929739,"teacher_disagreement_score":0.002001374,"about_ca_system_score_codex":0.00041278038,"about_ca_system_score_gemma":0.00035862072,"threshold_uncertainty_score":0.003979385},"labels":[],"label_agreement":null},{"id":"W2965019135","doi":"10.1038/s41379-019-0327-4","title":"“Interchangeability” of PD-L1 immunohistochemistry assays: a meta-analysis of diagnostic accuracy","year":2019,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; McMaster University; BC Cancer Agency; McGill University Health Centre; Institut universitaire de cardiologie et de pneumologie de Québec; Dalhousie University; Hamilton Health Sciences; University of Toronto; Saskatchewan Health; University Health Network; Université Laval; University of Saskatchewan; Saskatchewan Health Authority","funders":"National Center for Advancing Translational Sciences","keywords":"Interchangeability; Medicine; Medical physics; Meta-analysis; Data extraction; Diagnostic accuracy; MEDLINE; Grading (engineering); Pathology; Data mining; Computer science; Internal medicine","score_opus":0.19305812754960316,"score_gpt":0.4155887077541432,"score_spread":0.22253058020454003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965019135","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011935106,0.9765926,0.0072003365,0.00085220207,0.0005575343,0.00038602774,0.0015081418,0.00009441999,0.0008736299],"genre_scores_gemma":[0.6899122,0.28036046,0.015916571,0.0040410007,0.0014846728,0.0031665107,0.0038953612,0.00035200463,0.00087117957],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9054748,0.05802546,0.01847033,0.0096056275,0.0068679894,0.0015558001],"domain_scores_gemma":[0.8220869,0.14929174,0.013007303,0.009440398,0.0056423787,0.0005313268],"candidate_categories":["metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.10518329,0.0038669307,0.015991248,0.008051016,0.00096210296,0.00676652,0.0031462007,0.0029542544,0.0025894076],"category_scores_gemma":[0.15890262,0.0021664845,0.0672235,0.009746145,0.0015320218,0.0043548523,0.0028959285,0.0033779817,0.0004681397],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029271948,0.000015031854,0.016288497,0.060837455,0.90535504,0.00010690062,0.00010036036,0.000727566,0.00025504714,0.00030253446,0.00068408274,0.012400335],"study_design_scores_gemma":[0.00047623515,0.00017151564,0.0076354095,0.0069034407,0.9814043,0.00011669676,0.000043980268,0.00040907596,0.0002453198,0.00079982623,0.0017623174,0.000031838987],"about_ca_topic_score_codex":0.0043560015,"about_ca_topic_score_gemma":0.0066522798,"teacher_disagreement_score":0.9840087,"about_ca_system_score_codex":0.0030815746,"about_ca_system_score_gemma":0.002423155,"threshold_uncertainty_score":0.55626905},"labels":[],"label_agreement":null},{"id":"W2965147634","doi":"10.1038/s41379-019-0341-6","title":"Endometrial tumors with yolk sac tumor-like morphologic patterns or immunophenotypes: an expanded appraisal","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Testicular diseases and treatments","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Yolk sac; Pathology; Immunohistochemistry; CD117; Carcinoma; Medicine; Endometrium; Biology; Internal medicine; Embryo; CD34","score_opus":0.019259847097892753,"score_gpt":0.28824308490347145,"score_spread":0.2689832378055787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965147634","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008812425,0.9810657,0.001438997,0.0018165956,0.0004936124,0.000017662926,0.000064240885,0.000031691343,0.006259051],"genre_scores_gemma":[0.0688286,0.9200677,0.0033945115,0.0016052622,0.0042588064,0.000018599872,0.00016171667,0.000017836017,0.0016469534],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99958426,0.000089090376,0.00009653788,0.000060906237,0.00011539987,0.000053866566],"domain_scores_gemma":[0.99809366,0.0011609116,0.00017764691,0.000078180936,0.0003798126,0.000109821696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015398316,0.0004968662,0.0008821263,0.0031966479,0.00023337624,0.0016180835,0.00043604415,0.0008161775,0.0016108052],"category_scores_gemma":[0.0017160501,0.00023756278,0.00048840034,0.0015539852,0.0007401299,0.001939615,0.000719294,0.0010076804,0.00043900203],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000490635,0.000113392816,0.02835571,0.006525297,0.00026356202,0.008605338,0.0005764409,0.0005313801,0.012624961,0.007558253,0.02357331,0.9107818],"study_design_scores_gemma":[0.000070652866,0.0006842816,0.10468348,0.007618215,0.0008199265,0.1510425,0.0016019141,0.0014579663,0.0028843503,0.0069445553,0.72205967,0.00013252354],"about_ca_topic_score_codex":0.00051833235,"about_ca_topic_score_gemma":0.0010586405,"teacher_disagreement_score":0.0031966479,"about_ca_system_score_codex":0.00041713598,"about_ca_system_score_gemma":0.000610462,"threshold_uncertainty_score":0.008143485},"labels":[],"label_agreement":null},{"id":"W2965248944","doi":"10.1038/s41379-019-0347-0","title":"Malignant mesothelioma in situ: morphologic features and clinical outcome","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Vancouver General Hospital; University Health Network; University of British Columbia; University of British Columbia Hospital","funders":"","keywords":"Mesothelioma; Medicine; Pathology; Mesothelium; BAP1; Peritoneal mesothelioma; Asbestos; Biopsy; Peritoneum","score_opus":0.026191104320423538,"score_gpt":0.32317676028213205,"score_spread":0.2969856559617085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965248944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984439,0.00031432454,0.00011841613,0.000033461572,0.000008397781,0.00000597353,0.00012763971,0.000007581267,0.0009402752],"genre_scores_gemma":[0.999648,0.00008031622,0.000034302353,0.000006257924,0.000017650267,0.0000030423505,0.000106686704,0.0000014733524,0.0001024083],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99974674,0.000051170813,0.00003389789,0.000048101396,0.000041674084,0.00007847834],"domain_scores_gemma":[0.9989887,0.00025759055,0.00028629918,0.00006630512,0.00009729903,0.0003038718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004035812,0.00038326255,0.00034596474,0.0012629319,0.00046042877,0.00062682864,0.00032893813,0.00045307534,0.0010042622],"category_scores_gemma":[0.0015769453,0.00015680493,0.00031757387,0.00067928364,0.00041586568,0.0004918723,0.00067003595,0.00033323336,0.00034464925],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007854901,0.00008075715,0.97519284,0.000019281,0.00003975994,0.013170734,0.00018749884,0.000171517,0.0046478896,0.000067503315,0.00011381971,0.005522857],"study_design_scores_gemma":[0.000013803609,0.0003277357,0.9679844,0.00000684469,0.000049691647,0.029742528,0.00044567505,0.00043508745,0.0005615901,0.00014464742,0.00027520474,0.000012780456],"about_ca_topic_score_codex":0.0005177263,"about_ca_topic_score_gemma":0.00060414505,"teacher_disagreement_score":0.0012629319,"about_ca_system_score_codex":0.00026295887,"about_ca_system_score_gemma":0.00017241004,"threshold_uncertainty_score":0.0033595562},"labels":[],"label_agreement":null},{"id":"W2966196066","doi":"10.1038/s41379-019-0344-3","title":"Challenges with colorectal cancer staging: results of an international study","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University; University Health Network","funders":"","keywords":"Medicine; Subspecialty; Colorectal cancer; Surgical pathology; Stage (stratigraphy); Cancer staging; General surgery; Cancer; Pathology; Internal medicine","score_opus":0.04130860817169667,"score_gpt":0.33601125585070635,"score_spread":0.29470264767900967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966196066","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98705274,0.0021649413,0.00035330185,0.00079287397,0.000042978994,0.00005733356,0.0009153638,0.0000037231687,0.008616738],"genre_scores_gemma":[0.9963883,0.0017117773,0.00032203947,0.00019533519,0.000038536153,0.00004219037,0.0007318078,0.0000100866355,0.0005600193],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99831676,0.0008149697,0.00017883276,0.00020642421,0.0002893812,0.00019360495],"domain_scores_gemma":[0.9922438,0.0031169094,0.0022777987,0.00043582573,0.001232027,0.0006935421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0042274124,0.00025251444,0.00024744298,0.0011130266,0.0006081098,0.0009302881,0.0004306359,0.00032661538,0.002056973],"category_scores_gemma":[0.011534477,0.00014863015,0.0004132243,0.0030545827,0.0008679541,0.0011759009,0.0012276769,0.00044106686,0.00030104743],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046582482,0.000200241,0.9690064,0.000101684716,0.00007696793,0.00015236178,0.0027054462,0.00015451795,0.00016431417,0.00023973119,0.0012584613,0.025474105],"study_design_scores_gemma":[0.000030149095,0.0003002475,0.98510265,0.00014857377,0.000114716764,0.0004401833,0.007923486,0.00013669622,0.000115264746,0.00013665398,0.0055341725,0.000017235887],"about_ca_topic_score_codex":0.008640105,"about_ca_topic_score_gemma":0.013138577,"teacher_disagreement_score":0.008640105,"about_ca_system_score_codex":0.0007349793,"about_ca_system_score_gemma":0.0011696456,"threshold_uncertainty_score":0.022356987},"labels":[],"label_agreement":null},{"id":"W2971416747","doi":"10.1038/s41379-019-0352-3","title":"Localized malignant mesothelioma, an unusual and poorly characterized neoplasm of serosal origin: best current evidence from the literature and the International Mesothelioma Panel","year":2019,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Toronto General Hospital; University Health Network","funders":"National Cancer Institute","keywords":"Medicine; Mesothelioma; Histopathology; Pathology; Neoplasm; Immunophenotyping; Radiology","score_opus":0.09042821524082122,"score_gpt":0.3496694527682425,"score_spread":0.2592412375274213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971416747","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009506717,0.9993807,0.000034452496,0.00012374856,0.000076579505,0.0000016419007,0.000019496389,0.0000023395075,0.00026591704],"genre_scores_gemma":[0.000690166,0.9988452,0.00007563948,0.000120122764,0.00011590717,0.0000016065252,0.000036646168,5.9201506e-7,0.00011406363],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.9997497,0.000030860938,0.00007329203,0.00005282613,0.00007622023,0.000017027678],"domain_scores_gemma":[0.9991629,0.00041737445,0.00018550488,0.000020678082,0.00015678731,0.00005679977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070251914,0.00062324305,0.0016621983,0.0033974599,0.00020027968,0.0009962854,0.00064616016,0.00072279474,0.0020622225],"category_scores_gemma":[0.0011401593,0.00020845255,0.00048473867,0.0033013255,0.00035707204,0.0010780046,0.00059849734,0.00096670084,0.0008623543],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009303967,0.000026687521,0.00085544435,0.03658698,0.00017664215,0.00069841905,0.00006374296,0.00015336096,0.0016794765,0.0007456559,0.02248554,0.936435],"study_design_scores_gemma":[0.00003357252,0.00013006125,0.006215299,0.019107545,0.0010450995,0.010456577,0.00017734188,0.00011270299,0.0007373614,0.0010314024,0.96091044,0.000042535186],"about_ca_topic_score_codex":0.0011045765,"about_ca_topic_score_gemma":0.003011566,"teacher_disagreement_score":0.0033974599,"about_ca_system_score_codex":0.0003305026,"about_ca_system_score_gemma":0.0013142508,"threshold_uncertainty_score":0.00689888},"labels":[],"label_agreement":null},{"id":"W2972054878","doi":"10.1038/s41379-019-0351-4","title":"Histologic spectrum of polymorphous adenocarcinoma of the salivary gland harbor genetic alterations affecting PRKD genes","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institutes of Health; National Cancer Institute; Cycle for Survival; Breast Cancer Research Foundation","keywords":"Pathology; Salivary gland; Adenocarcinoma; Biology; Metastasis; Hematopathology; Phenotype; Gene; Medicine; Cytogenetics; Cancer; Genetics","score_opus":0.013159691457567745,"score_gpt":0.23140282784514074,"score_spread":0.218243136387573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972054878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99447495,0.00042678497,0.0012605325,0.00006714478,0.000007074727,0.000019444362,0.00018411792,0.00004879081,0.0035111299],"genre_scores_gemma":[0.9987326,0.00019165981,0.0005298861,0.00001482641,0.0000075834155,0.000003974705,0.000106412495,0.000007022857,0.00040594625],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998435,0.000017577751,0.000017226508,0.00003398339,0.0000472379,0.000040489813],"domain_scores_gemma":[0.99975437,0.000050811203,0.00006183874,0.00003237219,0.000043704316,0.00005689451],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023672597,0.00042079776,0.000218027,0.0014480712,0.00038100596,0.00040976724,0.00021435447,0.00019551803,0.0025165682],"category_scores_gemma":[0.00045830765,0.00016193614,0.00022330774,0.0006635123,0.00040696087,0.00026740172,0.00047744636,0.00021327622,0.0003643411],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009159482,0.00010678523,0.5829893,0.00010906691,0.000086045904,0.1274105,0.0004463009,0.0004828421,0.2549288,0.001379205,0.000516738,0.030628543],"study_design_scores_gemma":[0.000035977602,0.00026590744,0.6326871,0.00002539312,0.00017324707,0.32519504,0.00096340844,0.0012716876,0.034209017,0.0015765693,0.0035760286,0.00002061943],"about_ca_topic_score_codex":0.0006375447,"about_ca_topic_score_gemma":0.00116864,"teacher_disagreement_score":0.0025165682,"about_ca_system_score_codex":0.00018472467,"about_ca_system_score_gemma":0.00020448216,"threshold_uncertainty_score":0.008418739},"labels":[],"label_agreement":null},{"id":"W2973452191","doi":"10.1038/s41379-019-0367-9","title":"Interobserver variability in upfront dichotomous histopathological assessment of ductal carcinoma in situ of the breast: the DCISion study","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"National Center for Advancing Translational Sciences; National Cancer Institute; Fondation contre le Cancer","keywords":"Medicine; Ductal carcinoma; Pathology; Nuclear atypia; Breast cancer; Atypia; Concordance; Carcinoma in situ; Lobular carcinoma; Carcinoma; Cancer; Internal medicine; Immunohistochemistry","score_opus":0.009089854671710616,"score_gpt":0.25939656820706086,"score_spread":0.2503067135353502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973452191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98657936,0.0012780592,0.0074992636,0.000045036406,0.00010112204,0.00007642408,0.0003171,0.000075065866,0.004028545],"genre_scores_gemma":[0.99783427,0.000070338014,0.0013131952,0.000028881697,0.000030072453,0.000039952032,0.0002428802,0.000049326227,0.00039094622],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.979875,0.00997154,0.0023152973,0.0036293047,0.003571964,0.00063688355],"domain_scores_gemma":[0.91125065,0.05841244,0.0063924966,0.013135505,0.009838559,0.0009703407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.020126136,0.00055221096,0.0007089221,0.002589192,0.00078066014,0.0017773946,0.0010196854,0.0008952637,0.0009753491],"category_scores_gemma":[0.048740767,0.0004410431,0.0007640739,0.0012595232,0.0010662758,0.0009686715,0.0022082785,0.0006611046,0.0003765316],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002336036,0.00008523227,0.95895976,0.00011566245,0.000752217,0.00014964452,0.0016802888,0.000799749,0.006059791,0.00038138012,0.00050401915,0.02817611],"study_design_scores_gemma":[0.000053334785,0.00044607293,0.9839443,0.00003816084,0.00047347517,0.000881454,0.001025702,0.004853021,0.0054075345,0.0005493126,0.0022528474,0.00007480514],"about_ca_topic_score_codex":0.0017497686,"about_ca_topic_score_gemma":0.0039422316,"teacher_disagreement_score":0.020126136,"about_ca_system_score_codex":0.0008226713,"about_ca_system_score_gemma":0.00035522555,"threshold_uncertainty_score":0.10643846},"labels":[],"label_agreement":null},{"id":"W2975523866","doi":"10.1038/s41379-019-0377-7","title":"Do not break a sweat: avoiding pitfalls in the diagnosis of sweat gland tumors","year":2019,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Sweat gland; Medicine; Pathology; Eccrine sweat gland; Myoepithelial cell; Disease; Adenocarcinoma; SWEAT; Cancer; Immunohistochemistry; Internal medicine","score_opus":0.10069822622192245,"score_gpt":0.37128469208567927,"score_spread":0.2705864658637568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2975523866","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000057674024,0.9987986,0.0000907454,0.000502737,0.0002028976,0.0000014724627,0.0000061704927,0.000003613565,0.00033606027],"genre_scores_gemma":[0.0009181653,0.9975026,0.00022791505,0.000606856,0.00051467505,0.0000020071582,0.000015946589,0.0000013739931,0.00021043145],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995346,0.00009910828,0.00008761301,0.000072224066,0.00017433868,0.000032234224],"domain_scores_gemma":[0.9983399,0.0010668902,0.00018967268,0.00003418003,0.0002982431,0.00007105911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009121139,0.0007747812,0.0016455945,0.0032760936,0.00035109368,0.001317018,0.0012243399,0.0015472767,0.0020494265],"category_scores_gemma":[0.0022940603,0.00033934726,0.00065997336,0.0021151528,0.0010500702,0.0022354417,0.0007457479,0.002637829,0.0013135537],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046436515,0.000028047205,0.0004333408,0.015232484,0.00009107666,0.00067474745,0.000065428554,0.00020870272,0.0006266652,0.00178696,0.032036476,0.9487697],"study_design_scores_gemma":[0.00002302221,0.00008555331,0.002591112,0.013804319,0.0002949975,0.012673337,0.00021707924,0.0001687588,0.000492084,0.0041104686,0.9654853,0.000054004075],"about_ca_topic_score_codex":0.0018270279,"about_ca_topic_score_gemma":0.004259064,"teacher_disagreement_score":0.0032760936,"about_ca_system_score_codex":0.0009031413,"about_ca_system_score_gemma":0.0012037571,"threshold_uncertainty_score":0.0068559647},"labels":[],"label_agreement":null},{"id":"W2976721221","doi":"10.1038/s41379-019-0374-x","title":"Malignant transformation of liver fatty acid binding protein-deficient hepatocellular adenomas: histopathologic spectrum of a rare phenomenon","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cholangiocarcinoma and Gallbladder Cancer Studies","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"Institut National de la Santé et de la Recherche Médicale","keywords":"Hepatocellular adenoma; Hepatocellular carcinoma; Fatty acid-binding protein; Pathology; Malignant transformation; Fatty liver; Adenoma; Atypia; Steatosis; Medicine; Nuclear atypia; Biology; Internal medicine; Immunohistochemistry; Gene; Biochemistry","score_opus":0.02175763410263052,"score_gpt":0.22573567127171784,"score_spread":0.20397803716908733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2976721221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940158,0.00091578386,0.0012109162,0.00004422931,0.0000095596415,0.00002140912,0.000059140108,0.000041753166,0.0036813042],"genre_scores_gemma":[0.9992866,0.00020414157,0.00029024607,0.000012608375,0.000017311782,0.0000038817475,0.00003195285,0.0000054041207,0.00014797805],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99974245,0.00005349816,0.000039848925,0.000044808563,0.000046063484,0.00007328514],"domain_scores_gemma":[0.9990004,0.0003882546,0.00016416328,0.00017673647,0.00010114973,0.00016942366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040950556,0.00039482868,0.00026202414,0.0020468107,0.00067712745,0.00052902644,0.00029686507,0.0004863233,0.001774947],"category_scores_gemma":[0.0013809523,0.0002900314,0.000263345,0.00070196297,0.00078752375,0.0005845312,0.0007173769,0.0003154796,0.00045105343],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014711964,0.000120655284,0.43539637,0.00015123104,0.000047175043,0.4311426,0.00092600053,0.00014238215,0.11497045,0.0011360894,0.00022713708,0.014268779],"study_design_scores_gemma":[0.00002569654,0.0003683428,0.20339093,0.0000163792,0.000088344284,0.7628039,0.00074745977,0.0005592009,0.029676003,0.00060836726,0.0016941434,0.000021211728],"about_ca_topic_score_codex":0.0002709179,"about_ca_topic_score_gemma":0.00030434885,"teacher_disagreement_score":0.0020468107,"about_ca_system_score_codex":0.00015898177,"about_ca_system_score_gemma":0.00016468059,"threshold_uncertainty_score":0.005937755},"labels":[],"label_agreement":null},{"id":"W2982042305","doi":"10.1038/s41379-019-0389-3","title":"Pathologic separation of idiopathic pulmonary fibrosis from fibrotic hypersensitivity pneumonitis","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia Hospital; St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Hypersensitivity pneumonitis; Medicine; Idiopathic pulmonary fibrosis; Fibrosis; Pulmonary fibrosis; Lung biopsy; Pathology; Lung; Metaplasia; Ground-glass opacity; Interstitial lung disease; Radiology; Biopsy; Internal medicine","score_opus":0.010851375853507253,"score_gpt":0.2543402152605068,"score_spread":0.24348883940699956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982042305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7458696,0.10301856,0.07124413,0.008649687,0.0034677947,0.00035142677,0.00040010663,0.0005206258,0.06647815],"genre_scores_gemma":[0.9766442,0.0058720876,0.010833701,0.0009569834,0.0020200275,0.00004893105,0.0001884147,0.000029453713,0.0034062928],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99972254,0.000075287746,0.000041128496,0.00004037445,0.000063309824,0.00005739959],"domain_scores_gemma":[0.99931014,0.0002297441,0.00012981593,0.000116196024,0.00013211487,0.00008195325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000755189,0.0003983327,0.00036489277,0.0021800324,0.0004950266,0.000895166,0.00046300437,0.00093448296,0.0011815188],"category_scores_gemma":[0.0010531513,0.00026937356,0.00023907292,0.00065339817,0.0026991232,0.0011754973,0.00064604596,0.0011383216,0.00062885985],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018782325,0.00031425495,0.115495265,0.0015650303,0.000090935675,0.16351958,0.0019508579,0.0005140883,0.46041927,0.13833666,0.006310595,0.10960527],"study_design_scores_gemma":[0.00012249652,0.0009042277,0.20000772,0.00046515214,0.0001378916,0.59037,0.0018437962,0.0029043288,0.08351457,0.04403533,0.075628474,0.0000661065],"about_ca_topic_score_codex":0.00022672882,"about_ca_topic_score_gemma":0.0002550604,"teacher_disagreement_score":0.0021800324,"about_ca_system_score_codex":0.00020875824,"about_ca_system_score_gemma":0.0003747699,"threshold_uncertainty_score":0.003993869},"labels":[],"label_agreement":null},{"id":"W2987044308","doi":"10.1038/s41379-019-0411-9","title":"Cyclin D1 immunohistochemical staining to separate benign from malignant mesothelial proliferations","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Staining; Pathology; Cyclin D1; Immunohistochemistry; Mesothelial Cell; Biology; Epithelium; Tissue microarray; Medicine; Cell; Cell cycle","score_opus":0.009379858991142062,"score_gpt":0.2682472326910154,"score_spread":0.25886737369987334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987044308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9306042,0.019425398,0.023876887,0.0008240281,0.0002525469,0.0002153944,0.0006048647,0.0004029825,0.023793645],"genre_scores_gemma":[0.9745466,0.003403015,0.016573302,0.00013615981,0.000080367696,0.000107170265,0.00044302212,0.000044033033,0.0046662586],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997093,0.00005191792,0.00004771154,0.000062374325,0.00005840273,0.00007029413],"domain_scores_gemma":[0.9996475,0.00010309527,0.00004607857,0.000050263792,0.0000979974,0.000055013465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007590175,0.00031251152,0.00019804838,0.0026068029,0.00048046713,0.00053661846,0.00030992483,0.00042314612,0.0029012356],"category_scores_gemma":[0.0006427541,0.00027718293,0.00025553626,0.0005920127,0.00050687505,0.00051898323,0.00035192224,0.0004251425,0.0005267311],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079381804,0.00007841116,0.06794687,0.0008665541,0.00011871276,0.002952834,0.00045157337,0.00019272715,0.8791003,0.0022496488,0.0009811495,0.044267446],"study_design_scores_gemma":[0.00014004872,0.0005203814,0.1734739,0.00023219844,0.000456761,0.028989354,0.0013818517,0.006344112,0.7148094,0.0019905707,0.07161537,0.00004601079],"about_ca_topic_score_codex":0.0008091334,"about_ca_topic_score_gemma":0.002175669,"teacher_disagreement_score":0.0029012356,"about_ca_system_score_codex":0.00040061527,"about_ca_system_score_gemma":0.00034093423,"threshold_uncertainty_score":0.0097055435},"labels":[],"label_agreement":null},{"id":"W2987800544","doi":"10.1038/s41379-019-0403-9","title":"Dataset for the reporting of urinary tract carcinoma—biopsy and transurethral resection specimen: recommendations from the International Collaboration on Cancer Reporting (ICCR)","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; McGill University Health Centre; University of Toronto","funders":"","keywords":"Medicine; Cancer; Surgical pathology; Lymphovascular invasion; Biopsy; Pathology; General surgery; Internal medicine; Metastasis","score_opus":0.07907730078428353,"score_gpt":0.3735865966636038,"score_spread":0.29450929587932023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987800544","genre_codex":"dataset","genre_gemma":"methods","domain_codex":null,"domain_gemma":"reporting","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":"reporting","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010568657,0.00014459658,0.0021444075,0.000973953,0.0001525474,0.0006668178,0.9929415,0.00042905926,0.0014903625],"genre_scores_gemma":[0.0032556017,0.00016887624,0.006220157,0.0008726333,0.00006113726,0.0023413298,0.9863448,0.0001447618,0.0005906954],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.98051995,0.004744777,0.008334851,0.0020534217,0.0030768476,0.0012701326],"domain_scores_gemma":[0.8888553,0.023113867,0.023357946,0.021538494,0.03888102,0.0042533763],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.023053756,0.0014186923,0.002899752,0.0060749133,0.0012797407,0.003191612,0.0057860836,0.0034491413,0.018001447],"category_scores_gemma":[0.08172829,0.0010793523,0.0030124993,0.009246536,0.000725466,0.0018914822,0.0037741761,0.0034257793,0.010819423],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010384463,0.00012920759,0.026312318,0.003907611,0.0007410599,0.00010202501,0.00017258848,0.0008089719,0.0013891361,0.003826068,0.9452706,0.016302058],"study_design_scores_gemma":[0.00122618,0.00014091935,0.114891864,0.004007228,0.000709683,0.000362732,0.0002765508,0.00097411167,0.0026283476,0.003065367,0.87149066,0.00022633906],"about_ca_topic_score_codex":0.0389674,"about_ca_topic_score_gemma":0.032131203,"teacher_disagreement_score":0.97694623,"about_ca_system_score_codex":0.0044294395,"about_ca_system_score_gemma":0.012690255,"threshold_uncertainty_score":0.12192136},"labels":[],"label_agreement":null},{"id":"W2991363870","doi":"10.1038/s41379-019-0416-4","title":"Frequent overexpression of klotho in fusion-negative phosphaturic mesenchymal tumors with tumorigenic implications","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Parathyroid Disorders and Treatments","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Alexandra Hospital; University of Alberta","funders":"","keywords":"Biology; Exon; Molecular biology; Exome sequencing; Fusion gene; Genetics; Cancer research; Gene; Mutation","score_opus":0.009982536725891365,"score_gpt":0.2631303059051513,"score_spread":0.2531477691792599,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991363870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99592495,0.00069631625,0.0014810605,0.00006560444,0.00002287023,0.00001129722,0.00031989109,0.00007708912,0.0014008785],"genre_scores_gemma":[0.9989806,0.0001241371,0.000365312,0.000012780241,0.000008998869,0.0000042920788,0.0001726495,0.0000081261105,0.00032302638],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99970394,0.000019267505,0.000031088926,0.00006693617,0.00011145665,0.00006731963],"domain_scores_gemma":[0.99944586,0.000115750794,0.00016576172,0.00007068299,0.00006731534,0.00013467352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017627406,0.00026677147,0.00022001484,0.001147718,0.0004282619,0.00066220784,0.00021704988,0.0005040848,0.0021632893],"category_scores_gemma":[0.00061731477,0.00017562814,0.00023527395,0.0007090029,0.00043582683,0.00028608795,0.00045771146,0.00030599674,0.00048758052],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057136215,0.000028866072,0.05385222,0.000090435824,0.000042353684,0.02752595,0.00028480773,0.00012535813,0.91122884,0.0006015805,0.0002495099,0.0053985734],"study_design_scores_gemma":[0.00004280983,0.0002803243,0.35578346,0.00002402857,0.00027666517,0.24350083,0.0012468736,0.0019374898,0.3854828,0.0015328123,0.009849118,0.0000427552],"about_ca_topic_score_codex":0.00045078588,"about_ca_topic_score_gemma":0.00054836605,"teacher_disagreement_score":0.0021632893,"about_ca_system_score_codex":0.00019594746,"about_ca_system_score_gemma":0.0001949079,"threshold_uncertainty_score":0.0072369576},"labels":[],"label_agreement":null},{"id":"W2995380760","doi":"10.1038/s41379-019-0432-4","title":"Comprehensive analysis of 204 sporadic hydatidiform moles: revisiting risk factors and their correlations with the molar genotypes","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gestational Trophoblastic Disease Studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Ottawa Fertility Centre; Centre Hospitalier de l’Université de Montréal; McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Molar pregnancy; Miscarriage; Genotype; Gynecology; Products of conception; Choriocarcinoma; Obstetrics; Pregnancy; Population; Medicine; Biology; Partial Hydatidiform Mole; Gestation; Pathology; Genetics; Fetus; Gene","score_opus":0.011830934834774869,"score_gpt":0.23310604056493464,"score_spread":0.22127510573015977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995380760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780613,0.0009092559,0.00029020716,0.000024311586,0.0000032769287,0.000008238669,0.0005784219,0.000007792892,0.00037230155],"genre_scores_gemma":[0.99827886,0.00043066108,0.00038594287,0.000014651379,0.000007530226,0.0000073915326,0.0006518866,0.000006029877,0.00021711843],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99947613,0.00012777289,0.0000903425,0.00012576603,0.00010107214,0.00007901168],"domain_scores_gemma":[0.99916005,0.0002709277,0.000232105,0.00012784435,0.00011506952,0.000094012525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067987916,0.00029032826,0.00046290085,0.0025641785,0.00057831075,0.00054161606,0.00035429513,0.0002561678,0.0012348796],"category_scores_gemma":[0.0017664866,0.00029274335,0.00045814388,0.0023096325,0.0002649798,0.0003481398,0.00056936604,0.00026197894,0.00023618962],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013816427,0.000020751548,0.99026746,0.000033738415,0.00009483737,0.00072291755,0.00021067857,0.000051690342,0.0025527568,0.000054641772,0.000108002154,0.0057443054],"study_design_scores_gemma":[0.0000034592606,0.000063736166,0.99513066,0.000013858252,0.0001639518,0.0022503163,0.00043598193,0.00014085276,0.00059540884,0.00007754904,0.0011185122,0.000005784813],"about_ca_topic_score_codex":0.0026553874,"about_ca_topic_score_gemma":0.0033389295,"teacher_disagreement_score":0.0026553874,"about_ca_system_score_codex":0.00016496853,"about_ca_system_score_gemma":0.0005467528,"threshold_uncertainty_score":0.005279839},"labels":[],"label_agreement":null},{"id":"W2995811766","doi":"10.1038/s41379-019-0434-2","title":"Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"KWF Kankerbestrijding","keywords":"Cytokeratin; Tumor budding; Kappa; Categorization; Digital image analysis; Immunohistochemistry; Colorectal cancer; Pathology; Biology; Medicine; Cancer; Artificial intelligence; Computer science; Internal medicine; Mathematics; Metastasis","score_opus":0.02034512352745948,"score_gpt":0.2911442806440596,"score_spread":0.27079915711660013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995811766","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8306677,0.0031659591,0.15269619,0.00036826302,0.00018166838,0.00044920557,0.00034199434,0.00059180375,0.011537215],"genre_scores_gemma":[0.9728011,0.00022583854,0.025843402,0.000064944434,0.000025105619,0.000092332295,0.00017396483,0.00007305409,0.00070021825],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9754674,0.009949964,0.0034436993,0.004870601,0.005542515,0.0007259264],"domain_scores_gemma":[0.9289472,0.044912595,0.0066276756,0.008892897,0.009715174,0.0009045444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0355391,0.00078126113,0.0008424628,0.0024321412,0.0009196093,0.001850256,0.0010837776,0.00074823614,0.0012922242],"category_scores_gemma":[0.04448556,0.00042241105,0.000892397,0.001223218,0.0018459231,0.0016819502,0.0024859076,0.00062550703,0.0006882351],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023943915,0.0002195381,0.70211315,0.0018017213,0.0018892286,0.0007347756,0.010265355,0.0039638486,0.10836119,0.002227865,0.0016745798,0.1643543],"study_design_scores_gemma":[0.0000668353,0.0009871374,0.91038036,0.00036562752,0.0005748175,0.0029019476,0.0037630782,0.029122354,0.035123415,0.00860502,0.007910715,0.00019861541],"about_ca_topic_score_codex":0.0011555023,"about_ca_topic_score_gemma":0.0024858804,"teacher_disagreement_score":0.0355391,"about_ca_system_score_codex":0.00047347462,"about_ca_system_score_gemma":0.0005263541,"threshold_uncertainty_score":0.18795103},"labels":[],"label_agreement":null},{"id":"W2997782168","doi":"10.1038/s41379-019-0447-x","title":"Detection of the KIT mutation in myelodysplastic and/or myeloproliferative neoplasms and acute myeloid leukemia with myelodysplasia-related changes predicts concurrent systemic mastocytosis","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Medicine; Systemic mastocytosis; Myeloid leukemia; Myelodysplastic syndromes; Myeloid; Bone marrow; Leukemia; Internal medicine; Myeloproliferative neoplasm; Pathology; Oncology; Myelofibrosis","score_opus":0.009209745278668215,"score_gpt":0.19713512044709874,"score_spread":0.18792537516843053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997782168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979121,0.00032864127,0.00018178656,0.000068937035,0.000015680676,0.000008431625,0.000052060626,0.000007376405,0.0014248852],"genre_scores_gemma":[0.9995658,0.0001006277,0.00014153357,0.000021855152,0.000028142598,0.0000024257529,0.00005199137,0.000001560319,0.00008610107],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996051,0.000090579684,0.00005587471,0.00006501204,0.00010444386,0.000079027755],"domain_scores_gemma":[0.9976719,0.00077383727,0.0006078963,0.00012939108,0.00018701279,0.0006300977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005680023,0.00055732124,0.00032992807,0.001532828,0.00033216728,0.00065726455,0.00045377857,0.0010681358,0.002499564],"category_scores_gemma":[0.0037480996,0.00033390912,0.0003216861,0.00068881083,0.00084964756,0.0006870165,0.00039305084,0.00059796707,0.0006446571],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032668057,0.00004312367,0.983179,0.000011703824,0.000016050228,0.0073805666,0.00003671769,0.000057073707,0.007329779,0.000052707437,0.00008520558,0.001481445],"study_design_scores_gemma":[0.00001624564,0.00039134265,0.93536276,0.0000142290655,0.00005901841,0.05992212,0.00023027095,0.0009917261,0.002514267,0.0001521789,0.0003373761,0.000008478246],"about_ca_topic_score_codex":0.0006221721,"about_ca_topic_score_gemma":0.00080099254,"teacher_disagreement_score":0.002499564,"about_ca_system_score_codex":0.00017300156,"about_ca_system_score_gemma":0.00031817998,"threshold_uncertainty_score":0.008361816},"labels":[],"label_agreement":null},{"id":"W2998261418","doi":"10.1038/s41379-019-0442-2","title":"Immunohistochemical analysis of IDH2 R172 hotspot mutations in breast papillary neoplasms: applications in the diagnosis of tall cell carcinoma with reverse polarity","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"National Cancer Institute; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"IDH2; Pathology; Immunohistochemistry; Biology; Hematopathology; Carcinoma; Cancer research; Medicine; Cytogenetics; Gene; Mutation; IDH1; Genetics","score_opus":0.014787670861828747,"score_gpt":0.2401120872383072,"score_spread":0.22532441637647846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998261418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9776938,0.004026939,0.010817057,0.00022378625,0.00006358589,0.000060358398,0.0001802866,0.00011987751,0.006814277],"genre_scores_gemma":[0.99182254,0.0011218071,0.0060817064,0.00003250651,0.000030314686,0.000017939596,0.0000924042,0.000012999212,0.0007877735],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99974984,0.000048338738,0.000027510741,0.000047709465,0.00006952552,0.000057039037],"domain_scores_gemma":[0.9996786,0.00010595668,0.00004407649,0.000028886116,0.0000751101,0.00006744181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007163597,0.00033421678,0.00018762758,0.002203215,0.00030364544,0.000509083,0.0003745745,0.0004166879,0.0017279859],"category_scores_gemma":[0.0005606215,0.00022055148,0.00024893924,0.0007046218,0.0004956758,0.00035626907,0.00043660525,0.0002934358,0.00031934422],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006000815,0.000046384306,0.13365728,0.00020748866,0.00008646692,0.0076407585,0.00029810343,0.0002434716,0.8295176,0.00083910546,0.00028825688,0.026575092],"study_design_scores_gemma":[0.0001045544,0.00061113684,0.320039,0.000086532855,0.0006604607,0.050145276,0.0017161495,0.011932135,0.59856683,0.0020912683,0.0139864655,0.00006017301],"about_ca_topic_score_codex":0.00063203985,"about_ca_topic_score_gemma":0.0010763777,"teacher_disagreement_score":0.002203215,"about_ca_system_score_codex":0.00026984166,"about_ca_system_score_gemma":0.00027210946,"threshold_uncertainty_score":0.0057807565},"labels":[],"label_agreement":null},{"id":"W2998535613","doi":"10.1038/s41379-019-0436-0","title":"Significantly greater prevalence of DICER1 alterations in uterine embryonal rhabdomyosarcoma compared to adenosarcoma","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Mount Sinai Hospital; Toronto General Hospital; University of Toronto; University Health Network; McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Physicians' Services Incorporated Foundation; Government of Canada","keywords":"Embryonal rhabdomyosarcoma; Pathology; Uterus; Medicine; Rhabdomyosarcoma; Gynecology; Biology; Sarcoma; Internal medicine","score_opus":0.04489702048384966,"score_gpt":0.2995850543506538,"score_spread":0.25468803386680416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998535613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972728,0.0007657779,0.00015866612,0.000027838392,0.000006775544,0.0000056120634,0.0001823514,0.000005962166,0.0015742619],"genre_scores_gemma":[0.99897504,0.0002740831,0.00013489781,0.000013101123,0.000007089594,0.0000048718125,0.00013011554,0.0000024083683,0.0004583893],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997234,0.00005174184,0.000038231152,0.000079448226,0.000055827306,0.000051384737],"domain_scores_gemma":[0.99906033,0.00031506168,0.00031412742,0.0000742379,0.00010961881,0.00012659968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000457254,0.00013660971,0.00015455956,0.0015044155,0.00030967614,0.0003544252,0.00016143463,0.00021350021,0.0047644386],"category_scores_gemma":[0.0016047399,0.00011368347,0.00012316476,0.00064961833,0.00031914943,0.00028925986,0.00031556835,0.00018437028,0.000337068],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039356865,0.00002275691,0.9496256,0.00013821213,0.000060468217,0.0023922673,0.0004698654,0.000057845682,0.035956275,0.00020076726,0.00019017782,0.010492117],"study_design_scores_gemma":[0.0000034909638,0.0001140393,0.98129886,0.00001886715,0.00004943252,0.01037533,0.00065257313,0.00007882603,0.00541248,0.00010855224,0.0018818128,0.00000563424],"about_ca_topic_score_codex":0.0005220894,"about_ca_topic_score_gemma":0.0007433603,"teacher_disagreement_score":0.0047644386,"about_ca_system_score_codex":0.0001354983,"about_ca_system_score_gemma":0.0001956232,"threshold_uncertainty_score":0.01593864},"labels":[],"label_agreement":null},{"id":"W2998544433","doi":"10.1038/s41379-019-0443-1","title":"Pathological assessment of endoscopic resections of the gastrointestinal tract: a comprehensive clinicopathologic review","year":2020,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Esophageal Cancer Research and Treatment","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Medicine; Lymphovascular invasion; Muscularis mucosae; Pathological; Esophagus; Dysplasia; Pathology; Stage (stratigraphy); Lymph node; Radiology; Metastasis; Surgery; Cancer; Internal medicine; Biology","score_opus":0.16897155839370012,"score_gpt":0.4673119699133717,"score_spread":0.2983404115196716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998544433","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036086084,0.9986972,0.00021091063,0.0001314015,0.00008271786,0.000006056332,0.000023803053,0.000006735623,0.0004803537],"genre_scores_gemma":[0.0019825439,0.99704933,0.0003942268,0.00020426714,0.00013903357,0.0000050432404,0.000055019027,0.0000017542349,0.00016889295],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996086,0.00006293169,0.00010416183,0.000080539554,0.00011507287,0.000028688955],"domain_scores_gemma":[0.9988619,0.00064608536,0.0001756022,0.000029255198,0.0002238154,0.000063301064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010605842,0.0008351058,0.0012825631,0.0045746434,0.00028482953,0.0010572523,0.0010068538,0.0007158806,0.0015855666],"category_scores_gemma":[0.0019164225,0.0003834186,0.0007168794,0.0031508417,0.0006731062,0.001697097,0.00080931815,0.00088872534,0.00062959205],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007729329,0.0000451755,0.00240324,0.025108451,0.00018894598,0.0009879022,0.00011785234,0.0003152963,0.0021029979,0.0009025278,0.017434416,0.95031595],"study_design_scores_gemma":[0.000038092392,0.00023493628,0.019031756,0.034141917,0.0018632391,0.027873194,0.00060483225,0.00043711002,0.0016584301,0.0024409655,0.91154367,0.00013195231],"about_ca_topic_score_codex":0.0012648097,"about_ca_topic_score_gemma":0.002832003,"teacher_disagreement_score":0.0045746434,"about_ca_system_score_codex":0.00050386455,"about_ca_system_score_gemma":0.0014839739,"threshold_uncertainty_score":0.005608976},"labels":[],"label_agreement":null},{"id":"W2999209334","doi":"10.1038/s41379-020-0458-7","title":"Poorly differentiated thyroid carcinoma of childhood and adolescence: a distinct entity characterized by DICER1 mutations","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":158,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University; Jewish General Hospital","funders":"National Cancer Institute; Foundation for the National Institutes of Health","keywords":"Pathology; Thyroid carcinoma; Thyroid; Medicine; Hematopathology; Carcinoma; Biology; Genetics; Internal medicine; Gene; Cytogenetics","score_opus":0.013051364007170817,"score_gpt":0.23133429635956237,"score_spread":0.21828293235239155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999209334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99537,0.0009911243,0.00054616586,0.00014238284,0.000013567122,0.000017523336,0.00017291482,0.000022128599,0.0027242408],"genre_scores_gemma":[0.9989687,0.0003477783,0.00033997645,0.000022889404,0.00002623933,0.00000400678,0.000098426535,0.000006156976,0.0001858947],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997644,0.00001895182,0.000023022594,0.000054869404,0.000043153825,0.00009561859],"domain_scores_gemma":[0.99920565,0.00024404882,0.0001936628,0.00005844344,0.000066732406,0.00023151029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015737099,0.0005148712,0.00040091842,0.0015743528,0.00064158667,0.00056859053,0.00038687247,0.0007323819,0.0015539859],"category_scores_gemma":[0.0011595843,0.00031952694,0.00020699424,0.00095500064,0.0006740167,0.0005573406,0.00070030655,0.0005114899,0.00029496162],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001817736,0.00004667647,0.4517331,0.00006410516,0.00002138564,0.5092421,0.0006435283,0.00022406821,0.030423852,0.0011266862,0.0003960948,0.00589667],"study_design_scores_gemma":[0.000008818357,0.00006341139,0.15768814,0.000016720216,0.000038570524,0.83530414,0.0006972417,0.0005544484,0.0037370983,0.00031137024,0.0015638489,0.000016115691],"about_ca_topic_score_codex":0.0019983535,"about_ca_topic_score_gemma":0.0026314012,"teacher_disagreement_score":0.0019983535,"about_ca_system_score_codex":0.00038510273,"about_ca_system_score_gemma":0.0006749369,"threshold_uncertainty_score":0.005198598},"labels":[],"label_agreement":null},{"id":"W2999302806","doi":"10.1038/s41379-020-0460-0","title":"Correction to: Pathological assessment of endoscopic resections of the gastrointestinal tract: a comprehensive clinicopathologic review","year":2020,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Gastric Cancer Management and Outcomes","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Pathological; Medicine; Gastrointestinal tract; Dysplasia; Stage (stratigraphy); General surgery; Pathology; Endoscopic mucosal resection; Endoscopy; Radiology; Internal medicine; Biology","score_opus":0.06502395005871142,"score_gpt":0.36637980738689246,"score_spread":0.30135585732818104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999302806","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024402462,0.003937556,0.0005474299,0.056694426,0.9346302,0.000027964263,0.00063263334,0.00013359934,0.0031521302],"genre_scores_gemma":[0.016093697,0.027558649,0.0067466293,0.105027474,0.75430226,0.00020914547,0.0024578753,0.001117571,0.08648676],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99668425,0.0005691229,0.00078071916,0.00042848598,0.0012167813,0.00032061586],"domain_scores_gemma":[0.96913415,0.0069588018,0.0022682832,0.0014211824,0.018240592,0.0019770085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037870277,0.0014720691,0.0013667705,0.0046787816,0.0014446396,0.002782805,0.0021497756,0.003610127,0.027663235],"category_scores_gemma":[0.05425829,0.0007974599,0.0010273972,0.0019772989,0.0018351637,0.002014369,0.0015272734,0.0069853975,0.016946563],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000340382,0.000006726442,0.0002723883,0.00026964193,0.0000118677635,0.00056095637,0.000026849964,0.00004523715,0.0000545064,0.0004644178,0.9824777,0.015775725],"study_design_scores_gemma":[0.00003889603,0.00002143085,0.0016816054,0.0013492679,0.000048219,0.0028561715,0.00012652819,0.00013969194,0.00029782165,0.00087896275,0.9925132,0.000048275913],"about_ca_topic_score_codex":0.008571515,"about_ca_topic_score_gemma":0.012539941,"teacher_disagreement_score":0.027663235,"about_ca_system_score_codex":0.0024735949,"about_ca_system_score_gemma":0.0054613254,"threshold_uncertainty_score":0.09254271},"labels":[],"label_agreement":null},{"id":"W3004860042","doi":"10.1038/s41379-020-0495-2","title":"NTRK3 overexpression in undifferentiated sarcomas with YWHAE and BCOR genetic alterations","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"National Cancer Institute","keywords":"Pathology; Sarcoma; Immunohistochemistry; Trk receptor; Synovial sarcoma; Biology; Downregulation and upregulation; Fusion gene; Cancer research; Medicine; Gene","score_opus":0.0253124727274846,"score_gpt":0.25700338302490294,"score_spread":0.23169091029741834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004860042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99576735,0.0008405637,0.0006161424,0.000052501873,0.000015083294,0.000012974495,0.00021643283,0.000025459629,0.0024534727],"genre_scores_gemma":[0.99852353,0.00022835661,0.0003839941,0.000012621548,0.0000058581795,0.000006103318,0.00016444287,0.0000056407234,0.00066957145],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99977154,0.000020251511,0.00003696661,0.000042118343,0.00006977179,0.00005942551],"domain_scores_gemma":[0.9997973,0.00003493782,0.000070788126,0.000021072241,0.0000330451,0.00004297163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002705689,0.00020174493,0.000194972,0.0008055768,0.00026000442,0.0005405111,0.00019958691,0.00035245172,0.002087568],"category_scores_gemma":[0.00049087073,0.00015815698,0.00018498288,0.0005315649,0.00032119852,0.00031547752,0.00035150727,0.00018251692,0.00036031753],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00191262,0.00007692735,0.18874693,0.00018879285,0.00013110653,0.0375108,0.0003672589,0.0003417404,0.7457834,0.0009648276,0.0006162322,0.023359383],"study_design_scores_gemma":[0.00008634237,0.00035913533,0.6156834,0.00003405396,0.00029321414,0.1094511,0.0009715481,0.002694412,0.25771943,0.0012333187,0.011432716,0.000041394822],"about_ca_topic_score_codex":0.0009776549,"about_ca_topic_score_gemma":0.0012559006,"teacher_disagreement_score":0.002087568,"about_ca_system_score_codex":0.00034326696,"about_ca_system_score_gemma":0.00020649335,"threshold_uncertainty_score":0.006983578},"labels":[],"label_agreement":null},{"id":"W3005713823","doi":"10.1038/s41379-020-0492-5","title":"Smooth muscle tumors of the gastrointestinal tract: an analysis of prognostic features in 407 cases","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gastrointestinal Tumor Research and Treatment","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Advancing Translational Sciences; National Institute of Biomedical Imaging and Bioengineering; National Cancer Institute","keywords":"Medicine; Smooth Muscle Tumor; Pathology; Gastrointestinal tract; Atypia; Univariate analysis; Stomach; Nuclear atypia; Esophagus; Metastasis; Cancer; Gastroenterology; Internal medicine; Immunohistochemistry; Multivariate analysis","score_opus":0.0363613808205591,"score_gpt":0.3025560762847837,"score_spread":0.2661946954642246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005713823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988399,0.00046121748,0.00010375291,0.000015414567,0.0000033498875,0.0000045166053,0.00014931516,0.0000031004092,0.0004194546],"genre_scores_gemma":[0.998906,0.0003398494,0.00008516663,0.000007491408,0.000014655034,0.00001017503,0.0004635937,0.0000029896596,0.00017012941],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99956685,0.00005917144,0.0000498035,0.000105159066,0.00010633941,0.00011276994],"domain_scores_gemma":[0.99929833,0.00023989983,0.00017310608,0.00005983676,0.00006761209,0.00016116467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035417068,0.00035370118,0.00040034592,0.0020231842,0.00076137297,0.00066355214,0.0003773635,0.00048287827,0.0016717123],"category_scores_gemma":[0.0013343163,0.00046398587,0.00042933103,0.002115797,0.00054336735,0.00046584717,0.0005787263,0.00027542585,0.00054377335],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025240085,0.000035661684,0.9915524,0.000015171731,0.00004881133,0.002824819,0.00016717873,0.00011316044,0.0011346968,0.000044374658,0.00012741961,0.0036838509],"study_design_scores_gemma":[0.000014081604,0.00011240145,0.99052536,0.0000130112385,0.000075509415,0.007138596,0.0005097564,0.00034421982,0.00034070012,0.00007445852,0.0008401641,0.00001177924],"about_ca_topic_score_codex":0.0014565713,"about_ca_topic_score_gemma":0.001367021,"teacher_disagreement_score":0.0020231842,"about_ca_system_score_codex":0.0002957072,"about_ca_system_score_gemma":0.00032072086,"threshold_uncertainty_score":0.005592406},"labels":[],"label_agreement":null},{"id":"W3006486601","doi":"10.1038/s41379-020-0497-0","title":"PD-L1 in small bowel adenocarcinoma is associated with etiology and tumor-infiltrating lymphocytes, in addition to microsatellite instability","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Dipartimento di Scienze Biomediche Avanzate, Università degli Studi di Napoli Federico II; Ministero della Salute; Dipartimenti di Eccellenza; Fondazione IRCCS Policlinico San Matteo; Università degli Studi di Pavia; Ministero dell’Istruzione, dell’Università e della Ricerca; Università degli Studi di Napoli Federico II","keywords":"Microsatellite instability; Etiology; Pathology; Adenocarcinoma; Medicine; Biology; Microsatellite; Internal medicine; Cancer; Genetics; Gene","score_opus":0.02562394659204816,"score_gpt":0.2394008688870945,"score_spread":0.21377692229504633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006486601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986204,0.000624998,0.0001836593,0.000042711657,0.000009183788,0.0000034107027,0.000082608705,0.000012246329,0.00042080926],"genre_scores_gemma":[0.9994019,0.00009118872,0.000103985374,0.000013681029,0.000010438743,0.0000027470353,0.00010894977,0.0000032709888,0.0002637393],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997658,0.00004453355,0.000035841567,0.00006120713,0.000049657177,0.00004283297],"domain_scores_gemma":[0.999271,0.00015528889,0.00032685307,0.000049294704,0.00006591801,0.0001317373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034099907,0.0002463841,0.00022535637,0.0008810347,0.0002878867,0.0006047284,0.0002664987,0.00043144025,0.001646734],"category_scores_gemma":[0.0013573355,0.0002110977,0.00027848728,0.0006927348,0.0002813629,0.00030455724,0.00033525837,0.00045780162,0.00025997864],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001892765,0.000070342154,0.9620798,0.00006220355,0.0000927734,0.0016682587,0.00007483372,0.00015140747,0.024624864,0.000098290824,0.0001804856,0.009003916],"study_design_scores_gemma":[0.000026982245,0.0003152116,0.9885052,0.000011039254,0.00010692416,0.0055880775,0.0001463053,0.00088907644,0.0031834575,0.0001979654,0.0010208298,0.000008870451],"about_ca_topic_score_codex":0.00039822143,"about_ca_topic_score_gemma":0.00054711517,"teacher_disagreement_score":0.001646734,"about_ca_system_score_codex":0.00023103741,"about_ca_system_score_gemma":0.00015270061,"threshold_uncertainty_score":0.00550884},"labels":[],"label_agreement":null},{"id":"W3010961770","doi":"10.1038/s41379-020-0524-1","title":"Major p53 immunohistochemical patterns in in situ and invasive squamous cell carcinomas of the vulva and correlation with TP53 mutation status","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":196,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; Vancouver General Hospital; University of British Columbia","funders":"Carraresi Foundation","keywords":"Immunohistochemistry; Pathology; In situ hybridization; Biology; Vulva; Vulvar intraepithelial neoplasia; Carcinoma in situ; Intraepithelial neoplasia; Carcinoma; Medicine; Cancer; Gene expression; Gene","score_opus":0.016230085906195266,"score_gpt":0.25812786620091394,"score_spread":0.24189778029471867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010961770","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983094,0.0005274172,0.00026752494,0.000019812656,0.0000045603933,0.0000036967692,0.000043371623,0.000008285304,0.0008159972],"genre_scores_gemma":[0.99924636,0.00022055455,0.00010645292,0.000007417284,0.0000057657326,0.0000035793355,0.000043313124,0.0000025526695,0.00036408962],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998198,0.000035822042,0.000023921046,0.000033454136,0.000029052877,0.000057904093],"domain_scores_gemma":[0.9994836,0.0001726241,0.00011708381,0.000036516565,0.0000678825,0.00012216542],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031155333,0.0003111351,0.00017081854,0.0018564467,0.0002566487,0.0004339046,0.00021998839,0.00028868046,0.0021241657],"category_scores_gemma":[0.0008187699,0.00023218685,0.00019487835,0.0005640878,0.0005260587,0.00036511093,0.0002546772,0.0002450102,0.00028552883],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025551808,0.00014077022,0.5522061,0.000107989734,0.00012452867,0.005131655,0.00057263364,0.00017170656,0.42259344,0.00031971806,0.00017162274,0.015904646],"study_design_scores_gemma":[0.000020764273,0.00037060102,0.95691645,0.000012283409,0.000088632216,0.011781963,0.0007071655,0.0003982262,0.028604653,0.00024521665,0.0008428773,0.000011184619],"about_ca_topic_score_codex":0.00063557154,"about_ca_topic_score_gemma":0.0008666889,"teacher_disagreement_score":0.0021241657,"about_ca_system_score_codex":0.00017611346,"about_ca_system_score_gemma":0.00012423507,"threshold_uncertainty_score":0.007106006},"labels":[],"label_agreement":null},{"id":"W3014442068","doi":"10.1038/s41379-020-0525-0","title":"Clonal evaluation of prostate cancer molecular heterogeneity in biopsy samples by dual immunohistochemistry and dual RNA in situ hybridization","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"U.S. Department of Defense","keywords":"Biopsy; Prostate cancer; Pathology; In situ hybridization; Immunohistochemistry; Cancer; Biology; Prostate; Erg; Fluorescence in situ hybridization; Medicine; Gene expression; Gene; Genetics","score_opus":0.04376199581856844,"score_gpt":0.35606273157434615,"score_spread":0.3123007357557777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014442068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9654862,0.0016506165,0.028314902,0.00009601155,0.00003404848,0.00011190982,0.00022532814,0.00019319677,0.0038878415],"genre_scores_gemma":[0.97578615,0.00043775755,0.02220902,0.000050038296,0.00003572953,0.00011495332,0.00029619565,0.000039936793,0.0010303239],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992125,0.00018836849,0.000070774935,0.00022470315,0.00016962618,0.00013397385],"domain_scores_gemma":[0.9991374,0.0003761637,0.00010737962,0.00010960804,0.00019605354,0.00007327097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012657419,0.0002428799,0.00023669009,0.0020376018,0.00038143407,0.00058778917,0.0003535018,0.00042669877,0.0019543087],"category_scores_gemma":[0.0011118471,0.000297502,0.00020806394,0.0005627327,0.00039776516,0.00042658445,0.00050004286,0.00048473798,0.00030996886],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000301876,0.000030323803,0.023971401,0.00009160979,0.000030601477,0.00019590519,0.0001904342,0.000105773375,0.96581405,0.00054626854,0.000055817858,0.008665917],"study_design_scores_gemma":[0.000055603934,0.00068043725,0.22285323,0.00004949116,0.00034389892,0.005951345,0.0008567162,0.013375555,0.74653643,0.0011896747,0.008070674,0.00003696659],"about_ca_topic_score_codex":0.00043131132,"about_ca_topic_score_gemma":0.0009713124,"teacher_disagreement_score":0.0020376018,"about_ca_system_score_codex":0.00025145948,"about_ca_system_score_gemma":0.0001742756,"threshold_uncertainty_score":0.006694019},"labels":[],"label_agreement":null},{"id":"W3014505012","doi":"10.1038/s41379-020-0527-y","title":"p53 Immunohistochemical patterns in HPV-related neoplasms of the female lower genital tract can be mistaken for TP53 null or missense mutational patterns","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Immunohistochemistry; Pathology; Staining; Biology; Vulva; In situ hybridization; Cervix; HPV infection; Intraepithelial neoplasia; Cancer; Medicine; Cervical cancer; Messenger RNA; Gene; Prostate","score_opus":0.05449979731027508,"score_gpt":0.3242065407308091,"score_spread":0.269706743420534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014505012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98867667,0.0018364222,0.0031102302,0.00021992683,0.00009042562,0.000022911612,0.00009078257,0.00010857347,0.005844002],"genre_scores_gemma":[0.99762934,0.00067479955,0.0011229501,0.000046804424,0.00002635937,0.0000040268574,0.0000403998,0.000016771934,0.00043852188],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996753,0.000054573167,0.00005161353,0.000053887245,0.00007336455,0.0000912993],"domain_scores_gemma":[0.9991297,0.00031854512,0.0002003194,0.00011492115,0.00010866766,0.00012791912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000596569,0.0006494351,0.00024551176,0.0022947197,0.00032328698,0.0006668955,0.0005044006,0.00067296764,0.0030520468],"category_scores_gemma":[0.0028376523,0.00035777775,0.00025568102,0.00080039847,0.00086599216,0.0007758493,0.0005602914,0.00035086632,0.0011571021],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013816495,0.00009798169,0.35413703,0.0004198642,0.00010347252,0.3135094,0.0005405547,0.0002893469,0.293114,0.00076524337,0.0009322328,0.03470929],"study_design_scores_gemma":[0.00003408241,0.00033316284,0.2510458,0.000114555,0.00028064317,0.66092044,0.0010525153,0.0023006485,0.07805538,0.0015318762,0.00430124,0.000029666797],"about_ca_topic_score_codex":0.00045464153,"about_ca_topic_score_gemma":0.0006868666,"teacher_disagreement_score":0.0030520468,"about_ca_system_score_codex":0.00016787653,"about_ca_system_score_gemma":0.00015963054,"threshold_uncertainty_score":0.010210156},"labels":[],"label_agreement":null},{"id":"W3015422734","doi":"10.1038/s41379-020-0538-8","title":"Transcriptomic data helps refining classification of pulmonary carcinoid tumors with increased mitotic counts","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds Joseph Maisin","keywords":"Pathology; Neuroendocrine tumors; Immunohistochemistry; Grading (engineering); Mitotic index; Carcinoid tumors; Transcriptome; Medicine; Lung cancer; Lung; Mitosis; Biology; Internal medicine; Gene expression; Gene","score_opus":0.08836739385405379,"score_gpt":0.3162009704702468,"score_spread":0.22783357661619302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015422734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9374965,0.0086405715,0.031035084,0.001968173,0.00042918863,0.00018185022,0.012051326,0.00059561315,0.007601854],"genre_scores_gemma":[0.9642935,0.0023713505,0.020129483,0.0004331057,0.0002574003,0.000115915,0.0107939355,0.000119384626,0.0014859245],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994691,0.000082379986,0.000068587164,0.00017882165,0.00011218282,0.000088869514],"domain_scores_gemma":[0.9985642,0.0005065297,0.00027151706,0.00014431856,0.0003945708,0.00011879701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011577493,0.0005713285,0.0005635174,0.002672879,0.0006106904,0.0017511302,0.0004026704,0.0005501198,0.0030985742],"category_scores_gemma":[0.002817603,0.00015487128,0.0006027007,0.0014620069,0.0003763653,0.00078948255,0.0007077054,0.000702419,0.0011216422],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008684019,0.00013213165,0.47449648,0.000937242,0.00037265054,0.0014870157,0.0005710429,0.0015155363,0.38837227,0.0015017788,0.0043192306,0.1254262],"study_design_scores_gemma":[0.00008667594,0.0003750571,0.864797,0.00048828108,0.0012951784,0.00419024,0.0019190465,0.017927712,0.053954314,0.009443649,0.045432083,0.00009070844],"about_ca_topic_score_codex":0.0010727809,"about_ca_topic_score_gemma":0.0035978786,"teacher_disagreement_score":0.0030985742,"about_ca_system_score_codex":0.00032782985,"about_ca_system_score_gemma":0.00049354124,"threshold_uncertainty_score":0.010365784},"labels":[],"label_agreement":null},{"id":"W3015897305","doi":"10.1038/s41379-020-0516-1","title":"DICER1-associated central nervous system sarcoma in children: comprehensive clinicopathologic and genetic analysis of a newly described rare tumor","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University Health Centre","funders":"","keywords":"Pathology; Malignancy; Medicine; Sarcoma; Immunohistochemistry; Cortical dysplasia; Biology; Epilepsy","score_opus":0.026382597684799985,"score_gpt":0.255246729903926,"score_spread":0.22886413221912602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015897305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948901,0.0010794098,0.0010322398,0.00013057093,0.000009823069,0.00002958803,0.0005860146,0.000027750833,0.002214359],"genre_scores_gemma":[0.99784064,0.0005338471,0.0010560354,0.00003572806,0.000016878912,0.000007558629,0.0002724911,0.000008928983,0.00022783686],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99969566,0.000024097371,0.00003808228,0.00009460631,0.00007524739,0.00007233201],"domain_scores_gemma":[0.99936074,0.00022085827,0.00017774901,0.0000465459,0.000059721682,0.00013437685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002532061,0.00062689104,0.0003572663,0.0016226015,0.0005873988,0.0004286963,0.00038932296,0.0005595709,0.001043307],"category_scores_gemma":[0.0009897235,0.00035207425,0.00025707873,0.0010137496,0.00072579965,0.00041093925,0.00057752454,0.0003862806,0.00019145888],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014348637,0.000048803835,0.40450945,0.00018026278,0.00007679233,0.53661764,0.0006882198,0.00091337366,0.042457324,0.0007410624,0.0010590091,0.012564639],"study_design_scores_gemma":[0.000009906676,0.00007611466,0.21304798,0.00003253594,0.00010771182,0.7734767,0.00043626886,0.00068874157,0.008464709,0.00024359199,0.003395568,0.00002014312],"about_ca_topic_score_codex":0.0011553377,"about_ca_topic_score_gemma":0.0023791692,"teacher_disagreement_score":0.0016226015,"about_ca_system_score_codex":0.00039856095,"about_ca_system_score_gemma":0.0006027432,"threshold_uncertainty_score":0.0034902692},"labels":[],"label_agreement":null},{"id":"W3016290335","doi":"10.1038/s41379-020-0535-y","title":"High-grade transformation of low-grade endometrial stromal sarcomas lacking YWHAE and BCOR genetic abnormalities","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Spinal Cord Injury BC; University of British Columbia; University of Toronto; Vancouver General Hospital; Mount Sinai Hospital","funders":"National Cancer Institute; Memorial Sloan-Kettering Cancer Center","keywords":"Endometrial stromal sarcoma; Fluorescence in situ hybridization; Pathology; Hematopathology; Population; Stromal cell; Medicine; Fusion gene; Sarcoma; Biology; Cytogenetics; Chromosome; Gene","score_opus":0.03074148063206304,"score_gpt":0.2617418576167103,"score_spread":0.2310003769846473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016290335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99566734,0.00033222724,0.0007650461,0.000048423375,0.000009061221,0.000020216325,0.00008537243,0.000027502145,0.0030447952],"genre_scores_gemma":[0.998637,0.00010121289,0.000322209,0.000015922104,0.0000025285287,0.0000037962275,0.00013424446,0.0000048535694,0.00077824557],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998273,0.000031071362,0.000019164614,0.000027015769,0.0000452536,0.000050163355],"domain_scores_gemma":[0.99981886,0.000034378143,0.000039566436,0.000036291516,0.000018959323,0.000051984847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019778626,0.00015556096,0.00014542497,0.00055784156,0.00018401885,0.0004176411,0.00016583594,0.00026572665,0.002244529],"category_scores_gemma":[0.0004822253,0.00013571812,0.00017575396,0.00028006086,0.00025786526,0.0001791733,0.00033565625,0.00025973585,0.0003731704],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017151409,0.00019607997,0.17905484,0.000092982365,0.00006270225,0.026940895,0.00046493154,0.0002741816,0.7545067,0.0015953274,0.00048563667,0.034610514],"study_design_scores_gemma":[0.00012092966,0.0011100279,0.5695554,0.000026198504,0.00016165858,0.16084194,0.0014325987,0.0036695446,0.2480212,0.0019386406,0.013089584,0.0000321889],"about_ca_topic_score_codex":0.00065554166,"about_ca_topic_score_gemma":0.0009189257,"teacher_disagreement_score":0.002244529,"about_ca_system_score_codex":0.00019467647,"about_ca_system_score_gemma":0.00014411192,"threshold_uncertainty_score":0.007508695},"labels":[],"label_agreement":null},{"id":"W3022898912","doi":"10.1038/s41379-020-0557-5","title":"Undifferentiated round cell sarcoma with BCOR internal tandem duplications (ITD) or YWHAE fusions: a clinicopathologic and molecular study","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Cancer Institute; Cycle for Survival","keywords":"Sarcoma; Pathology; Medicine; Metastasis; Hematopathology; Disease; Biology; Cancer; Oncology; Internal medicine; Cytogenetics; Genetics; Gene","score_opus":0.019118144493689416,"score_gpt":0.26068137558712906,"score_spread":0.24156323109343963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022898912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948272,0.0005378325,0.0007991049,0.000056529894,0.000009186262,0.000033526285,0.00011293807,0.000029899451,0.0035937028],"genre_scores_gemma":[0.998909,0.00016429486,0.00033316875,0.000016412987,0.000017220522,0.0000077432815,0.00007861774,0.0000050357185,0.00046847903],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99973065,0.000028310977,0.0000367382,0.00007253742,0.000051557996,0.00008016071],"domain_scores_gemma":[0.999355,0.00017211714,0.00014886653,0.00009959107,0.00005122052,0.00017314826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045487084,0.00057115074,0.00032230958,0.0015737113,0.00048676136,0.0006236343,0.00042359717,0.0007086145,0.0026499373],"category_scores_gemma":[0.0007875211,0.00039995683,0.00020899725,0.0009282752,0.0010483488,0.0006329091,0.0006943227,0.0003078493,0.0007420806],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009744842,0.0001554105,0.23746869,0.00012626618,0.00006444526,0.6625558,0.00090013136,0.0004785193,0.08561535,0.002137931,0.0004604439,0.009062543],"study_design_scores_gemma":[0.000049305774,0.00032405613,0.17843732,0.000013832322,0.00011346219,0.8009465,0.00075799756,0.0016260406,0.013317895,0.00069406256,0.00368623,0.000033363933],"about_ca_topic_score_codex":0.00089347543,"about_ca_topic_score_gemma":0.0010743805,"teacher_disagreement_score":0.0026499373,"about_ca_system_score_codex":0.00034544006,"about_ca_system_score_gemma":0.00038491574,"threshold_uncertainty_score":0.00886488},"labels":[],"label_agreement":null},{"id":"W3023697651","doi":"10.1038/s41379-020-0550-z","title":"Evaluation of glucocorticoid-induced TNF receptor (GITR) expression in breast cancer and across multiple tumor types","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Vancouver General Hospital; Centre for Advancing Health Outcomes; Spinal Cord Injury BC; University of British Columbia","funders":"Canadian Cancer Society Research Institute","keywords":"Medicine; Tumor-infiltrating lymphocytes; Cancer; Melanoma; Cancer research; FOXP3; Tumor microenvironment; Breast cancer; Tissue microarray; Immunotherapy; Stromal cell; Immunohistochemistry; Immune system; Pathology; Internal medicine; Immunology","score_opus":0.03562230690817827,"score_gpt":0.2991260194381572,"score_spread":0.26350371252997895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3023697651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99502534,0.0019612107,0.0010805131,0.00004686921,0.0000294286,0.000025820176,0.00047925417,0.000038175906,0.0013133612],"genre_scores_gemma":[0.9952242,0.0011093873,0.0009699466,0.000039873874,0.000012528505,0.000028273245,0.0005747277,0.000013688043,0.0020273672],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997663,0.000036690566,0.000014166722,0.000035625566,0.00005462438,0.000092676004],"domain_scores_gemma":[0.99990094,0.000017670298,0.00002067712,0.000014719815,0.000023318655,0.000022679831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018173405,0.00016606618,0.00019281564,0.0004909236,0.00021242202,0.00031590578,0.00013461562,0.00021642495,0.001172091],"category_scores_gemma":[0.00014266619,0.000109190034,0.00027253423,0.00051031116,0.00024205391,0.00017190249,0.00016861626,0.00042229609,0.00024982827],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033757175,0.000020749141,0.0015502893,0.000027420332,0.000008339482,0.000049276594,0.000030843446,0.000030680127,0.99670863,0.00003454286,0.000024722125,0.0011769834],"study_design_scores_gemma":[0.000023839739,0.0014864661,0.10695406,0.000011954061,0.00011808512,0.0012215611,0.0005207636,0.0005785675,0.88504463,0.00006961649,0.003960014,0.000010475655],"about_ca_topic_score_codex":0.0016022025,"about_ca_topic_score_gemma":0.0022071819,"teacher_disagreement_score":0.0016022025,"about_ca_system_score_codex":0.0002762872,"about_ca_system_score_gemma":0.00019196814,"threshold_uncertainty_score":0.003921032},"labels":[],"label_agreement":null},{"id":"W3024840842","doi":"10.1038/s41379-020-0547-7","title":"Minimalist approaches to cancer tissue-of-origin classification by DNA methylation","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"DNA methylation; Profiling (computer programming); Computational biology; Methylation; CpG site; Classifier (UML); Pathology; Biology; Computer science; Bioinformatics; Artificial intelligence; Medicine; DNA; Genetics; Gene; Gene expression","score_opus":0.14834647949956464,"score_gpt":0.3139195153499896,"score_spread":0.16557303585042493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3024840842","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02407523,0.0005435281,0.9716931,0.00048888364,0.00003394128,0.000037569287,0.00019154993,0.0002653613,0.0026707926],"genre_scores_gemma":[0.4668508,0.0010919366,0.5254319,0.00033135328,0.0002931171,0.0002218645,0.00074111397,0.00017364907,0.004864295],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885106,0.0003457869,0.00008000971,0.00034158156,0.0002913059,0.00009029271],"domain_scores_gemma":[0.99758554,0.0012891548,0.00018648797,0.0005692739,0.00028124813,0.0000883531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018356468,0.0003971597,0.0012218247,0.0016365937,0.0009226227,0.0017923452,0.0020616278,0.0007485496,0.0015147922],"category_scores_gemma":[0.0035232324,0.00051404396,0.001057482,0.00090070796,0.0018331566,0.001397116,0.003499286,0.001802619,0.00042343384],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003895537,0.00009915929,0.008781542,0.00049756136,0.00023688715,0.00017841338,0.00068497175,0.046011057,0.040285736,0.6270777,0.002799337,0.27295816],"study_design_scores_gemma":[0.00001630404,0.00009491013,0.003129194,0.000039623978,0.00007269341,0.00027572064,0.00013205536,0.19669247,0.010848556,0.7794375,0.009221462,0.000039591305],"about_ca_topic_score_codex":0.0013011687,"about_ca_topic_score_gemma":0.002643827,"teacher_disagreement_score":0.0020616278,"about_ca_system_score_codex":0.0011953162,"about_ca_system_score_gemma":0.0010657524,"threshold_uncertainty_score":0.009707928},"labels":[],"label_agreement":null},{"id":"W3028591440","doi":"10.1038/s41379-020-0573-5","title":"Differentiated exophytic vulvar intraepithelial lesion: Clinicopathologic and molecular analysis documenting its relationship with verrucous carcinoma of the vulva","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Vulva; Pathology; Verrucous carcinoma; Medicine; Lesion; Vulvar Carcinoma; Vulvar intraepithelial neoplasia; Carcinoma","score_opus":0.04173651051098119,"score_gpt":0.2821462125797288,"score_spread":0.24040970206874757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3028591440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99736744,0.0006174098,0.0003106732,0.00005015388,0.0000075976955,0.000010300083,0.00005416679,0.000008860837,0.0015733029],"genre_scores_gemma":[0.9994723,0.00011526146,0.00015312857,0.000008936907,0.000010268381,0.000002102101,0.000036927784,0.0000013821208,0.00019972664],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99977833,0.000033989858,0.000023028493,0.000053815194,0.000038570248,0.00007230819],"domain_scores_gemma":[0.9994765,0.00017307272,0.00010449777,0.000088992645,0.000051354215,0.00010559755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002610788,0.0003245262,0.00028849364,0.0010932111,0.0005118545,0.0008122811,0.00037913708,0.00058140384,0.0018453775],"category_scores_gemma":[0.0011611168,0.0002456197,0.00017017248,0.00062090263,0.0006116174,0.00040262454,0.00035889485,0.0003613483,0.00032561706],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010816512,0.00036541026,0.57921505,0.00013535495,0.00009029423,0.2773338,0.00061864697,0.0004178955,0.12519476,0.001342726,0.00033703036,0.013867329],"study_design_scores_gemma":[0.000035143603,0.00041381785,0.5669292,0.00002150212,0.00016318909,0.40748763,0.00091777067,0.0018111842,0.018434148,0.000769979,0.0029914952,0.00002482997],"about_ca_topic_score_codex":0.0005068308,"about_ca_topic_score_gemma":0.0005477804,"teacher_disagreement_score":0.0018453775,"about_ca_system_score_codex":0.00021505765,"about_ca_system_score_gemma":0.00024295009,"threshold_uncertainty_score":0.006173432},"labels":[],"label_agreement":null},{"id":"W3029272675","doi":"10.1038/s41379-020-0540-1","title":"Interpretable multimodal deep learning for real-time pan-tissue pan-disease pathology search on social media","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Health Sciences Centre; Spinal Cord Injury BC","funders":"National Institute of General Medical Sciences; U.S. Department of Health and Human Services; National Cancer Institute; National Institutes of Health; Chiba University; Weill Cornell Medical College","keywords":"Pathology; Digital pathology; Social media; Medicine; Computer science; Artificial intelligence; World Wide Web","score_opus":0.03251994904213234,"score_gpt":0.2930630265485612,"score_spread":0.26054307750642886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3029272675","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38436735,0.003375572,0.48299152,0.003320283,0.00064336794,0.00072702556,0.02027762,0.09086582,0.013431561],"genre_scores_gemma":[0.80391574,0.0004661978,0.16848086,0.0012741998,0.0001816061,0.00043978007,0.014564689,0.000866862,0.009810093],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99953043,0.00009689109,0.000023396806,0.0001463277,0.000108488355,0.00009462333],"domain_scores_gemma":[0.9992731,0.00033859527,0.00007655015,0.00010118854,0.00015758882,0.00005285838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088276283,0.001389358,0.00061930396,0.0015950865,0.00042257636,0.00088907604,0.0013337301,0.0017650343,0.0073549077],"category_scores_gemma":[0.0036133153,0.00037309428,0.00075946207,0.0008055837,0.00032505198,0.0013823616,0.0015218366,0.0010624111,0.0030749706],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013953265,0.0010974836,0.016346531,0.0005983223,0.00033518588,0.0009885358,0.00034910018,0.14000233,0.029165292,0.0025465356,0.08415016,0.72302526],"study_design_scores_gemma":[0.0000335383,0.0001065663,0.0019997377,0.00002770328,0.000024944664,0.00010431823,0.00008885914,0.9823522,0.007922293,0.0034519979,0.0038681377,0.000019732834],"about_ca_topic_score_codex":0.0076119797,"about_ca_topic_score_gemma":0.013752354,"teacher_disagreement_score":0.0076119797,"about_ca_system_score_codex":0.0009034941,"about_ca_system_score_gemma":0.00058386836,"threshold_uncertainty_score":0.024604619},"labels":[],"label_agreement":null},{"id":"W3030473750","doi":"10.1038/s41379-020-0578-0","title":"ALK rearranged renal cell carcinoma (ALK-RCC): a multi-institutional study of twelve cases with identification of novel partner genes CLIP1, KIF5B and KIAA1217","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Identification (biology); Renal cell carcinoma; Pathology; Carcinoma; Gene; Medicine; Cancer research; Biology; Genetics","score_opus":0.036102834463022614,"score_gpt":0.26321784063167697,"score_spread":0.22711500616865435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3030473750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99952495,0.00005680209,0.00011791463,0.000009421558,0.0000021868866,0.000009671345,0.000045113848,0.0000037984723,0.00023026184],"genre_scores_gemma":[0.9995852,0.000043085936,0.00009764818,0.000011415885,0.0000067534593,0.0000062975696,0.000110500136,0.0000040527843,0.00013503479],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99912137,0.000115258794,0.00009793368,0.00030848914,0.00012484787,0.00023220405],"domain_scores_gemma":[0.9984091,0.00034342278,0.0003198024,0.00023948893,0.00018154386,0.00050665636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057885813,0.0008303168,0.00059001526,0.0017279021,0.0026730937,0.0010200026,0.0010872963,0.00084083725,0.0019489615],"category_scores_gemma":[0.0018550361,0.0010639426,0.0006500011,0.0014183896,0.0013258808,0.000674223,0.0015257552,0.00065875234,0.00063525786],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038287387,0.00030328642,0.9577496,0.000017556813,0.000061859595,0.03466235,0.0013422037,0.00008547353,0.0036827046,0.00004739436,0.00011230238,0.001552286],"study_design_scores_gemma":[0.00005249749,0.0007322167,0.9091132,0.00001175999,0.00013442099,0.08330055,0.0039257677,0.00036797914,0.0016000406,0.00006805086,0.0006514582,0.000041985895],"about_ca_topic_score_codex":0.0053516054,"about_ca_topic_score_gemma":0.0054056975,"teacher_disagreement_score":0.0053516054,"about_ca_system_score_codex":0.00065640034,"about_ca_system_score_gemma":0.0004953926,"threshold_uncertainty_score":0.010640919},"labels":[],"label_agreement":null},{"id":"W3033876871","doi":"10.1038/s41379-020-0586-0","title":"Low junctional adhesion molecule-A expression is associated with an epithelial to mesenchymal transition and poorer outcomes in high-grade serous carcinoma of uterine adnexa","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Queen's University; Princess Margaret Cancer Centre; University of Toronto; University Health Network; University of Calgary; Centre Hospitalier de l’Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Terry Fox Research Institute","keywords":"Medicine; Cohort; Tissue microarray; Serous fluid; Serous carcinoma; Ovarian cancer; Oncology; Biomarker; Internal medicine; Cancer; Pathology; Cancer research; Biology","score_opus":0.0195572156738983,"score_gpt":0.25999766333946095,"score_spread":0.24044044766556266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033876871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993413,0.00031928235,0.000070393544,0.000019757661,0.0000058858345,0.0000016993641,0.000037566107,0.0000027910412,0.00020133507],"genre_scores_gemma":[0.9997086,0.000097295815,0.00005294586,0.0000067414803,0.0000063313983,0.0000016063901,0.000045584504,7.3315505e-7,0.0000800258],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99987936,0.000027382242,0.000016702137,0.000021983711,0.000027249336,0.000027295293],"domain_scores_gemma":[0.99944645,0.00011417192,0.00026137478,0.000030868585,0.000055311535,0.000091800975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001757434,0.0001332377,0.0002028198,0.000719774,0.0003281313,0.0006001301,0.00019283974,0.00027712985,0.0010507801],"category_scores_gemma":[0.0012031043,0.00013779699,0.00016872352,0.0006466025,0.00028629645,0.00023767877,0.00031359642,0.00029397118,0.000115278344],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020330079,0.000027673423,0.98995435,0.000021301279,0.000045686418,0.00046124047,0.00007147488,0.000034087232,0.006686401,0.00004595424,0.00006623617,0.0023821972],"study_design_scores_gemma":[0.0000035158052,0.000046698475,0.9972914,0.0000047904405,0.000035525783,0.0011985248,0.00022259017,0.0002398916,0.00068558415,0.000062375744,0.000206394,0.0000027845829],"about_ca_topic_score_codex":0.0008436783,"about_ca_topic_score_gemma":0.0010955794,"teacher_disagreement_score":0.0010507801,"about_ca_system_score_codex":0.00015524964,"about_ca_system_score_gemma":0.000168129,"threshold_uncertainty_score":0.003515184},"labels":[],"label_agreement":null},{"id":"W3036086978","doi":"10.1038/s41379-019-0376-8","title":"Correction: Whole exome sequencing reveals mutations in FAT1 tumor suppressor gene clinically impacting on peripheral T-cell lymphoma not otherwise specified","year":2019,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Hematopathology; Exome sequencing; Lymphoma; Pathology; Exome; Suppressor; Medicine; Gene; Biology; Mutation; Genetics; Chromosome; Cytogenetics","score_opus":0.029667424819994345,"score_gpt":0.2793389809274205,"score_spread":0.24967155610742614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036086978","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005737239,0.00083224045,0.0011676742,0.08661563,0.90336317,0.000048038415,0.0027298369,0.0006465055,0.004023255],"genre_scores_gemma":[0.051380586,0.01004858,0.015825145,0.18396018,0.39787415,0.00039984196,0.007491202,0.0027423806,0.33027795],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99771786,0.00029539783,0.0004599728,0.00039489334,0.0008662301,0.00026575473],"domain_scores_gemma":[0.98788375,0.0042920425,0.00075980637,0.00082752865,0.0053531574,0.00088373193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026290957,0.002390283,0.0017136297,0.003213164,0.0026807918,0.0025958268,0.0036232031,0.00916766,0.045202237],"category_scores_gemma":[0.04185261,0.0010857302,0.0014058736,0.0016511346,0.0021571263,0.0016811931,0.001727319,0.010025669,0.020980874],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045604338,0.000009750153,0.0001384514,0.00013383792,0.000018229204,0.0029320368,0.000040230298,0.000068050125,0.00012849309,0.0006991128,0.9899614,0.0058247787],"study_design_scores_gemma":[0.00012865897,0.00003713409,0.0017174927,0.00048291104,0.00008669735,0.009475688,0.0001332978,0.000520461,0.0007129014,0.0031256904,0.9835001,0.000079014004],"about_ca_topic_score_codex":0.015172468,"about_ca_topic_score_gemma":0.019554669,"teacher_disagreement_score":0.045202237,"about_ca_system_score_codex":0.002661195,"about_ca_system_score_gemma":0.0034971517,"threshold_uncertainty_score":0.1512165},"labels":[],"label_agreement":null},{"id":"W3036765574","doi":"10.1038/s41379-020-0602-4","title":"DICER1-associated sarcomas: towards a unified nomenclature","year":2020,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Nomenclature; Pathology; Medicine; Biology; Zoology; Taxonomy (biology)","score_opus":0.03248433185628606,"score_gpt":0.2671845063795608,"score_spread":0.23470017452327474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036765574","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012227065,0.0049542147,0.00073305605,0.96888584,0.020130197,0.000014057966,0.000026294514,0.000019477686,0.0040141195],"genre_scores_gemma":[0.02667581,0.008867222,0.0027517814,0.742441,0.21169758,0.00007761119,0.00006563562,0.000050794988,0.0073725954],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964611,0.0012637024,0.0007826568,0.0004335022,0.00065965357,0.000399431],"domain_scores_gemma":[0.9894951,0.0061980267,0.00088170014,0.00046327713,0.0016384526,0.0013234006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0047521293,0.0005471548,0.0012773289,0.001202138,0.002617153,0.0036509254,0.0016264445,0.039374445,0.0014819383],"category_scores_gemma":[0.019747952,0.0006394473,0.0007404333,0.00084352324,0.006443488,0.00461689,0.002743888,0.033204,0.0014961625],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088178705,0.000050534836,0.0028424328,0.00019267955,0.000017602959,0.041917797,0.00091512135,0.00028863866,0.0010016367,0.039374564,0.8844107,0.028900186],"study_design_scores_gemma":[0.000107298016,0.0000848365,0.002143838,0.0008932778,0.00002477955,0.06534457,0.00086082256,0.00109682,0.00044514224,0.05429356,0.8746043,0.00010084398],"about_ca_topic_score_codex":0.0021063045,"about_ca_topic_score_gemma":0.0045846426,"teacher_disagreement_score":0.039374445,"about_ca_system_score_codex":0.004479955,"about_ca_system_score_gemma":0.0033150902,"threshold_uncertainty_score":0.03250456},"labels":[],"label_agreement":null},{"id":"W3041227174","doi":"10.1038/s41379-020-0512-5","title":"Correction: PD-L1 in small bowel adenocarcinoma is associated with etiology and tumor-infiltrating lymphocytes, in addition to microsatellite instability","year":2020,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Gastrointestinal Tumor Research and Treatment","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"","keywords":"Microsatellite instability; Etiology; Pathology; Adenocarcinoma; Medicine; Biology; Microsatellite; Internal medicine; Cancer; Gene; Genetics","score_opus":0.025733472766459372,"score_gpt":0.2592050803484142,"score_spread":0.23347160758195484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3041227174","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003374549,0.0010318042,0.0005259735,0.04075572,0.9548476,0.000019187202,0.00080594653,0.00023677119,0.0014395755],"genre_scores_gemma":[0.03576258,0.01015311,0.007403651,0.08884627,0.66019315,0.00022266507,0.0030229196,0.0018163397,0.19257933],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979291,0.00032421853,0.0004035065,0.00034882533,0.00076799816,0.00022632655],"domain_scores_gemma":[0.9873469,0.0036819004,0.001037703,0.00080766587,0.0060846303,0.0010412445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024478247,0.0017965588,0.0016381011,0.0028169388,0.0019232121,0.0024492224,0.0027287225,0.007169557,0.03813762],"category_scores_gemma":[0.03749073,0.0010121737,0.0014148604,0.001408535,0.0017291171,0.0014731305,0.0012745247,0.008802426,0.018027157],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007628645,0.000009256891,0.00020961584,0.0002572287,0.00002550351,0.0021551757,0.000030030853,0.00006740851,0.00012245537,0.0004845978,0.9891257,0.0074366215],"study_design_scores_gemma":[0.00013002295,0.000045133533,0.0020066532,0.00050399336,0.00011644927,0.0076322844,0.000106508945,0.0005859467,0.00089716516,0.00136569,0.98654455,0.00006554039],"about_ca_topic_score_codex":0.007217571,"about_ca_topic_score_gemma":0.008094726,"teacher_disagreement_score":0.03813762,"about_ca_system_score_codex":0.002487089,"about_ca_system_score_gemma":0.0028020819,"threshold_uncertainty_score":0.12758303},"labels":[],"label_agreement":null},{"id":"W3042991127","doi":"10.1038/s41379-020-0623-z","title":"Mesenchymal tumors of the gastrointestinal tract with NTRK rearrangements: a clinicopathological, immunophenotypic, and molecular study of eight cases, emphasizing their distinction from gastrointestinal stromal tumor (GIST)","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gastrointestinal Tumor Research and Treatment","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System","funders":"","keywords":"GiST; Gastrointestinal tract; Pathology; CD34; Immunohistochemistry; S100 protein; Biology; Stromal tumor; Aggressive angiomyxoma; CD117; Mesenchymal stem cell; Hematopathology; Stromal cell; Medicine; Internal medicine; Cytogenetics; Soft tissue; Chromosome; Gene","score_opus":0.03667532307128281,"score_gpt":0.27581371545844807,"score_spread":0.23913839238716528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042991127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834394,0.00021289835,0.0005952568,0.000030191175,0.0000072894427,0.000026696012,0.00005257581,0.00001136765,0.00071989215],"genre_scores_gemma":[0.9987413,0.00013415686,0.00075035106,0.000016187247,0.000014427431,0.000023598888,0.000068306625,0.0000041379576,0.00024749653],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9996809,0.000034390283,0.000063692765,0.00006595612,0.0000551288,0.000100026235],"domain_scores_gemma":[0.99906856,0.00031566338,0.00020991128,0.0001034713,0.00006779843,0.0002346066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035099915,0.0009051498,0.0003509951,0.0012399837,0.0008585267,0.00056555244,0.0005842761,0.00074076647,0.0013117297],"category_scores_gemma":[0.0017402745,0.00064258015,0.00041356008,0.0008195337,0.0014128529,0.00043901897,0.0011814951,0.0004894646,0.000400722],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009882511,0.0003408104,0.3784342,0.0001376745,0.00008679223,0.571689,0.0023562254,0.00070765876,0.03181749,0.00033542808,0.00033527712,0.012771106],"study_design_scores_gemma":[0.00009068023,0.00091949565,0.33620855,0.00003133777,0.00010640306,0.64978915,0.0014740971,0.0011247243,0.00809424,0.00031165997,0.0017989661,0.000050633087],"about_ca_topic_score_codex":0.0009597971,"about_ca_topic_score_gemma":0.0014545401,"teacher_disagreement_score":0.0013117297,"about_ca_system_score_codex":0.0003610434,"about_ca_system_score_gemma":0.0002624354,"threshold_uncertainty_score":0.0043881536},"labels":[],"label_agreement":null},{"id":"W3045983904","doi":"10.1038/s41379-020-0618-9","title":"Refined cut-off for TP53 immunohistochemistry improves prediction of TP53 mutation status in ovarian mucinous tumors: implications for outcome analyses","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; Centre Hospitalier de l’Université de Montréal; University of Calgary","funders":"Medical Research and Materiel Command; National Cancer Institute; Cancer Council Tasmania; Cancer Council Victoria; Terry Fox Research Institute; Cancer Institute NSW; Canadian Institutes of Health Research; National Institutes of Health; BC Cancer Foundation; Cancer Council South Australia; Université de Montréal; Cancer Australia; National Institute for Health and Care Research; National Health and Medical Research Council; University of Cambridge; Minnesota Ovarian Cancer Alliance; Huntsman Cancer Foundation; Cancer Research UK; Michael Smith Health Research BC; Mayo Foundation for Medical Education and Research; Cancer Council NSW; Ovarian Cancer Australia; Marshfield Clinic Research Foundation; Victorian Cancer Agency; Fred C. and Katherine B. Andersen Foundation; Medical Research Council; Peter MacCallum Foundation; Cancer Research Society; Swedish Cancer Foundation","keywords":"Tissue microarray; Immunohistochemistry; Concordance; Pathology; Medicine; Ovarian cancer; Oncology; Cohort; Anatomical pathology; Internal medicine; Biology; Cancer","score_opus":0.08798721174970824,"score_gpt":0.37658822729790226,"score_spread":0.288601015548194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045983904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.972801,0.0035141471,0.01872952,0.0007238159,0.00016334723,0.00008794442,0.0010191064,0.0003480959,0.0026129798],"genre_scores_gemma":[0.9898864,0.0002933683,0.0077129146,0.0002031661,0.00007933384,0.000035396402,0.0013348645,0.000070681795,0.00038383427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977889,0.0007981362,0.00023866254,0.000377659,0.000524711,0.00027195283],"domain_scores_gemma":[0.99181247,0.0041568982,0.0010585951,0.000991792,0.0014343829,0.0005459079],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006875424,0.00088245416,0.0014422052,0.0020191984,0.0005859372,0.002239101,0.0011308942,0.0012609509,0.0014886509],"category_scores_gemma":[0.015271121,0.00028320754,0.0010952323,0.00095197995,0.00042559925,0.0009775702,0.0010031869,0.0014157722,0.0006788824],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029691989,0.0002984139,0.89121014,0.0001537915,0.00060628634,0.00042349045,0.00012908064,0.004853893,0.0146093145,0.00054791744,0.002335056,0.08186349],"study_design_scores_gemma":[0.00024886263,0.0014059487,0.913089,0.00017725756,0.0011859536,0.0018492325,0.0003452311,0.06044236,0.012126088,0.005473538,0.0035677229,0.00008870645],"about_ca_topic_score_codex":0.0018231032,"about_ca_topic_score_gemma":0.0032243396,"teacher_disagreement_score":0.006875424,"about_ca_system_score_codex":0.0007109694,"about_ca_system_score_gemma":0.00074009533,"threshold_uncertainty_score":0.036361158},"labels":[],"label_agreement":null},{"id":"W3047561574","doi":"10.1038/s41379-020-0640-y","title":"Artificial intelligence assistance significantly improves Gleason grading of prostate biopsies by pathologists","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":159,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"National Cancer Institute; KWF Kankerbestrijding; Barts Charity","keywords":"Grading (engineering); Prostate cancer; Prostate; Biopsy; Anatomical pathology; Prostate biopsy; Applications of artificial intelligence; Needle biopsy","score_opus":0.03552973169698858,"score_gpt":0.2573289568775067,"score_spread":0.2217992251805181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047561574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9677661,0.0009427534,0.025710978,0.00040300822,0.00010978342,0.00008035328,0.0001782253,0.0012668712,0.00354182],"genre_scores_gemma":[0.9845011,0.00015327912,0.013855846,0.00009443937,0.000046821737,0.000020291964,0.00032148437,0.00005408534,0.0009527738],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9953264,0.002159821,0.00022775118,0.00087127456,0.0011784241,0.00023632988],"domain_scores_gemma":[0.98666996,0.0077118548,0.0013299352,0.0012213544,0.0023124511,0.000754426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0048644803,0.00077507447,0.0005530495,0.001224694,0.0004078407,0.0010315925,0.00055237045,0.0008798531,0.0014729819],"category_scores_gemma":[0.022240205,0.00032351853,0.00052906224,0.000542506,0.00039297892,0.00086224946,0.001536798,0.0006359039,0.0006312106],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059446716,0.0009552381,0.1939365,0.0006831068,0.0009368337,0.0005169465,0.0018900426,0.03509888,0.10954425,0.00041306444,0.0061454084,0.6439351],"study_design_scores_gemma":[0.00019070297,0.0037329497,0.6446802,0.00017973996,0.0007372427,0.0009636594,0.00082541164,0.25540262,0.08220103,0.0027047151,0.00809412,0.00028759692],"about_ca_topic_score_codex":0.0028409667,"about_ca_topic_score_gemma":0.0038407901,"teacher_disagreement_score":0.0048644803,"about_ca_system_score_codex":0.0004410843,"about_ca_system_score_gemma":0.0005778309,"threshold_uncertainty_score":0.02572614},"labels":[],"label_agreement":null},{"id":"W3048135691","doi":"10.1038/s41379-020-0646-5","title":"EWSR1/FUS–CREB fusions define a distinctive malignant epithelioid neoplasm with predilection for mesothelial-lined cavities","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Centre hospitalier universitaire de Québec","funders":"National Cancer Institute","keywords":"Biology; Pathology; Fusion gene; Immunophenotyping; Epithelioid cell; Phenotype; Gene; Immunohistochemistry; Genetics; Medicine; Immunology","score_opus":0.020792878332697284,"score_gpt":0.238275379265205,"score_spread":0.21748250093250773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048135691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536335,0.00021411553,0.001511284,0.000045373818,0.000009308181,0.00004011843,0.00015330804,0.00006793395,0.0025951825],"genre_scores_gemma":[0.9988066,0.000038899998,0.000780578,0.000011473534,0.0000060159837,0.000006982011,0.00007241608,0.000009689866,0.0002673235],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99978393,0.00001622703,0.000019791216,0.000055930985,0.000055355762,0.00006883134],"domain_scores_gemma":[0.99956065,0.00007761618,0.00014629333,0.000068574474,0.000036846333,0.000110003784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024136069,0.00039165645,0.00028377917,0.0006967487,0.00035827403,0.0006220677,0.0003253654,0.000698433,0.0016596634],"category_scores_gemma":[0.0006020815,0.00024064747,0.0001918311,0.00046714433,0.0007913705,0.00046232695,0.00085254107,0.0003015527,0.0006076012],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009418038,0.000073121984,0.07621378,0.00013045265,0.000039164133,0.11401032,0.0004894729,0.00067151693,0.796492,0.0025511861,0.0005039036,0.007883409],"study_design_scores_gemma":[0.00011524657,0.00051313324,0.3904756,0.00003356785,0.00013173828,0.4419908,0.0014412357,0.0056911833,0.1481034,0.003278228,0.008169114,0.000056752622],"about_ca_topic_score_codex":0.00048097462,"about_ca_topic_score_gemma":0.0007877046,"teacher_disagreement_score":0.0016596634,"about_ca_system_score_codex":0.0002783885,"about_ca_system_score_gemma":0.00016527649,"threshold_uncertainty_score":0.005552113},"labels":[],"label_agreement":null},{"id":"W3048930560","doi":"10.1038/s41379-020-00651-3","title":"Molecular characterization of invasive and in situ squamous neoplasia of the vulva and implications for morphologic diagnosis and outcome","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"HRAS; Vulvar intraepithelial neoplasia; Vulva; Pathology; Lichen sclerosus; Atypia; Medicine; Immunohistochemistry; Intraepithelial neoplasia; Cancer research; Internal medicine; KRAS; Cancer","score_opus":0.05476396862380608,"score_gpt":0.3257044597773987,"score_spread":0.27094049115359264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048930560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9784571,0.011588085,0.003156575,0.00080848933,0.00006703379,0.000035704266,0.00066829496,0.00005552719,0.0051631224],"genre_scores_gemma":[0.99292916,0.003390607,0.0017572397,0.00011255888,0.000049685073,0.000019534522,0.0005492191,0.000014133666,0.001177901],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99958104,0.00008951319,0.000042800228,0.00008802798,0.000120980316,0.000077727695],"domain_scores_gemma":[0.9993088,0.00020080869,0.00018970095,0.00007373121,0.00014995963,0.000077025674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007816368,0.00028060825,0.00032918126,0.0025590726,0.00039428176,0.0017931481,0.00058358966,0.0005722525,0.0015301352],"category_scores_gemma":[0.0014301968,0.00020549694,0.00025333045,0.00097431714,0.00063428655,0.0006349942,0.00038658068,0.00054029963,0.0002806377],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011150757,0.00022784037,0.41376498,0.00046851998,0.00017685848,0.0013740815,0.00058454793,0.0010241867,0.48784187,0.003929252,0.00082697073,0.08866585],"study_design_scores_gemma":[0.000028850984,0.0005784357,0.816082,0.00012961944,0.0002873904,0.010915999,0.002500276,0.0032158678,0.14296494,0.0034352648,0.019825004,0.00003626871],"about_ca_topic_score_codex":0.0011061834,"about_ca_topic_score_gemma":0.0009846513,"teacher_disagreement_score":0.0025590726,"about_ca_system_score_codex":0.0005770422,"about_ca_system_score_gemma":0.00039620526,"threshold_uncertainty_score":0.005118847},"labels":[],"label_agreement":null},{"id":"W3082666061","doi":"10.1038/s41379-020-00674-w","title":"High throughput assessment of biomarkers in tissue microarrays using artificial intelligence: PTEN loss as a proof-of-principle in multi-center prostate cancer cohorts","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; Queen's University","funders":"National Cancer Institute; National Institutes of Health; Ontario Institute for Cancer Research; Movember Foundation; U.S. Department of Health and Human Services","keywords":"PTEN; Tissue microarray; Prostate cancer; Tensin; Cohort; Biomarker; Medicine; Cancer; Artificial intelligence; Pathology; Internal medicine; Oncology; Computer science; Biology","score_opus":0.06443303697614562,"score_gpt":0.3652866337155228,"score_spread":0.30085359673937717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082666061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7683261,0.0029295313,0.21376304,0.0024161732,0.00034651317,0.00046074615,0.005346217,0.0021102868,0.0043015457],"genre_scores_gemma":[0.9098629,0.00067430246,0.08468044,0.00067369477,0.00012239991,0.00034339988,0.002451851,0.000096443655,0.0010947103],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975987,0.0010934477,0.000085272666,0.0005223743,0.0005444395,0.00015580596],"domain_scores_gemma":[0.9962315,0.002237645,0.00038794396,0.00052676763,0.00043191502,0.00018421529],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00438066,0.00092755764,0.00095463125,0.00092244556,0.0005251066,0.0027165415,0.0011849802,0.0012226665,0.0013096131],"category_scores_gemma":[0.008896664,0.00074026117,0.0010109844,0.0006454453,0.0005784081,0.0006601215,0.0015929776,0.0015973785,0.0006246426],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005031499,0.0016365759,0.3413428,0.0010189248,0.0030133952,0.0010961652,0.00082686567,0.056330845,0.3665042,0.0071057403,0.010003583,0.20608945],"study_design_scores_gemma":[0.00046370763,0.0027378483,0.1684306,0.0001648331,0.0018531067,0.0022748918,0.0006918923,0.5541982,0.23546723,0.019213824,0.014263177,0.0002407492],"about_ca_topic_score_codex":0.0010850194,"about_ca_topic_score_gemma":0.0016009925,"teacher_disagreement_score":0.00438066,"about_ca_system_score_codex":0.00036849003,"about_ca_system_score_gemma":0.00077710004,"threshold_uncertainty_score":0.023167431},"labels":[],"label_agreement":null},{"id":"W3084266016","doi":"10.1038/s41379-020-00670-0","title":"Pseudosarcomatous myofibroblastic proliferations of the urinary bladder are neoplasms characterized by recurrent FN1–ALK fusions","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"IgG4-Related and Inflammatory Diseases","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Immunohistochemistry; Pathology; Medicine; Fluorescence in situ hybridization; ROS1; Gene rearrangement; Anatomical pathology; Biology; Internal medicine; Cancer; Adenocarcinoma; Gene","score_opus":0.01454995942546259,"score_gpt":0.2260314605280489,"score_spread":0.21148150110258632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3084266016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887998,0.00292776,0.0019776644,0.00009811431,0.00004653685,0.000034464163,0.00024663698,0.00017125887,0.0056977267],"genre_scores_gemma":[0.997717,0.00061670446,0.00080078025,0.000025983647,0.000066529996,0.0000072869843,0.00012534633,0.000012159119,0.0006282579],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9997403,0.000032157703,0.000028553193,0.00004766635,0.000060210423,0.00009104812],"domain_scores_gemma":[0.9994142,0.00010478725,0.00027360333,0.00007135967,0.000039272327,0.00009682681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002697123,0.0006482531,0.00023220613,0.0013582186,0.00038265486,0.00050658523,0.0003608868,0.0005845148,0.0016790935],"category_scores_gemma":[0.0009101463,0.0003243579,0.00027969637,0.0008972107,0.00058247795,0.0005043196,0.00048484097,0.00028271734,0.0007355126],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010881199,0.00008970075,0.13437727,0.000851417,0.00011032476,0.5449184,0.001391533,0.000576093,0.2729316,0.0023571202,0.0010615634,0.040246867],"study_design_scores_gemma":[0.000026887603,0.00020726988,0.17021479,0.00004730131,0.000110663976,0.7769554,0.0005378969,0.0011815255,0.041751593,0.001007692,0.007920464,0.00003847286],"about_ca_topic_score_codex":0.00057949487,"about_ca_topic_score_gemma":0.0007436409,"teacher_disagreement_score":0.0016790935,"about_ca_system_score_codex":0.00025877997,"about_ca_system_score_gemma":0.00024781862,"threshold_uncertainty_score":0.0056171417},"labels":[],"label_agreement":null},{"id":"W3089143261","doi":"10.1038/s41379-020-00680-y","title":"Interpretation of mismatch repair protein expression using obsolete criteria results in discrepancies with microsatellite instability and mutational testing results. Comment on Hechtman et al. Mod Pathol 2020; 33:871–879","year":2020,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University Health Network","funders":"","keywords":"Microsatellite instability; Protein expression; Interpretation (philosophy); Computational biology; Expression (computer science); Pathology; Instability; Microsatellite; Biology; Medicine; Genetics; Computer science; Physics; Gene; Programming language; Mechanics","score_opus":0.045640297220606925,"score_gpt":0.30697520275563533,"score_spread":0.2613349055350284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3089143261","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014699823,0.0014585218,0.00033429463,0.96425825,0.028362138,0.000020466587,0.00011569022,0.00007867966,0.0039019638],"genre_scores_gemma":[0.010746407,0.0014378699,0.0006680552,0.92441094,0.05783964,0.00003762463,0.00006712601,0.00004806925,0.0047443416],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967884,0.0009951976,0.00061694393,0.00042532242,0.0008172863,0.00035689224],"domain_scores_gemma":[0.99212986,0.004104089,0.00050760066,0.00026911634,0.002198437,0.0007909166],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0033312265,0.0010715638,0.0011562217,0.0012454042,0.002216669,0.0022320016,0.001909625,0.03372858,0.004293464],"category_scores_gemma":[0.027297303,0.0007685196,0.0012362772,0.0009458561,0.003320917,0.0029773957,0.0011175921,0.021139326,0.007956856],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012149839,0.000041968382,0.0037103626,0.000084607724,0.000022334925,0.018253934,0.00022182649,0.00013750448,0.00052029354,0.0019634594,0.9632228,0.011699439],"study_design_scores_gemma":[0.00026738763,0.00020879031,0.0076517845,0.00092378276,0.000102413236,0.07529786,0.0010088981,0.0021190392,0.0018229897,0.016600503,0.8937483,0.00024827826],"about_ca_topic_score_codex":0.0077020368,"about_ca_topic_score_gemma":0.010902446,"teacher_disagreement_score":0.99666876,"about_ca_system_score_codex":0.0033425258,"about_ca_system_score_gemma":0.0019717473,"threshold_uncertainty_score":0.024251819},"labels":[],"label_agreement":null},{"id":"W3091221082","doi":"10.1038/s41379-020-00687-5","title":"RNA expression profiling reveals PRAME, a potential immunotherapy target, is frequently expressed in solitary fibrous tumors","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Soft tissue tumor case studies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto; Sinai Health System; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Immunotherapy; Cancer research; Biology; CD163; Metastasis; Tissue microarray; Cancer immunotherapy; Immunohistochemistry; Solitary fibrous tumor; Cancer; Pathology; Immunology; Medicine; Immune system; Macrophage","score_opus":0.02319594976126591,"score_gpt":0.2763258284847509,"score_spread":0.25312987872348497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3091221082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99188435,0.0010466822,0.0035650188,0.00014897174,0.00003242676,0.000014582067,0.00022036362,0.0000578091,0.0030297749],"genre_scores_gemma":[0.99676466,0.00022488068,0.0016638578,0.000041925723,0.000026560658,0.000007571938,0.00014070769,0.000010107203,0.001119645],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998097,0.000021787951,0.000015057139,0.000048688733,0.000066424946,0.00003846031],"domain_scores_gemma":[0.99971277,0.00011114333,0.00008011785,0.00003034612,0.000037838425,0.000027741271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016314907,0.00016253325,0.0001475855,0.0006183526,0.00028841803,0.00040201223,0.00013790806,0.0003970378,0.0014229687],"category_scores_gemma":[0.0004935189,0.000114429684,0.00017901004,0.00029708113,0.00038310728,0.00022121888,0.00018286216,0.00021766809,0.0003788605],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002521479,0.000030602027,0.026564186,0.000079184785,0.000028956014,0.015942525,0.00020229531,0.00014358394,0.94662136,0.00030449295,0.00018701782,0.009643679],"study_design_scores_gemma":[0.000023373705,0.0006653905,0.28542608,0.000039895876,0.00026370696,0.14404738,0.0012988903,0.005101488,0.54726523,0.0012009525,0.014635431,0.000032177395],"about_ca_topic_score_codex":0.00019791076,"about_ca_topic_score_gemma":0.00039760995,"teacher_disagreement_score":0.0014229687,"about_ca_system_score_codex":0.000098738805,"about_ca_system_score_gemma":0.00010150306,"threshold_uncertainty_score":0.004760325},"labels":[],"label_agreement":null},{"id":"W3093000805","doi":"10.1038/s41379-020-00688-4","title":"Malignant peritoneal mesothelioma: prognostic significance of clinical and pathologic parameters and validation of a nuclear-grading system in a multi-institutional series of 225 cases","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Medicine; Peritoneal mesothelioma; Pathology; Mesothelioma; Grading (engineering); Univariate analysis; Peritoneum; Mitotic index; Oncology; Internal medicine; Multivariate analysis","score_opus":0.07478505397466714,"score_gpt":0.3072121009944199,"score_spread":0.23242704701975278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093000805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995322,0.00012583548,0.00012464277,0.0000042113143,0.0000024501396,0.000006036043,0.000055479373,0.0000035487485,0.00014544174],"genre_scores_gemma":[0.9997334,0.000041288025,0.0000784853,0.0000023942703,0.0000038550993,0.000004273926,0.00011144951,0.0000014242297,0.000023536833],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994216,0.0001382039,0.00009973638,0.00015711533,0.00010118206,0.00008226318],"domain_scores_gemma":[0.998546,0.0004149034,0.0003775829,0.00032015628,0.00014785682,0.00019350763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009661231,0.00039751976,0.0003128221,0.0016920947,0.00071406236,0.0007727794,0.0005257261,0.00034961087,0.0006573006],"category_scores_gemma":[0.0034883076,0.000399125,0.00036364276,0.0010916085,0.00073715596,0.00039308664,0.0006767958,0.0002034514,0.00022628049],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015036287,0.000031890417,0.9950767,0.0000115752955,0.000039802548,0.0013690232,0.00019596114,0.00009926851,0.0011119762,0.000022933316,0.00005223795,0.0018383926],"study_design_scores_gemma":[0.000018781862,0.00015747457,0.9896485,0.000006833146,0.00007916741,0.0077252453,0.00051580055,0.0006114658,0.0009218754,0.000029992216,0.00027425133,0.00001060005],"about_ca_topic_score_codex":0.0014496276,"about_ca_topic_score_gemma":0.0016826438,"teacher_disagreement_score":0.0016920947,"about_ca_system_score_codex":0.00031566314,"about_ca_system_score_gemma":0.00028789026,"threshold_uncertainty_score":0.0051093698},"labels":[],"label_agreement":null},{"id":"W3093143558","doi":"10.1038/s41379-020-00705-6","title":"Targeted RNA expression profiling identifies high-grade endometrial stromal sarcoma as a clinically relevant molecular subtype of uterine sarcoma","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Calgary; Lions Gate Hospital; Spinal Cord Injury BC; University of British Columbia","funders":"","keywords":"Endometrial stromal sarcoma; Biology; Sarcoma; Cancer research; Pathology; Trk receptor; Fluorescence in situ hybridization; Immunohistochemistry; PDGFRA; CDKN2A; Stromal cell; Medicine; Cancer; Gene; GiST; Genetics; Receptor","score_opus":0.031037141226194383,"score_gpt":0.31447421412362486,"score_spread":0.2834370728974305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093143558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924837,0.0012371504,0.003021404,0.00016265515,0.000023498176,0.00002789815,0.00041879684,0.000044751716,0.0025802052],"genre_scores_gemma":[0.9958994,0.00052015984,0.0018260869,0.00011179153,0.000017757488,0.000014930333,0.00048295208,0.000009164942,0.0011177548],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998412,0.000025463734,0.000010439558,0.00003765328,0.0000519927,0.000033228618],"domain_scores_gemma":[0.99989116,0.000035667686,0.000026826398,0.000010873559,0.000020752144,0.000014721383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015819875,0.00014012506,0.00016173784,0.00043476268,0.00016917863,0.00043498096,0.00012462662,0.00028819096,0.0010989233],"category_scores_gemma":[0.0003050158,0.00012606772,0.00012058557,0.0002567079,0.00018751096,0.00011587558,0.0001637797,0.00021174338,0.00033165343],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019395501,0.000023992001,0.016375322,0.00004387563,0.00001802001,0.00035024382,0.000055615266,0.000111032714,0.97575,0.00016393898,0.00013744998,0.0067765354],"study_design_scores_gemma":[0.00004109372,0.000739564,0.4204576,0.00004102649,0.00023117656,0.007900073,0.00080125703,0.0054270164,0.5540725,0.0006395042,0.009627558,0.000021608],"about_ca_topic_score_codex":0.00041639782,"about_ca_topic_score_gemma":0.0014571394,"teacher_disagreement_score":0.0010989233,"about_ca_system_score_codex":0.00015825202,"about_ca_system_score_gemma":0.00017674666,"threshold_uncertainty_score":0.0036762953},"labels":[],"label_agreement":null},{"id":"W3097915043","doi":"10.1038/s41379-020-0487-2","title":"Correction: Comprehensive analysis of 204 sporadic hydatidiform moles: revisiting risk factors and their correlations with the molar genotypes","year":2020,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Gestational Trophoblastic Disease Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Ottawa Fertility Centre; Centre Hospitalier de l’Université de Montréal; McGill University; McGill University Health Centre","funders":"","keywords":"Genotype; Molar pregnancy; Molar; Mole; Partial Hydatidiform Mole; Medicine; Gynecology; Pathology; Biology; Pregnancy; Genetics; Internal medicine; Gene; Fetus; Gestation; Orthodontics; Placenta","score_opus":0.01638304887697884,"score_gpt":0.24165587786682904,"score_spread":0.2252728289898502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097915043","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011438514,0.0022588745,0.0015944998,0.06397801,0.9205365,0.000063965526,0.0071523692,0.0005157931,0.0027560366],"genre_scores_gemma":[0.083001554,0.016929582,0.02525943,0.13888577,0.49479464,0.00073957926,0.020093994,0.004228146,0.21606736],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9971205,0.00059232535,0.00062008837,0.000393872,0.000983025,0.0002902252],"domain_scores_gemma":[0.97099215,0.008802208,0.0017430341,0.0026468039,0.014260236,0.001555593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0048866183,0.0016009299,0.0015733668,0.003856631,0.0015575695,0.0019540659,0.0028492727,0.0034822095,0.033640414],"category_scores_gemma":[0.08534312,0.000904898,0.0012337703,0.0025827398,0.001238477,0.0011734734,0.0016560496,0.0049439045,0.013262532],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007079314,0.0000062423956,0.0007221048,0.00027263205,0.000039434046,0.00082887174,0.000043661123,0.00005324325,0.000067198795,0.000384493,0.988749,0.008762486],"study_design_scores_gemma":[0.00012894635,0.000037928996,0.0064180857,0.0011349482,0.0002268072,0.0040157153,0.00017270006,0.000476338,0.00060901465,0.0015366072,0.9851649,0.00007786607],"about_ca_topic_score_codex":0.016953332,"about_ca_topic_score_gemma":0.018371277,"teacher_disagreement_score":0.033640414,"about_ca_system_score_codex":0.0018458256,"about_ca_system_score_gemma":0.0046511767,"threshold_uncertainty_score":0.1125384},"labels":[],"label_agreement":null},{"id":"W3107686376","doi":"10.1038/s41379-020-00710-9","title":"Comparing programmed death ligand 1 scores for predicting pembrolizumab efficacy in head and neck cancer","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"Rosetrees Trust; National Institute for Health and Care Research; Cancer Research UK; Merck","keywords":"Pembrolizumab; Head and neck squamous-cell carcinoma; Medicine; Oncology; Internal medicine; Receiver operating characteristic; Head and neck cancer; Clinical trial; Immunotherapy; Cancer","score_opus":0.06803595048684008,"score_gpt":0.32906841315846747,"score_spread":0.2610324626716274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107686376","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791366,0.0009832778,0.00019716242,0.000075973454,0.000039423117,0.0000201881,0.00015181692,0.0000058534565,0.0006126337],"genre_scores_gemma":[0.999113,0.00017357632,0.00019973596,0.000041047875,0.000025694186,0.000018654911,0.00022188494,0.0000016370757,0.00020479437],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99945444,0.00020183774,0.00005189003,0.00010571089,0.00009333314,0.00009272435],"domain_scores_gemma":[0.99874437,0.00078412174,0.00017956815,0.000060931772,0.00010743221,0.00012364134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001587791,0.0003312483,0.00054822885,0.0004919591,0.00020514769,0.00073650293,0.00031674295,0.00042536523,0.0012953825],"category_scores_gemma":[0.0030657272,0.00014625322,0.0006079522,0.00022787311,0.00024038625,0.0006335827,0.0003518045,0.0006789377,0.00022971952],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.06251687,0.0008522893,0.7886724,0.0002768797,0.002475904,0.00011363878,0.00018240848,0.0026820672,0.008032003,0.00029538,0.0012950386,0.13260517],"study_design_scores_gemma":[0.0020044078,0.016195482,0.95245075,0.00008361789,0.0023818556,0.0005666782,0.0004697031,0.01662506,0.0054604937,0.00087846426,0.0028290872,0.000054407254],"about_ca_topic_score_codex":0.00067010877,"about_ca_topic_score_gemma":0.0012747172,"teacher_disagreement_score":0.001587791,"about_ca_system_score_codex":0.00060776423,"about_ca_system_score_gemma":0.00027009493,"threshold_uncertainty_score":0.008397162},"labels":[],"label_agreement":null},{"id":"W3126873602","doi":"10.1038/s41379-021-00744-7","title":"Recurrent MEIS1-NCOA2/1 fusions in a subset of low-grade spindle cell sarcomas frequently involving the genitourinary and gynecologic tracts","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"National Taiwan University; Taipei Medical University; National Cancer Institute; National Taiwan University Hospital; Cycle for Survival","keywords":"Fluorescence in situ hybridization; Biology; Pathology; Stroma; Fusion gene; Genitourinary system; TFE3; Sarcoma; Gene rearrangement; Vulva; Medicine; Immunohistochemistry; Anatomy; Gene","score_opus":0.02967458668958316,"score_gpt":0.2735747704709212,"score_spread":0.24390018378133804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3126873602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979772,0.00020991989,0.00028486195,0.000040423714,0.0000037139328,0.000008430069,0.00008923866,0.000022288825,0.0013638751],"genre_scores_gemma":[0.9996549,0.000034055873,0.00010169155,0.00000808298,0.000004444721,0.0000016642767,0.000067657114,0.0000041595035,0.00012347643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99978834,0.000018446413,0.000021209513,0.000046446556,0.000054414697,0.00007105168],"domain_scores_gemma":[0.9994394,0.000094624105,0.00020148489,0.00007149444,0.00004898796,0.00014401315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019500195,0.00026214382,0.00023544295,0.0007180223,0.0003771116,0.0006757704,0.0002953812,0.00045585178,0.0013498887],"category_scores_gemma":[0.0009854814,0.00015707086,0.00014246446,0.00050300464,0.00042033652,0.0002865638,0.0003422895,0.00020518171,0.00035157215],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00085635594,0.000079467165,0.61991054,0.000095716925,0.00005932468,0.15611702,0.0009927116,0.0011275173,0.19769566,0.00069300196,0.00073704944,0.021635586],"study_design_scores_gemma":[0.000025426465,0.0002851805,0.5407486,0.000013483188,0.00010598211,0.42858982,0.0012382171,0.0026166101,0.022193275,0.00062835123,0.003534717,0.000020298965],"about_ca_topic_score_codex":0.00086604495,"about_ca_topic_score_gemma":0.0018488404,"teacher_disagreement_score":0.0013498887,"about_ca_system_score_codex":0.00031356353,"about_ca_system_score_gemma":0.00017354645,"threshold_uncertainty_score":0.0045158267},"labels":[],"label_agreement":null},{"id":"W3127487470","doi":"10.1038/s41379-021-00737-6","title":"Novel, emerging and provisional renal entities: The Genitourinary Pathology Society (GUPS) update on renal neoplasia","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":220,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of British Columbia; Royal Columbian Hospital; University of Calgary","funders":"","keywords":"Renal cell carcinoma; Medicine; Pathology; Genitourinary system; Renal pathology; Hematopathology; Kidney; Internal medicine; Biology; Cytogenetics","score_opus":0.020441957472022782,"score_gpt":0.2586204142307641,"score_spread":0.2381784567587413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127487470","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0026246223,0.9342206,0.004547533,0.036175054,0.016933938,0.00004723701,0.00034433618,0.00029200863,0.0048146658],"genre_scores_gemma":[0.016145896,0.9150528,0.010529961,0.020089334,0.033501357,0.00006235702,0.0013584567,0.000086734224,0.0031731084],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99845445,0.00034576363,0.0004227937,0.00020467148,0.00042277234,0.00014953564],"domain_scores_gemma":[0.99269366,0.0026263017,0.0008304542,0.0002030277,0.0030613744,0.0005850402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033298908,0.00109387,0.0015337565,0.007525763,0.0010032878,0.0031621603,0.0014329999,0.0027265393,0.002158578],"category_scores_gemma":[0.009547956,0.00046984028,0.0011665346,0.0035940157,0.0018226209,0.005730154,0.0023768116,0.0049551353,0.0012985083],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012659338,0.000041565476,0.0067929113,0.005391067,0.00015270528,0.003008951,0.0006237215,0.00070588326,0.0012120799,0.0072984756,0.31835824,0.6562878],"study_design_scores_gemma":[0.000018864674,0.00006283495,0.0038621866,0.0050292895,0.0002580317,0.021098472,0.00051228347,0.00047072448,0.00038187997,0.0056543667,0.96257716,0.000073877694],"about_ca_topic_score_codex":0.0032649918,"about_ca_topic_score_gemma":0.0076690414,"teacher_disagreement_score":0.007525763,"about_ca_system_score_codex":0.0018252487,"about_ca_system_score_gemma":0.0033563855,"threshold_uncertainty_score":0.017610371},"labels":[],"label_agreement":null},{"id":"W3134638716","doi":"10.1038/s41379-021-00783-0","title":"Hybrid schwannoma–perineurioma frequently harbors VGLL3 rearrangement","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neurofibromatosis and Schwannoma Cases","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; University of Toronto; Mount Sinai Hospital","funders":"National Institutes of Health; National Cancer Institute; Cycle for Survival; U.S. Department of Health and Human Services","keywords":"Schwannoma; Pathology; Medicine; Anatomy","score_opus":0.0234720053030216,"score_gpt":0.2625737721106121,"score_spread":0.23910176680759052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134638716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.980731,0.0012570785,0.002669079,0.00016898612,0.00008213529,0.000036779405,0.00027022685,0.00018834906,0.014596432],"genre_scores_gemma":[0.9983431,0.00014691998,0.0005712614,0.0000266783,0.000035616402,0.000007212411,0.00007949015,0.000014830158,0.0007749408],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9996593,0.00003352145,0.000037452624,0.000097708704,0.000075397365,0.00009664195],"domain_scores_gemma":[0.9993124,0.00020545445,0.00019384998,0.000110786386,0.000049857343,0.00012764138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002575623,0.00067168416,0.00026749916,0.0016509522,0.0005755413,0.0008037316,0.0005180207,0.0010314102,0.00509512],"category_scores_gemma":[0.0012274822,0.00030468416,0.00028762443,0.0013101221,0.0009499241,0.00076797634,0.0009605702,0.00045082453,0.0014049874],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038604328,0.00005127401,0.09563596,0.00018376697,0.00007756615,0.7748551,0.0005708262,0.0003268137,0.11449242,0.0014526183,0.0006035874,0.011364128],"study_design_scores_gemma":[0.000015652413,0.00006635292,0.044395242,0.000012867934,0.0000673481,0.93335205,0.0004245477,0.00052161206,0.01663471,0.00093605503,0.0035557915,0.000017882914],"about_ca_topic_score_codex":0.00038489484,"about_ca_topic_score_gemma":0.00051346613,"teacher_disagreement_score":0.00509512,"about_ca_system_score_codex":0.0002939235,"about_ca_system_score_gemma":0.00023905194,"threshold_uncertainty_score":0.017044902},"labels":[],"label_agreement":null},{"id":"W3135698139","doi":"10.1038/s41379-021-00779-w","title":"New developments in existing WHO entities and evolving molecular concepts: The Genitourinary Pathology Society (GUPS) update on renal neoplasia","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":250,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of British Columbia; Royal Columbian Hospital; University of Calgary","funders":"","keywords":"Chromophobe cell; Clear cell; Pathology; Renal cell carcinoma; Oncocytoma; Medicine; Hematopathology; Clear cell renal cell carcinoma; Surgical pathology; Kidney cancer; Cancer; Biology; Internal medicine; Cytogenetics","score_opus":0.02497866581627378,"score_gpt":0.2804893520106929,"score_spread":0.25551068619441913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135698139","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015897473,0.9454829,0.0020370441,0.026492061,0.011240501,0.000023212602,0.00031039643,0.00019970966,0.012624459],"genre_scores_gemma":[0.013279012,0.93171495,0.0066346577,0.021739168,0.020818051,0.000034781355,0.0010032571,0.00008767003,0.0046884315],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99898463,0.00023805762,0.0001840158,0.00010577029,0.00036866515,0.00011879389],"domain_scores_gemma":[0.9956536,0.001850118,0.00047641946,0.00013252097,0.0015123152,0.00037490038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025211542,0.00065431267,0.0009394,0.003680883,0.000503648,0.002105017,0.0008958674,0.0015675401,0.0038851076],"category_scores_gemma":[0.0064060027,0.0002713928,0.00077739934,0.003372518,0.00084195693,0.0032478415,0.0015199047,0.0027660038,0.0013642678],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010970316,0.000039265105,0.0029845166,0.002713335,0.00006771306,0.00069187663,0.00017373303,0.00042151127,0.00080952625,0.004673674,0.2886233,0.6986918],"study_design_scores_gemma":[0.000013711067,0.00004250082,0.0020111937,0.0023290983,0.000084609834,0.002502632,0.00013111827,0.00012694258,0.00023026747,0.0015961279,0.99091154,0.000020212594],"about_ca_topic_score_codex":0.0037249317,"about_ca_topic_score_gemma":0.011195843,"teacher_disagreement_score":0.0038851076,"about_ca_system_score_codex":0.0015135803,"about_ca_system_score_gemma":0.00353505,"threshold_uncertainty_score":0.013333321},"labels":[],"label_agreement":null},{"id":"W3139388345","doi":"10.1038/s41379-021-00775-0","title":"Correction to: Novel, emerging and provisional renal entities: the Genitourinary Pathology Society (GUPS) update on renal neoplasia","year":2021,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of British Columbia; Royal Columbian Hospital; University of Calgary","funders":"","keywords":"Pathology; Genitourinary system; Renal pathology; Medicine; Kidney; Internal medicine","score_opus":0.01748611672678064,"score_gpt":0.26215517085601797,"score_spread":0.24466905412923734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139388345","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000082285165,0.0033455035,0.00035101493,0.06828974,0.9237924,0.000022310684,0.00047165935,0.00015079364,0.0034943975],"genre_scores_gemma":[0.0060388874,0.021920381,0.0034683691,0.13284397,0.74478996,0.00012824609,0.0015240506,0.0007113035,0.088574834],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99704045,0.0005391306,0.00051355007,0.00037136223,0.0012068474,0.0003285484],"domain_scores_gemma":[0.97991806,0.005108039,0.0014526311,0.000843142,0.010991712,0.0016864754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030953856,0.0015716262,0.0015857605,0.0038255812,0.0021007403,0.0037846176,0.0021671238,0.0064872857,0.040919952],"category_scores_gemma":[0.042015485,0.00073743,0.0012742748,0.0020575165,0.0019719433,0.0026203343,0.0019364182,0.010970996,0.024835952],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001471035,0.0000029504488,0.00006191057,0.00011612994,0.0000045744887,0.00020448411,0.000012320191,0.000025812938,0.000019218767,0.00032538554,0.99215335,0.007059205],"study_design_scores_gemma":[0.000024273862,0.000009788334,0.0003567838,0.0006180768,0.000017959497,0.0007960297,0.00005114531,0.000083292296,0.00010246808,0.0006799695,0.99724174,0.000018554229],"about_ca_topic_score_codex":0.010256373,"about_ca_topic_score_gemma":0.017155109,"teacher_disagreement_score":0.040919952,"about_ca_system_score_codex":0.0026534873,"about_ca_system_score_gemma":0.0067364248,"threshold_uncertainty_score":0.13689089},"labels":[],"label_agreement":null},{"id":"W3153404381","doi":"10.1038/s41379-021-00756-3","title":"Abstracts from USCAP 2021: Education (271-295)","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Pathology; Medicine","score_opus":0.013491939813853222,"score_gpt":0.25140401754040453,"score_spread":0.23791207772655132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153404381","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011692203,0.0009190204,0.0021478946,0.006334211,0.007169283,0.00060201227,0.03047622,0.0069609145,0.94422114],"genre_scores_gemma":[0.002031092,0.0005474982,0.00073193555,0.0021175712,0.0010774718,0.00023015993,0.01261549,0.00092936406,0.97971934],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99931383,0.000102551516,0.00005618229,0.00010140123,0.0002946379,0.00013134978],"domain_scores_gemma":[0.9952767,0.00044715637,0.00014036625,0.00024399269,0.0020473932,0.0018444525],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001156895,0.0012423452,0.00072687987,0.0021419239,0.0011430493,0.0036361874,0.0012756293,0.0023201716,0.9124614],"category_scores_gemma":[0.0026926794,0.0004272692,0.0006625026,0.0016977855,0.00029382936,0.0017782511,0.0027665945,0.0016971728,0.8628057],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003546771,0.000057980316,0.00006776763,0.00008252462,0.0000012303709,0.000014949612,0.00000753902,0.000031513104,0.00016004956,0.00015597744,0.96222407,0.037160862],"study_design_scores_gemma":[0.000034590532,0.00004844477,0.0007213991,0.00015176786,0.0000022906781,0.000019420968,0.000023863538,0.000109447814,0.0001637233,0.00026245703,0.9984555,0.0000071533223],"about_ca_topic_score_codex":0.004503781,"about_ca_topic_score_gemma":0.008370181,"teacher_disagreement_score":0.9124614,"about_ca_system_score_codex":0.0012016875,"about_ca_system_score_gemma":0.0022807308,"threshold_uncertainty_score":0.12486309},"labels":[],"label_agreement":null},{"id":"W3154484377","doi":"10.1038/s41379-021-00805-x","title":"Unclassified low grade spindle cell sarcoma with storiform pattern characterized by recurrent novel EWSR1/FUS-NACC1 fusions","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"National Cancer Institute; U.S. Department of Health and Human Services","keywords":"Biology; Pathology; Sarcoma; Soft tissue; Fusion gene; SOX10; Gene; Neural crest; Medicine; Genetics","score_opus":0.02815497806088897,"score_gpt":0.2597113879986238,"score_spread":0.23155640993773485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154484377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98252803,0.0009952664,0.003407273,0.0002440301,0.000049310456,0.00009820894,0.00061664096,0.00017119828,0.011890091],"genre_scores_gemma":[0.99772745,0.00016192009,0.0007653135,0.000035393437,0.000016024052,0.000011891666,0.00021939923,0.000014227154,0.0010482916],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997696,0.000015521302,0.000022143791,0.00006104478,0.00006656585,0.00006507237],"domain_scores_gemma":[0.999603,0.00007416631,0.00012068117,0.00006613855,0.00004831809,0.000087764434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024277829,0.00062657596,0.00026578264,0.0008016931,0.00040843774,0.00066101045,0.0004684207,0.000823912,0.0028327047],"category_scores_gemma":[0.0009303568,0.00016999911,0.00021946926,0.0006836154,0.0006714397,0.00042191744,0.0005045285,0.00033478186,0.0008715716],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041278926,0.00006242881,0.06803496,0.00022397912,0.00007350378,0.7841882,0.00072117953,0.0013480553,0.11601307,0.0033844924,0.0017390896,0.023798265],"study_design_scores_gemma":[0.00003586271,0.00014932183,0.07970094,0.000031848685,0.00012454065,0.8762614,0.0006147446,0.0043170988,0.027027788,0.0027938327,0.008912266,0.000030406403],"about_ca_topic_score_codex":0.0012182107,"about_ca_topic_score_gemma":0.0018377204,"teacher_disagreement_score":0.0028327047,"about_ca_system_score_codex":0.0005507402,"about_ca_system_score_gemma":0.00031322622,"threshold_uncertainty_score":0.009476364},"labels":[],"label_agreement":null},{"id":"W3160066513","doi":"10.1038/s41379-021-00818-6","title":"Re-evaluating tumors of purported specialized prostatic stromal origin reveals molecular heterogeneity, including non-recurring gene fusions characteristic of uterine and soft tissue sarcoma subtypes","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Urologic and reproductive health conditions","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"Brigham and Women's Hospital","keywords":"Stromal cell; Biology; Pathology; Prostate; Sarcoma; Mesenchymal stem cell; Cancer research; Cancer; Medicine; Genetics","score_opus":0.07062539781728172,"score_gpt":0.3888117364852353,"score_spread":0.3181863386679536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160066513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98805726,0.001861266,0.0036541347,0.00026169737,0.000030750245,0.000040967127,0.0002618634,0.00019567188,0.0056363684],"genre_scores_gemma":[0.99604493,0.0004944357,0.002117453,0.00006336464,0.000018760982,0.000007880741,0.00026176122,0.000039596576,0.00095172826],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99968123,0.000024976705,0.000030833377,0.000074654476,0.00009046011,0.000097784025],"domain_scores_gemma":[0.9993801,0.00016569612,0.00007603766,0.00014581358,0.000112717586,0.00011966465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004273527,0.00035631392,0.00037367485,0.0022213527,0.0004962033,0.0009588087,0.00040203042,0.0006299957,0.002468578],"category_scores_gemma":[0.00089551235,0.00021076103,0.00034092498,0.0007347584,0.0005975797,0.0006808128,0.0005396509,0.0004516013,0.00081260625],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008811524,0.000049648672,0.1507121,0.00020473998,0.00010142887,0.0352008,0.000729059,0.00066149904,0.76241076,0.00080894073,0.0005812507,0.04765869],"study_design_scores_gemma":[0.000034949135,0.00033160558,0.37295318,0.00006566826,0.0004166447,0.2836438,0.0025690936,0.0070455465,0.3150863,0.0019842794,0.015825344,0.000043690463],"about_ca_topic_score_codex":0.0016021294,"about_ca_topic_score_gemma":0.002541146,"teacher_disagreement_score":0.002468578,"about_ca_system_score_codex":0.00034186247,"about_ca_system_score_gemma":0.00034132384,"threshold_uncertainty_score":0.0082582235},"labels":[],"label_agreement":null},{"id":"W3160071519","doi":"10.1038/modpathol.2014.17","title":"Hematopathology","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Hematological disorders and diagnostics","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Hematopathology; Pathology; Medicine; Biology","score_opus":0.01461931411364167,"score_gpt":0.26556273079802006,"score_spread":0.2509434166843784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160071519","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028211974,0.033874165,0.01859045,0.017078117,0.00640352,0.0002676828,0.00097096286,0.0019035501,0.8926996],"genre_scores_gemma":[0.24223311,0.024977412,0.01986071,0.01136314,0.008242165,0.00014937176,0.0017124675,0.00047602828,0.6909856],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996754,0.00006328728,0.000022745364,0.00005922947,0.00011992041,0.000059496688],"domain_scores_gemma":[0.9994708,0.00007472479,0.000044695378,0.00014627558,0.00015867029,0.00010487046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048666968,0.00037995062,0.0002161818,0.0019907658,0.0010421575,0.0017505317,0.00056601485,0.001014484,0.07998224],"category_scores_gemma":[0.0011438325,0.00021764441,0.00030274817,0.0009912438,0.0011073406,0.00087002944,0.0013189028,0.0014580229,0.025846101],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001584661,0.00012385767,0.0099902535,0.00052303536,0.000042289048,0.011350641,0.00067830464,0.00015498312,0.024551734,0.081466585,0.2540018,0.61695796],"study_design_scores_gemma":[0.000010169829,0.000019993264,0.0031725573,0.00013426293,0.000015479978,0.023319734,0.00012163272,0.00009082241,0.0043662284,0.008932502,0.95980954,0.000007030293],"about_ca_topic_score_codex":0.0006093401,"about_ca_topic_score_gemma":0.0009962802,"teacher_disagreement_score":0.07998224,"about_ca_system_score_codex":0.00084952364,"about_ca_system_score_gemma":0.0010709658,"threshold_uncertainty_score":0.26756728},"labels":[],"label_agreement":null},{"id":"W3160359312","doi":"10.1038/s41379-021-00820-y","title":"Pituitary neuroendocrine tumors: a model for neuroendocrine tumor classification","year":2021,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; University Health Network","funders":"","keywords":"Neuroendocrine tumors; Pituitary tumors; Pathology; Neuroendocrine differentiation; Medicine; Neuroendocrinology; Hormone; Internal medicine; Cancer","score_opus":0.08890393610316885,"score_gpt":0.3544669990128398,"score_spread":0.2655630629096709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160359312","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007869972,0.9975731,0.00018627502,0.00059527677,0.00040754554,0.000004947892,0.00003639043,0.0000089216,0.0011087706],"genre_scores_gemma":[0.0007454369,0.9971716,0.0003341608,0.0004637647,0.00054862635,0.000005736809,0.00007161112,0.0000019743918,0.00065719767],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975365,0.000047851085,0.000043003205,0.00004493059,0.0000853186,0.000025190177],"domain_scores_gemma":[0.9995561,0.00020198865,0.00006662022,0.000010905758,0.00012185291,0.00004247906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067874946,0.0010240615,0.0014060074,0.0031455338,0.00025627823,0.0014281566,0.00092984113,0.0010002794,0.0035716782],"category_scores_gemma":[0.0010868593,0.00020143199,0.00044888433,0.003223808,0.0006766359,0.0015258729,0.00077598786,0.0020222717,0.0019272242],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006834642,0.000028594412,0.00028020935,0.010016569,0.000058875943,0.00026246428,0.00004502932,0.00044611518,0.00069663103,0.0043212236,0.051056225,0.9327197],"study_design_scores_gemma":[0.000021852482,0.00006320241,0.0009609445,0.005916014,0.00015120445,0.0019359507,0.000088477995,0.00016673401,0.00015612328,0.003130116,0.9873863,0.000022959504],"about_ca_topic_score_codex":0.0021592479,"about_ca_topic_score_gemma":0.0040729623,"teacher_disagreement_score":0.0035716782,"about_ca_system_score_codex":0.0013273787,"about_ca_system_score_gemma":0.0018339047,"threshold_uncertainty_score":0.011948466},"labels":[],"label_agreement":null},{"id":"W3162776772","doi":"10.1038/s41379-021-00821-x","title":"Embryonal rhabdomyosarcoma of the uterine corpus: a clinicopathological and molecular analysis of 21 cases highlighting a frequent association with DICER1 mutations","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"McGill University; University of Chicago","keywords":"Anaplasia; Pathology; Embryonal rhabdomyosarcoma; Biology; Rhabdomyosarcoma; Neuroblastoma RAS viral oncogene homolog; KRAS; Sarcoma; Medicine; Cancer; Internal medicine","score_opus":0.018628308684737575,"score_gpt":0.2891661865481785,"score_spread":0.2705378778634409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162776772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99785656,0.00060679816,0.00035734253,0.000034570738,0.0000051168477,0.000016338534,0.0000982001,0.000009597732,0.0010153757],"genre_scores_gemma":[0.999153,0.00021922565,0.00033813636,0.000010374668,0.000009293427,0.0000068969553,0.00007001175,0.0000026985847,0.00019033128],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99974436,0.000039503615,0.00004009327,0.00007708306,0.000042885924,0.000056105597],"domain_scores_gemma":[0.9992969,0.00027513818,0.00014739732,0.00009571397,0.000052703446,0.0001322286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003782625,0.0005160216,0.0002760197,0.0015200082,0.0006003658,0.00047944827,0.00044571547,0.0005391758,0.0017067014],"category_scores_gemma":[0.0012327436,0.00039481884,0.0002362883,0.00068104645,0.000912879,0.00035439985,0.0006931194,0.00019645314,0.00030265236],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057852024,0.00007515967,0.37011978,0.00023949925,0.00008709117,0.52941793,0.0012871003,0.0004831254,0.08424664,0.00046150252,0.00040541482,0.012598261],"study_design_scores_gemma":[0.0000350578,0.00020608053,0.36186513,0.00003637572,0.00011870787,0.61702067,0.0007200954,0.0006239263,0.015992556,0.0002364941,0.0031117836,0.000033068834],"about_ca_topic_score_codex":0.00042987836,"about_ca_topic_score_gemma":0.00072208623,"teacher_disagreement_score":0.0017067014,"about_ca_system_score_codex":0.00025793363,"about_ca_system_score_gemma":0.00022064864,"threshold_uncertainty_score":0.0057094693},"labels":[],"label_agreement":null},{"id":"W3166073921","doi":"10.1038/s41379-021-00846-2","title":"DEK-AFF2 fusion-associated papillary squamous cell carcinoma of the sinonasal tract: clinicopathologic characterization of seven cases with deceptively bland morphology","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Head and Neck Surgical Oncology","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Pathology; Lymph node; Fluorescence in situ hybridization; Carcinoma; Fusion gene; Medicine; Biology; Chromosome; Gene","score_opus":0.022795007040002778,"score_gpt":0.2588773408542032,"score_spread":0.23608233381420043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3166073921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979214,0.00019235637,0.0006348499,0.000029336787,0.000009156911,0.000024445388,0.00009179193,0.000018020824,0.0010786495],"genre_scores_gemma":[0.99928135,0.00006460679,0.00034630057,0.000015834175,0.0000073259266,0.000006991048,0.00009565591,0.000008593168,0.00017340717],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9992962,0.000045095225,0.00010154354,0.00018560626,0.00017213805,0.000199433],"domain_scores_gemma":[0.9981535,0.0005667916,0.00027607143,0.00043128713,0.00018436961,0.0003880683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007226521,0.000783668,0.000529843,0.0014315437,0.0016679538,0.0010253999,0.0010412957,0.0009105574,0.0014636891],"category_scores_gemma":[0.0026021765,0.00067025056,0.0006682102,0.0009421383,0.0022923977,0.0005656303,0.0014503346,0.00073135283,0.00048494153],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004986986,0.000114128365,0.4504102,0.000101712525,0.00006110949,0.5159223,0.0017096373,0.0003331794,0.024826482,0.0003402467,0.00021756327,0.005464759],"study_design_scores_gemma":[0.00002713203,0.0003493632,0.3041003,0.000018865441,0.000113019734,0.67839444,0.0016614338,0.0010671363,0.012128632,0.00031015955,0.0017828596,0.000046585934],"about_ca_topic_score_codex":0.0032082666,"about_ca_topic_score_gemma":0.0050930316,"teacher_disagreement_score":0.0032082666,"about_ca_system_score_codex":0.0008441025,"about_ca_system_score_gemma":0.0006733904,"threshold_uncertainty_score":0.006379187},"labels":[],"label_agreement":null},{"id":"W3166945880","doi":"10.1038/s41379-021-00850-6","title":"Deep-learning based classification distinguishes sarcomatoid malignant mesotheliomas from benign spindle cell mesothelial proliferations","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia Hospital; Canada's Michael Smith Genome Sciences Centre; St. Paul's Hospital; University of British Columbia","funders":"University of British Columbia","keywords":"Mesothelioma; Medicine; Pathology; Malignancy; Hematopathology; Biopsy; Radiology; Biology","score_opus":0.017785829286174122,"score_gpt":0.24850114003612403,"score_spread":0.23071531074994991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3166945880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9587889,0.0009544894,0.035238933,0.00048208187,0.000088845205,0.00005950325,0.00072289526,0.00038140436,0.0032830026],"genre_scores_gemma":[0.9920574,0.00017490162,0.0060580927,0.000049402384,0.000028054294,0.000012584428,0.000663609,0.000015646363,0.0009404665],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99976,0.000035624013,0.000025328174,0.00004923081,0.000052208386,0.00007754938],"domain_scores_gemma":[0.99946517,0.00015544635,0.00008162259,0.00004465325,0.00016957005,0.00008354841],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005644775,0.00041322786,0.0002788135,0.0013805558,0.0002101426,0.000985097,0.00044353673,0.0007315205,0.0011371033],"category_scores_gemma":[0.0015280152,0.00015106382,0.0004349449,0.00042524686,0.00023347151,0.00061607285,0.00077122485,0.00047720273,0.0006355652],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093313784,0.00031067902,0.36248046,0.00019990846,0.00016769853,0.0012008722,0.00023980619,0.025077326,0.05249589,0.0018661732,0.0059581357,0.5490699],"study_design_scores_gemma":[0.000053199365,0.00025902322,0.15425082,0.00014803512,0.0001919841,0.002152959,0.00045311401,0.80711913,0.023230422,0.006423546,0.0056743333,0.000043421504],"about_ca_topic_score_codex":0.002002609,"about_ca_topic_score_gemma":0.0033297325,"teacher_disagreement_score":0.002002609,"about_ca_system_score_codex":0.00032974317,"about_ca_system_score_gemma":0.00040188292,"threshold_uncertainty_score":0.0039818883},"labels":[],"label_agreement":null},{"id":"W3172274432","doi":"10.1038/s41379-021-00843-5","title":"EWSR1-WT1 gene fusions in neoplasms other than desmoplastic small round cell tumor: a report of three unusual tumors involving the female genital tract and review of the literature","year":2021,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Desmoplastic small-round-cell tumor; Desmin; Pathology; Biology; Sarcoma; S100 protein; Smooth Muscle Tumor; Fusion gene; Immunohistochemistry; Medicine; Vimentin; Gene","score_opus":0.05296298346701572,"score_gpt":0.30284042689092106,"score_spread":0.24987744342390533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172274432","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002129692,0.9963397,0.0002322806,0.00016542313,0.000100448146,0.0000073445813,0.000048031372,0.000011550726,0.00096549984],"genre_scores_gemma":[0.0062755845,0.99252105,0.00036833147,0.00021553106,0.00014794893,0.0000043820605,0.000074115655,0.000002794416,0.0003903428],"study_design_codex":"design_other","study_design_gemma":"case_report","domain_scores_codex":[0.9997441,0.000024102077,0.00008899881,0.000055720808,0.000068417605,0.00001858467],"domain_scores_gemma":[0.99951327,0.00026186256,0.000116687756,0.000016394843,0.000057781657,0.000034084253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033355437,0.00074923824,0.0013989559,0.004018801,0.00028560343,0.00094352977,0.000916746,0.0010002666,0.0016285263],"category_scores_gemma":[0.0007822143,0.0003231369,0.00060108583,0.0036283217,0.0005851349,0.0015951396,0.0005477632,0.0007963364,0.0008420039],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016127399,0.000095841715,0.004104425,0.037583575,0.00044845822,0.04749854,0.00042872326,0.00047209352,0.010607442,0.0008984548,0.013948533,0.8837526],"study_design_scores_gemma":[0.00003599602,0.00024360087,0.018563863,0.011241817,0.0018546314,0.3609564,0.0009202243,0.00023389854,0.004985231,0.0013108294,0.5995143,0.00013926234],"about_ca_topic_score_codex":0.0010887929,"about_ca_topic_score_gemma":0.0022486537,"teacher_disagreement_score":0.004018801,"about_ca_system_score_codex":0.00041564254,"about_ca_system_score_gemma":0.0008657257,"threshold_uncertainty_score":0.005447924},"labels":[],"label_agreement":null},{"id":"W3175515112","doi":"10.1038/s41379-021-00857-z","title":"The clinicopathologic spectrum and genomic landscape of de-/trans-differentiated melanoma","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Medical Research Council","keywords":"Pathology; Melanoma; Atypical fibroxanthoma; Medicine; Immunohistochemistry; Lentigo maligna; Dermatology; Cancer research","score_opus":0.015270563389628795,"score_gpt":0.24931225141870983,"score_spread":0.23404168802908104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175515112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872684,0.002982098,0.001435376,0.00048673587,0.000013977037,0.00001973482,0.00036246332,0.00003757342,0.007393656],"genre_scores_gemma":[0.9973226,0.0009983216,0.00075400725,0.000080553866,0.000018249264,0.0000062050685,0.00033176682,0.00001276497,0.0004755623],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99970824,0.00005215174,0.000024082026,0.00008010488,0.000066795394,0.00006865548],"domain_scores_gemma":[0.999509,0.00010367142,0.00018320562,0.000054897413,0.00008659941,0.00006252226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041982095,0.00026191026,0.00016960972,0.001155871,0.00034733638,0.0008365525,0.0003236231,0.0003216404,0.002600421],"category_scores_gemma":[0.0012343457,0.00018881241,0.0001741163,0.00083072076,0.00045310686,0.00057048013,0.0005460336,0.000376509,0.00039164096],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005518626,0.00006823961,0.8628486,0.00012785157,0.00007040537,0.0135141,0.0005475627,0.00067555415,0.058213685,0.0028420337,0.0009488401,0.05959122],"study_design_scores_gemma":[0.000013080005,0.00017067559,0.8961079,0.00007619113,0.00011317994,0.08301717,0.0014855091,0.0012829144,0.006064193,0.004186091,0.007466881,0.000016131053],"about_ca_topic_score_codex":0.0008135476,"about_ca_topic_score_gemma":0.0012786838,"teacher_disagreement_score":0.002600421,"about_ca_system_score_codex":0.00023340297,"about_ca_system_score_gemma":0.00019537026,"threshold_uncertainty_score":0.008699298},"labels":[],"label_agreement":null},{"id":"W3181270705","doi":"10.1038/s41379-021-00865-z","title":"Interobserver variability in the assessment of stromal tumor-infiltrating lymphocytes (sTILs) in triple-negative invasive breast carcinoma influences the association with pathological complete response: the IVITA study","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"Cliniques Universitaires Saint-Luc; U.S. Department of Health and Human Services; National Cancer Institute; Fondation contre le Cancer; Stichting Tegen Kanker; Fondation Saint Luc","keywords":"Medicine; Biopsy; Pathological; Breast cancer; Pathology; Intraclass correlation; Renal cell carcinoma; Cancer; Internal medicine","score_opus":0.03240910133872378,"score_gpt":0.3029422878647602,"score_spread":0.2705331865260364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181270705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99549854,0.0013798329,0.0015728361,0.000039788596,0.000035107485,0.000013925932,0.000113311275,0.000022589538,0.0013240939],"genre_scores_gemma":[0.9994727,0.000052916257,0.0001812037,0.000012300763,0.000022487433,0.000007585091,0.000081215556,0.00001259684,0.0001570194],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.994991,0.0026008196,0.0004582548,0.00089671597,0.0007925518,0.00026065094],"domain_scores_gemma":[0.9762734,0.014215228,0.0039441474,0.0033712822,0.0016713395,0.00052458915],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.009138232,0.00049490767,0.00057668594,0.0012076843,0.00033252183,0.0011593772,0.00053039653,0.00072689087,0.0008586964],"category_scores_gemma":[0.017559204,0.00029584116,0.00060581637,0.0006816468,0.0005397548,0.0006667738,0.00085017836,0.0006619053,0.00029967318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014585603,0.0000244996,0.98651344,0.0000346607,0.00035891327,0.0000537689,0.00035828023,0.00036979996,0.0030365628,0.000049347094,0.00012014541,0.0076219444],"study_design_scores_gemma":[0.000015729465,0.0003466137,0.99296945,0.000018890647,0.00028604944,0.00040826667,0.0002972374,0.0027324227,0.002075661,0.00015284689,0.00067753025,0.000019236371],"about_ca_topic_score_codex":0.00086727424,"about_ca_topic_score_gemma":0.001227429,"teacher_disagreement_score":0.9908618,"about_ca_system_score_codex":0.00028758796,"about_ca_system_score_gemma":0.00022393267,"threshold_uncertainty_score":0.04832816},"labels":[],"label_agreement":null},{"id":"W3190233613","doi":"10.1038/s41379-021-00885-9","title":"EZH2 expression is associated with inferior overall survival in mantle cell lymphoma","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Cancer Institute; University of Texas MD Anderson Cancer Center; National Institutes of Health","keywords":"Mantle cell lymphoma; Hematopathology; Pathology; EZH2; Lymphoma; Medicine; Biology; Gene expression; Cytogenetics","score_opus":0.011199107785276718,"score_gpt":0.2346675892026147,"score_spread":0.223468481417338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3190233613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986218,0.0006423736,0.00016243273,0.00004314905,0.0000052211426,9.249269e-7,0.00007404908,0.000008214019,0.0004418939],"genre_scores_gemma":[0.99951446,0.00010818772,0.00004165419,0.000012703702,0.000015421301,9.931462e-7,0.00007208313,0.000002561051,0.0002320377],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998847,0.000026777148,0.000009707626,0.00002843907,0.000024372432,0.000026112068],"domain_scores_gemma":[0.99954766,0.00011833322,0.0001986708,0.000034856286,0.000031980468,0.00006856521],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023463058,0.00016119373,0.0002498323,0.0005456411,0.00018125608,0.00046993748,0.00023154926,0.00025483096,0.0017070904],"category_scores_gemma":[0.0007791121,0.00013284368,0.00014177116,0.0006200162,0.0002764055,0.00023076049,0.00023717033,0.00028969758,0.00021207474],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019686643,0.00004264864,0.9322342,0.000043001462,0.00018558599,0.0008165503,0.00009992001,0.00020895802,0.052986477,0.00017786612,0.00023448702,0.011001632],"study_design_scores_gemma":[0.000007897029,0.000061721614,0.9964743,0.0000022762213,0.00006014097,0.00076514506,0.00007356514,0.0002731627,0.0017800779,0.00014639052,0.00035208004,0.0000032766332],"about_ca_topic_score_codex":0.00045665685,"about_ca_topic_score_gemma":0.0005896728,"teacher_disagreement_score":0.0017070904,"about_ca_system_score_codex":0.00014136134,"about_ca_system_score_gemma":0.000080479374,"threshold_uncertainty_score":0.005710721},"labels":[],"label_agreement":null},{"id":"W3191947439","doi":"10.1038/s41379-021-00884-w","title":"Quantitative comparison of PD-L1 IHC assays against NIST standard reference material 1934","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Health Authority","funders":"National Cancer Institute; Canadian Association of Pathologists; U.S. Department of Health and Human Services","keywords":"Clearance; NIST; Calibration; Medical physics; Assay sensitivity; Medicine; Pathology; Computer science; Computational biology; Statistics; Mathematics; Biology; Urology","score_opus":0.03033335900786996,"score_gpt":0.312794798522339,"score_spread":0.282461439514469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3191947439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60863626,0.009939848,0.3207383,0.00094398344,0.0012218257,0.0011443233,0.005163596,0.006883029,0.045328815],"genre_scores_gemma":[0.6957364,0.003528659,0.26119098,0.0009885955,0.00019902625,0.0018875847,0.008803339,0.00084794004,0.026817448],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9900506,0.0022413766,0.0004585921,0.002324707,0.0043326993,0.00059183006],"domain_scores_gemma":[0.99513227,0.0014421791,0.00045175423,0.00058290316,0.0022355532,0.00015533701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005833229,0.0013290461,0.00074681605,0.0033245303,0.0011620279,0.0021582618,0.0013374748,0.0011142594,0.0066211675],"category_scores_gemma":[0.0048964387,0.0012040163,0.0008533542,0.0020114388,0.00153249,0.00097410975,0.0013091523,0.0016080912,0.002964287],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011978138,0.00037272295,0.021990452,0.0007566432,0.00043179834,0.00011819929,0.0005882768,0.0011724553,0.91985446,0.0018128989,0.0026378029,0.049066477],"study_design_scores_gemma":[0.00004451567,0.00056356756,0.02707287,0.00011773186,0.00026573878,0.0006378458,0.0003213496,0.010677843,0.94744694,0.00084449997,0.011925044,0.00008205844],"about_ca_topic_score_codex":0.002345452,"about_ca_topic_score_gemma":0.0074975155,"teacher_disagreement_score":0.0066211675,"about_ca_system_score_codex":0.0016258352,"about_ca_system_score_gemma":0.0010707792,"threshold_uncertainty_score":0.030849397},"labels":[],"label_agreement":null},{"id":"W3192891531","doi":"10.1038/s41379-021-00879-7","title":"YAP1-TFE3-fused hemangioendothelioma: a multi-institutional clinicopathologic study of 24 genetically-confirmed cases","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Vascular Tumors and Angiosarcomas","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System","funders":"","keywords":"Pathology; TFE3; Hemangioendothelioma; Biology; Epithelioid hemangioendothelioma; Sarcoma; Eosinophilic; Immunohistochemistry; Medicine; Gene expression","score_opus":0.07003430952342453,"score_gpt":0.3230533691048193,"score_spread":0.25301905958139476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192891531","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992518,0.00009794076,0.00016202618,0.000007741979,0.0000024888393,0.000014295739,0.000106593485,0.0000048834104,0.00035227553],"genre_scores_gemma":[0.99953127,0.00007106485,0.00013267496,0.0000048663733,0.0000047680633,0.000008549144,0.00016672081,0.0000035581252,0.00007650205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99952817,0.00005625021,0.000061938765,0.00015873631,0.00008297718,0.00011195314],"domain_scores_gemma":[0.99900514,0.00020926817,0.00026871637,0.00017337974,0.00012565343,0.0002179669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005686886,0.00060129527,0.00035561045,0.0017634564,0.0012297619,0.0006565008,0.0006017505,0.00047035248,0.0014420231],"category_scores_gemma":[0.0015584535,0.0004311175,0.0004905674,0.0010648435,0.0009006758,0.00042440894,0.0009216395,0.00029065285,0.00039015134],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004180046,0.00015256261,0.9272022,0.00003721416,0.00008971234,0.05365354,0.00086358533,0.00020754251,0.0133919045,0.00012382309,0.00017648947,0.003683348],"study_design_scores_gemma":[0.000035919948,0.00043636415,0.88003445,0.000015100044,0.00020810585,0.10955283,0.0018480839,0.0006354873,0.005723154,0.00011673255,0.0013542228,0.000039517032],"about_ca_topic_score_codex":0.0018381998,"about_ca_topic_score_gemma":0.0022603353,"teacher_disagreement_score":0.0018381998,"about_ca_system_score_codex":0.00044718324,"about_ca_system_score_gemma":0.00038025263,"threshold_uncertainty_score":0.0048240423},"labels":[],"label_agreement":null},{"id":"W3197838407","doi":"10.1038/s41379-021-00898-4","title":"Correction to: Quantitative comparison of PD-L1 IHC assays against NIST standard reference material 1934","year":2021,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Radiomics and Machine Learning in Medical Imaging","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Health Authority","funders":"","keywords":"NIST; Pathology; Medicine; Medical physics; Computer science; Information retrieval; Natural language processing","score_opus":0.03211153992684969,"score_gpt":0.35871918882398746,"score_spread":0.3266076488971378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3197838407","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006010575,0.0010446289,0.0036399409,0.048314735,0.92830986,0.000103706894,0.0078093614,0.0024428202,0.007733867],"genre_scores_gemma":[0.03584554,0.0056927535,0.035011996,0.1258361,0.25287172,0.0008944349,0.0204083,0.012386937,0.51105225],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99405223,0.0007980857,0.0012662824,0.0006670699,0.0027740293,0.0004423882],"domain_scores_gemma":[0.94592315,0.012310506,0.002506798,0.004223657,0.033730023,0.0013057964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0040994193,0.0018804104,0.0018509518,0.005639301,0.002484034,0.0034912988,0.0028903838,0.0052468693,0.11600557],"category_scores_gemma":[0.077458344,0.0015082152,0.001448796,0.0027890364,0.0019767522,0.0019647756,0.0022849652,0.0071298997,0.07379864],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000394435,0.000007323418,0.00009510368,0.00013321223,0.000008453732,0.00013047607,0.000024276393,0.000032008033,0.00008493568,0.00033757527,0.99133074,0.0077764657],"study_design_scores_gemma":[0.000053561773,0.000020375059,0.001240413,0.00031466223,0.000037139638,0.0006810025,0.00008631865,0.00032013454,0.000742995,0.0017564759,0.99470115,0.000045799436],"about_ca_topic_score_codex":0.013524418,"about_ca_topic_score_gemma":0.017689498,"teacher_disagreement_score":0.11600557,"about_ca_system_score_codex":0.002571832,"about_ca_system_score_gemma":0.004173612,"threshold_uncertainty_score":0.38807732},"labels":[],"label_agreement":null},{"id":"W3198217253","doi":"10.1038/s41379-021-00916-5","title":"In Response to “Reexamining the molecular findings in specialized stromal tumors of the prostate”","year":2021,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Urologic and reproductive health conditions","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Stromal cell; Mesenchymal stem cell; Prostate; Sarcoma; Medicine; Pathology; Scopus; Cancer research; Oncology; Biology; Internal medicine; MEDLINE; Cancer","score_opus":0.026317227811571753,"score_gpt":0.29464160912795945,"score_spread":0.2683243813163877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198217253","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000983576,0.00075001206,0.00008737109,0.9780109,0.017541047,0.000023877066,0.000050258914,0.000022527325,0.0025304519],"genre_scores_gemma":[0.0051909937,0.0007491402,0.00024262689,0.9637522,0.02334156,0.00003153565,0.00003424488,0.000021167914,0.00663661],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99772984,0.00051481684,0.0002556654,0.00031102088,0.00056674506,0.00062187004],"domain_scores_gemma":[0.9954342,0.0020513497,0.00036099143,0.00014952985,0.0008532371,0.0011507298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021465754,0.0008993174,0.0011586127,0.00077394856,0.0050338707,0.003985528,0.0021697176,0.051789947,0.005102662],"category_scores_gemma":[0.017724223,0.0009252434,0.001143565,0.0008916228,0.0025034836,0.0027495406,0.0016775419,0.04332234,0.0033966526],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012280305,0.00009369156,0.002020497,0.000082025384,0.000033315348,0.00963985,0.0003759368,0.00013793365,0.00050315,0.0025780345,0.9762305,0.008182363],"study_design_scores_gemma":[0.00018798455,0.0002037164,0.0048382482,0.0005441869,0.00009071122,0.009134752,0.0019141383,0.0010425451,0.0007772825,0.00906472,0.97204125,0.0001603551],"about_ca_topic_score_codex":0.008465532,"about_ca_topic_score_gemma":0.019265624,"teacher_disagreement_score":0.051789947,"about_ca_system_score_codex":0.0043858476,"about_ca_system_score_gemma":0.005240937,"threshold_uncertainty_score":0.03182167},"labels":[],"label_agreement":null},{"id":"W3198243490","doi":"10.1038/s41379-021-00899-3","title":"Solid papillary mesothelial tumor","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; University of British Columbia Hospital","funders":"","keywords":"Mesothelioma; Pathology; Medicine; CDKN2A; BAP1; Mesothelial Cell; Peritoneum; Mucinous Tumor; Peritoneal mesothelioma; Immunohistochemistry; Solitary fibrous tumor; Papillary tumor; Adenomatoid tumor; Cancer; Biology; Internal medicine","score_opus":0.012443250249497145,"score_gpt":0.2870435230209237,"score_spread":0.2746002727714265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198243490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89467484,0.010757527,0.021403857,0.0028654567,0.0006223091,0.00018824168,0.0016245603,0.00087379245,0.066989414],"genre_scores_gemma":[0.9901114,0.0010580573,0.0027726716,0.00014486408,0.0001806177,0.000009863578,0.00018872174,0.000016908754,0.0055169696],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9998549,0.000010352078,0.000016173473,0.000048170503,0.000038771588,0.000031574244],"domain_scores_gemma":[0.9997321,0.000050255774,0.00004282989,0.00008302506,0.00004032523,0.000051512263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017629525,0.00031478138,0.00014715522,0.0008595802,0.0004733002,0.00039534146,0.00032867762,0.0004928619,0.0031522976],"category_scores_gemma":[0.00046409227,0.00014485644,0.00025895447,0.00049553806,0.0004849924,0.0005308401,0.00054653344,0.00044247863,0.0009063196],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040851918,0.00009760756,0.11845588,0.00069831096,0.00012975273,0.5941387,0.0008601602,0.00089928746,0.18380702,0.012655045,0.005068157,0.08278159],"study_design_scores_gemma":[0.00003512492,0.00018195051,0.11607057,0.000066462286,0.00016040594,0.77803814,0.00044578113,0.0032610951,0.031786278,0.007329862,0.06258946,0.000034962693],"about_ca_topic_score_codex":0.0008053818,"about_ca_topic_score_gemma":0.001118589,"teacher_disagreement_score":0.0031522976,"about_ca_system_score_codex":0.00031132856,"about_ca_system_score_gemma":0.00033976906,"threshold_uncertainty_score":0.010545552},"labels":[],"label_agreement":null},{"id":"W3198801808","doi":"10.1038/s41379-021-00920-9","title":"Significance of p53 immunostaining in mesothelial proliferations and correlation with TP53 mutation status","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; BC Cancer Agency; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Staining; Pathology; Immunostaining; Immunohistochemistry; Biology; Mesothelioma; Stain; Medicine","score_opus":0.008512219383350596,"score_gpt":0.24265336621941455,"score_spread":0.23414114683606396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198801808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950649,0.001774662,0.0006404656,0.000068176785,0.000017738328,0.000009264738,0.00005463435,0.000022144108,0.0023479452],"genre_scores_gemma":[0.99923193,0.00023551214,0.00019046018,0.000009344411,0.000014972439,0.0000034578118,0.00002623801,0.0000021115256,0.00028602232],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995981,0.00012351948,0.00006625578,0.000056413275,0.00007511272,0.00008064784],"domain_scores_gemma":[0.998626,0.0005877792,0.0002810658,0.000104960534,0.00020261815,0.00019754547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010461883,0.0002686275,0.00015810465,0.0019302608,0.0003326642,0.00051803654,0.00021556865,0.0003963337,0.0020072553],"category_scores_gemma":[0.0020683373,0.00019020989,0.0002042086,0.00056288746,0.00063367834,0.00046420068,0.00031959853,0.0003048396,0.00029556433],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011426029,0.00007847597,0.8462746,0.000091651156,0.000081195016,0.005362867,0.00021930643,0.00013668803,0.13643926,0.000167676,0.000115359035,0.009890305],"study_design_scores_gemma":[0.000010862552,0.00024913915,0.9611073,0.000015935715,0.00011084134,0.014133114,0.00039734718,0.0009587191,0.021821909,0.00019291019,0.0009926449,0.000009259176],"about_ca_topic_score_codex":0.00049283064,"about_ca_topic_score_gemma":0.00067291694,"teacher_disagreement_score":0.0020072553,"about_ca_system_score_codex":0.00013949421,"about_ca_system_score_gemma":0.00015480233,"threshold_uncertainty_score":0.0067148805},"labels":[],"label_agreement":null},{"id":"W3198967462","doi":"10.1038/s41379-021-00922-7","title":"TSC2-mutant uterine sarcomas with JAZF1-SUZ12 fusions demonstrate hybrid features of endometrial stromal sarcoma and PEComa and are responsive to mTOR inhibition","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Stand Up To Cancer; Memorial Sloan-Kettering Cancer Center; Cycle for Survival; Sanofi; Stryker; Breast Cancer Research Foundation; AstraZeneca; National Cancer Institute; U.S. Department of Health and Human Services","keywords":"Cancer research; Biology; Endometrial stromal sarcoma; Pathology; Epigenetics; Sarcoma; Stromal cell; Medicine; Genetics; Gene","score_opus":0.015135591089485659,"score_gpt":0.2684849680409617,"score_spread":0.2533493769514761,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198967462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951513,0.00043637745,0.0016419853,0.000089779656,0.000028363642,0.000016058106,0.00032447776,0.00007759104,0.0022340275],"genre_scores_gemma":[0.99692243,0.0001351635,0.00097841,0.000029033596,0.000004335668,0.000011883374,0.00031392553,0.000018082952,0.0015867521],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997875,0.000016897433,0.000022375898,0.000038406608,0.00007912575,0.000055668093],"domain_scores_gemma":[0.99978215,0.000035079487,0.00007760068,0.000028634073,0.000016079193,0.00006046965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012203708,0.0002728405,0.00020923729,0.00048696483,0.00028095063,0.0003100723,0.00017435454,0.00041408633,0.0028223444],"category_scores_gemma":[0.0002919838,0.00020373288,0.00022594223,0.00036577758,0.00047789005,0.00021484513,0.00039853872,0.0003728472,0.0004904937],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002519591,0.000020084397,0.002097952,0.000026002272,0.000019372439,0.0021691988,0.000047435442,0.00011302522,0.9927591,0.00042484378,0.00011135244,0.00195959],"study_design_scores_gemma":[0.00005637588,0.00030212707,0.07566048,0.000008457644,0.00006366797,0.03856761,0.00041760787,0.0019247269,0.87349004,0.0004598622,0.00902369,0.000025513606],"about_ca_topic_score_codex":0.0010415263,"about_ca_topic_score_gemma":0.0020298818,"teacher_disagreement_score":0.0028223444,"about_ca_system_score_codex":0.00022763447,"about_ca_system_score_gemma":0.00019599605,"threshold_uncertainty_score":0.009441674},"labels":[],"label_agreement":null},{"id":"W3198999842","doi":"10.1038/s41379-021-00967-8","title":"Correction to: Eosinophilic vacuolated tumor (EVT) of kidney demonstrates sporadic TSC/MTOR mutations: next-generation sequencing multi-institutional study of 19 cases","year":2021,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Tuberous Sclerosis Complex Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University; University of British Columbia; St. John’s Health Sciences Centre; University of Calgary","funders":"","keywords":"Tuberous sclerosis; Pathology; Eosinophilic; Biology; TSC1; CD117; Vimentin; PI3K/AKT/mTOR pathway; Medicine; Immunohistochemistry; Genetics","score_opus":0.17632658862848855,"score_gpt":0.34539729663497887,"score_spread":0.16907070800649032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198999842","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001972806,0.0015296346,0.0015619863,0.06613605,0.9230062,0.0000585749,0.0021521496,0.00048810718,0.0030946136],"genre_scores_gemma":[0.11173949,0.012508454,0.020517534,0.11460562,0.55254537,0.00039362203,0.0065373154,0.0031513423,0.17800127],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99835193,0.0002437931,0.0003872555,0.0003394271,0.00046244435,0.0002151327],"domain_scores_gemma":[0.991662,0.0026519184,0.0007588742,0.0005519479,0.0034709151,0.00090436917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015530081,0.0016986236,0.0014191584,0.0025361797,0.0015498167,0.0018134889,0.0030783974,0.0049764933,0.024743127],"category_scores_gemma":[0.025336545,0.0009134488,0.0010194038,0.0012052773,0.0014979915,0.001395588,0.0011670903,0.005948734,0.010227095],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114219685,0.000017467746,0.00081139425,0.00036926885,0.00004827472,0.012938813,0.00009276373,0.00015546681,0.00029659123,0.00070436654,0.97255546,0.011895792],"study_design_scores_gemma":[0.00017369223,0.00006857444,0.0067199115,0.00086720317,0.00014803972,0.042914677,0.00037840076,0.00092050445,0.0014097565,0.0023151478,0.9439523,0.00013167025],"about_ca_topic_score_codex":0.008745856,"about_ca_topic_score_gemma":0.008846465,"teacher_disagreement_score":0.024743127,"about_ca_system_score_codex":0.0017159316,"about_ca_system_score_gemma":0.0020023696,"threshold_uncertainty_score":0.08277404},"labels":[],"label_agreement":null},{"id":"W3200541484","doi":"10.1038/s41379-021-00866-y","title":"Hypersensitivity pneumonitis: new concepts and classifications","year":2021,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; University of British Columbia Hospital","funders":"","keywords":"Hypersensitivity pneumonitis; Medicine; Usual interstitial pneumonia; Pathology; Idiopathic pulmonary fibrosis; Interstitial lung disease; Pulmonary fibrosis; Pneumonia; Fibrosis; Pneumonitis; Lung; Idiopathic interstitial pneumonia; Internal medicine","score_opus":0.06877686529786813,"score_gpt":0.38020753870159163,"score_spread":0.3114306734037235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200541484","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000043933633,0.9992859,0.00009031385,0.00014267102,0.00017040753,0.0000033185893,0.000012444372,0.0000034163231,0.00024769548],"genre_scores_gemma":[0.0003106171,0.9986786,0.00020467957,0.00019136672,0.00040041516,0.000004901581,0.000024681853,8.928273e-7,0.00018386051],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994628,0.000107768894,0.000111390975,0.00009040576,0.00018590063,0.000041749714],"domain_scores_gemma":[0.99906,0.00046330137,0.00016783777,0.000023820307,0.00020421286,0.00008089012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011137621,0.0014974731,0.002942263,0.005678326,0.0003421463,0.002191619,0.0012822095,0.0012750019,0.0030862025],"category_scores_gemma":[0.0014005404,0.0003743869,0.000871359,0.0053170626,0.0010925236,0.002754494,0.0012418902,0.002561799,0.0013247208],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001062821,0.00007797455,0.0004169184,0.025402185,0.00012459977,0.00027581654,0.00011280692,0.00042122786,0.0010642663,0.0034207378,0.03593363,0.93264353],"study_design_scores_gemma":[0.00005432889,0.00014347212,0.0022579192,0.013181994,0.000391564,0.0035020998,0.00021974012,0.00024159154,0.00024144091,0.0046616136,0.97504085,0.0000634459],"about_ca_topic_score_codex":0.0012590224,"about_ca_topic_score_gemma":0.0024576203,"teacher_disagreement_score":0.005678326,"about_ca_system_score_codex":0.0008937074,"about_ca_system_score_gemma":0.0018226182,"threshold_uncertainty_score":0.010324419},"labels":[],"label_agreement":null},{"id":"W3201468575","doi":"10.1038/s41379-021-00900-z","title":"Molecular characterization of pleomorphic mesothelioma: a multi-institutional study","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"BAP1; CDKN2A; Mesothelioma; Biology; Pathology; Fluorescence in situ hybridization; Comparative genomic hybridization; Chromosome; Copy number analysis; Undifferentiated Pleomorphic Sarcoma; Cancer research; Gene; Copy-number variation; Genetics; Medicine; Sarcoma; Soft tissue sarcoma; Genome","score_opus":0.01967024198218925,"score_gpt":0.26826942710426244,"score_spread":0.24859918512207319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201468575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99892277,0.0002141341,0.00033979578,0.000015462063,0.0000039544075,0.000021063188,0.00018916381,0.0000070231017,0.00028667596],"genre_scores_gemma":[0.99912804,0.00012527952,0.00019700345,0.000020471925,0.000009418257,0.000014360757,0.0003529163,0.000006445488,0.0001461454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992719,0.00011892,0.00007950404,0.00025257538,0.00011345727,0.00016371005],"domain_scores_gemma":[0.99903786,0.00013220239,0.00025965832,0.00021709855,0.00019526323,0.00015788955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007612148,0.00034309222,0.00043544685,0.0021800294,0.0009912887,0.0011767722,0.0004228907,0.00044749797,0.0013254775],"category_scores_gemma":[0.001128604,0.0003669796,0.0005766884,0.0015287662,0.00047267848,0.0007701787,0.0010789863,0.00043114997,0.00040857072],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055244466,0.0001704576,0.9694838,0.00003870646,0.0001722207,0.001618691,0.0004938497,0.00011295134,0.020396573,0.00006256687,0.00016585014,0.0067318515],"study_design_scores_gemma":[0.000016213564,0.00024160896,0.9905132,0.00000989471,0.00016389744,0.00464975,0.00081396295,0.0002752803,0.002155279,0.000058685895,0.0010893131,0.000012977186],"about_ca_topic_score_codex":0.0010321386,"about_ca_topic_score_gemma":0.0013582665,"teacher_disagreement_score":0.0021800294,"about_ca_system_score_codex":0.00039048342,"about_ca_system_score_gemma":0.0003342282,"threshold_uncertainty_score":0.004434228},"labels":[],"label_agreement":null},{"id":"W3203268620","doi":"10.1038/s41379-021-00937-0","title":"Genetic profiling and biomarkers in peripheral T-cell lymphomas: current role in the diagnostic work-up","year":2021,"lang":"en","type":"review","venue":"Modern Pathology","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Lymphoma; Hematopathology; Pathology; Cell of origin; Peripheral T-cell lymphoma; Medicine; Gene expression profiling; Risk stratification; Biology; T cell; Immunology; Internal medicine; Immune system; Cancer; Cytogenetics; Gene; Gene expression","score_opus":0.02403928882087426,"score_gpt":0.27154018237946004,"score_spread":0.2475008935585858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203268620","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008114737,0.9990061,0.00021140123,0.00028600183,0.0001389531,0.0000024553508,0.000020460076,0.000007169051,0.0002462792],"genre_scores_gemma":[0.00078419934,0.9978083,0.00038581775,0.00035429152,0.00034980575,0.000006252665,0.000052675652,0.0000020166947,0.00025663726],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996189,0.00009603416,0.000042566888,0.00007594247,0.00013468282,0.00003189715],"domain_scores_gemma":[0.99874604,0.00077927334,0.00011931499,0.00003409179,0.00025552607,0.00006580627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014110135,0.00093118515,0.0018794726,0.0017094209,0.00014106375,0.0013301971,0.0010289282,0.001233436,0.001848353],"category_scores_gemma":[0.0019780612,0.0002405137,0.0005572947,0.001789143,0.0006064906,0.0011783841,0.0006791027,0.0019561788,0.001436605],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011914184,0.000048463597,0.000616152,0.0057974933,0.00010144508,0.00016516962,0.00002169072,0.00026140147,0.0013570433,0.001793757,0.020446608,0.96927166],"study_design_scores_gemma":[0.000050704635,0.00022670387,0.0036703513,0.0060213967,0.0004482307,0.0025717826,0.00009269933,0.00032590574,0.001529747,0.004384548,0.98062724,0.000050754174],"about_ca_topic_score_codex":0.00073846866,"about_ca_topic_score_gemma":0.0010755596,"teacher_disagreement_score":0.0018794726,"about_ca_system_score_codex":0.00061291317,"about_ca_system_score_gemma":0.0011019296,"threshold_uncertainty_score":0.007462263},"labels":[],"label_agreement":null},{"id":"W3207790982","doi":"10.1038/s41379-021-00935-2","title":"DICER1-sarcoma: an emerging entity","year":2021,"lang":"en","type":"editorial","venue":"Modern Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Sarcoma; Pathology; Medicine","score_opus":0.02241739966127841,"score_gpt":0.3236415958372321,"score_spread":0.3012241961759537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207790982","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010057488,0.017926764,0.00024086038,0.047425564,0.9320305,0.000020730804,0.0000439535,0.00006402617,0.0021471193],"genre_scores_gemma":[0.0004332991,0.0053774347,0.00007861795,0.014529636,0.97758543,0.0000098496075,0.000016062742,0.0000125136385,0.0019571788],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.996775,0.0007370726,0.0006031759,0.00040560594,0.0012721878,0.00020705817],"domain_scores_gemma":[0.9821169,0.009799835,0.0013742218,0.0004936079,0.003937377,0.0022779813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0050502564,0.0039876243,0.0045941016,0.0045579784,0.002503044,0.006570577,0.0038669878,0.025541725,0.005126615],"category_scores_gemma":[0.021836238,0.0018250992,0.001986198,0.0017470497,0.0035283123,0.0061961045,0.0019799466,0.02567647,0.007339105],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006160259,0.000017126404,0.00009360071,0.00044762617,0.000037207654,0.0019071561,0.000021232212,0.000047877013,0.000097824035,0.000518161,0.9884304,0.00832025],"study_design_scores_gemma":[0.00014680211,0.0000847236,0.000828539,0.0017155786,0.00019788831,0.0077435854,0.000099044184,0.0005558955,0.0002067085,0.0021514744,0.98620254,0.000067254696],"about_ca_topic_score_codex":0.0011899365,"about_ca_topic_score_gemma":0.0029038426,"teacher_disagreement_score":0.025541725,"about_ca_system_score_codex":0.003488133,"about_ca_system_score_gemma":0.0016520701,"threshold_uncertainty_score":0.026708603},"labels":[],"label_agreement":null},{"id":"W3208099436","doi":"10.1038/s41379-021-00949-w","title":"Gastrointestinal stromal tumors (GISTs) arising in uncommon locations: clinicopathologic features and risk assessment of esophageal, colonic, and appendiceal GISTs","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gastrointestinal Tumor Research and Treatment","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"GiST; Rectum; Esophagus; Mitotic index; Gastroenterology; Medicine; Stomach; Pathology; Internal medicine; Mitosis; Stromal cell; Biology","score_opus":0.022359011764005232,"score_gpt":0.3398126667482756,"score_spread":0.31745365498427036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208099436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99680954,0.0012085154,0.00049595477,0.00004971303,0.000007515845,0.000008023406,0.00008054767,0.000009469088,0.0013306575],"genre_scores_gemma":[0.99892163,0.00037323282,0.00041400353,0.000013261891,0.000026629737,0.000004644244,0.000115223884,0.0000028739305,0.00012852107],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99969554,0.000058279245,0.000057595436,0.00005224616,0.00007749456,0.00005895222],"domain_scores_gemma":[0.9990441,0.00018476463,0.00043426215,0.00005467891,0.000090464986,0.00019172856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005440068,0.0003729586,0.00034780873,0.0014215054,0.00036872757,0.0008879898,0.00020533986,0.00038712184,0.0011190482],"category_scores_gemma":[0.0017956218,0.00016745382,0.0002681572,0.001135052,0.00043399044,0.000714463,0.00058198126,0.0002901116,0.00027194427],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017197401,0.000019517141,0.98699516,0.000021477745,0.000022024933,0.004491356,0.000114294206,0.00010807792,0.002257951,0.00011367633,0.00007518091,0.005609448],"study_design_scores_gemma":[0.000011769073,0.00019493145,0.9234557,0.000021577796,0.00007684873,0.0719515,0.0010836405,0.0008182029,0.00078339956,0.00044194527,0.0011488256,0.0000116595465],"about_ca_topic_score_codex":0.00027729452,"about_ca_topic_score_gemma":0.0004911543,"teacher_disagreement_score":0.0014215054,"about_ca_system_score_codex":0.0001670698,"about_ca_system_score_gemma":0.00024543732,"threshold_uncertainty_score":0.003743589},"labels":[],"label_agreement":null},{"id":"W4200082979","doi":"10.1038/s41379-021-00998-1","title":"Expanding the clinicopathological spectrum of succinate dehydrogenase-deficient renal cell carcinoma with a focus on variant morphologies: a study of 62 new tumors in 59 patients","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; McGill University; Calgary Laboratory Services; McMaster University","funders":"","keywords":"Pathology; Renal cell carcinoma; SDHB; Eosinophilic; Immunohistochemistry; SDHA; Grading (engineering); Medicine; Clear cell; Biology; Succinate dehydrogenase; Germline mutation; Mutation","score_opus":0.030695010180928732,"score_gpt":0.2649943465478186,"score_spread":0.23429933636688988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200082979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99876887,0.00047333702,0.00022567179,0.000011202519,0.0000043367945,0.000008231163,0.000062001825,0.0000026891762,0.0004437499],"genre_scores_gemma":[0.9994331,0.00021361675,0.00012298524,0.000012237924,0.000011935909,0.000004745681,0.00011138491,0.0000027727997,0.00008719304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999445,0.00007436882,0.00007109654,0.00018050104,0.000107675034,0.00012124532],"domain_scores_gemma":[0.99934524,0.00020056145,0.00012935606,0.00008776348,0.00008638454,0.00015064352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004858268,0.000317075,0.0005168521,0.0016191192,0.00070633256,0.00070694066,0.0003116757,0.000337509,0.0011876825],"category_scores_gemma":[0.0013676768,0.0003187988,0.0003908415,0.0012740236,0.000563987,0.00069545646,0.0008670184,0.0003123325,0.00031692875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017203859,0.000046717978,0.9885719,0.000013419012,0.000022690812,0.00298393,0.00027951985,0.00005210684,0.0022671865,0.00004215372,0.000054686658,0.005493574],"study_design_scores_gemma":[0.000010189154,0.00012572612,0.9825424,0.000009474332,0.000053113472,0.014974252,0.00076215056,0.00024368693,0.0004361868,0.00006502636,0.0007677005,0.000010238275],"about_ca_topic_score_codex":0.001241007,"about_ca_topic_score_gemma":0.0016028488,"teacher_disagreement_score":0.0016191192,"about_ca_system_score_codex":0.00020036583,"about_ca_system_score_gemma":0.00030732495,"threshold_uncertainty_score":0.003973186},"labels":[],"label_agreement":null},{"id":"W4205203491","doi":"10.1038/s41379-021-00923-6","title":"Eosinophilic vacuolated tumor (EVT) of kidney demonstrates sporadic TSC/MTOR mutations: next-generation sequencing multi-institutional study of 19 cases","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Tuberous Sclerosis Complex Research","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University; University of British Columbia; St. John’s Health Sciences Centre; University of Calgary","funders":"Ministerstvo Zdravotnictví Ceské Republiky","keywords":"Tuberous sclerosis; Eosinophilic; Pathology; CD117; Biology; Angiomyolipoma; Molecular pathology; Vimentin; Immunohistochemistry; Medicine; Kidney; Genetics; Stem cell","score_opus":0.23318939047007486,"score_gpt":0.34865291967809564,"score_spread":0.11546352920802078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205203491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986779,0.00016375212,0.0004723986,0.000017352066,0.0000036918334,0.00001450475,0.00014505046,0.000010770721,0.00049448386],"genre_scores_gemma":[0.9992957,0.000083744264,0.0003366873,0.000015636351,0.000005619164,0.000004536222,0.00016137835,0.00000681202,0.000089870875],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994357,0.000051049577,0.00006459786,0.0002337395,0.000104189014,0.0001108158],"domain_scores_gemma":[0.99921346,0.00020656135,0.00016757338,0.000116665775,0.00011742593,0.0001782818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044804814,0.0004347936,0.0003640486,0.0015863744,0.0012370257,0.00083427026,0.0006336684,0.0006142834,0.001516969],"category_scores_gemma":[0.0013520059,0.0005120404,0.0004969906,0.0009747731,0.0008365051,0.00042481147,0.0009167473,0.0003425951,0.00030470625],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029001673,0.00017193954,0.8854439,0.00005666866,0.00016886127,0.089889,0.0011249079,0.00028195864,0.015603969,0.00016543687,0.0002562649,0.0065470533],"study_design_scores_gemma":[0.000031617918,0.00024868018,0.7950762,0.00003253297,0.00029820853,0.19338185,0.0013922198,0.00096196966,0.006734977,0.00020703062,0.0015945127,0.00004021978],"about_ca_topic_score_codex":0.0018973976,"about_ca_topic_score_gemma":0.0029046517,"teacher_disagreement_score":0.0018973976,"about_ca_system_score_codex":0.00038361768,"about_ca_system_score_gemma":0.00036318268,"threshold_uncertainty_score":0.0050747395},"labels":[],"label_agreement":null},{"id":"W4205254825","doi":"10.1038/modpathol.3880017","title":"Announcements","year":2000,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Human auditory perception and evaluation","field":"Engineering","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Medicine; Pathology","score_opus":0.01871882755872376,"score_gpt":0.23952591799978368,"score_spread":0.22080709044105992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205254825","genre_codex":"other","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002367146,0.0023306778,0.0021144897,0.16230768,0.37276053,0.001345306,0.009942989,0.0033483214,0.44348288],"genre_scores_gemma":[0.0035976015,0.00032939983,0.00053833384,0.03126357,0.021173982,0.0002164477,0.0018029045,0.0003070594,0.94077075],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983393,0.00016785719,0.000060317292,0.0002086822,0.0009190993,0.00030465733],"domain_scores_gemma":[0.9921211,0.0011121156,0.00025386378,0.0004729963,0.0027841162,0.0032559275],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0023432116,0.00075595867,0.00076900714,0.001459975,0.0020134172,0.0041567395,0.0016767987,0.0065311757,0.48528948],"category_scores_gemma":[0.010010366,0.00044415123,0.0009891927,0.0005878816,0.00057132274,0.0010653265,0.001803174,0.004800766,0.33092186],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008719912,0.000023279337,0.000098042015,0.000023502633,0.0000018228084,0.000068698086,0.000005439669,0.00001810854,0.00016639903,0.0004576648,0.9923671,0.006682749],"study_design_scores_gemma":[0.000049191814,0.00004950444,0.0009526601,0.000028669916,0.0000046833516,0.00006889641,0.00004519324,0.00010239341,0.0002836931,0.00061236933,0.9977912,0.000011640814],"about_ca_topic_score_codex":0.003514882,"about_ca_topic_score_gemma":0.008929967,"teacher_disagreement_score":0.51471055,"about_ca_system_score_codex":0.0014200521,"about_ca_system_score_gemma":0.0024784647,"threshold_uncertainty_score":0.7341721},"labels":[],"label_agreement":null},{"id":"W4205314691","doi":"10.1038/sj.modpathol.3800883","title":"Infectious Disease","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Royal University Hospital","funders":"","keywords":"Pathology; Medicine; Infectious disease (medical specialty); Disease","score_opus":0.010520083864872427,"score_gpt":0.26955328925630856,"score_spread":0.25903320539143615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205314691","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0066520423,0.0238307,0.00286449,0.011079275,0.00746724,0.0006317276,0.0062206145,0.00056512735,0.9406887],"genre_scores_gemma":[0.13146819,0.056744616,0.010170521,0.02292161,0.010506861,0.00070957845,0.023532523,0.00019528916,0.74375075],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99863213,0.0003308076,0.000111111534,0.00016449856,0.0005116505,0.0002498582],"domain_scores_gemma":[0.99868697,0.00013447851,0.00015376935,0.00021979796,0.0005116527,0.00029326987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013521127,0.0007506719,0.0004364382,0.002027612,0.0008555484,0.00228421,0.00076049054,0.001296954,0.13575114],"category_scores_gemma":[0.0024323876,0.00020040461,0.0005587379,0.0012004136,0.0005821463,0.00075710926,0.0015825054,0.0011506145,0.0510783],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012572466,0.00021688394,0.012108102,0.00073635235,0.00004816273,0.00084696943,0.000345535,0.000087508604,0.0024497,0.015675506,0.59082127,0.37653837],"study_design_scores_gemma":[0.000013912465,0.000067394925,0.009621186,0.00030563644,0.000014792593,0.0010246676,0.00014623371,0.000039124632,0.00027052953,0.0013145711,0.98717564,0.000006155248],"about_ca_topic_score_codex":0.003983668,"about_ca_topic_score_gemma":0.003977061,"teacher_disagreement_score":0.13575114,"about_ca_system_score_codex":0.0009974602,"about_ca_system_score_gemma":0.003035769,"threshold_uncertainty_score":0.4541328},"labels":[],"label_agreement":null},{"id":"W4205887777","doi":"10.1038/modpathol.2012.7","title":"Neuropathology","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Neuropathology; Pathology; Medicine; Biology","score_opus":0.026347088241842318,"score_gpt":0.2814844036036845,"score_spread":0.25513731536184214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205887777","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08536339,0.051921036,0.06968892,0.007926278,0.0042434824,0.0005084662,0.0026492302,0.0037872223,0.77391195],"genre_scores_gemma":[0.4790611,0.038715832,0.045544054,0.005126282,0.002821303,0.00034005308,0.0032995574,0.00077376823,0.42431805],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99978346,0.000023100518,0.00001809475,0.00006096446,0.0000716092,0.00004271795],"domain_scores_gemma":[0.9995442,0.00003605706,0.0000455188,0.00012297064,0.00019051552,0.000060732404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037974023,0.0007302653,0.00027366503,0.0028579498,0.0011206826,0.0014309216,0.00080987933,0.00095231476,0.03613966],"category_scores_gemma":[0.000752271,0.00029460693,0.00042873784,0.0011552024,0.0014495882,0.0012696449,0.001047966,0.0012418778,0.015865808],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003705999,0.00010829763,0.018098962,0.0012020363,0.00016871022,0.023319881,0.0011488565,0.0004251839,0.06205457,0.07322509,0.1157016,0.70417625],"study_design_scores_gemma":[0.000026749216,0.0001451825,0.023237856,0.0006582522,0.000104179235,0.0993726,0.00061495916,0.00046465592,0.01779173,0.035924274,0.82161456,0.000045014058],"about_ca_topic_score_codex":0.0021531896,"about_ca_topic_score_gemma":0.0029845554,"teacher_disagreement_score":0.03613966,"about_ca_system_score_codex":0.0009099594,"about_ca_system_score_gemma":0.0012680413,"threshold_uncertainty_score":0.12089926},"labels":[],"label_agreement":null},{"id":"W4210966348","doi":"10.1038/s41379-022-01009-7","title":"Analysis of separate training and validation radical prostatectomy cohorts identifies 0.25 mm diameter as an optimal definition for “large” cribriform prostatic adenocarcinoma","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Cancer Institute; Canary Foundation; U.S. Department of Defense","keywords":"Cribriform; Prostatectomy; Medicine; Prostate cancer; Urology; Cohort; Biochemical recurrence; Tissue microarray; Hazard ratio; Proportional hazards model; Pathology; Cancer; Internal medicine; Carcinoma; Confidence interval","score_opus":0.04574110610572448,"score_gpt":0.31331528602864817,"score_spread":0.2675741799229237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210966348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990145,0.00006088737,0.0005618652,0.000023875991,0.000008747205,0.00001901767,0.00013839036,0.000014294089,0.0001585496],"genre_scores_gemma":[0.99898344,0.000014416609,0.00024651026,0.000019615058,0.00000849249,0.00001943943,0.0005733645,0.000008223131,0.00012642599],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979055,0.0009229938,0.00010899557,0.00056783797,0.0002383281,0.0002564993],"domain_scores_gemma":[0.9936056,0.0031881558,0.0008220104,0.0013751913,0.00037321105,0.0006357907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0067155235,0.00057825376,0.00063218747,0.00046161443,0.00044651856,0.0010905988,0.00077789254,0.0006393623,0.0010931268],"category_scores_gemma":[0.00941362,0.0003373943,0.0010214433,0.00031016246,0.00076884957,0.000532764,0.000943213,0.0008539603,0.0003246905],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003714979,0.00019782719,0.9831993,0.00001792746,0.0003121199,0.00008307175,0.00029377348,0.00084643613,0.0031984646,0.000063555344,0.0004603453,0.007612231],"study_design_scores_gemma":[0.000076499884,0.00091703003,0.9906859,0.000011534081,0.00021079452,0.0002110989,0.0001753508,0.005681615,0.0015319688,0.00012282784,0.000359599,0.00001568204],"about_ca_topic_score_codex":0.0020654574,"about_ca_topic_score_gemma":0.0029618922,"teacher_disagreement_score":0.0067155235,"about_ca_system_score_codex":0.00032607623,"about_ca_system_score_gemma":0.00074505067,"threshold_uncertainty_score":0.035515487},"labels":[],"label_agreement":null},{"id":"W4211095769","doi":"10.1038/s41379-022-01018-6","title":"Recurrent KRAS mutations are early events in the development of papillary renal neoplasm with reverse polarity","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"","keywords":"KRAS; Pathology; Medicine; Gastroenterology; Internal medicine; Biology; Cancer; Colorectal cancer","score_opus":0.031126326374455494,"score_gpt":0.26125692471545353,"score_spread":0.23013059834099803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211095769","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876039,0.0016968832,0.0018211845,0.00030249447,0.000054513614,0.00003579928,0.00017227021,0.00011373777,0.008199141],"genre_scores_gemma":[0.9983827,0.00036857268,0.00049153244,0.000027625292,0.000027298109,0.000003969032,0.00011495016,0.000009837175,0.00057354703],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997149,0.000032698157,0.00002231514,0.000038534934,0.000118173346,0.00007332584],"domain_scores_gemma":[0.9993223,0.00014712987,0.00023176818,0.0000638278,0.00011389761,0.00012108091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022866295,0.00025665457,0.00027770537,0.0007549447,0.00033826212,0.00066471554,0.00026425323,0.00054787024,0.0024467795],"category_scores_gemma":[0.0011652224,0.00021144257,0.00031860953,0.0004089372,0.00039440222,0.00038428092,0.00027764236,0.00050807535,0.00060415],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021927163,0.00018231444,0.73725307,0.00020146025,0.00011259672,0.062192645,0.0002388893,0.0004169511,0.1317542,0.0018483655,0.0011881797,0.062418632],"study_design_scores_gemma":[0.00004180544,0.000661591,0.75122327,0.000046191384,0.00026279417,0.17454298,0.000647744,0.0022923755,0.05785783,0.0021259782,0.010240323,0.000057107056],"about_ca_topic_score_codex":0.0006756973,"about_ca_topic_score_gemma":0.00093258667,"teacher_disagreement_score":0.0024467795,"about_ca_system_score_codex":0.00030636223,"about_ca_system_score_gemma":0.00060173444,"threshold_uncertainty_score":0.008185267},"labels":[],"label_agreement":null},{"id":"W4211101437","doi":"10.1038/modpathol.2008.211","title":"Cardiovascular","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chemotherapy-induced cardiotoxicity and mitigation","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Queen's University","funders":"","keywords":"Medicine; Pathology","score_opus":0.016542741878908664,"score_gpt":0.25411529755816614,"score_spread":0.23757255567925747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211101437","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0811998,0.041429125,0.027973933,0.011743782,0.009458477,0.00075995666,0.0065135434,0.003441078,0.81748027],"genre_scores_gemma":[0.42234856,0.019502286,0.013895338,0.010616637,0.007278859,0.0006051366,0.0059412057,0.00036284438,0.5194491],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998072,0.00002494595,0.00001198415,0.000050584367,0.00007010712,0.000035152934],"domain_scores_gemma":[0.99963355,0.000034579964,0.000037056518,0.000077454446,0.00012450111,0.000092754766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040807266,0.0004038038,0.0002851591,0.00063425,0.00067277043,0.00076626433,0.00036419387,0.0005899638,0.060080055],"category_scores_gemma":[0.00078775943,0.00011605206,0.00037458737,0.00033301706,0.0002782776,0.00022677617,0.0005065514,0.0013456886,0.01791523],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013693883,0.00053402607,0.0164816,0.00054160453,0.000173619,0.00365799,0.00019602891,0.00025170034,0.04579334,0.012575474,0.18627053,0.7321547],"study_design_scores_gemma":[0.00028732812,0.0014046343,0.08852791,0.00043799815,0.00023786013,0.014369464,0.00014073809,0.0006399218,0.01202373,0.005031784,0.8768365,0.000062159685],"about_ca_topic_score_codex":0.0010879579,"about_ca_topic_score_gemma":0.001668984,"teacher_disagreement_score":0.060080055,"about_ca_system_score_codex":0.00042785428,"about_ca_system_score_gemma":0.00072721933,"threshold_uncertainty_score":0.20098782},"labels":[],"label_agreement":null},{"id":"W4220738029","doi":"10.1038/s41379-022-01023-9","title":"Comprehensive genomic profiling of EWSR1/FUS::CREB translocation-associated tumors uncovers prognostically significant recurrent genetic alterations and methylation-transcriptional correlates","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System","funders":"National Cancer Institute","keywords":"CDKN2A; Biology; Methylation; CDKN2B; Cancer research; Copy number analysis; Chromosomal translocation; Fusion gene; Gene expression profiling; DNA methylation; Breakpoint; Copy-number variation; Genetics; Gene; Gene expression","score_opus":0.02685156929561496,"score_gpt":0.26448532862010443,"score_spread":0.23763375932448946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220738029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967499,0.0005391878,0.0010548166,0.00004913921,0.000004109097,0.000008484855,0.0009341874,0.000044282242,0.000615995],"genre_scores_gemma":[0.9983152,0.00013972762,0.00050733594,0.000016599435,0.0000034815616,0.0000073026686,0.0006490209,0.00000849383,0.0003528632],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99986804,0.000008487204,0.0000063304756,0.000036166603,0.00004057914,0.000040497023],"domain_scores_gemma":[0.99987316,0.000025748799,0.000045287365,0.000014085999,0.000017773405,0.00002388439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012947604,0.00016041957,0.0002152353,0.00076387293,0.00019665442,0.00020964429,0.00013089656,0.00016334862,0.0014259341],"category_scores_gemma":[0.00025714296,0.00010165106,0.00013525665,0.0005286862,0.00019399624,0.00012743662,0.00026323932,0.00019834262,0.00021359205],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004262647,0.000025620604,0.04302668,0.00004869268,0.00004397943,0.00030540998,0.00010711599,0.00024591357,0.9449782,0.0001457543,0.00016915375,0.0104773445],"study_design_scores_gemma":[0.000028669017,0.00039101034,0.796273,0.000011700898,0.00017504401,0.003791959,0.00039712337,0.0020079704,0.19295487,0.00054743397,0.0034057891,0.000015420575],"about_ca_topic_score_codex":0.0007771993,"about_ca_topic_score_gemma":0.0022375751,"teacher_disagreement_score":0.0014259341,"about_ca_system_score_codex":0.00016892861,"about_ca_system_score_gemma":0.00017779547,"threshold_uncertainty_score":0.0047701597},"labels":[],"label_agreement":null},{"id":"W4220777195","doi":"10.1038/s41379-022-01042-6","title":"USCAP 2022 Abstracts: Informatics (977-1017)","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Radiomics and Machine Learning in Medical Imaging","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; University of Alberta; University of Calgary; University of Alberta Hospital; Alberta Hospital Edmonton","funders":"Foundation Medicine","keywords":"Informatics; Medicine; Medical physics; Pathology; Computer science; Engineering","score_opus":0.010515315182583376,"score_gpt":0.2724443975795147,"score_spread":0.26192908239693136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220777195","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00090181734,0.0019478333,0.0043690335,0.0037248675,0.0037292198,0.00025083256,0.07711617,0.018690435,0.8892699],"genre_scores_gemma":[0.0034065384,0.0014196098,0.0025645513,0.0019818593,0.0018873465,0.00028002734,0.064022474,0.0028502624,0.92158747],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999151,0.00013245133,0.00008637312,0.00020521744,0.00033369247,0.000091277965],"domain_scores_gemma":[0.9959698,0.0006496643,0.00023722964,0.0004996579,0.001686183,0.0009575164],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0012484025,0.0018222053,0.0011198919,0.006578725,0.0016325978,0.006818948,0.0019931013,0.002898521,0.8903863],"category_scores_gemma":[0.00474891,0.0008385294,0.00083300046,0.0049130414,0.00066254963,0.0027703412,0.0031875793,0.0015247428,0.8412075],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002355193,0.000027447768,0.000100230056,0.00011163229,0.000004788617,0.000014075508,0.000005006257,0.000055283443,0.00022214603,0.0004375625,0.9529305,0.046067808],"study_design_scores_gemma":[0.000021587879,0.000020945829,0.00061966706,0.000168496,0.000008507192,0.000039227427,0.00001656386,0.00038926076,0.0005062754,0.0012268954,0.99697113,0.00001150335],"about_ca_topic_score_codex":0.0050701606,"about_ca_topic_score_gemma":0.0062493174,"teacher_disagreement_score":0.10961372,"about_ca_system_score_codex":0.0013784926,"about_ca_system_score_gemma":0.0023888054,"threshold_uncertainty_score":0.15635067},"labels":[],"label_agreement":null},{"id":"W4220890145","doi":"10.1038/s41379-022-01072-0","title":"Retraction Note to: Cervical adenosquamous carcinoma: detailed analysis of morphology, immunohistochemical profile, and clinical outcomes in 59 cases","year":2022,"lang":"en","type":"retraction","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":1,"is_retracted":true,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Adenosquamous carcinoma; Medicine; Carcinoma; Pathology; Immunohistochemistry; Basal cell; Surgical pathology; Cervical carcinoma; Adenocarcinoma; Cancer; Cervical cancer; Internal medicine","score_opus":0.051891826778613294,"score_gpt":0.4077621176183812,"score_spread":0.3558702908397679,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220890145","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012770488,0.002754758,0.0003821524,0.12614076,0.86091346,0.000104054445,0.0010910217,0.0001483865,0.0071883756],"genre_scores_gemma":[0.01728749,0.007543919,0.00248822,0.106652305,0.7390378,0.00071857724,0.0028296604,0.0004589741,0.12298308],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99625766,0.00055393577,0.00088028144,0.00030447877,0.0016035009,0.00040009283],"domain_scores_gemma":[0.9739248,0.008657595,0.002073169,0.0014552464,0.0117962845,0.0020928434],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.003857721,0.0014616088,0.0017998308,0.0026299448,0.0018015656,0.00163986,0.0025893778,0.006221021,0.021590862],"category_scores_gemma":[0.061467554,0.0006628885,0.0012575729,0.0017022331,0.001528213,0.0014722687,0.0019253533,0.0087819975,0.016093653],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017806897,0.0000069965417,0.00019326394,0.00009731146,0.00000610084,0.0006865776,0.000030517149,0.000021619931,0.00006439861,0.00016633117,0.9914356,0.0072735087],"study_design_scores_gemma":[0.000045486257,0.00003120863,0.005054285,0.00068775937,0.000042820502,0.004374957,0.00020096927,0.00021900136,0.0003060893,0.000787617,0.9882112,0.000038519873],"about_ca_topic_score_codex":0.005167783,"about_ca_topic_score_gemma":0.0054877703,"teacher_disagreement_score":0.993779,"about_ca_system_score_codex":0.0021401169,"about_ca_system_score_gemma":0.0039338334,"threshold_uncertainty_score":0.07222861},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"other","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":["research_integrity"],"domain":null,"study_design":"not_applicable","genre":"other","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"split"},{"id":"W4220920700","doi":"10.1038/s41379-022-01057-z","title":"Do we need an updated classification of oncocytic renal tumors?","year":2022,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Oncocytoma; Tuberous sclerosis; Chromophobe cell; Pathology; Renal oncocytoma; Eosinophilic; Clear cell; Renal cell carcinoma; Medicine; Angiomyolipoma; Kidney; Internal medicine","score_opus":0.12941027906251815,"score_gpt":0.35501845851954617,"score_spread":0.22560817945702802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220920700","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000112250586,0.9916157,0.00041707643,0.004697232,0.0019843425,0.00000741075,0.000054503264,0.000024317646,0.0010871496],"genre_scores_gemma":[0.0008351999,0.9917305,0.0008929592,0.0035534082,0.0022009783,0.0000100526095,0.00012746305,0.0000064722,0.0006430658],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99943644,0.000108540655,0.00014947202,0.00007543579,0.00017726136,0.000052745905],"domain_scores_gemma":[0.99837387,0.0005507266,0.00022714872,0.00004561856,0.00068366167,0.00011894305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015930717,0.00104281,0.0026100173,0.003815326,0.00040342516,0.0020507358,0.0014451755,0.0012948692,0.0028841456],"category_scores_gemma":[0.0028264793,0.0003145117,0.0010670079,0.003148247,0.0010729097,0.0041152397,0.00084600324,0.003584665,0.0018033131],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004907101,0.000026871956,0.000584194,0.0106588015,0.00011133476,0.00018479988,0.000048548558,0.0002495687,0.000431595,0.003032811,0.104388945,0.8802335],"study_design_scores_gemma":[0.000029737175,0.000052166833,0.0016738254,0.011247803,0.00029837867,0.0019367955,0.00012849174,0.00014790466,0.0001211788,0.003661063,0.9806605,0.000042165928],"about_ca_topic_score_codex":0.0037444902,"about_ca_topic_score_gemma":0.007817009,"teacher_disagreement_score":0.003815326,"about_ca_system_score_codex":0.0013629366,"about_ca_system_score_gemma":0.0030911507,"threshold_uncertainty_score":0.009888828},"labels":[],"label_agreement":null},{"id":"W4221115485","doi":"10.1038/s41379-022-01062-2","title":"p53 null phenotype is a “positive result” in urothelial carcinoma in situ","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Pathology; Carcinoma in situ; Biology; Phenotype; H&E stain; Frameshift mutation; Carcinoma; Immunostaining; Urothelial Cell; Staining; Immunohistochemistry; Cancer; Bladder cancer; Medicine; Genetics; Gene","score_opus":0.019328944973250415,"score_gpt":0.2739760683217456,"score_spread":0.25464712334849515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221115485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877868,0.0011992295,0.0012815738,0.00059821084,0.00017168096,0.000015820886,0.00016899948,0.00008014451,0.008697473],"genre_scores_gemma":[0.9982168,0.00033422696,0.00042104317,0.000097435855,0.000057971636,0.000004773278,0.00010100343,0.000011883267,0.00075486826],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995346,0.00007909826,0.00006120645,0.00008949914,0.00014564153,0.0000899959],"domain_scores_gemma":[0.99914944,0.00024348879,0.00024623895,0.000074648065,0.00013671085,0.0001495048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005087977,0.00048015235,0.00028770533,0.0019286207,0.0005398322,0.0009232602,0.00046408118,0.001115882,0.0036256555],"category_scores_gemma":[0.0022538335,0.00027175556,0.00030201307,0.0008196771,0.001133934,0.00051337824,0.00049555366,0.0005064715,0.00090272696],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025780543,0.0002717818,0.41983303,0.0003417237,0.00012871482,0.10284115,0.00073332153,0.00018908328,0.44100016,0.002291971,0.002588484,0.027202629],"study_design_scores_gemma":[0.000062280655,0.0012845675,0.5248496,0.00008327669,0.0003805287,0.35723442,0.0016941323,0.0008713908,0.10184868,0.0028172613,0.008808263,0.00006558904],"about_ca_topic_score_codex":0.00033382702,"about_ca_topic_score_gemma":0.00039222927,"teacher_disagreement_score":0.0036256555,"about_ca_system_score_codex":0.00017458212,"about_ca_system_score_gemma":0.00021896407,"threshold_uncertainty_score":0.012129068},"labels":[],"label_agreement":null},{"id":"W4224280563","doi":"10.1038/s41379-022-01082-y","title":"Well differentiated papillary mesothelial tumor: a new name and new problems","year":2022,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Mesothelioma; Pathology; Mesothelial Cell; Immunostaining; CDKN2A; Peritoneal mesothelioma; BAP1; Biology; Medicine; Immunohistochemistry; Cancer; Internal medicine","score_opus":0.05769971732755222,"score_gpt":0.2938102310653943,"score_spread":0.23611051373784206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224280563","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006795736,0.9990534,0.00007567776,0.00022900528,0.00018092086,0.0000014828789,0.000012175498,0.0000039403776,0.00037552495],"genre_scores_gemma":[0.00043822383,0.9986865,0.00012018732,0.00020274195,0.00027329565,0.0000014278696,0.000021315498,7.695568e-7,0.00025565538],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997837,0.000033632576,0.000033991208,0.000044618606,0.00008587119,0.000018260098],"domain_scores_gemma":[0.99960643,0.00018449717,0.000056825742,0.000011377316,0.00009947875,0.000041378884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005068325,0.0007797527,0.0015937984,0.003158863,0.00029448085,0.0012671328,0.0008146659,0.0009601031,0.0029589043],"category_scores_gemma":[0.0007377509,0.00024425934,0.00048815252,0.003329951,0.000598003,0.0017659351,0.00075576885,0.0017252892,0.0011359844],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006219567,0.00004603927,0.00033463904,0.015398088,0.00009386593,0.0006049339,0.000073818774,0.00026814046,0.001491755,0.00186669,0.04098848,0.9387714],"study_design_scores_gemma":[0.000022360482,0.00006633936,0.0011639828,0.00456583,0.00022530666,0.00465928,0.00013487655,0.00011500386,0.00025994665,0.0016940018,0.9870624,0.000030781484],"about_ca_topic_score_codex":0.0012101197,"about_ca_topic_score_gemma":0.002782114,"teacher_disagreement_score":0.003158863,"about_ca_system_score_codex":0.0005541523,"about_ca_system_score_gemma":0.0012927646,"threshold_uncertainty_score":0.009898484},"labels":[],"label_agreement":null},{"id":"W4224294628","doi":"10.1038/s41379-022-01075-x","title":"Machine learning for rhabdomyosarcoma histopathology","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Histopathology; Rhabdomyosarcoma; Medicine; Sarcoma; Pathology; Alveolar rhabdomyosarcoma; Differential diagnosis; Soft tissue sarcoma; Cohort","score_opus":0.026906916945931645,"score_gpt":0.27674458970044297,"score_spread":0.24983767275451133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224294628","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.098008,0.023697158,0.85587585,0.0070659933,0.0008074699,0.000187937,0.0017713443,0.0021298497,0.010456369],"genre_scores_gemma":[0.76962113,0.006934497,0.2103712,0.00068784103,0.001073422,0.00021430291,0.0024064078,0.00013477249,0.008556407],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99931383,0.00028306068,0.00005763877,0.000116278716,0.00018197787,0.000047193073],"domain_scores_gemma":[0.9975242,0.0015734948,0.00018374661,0.00022813852,0.0004248679,0.000065519744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021582956,0.00041302427,0.0006617129,0.0014008183,0.0003629413,0.0010578184,0.0007660058,0.0006615928,0.0019110381],"category_scores_gemma":[0.0049210577,0.00019181371,0.0006928028,0.0007469431,0.00037458917,0.00081556104,0.00073661486,0.0012704217,0.001006275],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105420106,0.00015080426,0.013609676,0.0003304594,0.00020354296,0.000111793124,0.00005209499,0.08501078,0.0032262139,0.009149848,0.012812216,0.8752372],"study_design_scores_gemma":[0.000015481826,0.00013348542,0.0062159006,0.00016661333,0.000067776265,0.0003942457,0.000057192014,0.9260227,0.0040014363,0.048504025,0.01439172,0.00002945756],"about_ca_topic_score_codex":0.0013177295,"about_ca_topic_score_gemma":0.0016544415,"teacher_disagreement_score":0.0021582956,"about_ca_system_score_codex":0.0005924228,"about_ca_system_score_gemma":0.0007685917,"threshold_uncertainty_score":0.0114142895},"labels":[],"label_agreement":null},{"id":"W4224299008","doi":"10.1038/s41379-022-01079-7","title":"HPV-independent, p53-wild-type vulvar intraepithelial neoplasia: a review of nomenclature and the journey to characterize verruciform and acanthotic precursor lesions of the vulva","year":2022,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Vulvar intraepithelial neoplasia; Vulva; HRAS; Squamous intraepithelial lesion; Pathology; Intraepithelial neoplasia; Acanthosis; Biology; Koilocyte; Dermatology; Medicine; Cervical intraepithelial neoplasia; KRAS; Cancer; Internal medicine; Cervical cancer; Prostate; Hyperkeratosis","score_opus":0.059161496146359904,"score_gpt":0.3327153465032772,"score_spread":0.2735538503569173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224299008","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004884733,0.9993961,0.00005061804,0.00010937815,0.00011204387,0.0000020842372,0.000011869359,0.0000026771809,0.00026635386],"genre_scores_gemma":[0.00023596449,0.9992539,0.00012793088,0.00013681776,0.00009625137,0.0000021383175,0.000018822751,7.808907e-7,0.00012737539],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999645,0.00006152674,0.00008598595,0.00006814801,0.00011412263,0.000025180547],"domain_scores_gemma":[0.99938,0.0003132361,0.00010422952,0.00001625978,0.00014570012,0.000040534702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008812274,0.0009839527,0.0019844065,0.0058170804,0.0003565982,0.0015759593,0.001076574,0.0009476163,0.002500337],"category_scores_gemma":[0.0011794363,0.0003398021,0.00058011134,0.005669403,0.000847181,0.002396243,0.00088140706,0.0017140516,0.001288194],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007518844,0.00004697927,0.00039268468,0.03582824,0.00010914854,0.00035789213,0.00016683864,0.0002383339,0.0016934278,0.0035435716,0.03422075,0.9233269],"study_design_scores_gemma":[0.000013695084,0.00008772894,0.0014781576,0.014995097,0.00022396026,0.0032487756,0.00019069629,0.00007182215,0.0002595107,0.001727651,0.97766954,0.00003333132],"about_ca_topic_score_codex":0.0022124345,"about_ca_topic_score_gemma":0.0045257392,"teacher_disagreement_score":0.0058170804,"about_ca_system_score_codex":0.0008836333,"about_ca_system_score_gemma":0.001985031,"threshold_uncertainty_score":0.008364439},"labels":[],"label_agreement":null},{"id":"W4229958655","doi":"10.1038/s41379-020-0475-6","title":"Abstracts from USCAP 2020: Hematopathology (1316-1502)","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Hematological disorders and diagnostics","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Bible College; University of Calgary","funders":"Leidos; AstraZeneca","keywords":"Hematopathology; Pathology; Medicine; Medical physics; Computer science; Biology","score_opus":0.03122907045186905,"score_gpt":0.2692493858842068,"score_spread":0.2380203154323378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229958655","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011987101,0.009873447,0.0010239127,0.014217789,0.03374053,0.0005502853,0.02483541,0.0024008942,0.91215897],"genre_scores_gemma":[0.0022687095,0.0037299416,0.0005239756,0.0048531857,0.013387582,0.00013162266,0.011875869,0.000391936,0.96283716],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99918693,0.000097756085,0.00007519017,0.000108919055,0.00040660604,0.0001245415],"domain_scores_gemma":[0.9944878,0.00060986826,0.0003055057,0.00023614858,0.0022619024,0.0020988502],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001264012,0.0014547631,0.00091553916,0.0041115046,0.0010926734,0.0041926987,0.0013469748,0.0036088906,0.8181618],"category_scores_gemma":[0.0034308967,0.0006702148,0.0011517303,0.001713311,0.00045198787,0.0012164332,0.002444611,0.002231324,0.69587994],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006620556,0.000050408726,0.0000972425,0.0001308255,0.000005402327,0.000058355814,0.000002185591,0.000039385068,0.00028525636,0.00017747984,0.96563274,0.033454515],"study_design_scores_gemma":[0.000068955844,0.000051964595,0.0011275819,0.00023025298,0.000011279578,0.00014646367,0.000008998817,0.000115509916,0.0003121982,0.0005054242,0.99741167,0.000009680136],"about_ca_topic_score_codex":0.0031331093,"about_ca_topic_score_gemma":0.006126589,"teacher_disagreement_score":0.8181618,"about_ca_system_score_codex":0.0015109393,"about_ca_system_score_gemma":0.002573191,"threshold_uncertainty_score":0.25937015},"labels":[],"label_agreement":null},{"id":"W4230038397","doi":"10.1038/modpathol.2012.14","title":"Dermatopathology","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Dermatopathology; Pathology; Medicine; Dermatology","score_opus":0.019281041414435898,"score_gpt":0.26520208183821714,"score_spread":0.24592104042378124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230038397","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015563935,0.017775062,0.008726856,0.007368824,0.0038365365,0.00015470365,0.0005652059,0.0011184253,0.94489044],"genre_scores_gemma":[0.1139126,0.01298365,0.009046604,0.0049579786,0.0039354167,0.00007651541,0.00077068066,0.00030271668,0.8540138],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997719,0.000036530408,0.000017844857,0.00004468195,0.00009034734,0.000038635826],"domain_scores_gemma":[0.9995944,0.000046353303,0.000033174667,0.00010825459,0.00012993277,0.00008800171],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028923256,0.00044398342,0.00019875247,0.001885392,0.0009576889,0.0013276341,0.00047778437,0.00096203055,0.1744468],"category_scores_gemma":[0.0008183616,0.00021877394,0.00028761156,0.00087631476,0.00065935566,0.0008945906,0.0010252706,0.0012612368,0.06222096],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011739664,0.00012608652,0.007036614,0.00053631584,0.00003261834,0.019513661,0.0003252129,0.00014593369,0.021489717,0.027218204,0.33356497,0.5898933],"study_design_scores_gemma":[0.000008038562,0.000019618885,0.0034275956,0.00015846417,0.000009804228,0.0582533,0.000097352866,0.00009765861,0.002016199,0.0039961976,0.9319096,0.0000061591895],"about_ca_topic_score_codex":0.00044437847,"about_ca_topic_score_gemma":0.0011956847,"teacher_disagreement_score":0.1744468,"about_ca_system_score_codex":0.00051400624,"about_ca_system_score_gemma":0.00049416965,"threshold_uncertainty_score":0.5835827},"labels":[],"label_agreement":null},{"id":"W4230092146","doi":"10.1038/s41379-021-00752-7","title":"Abstracts from USCAP 2021: Breast Pathology (66-147)","year":2021,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton General Hospital; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Pathology; Medicine; Hematopathology; Anatomical pathology; Cytopathology; Biology; Immunohistochemistry; Cytology; Cytogenetics","score_opus":0.01621053480343204,"score_gpt":0.24511464802727487,"score_spread":0.22890411322384283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230092146","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020671135,0.01621108,0.0015269276,0.023995986,0.051296588,0.0010346628,0.08578765,0.003989899,0.81409013],"genre_scores_gemma":[0.003163456,0.0076947967,0.0007952882,0.0052485717,0.022569822,0.00023155885,0.037247792,0.00063754496,0.92241114],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988117,0.0001811889,0.00012665114,0.0001143372,0.0006003953,0.00016568956],"domain_scores_gemma":[0.99069244,0.00094151264,0.00053404376,0.00036571865,0.005015925,0.0024503917],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015618041,0.0018266706,0.001178081,0.006714649,0.0010929523,0.0040652077,0.0015817877,0.0034274275,0.72800773],"category_scores_gemma":[0.0047675734,0.0007608373,0.00121526,0.0027869456,0.00036754628,0.0010937892,0.002203956,0.0018483961,0.60282797],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058177964,0.000039117025,0.00011277307,0.0001676885,0.000004111047,0.00003849754,0.0000023646649,0.000034482684,0.00018828119,0.000073187635,0.97959065,0.019690575],"study_design_scores_gemma":[0.000055815493,0.00007233388,0.0026871683,0.00043532293,0.000013401992,0.00016079393,0.000014145919,0.00013742041,0.0002801524,0.0003700467,0.9957594,0.000013982714],"about_ca_topic_score_codex":0.0051219547,"about_ca_topic_score_gemma":0.0123342,"teacher_disagreement_score":0.72800773,"about_ca_system_score_codex":0.0015840454,"about_ca_system_score_gemma":0.0027735573,"threshold_uncertainty_score":0.38796395},"labels":[],"label_agreement":null},{"id":"W4230721644","doi":"10.1038/modpathol.2014.9","title":"Cytopathology","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Cytopathology; Pathology; Medicine; Hematopathology; Biology; Cytology","score_opus":0.02499751832411666,"score_gpt":0.3239908146563677,"score_spread":0.298993296332251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230721644","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08688598,0.042754788,0.098198816,0.012240985,0.0066212337,0.003923786,0.0081033185,0.008421102,0.73285],"genre_scores_gemma":[0.3472925,0.024629053,0.13621485,0.01633203,0.0043632733,0.0024021291,0.01276672,0.002206329,0.45379305],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984875,0.00027114895,0.00017434449,0.00032154104,0.00058286334,0.0001625922],"domain_scores_gemma":[0.9972144,0.00042093173,0.0001590721,0.00078123796,0.001174045,0.00025037274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017389902,0.00079385925,0.0005100724,0.007577427,0.0017753282,0.002054246,0.0013411837,0.0016516667,0.086687796],"category_scores_gemma":[0.003947746,0.00062504783,0.00091942755,0.0021721604,0.0014249573,0.001181507,0.0019257034,0.0019463855,0.0387826],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006492021,0.00031745445,0.061481595,0.0021328581,0.00015847213,0.016195137,0.001547624,0.0002740763,0.20442757,0.02374818,0.13446891,0.5545988],"study_design_scores_gemma":[0.00006393484,0.00020199419,0.02555494,0.00095657236,0.0000977411,0.04896836,0.00063256425,0.0006266339,0.05418515,0.007329383,0.861326,0.000056784513],"about_ca_topic_score_codex":0.0009374508,"about_ca_topic_score_gemma":0.001512684,"teacher_disagreement_score":0.086687796,"about_ca_system_score_codex":0.0007494179,"about_ca_system_score_gemma":0.0018194165,"threshold_uncertainty_score":0.2899996},"labels":[],"label_agreement":null},{"id":"W4231214847","doi":"10.1038/s41379-019-0244-6","title":"Abstracts from USCAP 2019: Pulmonary Pathology (1803-1896)","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Medical History and Innovations","field":"Arts and Humanities","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut Universitaire de Cardiologie et de Pneumologie de Québec; Université Laval; University of Alberta","funders":"BC Cancer Agency; Bristol-Myers Squibb","keywords":"Pathology; Pulmonary pathology; Medicine; Anatomical pathology; Immunohistochemistry","score_opus":0.026639319880034696,"score_gpt":0.2195938512150134,"score_spread":0.1929545313349787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231214847","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0030292054,0.027129335,0.0021489288,0.026488587,0.042797904,0.0008727432,0.038139015,0.0028809246,0.85651326],"genre_scores_gemma":[0.004724555,0.010208085,0.001157521,0.005452251,0.017706305,0.00023243259,0.019940034,0.0005916571,0.9399872],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99901724,0.00013787198,0.000115708324,0.00017105785,0.00044708405,0.00011104736],"domain_scores_gemma":[0.9948895,0.00050539157,0.000305463,0.0002309488,0.0023004243,0.001768224],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0016152152,0.0012800583,0.00092130416,0.0039743683,0.00096236565,0.0036502888,0.001333732,0.0028897198,0.7090782],"category_scores_gemma":[0.00288832,0.00047208002,0.00071028376,0.001897964,0.00059120526,0.0013364658,0.0023598997,0.0020249123,0.582879],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001298144,0.0000733578,0.0002650566,0.00028873957,0.000009947667,0.00016201302,0.00000977111,0.00006077343,0.0009465524,0.0004038057,0.9136513,0.08399876],"study_design_scores_gemma":[0.000035371067,0.000048901533,0.0015012631,0.0002936065,0.000006572301,0.00023031159,0.000011850242,0.00008422981,0.00032639332,0.00037130513,0.9970806,0.00000953314],"about_ca_topic_score_codex":0.0024946313,"about_ca_topic_score_gemma":0.0051334733,"teacher_disagreement_score":0.2909218,"about_ca_system_score_codex":0.0016995667,"about_ca_system_score_gemma":0.0022628834,"threshold_uncertainty_score":0.41496462},"labels":[],"label_agreement":null},{"id":"W4231288347","doi":"10.1038/modpathol.2010.22","title":"Liver &amp; Pancreas","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Pathology; Pancreas; Medicine; Internal medicine","score_opus":0.01985409531214157,"score_gpt":0.27341397048741756,"score_spread":0.253559875175276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231288347","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42631122,0.103106886,0.017960237,0.014270436,0.003161334,0.00044848007,0.005051985,0.0025754217,0.42711404],"genre_scores_gemma":[0.83845073,0.019458184,0.00878179,0.004768801,0.0021392084,0.00017810246,0.0021834008,0.00030312143,0.12373657],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9998442,0.000025948611,0.000015988731,0.000039755272,0.000032561908,0.000041614203],"domain_scores_gemma":[0.99963605,0.000062439154,0.00008931397,0.00005304461,0.00003963495,0.0001195381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020091084,0.0006159739,0.00055947807,0.00075822556,0.00061265443,0.0009581954,0.00029775058,0.0005272507,0.051280957],"category_scores_gemma":[0.00069555384,0.00018605025,0.00038589526,0.0007313601,0.00044771217,0.0007729849,0.0007130053,0.0011577482,0.01703175],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016015528,0.0004743527,0.08197722,0.0017521193,0.0002337817,0.067946434,0.0001334185,0.0005676793,0.020391377,0.003468784,0.027956443,0.79349685],"study_design_scores_gemma":[0.00018578618,0.0011079352,0.15006576,0.0008619758,0.00017314633,0.5600184,0.00033808165,0.0009398325,0.011955458,0.0055133663,0.26878887,0.00005126833],"about_ca_topic_score_codex":0.00042294755,"about_ca_topic_score_gemma":0.0006449896,"teacher_disagreement_score":0.051280957,"about_ca_system_score_codex":0.0005086336,"about_ca_system_score_gemma":0.0004090027,"threshold_uncertainty_score":0.17155188},"labels":[],"label_agreement":null},{"id":"W4231330910","doi":"10.1038/modpathol.2008.212","title":"Cytopathology","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Connective tissue disorders research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute on Governance","funders":"","keywords":"Medicine; Marfan syndrome; Aortic dissection; Ascending aorta; Histopathology; Pathology; Dissection (medical); Connective tissue; Aorta; Thoracic aorta; Radiology; Internal medicine","score_opus":0.013182939504263405,"score_gpt":0.29529639467958024,"score_spread":0.28211345517531683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231330910","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12953664,0.074546024,0.054420922,0.013356567,0.008584225,0.0016052668,0.005441665,0.0036423749,0.7088663],"genre_scores_gemma":[0.6575187,0.0343817,0.027216291,0.011348211,0.0053028963,0.0008196311,0.0053515662,0.0008254877,0.25723565],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993412,0.00011748777,0.000057431233,0.0001573765,0.00023163689,0.000094911586],"domain_scores_gemma":[0.9986437,0.00023253328,0.00013760728,0.00038813893,0.00044212086,0.00015588412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007748935,0.0006518165,0.0003881525,0.0047263997,0.0013227679,0.0018781037,0.0009062868,0.0013930764,0.042434003],"category_scores_gemma":[0.0021831589,0.00030900078,0.00052134943,0.0014434782,0.0018568257,0.0012511356,0.0013930072,0.0017571637,0.0168411],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009586385,0.0002516962,0.060990494,0.0016225014,0.00011900064,0.043915533,0.001735904,0.00041497688,0.19672096,0.10085351,0.111885734,0.48053107],"study_design_scores_gemma":[0.000066085275,0.00017668311,0.022538673,0.0006818575,0.000089739704,0.10744732,0.000664255,0.0005018387,0.042991143,0.020755367,0.8040397,0.000047318914],"about_ca_topic_score_codex":0.0009791576,"about_ca_topic_score_gemma":0.00079470314,"teacher_disagreement_score":0.042434003,"about_ca_system_score_codex":0.00097124296,"about_ca_system_score_gemma":0.0010647441,"threshold_uncertainty_score":0.14195591},"labels":[],"label_agreement":null},{"id":"W4231768896","doi":"10.1038/s41379-019-0237-5","title":"Abstracts from USCAP 2019: Genitourinary Pathology (including renal tumors) (776-992)","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Pathology; Genitourinary system; Medicine; Renal pathology; Kidney; Internal medicine","score_opus":0.009853856785976608,"score_gpt":0.2351711905712151,"score_spread":0.2253173337852385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231768896","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033371514,0.028101414,0.0013093917,0.036137685,0.058506463,0.0010537937,0.11456733,0.0026971947,0.75428957],"genre_scores_gemma":[0.006782763,0.014247876,0.0010186689,0.010165707,0.030680552,0.00031368205,0.07091779,0.00065928424,0.86521363],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99935037,0.00008751545,0.000089725494,0.00009263012,0.00027097517,0.000108751374],"domain_scores_gemma":[0.9958106,0.00037431958,0.00025464463,0.00014809625,0.0017353756,0.0016769338],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0011027182,0.0012075849,0.00082621357,0.004332234,0.0010927223,0.0031164715,0.0011762964,0.0026991447,0.60620564],"category_scores_gemma":[0.0024314101,0.00045833754,0.00087022973,0.0026610317,0.00035835826,0.0011063216,0.0019176404,0.0016098061,0.46482718],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006514885,0.000033277796,0.00020772616,0.000250518,0.00000661689,0.00012110415,0.0000046396076,0.000036487632,0.00032117186,0.0001371633,0.96768826,0.031127894],"study_design_scores_gemma":[0.00003908095,0.00003788838,0.0023248307,0.00036271548,0.0000115375105,0.00022766921,0.000013420044,0.000061922474,0.00024534695,0.00028716726,0.9963792,0.00000922106],"about_ca_topic_score_codex":0.004948256,"about_ca_topic_score_gemma":0.009915101,"teacher_disagreement_score":0.39379436,"about_ca_system_score_codex":0.0013158395,"about_ca_system_score_gemma":0.0026065786,"threshold_uncertainty_score":0.56169987},"labels":[],"label_agreement":null},{"id":"W4232330966","doi":"10.1038/sj.modpathol.3801047","title":"Quality Assurance","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Royal Columbian Hospital; Vancouver General Hospital","funders":"","keywords":"Quality assurance; Medical physics; Medicine; Pathology; External quality assessment","score_opus":0.07106120806468168,"score_gpt":0.36147869474288274,"score_spread":0.29041748667820105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232330966","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029930433,0.0039396123,0.72398335,0.0128300525,0.0023535606,0.015531143,0.0075283353,0.01270704,0.19119655],"genre_scores_gemma":[0.2629089,0.002513231,0.5630373,0.0076900176,0.0013898149,0.009139004,0.019485371,0.0032250157,0.13061136],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9069634,0.02903062,0.010500169,0.0102187665,0.040152382,0.0031346204],"domain_scores_gemma":[0.7250417,0.03378134,0.013493208,0.059075292,0.16414127,0.0044672797],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.076988414,0.00094328617,0.0008394479,0.0057588755,0.0028237768,0.008963541,0.0032318027,0.0016343716,0.044745386],"category_scores_gemma":[0.11658917,0.0009174288,0.00096069975,0.004845775,0.0021283217,0.003290819,0.0043847337,0.002173796,0.017728152],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065965496,0.0005265981,0.023139358,0.0015645543,0.00013870261,0.00028982857,0.003671342,0.0019636112,0.017200511,0.04599356,0.121369176,0.7834831],"study_design_scores_gemma":[0.00019522838,0.00063223904,0.02520522,0.0009547453,0.00012462104,0.00102174,0.0012421625,0.0068474286,0.035982106,0.01430852,0.9133677,0.00011833534],"about_ca_topic_score_codex":0.00804869,"about_ca_topic_score_gemma":0.0051897424,"teacher_disagreement_score":0.9552546,"about_ca_system_score_codex":0.006017994,"about_ca_system_score_gemma":0.01986936,"threshold_uncertainty_score":0.4071585},"labels":[],"label_agreement":null},{"id":"W4233069976","doi":"10.1038/modpathol.3800213","title":"Erratum: The presence of stromal mast cells identifies a subset of invasive breast cancers with a favorable prognosis","year":2004,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Kruppel-like factors research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Michael Smith Health Research BC","keywords":"Spelling; Stromal cell; Pathology; Medicine; Mast (botany); Library science; Mast cell; Computer science; Philosophy; Linguistics; Immunology","score_opus":0.012506133733238995,"score_gpt":0.24619009368207145,"score_spread":0.23368395994883245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233069976","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017551756,0.006174979,0.000719543,0.07095287,0.9144293,0.000045823053,0.00069090724,0.0002323326,0.0049990364],"genre_scores_gemma":[0.0434157,0.031602673,0.010050004,0.177089,0.4476744,0.0002396942,0.0038715152,0.0009873408,0.28506973],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99873525,0.00015527151,0.0003139273,0.00014770697,0.0005025925,0.00014528958],"domain_scores_gemma":[0.99262846,0.0018199262,0.00062176,0.0005741885,0.0037277206,0.00062793616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001542664,0.0019543867,0.0016869145,0.0033158374,0.001809081,0.0014719715,0.0024694966,0.0063207047,0.01581252],"category_scores_gemma":[0.014592044,0.001072994,0.0013222641,0.0014097736,0.0012816564,0.0013484342,0.0007230251,0.005916476,0.012675],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023711268,0.000035570378,0.00073148066,0.00033903317,0.000050076716,0.003978689,0.00003261834,0.000110000845,0.00065581047,0.00040675118,0.97765356,0.015769344],"study_design_scores_gemma":[0.00012338847,0.00013934038,0.006144882,0.00036292322,0.00023060643,0.0106169535,0.00011261626,0.00041059576,0.0025979546,0.0006957919,0.9784954,0.00006950709],"about_ca_topic_score_codex":0.0055171433,"about_ca_topic_score_gemma":0.006592641,"teacher_disagreement_score":0.01581252,"about_ca_system_score_codex":0.0020982288,"about_ca_system_score_gemma":0.0020434035,"threshold_uncertainty_score":0.05289811},"labels":[],"label_agreement":null},{"id":"W4233201458","doi":"10.1038/modpathol.2014.28","title":"Quality Assurance","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Medicine; MALT lymphoma; Pathology; KRAS; Adenocarcinoma; Lymphoma; Mucosa-associated lymphoid tissue; Lung; Lymphoproliferative disorders; Internal medicine; Cancer; Colorectal cancer","score_opus":0.026698776825020417,"score_gpt":0.31164243357591714,"score_spread":0.2849436567508967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233201458","genre_codex":"methods","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03145435,0.004170176,0.6482815,0.016917054,0.002661945,0.01648779,0.009960332,0.013203143,0.25686374],"genre_scores_gemma":[0.30798015,0.0025390557,0.5056537,0.010058271,0.0014688228,0.010672886,0.023448054,0.00339427,0.13478483],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.8976749,0.03364004,0.010855475,0.010953698,0.043449264,0.0034267264],"domain_scores_gemma":[0.6891728,0.039227005,0.0153240105,0.059479136,0.19160879,0.0051882463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.08485093,0.00084489275,0.0008139721,0.0054863626,0.0025686657,0.009123818,0.0030877509,0.00162277,0.047733203],"category_scores_gemma":[0.13251373,0.00086370244,0.000961906,0.0048256256,0.0021108857,0.0032965748,0.004218177,0.0022130166,0.016819922],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067867426,0.0005617469,0.02582461,0.001806134,0.00016401442,0.00022674432,0.0034984318,0.0023672094,0.01114442,0.053761743,0.14466585,0.7553004],"study_design_scores_gemma":[0.00021083515,0.00059631065,0.030051086,0.001085228,0.000114048766,0.00067004235,0.0011059288,0.007116786,0.020788822,0.015106363,0.9230387,0.000115903225],"about_ca_topic_score_codex":0.010666681,"about_ca_topic_score_gemma":0.006616054,"teacher_disagreement_score":0.08485093,"about_ca_system_score_codex":0.0073488625,"about_ca_system_score_gemma":0.024722608,"threshold_uncertainty_score":0.44873995},"labels":[],"label_agreement":null},{"id":"W4233509539","doi":"10.1038/modpathol.2018.16","title":"USCAP 2018 Abstracts: Kidney/Renal Pathology (1674–1718)","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Pediatric Urology and Nephrology Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; Dalhousie University; University of Alberta","funders":"","keywords":"Pathology; Renal pathology; Kidney; Medicine; Internal medicine","score_opus":0.02024529631268309,"score_gpt":0.27227385887960864,"score_spread":0.2520285625669256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233509539","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022737852,0.01291711,0.0010811553,0.015201441,0.054711,0.0005401767,0.01791238,0.0018431259,0.8935198],"genre_scores_gemma":[0.0058521302,0.009536969,0.00078292005,0.0043418766,0.03317435,0.0002213163,0.012078264,0.0007099375,0.9333022],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99893886,0.000112785965,0.00019988521,0.00017835472,0.0004021226,0.00016788833],"domain_scores_gemma":[0.9922052,0.00069200486,0.0006130905,0.00035829665,0.003451553,0.0026799233],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0015885956,0.0015073796,0.001230788,0.0073324526,0.0019862026,0.006691555,0.001452394,0.003887657,0.7847721],"category_scores_gemma":[0.0048048957,0.0009723345,0.0014169128,0.0035985317,0.0009611946,0.0029992913,0.003354963,0.002613495,0.63031596],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009626031,0.00007984469,0.0006219554,0.0005832194,0.000016079059,0.0002646024,0.000009855034,0.00009392835,0.0004700731,0.00065667403,0.91357696,0.083530605],"study_design_scores_gemma":[0.000031510535,0.000040467392,0.0021032444,0.00071256957,0.000012755616,0.00051730993,0.000028038294,0.00010978985,0.0003230435,0.0006401821,0.99546707,0.000014043119],"about_ca_topic_score_codex":0.002095102,"about_ca_topic_score_gemma":0.0033388184,"teacher_disagreement_score":0.2152279,"about_ca_system_score_codex":0.0019001729,"about_ca_system_score_gemma":0.003314366,"threshold_uncertainty_score":0.30699646},"labels":[],"label_agreement":null},{"id":"W4234046917","doi":"10.1038/s41379-019-0241-9","title":"Abstracts from USCAP 2019: Medical Renal Pathology (including transplantation) (1581-1620)","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pathology; Medicine; Renal pathology; Transplantation; Anatomical pathology; Kidney; Immunohistochemistry; Internal medicine","score_opus":0.016622319385465874,"score_gpt":0.28021655030711556,"score_spread":0.2635942309216497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234046917","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017956762,0.036596544,0.00094028754,0.05244029,0.16218969,0.0010133178,0.10982499,0.0022859373,0.63291323],"genre_scores_gemma":[0.0047425586,0.018145788,0.00080282317,0.017379796,0.08818106,0.0004588643,0.057949163,0.0006037752,0.8117362],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985631,0.00016887518,0.0001762934,0.00012343406,0.00078119047,0.00018706206],"domain_scores_gemma":[0.988926,0.0010635493,0.0008352712,0.00025427245,0.005750601,0.0031702882],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0018331576,0.0017044985,0.0014017974,0.006763396,0.0013472263,0.004932272,0.0012931032,0.0039264215,0.58723027],"category_scores_gemma":[0.0061634136,0.0006796936,0.0012836838,0.00385874,0.0004268727,0.0014441713,0.0025860292,0.00247567,0.42300463],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004180737,0.000019873703,0.000079929334,0.00015286318,0.0000035591852,0.000025833351,0.000001633204,0.000021086318,0.00006780022,0.000058860984,0.9892225,0.010304155],"study_design_scores_gemma":[0.000073269526,0.000039655148,0.002940234,0.000618118,0.000014834591,0.0000938296,0.000015850077,0.00009898554,0.0001403925,0.0003394336,0.9956109,0.000014539799],"about_ca_topic_score_codex":0.008047765,"about_ca_topic_score_gemma":0.0167269,"teacher_disagreement_score":0.41276973,"about_ca_system_score_codex":0.002196512,"about_ca_system_score_gemma":0.004953588,"threshold_uncertainty_score":0.5887659},"labels":[],"label_agreement":null},{"id":"W4234957670","doi":"10.1038/modpathol.2016.247","title":"Education","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University Health Network","funders":"","keywords":"Pathology; Medicine","score_opus":0.034856152978927586,"score_gpt":0.34072880710277925,"score_spread":0.3058726541238517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234957670","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017750093,0.0021115658,0.0014882076,0.030412886,0.01154185,0.00026640948,0.0052874223,0.0018121513,0.9453046],"genre_scores_gemma":[0.00600043,0.0014674888,0.00085178,0.0063921167,0.0015858373,0.00010246985,0.0023890561,0.00028427117,0.9809265],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999201,0.00011387542,0.00005320945,0.00014678283,0.0003141357,0.00017105865],"domain_scores_gemma":[0.99758637,0.00029567425,0.00013216877,0.00021987382,0.0008820841,0.0008838659],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00079312344,0.00087110995,0.00057919533,0.0011489453,0.0012285911,0.003540878,0.0013883514,0.0022951118,0.847247],"category_scores_gemma":[0.0046549398,0.00022895027,0.0004406804,0.0009781679,0.0005049743,0.0022305534,0.0027128302,0.0016364892,0.6716139],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047084657,0.00008040979,0.00045964195,0.0001968315,0.0000027822118,0.00014235717,0.00010330464,0.000047712332,0.00020067365,0.0037267464,0.8315905,0.16340198],"study_design_scores_gemma":[0.000008286727,0.000019331563,0.00041933262,0.00010418103,0.0000013195413,0.00013527955,0.000080305275,0.000033308363,0.000071358336,0.00088872795,0.9982352,0.0000033332237],"about_ca_topic_score_codex":0.0016376629,"about_ca_topic_score_gemma":0.0024651063,"teacher_disagreement_score":0.152753,"about_ca_system_score_codex":0.0010568761,"about_ca_system_score_gemma":0.0027263097,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4235204031","doi":"10.1038/modpathol.2008.228","title":"Pediatrics","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Teratomas and Epidermoid Cysts","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Pathology","score_opus":0.013380778974883826,"score_gpt":0.2730398675438121,"score_spread":0.2596590885689283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235204031","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0042264536,0.007702858,0.0013944517,0.0073130657,0.0070404224,0.00008101254,0.0007094457,0.00056573376,0.97096664],"genre_scores_gemma":[0.023389978,0.008500316,0.001773158,0.0031854445,0.0023488353,0.00005817538,0.00065566885,0.00019158983,0.9598968],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997547,0.000030197241,0.0000126087725,0.00005043514,0.000103576036,0.000048458474],"domain_scores_gemma":[0.999388,0.00005490689,0.000032220705,0.000054660915,0.00019069659,0.0002795351],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023342455,0.0006287405,0.0003124436,0.0011263571,0.001343419,0.0011339885,0.0004880762,0.0009715168,0.3916466],"category_scores_gemma":[0.0011726092,0.00022369048,0.00025833133,0.0007842925,0.00044020597,0.0007674704,0.0013838019,0.0016967538,0.1834967],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004793948,0.00014201128,0.0031419925,0.00013138507,0.000009552183,0.0054507656,0.000109749424,0.00007732249,0.0015012954,0.012028957,0.6882271,0.28913188],"study_design_scores_gemma":[0.000008745135,0.000023186394,0.0019399406,0.000104080435,0.0000044198655,0.0071933093,0.000059040107,0.000030768024,0.00031918366,0.0015979842,0.98871523,0.000004089657],"about_ca_topic_score_codex":0.0010170208,"about_ca_topic_score_gemma":0.0032515917,"teacher_disagreement_score":0.6083534,"about_ca_system_score_codex":0.00064085267,"about_ca_system_score_gemma":0.0011413553,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4235530849","doi":"10.1038/sj.modpathol.3801030","title":"Cytopathology","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Ottawa","funders":"","keywords":"Cytopathology; Pathology; Medicine; Hematopathology; Cytology; Biology","score_opus":0.06667513918098893,"score_gpt":0.33524573593552964,"score_spread":0.2685705967545407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235530849","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.084921084,0.046649028,0.09380408,0.01219858,0.0065455595,0.0032992975,0.007026265,0.008065897,0.7374902],"genre_scores_gemma":[0.3372324,0.026060147,0.12663986,0.01462787,0.0041275118,0.0020359354,0.011257736,0.0020146163,0.47600394],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986438,0.00023641669,0.00015400295,0.00029867608,0.0005203745,0.00014673918],"domain_scores_gemma":[0.9974808,0.0003726689,0.00013974203,0.0007587445,0.0010187234,0.00022937862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016362462,0.0007625133,0.00050605,0.007247021,0.0018447926,0.0020349903,0.0013025637,0.0016539453,0.08807765],"category_scores_gemma":[0.0034890682,0.00064575236,0.0008906107,0.0021327112,0.001451901,0.0012259259,0.0019019037,0.0019510299,0.03925875],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006444433,0.00030538786,0.053385265,0.0019152084,0.00015047523,0.01436801,0.0014098083,0.00024425716,0.2163626,0.025711188,0.13287783,0.5526255],"study_design_scores_gemma":[0.00006166973,0.00019354353,0.02339218,0.0007797472,0.00009111727,0.0497944,0.0005523286,0.00057012093,0.056030724,0.0072976174,0.86118346,0.000053112668],"about_ca_topic_score_codex":0.0008401597,"about_ca_topic_score_gemma":0.0014233054,"teacher_disagreement_score":0.08807765,"about_ca_system_score_codex":0.0007460969,"about_ca_system_score_gemma":0.0016854818,"threshold_uncertainty_score":0.29464906},"labels":[],"label_agreement":null},{"id":"W4235597831","doi":"10.1038/s41379-019-0450-2","title":"Correction to: Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning","year":2020,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute for Health and Care Research","keywords":"Immunohistochemistry; Internet portal; Keratin; Computer science; Medicine; Artificial intelligence; The Internet; Pathology; World Wide Web","score_opus":0.023900409435294503,"score_gpt":0.3033232118312982,"score_spread":0.2794228023960037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235597831","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00043106268,0.0009013322,0.0017456184,0.055679765,0.93754625,0.00005046494,0.00067452993,0.0006913938,0.002279541],"genre_scores_gemma":[0.042085905,0.00986295,0.017207649,0.15430705,0.58061564,0.0006290893,0.0036025736,0.0047765644,0.18691261],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9828029,0.0031679987,0.0033682704,0.0022322317,0.0073124142,0.0011161392],"domain_scores_gemma":[0.8962839,0.026588006,0.007331598,0.006194345,0.06007286,0.0035293153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008341934,0.0023393566,0.0020986022,0.0040091584,0.0034975272,0.005290731,0.0042976653,0.008166358,0.05734987],"category_scores_gemma":[0.15483218,0.0014397852,0.0018915155,0.0026228325,0.004614743,0.003247905,0.0029951148,0.01543107,0.045427456],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000761739,0.0000091739175,0.00018935044,0.00021466428,0.00002274346,0.00045855856,0.00008879383,0.00008264254,0.00015287427,0.0008033614,0.987916,0.009985673],"study_design_scores_gemma":[0.00006519372,0.000054721684,0.0010512336,0.0008198267,0.000047514102,0.001929429,0.00023810673,0.0005850851,0.00092195196,0.0027418793,0.9914547,0.00009034479],"about_ca_topic_score_codex":0.005805391,"about_ca_topic_score_gemma":0.0071679107,"teacher_disagreement_score":0.05734987,"about_ca_system_score_codex":0.004264637,"about_ca_system_score_gemma":0.006944868,"threshold_uncertainty_score":0.19185442},"labels":[],"label_agreement":null},{"id":"W4236046808","doi":"10.1038/modpathol.2014.7","title":"Breast Pathology","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Pathology; Medicine","score_opus":0.012293608303269705,"score_gpt":0.23808739331711504,"score_spread":0.22579378501384534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236046808","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021268575,0.018196534,0.022817945,0.00755053,0.0034258885,0.0004383149,0.0018914872,0.0033489463,0.9210619],"genre_scores_gemma":[0.09477949,0.01609141,0.029362528,0.0047314563,0.0035164955,0.00022635322,0.0035961175,0.00071012875,0.84698594],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9996244,0.000050167953,0.000028430146,0.00007307843,0.00016981312,0.000054086573],"domain_scores_gemma":[0.9991035,0.00009947128,0.000045097924,0.00027623482,0.0003264544,0.00014911973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074616086,0.00055087695,0.00027737883,0.0036327024,0.00081924483,0.0013537646,0.00075299543,0.001019445,0.16925196],"category_scores_gemma":[0.0016043595,0.00042051048,0.00044447358,0.0013512875,0.0006694484,0.0008064374,0.0011793217,0.0011999895,0.0936342],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018204405,0.00010788849,0.00825539,0.0004431801,0.000046231715,0.0071932045,0.00018713673,0.00015530328,0.024375344,0.010597579,0.30431402,0.6441427],"study_design_scores_gemma":[0.0000138100595,0.000036274658,0.0063484274,0.00017425988,0.000022154025,0.038121667,0.00008598236,0.00015784125,0.004429591,0.0029058775,0.9476932,0.000010913837],"about_ca_topic_score_codex":0.0004493889,"about_ca_topic_score_gemma":0.0012023625,"teacher_disagreement_score":0.16925196,"about_ca_system_score_codex":0.0005399081,"about_ca_system_score_gemma":0.0007663337,"threshold_uncertainty_score":0.5662042},"labels":[],"label_agreement":null},{"id":"W4236493167","doi":"10.1038/modpathol.2008.224","title":"Liver &amp; Pancreas","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pathology; Pancreas; Medicine; Internal medicine","score_opus":0.02571108920688643,"score_gpt":0.28085241622913804,"score_spread":0.2551413270222516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236493167","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018810324,0.1790654,0.005700117,0.038915932,0.012618692,0.00013732685,0.0009854932,0.00081556087,0.7429511],"genre_scores_gemma":[0.2591733,0.21332547,0.018063594,0.021692868,0.057063937,0.00019135136,0.0017373686,0.0006542818,0.42809778],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99971014,0.00006620383,0.00003638088,0.000056593664,0.000074401956,0.000056369798],"domain_scores_gemma":[0.9991862,0.00020995604,0.00013501078,0.00013144515,0.00016699468,0.00017045034],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034240817,0.00076943,0.0006731347,0.002216182,0.00081846607,0.0027298254,0.0006039983,0.0018765418,0.06345942],"category_scores_gemma":[0.0017010755,0.00027504328,0.00045638965,0.0017200534,0.0013801234,0.0024060681,0.0014781506,0.0025575017,0.03212796],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002915882,0.00013846628,0.014955094,0.002139006,0.000084707994,0.06198408,0.00015826909,0.0002966213,0.0027366185,0.03943296,0.20874336,0.6690393],"study_design_scores_gemma":[0.000018840447,0.00010449397,0.010895699,0.00084854814,0.000052369527,0.2603817,0.0002637037,0.00019002029,0.0012454694,0.019917516,0.7060552,0.000026508851],"about_ca_topic_score_codex":0.0006987902,"about_ca_topic_score_gemma":0.0012693391,"teacher_disagreement_score":0.9365406,"about_ca_system_score_codex":0.000746482,"about_ca_system_score_gemma":0.00070760155,"threshold_uncertainty_score":0.21229291},"labels":[],"label_agreement":null},{"id":"W4236668196","doi":"10.1038/sj.modpathol.3800890","title":"Oral","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Pathology; Medicine","score_opus":0.01646024389370643,"score_gpt":0.27687815729700205,"score_spread":0.2604179134032956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236668196","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0031192177,0.004258236,0.0023903914,0.003009518,0.004080334,0.00016568972,0.0015284511,0.00076539075,0.98068273],"genre_scores_gemma":[0.008761668,0.0025337306,0.0016652328,0.0015184627,0.0007097066,0.000077416844,0.000859623,0.00023487276,0.9836393],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996125,0.00002981172,0.000020801299,0.00006550543,0.0002162998,0.000055053],"domain_scores_gemma":[0.9996606,0.00003878842,0.00002347312,0.00008021244,0.00014012479,0.00005675224],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040192102,0.00067687,0.0004287891,0.0012304848,0.0017317686,0.0038516095,0.00083800935,0.0016044764,0.6005634],"category_scores_gemma":[0.0012970782,0.00027451068,0.0005086942,0.0006268725,0.0006915771,0.0014339247,0.0022160588,0.0017382164,0.3515175],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014335063,0.000118499396,0.0005215187,0.0005339093,0.000011582608,0.00088408036,0.0004925809,0.00005047995,0.010377096,0.014827124,0.4126094,0.55943036],"study_design_scores_gemma":[0.000008786253,0.000017508613,0.00064784195,0.000108108055,0.0000067122974,0.0006754274,0.00022718162,0.000022818795,0.0010656541,0.0014639057,0.9957503,0.0000056588256],"about_ca_topic_score_codex":0.001683227,"about_ca_topic_score_gemma":0.0033157035,"teacher_disagreement_score":0.3994366,"about_ca_system_score_codex":0.000631752,"about_ca_system_score_gemma":0.0013935182,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4237307154","doi":"10.1038/s41379-019-0224-x","title":"Abstracts from USCAP 2019: Bone and Soft Tissue Pathology (37-99)","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Orthopedic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Pathology; Soft tissue pathology; Soft tissue; Bone pathology; Medicine; Anatomy","score_opus":0.009529281471611065,"score_gpt":0.257792516766838,"score_spread":0.24826323529522695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237307154","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028109273,0.04345218,0.0019898976,0.03773888,0.119415455,0.0013879853,0.09442978,0.002384774,0.6963901],"genre_scores_gemma":[0.006670187,0.026630657,0.0015997324,0.008054319,0.045743935,0.00037834168,0.060436007,0.00063003745,0.84985673],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985977,0.00016853093,0.00015427217,0.00009405725,0.0007884605,0.00019701307],"domain_scores_gemma":[0.9916578,0.0005595115,0.00047789645,0.0002488547,0.0050558113,0.0020000252],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019086973,0.0015414042,0.0010738749,0.0069602123,0.0011700207,0.0047155465,0.0013938812,0.0028805316,0.48962134],"category_scores_gemma":[0.0042137667,0.00051700626,0.0013053413,0.0030781443,0.00041117828,0.0012882082,0.0026282044,0.001869108,0.33258313],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004726337,0.000031775366,0.00014875703,0.0001958196,0.0000047364733,0.000045473982,0.000002831146,0.000032190608,0.00015781222,0.00009376166,0.9776748,0.02156493],"study_design_scores_gemma":[0.00003503018,0.0000454425,0.0026066802,0.00056266715,0.000015655998,0.0001477106,0.000021804753,0.00009572898,0.00026420102,0.00046658603,0.995726,0.000012502421],"about_ca_topic_score_codex":0.0073296344,"about_ca_topic_score_gemma":0.017623557,"teacher_disagreement_score":0.48962134,"about_ca_system_score_codex":0.001998732,"about_ca_system_score_gemma":0.004659684,"threshold_uncertainty_score":0.7279932},"labels":[],"label_agreement":null},{"id":"W4237477715","doi":"10.1038/modpathol.2011.34","title":"Pulmonary","year":2011,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chronic Obstructive Pulmonary Disease (COPD) Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"North York General Hospital; Sunnybrook Health Science Centre; University of Toronto","funders":"","keywords":"Medicine; Pathology","score_opus":0.044015692541980296,"score_gpt":0.2925625257748777,"score_spread":0.2485468332328974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237477715","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018847272,0.021588258,0.015198553,0.009119159,0.0056431284,0.00039066368,0.0021894216,0.0023516195,0.924672],"genre_scores_gemma":[0.12370627,0.008093223,0.0050235717,0.0066219354,0.0032612388,0.00016811524,0.0020062441,0.00036089364,0.85075855],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993944,0.00007002386,0.000037263944,0.00011407629,0.00027880954,0.00010540657],"domain_scores_gemma":[0.9994215,0.00006219203,0.000042115884,0.00013490778,0.00019884434,0.0001405772],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005380894,0.00047831502,0.0003681726,0.0010914806,0.000988039,0.0021124473,0.00074842374,0.0011036462,0.16930671],"category_scores_gemma":[0.001330735,0.00020032265,0.00045887224,0.0005457285,0.00057372026,0.00078088406,0.0014711356,0.001315208,0.08341946],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002653927,0.0002581805,0.0066279154,0.0005582547,0.00004190697,0.0035351426,0.0004195946,0.00016557862,0.028830482,0.022889905,0.20271617,0.7336914],"study_design_scores_gemma":[0.000031285894,0.00009581163,0.006553215,0.00015924011,0.0000234373,0.0070787314,0.00013026182,0.0001650481,0.004455878,0.0028491917,0.978445,0.000012965496],"about_ca_topic_score_codex":0.0013326374,"about_ca_topic_score_gemma":0.0015332724,"teacher_disagreement_score":0.8306933,"about_ca_system_score_codex":0.0006011265,"about_ca_system_score_gemma":0.0011375151,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4237794290","doi":"10.1038/modpathol.2010.10","title":"Cytopathology","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Cytopathology; Pathology; Medicine; Hematopathology; Cytology; Biology","score_opus":0.022062313348686472,"score_gpt":0.339328207741843,"score_spread":0.31726589439315656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237794290","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08861522,0.04576443,0.09253681,0.011828827,0.006470928,0.003446106,0.0073364004,0.00787842,0.73612285],"genre_scores_gemma":[0.34751847,0.025764374,0.12476081,0.014554137,0.004074242,0.0020770244,0.011494445,0.0019678285,0.46778876],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99864393,0.0002355541,0.00015684313,0.00029466147,0.0005222957,0.00014675096],"domain_scores_gemma":[0.9975333,0.00037132954,0.000138336,0.0007247981,0.0010081168,0.00022408264],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00161149,0.00075916614,0.00049740996,0.0072706407,0.0018009363,0.0019739142,0.0012806418,0.0016348198,0.08593117],"category_scores_gemma":[0.0034766411,0.00062592095,0.0008953094,0.002141925,0.0014139,0.0011819955,0.0018457806,0.0018884041,0.038006343],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006664026,0.00031509294,0.056653973,0.0019890286,0.00015515313,0.015635146,0.0014581858,0.00025001683,0.2269538,0.024558866,0.12673223,0.5446321],"study_design_scores_gemma":[0.000063092375,0.00020254414,0.025165163,0.0008249187,0.00009628947,0.05245748,0.00057948136,0.0005787531,0.058081422,0.007221201,0.8546753,0.00005435652],"about_ca_topic_score_codex":0.00086266204,"about_ca_topic_score_gemma":0.0014735745,"teacher_disagreement_score":0.9140688,"about_ca_system_score_codex":0.00072767964,"about_ca_system_score_gemma":0.001675917,"threshold_uncertainty_score":0.28746837},"labels":[],"label_agreement":null},{"id":"W4238034612","doi":"10.1038/modpathol.2013.25","title":"Quality Assurance","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"University of Texas MD Anderson Cancer Center","keywords":"Quality assurance; Medical physics; Pathology; Medicine; External quality assessment","score_opus":0.02600844852043886,"score_gpt":0.3603041481797382,"score_spread":0.33429569965929934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238034612","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0254653,0.003341356,0.6495588,0.016789721,0.0024187916,0.009014996,0.0071251877,0.014693845,0.271592],"genre_scores_gemma":[0.30661124,0.0022817282,0.48491794,0.009712566,0.0015394412,0.005685098,0.018830445,0.0040657665,0.16635586],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.927865,0.021045856,0.0066602034,0.0081143575,0.033767585,0.0025469582],"domain_scores_gemma":[0.762872,0.0328046,0.011338251,0.050619084,0.13781041,0.0045557288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.057724725,0.0007698503,0.00069169316,0.0044452995,0.0022310321,0.008501413,0.0026530721,0.0015349246,0.05509287],"category_scores_gemma":[0.106575124,0.00074612675,0.0008140094,0.0039236154,0.0017791459,0.0033950296,0.0040304214,0.0021666938,0.019781807],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005230409,0.0004245278,0.016837934,0.0011822109,0.0001108475,0.00022169447,0.0027501127,0.0023118076,0.010681293,0.05730116,0.16100706,0.7466484],"study_design_scores_gemma":[0.00015970618,0.00044117973,0.019258589,0.000757815,0.000077647295,0.00068853225,0.0009408181,0.007673712,0.020314831,0.018501597,0.9310811,0.00010446603],"about_ca_topic_score_codex":0.00796085,"about_ca_topic_score_gemma":0.004648233,"teacher_disagreement_score":0.057724725,"about_ca_system_score_codex":0.0059045074,"about_ca_system_score_gemma":0.017230209,"threshold_uncertainty_score":0.30528122},"labels":[],"label_agreement":null},{"id":"W4238849000","doi":"10.1038/sj.modpathol.3801039","title":"Infections","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Pathology; Medicine","score_opus":0.028832754905011818,"score_gpt":0.2693312317826026,"score_spread":0.2404984768775908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238849000","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1266085,0.043316722,0.009167568,0.00861705,0.0058541396,0.0015147557,0.007367601,0.001345839,0.7962078],"genre_scores_gemma":[0.6037139,0.03194052,0.007975045,0.014523805,0.002248181,0.0005368802,0.007659555,0.00025402082,0.33114806],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9985374,0.00020571747,0.00011724894,0.00021648154,0.00052702404,0.00039611693],"domain_scores_gemma":[0.99926347,0.00007911053,0.00014813716,0.000105404215,0.00024300735,0.00016076623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063023984,0.00087887276,0.00041081465,0.001078037,0.0011381215,0.0023986711,0.00054448075,0.0011724305,0.051365886],"category_scores_gemma":[0.0016644757,0.00022312705,0.00059535797,0.00065598416,0.0005465556,0.00084175717,0.0012919749,0.0013588818,0.015843123],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010003137,0.00086130796,0.05613471,0.0024870432,0.00017653925,0.012137334,0.0018512247,0.00019433156,0.052907262,0.02472997,0.24635379,0.6011661],"study_design_scores_gemma":[0.000052032196,0.0004360431,0.021751182,0.0009225444,0.00010008802,0.028550843,0.00095544563,0.00011786448,0.00962661,0.0031732388,0.9342782,0.000036041547],"about_ca_topic_score_codex":0.0030721186,"about_ca_topic_score_gemma":0.0022782842,"teacher_disagreement_score":0.051365886,"about_ca_system_score_codex":0.00087373646,"about_ca_system_score_gemma":0.0012319525,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4238884360","doi":"10.1038/sj.modpathol.3800886","title":"Mediastinal","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Myasthenia Gravis and Thymoma","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Monsanto (Canada)","funders":"","keywords":"Pathology; Medicine","score_opus":0.009795963237976595,"score_gpt":0.2398403327958814,"score_spread":0.2300443695579048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238884360","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2763606,0.018396389,0.036433954,0.0052786944,0.0034175827,0.0003690243,0.004028283,0.0038515572,0.6518639],"genre_scores_gemma":[0.84720683,0.003861956,0.013906702,0.0050787795,0.0017507758,0.00009515422,0.0013704057,0.00046106413,0.12626842],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998894,0.000007643037,0.000006780118,0.000042611187,0.000025986437,0.000027626353],"domain_scores_gemma":[0.99983263,0.000034205746,0.000019848261,0.00004639819,0.000023639908,0.000043212825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013668659,0.00065434945,0.00022968445,0.00091803883,0.0007967394,0.0006684471,0.0004042783,0.0011275422,0.055246558],"category_scores_gemma":[0.00057553337,0.00019317374,0.0003890514,0.0003038968,0.0005182978,0.00085818605,0.00067208696,0.0014026953,0.017029082],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010779437,0.00022525927,0.019978212,0.00082106964,0.000108574604,0.20690529,0.0007816902,0.00048041192,0.24808161,0.011630645,0.022653345,0.48725593],"study_design_scores_gemma":[0.00016585093,0.0007287183,0.050085634,0.00039877082,0.00015933461,0.49573982,0.00048655266,0.0017643094,0.055999167,0.0074883667,0.38692126,0.00006224312],"about_ca_topic_score_codex":0.0006942565,"about_ca_topic_score_gemma":0.0011623733,"teacher_disagreement_score":0.055246558,"about_ca_system_score_codex":0.00039454814,"about_ca_system_score_gemma":0.00029343492,"threshold_uncertainty_score":0.18481815},"labels":[],"label_agreement":null},{"id":"W4239084703","doi":"10.1038/modpathol.2015.30","title":"Techniques","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Clinical Laboratory Practices and Quality Control","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pathology; Medicine","score_opus":0.1373135237003249,"score_gpt":0.4138818450099993,"score_spread":0.2765683213096744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239084703","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018851116,0.0048219888,0.5084243,0.0014804048,0.0031075466,0.0014805559,0.0021831568,0.0068573053,0.45279366],"genre_scores_gemma":[0.1042067,0.004804497,0.37140942,0.0022583383,0.0008011766,0.0014822037,0.0048324508,0.0018007006,0.5084046],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983791,0.00014420775,0.000095374984,0.00047238494,0.0007648591,0.00014399763],"domain_scores_gemma":[0.9989737,0.00014494601,0.00006758142,0.00039906727,0.0003506906,0.00006401923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011330378,0.0009205447,0.00045316864,0.0022007413,0.001517239,0.0022450918,0.0016276791,0.0009909369,0.09542159],"category_scores_gemma":[0.0021513903,0.0005013343,0.00081175804,0.0013871851,0.000847456,0.0015022856,0.0023105347,0.0016401573,0.06664433],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026902056,0.00018206653,0.0016295525,0.0009792577,0.000050813465,0.00037920274,0.00081275613,0.00066860375,0.1078331,0.059092462,0.06400137,0.76410174],"study_design_scores_gemma":[0.000036793866,0.00019233247,0.0015814268,0.00018799216,0.000055660756,0.0019078314,0.00025247337,0.0012853598,0.070764795,0.010088246,0.9136033,0.000043753877],"about_ca_topic_score_codex":0.000728321,"about_ca_topic_score_gemma":0.0011419278,"teacher_disagreement_score":0.09542159,"about_ca_system_score_codex":0.0004795241,"about_ca_system_score_gemma":0.0014682547,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4239231717","doi":"10.1038/sj.modpathol.3801040","title":"Kidney","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal and Vascular Pathologies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pathology; Kidney; Medicine; Biology; Internal medicine","score_opus":0.04054655184378813,"score_gpt":0.2677325464481474,"score_spread":0.2271859946043593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239231717","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03394523,0.046538316,0.029806575,0.024123348,0.009122551,0.0002446674,0.002404732,0.0043666936,0.8494478],"genre_scores_gemma":[0.19154616,0.022157561,0.017873682,0.012167931,0.00464189,0.00014176534,0.0027862433,0.00077687856,0.7479079],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9995441,0.00004214822,0.000027584305,0.00012920782,0.00017033049,0.00008672931],"domain_scores_gemma":[0.9994375,0.000037520742,0.000058940266,0.00015462723,0.00016776483,0.00014362074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006383519,0.0004563831,0.0005909503,0.0012653411,0.0011941525,0.0024593486,0.0008545716,0.0012505243,0.0953832],"category_scores_gemma":[0.0009971833,0.00031211015,0.0007631421,0.00078691007,0.0008635185,0.0011565032,0.0015429313,0.0021214352,0.04516897],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005511771,0.00025022234,0.009052779,0.0007840458,0.00023092002,0.0076997173,0.00026597167,0.00022269736,0.057509784,0.061711043,0.24527225,0.61644936],"study_design_scores_gemma":[0.000040246607,0.00006839268,0.0055915317,0.000110327506,0.00006570012,0.015620373,0.00007556372,0.0001631949,0.010548132,0.008281109,0.9594147,0.000020646192],"about_ca_topic_score_codex":0.0014272749,"about_ca_topic_score_gemma":0.001885759,"teacher_disagreement_score":0.0953832,"about_ca_system_score_codex":0.0010010764,"about_ca_system_score_gemma":0.0018315127,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4239852228","doi":"10.1038/s41379-020-0483-6","title":"Abstracts from USCAP 2020: Pediatric and Perinatal Pathology (1842-1868)","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Medical History and Innovations","field":"Arts and Humanities","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal Neurological Institute and Hospital; McGill University","funders":"","keywords":"Pathology; Medicine","score_opus":0.037047417695330424,"score_gpt":0.21796036931616883,"score_spread":0.1809129516208384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239852228","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003513344,0.12280964,0.0008804356,0.032917302,0.23595732,0.0005612113,0.11866028,0.0009529811,0.48374742],"genre_scores_gemma":[0.012088868,0.052462224,0.0012740139,0.0066984016,0.07566764,0.00040848338,0.046798754,0.00041839585,0.8041833],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99884486,0.00012135084,0.000121475074,0.000104658655,0.0006549587,0.000152621],"domain_scores_gemma":[0.9949162,0.00039143424,0.00033282777,0.00014276736,0.0031177932,0.0010990034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016550148,0.0014159556,0.0006446332,0.007730332,0.0010995195,0.0030599541,0.00096559763,0.0018100387,0.23748967],"category_scores_gemma":[0.004350585,0.00042858173,0.0007320927,0.0040925997,0.0004968264,0.0013154548,0.0028943676,0.0015617812,0.08791443],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052041425,0.00001095702,0.00014938947,0.000271463,0.000004345527,0.000048543065,0.00001213572,0.0000476609,0.00011335023,0.00030463334,0.97930557,0.019679913],"study_design_scores_gemma":[0.0000088685665,0.000010928296,0.0019328861,0.00031209184,0.0000051796433,0.00008635794,0.000018301856,0.000022348624,0.00012612248,0.00021826869,0.9972536,0.000005084112],"about_ca_topic_score_codex":0.01479658,"about_ca_topic_score_gemma":0.02278554,"teacher_disagreement_score":0.23748967,"about_ca_system_score_codex":0.003202439,"about_ca_system_score_gemma":0.0051829987,"threshold_uncertainty_score":0.7944821},"labels":[],"label_agreement":null},{"id":"W4241586776","doi":"10.1038/modpathol.2015.24","title":"Neuropathology and Ophthalmic Pathology","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; Health Sciences Centre","funders":"","keywords":"Neuropathology; Pathology; Ophthalmic pathology; Medicine; Dermatopathology; Anatomical pathology; Ophthalmology; Neuro-ophthalmology; Glaucoma; Disease; Immunohistochemistry","score_opus":0.04206065563354571,"score_gpt":0.3076503742397357,"score_spread":0.26558971860618996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241586776","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.068255775,0.53937167,0.009068681,0.02997851,0.004051225,0.00007278465,0.00025059257,0.00031682913,0.34863392],"genre_scores_gemma":[0.55207264,0.28078595,0.011215009,0.009227735,0.012343423,0.000079487676,0.00030555797,0.000086713415,0.13388352],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995345,0.00011968119,0.000053531734,0.00007072068,0.00012774952,0.00009384831],"domain_scores_gemma":[0.99928266,0.00016846537,0.00016875625,0.00010866408,0.0001751893,0.00009624882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007383723,0.00061878416,0.00037870774,0.0043141884,0.0011297453,0.003046537,0.0007610309,0.0015842499,0.011645923],"category_scores_gemma":[0.0009959319,0.00023867411,0.00035744006,0.0017474438,0.004886282,0.0033564395,0.0017874823,0.0020168186,0.0028880194],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022758124,0.00026011176,0.025383161,0.0013191343,0.00014036165,0.025892738,0.0013820538,0.0005404871,0.020960685,0.46488586,0.043231037,0.41577667],"study_design_scores_gemma":[0.000020550304,0.00018327574,0.04376176,0.0012220487,0.00010382044,0.105011106,0.0027332956,0.0006293328,0.0056049093,0.28757298,0.55306107,0.00009586432],"about_ca_topic_score_codex":0.0021560849,"about_ca_topic_score_gemma":0.0027499788,"teacher_disagreement_score":0.011645923,"about_ca_system_score_codex":0.001443217,"about_ca_system_score_gemma":0.0013125701,"threshold_uncertainty_score":0.038959444},"labels":[],"label_agreement":null},{"id":"W4242503440","doi":"10.1038/modpathol.2008.213","title":"Dermatopathology","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kingston Health Sciences Centre","funders":"","keywords":"Dermatopathology; Pathology; Medicine; Dermatology","score_opus":0.01300526761141851,"score_gpt":0.258288498815865,"score_spread":0.2452832312044465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242503440","genre_codex":"other","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0152986515,0.01599724,0.008469985,0.0064739846,0.0035806242,0.00014089719,0.00051962904,0.0010975287,0.9484215],"genre_scores_gemma":[0.10387079,0.011366755,0.0082223145,0.0040602474,0.0034392143,0.00006822229,0.0006879714,0.0002754074,0.86800915],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997955,0.000032124164,0.00001608516,0.000041117302,0.00008036187,0.00003481552],"domain_scores_gemma":[0.9996301,0.000041868432,0.00002834357,0.00010260873,0.00011820289,0.00007881629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002662003,0.0004415925,0.00020103656,0.0018109246,0.0009793787,0.0012237867,0.00047303003,0.0009570745,0.18259555],"category_scores_gemma":[0.00073228806,0.0002216426,0.00028799076,0.0008495018,0.0006311806,0.00088572985,0.000994711,0.0012097774,0.06498322],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012606315,0.00012620943,0.006722429,0.0005083861,0.000033700828,0.019465556,0.00029767197,0.0001544558,0.022279583,0.027386563,0.32993865,0.5929608],"study_design_scores_gemma":[0.0000081960625,0.000020583235,0.0035045452,0.0001384915,0.000010202801,0.056886308,0.000084566724,0.00010464829,0.0020965678,0.004031184,0.93310857,0.000006161799],"about_ca_topic_score_codex":0.0004273014,"about_ca_topic_score_gemma":0.0011956585,"teacher_disagreement_score":0.18259555,"about_ca_system_score_codex":0.00047677074,"about_ca_system_score_gemma":0.0004437008,"threshold_uncertainty_score":0.61084294},"labels":[],"label_agreement":null},{"id":"W4242612637","doi":"10.1038/s41379-020-0465-8","title":"Abstracts from USCAP 2020: Cardiovascular Pathology (300-316)","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cardiovascular Disease and Adiposity","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Queen's University; University of Ottawa","funders":"","keywords":"Pathology; Medicine","score_opus":0.018213439537606207,"score_gpt":0.2278312376141916,"score_spread":0.2096177980765854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242612637","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022106455,0.027981037,0.0017627953,0.04905522,0.15648074,0.0015456948,0.06734589,0.003560043,0.69005805],"genre_scores_gemma":[0.004335285,0.012429657,0.0009959865,0.013511627,0.08233378,0.00045219902,0.029931433,0.00059315684,0.8554169],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99867177,0.000182915,0.00013579264,0.00011593657,0.0006957093,0.00019786242],"domain_scores_gemma":[0.9895788,0.0009924966,0.0005674048,0.0002837929,0.0049932217,0.0035843325],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0020847814,0.0019456306,0.0013879911,0.005076493,0.0011422547,0.004783158,0.0014651868,0.004954888,0.6107063],"category_scores_gemma":[0.0054188473,0.00075994607,0.0014193348,0.0019381645,0.00041612898,0.0011725042,0.0025344375,0.0026296873,0.45710164],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008380713,0.000040926527,0.000087078835,0.00013031652,0.0000040757227,0.000039207713,0.0000018359093,0.000028780583,0.0001535561,0.00006999817,0.9847453,0.014615038],"study_design_scores_gemma":[0.00015312154,0.00011630789,0.0026692967,0.0005815769,0.000022482232,0.00015186185,0.000016886868,0.00019415685,0.00031105132,0.00062309246,0.995138,0.00002233891],"about_ca_topic_score_codex":0.0040866816,"about_ca_topic_score_gemma":0.008759681,"teacher_disagreement_score":0.6107063,"about_ca_system_score_codex":0.0015753972,"about_ca_system_score_gemma":0.0035494368,"threshold_uncertainty_score":0.55528015},"labels":[],"label_agreement":null},{"id":"W4242691513","doi":"10.1038/modpathol.2012.5","title":"Kidney","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal and Vascular Pathologies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Pathology; Kidney; Internal medicine","score_opus":0.03245290144034222,"score_gpt":0.28855719335716906,"score_spread":0.2561042919168268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242691513","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034518477,0.04660194,0.032409552,0.023677632,0.0092397155,0.00026694484,0.0027360138,0.0047939927,0.84575564],"genre_scores_gemma":[0.20745376,0.022826144,0.01969734,0.013574771,0.0049961396,0.00016129027,0.0031871928,0.0008897799,0.72721356],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994972,0.000046528115,0.000031355812,0.00014077393,0.00018857334,0.00009561355],"domain_scores_gemma":[0.999385,0.000042718602,0.00006513262,0.00016551722,0.00018383165,0.00015780228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068809994,0.0004534681,0.0005904324,0.0013369871,0.0012174984,0.0025548672,0.00086417707,0.0012625247,0.09354244],"category_scores_gemma":[0.0011005286,0.0003092554,0.0007824442,0.0008479378,0.0008755816,0.0011760108,0.0016214603,0.0021387627,0.043965306],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055532606,0.0002493801,0.009801657,0.00084425043,0.00024054058,0.008090757,0.0002909233,0.00023192879,0.05670648,0.05984389,0.24253894,0.62060595],"study_design_scores_gemma":[0.000041400584,0.00006911362,0.005782251,0.00012236465,0.00006960708,0.015855452,0.00008456478,0.00017064238,0.010652057,0.008277633,0.9588526,0.000022212396],"about_ca_topic_score_codex":0.0015175367,"about_ca_topic_score_gemma":0.0019529057,"teacher_disagreement_score":0.09354244,"about_ca_system_score_codex":0.0010068623,"about_ca_system_score_gemma":0.0019378444,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4242698245","doi":"10.1038/modpathol.2013.5","title":"Cytopathology","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Cytopathology; Pathology; Hematopathology; Medicine; Biology; Cytology","score_opus":0.027463647034352338,"score_gpt":0.31650843231038134,"score_spread":0.289044785276029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242698245","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08641991,0.04388677,0.09807511,0.012133257,0.0065029836,0.003846559,0.007975289,0.008396971,0.73276305],"genre_scores_gemma":[0.34717602,0.025540309,0.13624732,0.016119543,0.004304585,0.0023784195,0.012699485,0.002181745,0.4533525],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985066,0.000265205,0.00017138963,0.00031833522,0.00057735766,0.00016114976],"domain_scores_gemma":[0.99726605,0.00041363479,0.00015522035,0.00077075855,0.0011513955,0.00024286276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017124589,0.0007928749,0.0005150747,0.00751928,0.0017961166,0.0020322537,0.001338792,0.0016495506,0.08578124],"category_scores_gemma":[0.0038611803,0.0006288712,0.000920961,0.0021963376,0.0014222648,0.00118465,0.00191923,0.0019419093,0.03828105],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065032067,0.0003154139,0.060466524,0.002133421,0.00015766911,0.015969265,0.0015372859,0.00026693597,0.20686261,0.023982543,0.13462731,0.5530307],"study_design_scores_gemma":[0.00006430014,0.00020093707,0.025470654,0.00094701623,0.00009901715,0.049308356,0.0006251389,0.00062205305,0.055260375,0.00732069,0.86002505,0.000056367713],"about_ca_topic_score_codex":0.0009341942,"about_ca_topic_score_gemma":0.0015364981,"teacher_disagreement_score":0.08578124,"about_ca_system_score_codex":0.00074884784,"about_ca_system_score_gemma":0.0018092988,"threshold_uncertainty_score":0.28696686},"labels":[],"label_agreement":null},{"id":"W4242848482","doi":"10.1038/modpathol.2012.24","title":"Quality Assurance","year":2012,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Autopsy Techniques and Outcomes","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Memorial University of Newfoundland; Health Sciences Centre","funders":"","keywords":"Quality assurance; Medical physics; Medicine; Pathology; External quality assessment","score_opus":0.04869162440349234,"score_gpt":0.3655214251989087,"score_spread":0.31682980079541634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242848482","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02955838,0.00485062,0.52026314,0.02707754,0.0027748104,0.016885053,0.0074124406,0.008755542,0.3824225],"genre_scores_gemma":[0.35028398,0.0033167095,0.417464,0.0165119,0.0017783635,0.011030235,0.017022075,0.002220702,0.180372],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.90323734,0.03507111,0.011545618,0.008764341,0.037985824,0.003395764],"domain_scores_gemma":[0.705873,0.041896995,0.017053023,0.048132382,0.1804092,0.006635503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.083556436,0.000668428,0.00067144673,0.0053435876,0.002529109,0.008561993,0.002710705,0.0015974506,0.04748657],"category_scores_gemma":[0.13652532,0.00073956203,0.00086502644,0.004367484,0.0018310264,0.0029612617,0.0039252164,0.002269447,0.015233384],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037512524,0.0005087404,0.026746735,0.0014003405,0.00011808388,0.00020450189,0.0031221171,0.0014895184,0.0058729327,0.06641919,0.14322443,0.7505183],"study_design_scores_gemma":[0.00016738992,0.0005140193,0.037887704,0.0012661677,0.00009022244,0.0007547924,0.0011420973,0.0041793324,0.010862109,0.014477889,0.9285679,0.00009037194],"about_ca_topic_score_codex":0.009290549,"about_ca_topic_score_gemma":0.00656951,"teacher_disagreement_score":0.083556436,"about_ca_system_score_codex":0.0076889684,"about_ca_system_score_gemma":0.03023161,"threshold_uncertainty_score":0.44189394},"labels":[],"label_agreement":null},{"id":"W4243497167","doi":"10.1038/modpathol.2010.21","title":"Kidney","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal and Vascular Pathologies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital du Sacré-Cœur de Montréal","funders":"","keywords":"Pathology; Medicine; Kidney; Internal medicine","score_opus":0.015004112094489737,"score_gpt":0.27103802169366664,"score_spread":0.2560339095991769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243497167","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03579286,0.045453556,0.03119672,0.02327763,0.008882361,0.00025307594,0.002536364,0.0045387777,0.8480687],"genre_scores_gemma":[0.19803706,0.021406572,0.018201169,0.012244231,0.004457518,0.00014192669,0.0028283454,0.0007939181,0.7418893],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9995309,0.00004253482,0.000028470273,0.00013283647,0.00017627083,0.00008907356],"domain_scores_gemma":[0.99943286,0.000039054674,0.000060027265,0.00015502266,0.00016757456,0.00014537318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064795255,0.0004559848,0.00057897315,0.0012761246,0.0012002039,0.002475691,0.0008492319,0.001258426,0.093424104],"category_scores_gemma":[0.0010059227,0.0003087022,0.00077153585,0.00080842245,0.0008660425,0.0011435002,0.0015456195,0.0020996172,0.044080243],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058004865,0.00025724116,0.009570133,0.00081379875,0.00024232287,0.008526854,0.0002853492,0.0002343776,0.06354699,0.061412234,0.23447472,0.620056],"study_design_scores_gemma":[0.000041273903,0.00007134919,0.0058374945,0.000113915485,0.000069046466,0.016960315,0.00008113525,0.00016977858,0.011481769,0.008270561,0.9568818,0.000021593078],"about_ca_topic_score_codex":0.0014906767,"about_ca_topic_score_gemma":0.0019807213,"teacher_disagreement_score":0.093424104,"about_ca_system_score_codex":0.0010074188,"about_ca_system_score_gemma":0.0018650033,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4243511633","doi":"10.1038/modpathol.2015.22","title":"Kidney/Renal Pathology","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal and Vascular Pathologies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pathology; Renal pathology; Kidney; Medicine; Internal medicine","score_opus":0.056379057352192674,"score_gpt":0.2947135896488409,"score_spread":0.23833453229664825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243511633","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014818175,0.14993422,0.010459779,0.024571108,0.01713184,0.00020815982,0.0011106627,0.0012945068,0.78047144],"genre_scores_gemma":[0.16825663,0.1728033,0.02691647,0.024940152,0.06586777,0.0001676421,0.0024870057,0.0008074371,0.5377535],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99929166,0.00009589932,0.00009250171,0.00013342699,0.00027292353,0.00011345875],"domain_scores_gemma":[0.999057,0.00011622178,0.00013515317,0.0001706814,0.0002801435,0.00024083503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001060454,0.0006904494,0.00058641424,0.003414083,0.0012078097,0.0023849425,0.00092922646,0.0018203779,0.061555166],"category_scores_gemma":[0.002017316,0.00026256332,0.0007027485,0.0016173888,0.0022458332,0.00202889,0.0024703178,0.0023660294,0.03187155],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017227857,0.00014627828,0.00788888,0.002292056,0.00008485935,0.014703397,0.0003718432,0.00022607051,0.008969972,0.077000916,0.29494822,0.5931952],"study_design_scores_gemma":[0.000010044302,0.000037081554,0.005426873,0.0005887526,0.000037140977,0.039860975,0.00015585126,0.000080950624,0.0014927309,0.015312294,0.9369775,0.000019810315],"about_ca_topic_score_codex":0.00072741305,"about_ca_topic_score_gemma":0.0013359612,"teacher_disagreement_score":0.061555166,"about_ca_system_score_codex":0.00087034627,"about_ca_system_score_gemma":0.0021251705,"threshold_uncertainty_score":0.20592254},"labels":[],"label_agreement":null},{"id":"W4245371351","doi":"10.1038/modpathol.3880722","title":"Announcements","year":2003,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Medical Case Reports and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Pathology","score_opus":0.03665187872286351,"score_gpt":0.3005073025610943,"score_spread":0.2638554238382308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245371351","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021589897,0.0026913323,0.0010234286,0.24911405,0.416392,0.00058553217,0.0047717295,0.0017103814,0.32155263],"genre_scores_gemma":[0.0059655956,0.0006179764,0.00043801955,0.068499215,0.048011336,0.00014386995,0.0012757559,0.0002446337,0.8748036],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99859697,0.0001730922,0.000058991594,0.00018015552,0.0007239125,0.00026684412],"domain_scores_gemma":[0.9937133,0.00110355,0.00027719265,0.00043309288,0.0020295086,0.0024433315],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0018402736,0.00066172646,0.0006551501,0.0012909245,0.0017171288,0.0030133445,0.0014954382,0.0069079064,0.3384874],"category_scores_gemma":[0.011158547,0.00033616944,0.00084328686,0.00055787555,0.000554983,0.0008551035,0.0014770087,0.005308921,0.19560625],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006686859,0.0000140124475,0.00010064073,0.00001964647,0.0000016917888,0.00014623547,0.00000614197,0.0000116636065,0.00010480251,0.00044754322,0.99377704,0.005303723],"study_design_scores_gemma":[0.000031078915,0.000033543,0.00074883935,0.000025348194,0.000004458203,0.00018241355,0.000042997715,0.000058570877,0.00018062447,0.00057394785,0.99810946,0.000008680439],"about_ca_topic_score_codex":0.002790474,"about_ca_topic_score_gemma":0.007204916,"teacher_disagreement_score":0.6615126,"about_ca_system_score_codex":0.0014190375,"about_ca_system_score_gemma":0.0019150914,"threshold_uncertainty_score":0.94356745},"labels":[],"label_agreement":null},{"id":"W4245402616","doi":"10.1038/sj.modpathol.3800851","title":"Kidney","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal and Vascular Pathologies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University Health Network; University of British Columbia; University of Toronto","funders":"","keywords":"Pathology; Medicine; Kidney; Internal medicine","score_opus":0.01372765807861996,"score_gpt":0.24924475263945392,"score_spread":0.23551709456083397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245402616","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031360433,0.045223195,0.029159233,0.023281762,0.008883196,0.0002497259,0.002518847,0.004492472,0.85483116],"genre_scores_gemma":[0.17111908,0.021410726,0.016910298,0.0113127995,0.004264901,0.00013744381,0.002872669,0.00075908285,0.77121294],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995523,0.000040280276,0.000026927994,0.00012584533,0.0001691268,0.00008558644],"domain_scores_gemma":[0.99943966,0.000036140897,0.000057875397,0.00015401651,0.00016712691,0.00014505468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006308865,0.00046970532,0.0006097119,0.0012790443,0.0012198398,0.0024858674,0.0008668883,0.0012580928,0.10287466],"category_scores_gemma":[0.0009879138,0.00031840758,0.0007766155,0.00079763087,0.0008272877,0.0011588086,0.0015616586,0.002118643,0.050424002],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005645893,0.0002482244,0.008634712,0.00076125626,0.00022480845,0.007506458,0.0002537251,0.00021818366,0.055249806,0.057644967,0.25101534,0.617678],"study_design_scores_gemma":[0.00004017787,0.00006746049,0.005355269,0.00010606801,0.000063144675,0.014811784,0.0000714511,0.0001560128,0.010165908,0.007719866,0.961423,0.00001990034],"about_ca_topic_score_codex":0.0014443437,"about_ca_topic_score_gemma":0.0019585832,"teacher_disagreement_score":0.10287466,"about_ca_system_score_codex":0.0009878447,"about_ca_system_score_gemma":0.0018189567,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4245540744","doi":"10.1038/modpathol.2014.24","title":"Pancreas and Biliary Tree","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Pancreatitis Pathology and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Western University; McGill University","funders":"","keywords":"Pancreas; Pathology; Medicine; Internal medicine","score_opus":0.012253427169073723,"score_gpt":0.24877294485386225,"score_spread":0.23651951768478854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245540744","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06943689,0.47035605,0.014284149,0.048138227,0.010458821,0.00007788604,0.0003577817,0.0005869194,0.3863033],"genre_scores_gemma":[0.46634147,0.2739983,0.018897206,0.015770026,0.042782325,0.00008501017,0.00046252017,0.0002276973,0.18143542],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99971217,0.00008106715,0.00003671105,0.00004803427,0.0000793769,0.000042593805],"domain_scores_gemma":[0.99963367,0.00009190595,0.000063993866,0.000057112415,0.00006359034,0.00008972757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034464104,0.0003388945,0.00037901386,0.001532504,0.000524154,0.0021414063,0.00036733152,0.0014378827,0.012388142],"category_scores_gemma":[0.0011086811,0.00019417575,0.00027638336,0.0011834139,0.0017656325,0.0025816949,0.001594858,0.0021267738,0.005466337],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031681213,0.000101670106,0.022424841,0.0012109914,0.00008987136,0.045187954,0.00074953365,0.00045554517,0.0096189855,0.19181469,0.08283798,0.64519113],"study_design_scores_gemma":[0.000025437846,0.0001322854,0.018143883,0.00048227224,0.00005094126,0.1886186,0.0005233788,0.0003535114,0.0014226537,0.06744333,0.7227686,0.000035160916],"about_ca_topic_score_codex":0.00033445808,"about_ca_topic_score_gemma":0.0005517224,"teacher_disagreement_score":0.012388142,"about_ca_system_score_codex":0.000578667,"about_ca_system_score_gemma":0.0006588343,"threshold_uncertainty_score":0.041442454},"labels":[],"label_agreement":null},{"id":"W4245820752","doi":"10.1038/s41379-020-0480-9","title":"Abstracts from USCAP 2020: Neuropathology and Ophthalmic Pathology (1697-1738)","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neurology and Historical Studies","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Neuropathology; Pathology; Medicine; Ophthalmic pathology; Neuro-ophthalmology; Ophthalmology; Disease; Glaucoma","score_opus":0.04707962058951323,"score_gpt":0.24673996418090513,"score_spread":0.1996603435913919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245820752","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027051908,0.051592458,0.0010455566,0.023828315,0.12835221,0.00096479367,0.04506674,0.0013510316,0.7450938],"genre_scores_gemma":[0.0044824877,0.020955564,0.0007481945,0.0051138476,0.03460947,0.0002775402,0.021365853,0.00034974792,0.9120973],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99924695,0.00007904029,0.00008147529,0.00007235831,0.00041343868,0.000106683685],"domain_scores_gemma":[0.99473685,0.00038037647,0.00028239182,0.00014839339,0.0032111274,0.0012409876],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012519921,0.0015752398,0.00082522765,0.0062921317,0.0013010374,0.003323396,0.0011108577,0.0032150215,0.48513263],"category_scores_gemma":[0.0028536832,0.000583769,0.0011223444,0.002763276,0.0004339075,0.0012501385,0.0022357607,0.001874729,0.30295303],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067639216,0.00002639699,0.00009042198,0.00014697106,0.0000045986726,0.000092510505,0.0000034538052,0.0000299467,0.00025279354,0.000110645735,0.9808796,0.018295007],"study_design_scores_gemma":[0.000038812337,0.00004449364,0.0020713797,0.00040457543,0.0000146723205,0.0002941272,0.000021039508,0.00006774908,0.000259201,0.00047422037,0.99629647,0.0000131812885],"about_ca_topic_score_codex":0.00957246,"about_ca_topic_score_gemma":0.019381987,"teacher_disagreement_score":0.48513263,"about_ca_system_score_codex":0.0018243983,"about_ca_system_score_gemma":0.0035169488,"threshold_uncertainty_score":0.7343958},"labels":[],"label_agreement":null},{"id":"W4246501537","doi":"10.1038/modpathol.2016.1","title":"Autopsy","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Autopsy Techniques and Outcomes","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Pathology; Medicine; Autopsy","score_opus":0.020218374594062605,"score_gpt":0.2952012864683675,"score_spread":0.2749829118743049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246501537","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05975223,0.0078104306,0.040496185,0.009417274,0.0055078347,0.0019173651,0.006838197,0.0021818473,0.86607873],"genre_scores_gemma":[0.31693563,0.013383404,0.049438372,0.0091508115,0.0047467896,0.00105575,0.01250394,0.00074384146,0.59204143],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988918,0.00024410155,0.00013979727,0.0001993806,0.00037012834,0.00015491627],"domain_scores_gemma":[0.99670225,0.00040323148,0.00025361156,0.00097272574,0.001294634,0.0003735557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020003982,0.0006420433,0.00031912906,0.0035300143,0.0016170494,0.001589265,0.0010337579,0.001022262,0.089332156],"category_scores_gemma":[0.007407129,0.0003297281,0.00064722676,0.0010162436,0.0008211249,0.0010262048,0.0020971599,0.0015035155,0.031574283],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041159667,0.0003474202,0.04157252,0.0007652678,0.00009505705,0.021416556,0.0020421706,0.00049220724,0.006053011,0.036817662,0.2921244,0.59786224],"study_design_scores_gemma":[0.000049806764,0.00014945927,0.019175656,0.0008852513,0.0000747358,0.0554362,0.0010000718,0.00033788587,0.0047707683,0.011468012,0.9066116,0.00004051023],"about_ca_topic_score_codex":0.0010773384,"about_ca_topic_score_gemma":0.0016444878,"teacher_disagreement_score":0.089332156,"about_ca_system_score_codex":0.0006387557,"about_ca_system_score_gemma":0.0027393522,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4246944530","doi":"10.1038/modpathol.2018.18","title":"USCAP 2018 Abstracts: Neuropathology and Ophthalmic Pathology (1812–1862)","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neurology and Historical Studies","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary; McGill University; PQ Corporation (Canada); Baker Hughes (Canada); Alberta Health Services","funders":"","keywords":"Temozolomide; Medicine; Biopsy; Context (archaeology); O-6-methylguanine-DNA methyltransferase; Ophthalmic pathology; ATRX; Internal medicine; Cohort; Surgical pathology; Stereotactic biopsy; Methyltransferase; Surgery; Pathology; Oncology; Methylation; Chemotherapy; Neuro-ophthalmology; Ophthalmology; Biology","score_opus":0.04158704283410686,"score_gpt":0.2679135994599933,"score_spread":0.22632655662588647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246944530","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036744215,0.031089397,0.0012711663,0.0209703,0.09845658,0.0004231202,0.008453563,0.0011331904,0.83452827],"genre_scores_gemma":[0.011077271,0.021363543,0.0009368512,0.0033458692,0.046886865,0.00019836782,0.0058831223,0.00042609597,0.9098821],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994363,0.00007939738,0.00008678624,0.0000858321,0.00022512225,0.00008649828],"domain_scores_gemma":[0.9970368,0.00024478693,0.0002494205,0.00020411793,0.0015849876,0.0006798885],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010182637,0.0014855653,0.000683592,0.006922426,0.002020318,0.0041179038,0.0011336731,0.0035089997,0.49136627],"category_scores_gemma":[0.0027504326,0.00050654757,0.0009674131,0.0031123443,0.0009749282,0.0032853992,0.002601158,0.0020755483,0.26086187],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009099762,0.000044178832,0.00032219998,0.0004337033,0.000013431357,0.0005253859,0.000017522903,0.00006499792,0.0007864801,0.0011889104,0.930857,0.06565503],"study_design_scores_gemma":[0.00001487862,0.000035536366,0.0015265596,0.00041052504,0.000010138483,0.0013633367,0.000036846723,0.00006173713,0.00034183465,0.0010969228,0.9950913,0.000010283617],"about_ca_topic_score_codex":0.002934275,"about_ca_topic_score_gemma":0.005666584,"teacher_disagreement_score":0.50863373,"about_ca_system_score_codex":0.0019490311,"about_ca_system_score_gemma":0.0022455503,"threshold_uncertainty_score":0.7255043},"labels":[],"label_agreement":null},{"id":"W4247001558","doi":"10.1038/modpathol.2013.24","title":"Pulmonary","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chronic Obstructive Pulmonary Disease (COPD) Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Pathology","score_opus":0.019561971073473104,"score_gpt":0.284803418945836,"score_spread":0.26524144787236287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247001558","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020322049,0.023238938,0.016284073,0.009923277,0.005829698,0.00041513052,0.0023933009,0.002451109,0.9191425],"genre_scores_gemma":[0.13517405,0.009026405,0.0056127207,0.007290955,0.0035744582,0.00018341489,0.0022192062,0.00038610937,0.8365327],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99938047,0.000072219605,0.000039059778,0.0001178416,0.00028132673,0.000109064065],"domain_scores_gemma":[0.99938595,0.00006606507,0.000045460576,0.00013695582,0.00021579405,0.00014968858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055921153,0.0004757983,0.00036855802,0.0011342355,0.0010073492,0.0021477574,0.0007489274,0.0011092182,0.159637],"category_scores_gemma":[0.0013785622,0.0002031285,0.00046738016,0.0005682952,0.00059282634,0.0008057154,0.0014818531,0.0013675597,0.07864817],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026995703,0.00026523875,0.007302481,0.0005832352,0.00004317488,0.0036732755,0.00044531105,0.00016977901,0.02796064,0.023161193,0.20463134,0.7314945],"study_design_scores_gemma":[0.000031428608,0.000100164354,0.007077375,0.00017407724,0.000024643248,0.007445266,0.00014126475,0.00016626986,0.0043345825,0.0029067558,0.97758454,0.000013598319],"about_ca_topic_score_codex":0.0014422279,"about_ca_topic_score_gemma":0.0016731094,"teacher_disagreement_score":0.159637,"about_ca_system_score_codex":0.0006301443,"about_ca_system_score_gemma":0.0012292279,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4247408782","doi":"10.1038/modpathol.2015.9","title":"Breast Pathology","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Royal Alexandra Hospital","funders":"","keywords":"Pathology; Medicine","score_opus":0.03710079753431281,"score_gpt":0.2700672301004115,"score_spread":0.2329664325660987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247408782","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06320762,0.039056513,0.029900208,0.027835352,0.0069760554,0.0006793949,0.016147887,0.007185695,0.80901134],"genre_scores_gemma":[0.42799476,0.024156222,0.040908333,0.019979155,0.004748694,0.00036194167,0.018796116,0.001163433,0.46189132],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9994134,0.00007496353,0.00004913575,0.000116401476,0.00025788863,0.000088269],"domain_scores_gemma":[0.9990096,0.00012860067,0.00010140276,0.00018010248,0.00040923187,0.00017112982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010127116,0.00061133853,0.00028565273,0.0018407807,0.00061409024,0.0014382032,0.00089104776,0.0009785197,0.123714335],"category_scores_gemma":[0.00206743,0.00021975717,0.0003601843,0.0011051212,0.0003420364,0.00053695386,0.0008534709,0.00080075744,0.076068014],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039818053,0.0001363022,0.02266429,0.00088867784,0.00008134585,0.012080227,0.00019170158,0.00035730342,0.017133549,0.0055653,0.23475224,0.70575094],"study_design_scores_gemma":[0.000057106034,0.00007283071,0.022305563,0.000524679,0.00007139588,0.070818976,0.00027341058,0.0005071863,0.006596168,0.005444219,0.89330375,0.00002481613],"about_ca_topic_score_codex":0.0012485826,"about_ca_topic_score_gemma":0.0015226383,"teacher_disagreement_score":0.123714335,"about_ca_system_score_codex":0.00077968324,"about_ca_system_score_gemma":0.0008111518,"threshold_uncertainty_score":0.4138657},"labels":[],"label_agreement":null},{"id":"W4247732446","doi":"10.1038/sj.modpathol.3801036","title":"Gynecologic","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Pathology; Medicine","score_opus":0.04854708230432188,"score_gpt":0.2632663030839774,"score_spread":0.21471922077965555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247732446","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80035913,0.030952908,0.00264625,0.0033901066,0.001032517,0.0010507741,0.013358304,0.00040277056,0.14680715],"genre_scores_gemma":[0.91800356,0.0073165777,0.0033351409,0.0042688847,0.00060454203,0.00032861737,0.0077884793,0.00010270164,0.058251616],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.999879,0.000014527097,0.000010424452,0.000032216038,0.000024373594,0.0000395115],"domain_scores_gemma":[0.9998547,0.00002251614,0.00003360313,0.000019593484,0.000024974344,0.000044534536],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013340653,0.0002667992,0.00027196293,0.0010400311,0.00077882106,0.0002710396,0.00018749344,0.000397783,0.031984173],"category_scores_gemma":[0.0006932767,0.000120062956,0.0002643021,0.0008897947,0.0002659492,0.00014927781,0.00043593862,0.0003266537,0.0063633295],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013419833,0.00048483905,0.50593525,0.0011714015,0.00010621258,0.12311449,0.0006925933,0.000635167,0.007553553,0.0030422753,0.080289125,0.27563304],"study_design_scores_gemma":[0.0002766829,0.0007986167,0.34779075,0.0004583643,0.00009039347,0.41550618,0.0011810389,0.0005310049,0.0024091597,0.0014108748,0.2295034,0.000043499756],"about_ca_topic_score_codex":0.0057825274,"about_ca_topic_score_gemma":0.010504509,"teacher_disagreement_score":0.96801585,"about_ca_system_score_codex":0.0007416886,"about_ca_system_score_gemma":0.0008358127,"threshold_uncertainty_score":0.10699773},"labels":[],"label_agreement":null},{"id":"W4247814196","doi":"10.1038/sj.modpathol.3800842","title":"Cytopathology","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Transplantation: Methods and Outcomes","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"CD59; Complement system; Decay-accelerating factor; CD46; Complement membrane attack complex; Pathology; Immunohistochemistry; Immunofluorescence; Biology; Complement factor I; Inflammation; Immunology; Antibody; Medicine","score_opus":0.016426107403063217,"score_gpt":0.29625343280565675,"score_spread":0.27982732540259353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247814196","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35050264,0.096708186,0.026213411,0.00893916,0.0039884695,0.0013671853,0.0041130665,0.0021597948,0.506008],"genre_scores_gemma":[0.87822366,0.015089143,0.004270701,0.0050276686,0.0012073575,0.00028620128,0.0028844639,0.0001734042,0.09283735],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995962,0.00008852501,0.000039919767,0.0000976662,0.00010011711,0.000077619756],"domain_scores_gemma":[0.99946076,0.000081876,0.00013038407,0.00012227909,0.0001258302,0.000078919875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037996747,0.00059791293,0.00032757025,0.0016456008,0.0005071186,0.0010821049,0.00042263255,0.0008065442,0.02899087],"category_scores_gemma":[0.001110332,0.00016879545,0.0003549659,0.00072129746,0.00087206333,0.00063843804,0.0006874796,0.0009725184,0.012247775],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022940466,0.00052458345,0.12609169,0.0020595102,0.00024132663,0.12108336,0.00086205907,0.0005370292,0.14678918,0.041120116,0.085359834,0.47303736],"study_design_scores_gemma":[0.0002220835,0.0004930806,0.09334742,0.00086543465,0.00010281413,0.4819804,0.000448412,0.00088313024,0.020313337,0.010678503,0.39062452,0.00004084561],"about_ca_topic_score_codex":0.0007077887,"about_ca_topic_score_gemma":0.0005631555,"teacher_disagreement_score":0.02899087,"about_ca_system_score_codex":0.00077973376,"about_ca_system_score_gemma":0.00046920322,"threshold_uncertainty_score":0.09698409},"labels":[],"label_agreement":null},{"id":"W4248142486","doi":"10.1038/sj.modpathol.3800876","title":"Gynecologic","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centre Hospitalier de l’Université de Montréal; University of Ottawa","funders":"","keywords":"Medicine; Pathology","score_opus":0.023860478610086975,"score_gpt":0.30514330037495435,"score_spread":0.28128282176486735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248142486","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02303898,0.026144853,0.0020398195,0.027577335,0.004779052,0.00031627665,0.005170244,0.0007365184,0.91019696],"genre_scores_gemma":[0.11686506,0.021495424,0.004335848,0.021681067,0.002615134,0.00020553387,0.004789532,0.00026317805,0.82774925],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99982184,0.000025445472,0.000009525377,0.000031976702,0.0000586099,0.000052641997],"domain_scores_gemma":[0.9997334,0.000035488854,0.000025648082,0.000040823743,0.000071236725,0.0000934529],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002496442,0.00038080857,0.00018538813,0.0011013608,0.0011138943,0.00077953987,0.00040910213,0.0007988662,0.14638634],"category_scores_gemma":[0.001057813,0.00016488187,0.00036122982,0.0006117658,0.00043376937,0.0002766934,0.0011044046,0.0010498401,0.041391492],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023810004,0.00016918925,0.014183966,0.0004624762,0.000033269844,0.006704488,0.00032843894,0.00020628687,0.006161605,0.009184189,0.48578876,0.47653925],"study_design_scores_gemma":[0.000028541164,0.000050254464,0.0057836855,0.000120574645,0.000012505389,0.0050551454,0.0001299904,0.000036872294,0.0007440081,0.0006653782,0.9873677,0.0000052759906],"about_ca_topic_score_codex":0.0060438314,"about_ca_topic_score_gemma":0.014577652,"teacher_disagreement_score":0.8536137,"about_ca_system_score_codex":0.001213444,"about_ca_system_score_gemma":0.0028695548,"threshold_uncertainty_score":0.4897111},"labels":[],"label_agreement":null},{"id":"W4248649630","doi":"10.1038/modpathol.2010.26","title":"Pediatrics","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Pathology","score_opus":0.013953940489458035,"score_gpt":0.29843035586004474,"score_spread":0.2844764153705867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248649630","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0054273466,0.008940027,0.0020235,0.011931996,0.009075634,0.0001299286,0.0012784114,0.00080958626,0.9603836],"genre_scores_gemma":[0.03135251,0.010146059,0.0024735457,0.0050953235,0.0029194395,0.00009197965,0.0011607796,0.00025811858,0.9465023],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99971324,0.000035115656,0.00001474318,0.00005685648,0.00012024848,0.000059728565],"domain_scores_gemma":[0.9992435,0.000066516615,0.000042340573,0.00006918679,0.00023686636,0.0003416693],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029302062,0.0006099711,0.0003060411,0.0012476922,0.0015292328,0.0012789718,0.0005107455,0.001027015,0.38057527],"category_scores_gemma":[0.0014317558,0.00025268205,0.0002811028,0.00075341424,0.00051967154,0.000767962,0.0014027482,0.0019420313,0.18193065],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005572298,0.00014446428,0.0036224658,0.00012279784,0.000009837914,0.0049571516,0.00010759576,0.000070579976,0.0016334555,0.012499898,0.7114048,0.26537114],"study_design_scores_gemma":[0.000009468207,0.0000242329,0.0018961001,0.00010581054,0.0000047910066,0.006818553,0.000072259405,0.000025876187,0.0004747127,0.0017582017,0.9888058,0.000004264128],"about_ca_topic_score_codex":0.0013042488,"about_ca_topic_score_gemma":0.0037772397,"teacher_disagreement_score":0.6194247,"about_ca_system_score_codex":0.0008415511,"about_ca_system_score_gemma":0.0017761016,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4248896311","doi":"10.1038/sj.modpathol.3800802","title":"Cytopathology","year":2007,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Cytopathology; Pathology; Medicine; Hematopathology; Biology; Cytology","score_opus":0.03510188936978177,"score_gpt":0.36661658664632985,"score_spread":0.3315146972765481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248896311","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.053832136,0.10138881,0.07213177,0.019238105,0.009391186,0.0022077982,0.013086325,0.008881163,0.71984273],"genre_scores_gemma":[0.37996382,0.051213823,0.064937085,0.020434324,0.0051830574,0.0016863552,0.022962924,0.002142243,0.45147637],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99778676,0.0003420471,0.00023372848,0.0005199911,0.0009039961,0.00021344921],"domain_scores_gemma":[0.99652267,0.0005824817,0.00031496503,0.0006510163,0.0016691881,0.00025975532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016138515,0.0009324903,0.00069415226,0.0040235464,0.0011856288,0.0028990004,0.0015524449,0.001689885,0.09731464],"category_scores_gemma":[0.0046631987,0.00047979984,0.00065316283,0.002312415,0.0012845907,0.0016235613,0.0022924752,0.0018221543,0.060945325],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000661458,0.00017518204,0.025857644,0.0025765703,0.00009620931,0.0067731803,0.00064152357,0.0003903451,0.046149235,0.01683149,0.20278773,0.6970594],"study_design_scores_gemma":[0.00006496934,0.00012107869,0.013170911,0.0008552476,0.000058726033,0.02309195,0.00028587412,0.0006693571,0.015148101,0.005431361,0.9410619,0.000040572024],"about_ca_topic_score_codex":0.0015353638,"about_ca_topic_score_gemma":0.0012119042,"teacher_disagreement_score":0.09731464,"about_ca_system_score_codex":0.0014742026,"about_ca_system_score_gemma":0.0016279598,"threshold_uncertainty_score":0.3255499},"labels":[],"label_agreement":null},{"id":"W4249816034","doi":"10.1038/s41379-020-0482-7","title":"Abstracts from USCAP 2020: Pancreas, Gallbladder, Ampulla, and Extra-Hepatic Biliary Tree (1739-1801)","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gallbladder and Bile Duct Disorders","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Gallbladder; Ampulla; Medicine; Ampulla of Vater; Pathology; General surgery; Anatomy; Internal medicine; Carcinoma","score_opus":0.019872867075751435,"score_gpt":0.24239363877492187,"score_spread":0.22252077169917045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249816034","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002844362,0.06467164,0.0007264843,0.028223015,0.15641269,0.0004188234,0.04648548,0.0008215937,0.69939584],"genre_scores_gemma":[0.008860183,0.02920818,0.0006414385,0.0061839186,0.0586232,0.00016601059,0.02439693,0.00028513055,0.8716351],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99952984,0.00004944606,0.000072004266,0.000062813895,0.00021134167,0.00007453128],"domain_scores_gemma":[0.9974446,0.00018987217,0.00019520707,0.0000652954,0.0013324611,0.0007724766],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00067781535,0.0013033976,0.0007693366,0.0033803373,0.000829326,0.002737339,0.0008956413,0.0022919604,0.41633686],"category_scores_gemma":[0.0019977344,0.00043961615,0.00086263777,0.0020554438,0.00046065313,0.0012010582,0.0018250063,0.0018002979,0.21773513],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009671462,0.000019728266,0.00025892022,0.00027635798,0.000006266387,0.00013800719,0.000004844293,0.000048790687,0.00021114828,0.00022892491,0.97032446,0.02838591],"study_design_scores_gemma":[0.000028491377,0.000028202201,0.0028382277,0.00037282635,0.000012203164,0.00028255355,0.000015821677,0.000043231354,0.0001623197,0.00027870273,0.99592847,0.000008981631],"about_ca_topic_score_codex":0.008478361,"about_ca_topic_score_gemma":0.01674015,"teacher_disagreement_score":0.41633686,"about_ca_system_score_codex":0.0018424374,"about_ca_system_score_gemma":0.0025511563,"threshold_uncertainty_score":0.83252466},"labels":[],"label_agreement":null},{"id":"W4249910663","doi":"10.1038/s41379-021-00941-4","title":"Correction to: Eosinophilic vacuolated tumor (EVT) of kidney demonstrates sporadic TSC/MTOR mutations: next-generation sequencing multi-institutional study of 19 cases","year":2021,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University; University of British Columbia; St. John’s Health Sciences Centre; University of Calgary","funders":"","keywords":"Eosinophilic; Pathology; Tuberous sclerosis; Biology; Hematopathology; Medicine; Genetics; Gene; Cytogenetics","score_opus":0.045558198819461306,"score_gpt":0.27780454720043635,"score_spread":0.23224634838097505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249910663","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022583136,0.0014783,0.0016629089,0.0696269,0.9185871,0.00006141253,0.0025592828,0.0005374321,0.003228365],"genre_scores_gemma":[0.11790016,0.01181651,0.022257973,0.119256094,0.5250691,0.00045382665,0.0072864527,0.003620517,0.19233939],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99843115,0.00021925058,0.00036249045,0.00033939464,0.00044211678,0.00020549675],"domain_scores_gemma":[0.99133015,0.0025977877,0.0007948217,0.0006095461,0.0037006538,0.00096701516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015871472,0.0016219065,0.0013440537,0.0024759856,0.0015081728,0.0017511585,0.0028656826,0.004690797,0.024352606],"category_scores_gemma":[0.02471882,0.0009298442,0.0009912353,0.0012153827,0.0014910734,0.0012656931,0.0011127165,0.006340201,0.010810761],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010774121,0.000016892744,0.0009398749,0.00034541724,0.000048849128,0.010038933,0.00008763484,0.0001467473,0.00027708587,0.0006780814,0.9756369,0.011675847],"study_design_scores_gemma":[0.0001554129,0.000064699474,0.0069820643,0.0007594302,0.00014945028,0.03343673,0.00033164027,0.0008264167,0.0013847757,0.002085405,0.95369655,0.00012749253],"about_ca_topic_score_codex":0.0086912345,"about_ca_topic_score_gemma":0.009286592,"teacher_disagreement_score":0.024352606,"about_ca_system_score_codex":0.0017014076,"about_ca_system_score_gemma":0.0021193528,"threshold_uncertainty_score":0.08146757},"labels":[],"label_agreement":null},{"id":"W4250263332","doi":"10.1038/modpathol.2016.5","title":"Cytopathology","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; University of Calgary; Calgary Laboratory Services","funders":"","keywords":"Cytopathology; Pathology; Medicine; Hematopathology; Biology; Cytology","score_opus":0.03559727133663933,"score_gpt":0.3348287518395554,"score_spread":0.2992314805029161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250263332","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.085080616,0.04507521,0.09286829,0.012789351,0.0070669325,0.0038611821,0.008161749,0.0081774285,0.7369193],"genre_scores_gemma":[0.35057232,0.025705693,0.1296829,0.016819151,0.004710143,0.0023548233,0.012864908,0.0022091276,0.45508093],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99848807,0.00027269233,0.00017787685,0.00031858383,0.00058151066,0.0001613833],"domain_scores_gemma":[0.9971616,0.00042660654,0.00016379036,0.0008014041,0.0011900347,0.000256513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017529783,0.00078617485,0.00050635275,0.007542168,0.0017682288,0.002103442,0.0013461323,0.0016617435,0.08652995],"category_scores_gemma":[0.0041248673,0.0006169945,0.0009143257,0.002172916,0.0014321151,0.0011920962,0.0019290531,0.0019484413,0.039112523],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006420281,0.00031262272,0.062071737,0.002180876,0.00015958071,0.01692579,0.0015769742,0.00027125695,0.18590713,0.023268213,0.14225027,0.56443363],"study_design_scores_gemma":[0.00006223343,0.00018853165,0.024421426,0.0009686975,0.000093987685,0.04911678,0.00062334555,0.0005925505,0.048911236,0.0070546553,0.86791223,0.000054267653],"about_ca_topic_score_codex":0.00094947167,"about_ca_topic_score_gemma":0.0015037927,"teacher_disagreement_score":0.08652995,"about_ca_system_score_codex":0.0007546415,"about_ca_system_score_gemma":0.0018356572,"threshold_uncertainty_score":0.2894715},"labels":[],"label_agreement":null},{"id":"W4250609003","doi":"10.1038/modpathol.2018.11","title":"USCAP 2018 Abstracts: Gynecologic and Obstetric Pathology (1127–1316)","year":2018,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Vancouver General Hospital; BC Cancer Agency","funders":"","keywords":"Medicine; Pathology; Gynecology; Medical physics","score_opus":0.02584234786166811,"score_gpt":0.278506852480803,"score_spread":0.25266450461913487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250609003","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021403788,0.047590017,0.003827946,0.012361335,0.015529403,0.0008897376,0.02662848,0.002355826,0.8694135],"genre_scores_gemma":[0.07079685,0.03719051,0.004897754,0.0035945757,0.015357722,0.0006331764,0.036135864,0.0009170888,0.8304764],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999419,0.00009965027,0.000097280805,0.00012583227,0.00017587682,0.0000824043],"domain_scores_gemma":[0.9979607,0.00023769094,0.00019949838,0.00015619105,0.0008115168,0.00063445634],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010431986,0.0009192208,0.00053049286,0.0046419343,0.00079427427,0.0021005045,0.0009277058,0.0015434508,0.5003793],"category_scores_gemma":[0.0015614525,0.00034657642,0.00048992597,0.0026237522,0.0006687861,0.0011245362,0.0015262455,0.0010509804,0.25681975],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034223398,0.00018698799,0.0054508937,0.0013579783,0.000047115525,0.0022759822,0.000060128896,0.00018757238,0.0040566674,0.0018515203,0.6558391,0.32834396],"study_design_scores_gemma":[0.000036431346,0.00008000636,0.0097931465,0.0006671439,0.000019579531,0.004706593,0.000067348716,0.00017234976,0.0011892433,0.00073554134,0.98251975,0.000012904898],"about_ca_topic_score_codex":0.00092654687,"about_ca_topic_score_gemma":0.0012532288,"teacher_disagreement_score":0.49962068,"about_ca_system_score_codex":0.0010874636,"about_ca_system_score_gemma":0.0011484317,"threshold_uncertainty_score":0.7126483},"labels":[],"label_agreement":null},{"id":"W4250963093","doi":"10.1038/modpathol.3880718","title":"Announcements","year":2003,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Medical Case Reports and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Pathology","score_opus":0.03665187872286351,"score_gpt":0.3005073025610943,"score_spread":0.2638554238382308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250963093","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021589897,0.0026913323,0.0010234286,0.24911405,0.416392,0.00058553217,0.0047717295,0.0017103814,0.32155263],"genre_scores_gemma":[0.0059655956,0.0006179764,0.00043801955,0.068499215,0.048011336,0.00014386995,0.0012757559,0.0002446337,0.8748036],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99859697,0.0001730922,0.000058991594,0.00018015552,0.0007239125,0.00026684412],"domain_scores_gemma":[0.9937133,0.00110355,0.00027719265,0.00043309288,0.0020295086,0.0024433315],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0018402736,0.00066172646,0.0006551501,0.0012909245,0.0017171288,0.0030133445,0.0014954382,0.0069079064,0.3384874],"category_scores_gemma":[0.011158547,0.00033616944,0.00084328686,0.00055787555,0.000554983,0.0008551035,0.0014770087,0.005308921,0.19560625],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006686859,0.0000140124475,0.00010064073,0.00001964647,0.0000016917888,0.00014623547,0.00000614197,0.0000116636065,0.00010480251,0.00044754322,0.99377704,0.005303723],"study_design_scores_gemma":[0.000031078915,0.000033543,0.00074883935,0.000025348194,0.000004458203,0.00018241355,0.000042997715,0.000058570877,0.00018062447,0.00057394785,0.99810946,0.000008680439],"about_ca_topic_score_codex":0.002790474,"about_ca_topic_score_gemma":0.007204916,"teacher_disagreement_score":0.6615126,"about_ca_system_score_codex":0.0014190375,"about_ca_system_score_gemma":0.0019150914,"threshold_uncertainty_score":0.94356745},"labels":[],"label_agreement":null},{"id":"W4252237252","doi":"10.1038/sj.modpathol.3800904","title":"Autopsy","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Autopsy Techniques and Outcomes","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Pathology; Medicine; Autopsy","score_opus":0.01900281677509417,"score_gpt":0.30394718772910134,"score_spread":0.28494437095400715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252237252","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.045552105,0.006981252,0.043681648,0.008387638,0.0047005694,0.0016965469,0.0052254805,0.002227314,0.88154733],"genre_scores_gemma":[0.24370588,0.011025543,0.05178233,0.007822218,0.0040400224,0.00091966795,0.009223908,0.00070919615,0.67077124],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99895006,0.00023404317,0.00012390432,0.00019625002,0.00035778718,0.00013805872],"domain_scores_gemma":[0.9972765,0.00033615442,0.00019117078,0.0008529359,0.0010564307,0.00028686065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020176577,0.0006552512,0.00032524727,0.003450689,0.0015863585,0.0015742367,0.0010066504,0.0010341973,0.09552067],"category_scores_gemma":[0.0064236056,0.0003609097,0.00064340286,0.000934406,0.00078242185,0.0009834728,0.0019661542,0.0014698949,0.034477573],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037859575,0.00030606275,0.026692964,0.00059854664,0.000082256105,0.017190479,0.0016721339,0.00044373315,0.007323675,0.038246464,0.2817719,0.6252932],"study_design_scores_gemma":[0.000042762822,0.00013086745,0.013267231,0.0006044539,0.0000638693,0.04795267,0.00069082144,0.00030721715,0.005196687,0.010026734,0.92168415,0.000032518343],"about_ca_topic_score_codex":0.00091768196,"about_ca_topic_score_gemma":0.0015966714,"teacher_disagreement_score":0.09552067,"about_ca_system_score_codex":0.0006176411,"about_ca_system_score_gemma":0.0024441157,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4252615877","doi":"10.1038/modpathol.2016.256","title":"Kidney/Renal Pathology (including Transplantation)","year":2017,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Organ Donation and Transplantation","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Renal pathology; Pathology; Medicine; Transplantation; Kidney; Kidney transplantation; Internal medicine","score_opus":0.040489711716443874,"score_gpt":0.31485584184747034,"score_spread":0.27436613013102645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252615877","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06051975,0.11533362,0.0070426087,0.019135645,0.01716293,0.00022240188,0.0018237676,0.0006476045,0.7781116],"genre_scores_gemma":[0.5213601,0.15137146,0.017808896,0.01904305,0.047217436,0.00018194884,0.0028195735,0.00038812842,0.2398094],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993298,0.00010145905,0.00009131198,0.00009639262,0.00020951392,0.00017162388],"domain_scores_gemma":[0.999318,0.00009419577,0.000116506075,0.00009532911,0.00013711677,0.00023887743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077108084,0.00046470668,0.00047530487,0.0020952069,0.0013329491,0.0016950817,0.00051242934,0.00096964807,0.034961686],"category_scores_gemma":[0.0014380511,0.0001545883,0.00075323513,0.0015481779,0.0012387814,0.0012294807,0.0019183608,0.0013698152,0.012742986],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021228986,0.00037201398,0.05251079,0.0022159382,0.00015741386,0.023518026,0.00063236407,0.00038725766,0.006470571,0.046750184,0.1828082,0.6839649],"study_design_scores_gemma":[0.00001938498,0.0001875281,0.055281557,0.0011164194,0.00010179597,0.09804338,0.0005366948,0.00014090391,0.0026595267,0.01721091,0.8246585,0.00004340649],"about_ca_topic_score_codex":0.0009005994,"about_ca_topic_score_gemma":0.0021197088,"teacher_disagreement_score":0.034961686,"about_ca_system_score_codex":0.0006390282,"about_ca_system_score_gemma":0.002512571,"threshold_uncertainty_score":0.11695844},"labels":[],"label_agreement":null},{"id":"W4253204157","doi":"10.1038/modpathol.2008.220","title":"Hematopathology","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Hematological disorders and diagnostics","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Hematopathology; Pathology; Medicine; Biology","score_opus":0.018576932859311942,"score_gpt":0.289928192904136,"score_spread":0.27135126004482407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253204157","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024956405,0.03147984,0.016989924,0.0157383,0.0060619027,0.00021147255,0.0007852028,0.0017580043,0.9020189],"genre_scores_gemma":[0.20228443,0.021510782,0.016631199,0.008721732,0.00686301,0.00011014508,0.0013077926,0.0003927754,0.74217814],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997265,0.00005107149,0.000018643595,0.000051267907,0.000103743834,0.000048775863],"domain_scores_gemma":[0.9995534,0.000061131774,0.00003561305,0.00013328118,0.0001304342,0.000086105916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004278141,0.00037270857,0.00021597887,0.0018624982,0.001068088,0.0016458983,0.0005690039,0.0010015683,0.08268647],"category_scores_gemma":[0.0009485761,0.00022689144,0.00029038888,0.0009331725,0.0010785209,0.00089027296,0.0012560071,0.0013825374,0.026556289],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000165015,0.00011681078,0.008408993,0.00045941718,0.000040694806,0.010613831,0.00061163626,0.0001465732,0.026646793,0.09197778,0.26085952,0.599953],"study_design_scores_gemma":[0.000009173843,0.000018606119,0.0027724134,0.00009636213,0.000013803942,0.021268016,0.000094040886,0.000087839435,0.00453776,0.008800492,0.9622954,0.0000060981083],"about_ca_topic_score_codex":0.0005509426,"about_ca_topic_score_gemma":0.0010025492,"teacher_disagreement_score":0.08268647,"about_ca_system_score_codex":0.0008175954,"about_ca_system_score_gemma":0.00089143164,"threshold_uncertainty_score":0.27661377},"labels":[],"label_agreement":null},{"id":"W4253286826","doi":"10.1038/modpathol.2008.219","title":"Head &amp; Neck","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Dupuytren's Contracture and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Head and neck; Medicine; Anatomy; Pathology; Surgery","score_opus":0.02484054491205436,"score_gpt":0.322970495424475,"score_spread":0.29812995051242064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253286826","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010221152,0.0062280903,0.001674821,0.008281423,0.0063088774,0.00018538108,0.0017863265,0.0004963099,0.9648175],"genre_scores_gemma":[0.049672097,0.006143264,0.0022497508,0.0046782927,0.0025928528,0.00012553751,0.00059819734,0.00024804927,0.933692],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997845,0.000013764122,0.0000124174985,0.00003951779,0.00008757093,0.000062156214],"domain_scores_gemma":[0.9997063,0.00003990769,0.000023848474,0.00003817847,0.00010178662,0.00008995824],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016570713,0.00083502225,0.00048932206,0.0011911767,0.0020976777,0.0011253356,0.0007951016,0.0018306107,0.41339487],"category_scores_gemma":[0.0010083849,0.00031002707,0.00058206584,0.0006800522,0.0010094994,0.0014450867,0.0015021698,0.0016444386,0.16471489],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018756116,0.00012320145,0.0058843903,0.0006431201,0.00003805452,0.06067705,0.0002832932,0.00032218822,0.01074504,0.009406402,0.50629526,0.4053945],"study_design_scores_gemma":[0.000017606164,0.000082845945,0.010421588,0.00040644218,0.000025936235,0.05140169,0.00040020898,0.00014316216,0.0015067977,0.003338453,0.9322282,0.000027083264],"about_ca_topic_score_codex":0.007867683,"about_ca_topic_score_gemma":0.01911618,"teacher_disagreement_score":0.58660513,"about_ca_system_score_codex":0.0008879801,"about_ca_system_score_gemma":0.0015148787,"threshold_uncertainty_score":0.836721},"labels":[],"label_agreement":null},{"id":"W4254197201","doi":"10.1038/sj.modpathol.3801041","title":"Liver &amp; Pancreas","year":2008,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Pancreas; Pathology; Medicine; Internal medicine","score_opus":0.04493756198029799,"score_gpt":0.27041258494919945,"score_spread":0.22547502296890146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254197201","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24529092,0.03737588,0.01745407,0.010798752,0.0027255912,0.0004842929,0.009696229,0.0033346638,0.67283964],"genre_scores_gemma":[0.57070184,0.008921804,0.012538648,0.0050523602,0.0012756758,0.0004608117,0.007337756,0.00047382936,0.39323732],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99971944,0.00006440432,0.000027229937,0.00007331995,0.000058249745,0.000057422294],"domain_scores_gemma":[0.9994815,0.000071283874,0.00007857643,0.00011765968,0.0000491926,0.00020184011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004445151,0.0005730693,0.00037715814,0.0010444759,0.0008559949,0.0010753947,0.00042202705,0.00060177944,0.15736423],"category_scores_gemma":[0.0008720106,0.0002379325,0.00037727595,0.0007450088,0.00047214708,0.00081267866,0.0011590084,0.0009154811,0.06777641],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002021731,0.00036918666,0.054142416,0.0010171343,0.0001827575,0.022625268,0.00020720142,0.0005031901,0.022565184,0.0071696346,0.07908046,0.81011593],"study_design_scores_gemma":[0.00040941598,0.0016492164,0.12463387,0.00084758556,0.00016425665,0.24595703,0.00051184266,0.0013375824,0.013451475,0.007275931,0.6036779,0.000083928186],"about_ca_topic_score_codex":0.00044684153,"about_ca_topic_score_gemma":0.0008461762,"teacher_disagreement_score":0.15736423,"about_ca_system_score_codex":0.0005814157,"about_ca_system_score_gemma":0.00043785438,"threshold_uncertainty_score":0.52643585},"labels":[],"label_agreement":null},{"id":"W4254268078","doi":"10.1038/modpathol.2014.11","title":"Education","year":2014,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Pathology; Medicine","score_opus":0.009809382658073152,"score_gpt":0.25551149143467206,"score_spread":0.2457021087765989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254268078","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006236045,0.0011407825,0.0042249383,0.04483381,0.0076076607,0.00030922002,0.0008147445,0.0010329589,0.93379986],"genre_scores_gemma":[0.009956616,0.0005624469,0.0013002927,0.006894504,0.0007265274,0.00009412859,0.0003136537,0.00008758067,0.9800642],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989793,0.00016518074,0.00003932699,0.00012498093,0.00043140774,0.00025975108],"domain_scores_gemma":[0.99341714,0.0004930095,0.0002082765,0.0004455673,0.0018636404,0.00357234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013317519,0.0006430516,0.0003212071,0.0012868072,0.0019770495,0.0040090308,0.0011106678,0.0019630624,0.571136],"category_scores_gemma":[0.0062641087,0.0002652437,0.00036811276,0.0005378139,0.00068680703,0.0020045254,0.0037582603,0.0027374562,0.31305632],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037176476,0.00049217185,0.0013348656,0.00009512967,0.0000021446797,0.00012411828,0.0004425601,0.00007528355,0.0005620905,0.008742099,0.77214086,0.21595152],"study_design_scores_gemma":[0.000010366636,0.000040687122,0.0015426818,0.00008641439,0.0000018793218,0.0001922645,0.00043576298,0.0000886349,0.00024095259,0.0025041546,0.9948514,0.000004870473],"about_ca_topic_score_codex":0.0018694192,"about_ca_topic_score_gemma":0.006176088,"teacher_disagreement_score":0.571136,"about_ca_system_score_codex":0.0018281832,"about_ca_system_score_gemma":0.006886301,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4254645728","doi":"10.1038/modpathol.2015.11","title":"Cytopathology","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Saint-Luc","funders":"","keywords":"Cytopathology; Pathology; Hematopathology; Medicine; Biology; Cytology","score_opus":0.11423636536296804,"score_gpt":0.37827661219500747,"score_spread":0.2640402468320394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254645728","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0843981,0.04362505,0.09575773,0.012581589,0.0068343263,0.0038293318,0.0079622995,0.008346941,0.73666465],"genre_scores_gemma":[0.34557787,0.025202759,0.13473393,0.016695509,0.0044992943,0.002344291,0.012716417,0.0022048932,0.45602503],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984913,0.00027141077,0.00017623516,0.00031763045,0.0005820918,0.00016131459],"domain_scores_gemma":[0.9971649,0.00042753617,0.00016248092,0.0008024537,0.0011867146,0.0002559018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017733511,0.00077669736,0.0005021158,0.0074602305,0.0017654528,0.0020861896,0.0013346685,0.0016456987,0.08695146],"category_scores_gemma":[0.0040769354,0.0006205666,0.0009137083,0.0021635725,0.0014315635,0.0011952063,0.001937103,0.0019677642,0.03877199],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006317593,0.00030685283,0.060074054,0.002149862,0.0001585722,0.016175576,0.0015731853,0.00027001707,0.19077058,0.024531707,0.14372456,0.5596334],"study_design_scores_gemma":[0.000061547704,0.0001892248,0.024197685,0.00094766734,0.0000927225,0.048159473,0.00061662355,0.0005969816,0.04964309,0.0071718115,0.8682691,0.00005415713],"about_ca_topic_score_codex":0.0009255969,"about_ca_topic_score_gemma":0.0014988763,"teacher_disagreement_score":0.08695146,"about_ca_system_score_codex":0.0007464215,"about_ca_system_score_gemma":0.0018243628,"threshold_uncertainty_score":0.29088163},"labels":[],"label_agreement":null},{"id":"W4255261866","doi":"10.1038/modpathol.2010.11","title":"Dermatopathology","year":2010,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Queen's University; University Health Network; Centre Hospitalier Universitaire Sainte-Justine; Sunnybrook Health Science Centre","funders":"","keywords":"Dermatopathology; Pathology; Medicine; Dermatology","score_opus":0.009939364195758723,"score_gpt":0.2510321872816788,"score_spread":0.2410928230859201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255261866","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016981145,0.035010066,0.0066431933,0.009409287,0.005549786,0.00024218677,0.0032288244,0.0014527438,0.9214827],"genre_scores_gemma":[0.15750892,0.02599105,0.0065003876,0.010261891,0.0030252133,0.00017506679,0.005187478,0.00045082616,0.79089916],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996797,0.00004603016,0.000026906726,0.00006957994,0.000099288794,0.000078575824],"domain_scores_gemma":[0.99966514,0.000034714412,0.000038546692,0.000052137755,0.000118442535,0.00009102843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002783487,0.0006590607,0.00036655267,0.001552458,0.0010179431,0.0016202534,0.0007885687,0.0013305455,0.23174937],"category_scores_gemma":[0.0007398588,0.00019697248,0.00039547659,0.0011119662,0.0005787762,0.0010209886,0.0013069347,0.0013243248,0.1082306],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025114615,0.00017797468,0.006389655,0.0014324631,0.000038048416,0.01636183,0.0003741667,0.00025299934,0.0073632696,0.026317904,0.3364752,0.60456544],"study_design_scores_gemma":[0.00002116014,0.00003517022,0.0027749632,0.00046132144,0.000014609724,0.03789176,0.00018865043,0.00013638248,0.0011523234,0.0044361786,0.95287734,0.000010150112],"about_ca_topic_score_codex":0.0014382915,"about_ca_topic_score_gemma":0.0017558677,"teacher_disagreement_score":0.23174937,"about_ca_system_score_codex":0.0010258275,"about_ca_system_score_gemma":0.00081103394,"threshold_uncertainty_score":0.77527887},"labels":[],"label_agreement":null},{"id":"W4255804705","doi":"10.1038/modpathol.2010.178","title":"International Society of Urological Pathology (ISUP) Consensus Conference on Handling and Staging of Radical Prostatectomy Specimens. Working group 1: specimen handling","year":2010,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":259,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; McMaster University; University of Toronto","funders":"","keywords":"Prostatectomy; Medicine; Prostate; Urology; Pathology; Consensus conference; Internal medicine","score_opus":0.08356315343935279,"score_gpt":0.3370806982929712,"score_spread":0.25351754485361844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255804705","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003692908,0.9877318,0.0013962871,0.0030801054,0.0018927649,0.00016389658,0.00025231752,0.00005081295,0.0050626895],"genre_scores_gemma":[0.001093533,0.99224806,0.0030558868,0.0010347727,0.00039607935,0.00009965504,0.0006339189,0.000011522681,0.0014265787],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99801433,0.0004518117,0.00041533195,0.0001396393,0.0008614101,0.00011751375],"domain_scores_gemma":[0.9948508,0.0013355153,0.0007715347,0.00014684889,0.0026770912,0.00021816079],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007875674,0.001261896,0.0020763257,0.0060129557,0.0006550923,0.0012827659,0.0035083445,0.0016407282,0.003578629],"category_scores_gemma":[0.005205764,0.0006813412,0.0012127201,0.0041501382,0.0010848555,0.0019417966,0.0015313915,0.0025381697,0.0030121643],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008264473,0.00006197825,0.00053588854,0.020848934,0.000082816965,0.00020466943,0.0000963164,0.00019993856,0.0012738409,0.001136758,0.10081374,0.8746624],"study_design_scores_gemma":[0.00002994177,0.000083649495,0.0027174533,0.015232653,0.00022908786,0.0019573444,0.00015553621,0.00008967797,0.0011562725,0.0008522043,0.977464,0.000032185355],"about_ca_topic_score_codex":0.007171665,"about_ca_topic_score_gemma":0.013036672,"teacher_disagreement_score":0.007875674,"about_ca_system_score_codex":0.0017203374,"about_ca_system_score_gemma":0.008940975,"threshold_uncertainty_score":0.04165107},"labels":[],"label_agreement":null},{"id":"W4256474450","doi":"10.1038/sj.modpathol.3800846","title":"Genitourinary","year":2006,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Pediatric Urology and Nephrology Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Genitourinary system; Medicine; Pathology; Anatomy","score_opus":0.00941098326029452,"score_gpt":0.23689728513419614,"score_spread":0.22748630187390162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256474450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9757696,0.001703763,0.0013455207,0.00042777197,0.00010055499,0.000108293316,0.0007092962,0.000044305863,0.019790977],"genre_scores_gemma":[0.99002504,0.000358574,0.00057410647,0.00038928632,0.00003139637,0.000041466606,0.00042592947,0.000018470373,0.008135712],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99985397,0.00002827011,0.000011550682,0.00003435759,0.000029883573,0.0000418993],"domain_scores_gemma":[0.99982905,0.00004583478,0.00003737755,0.000020253177,0.000016621278,0.00005083405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019193903,0.00015771498,0.00019031439,0.00030400982,0.00034326466,0.00019328154,0.00009041859,0.00018571419,0.011859082],"category_scores_gemma":[0.000749345,0.000099638964,0.0003233856,0.0002512328,0.0002922648,0.00014837865,0.00043021925,0.00026011153,0.0010758588],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012502575,0.0002879615,0.80247235,0.00043996432,0.00012106169,0.015078305,0.00071870507,0.0005980083,0.016776796,0.0009966125,0.0030605716,0.15819936],"study_design_scores_gemma":[0.00009849376,0.00323023,0.8301541,0.00013244282,0.00019616293,0.10830017,0.00085307675,0.0014491376,0.011603581,0.0009181013,0.043043174,0.000021352225],"about_ca_topic_score_codex":0.0014633462,"about_ca_topic_score_gemma":0.0039710095,"teacher_disagreement_score":0.011859082,"about_ca_system_score_codex":0.0004195167,"about_ca_system_score_gemma":0.0004370233,"threshold_uncertainty_score":0.039672613},"labels":[],"label_agreement":null},{"id":"W4256543759","doi":"10.1038/s41379-019-0231-y","title":"Abstracts from USCAP 2019: Pancreas, Gallbladder, Ampulla, and Extra-Hepatic Biliary Tree (1667-1734)","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gallbladder and Bile Duct Disorders","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Centre for Health Evaluation and Outcome Sciences; University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Gallbladder; Ampulla; Ampulla of Vater; Medicine; General surgery; Pathology; Anatomy; Internal medicine; Carcinoma","score_opus":0.011298053690984956,"score_gpt":0.23683324980423986,"score_spread":0.2255351961132549,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256543759","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0024118414,0.060218964,0.0009841091,0.032842647,0.14388053,0.00054817216,0.041179884,0.0011138975,0.71682],"genre_scores_gemma":[0.0075196302,0.027449038,0.00073958124,0.006388321,0.06659305,0.0001687202,0.022741845,0.00032057893,0.86807925],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994235,0.000072207156,0.00009724971,0.00006985888,0.0002475933,0.00008971118],"domain_scores_gemma":[0.99662834,0.00030328543,0.0002849706,0.00009788123,0.0016723872,0.0010130581],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00070682954,0.0013287131,0.0009352998,0.0040347804,0.00095297,0.0030773762,0.0009753114,0.0024984826,0.5289848],"category_scores_gemma":[0.002384987,0.00050806836,0.001048361,0.0024149076,0.00047440775,0.0014279431,0.0019260976,0.001923559,0.31650138],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088135006,0.000019212865,0.00024157546,0.00029365983,0.000007029278,0.0001600276,0.000004437718,0.000038836562,0.00019256624,0.00016477615,0.967672,0.031117937],"study_design_scores_gemma":[0.000036246423,0.000033264125,0.002801676,0.0005530987,0.000015170703,0.0004174821,0.000021314027,0.00005078499,0.00017650773,0.00033458232,0.99554896,0.000010840378],"about_ca_topic_score_codex":0.0056035975,"about_ca_topic_score_gemma":0.012953255,"teacher_disagreement_score":0.47101521,"about_ca_system_score_codex":0.0015861252,"about_ca_system_score_gemma":0.0022037232,"threshold_uncertainty_score":0.67184603},"labels":[],"label_agreement":null},{"id":"W4256656062","doi":"10.1038/modpathol.2008.231","title":"Special Category - Pan-genomic/Pan-proteomic Approaches to Cancer","year":2009,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pathology; Cancer; Computational biology; Hematopathology; Biology; Medicine; Genetics; Gene; Cytogenetics","score_opus":0.03770982111410691,"score_gpt":0.2481825862079358,"score_spread":0.2104727650938289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256656062","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10257397,0.14533085,0.33180746,0.029734828,0.060496155,0.0013698324,0.0021225458,0.008837367,0.3177271],"genre_scores_gemma":[0.41104499,0.056019034,0.19353719,0.006541373,0.03739032,0.0008137948,0.003633133,0.0012975719,0.28972253],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9982133,0.0005078804,0.00018462066,0.0002972178,0.00060759246,0.00018944923],"domain_scores_gemma":[0.99816835,0.00038987523,0.000120560966,0.00044690233,0.0005518065,0.00032259757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024413618,0.0008261824,0.0009913609,0.003594149,0.0010260454,0.001910035,0.0012475045,0.0014693625,0.03134992],"category_scores_gemma":[0.002097617,0.00034540103,0.0006969549,0.0016994464,0.0012147467,0.0020480207,0.002197069,0.0011645433,0.006083729],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005046697,0.00017845254,0.009560872,0.0018959425,0.00016128365,0.0025531973,0.0005737371,0.0005974405,0.04759881,0.035475504,0.20866293,0.6922371],"study_design_scores_gemma":[0.000034173037,0.0003370134,0.020144647,0.00032176464,0.00011920829,0.031059053,0.0005648716,0.0037986832,0.02013179,0.033285927,0.8901349,0.00006799834],"about_ca_topic_score_codex":0.000645298,"about_ca_topic_score_gemma":0.0025724666,"teacher_disagreement_score":0.03134992,"about_ca_system_score_codex":0.0010521795,"about_ca_system_score_gemma":0.00093587884,"threshold_uncertainty_score":0.10487598},"labels":[],"label_agreement":null},{"id":"W4256661760","doi":"10.1038/modpathol.2013.8","title":"Endocrine","year":2013,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Adrenal Hormones and Disorders","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; Memorial University of Newfoundland","funders":"","keywords":"Pathology; Medicine; Endocrine system; Internal medicine; Hormone","score_opus":0.01086707047861915,"score_gpt":0.24905804617747448,"score_spread":0.23819097569885533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256661760","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008554637,0.02911335,0.010978811,0.008641884,0.006678599,0.000119890996,0.0019192597,0.0012898572,0.93270385],"genre_scores_gemma":[0.06306133,0.019896906,0.005919438,0.0042426996,0.003393294,0.00007648637,0.0015118192,0.0002674221,0.9016306],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996288,0.000054053195,0.000021915954,0.000082172795,0.00016042659,0.000052678985],"domain_scores_gemma":[0.9994598,0.000057487807,0.000030275867,0.0001281981,0.00018951042,0.00013463828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058898027,0.0005971453,0.00031537106,0.0012866969,0.0009385536,0.002093679,0.00074777106,0.0009066456,0.15532891],"category_scores_gemma":[0.0011800415,0.00023062761,0.00036298973,0.0009356211,0.0010417908,0.0008928954,0.0015621039,0.0013620594,0.07652382],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003512918,0.00012747887,0.0030462428,0.00057625637,0.00003458689,0.0025034065,0.0007234591,0.00020135424,0.028045753,0.075426735,0.26698616,0.62197727],"study_design_scores_gemma":[0.000010810691,0.000042775464,0.0021615345,0.00006823334,0.000009817371,0.0023417731,0.00012839906,0.000036915364,0.0020513749,0.004204617,0.9889359,0.000007841391],"about_ca_topic_score_codex":0.001503406,"about_ca_topic_score_gemma":0.0016797091,"teacher_disagreement_score":0.15532891,"about_ca_system_score_codex":0.00083751685,"about_ca_system_score_gemma":0.001307043,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4256732999","doi":"10.1038/s41379-020-0485-4","title":"Abstracts from USCAP 2020: Pulmonary, Mediastinum, Pleura, and Peritoneum Pathology (1869-1980)","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Medical History and Innovations","field":"Arts and Humanities","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"","keywords":"Peritoneum; Medicine; Pathology; Mediastinum; Pulmonary pathology; Anatomy; Tuberculosis","score_opus":0.04197372238237591,"score_gpt":0.22008759371260994,"score_spread":0.17811387133023404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256732999","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0042511127,0.26945865,0.0007061113,0.032252777,0.19627097,0.00036964664,0.084022604,0.00062230194,0.4120458],"genre_scores_gemma":[0.015898462,0.10915995,0.0011523498,0.0060128937,0.078732975,0.0002600228,0.035323076,0.00022558395,0.7532346],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992161,0.0000843653,0.0000843357,0.0000849482,0.00041792644,0.00011227556],"domain_scores_gemma":[0.9960901,0.00032359204,0.0002947444,0.00010449132,0.0023869618,0.00080007163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012968391,0.0014273002,0.0006282087,0.008314764,0.0011857687,0.0026185936,0.0011160409,0.001555947,0.16871156],"category_scores_gemma":[0.0031396064,0.0003656996,0.0006152109,0.005808945,0.00068492815,0.0015970508,0.0022590766,0.0013786106,0.056151878],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005752834,0.000012458653,0.00024777354,0.0003208193,0.0000041349913,0.00005669276,0.000020294026,0.00004853621,0.00011987638,0.00032122893,0.97412926,0.024661332],"study_design_scores_gemma":[0.000008499173,0.000014218567,0.0037199948,0.00043445878,0.000008719748,0.00012174812,0.000042115407,0.000021761889,0.0001457743,0.00029528828,0.9951816,0.0000057141892],"about_ca_topic_score_codex":0.021891706,"about_ca_topic_score_gemma":0.042016014,"teacher_disagreement_score":0.16871156,"about_ca_system_score_codex":0.003492354,"about_ca_system_score_gemma":0.0045645256,"threshold_uncertainty_score":0.5643964},"labels":[],"label_agreement":null},{"id":"W4280501111","doi":"10.1038/s41379-022-01098-4","title":"Correction to: Machine learning for rhabdomyosarcoma histopathology","year":2022,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Hematological disorders and diagnostics","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Histopathology; Rhabdomyosarcoma; Sarcoma; Compendium; Citation; Medicine; Pathology; Artificial intelligence; Computer science; Library science; Geography","score_opus":0.022551039428581474,"score_gpt":0.286454802275446,"score_spread":0.2639037628468645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280501111","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016700539,0.00089119334,0.00085138355,0.0643842,0.929324,0.000028391902,0.000959825,0.0005089582,0.0028850965],"genre_scores_gemma":[0.012528863,0.005539511,0.007038515,0.115500726,0.6307823,0.00022406377,0.0021756112,0.0020593866,0.22415107],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973779,0.0004124163,0.0005871907,0.00038864493,0.000991789,0.00024202198],"domain_scores_gemma":[0.9740416,0.00747725,0.0011773589,0.0016289249,0.014068791,0.0016060506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025850479,0.0016531305,0.0016545329,0.0035190333,0.0021724363,0.0031352798,0.002444812,0.0061102062,0.06803827],"category_scores_gemma":[0.054211013,0.0008657339,0.0013468638,0.0013502783,0.002059895,0.0017092233,0.0014458424,0.009327044,0.039577007],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002017409,0.0000039419674,0.0000654344,0.00006939398,0.000006472967,0.00030950396,0.000007829863,0.00003246967,0.000030382964,0.0003051644,0.9940706,0.005078653],"study_design_scores_gemma":[0.000046851565,0.000021604288,0.00073577237,0.00029072896,0.000031496285,0.0018007876,0.000047614976,0.00048443812,0.00035344128,0.002356084,0.9937955,0.00003556521],"about_ca_topic_score_codex":0.009059159,"about_ca_topic_score_gemma":0.011070652,"teacher_disagreement_score":0.06803827,"about_ca_system_score_codex":0.0026080566,"about_ca_system_score_gemma":0.0034131652,"threshold_uncertainty_score":0.2276107},"labels":[],"label_agreement":null},{"id":"W4280537348","doi":"10.1038/s41379-022-01094-8","title":"Association of HPV42 with digital papillary adenocarcinoma and the use of in situ hybridization for its distinction from acral hidradenoma and diagnosis at non-acral sites","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Cancer Institute","keywords":"Pathology; In situ hybridization; Sweat gland; Medicine; Adenocarcinoma; Papillary adenocarcinoma; Papillary tumor; Biology; SWEAT; Cancer; Internal medicine","score_opus":0.0239465480766203,"score_gpt":0.23282712046783222,"score_spread":0.2088805723912119,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280537348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956091,0.0008231622,0.0006451795,0.00009346861,0.000018075827,0.0000101479,0.000057998688,0.000017185961,0.0027257542],"genre_scores_gemma":[0.9994118,0.00014326086,0.00020258043,0.000014644064,0.000018001068,0.0000027179547,0.0000318445,0.0000022538652,0.00017291619],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992884,0.00019482498,0.000067171684,0.000115856245,0.00016917908,0.00016467905],"domain_scores_gemma":[0.99815756,0.0007895483,0.00034937166,0.00029179547,0.00019291579,0.00021881747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008881315,0.0004226247,0.00022960782,0.001836443,0.00047611044,0.0006720037,0.00040191947,0.00083597365,0.0024395473],"category_scores_gemma":[0.003814367,0.0003904719,0.00034519396,0.0010427109,0.00075693184,0.00079178874,0.00042398355,0.0006917867,0.0003704846],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005633411,0.00006351922,0.9739759,0.00002438411,0.000034132816,0.012174,0.00016014007,0.00011681713,0.009397529,0.00018195531,0.00005387131,0.0032544334],"study_design_scores_gemma":[0.00001390918,0.0004915201,0.8695246,0.00001635211,0.00009260807,0.11938154,0.0011392292,0.0016712296,0.005959561,0.0004759907,0.0012136743,0.00001967078],"about_ca_topic_score_codex":0.0014461075,"about_ca_topic_score_gemma":0.0013462213,"teacher_disagreement_score":0.0024395473,"about_ca_system_score_codex":0.00019576613,"about_ca_system_score_gemma":0.00032397872,"threshold_uncertainty_score":0.008161128},"labels":[],"label_agreement":null},{"id":"W4281688939","doi":"10.1038/s41379-022-01111-w","title":"Impact of cribriform pattern 4 and intraductal prostatic carcinoma on National Comprehensive Cancer Network (NCCN) and Cancer of Prostate Risk Assessment (CAPRA) patient stratification","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University Health Network; Princess Margaret Cancer Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"Prostate Cancer Canada","keywords":"Medicine; Prostate cancer; Nomogram; Capra; Biochemical recurrence; Oncology; Cancer; Prostatectomy; Cribriform; Concordance; Internal medicine; Lymphovascular invasion; Cohort; breakpoint cluster region; Urology; Carcinoma; Biology","score_opus":0.024496711590417334,"score_gpt":0.3256279791356707,"score_spread":0.3011312675452534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281688939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898273,0.0021158613,0.0003813146,0.0010481857,0.000102410326,0.000023523486,0.00091037474,0.000018885525,0.0055721123],"genre_scores_gemma":[0.99842453,0.00022173818,0.00019345991,0.00014318567,0.000056870715,0.0000043328564,0.0005514899,0.000007294767,0.00039708157],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881184,0.00036407902,0.00011075212,0.00019876286,0.00027914412,0.00023545533],"domain_scores_gemma":[0.99733055,0.00068884867,0.000927744,0.00018415683,0.00034056674,0.000528075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010733937,0.00033409317,0.00047525822,0.0008808206,0.000552952,0.0011245887,0.000671825,0.0007085807,0.0032966202],"category_scores_gemma":[0.0059118224,0.00018105104,0.001053765,0.0009779927,0.00039780082,0.0009349011,0.000890749,0.001027586,0.0003710772],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017309381,0.000013747665,0.9954933,0.000008951162,0.00009774952,0.00007816301,0.00001746914,0.000109628905,0.00009437731,0.00004920487,0.0002358939,0.00362832],"study_design_scores_gemma":[0.000007898443,0.000110880086,0.9965406,0.000022525173,0.0001577292,0.00067476253,0.0002011125,0.0011047026,0.000098187855,0.0002755864,0.0007943764,0.0000115355515],"about_ca_topic_score_codex":0.0072906027,"about_ca_topic_score_gemma":0.018992707,"teacher_disagreement_score":0.0072906027,"about_ca_system_score_codex":0.0006660977,"about_ca_system_score_gemma":0.0011171716,"threshold_uncertainty_score":0.014496326},"labels":[],"label_agreement":null},{"id":"W4282927539","doi":"10.1038/s41379-022-01117-4","title":"Nuclear expression of AFF2 C-terminus is a sensitive and specific ancillary marker for DEK::AFF2 carcinoma of the sinonasal tract","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Head and Neck Surgical Oncology","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"Taipei Veterans General Hospital; Ministry of Science and Technology, Taiwan","keywords":"Immunohistochemistry; Pathology; Fluorescence in situ hybridization; Fusion transcript; In situ hybridization; Biology; Carcinoma; Reverse transcription polymerase chain reaction; Gene expression; Fusion gene; Gene; Medicine","score_opus":0.023161150618873097,"score_gpt":0.2592697428912821,"score_spread":0.236108592272409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282927539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9673953,0.0028731774,0.014703633,0.00030241034,0.00009748281,0.000052498937,0.000984014,0.0002389941,0.013352504],"genre_scores_gemma":[0.9814078,0.00080443383,0.009586564,0.00006222217,0.00002886709,0.000043276283,0.0014408572,0.000054159726,0.0065717464],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997489,0.000033743625,0.000021194259,0.00007187322,0.000052937237,0.00007141503],"domain_scores_gemma":[0.99982506,0.00003226223,0.00003648618,0.00003573488,0.000028757851,0.000041762134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002868639,0.00048504095,0.00021972953,0.00054167205,0.00058773,0.0005729257,0.0003049864,0.00044785344,0.0037442143],"category_scores_gemma":[0.00022484944,0.00019799154,0.00026874276,0.00043145343,0.0006381907,0.00062843587,0.00051057077,0.0006406295,0.0011761334],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000876155,0.000014871548,0.0009646492,0.00005093095,0.000007565071,0.00029484462,0.000035745998,0.00004897953,0.99673295,0.0004953853,0.00013908108,0.0011273687],"study_design_scores_gemma":[0.000022315318,0.00020447704,0.011705339,0.000012209188,0.00003507794,0.004199964,0.0001864512,0.0016231405,0.96627474,0.00025517883,0.0154653555,0.000015637952],"about_ca_topic_score_codex":0.0012736408,"about_ca_topic_score_gemma":0.0022627616,"teacher_disagreement_score":0.0037442143,"about_ca_system_score_codex":0.00047329138,"about_ca_system_score_gemma":0.0003080131,"threshold_uncertainty_score":0.012525618},"labels":[],"label_agreement":null},{"id":"W4282941073","doi":"10.1038/s41379-022-01115-6","title":"Xanthogranulomatous epithelial tumors and keratin-positive giant cell-rich soft tissue tumors: two aspects of a single entity with frequent HMGA2-NCOR2 fusions","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Soft tissue tumor case studies","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Pathology; Biology; Giant cell; Keratin; Immunohistochemistry; Giant Cell Tumors; Soft tissue; Medicine","score_opus":0.011391615675614076,"score_gpt":0.24767559908016673,"score_spread":0.23628398340455264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282941073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9821063,0.0018155628,0.0033232968,0.0010333392,0.000114023474,0.00018689784,0.00032459473,0.0001420078,0.010953955],"genre_scores_gemma":[0.9960641,0.00041099417,0.0018755108,0.00018357584,0.00043934866,0.00004295644,0.00011501081,0.000027298163,0.00084112736],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99890125,0.000120444056,0.00016065234,0.00032476755,0.00017389886,0.00031903313],"domain_scores_gemma":[0.9966898,0.0012225453,0.00077132543,0.00048349163,0.00013740851,0.00069542765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008411719,0.00230587,0.0010690851,0.0036465551,0.0017394047,0.0024249917,0.0014860831,0.0045879255,0.0043587014],"category_scores_gemma":[0.0048196893,0.0014989967,0.00107507,0.0021440643,0.003163879,0.0031706898,0.0027178365,0.0022223643,0.0015691201],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011234508,0.000041052037,0.01118176,0.000037120826,0.000012776274,0.98415923,0.0002332927,0.00009294507,0.002572316,0.00059521385,0.00009885368,0.00086321146],"study_design_scores_gemma":[0.000020259587,0.000035110246,0.006924476,0.000009233927,0.000022335547,0.99070567,0.00016494437,0.00028034256,0.0010925466,0.00042982298,0.00030520762,0.000010047757],"about_ca_topic_score_codex":0.0006660739,"about_ca_topic_score_gemma":0.00063003687,"teacher_disagreement_score":0.0045879255,"about_ca_system_score_codex":0.0008287036,"about_ca_system_score_gemma":0.00049350574,"threshold_uncertainty_score":0.014581323},"labels":[],"label_agreement":null},{"id":"W4283259569","doi":"10.1038/s41379-022-01104-9","title":"Systematically higher Ki67 scores on core biopsy samples compared to corresponding resection specimen in breast cancer: a multi-operator and multi-institutional study","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre; University of Alberta; Ontario Institute for Cancer Research; McMaster University; Juravinski Hospital; University of British Columbia","funders":"National Center for Advancing Translational Sciences","keywords":"Biopsy; Medicine; Breast cancer; Core biopsy; Immunohistochemistry; Pathology; Radiology; Cancer; Internal medicine","score_opus":0.04746922533072951,"score_gpt":0.30703186460974285,"score_spread":0.25956263927901335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283259569","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983734,0.00030523192,0.0009126962,0.000011648451,0.0000089388805,0.00003650158,0.00008243836,0.000012893315,0.00025626938],"genre_scores_gemma":[0.99923754,0.000053801275,0.00044373565,0.000023553446,0.000016107828,0.00002194196,0.00012170422,0.000015047202,0.0000666047],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9936221,0.0023897353,0.00054451183,0.0017679398,0.0012841028,0.00039156593],"domain_scores_gemma":[0.9862743,0.0042886846,0.0038409838,0.0030002638,0.0018336074,0.0007622778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0047129663,0.0003746029,0.0005759046,0.0013576787,0.0007071593,0.00085713016,0.00059210527,0.0005440219,0.0013302421],"category_scores_gemma":[0.010085906,0.0004813445,0.0004247878,0.0010480643,0.00090381486,0.00055833545,0.0012760917,0.00036338717,0.000474936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068559946,0.00011639889,0.9882803,0.000048896174,0.00018050973,0.00034156325,0.00049532996,0.00007457681,0.005419519,0.000028051196,0.00010017306,0.004229138],"study_design_scores_gemma":[0.000018166113,0.00064348284,0.9937976,0.000010041104,0.00012923274,0.0018808867,0.00051158154,0.00026537606,0.002149205,0.00006195541,0.0005143662,0.00001804977],"about_ca_topic_score_codex":0.000950035,"about_ca_topic_score_gemma":0.0013612153,"teacher_disagreement_score":0.0047129663,"about_ca_system_score_codex":0.00037987457,"about_ca_system_score_gemma":0.00033547948,"threshold_uncertainty_score":0.024924874},"labels":[],"label_agreement":null},{"id":"W4283520680","doi":"10.1038/s41379-022-01102-x","title":"p53 immunohistochemistry in endometrial cancer: clinical and molecular correlates in the PORTEC-3 trial","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":161,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Leids Universitair Medisch Centrum; Academy of Medical Sciences; KWF Kankerbestrijding; National Institute for Health and Care Research; Universiteit Leiden; Cancer Research UK","keywords":"Immunohistochemistry; Pathology; Cancer; Medicine; Endometrial cancer; P53 protein; Staining; Biology; Internal medicine","score_opus":0.03437004570348291,"score_gpt":0.35632836836483517,"score_spread":0.32195832266135227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283520680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99190557,0.004141035,0.0002221486,0.00039885176,0.00006108062,0.0001833561,0.00066270045,0.000014745986,0.0024104936],"genre_scores_gemma":[0.99453074,0.0014822221,0.00041796514,0.0003411529,0.00011119142,0.0002981724,0.0021004346,0.000013042366,0.0007050452],"study_design_codex":"randomized_trial","study_design_gemma":"observational","domain_scores_codex":[0.9986877,0.00089598936,0.00009132399,0.00008829252,0.00016083289,0.00007582876],"domain_scores_gemma":[0.99817955,0.00074110157,0.00038796666,0.00025558166,0.00011750003,0.00031847018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003954853,0.0003235978,0.0006766152,0.0002744115,0.00016528358,0.0008014354,0.00031971314,0.0005914191,0.001358863],"category_scores_gemma":[0.0043135616,0.00018528085,0.000848844,0.0005930541,0.00041382803,0.0007022631,0.00036543095,0.0010549482,0.00018984264],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.5759147,0.0022516155,0.2921817,0.0010704509,0.0028902683,0.0010228404,0.0002004817,0.0025446517,0.0086879525,0.00046534155,0.004001574,0.10876844],"study_design_scores_gemma":[0.10094671,0.09130775,0.77356404,0.0003430851,0.0052872496,0.0026234474,0.00023178839,0.0060510696,0.0047861943,0.0017237687,0.013042698,0.000092204755],"about_ca_topic_score_codex":0.0002800283,"about_ca_topic_score_gemma":0.0007953502,"teacher_disagreement_score":0.003954853,"about_ca_system_score_codex":0.00027534107,"about_ca_system_score_gemma":0.0004389269,"threshold_uncertainty_score":0.020915508},"labels":[],"label_agreement":null},{"id":"W4285586757","doi":"10.1038/s41379-022-01134-3","title":"Molecular assessment of paratesticular rhabdomyomas demonstrates recurrent findings, including a novel H3C2 p.K37I mutation","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Tumors and Oncological Cases","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Rhabdomyoma; Biology; Somatic cell; Epigenetics; Mutation; Chromosome; Germline mutation; Pathology; Genetics; Medicine; Gene; Tuberous sclerosis","score_opus":0.05114795913722615,"score_gpt":0.34985507063522164,"score_spread":0.2987071114979955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285586757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98274785,0.0017277787,0.0033632508,0.000967597,0.00006879646,0.000056220437,0.0005244988,0.0002522532,0.010291905],"genre_scores_gemma":[0.99769944,0.00028959938,0.0010794643,0.00007238694,0.000026155256,0.000005838047,0.00012526514,0.000016256485,0.00068566744],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9998141,0.000011364474,0.000016911617,0.00004575395,0.00005549883,0.000056381625],"domain_scores_gemma":[0.9996716,0.000086425454,0.00004947024,0.000032653705,0.000047137622,0.00011266136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016162053,0.00060980197,0.00024904343,0.0012111282,0.00028017597,0.00035337408,0.0005234505,0.0009900498,0.0029440497],"category_scores_gemma":[0.0006002817,0.00019992347,0.0003036136,0.00061999314,0.0006767423,0.00040840212,0.0003753246,0.0004300081,0.00078291853],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000355314,0.00005194265,0.064363316,0.00021433795,0.000097099415,0.55637187,0.000388281,0.0014568547,0.34744775,0.0009912963,0.0017674436,0.026494473],"study_design_scores_gemma":[0.000049893148,0.0002830895,0.12218291,0.000051978473,0.00017432382,0.72794473,0.0005220613,0.0066297906,0.1349784,0.0013316937,0.005802039,0.000049037066],"about_ca_topic_score_codex":0.0025061152,"about_ca_topic_score_gemma":0.0029029537,"teacher_disagreement_score":0.0029440497,"about_ca_system_score_codex":0.00042318928,"about_ca_system_score_gemma":0.00030588184,"threshold_uncertainty_score":0.009848833},"labels":[],"label_agreement":null},{"id":"W4285703498","doi":"10.1038/s41379-020-0466-7","title":"Abstracts from USCAP 2020: Cytopathology (317-458)","year":2020,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Cytopathology; Hematopathology; Pathology; Medicine; Biology; Cytology","score_opus":0.05215688952390102,"score_gpt":0.3226220367995706,"score_spread":0.27046514727566956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285703498","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014401228,0.011831547,0.0023113252,0.024448043,0.039008453,0.0015451995,0.102804504,0.007267344,0.80934346],"genre_scores_gemma":[0.003424101,0.0060970946,0.0016944306,0.010161927,0.016288059,0.00052546914,0.05723382,0.001200761,0.9033742],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982114,0.00025204732,0.00017100025,0.000162635,0.0009901271,0.00021272863],"domain_scores_gemma":[0.9856146,0.0014312263,0.000722295,0.0006265021,0.008090146,0.0035152282],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0027779988,0.0017954055,0.0011979373,0.0064195567,0.001259981,0.005413823,0.001913903,0.0041471887,0.81358504],"category_scores_gemma":[0.0076676086,0.0008788133,0.0012922253,0.0026385502,0.00050377863,0.0014925579,0.0027993785,0.002035124,0.7070986],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042586533,0.000032035947,0.00007804803,0.00014114489,0.0000025358124,0.000018928215,0.0000017331505,0.000019638954,0.00021067784,0.000070854905,0.979931,0.019450787],"study_design_scores_gemma":[0.00006639513,0.000053311534,0.0014357066,0.0003120039,0.000009056813,0.000080285805,0.000013396737,0.00010433593,0.000315136,0.00045019703,0.99714655,0.0000136345425],"about_ca_topic_score_codex":0.0051376363,"about_ca_topic_score_gemma":0.009591728,"teacher_disagreement_score":0.18641496,"about_ca_system_score_codex":0.0017537661,"about_ca_system_score_gemma":0.003987509,"threshold_uncertainty_score":0.26589823},"labels":[],"label_agreement":null},{"id":"W4286716089","doi":"10.1038/s41379-022-01100-z","title":"Mucoepidermoid carcinoma (MEC) and adenosquamous carcinoma (ASC), the same or different entities?","year":2022,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Cancer Institute; World Health Organization; U.S. Department of Health and Human Services","keywords":"Adenosquamous carcinoma; Mucoepidermoid carcinoma; KRAS; Carcinoma; Medicine; Internal medicine; Pathology; Sebaceous carcinoma; Oncology; Adenocarcinoma; Cancer; Colorectal cancer","score_opus":0.09004559836442495,"score_gpt":0.3236477694871192,"score_spread":0.23360217112269427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286716089","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003830023,0.993012,0.00011436692,0.002031708,0.0004861792,0.000061421226,0.00008411202,0.0000026474831,0.0003774976],"genre_scores_gemma":[0.08287975,0.9039566,0.0018881665,0.007991966,0.002360815,0.00033266802,0.000281802,0.00000692799,0.0003012579],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.98445964,0.004571055,0.007233536,0.0014722169,0.0019251559,0.0003384401],"domain_scores_gemma":[0.95377517,0.02489012,0.015674155,0.0008955944,0.004133546,0.00063139864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009609639,0.00061846344,0.005569159,0.0103302775,0.00055196625,0.0029677646,0.0013300381,0.004416738,0.0018351043],"category_scores_gemma":[0.05604931,0.00084782747,0.0021413807,0.011943786,0.0023629912,0.007325077,0.001288421,0.00097210525,0.00041153922],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012344628,0.00008867973,0.027819436,0.6520794,0.007825037,0.0023441745,0.0016621021,0.00011401035,0.0015269945,0.004075904,0.0069876956,0.294242],"study_design_scores_gemma":[0.0015939163,0.0012443224,0.08049595,0.7152,0.030681392,0.030905306,0.007849422,0.00035383462,0.00092347385,0.008174583,0.122287914,0.00028985465],"about_ca_topic_score_codex":0.004866094,"about_ca_topic_score_gemma":0.010273217,"teacher_disagreement_score":0.0103302775,"about_ca_system_score_codex":0.0021450734,"about_ca_system_score_gemma":0.006171328,"threshold_uncertainty_score":0.050821245},"labels":[],"label_agreement":null},{"id":"W4288510758","doi":"10.1038/s41379-019-0236-6","title":"Abstracts from USCAP 2019: Gastrointestinal Pathology (578-775)","year":2019,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Diagnosis and treatment of tuberculosis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pathology; Gastrointestinal pathology; Medicine; Hematopathology; Anatomical pathology; Biology; Immunohistochemistry","score_opus":0.013306475862552642,"score_gpt":0.2541328085958771,"score_spread":0.24082633273332446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288510758","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019913088,0.028486362,0.00137885,0.035136603,0.13025059,0.00093303,0.035455544,0.0019646243,0.7644031],"genre_scores_gemma":[0.0041035567,0.012820449,0.00060927996,0.008890871,0.060771286,0.00022901183,0.017297244,0.0003940487,0.8948841],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99910575,0.00013187162,0.00011666554,0.00009700966,0.00042415908,0.00012450099],"domain_scores_gemma":[0.99268395,0.00073830556,0.0005344737,0.00022079801,0.00366825,0.002154234],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011058026,0.0014140649,0.001166108,0.0045104995,0.0009155335,0.0032267128,0.0011300789,0.0032679585,0.64959383],"category_scores_gemma":[0.004052382,0.00050973386,0.0010479535,0.002017121,0.0004338763,0.0012291594,0.0019083122,0.0021107502,0.4833768],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006904008,0.000033619574,0.00012673961,0.00021561542,0.0000051844836,0.000080518286,0.0000023693688,0.000026883528,0.00022549437,0.000087747874,0.97554433,0.023582518],"study_design_scores_gemma":[0.00006675507,0.00007524259,0.0026991558,0.00062808715,0.000016489148,0.00025741933,0.000016783672,0.00009740207,0.00025173335,0.00031913404,0.99555796,0.0000138628675],"about_ca_topic_score_codex":0.0032271086,"about_ca_topic_score_gemma":0.007367803,"teacher_disagreement_score":0.64959383,"about_ca_system_score_codex":0.0013718499,"about_ca_system_score_gemma":0.0020679543,"threshold_uncertainty_score":0.49981183},"labels":[],"label_agreement":null},{"id":"W4292670190","doi":"10.1038/modpathol.2016.2","title":"Bone and Soft Tissue Pathology","year":2016,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Medical Imaging and Pathology Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Pathology; Soft tissue pathology; Bone pathology; Soft tissue; Medicine","score_opus":0.02492119853926301,"score_gpt":0.29726207783055975,"score_spread":0.27234087929129674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292670190","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.037061483,0.26440844,0.038368195,0.020439306,0.008354583,0.00027940026,0.0007193287,0.0009500564,0.6294192],"genre_scores_gemma":[0.36134142,0.15013805,0.046052057,0.011396731,0.02625763,0.00016675155,0.0010878794,0.00042986908,0.40312958],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99895155,0.00017482988,0.00012603024,0.0001788269,0.00045007654,0.00011871465],"domain_scores_gemma":[0.9981042,0.00036624505,0.00021995795,0.00037255668,0.00060209393,0.0003348688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012549991,0.00066468515,0.0004656527,0.0053722803,0.0010711296,0.0035103308,0.0008885425,0.0016265863,0.036583826],"category_scores_gemma":[0.0031096514,0.0004390311,0.0005889873,0.002390217,0.0042027067,0.0021128743,0.0023936967,0.0018147315,0.021376539],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019420339,0.00017143277,0.018925086,0.0012872346,0.00012858101,0.017955745,0.0006962454,0.00040993918,0.032221,0.13065065,0.09959644,0.6977635],"study_design_scores_gemma":[0.000012289801,0.00008430003,0.017340451,0.00046995826,0.000060897648,0.1104384,0.0004785165,0.00029085382,0.004453437,0.04959539,0.8167369,0.000038666323],"about_ca_topic_score_codex":0.000988457,"about_ca_topic_score_gemma":0.0022906784,"teacher_disagreement_score":0.036583826,"about_ca_system_score_codex":0.0009761308,"about_ca_system_score_gemma":0.0016876302,"threshold_uncertainty_score":0.122385025},"labels":[],"label_agreement":null},{"id":"W4293325534","doi":"10.1038/s41379-022-01136-1","title":"Molecular correlates of male germ cell tumors with overgrowth of components resembling somatic malignancies","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Testicular diseases and treatments","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Sinai Health System; University of Toronto","funders":"","keywords":"Biology; Isochromosome; Somatic cell; KRAS; Pathology; Sarcoma; Germ cell tumors; Primitive neuroectodermal tumor; Aneuploidy; Cancer research; Chromosome; Mutation; Genetics; Karyotype; Gene; Chemotherapy; Medicine","score_opus":0.012579514068844166,"score_gpt":0.2300690126545517,"score_spread":0.21748949858570754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293325534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961777,0.0018242159,0.000458524,0.00007097719,0.000012216874,0.000007373935,0.00017874563,0.00001944369,0.0012507979],"genre_scores_gemma":[0.9983463,0.0005913254,0.0002931869,0.000021612586,0.000018251834,0.000004003589,0.00021962138,0.0000037654304,0.00050196046],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998801,0.000023979866,0.000009953583,0.000021862503,0.000034470042,0.000029581826],"domain_scores_gemma":[0.9995901,0.000065059685,0.00019153956,0.000028536711,0.000037885704,0.000086973516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016451754,0.00014447873,0.000118908094,0.0010765468,0.00018732242,0.00044823185,0.00019431002,0.00019154047,0.0023510742],"category_scores_gemma":[0.0003445497,0.00010685851,0.00010895716,0.00058905804,0.0002958688,0.00020844955,0.00023358509,0.00025451166,0.00024974727],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014328907,0.0001105268,0.2967722,0.00013904611,0.0001579515,0.0021055762,0.00016876952,0.0002757592,0.68113154,0.0027666613,0.0003814189,0.014557611],"study_design_scores_gemma":[0.000014139559,0.00025957407,0.93303406,0.0000072788657,0.00007118783,0.004702974,0.00028993256,0.0003463307,0.05759396,0.00047025215,0.0032026647,0.000007560663],"about_ca_topic_score_codex":0.00022605882,"about_ca_topic_score_gemma":0.00022363056,"teacher_disagreement_score":0.0023510742,"about_ca_system_score_codex":0.00013073925,"about_ca_system_score_gemma":0.00016475347,"threshold_uncertainty_score":0.007865131},"labels":[],"label_agreement":null},{"id":"W4294612686","doi":"10.1038/s41379-022-01146-z","title":"Deep learning-based histotype diagnosis of ovarian carcinoma whole-slide pathology images","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":85,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; BC Cancer Agency; Vancouver General Hospital; University of British Columbia","funders":"CIHR Skin Research Training Centre; Canadian Institutes of Health Research; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Michael Smith Health Research BC; Government of Canada","keywords":"Pathology; Hematopathology; Medicine; Cytopathology; Anatomical pathology; Ovarian carcinoma; Ovarian cancer; Biology; Immunohistochemistry; Cancer; Internal medicine","score_opus":0.01287668340762892,"score_gpt":0.22502375351454887,"score_spread":0.21214707010691994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294612686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76240706,0.0016543649,0.22351137,0.00084987486,0.00012367252,0.00016667719,0.0023319519,0.0025605694,0.006394413],"genre_scores_gemma":[0.93504477,0.00052812666,0.058331035,0.00016090617,0.000042529573,0.000042983283,0.0017030847,0.00007368452,0.0040728156],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998435,0.000018086348,0.000011388558,0.000032921685,0.000052998672,0.000041025894],"domain_scores_gemma":[0.9997392,0.00006827934,0.000024491295,0.000029533521,0.00011380775,0.000024615092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003181627,0.00031124844,0.00021893253,0.0013573568,0.00015278829,0.0006492352,0.0004737755,0.0004963013,0.0019169636],"category_scores_gemma":[0.0009183397,0.00018530735,0.00030409507,0.00044718367,0.00012346944,0.00032094785,0.0004361015,0.00026255354,0.0007136375],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008240392,0.00017890394,0.078635305,0.00031884198,0.00015466008,0.001513376,0.00017622154,0.03714807,0.16007552,0.0017570729,0.008939762,0.7102783],"study_design_scores_gemma":[0.000029203067,0.00010674859,0.048364684,0.0000618012,0.00010779914,0.0021979252,0.00020149116,0.8648897,0.07605285,0.0021541228,0.005805913,0.000027748492],"about_ca_topic_score_codex":0.003855448,"about_ca_topic_score_gemma":0.00658813,"teacher_disagreement_score":0.003855448,"about_ca_system_score_codex":0.00029768643,"about_ca_system_score_gemma":0.0004687738,"threshold_uncertainty_score":0.007665992},"labels":[],"label_agreement":null},{"id":"W4295083694","doi":"10.1038/s41379-022-01151-2","title":"RB1-deficient squamous cell carcinoma: the proposed source of combined Merkel cell carcinoma","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Nova Scotia Health Authority; Dalhousie University","funders":"Nova Scotia Health Research Foundation","keywords":"Merkel cell polyomavirus; Merkel cell carcinoma; Biology; Pathology; Immunohistochemistry; Carcinoma; Cancer; Pathogenesis; Cancer research; Medicine; Genetics","score_opus":0.01197054696853739,"score_gpt":0.21959499564655552,"score_spread":0.20762444867801813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295083694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9495797,0.010302906,0.015824076,0.0014162748,0.00016402475,0.0001148138,0.00083929946,0.0008787449,0.020880021],"genre_scores_gemma":[0.9931753,0.0011601592,0.002022966,0.00008041635,0.00007270286,0.000012120565,0.000109866334,0.000034454595,0.003331994],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99965274,0.00004901183,0.000033865977,0.000091822636,0.00010376814,0.00006883996],"domain_scores_gemma":[0.9991186,0.00016300526,0.00015663078,0.00031677663,0.0001016464,0.00014336983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052042946,0.00055489707,0.00069854956,0.0021003366,0.0005228133,0.0011612313,0.0009255405,0.0009381442,0.0047121216],"category_scores_gemma":[0.0010634987,0.00031825856,0.0003410012,0.0006719198,0.00073912553,0.001092776,0.00085095764,0.0008156395,0.0013604881],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025911941,0.0001859057,0.05462154,0.00084503763,0.0001972352,0.110159725,0.00071701105,0.0007189803,0.75276786,0.0315695,0.0013304752,0.04429559],"study_design_scores_gemma":[0.00014862616,0.0006817782,0.06370437,0.00013109797,0.00041688562,0.39707354,0.00072991615,0.0076816035,0.48906988,0.009931857,0.030345922,0.0000846169],"about_ca_topic_score_codex":0.00027944637,"about_ca_topic_score_gemma":0.00022353101,"teacher_disagreement_score":0.0047121216,"about_ca_system_score_codex":0.00043809507,"about_ca_system_score_gemma":0.00036317453,"threshold_uncertainty_score":0.01576364},"labels":[],"label_agreement":null},{"id":"W4296139718","doi":"10.1038/s41379-022-01145-0","title":"Expression of phosphorylated ribosomal protein S6 in mesothelioma patients - correlation with clinico-pathological characteristics and outcome: results from the European Thoracic Oncology Platform (ETOP) Mesoscape project","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Toronto General Hospital","funders":"Universität Zürich; Oncosuisse; Bristol-Myers Squibb","keywords":"Medicine; Immunohistochemistry; Malignancy; Cohort; Internal medicine; Oncology; Stage (stratigraphy); Mesothelioma; Pathological; Pathology; Biology","score_opus":0.03195731822827584,"score_gpt":0.30110373008940766,"score_spread":0.2691464118611318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296139718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985703,0.00031432117,0.00008484256,0.000013111887,0.0000027446708,0.000009811868,0.0008280945,0.0000037093594,0.00017306049],"genre_scores_gemma":[0.9979741,0.00012765595,0.00008098457,0.000011231961,0.0000083846135,0.000013181895,0.0016684022,0.0000021826374,0.00011386181],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99969757,0.00005734743,0.000043854554,0.0000979752,0.000066278546,0.000037059068],"domain_scores_gemma":[0.9992441,0.00010621204,0.00026208782,0.00006918525,0.00014695822,0.00017150836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058276305,0.00022083934,0.00027451146,0.0008213108,0.00022296267,0.00047913304,0.0001822484,0.0002706964,0.0006175313],"category_scores_gemma":[0.0011278302,0.00014516755,0.00032336003,0.0007028945,0.00015852886,0.00026270928,0.00063197874,0.00019416538,0.00023681107],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054887566,0.00002648798,0.9947561,0.000021391743,0.00006687283,0.00008540939,0.00005252654,0.00010793217,0.0011701855,0.0000059462354,0.00014420156,0.0030141762],"study_design_scores_gemma":[0.000009550055,0.00010844996,0.99896705,0.0000033279211,0.00003313469,0.00027078856,0.000043043277,0.00012350662,0.0002192572,0.000008506171,0.0002110483,0.0000023611594],"about_ca_topic_score_codex":0.00095763785,"about_ca_topic_score_gemma":0.0010711959,"teacher_disagreement_score":0.00095763785,"about_ca_system_score_codex":0.00023359554,"about_ca_system_score_gemma":0.00013719233,"threshold_uncertainty_score":0.003082037},"labels":[],"label_agreement":null},{"id":"W4298139025","doi":"10.1038/s41379-022-01155-y","title":"Clinicopathologic and molecular spectrum of testicular sex cord-stromal tumors not amenable to specific histopathologic subclassification","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Testicular diseases and treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Rockyview General Hospital; University of Calgary","funders":"","keywords":"Pathology; Histology; CDKN2A; Immunohistochemistry; Biology; Stromal cell; Medicine; Anatomical pathology; Internal medicine; Cancer","score_opus":0.029738689515217045,"score_gpt":0.27528062817347665,"score_spread":0.2455419386582596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298139025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926535,0.0007393352,0.0012692603,0.000113096656,0.000016161375,0.000033736273,0.0001385133,0.000040687934,0.004995532],"genre_scores_gemma":[0.9989429,0.00015636072,0.00046346933,0.000022536835,0.000024997158,0.000008038477,0.00018463793,0.0000053953995,0.00019175757],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996667,0.00006228073,0.000047075486,0.00006126857,0.00007166738,0.00009102605],"domain_scores_gemma":[0.99912244,0.00021653381,0.00023799168,0.00013244996,0.00012557283,0.00016504977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064726255,0.00040404426,0.0003340489,0.0018085988,0.00061921304,0.00061799143,0.00037689108,0.00034661609,0.0017416982],"category_scores_gemma":[0.0015577414,0.00014899184,0.00025758907,0.00088898157,0.0008189549,0.00043004807,0.00052342686,0.00029285613,0.000344796],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008499663,0.000082152976,0.8916177,0.00008173293,0.000057300193,0.042208117,0.00039846083,0.000627714,0.043108042,0.0016003806,0.00044680346,0.018921567],"study_design_scores_gemma":[0.000053748237,0.00034871566,0.7673675,0.0000402611,0.00016264466,0.2141414,0.0013247165,0.0023818077,0.008743174,0.0024040097,0.0030087042,0.00002341307],"about_ca_topic_score_codex":0.00069720234,"about_ca_topic_score_gemma":0.0010234909,"teacher_disagreement_score":0.0018085988,"about_ca_system_score_codex":0.00025150887,"about_ca_system_score_gemma":0.0004727172,"threshold_uncertainty_score":0.0058265924},"labels":[],"label_agreement":null},{"id":"W4306158070","doi":"10.1038/s41379-022-01165-w","title":"Variability in endometrial carcinoma pathology practice: opportunities for improvement with molecular classification","year":2022,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Saskatoon City Hospital; Health Sciences Centre; Western University; University of Toronto; McGill University; Université de Montréal; University of Saskatchewan; Ovarian Cancer Canada; Université Laval; Centre Hospitalier de l’Université de Montréal; Hôtel-Dieu de Québec; University of Manitoba; Centre hospitalier universitaire de Québec; University of Calgary; Vancouver General Hospital; Juravinski Hospital; McMaster University; Dalhousie University; Sunnybrook Health Science Centre; Jewish General Hospital; Centre for Advancing Health Outcomes; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Medicine; Serous fluid; Immunohistochemistry; Serous carcinoma; Molecular pathology; Cohort; Endometrial cancer; Internal medicine; Oncology; Retrospective cohort study; Serous membrane; Pathology; Stage (stratigraphy); Carcinoma; Surgical pathology; Cancer; Anatomical pathology; Biology; Ovarian cancer; Gene","score_opus":0.07398285235646783,"score_gpt":0.3190476964050162,"score_spread":0.24506484404854834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306158070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74179655,0.043417804,0.076367095,0.10979106,0.0030371244,0.0005542962,0.00473958,0.0008494958,0.019446993],"genre_scores_gemma":[0.9629257,0.0055577476,0.02223902,0.0045708995,0.0011792711,0.00022375176,0.002446208,0.00018889736,0.0006686571],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.947752,0.025245337,0.008613863,0.008205555,0.008787007,0.001396262],"domain_scores_gemma":[0.78594,0.13022606,0.027745126,0.018816642,0.032345135,0.0049270275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0647186,0.0002909087,0.0010992634,0.0029428771,0.0012014782,0.0043524024,0.0028030707,0.0010684894,0.0033698766],"category_scores_gemma":[0.16016793,0.0003565484,0.00069594075,0.004301697,0.0012891042,0.0043336865,0.0038391012,0.0017137253,0.0005668325],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003229067,0.00020009067,0.72524744,0.00088742416,0.00024912422,0.00015028878,0.004903809,0.0014219384,0.0008104681,0.004217086,0.010741603,0.25084782],"study_design_scores_gemma":[0.000056910278,0.00034705034,0.9187908,0.0017924461,0.00014327696,0.001166679,0.012138711,0.009813288,0.0010393285,0.017858298,0.036632568,0.00022068783],"about_ca_topic_score_codex":0.008033047,"about_ca_topic_score_gemma":0.011452288,"teacher_disagreement_score":0.0647186,"about_ca_system_score_codex":0.0030391929,"about_ca_system_score_gemma":0.006404434,"threshold_uncertainty_score":0.34226876},"labels":[],"label_agreement":null},{"id":"W4306403492","doi":"10.1038/s41379-022-01170-z","title":"Correction to: Expression of phosphorylated ribosomal protein S6 in mesothelioma patients - correlation with clinico-pathological characteristics and outcome: results from the European Thoracic Oncology Platform (ETOP) Mesoscape project","year":2022,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"","keywords":"Pathology; Pathological; Protein expression; Mesothelioma; Medicine; Immunohistochemistry; Medical physics; Oncology; Biology; Biochemistry","score_opus":0.028138338482703956,"score_gpt":0.30677588789295807,"score_spread":0.2786375494102541,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306403492","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038589095,0.0009898923,0.00036171515,0.023559174,0.9714196,0.00002620466,0.0021893226,0.0001820116,0.00088628806],"genre_scores_gemma":[0.032925833,0.010491569,0.006126008,0.07698864,0.6871156,0.00047929728,0.012709547,0.0024955214,0.170668],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972639,0.00046794128,0.00067698397,0.00046132755,0.00084636395,0.00028343694],"domain_scores_gemma":[0.97992975,0.004900499,0.0012443612,0.0011311165,0.011456106,0.0013382604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003232913,0.0020813579,0.0022299911,0.003685674,0.0014523013,0.003331062,0.0029128345,0.0035532974,0.03818437],"category_scores_gemma":[0.03878033,0.000874224,0.0018764087,0.0021242516,0.0012757934,0.0012708107,0.0013019943,0.005984972,0.02165499],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001614891,0.000014002726,0.00039201084,0.00041207788,0.000056989713,0.000495923,0.00002567961,0.000062915315,0.000091908034,0.00022155869,0.99169344,0.0063719633],"study_design_scores_gemma":[0.00030813643,0.00008866071,0.0070221163,0.0013045848,0.00029763472,0.0025900304,0.00017533056,0.00062492606,0.0009809206,0.0012598706,0.9852447,0.00010311733],"about_ca_topic_score_codex":0.01138866,"about_ca_topic_score_gemma":0.009682522,"teacher_disagreement_score":0.03818437,"about_ca_system_score_codex":0.002327614,"about_ca_system_score_gemma":0.0033490036,"threshold_uncertainty_score":0.12773943},"labels":[],"label_agreement":null},{"id":"W4308253909","doi":"10.1038/s41379-022-01159-8","title":"A tribute to Prof. Ondrej Hes, MD, PhD (1968–2022)","year":2022,"lang":"en","type":"editorial","venue":"Modern Pathology","topic":"Urinary and Genital Oncology Studies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of British Columbia","funders":"","keywords":"Greatness; Tribute; Medicine; Honor; Privilege (computing); Renal pathology; General surgery; Classics; Pathology; Art history; Art; Literature; Kidney; Internal medicine; Law","score_opus":0.024892685506245335,"score_gpt":0.310105718959231,"score_spread":0.28521303345298565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308253909","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000017514629,0.0040949564,0.00007911506,0.06497078,0.92885166,0.000014212931,0.00003306951,0.000048639544,0.0018900483],"genre_scores_gemma":[0.0003041766,0.0036326915,0.00010585823,0.06870428,0.91090834,0.000033802135,0.00003989091,0.00006338693,0.016207574],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949393,0.0010845056,0.00059688406,0.0005748338,0.0025192134,0.00028527636],"domain_scores_gemma":[0.9692625,0.011754389,0.0018810106,0.00070290617,0.0113182925,0.0050809933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006470702,0.0028177048,0.003066061,0.003292707,0.00298788,0.0076268744,0.0027229204,0.01206817,0.023147509],"category_scores_gemma":[0.042707343,0.0012153971,0.002210503,0.0012391903,0.0020686188,0.0052419067,0.0018291395,0.021658646,0.030925987],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012962543,0.0000037193,0.00001152265,0.000052585638,0.000004949402,0.00005015489,0.000005998488,0.000007395159,0.000012729136,0.00009629541,0.9972867,0.00245504],"study_design_scores_gemma":[0.00003381705,0.000018123212,0.00012338247,0.0002965247,0.000018457216,0.00028963888,0.000032129105,0.000057300418,0.000041255844,0.00060560624,0.9984675,0.00001620738],"about_ca_topic_score_codex":0.0018096011,"about_ca_topic_score_gemma":0.0051918034,"teacher_disagreement_score":0.023147509,"about_ca_system_score_codex":0.002302622,"about_ca_system_score_gemma":0.0032641976,"threshold_uncertainty_score":0.07743609},"labels":[],"label_agreement":null},{"id":"W4313893282","doi":"10.1016/j.modpat.2022.100010","title":"p53-Abnormal “Fields of Dysplasia” in Human Papillomavirus–Independent Vulvar Squamous Cell Carcinoma Impacts Margins and Recurrence Risk","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Association of Nurses in Oncology; University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Carcinoma in situ; Pathology; Immunohistochemistry; Vulvar intraepithelial neoplasia; Dysplasia; Vulvar Carcinoma; Intraepithelial neoplasia; Lichen sclerosus; Staining; Biology; Carcinoma; Medicine; Vulva; Cancer; Internal medicine","score_opus":0.028277870078186034,"score_gpt":0.31529316134786356,"score_spread":0.2870152912696775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313893282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99794763,0.0006164339,0.00023556007,0.00006412417,0.00001760333,0.0000043644413,0.000054974254,0.000014029996,0.0010453648],"genre_scores_gemma":[0.9996183,0.000087606815,0.00004576589,0.00001126742,0.000007785534,0.0000012498372,0.00003231295,0.000003513649,0.00019218079],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99971837,0.0000593425,0.000018048835,0.00005839006,0.00007073679,0.000075040276],"domain_scores_gemma":[0.99915063,0.00019871842,0.0003373096,0.00007067215,0.00011929777,0.00012335426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040001003,0.00021458206,0.00022118154,0.0006717911,0.00036391898,0.0010024671,0.00027606575,0.00044348932,0.0027328413],"category_scores_gemma":[0.0023824128,0.00020774499,0.0003353551,0.00039867568,0.00039502783,0.0005450093,0.00049455394,0.00045941584,0.0002891063],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011762172,0.00012898368,0.9580969,0.00004723216,0.00009942839,0.0005426885,0.00018742439,0.00030964336,0.018612407,0.00024766364,0.00030442097,0.02024701],"study_design_scores_gemma":[0.0000055044234,0.00018659969,0.9945648,0.00001487028,0.00007916575,0.00079365284,0.00029190036,0.0005945619,0.0024811127,0.00038682373,0.0005941227,0.0000068700915],"about_ca_topic_score_codex":0.0015967822,"about_ca_topic_score_gemma":0.0016070602,"teacher_disagreement_score":0.0027328413,"about_ca_system_score_codex":0.0002809241,"about_ca_system_score_gemma":0.00024399307,"threshold_uncertainty_score":0.00914228},"labels":[],"label_agreement":null},{"id":"W4313897364","doi":"10.1016/j.modpat.2022.100068","title":"A Lower Frequency of Spliceosome Mutations Distinguishes Clonal Cytopenias of Undetermined Significance From Low-Risk Myelodysplastic Syndromes, Despite Inherent Similarities in Genomic, Laboratory, and Clinical Features","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Queen's University","funders":"","keywords":"Myelodysplastic syndromes; Clinical significance; Dysplasia; Myeloproliferative neoplasm; Medicine; Myeloid; Somatic evolution in cancer; Internal medicine; Oncology; Bone marrow; Cancer; Myelofibrosis","score_opus":0.03088262239070731,"score_gpt":0.32212099484817913,"score_spread":0.2912383724574718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313897364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99696416,0.00041260573,0.0007411454,0.00004523629,0.0000089181785,0.000006737691,0.0001787885,0.000025342637,0.0016171979],"genre_scores_gemma":[0.99916613,0.000077973724,0.00035118405,0.000022475648,0.000015362855,0.000002649803,0.0001948006,0.0000068947047,0.0001625656],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996711,0.00005645066,0.000060064027,0.00008084564,0.000092952,0.000038608876],"domain_scores_gemma":[0.99772304,0.00091717736,0.0006891691,0.00026503857,0.00022322766,0.00018239197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053719344,0.00020896098,0.00026146014,0.0016010009,0.00018938485,0.00053898286,0.00026750576,0.00042075786,0.0029378836],"category_scores_gemma":[0.0027109706,0.00008502207,0.00011850671,0.0005570307,0.000403973,0.0002912945,0.00024810043,0.00028368557,0.0006130969],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080740725,0.00005629688,0.8420096,0.000071142385,0.000069803966,0.001480238,0.00021263695,0.00014773216,0.12961921,0.00055950694,0.00017066968,0.024795894],"study_design_scores_gemma":[0.000014177097,0.00027249297,0.9672502,0.000019572639,0.000046543195,0.014350697,0.00017616923,0.00041724136,0.015953183,0.0006447565,0.00084769225,0.0000071464306],"about_ca_topic_score_codex":0.00025043974,"about_ca_topic_score_gemma":0.00036187386,"teacher_disagreement_score":0.0029378836,"about_ca_system_score_codex":0.000117015705,"about_ca_system_score_gemma":0.000097539545,"threshold_uncertainty_score":0.00982821},"labels":[],"label_agreement":null},{"id":"W4313897405","doi":"10.1016/j.modpat.2022.100014","title":"Analysis of KRAS Mutations in Gastrointestinal Tract Adenocarcinomas Reveals Site-Specific Mutational Signatures","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of General Medical Sciences","keywords":"KRAS; Adenocarcinoma; Gastrointestinal tract; Pancreas; Missense mutation; Esophagus; Pathology; Stomach; Immunohistochemistry; Biology; Medicine; Mutation; Internal medicine; Colorectal cancer; Cancer research; Cancer; Gene; Genetics","score_opus":0.05239659639387061,"score_gpt":0.3504947091566001,"score_spread":0.29809811276272946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313897405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99906164,0.00040036137,0.00022681864,0.0000044367443,8.2008074e-7,0.0000047798108,0.00010885659,0.000008084703,0.0001842878],"genre_scores_gemma":[0.99910957,0.00017395371,0.000466341,0.0000061938244,0.000001327292,0.000004667169,0.0001592869,0.0000030377205,0.00007568721],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997249,0.00006514521,0.000039545288,0.00006709415,0.00006877845,0.000034450724],"domain_scores_gemma":[0.9995363,0.00011100211,0.00017702329,0.0000448236,0.00006870858,0.00006211264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037795777,0.000178025,0.00028126957,0.0020995513,0.00015513392,0.0003109222,0.00012911788,0.0002685868,0.00036202534],"category_scores_gemma":[0.0007831409,0.00017296858,0.00030029097,0.0008554086,0.00020144046,0.000112596106,0.00022939056,0.00012897034,0.00017841585],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039479535,0.000018371398,0.80414736,0.000058124177,0.00013642995,0.00071527145,0.00013521122,0.00029323105,0.18487096,0.000032367516,0.00003570393,0.009162235],"study_design_scores_gemma":[0.000002429478,0.000091042464,0.9877763,0.000004983154,0.000048305366,0.0021554644,0.00007182408,0.0003401783,0.009290198,0.000024647887,0.00019050781,0.0000041040807],"about_ca_topic_score_codex":0.0009830311,"about_ca_topic_score_gemma":0.0024764684,"teacher_disagreement_score":0.0020995513,"about_ca_system_score_codex":0.00014527627,"about_ca_system_score_gemma":0.00010912935,"threshold_uncertainty_score":0.0019988418},"labels":[],"label_agreement":null},{"id":"W4313897470","doi":"10.1016/j.modpat.2022.100044","title":"High-Grade Endometrial Stromal Sarcomas With YWHAE::NUTM2 Gene Fusion Exhibit Recurrent CDKN2A Alterations and Absence of p16 Staining is a Poor Prognostic Marker","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Sinai Health System; University of Toronto; Royal Jubilee Hospital","funders":"","keywords":"CDKN2A; Fluorescence in situ hybridization; Biology; Fusion gene; Cancer research; Carcinogenesis; Pathology; Immunohistochemistry; Endometrial stromal sarcoma; Stromal cell; Cancer; Gene; Medicine; Chromosome; Genetics","score_opus":0.03228352172753674,"score_gpt":0.28373947592233023,"score_spread":0.2514559541947935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313897470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99725986,0.00045704903,0.0006908906,0.000046642257,0.000008458142,0.00001338273,0.00016840453,0.000024284353,0.0013309736],"genre_scores_gemma":[0.9990387,0.000092177506,0.00043726314,0.000009930384,0.0000033252663,0.0000038037858,0.000110734916,0.000003607457,0.0003004383],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981767,0.000022096694,0.000026188722,0.00003599621,0.000056068577,0.000042082745],"domain_scores_gemma":[0.9996425,0.000056535457,0.0001419321,0.000047024227,0.00004752602,0.000064459455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024728285,0.00022501028,0.00019333277,0.0006349894,0.00021108582,0.00038800415,0.00016872432,0.00031701758,0.0015058911],"category_scores_gemma":[0.00060493394,0.00015989013,0.00014294453,0.0005131028,0.00028315192,0.00022909723,0.00037710747,0.00015144791,0.00037029744],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010476407,0.00005474199,0.4843485,0.000107389984,0.000110827226,0.026815651,0.0002992361,0.0003433333,0.47067082,0.000578725,0.00043628245,0.015186836],"study_design_scores_gemma":[0.00004495908,0.00029220482,0.77646124,0.000014924155,0.0001664782,0.117633425,0.0006436349,0.0016810312,0.09590471,0.00088273396,0.0062540676,0.000020533007],"about_ca_topic_score_codex":0.00041793205,"about_ca_topic_score_gemma":0.0010744649,"teacher_disagreement_score":0.0015058911,"about_ca_system_score_codex":0.00022244116,"about_ca_system_score_gemma":0.00016205816,"threshold_uncertainty_score":0.0050376654},"labels":[],"label_agreement":null},{"id":"W4313897526","doi":"10.1016/j.modpat.2022.100055","title":"Digital Quantification of Tumor Cellularity as a Novel Prognostic Feature of Non–Small Cell Lung Carcinoma","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Western University","funders":"Western University","keywords":"Adenocarcinoma; Medicine; Lung cancer; Pathology; Lung; Large cell; Carcinoma; Small-cell carcinoma; Cancer; Internal medicine","score_opus":0.022245806422430275,"score_gpt":0.269715883737463,"score_spread":0.24747007731503276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313897526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98784095,0.0012865474,0.0086011905,0.000043804663,0.000014804199,0.000057357844,0.00059908774,0.00013448016,0.0014218194],"genre_scores_gemma":[0.9925385,0.00022427387,0.0063067046,0.00001321068,0.000008380897,0.000028272558,0.0004956415,0.000006281422,0.00037869724],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999683,0.00006854423,0.000028635464,0.00006295679,0.00013057186,0.000026243346],"domain_scores_gemma":[0.99924505,0.00023852196,0.00022520113,0.00009377319,0.00015031,0.00004707165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063769944,0.00014217079,0.00021698551,0.0013953554,0.00013216933,0.00054628693,0.00019034979,0.00017380761,0.001023865],"category_scores_gemma":[0.0013850334,0.00012680146,0.00013434453,0.00098109,0.00026612167,0.00040480608,0.00029419098,0.00021048452,0.00014697025],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008876286,0.00012947735,0.63494796,0.0002530896,0.00014687862,0.0002637117,0.00018882805,0.0041482155,0.2739797,0.00061460695,0.000596713,0.08384321],"study_design_scores_gemma":[0.0000179679,0.00032153804,0.90527827,0.000018230223,0.00009182504,0.00083642616,0.0001643423,0.025981264,0.06460974,0.00045381428,0.0021945045,0.00003198427],"about_ca_topic_score_codex":0.001028014,"about_ca_topic_score_gemma":0.0019296774,"teacher_disagreement_score":0.0013953554,"about_ca_system_score_codex":0.0003422099,"about_ca_system_score_gemma":0.00016635572,"threshold_uncertainty_score":0.0034251213},"labels":[],"label_agreement":null},{"id":"W4315630467","doi":"10.1016/j.modpat.2022.100053","title":"Reply to Comment on HPV-independent, p53-Wild-type Vulvar Intraepithelial Neoplasia: A Review of Nomenclature and the Journey to Characterize Acanthotic Precursor Lesions of the Vulva","year":2023,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Vulva; Vulvar intraepithelial neoplasia; Medicine; Pathology; Vulvar neoplasm; Dermatology; Biology","score_opus":0.07764573297282232,"score_gpt":0.357650025908146,"score_spread":0.2800042929353237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4315630467","genre_codex":"commentary","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017374332,0.06490938,0.0002329559,0.7294648,0.20420155,0.000021201966,0.00025522252,0.000050145074,0.00069082744],"genre_scores_gemma":[0.0009810708,0.037283234,0.00018358626,0.81778145,0.14164034,0.000041080606,0.000092406066,0.00003072253,0.0019661165],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976792,0.00047392596,0.0005701687,0.0003764325,0.0007061833,0.00019413949],"domain_scores_gemma":[0.98959523,0.0057292767,0.0009554141,0.00022245386,0.0028479279,0.0006497494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004011255,0.0010074553,0.0026391654,0.00230913,0.00095159403,0.0023659384,0.0024581288,0.014089987,0.0044071916],"category_scores_gemma":[0.017942348,0.0005964558,0.0015015211,0.001702113,0.0025099386,0.005463297,0.0021127367,0.018099874,0.0060721696],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050601822,0.000009499072,0.00011957244,0.00069700833,0.00002637879,0.00043494714,0.00008837081,0.000028157734,0.00016451279,0.00074478704,0.9857567,0.011879466],"study_design_scores_gemma":[0.000076062715,0.00005152707,0.0006646804,0.0012566248,0.00006995835,0.0025028107,0.00020939435,0.000056291326,0.00020359963,0.0017471975,0.9930958,0.0000659821],"about_ca_topic_score_codex":0.0028743327,"about_ca_topic_score_gemma":0.0045732544,"teacher_disagreement_score":0.014089987,"about_ca_system_score_codex":0.0022035397,"about_ca_system_score_gemma":0.0028896264,"threshold_uncertainty_score":0.02121383},"labels":[],"label_agreement":null},{"id":"W4315630495","doi":"10.1016/j.modpat.2022.100057","title":"In Reply: Programmed Death-Ligand 1 (PD-L1) Immunohistochemistry Calibration","year":2023,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Health Authority","funders":"National Cancer Institute; National Institutes of Health","keywords":"Immunohistochemistry; Pathology; Medicine","score_opus":0.02819661316858195,"score_gpt":0.30054350351278414,"score_spread":0.2723468903442022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4315630495","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00033902453,0.0014332493,0.00020826237,0.9617727,0.034843218,0.00001539056,0.00003629984,0.00003073227,0.0013211585],"genre_scores_gemma":[0.004326564,0.0012905829,0.00044123604,0.9340421,0.055995025,0.000055318622,0.000038259885,0.00002261796,0.0037882274],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99665594,0.001036667,0.00043854755,0.00037761062,0.0010369517,0.0004542371],"domain_scores_gemma":[0.990507,0.004978836,0.00080550637,0.00043080343,0.0021463123,0.0011314835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038847995,0.0009132818,0.0012561465,0.000964085,0.0031263612,0.0039506834,0.0015081643,0.03906055,0.004030079],"category_scores_gemma":[0.025233902,0.00091871165,0.0010100477,0.0007997878,0.0034631123,0.0029144872,0.0016976115,0.03918987,0.0044460893],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058624097,0.00002522175,0.000948797,0.00007838212,0.000022540213,0.0023392804,0.0000856948,0.00007021948,0.00041547665,0.0015688877,0.9870395,0.0073473617],"study_design_scores_gemma":[0.00018343418,0.00010805528,0.0019904256,0.0003150007,0.000097887656,0.009437522,0.0005496677,0.0007692223,0.0010207522,0.010990067,0.97443944,0.000098534474],"about_ca_topic_score_codex":0.0019256739,"about_ca_topic_score_gemma":0.0035593605,"teacher_disagreement_score":0.03906055,"about_ca_system_score_codex":0.0038851593,"about_ca_system_score_gemma":0.002434227,"threshold_uncertainty_score":0.028189003},"labels":[],"label_agreement":null},{"id":"W4318022906","doi":"10.1016/j.modpat.2022.100085","title":"Grade and Estrogen Receptor Expression Identify a Subset of No Specific Molecular Profile Endometrial Carcinomas at a Very Low Risk of Disease-Specific Death","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Saskatchewan; Université de Montréal; University of Manitoba; McMaster University; University of Toronto; Dalhousie University; University of Calgary; McGill University; University of British Columbia","funders":"Canadian Institutes of Health Research; BC Cancer Foundation; Vancouver Coastal Health Research Institute; Michael Smith Health Research BC","keywords":"Lymphovascular invasion; Oncology; Internal medicine; Estrogen receptor; Hazard ratio; Disease; Univariate analysis; Stage (stratigraphy); Medicine; Progesterone receptor; Immunohistochemistry; Pathology; Multivariate analysis; Biology; Cancer; Breast cancer; Metastasis; Confidence interval","score_opus":0.0387300434373826,"score_gpt":0.2835103925904303,"score_spread":0.24478034915304772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318022906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99725145,0.0005489186,0.00041744852,0.000054592612,0.000008082316,0.000009732691,0.00020667134,0.000012279537,0.0014907494],"genre_scores_gemma":[0.99900526,0.00012428811,0.00014390955,0.000028554903,0.0000117246545,0.0000037221293,0.00028391505,0.000005326002,0.00039353283],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997814,0.000037524704,0.00002254657,0.000039522038,0.00003929953,0.00007964667],"domain_scores_gemma":[0.9994091,0.00012047587,0.0001594789,0.0000771272,0.000110884735,0.0001228701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023268949,0.0002548669,0.0005056966,0.0011503828,0.00043969892,0.0009809111,0.00028089815,0.00036566026,0.0016458334],"category_scores_gemma":[0.0010015144,0.00016961571,0.00033374233,0.000634967,0.00029480024,0.000297567,0.0003593716,0.00027631433,0.00055251975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071066676,0.000039344162,0.95682365,0.000028233388,0.000086805194,0.0008175911,0.00012768716,0.000094764335,0.033090193,0.0001734306,0.00017144538,0.007836268],"study_design_scores_gemma":[0.0000074122395,0.0001685662,0.9923069,0.0000062348654,0.00009301708,0.002844826,0.00040355165,0.00029791368,0.0026096134,0.00035019417,0.0009045371,0.0000072276193],"about_ca_topic_score_codex":0.0012301403,"about_ca_topic_score_gemma":0.0017324975,"teacher_disagreement_score":0.0016458334,"about_ca_system_score_codex":0.00017570335,"about_ca_system_score_gemma":0.00021480436,"threshold_uncertainty_score":0.00550586},"labels":[],"label_agreement":null},{"id":"W4318962934","doi":"10.1016/j.modpat.2023.100121","title":"Toker Cell Hyperplasia in the Nipple-Areolar Complex of Transmasculine Individuals","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute","funders":"National Cancer Institute; Beth Israel Deaconess Medical Center; Breast Cancer Research Foundation","keywords":"Cytokeratin; Androgen receptor; Hyperplasia; Pathology; Population; Medicine; Internal medicine; Immunohistochemistry","score_opus":0.04617493151314871,"score_gpt":0.3093283489391814,"score_spread":0.26315341742603265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318962934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99611086,0.0002704303,0.00028617692,0.000031219493,0.0000074005984,0.000017281438,0.00006542341,0.000023068487,0.0031882594],"genre_scores_gemma":[0.9990386,0.000075146534,0.00017448014,0.0000126064115,0.000008401069,0.00000346088,0.00002503171,0.00000410289,0.0006581833],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982625,0.00002080154,0.000013604306,0.000044270306,0.00004192052,0.000053120875],"domain_scores_gemma":[0.99976546,0.00005075123,0.000057742574,0.00003109114,0.000024426485,0.000070563525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001897375,0.00026604783,0.00018618636,0.00187963,0.00061706535,0.00047349514,0.00023980046,0.00042519782,0.005241193],"category_scores_gemma":[0.0006719288,0.00027863067,0.00014240714,0.0004923452,0.0004197313,0.00034806048,0.0005241992,0.0003058617,0.00061097974],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021789167,0.00029966407,0.56086725,0.00020565245,0.000073712785,0.2177126,0.0014315423,0.00029093365,0.18497916,0.0013703884,0.0006317957,0.029958416],"study_design_scores_gemma":[0.000038422797,0.00043377824,0.61261785,0.000022136564,0.00008454389,0.36667,0.0012815236,0.0010563973,0.014363681,0.00065868825,0.002747096,0.000025923098],"about_ca_topic_score_codex":0.0006111169,"about_ca_topic_score_gemma":0.0008010471,"teacher_disagreement_score":0.005241193,"about_ca_system_score_codex":0.00016894536,"about_ca_system_score_gemma":0.00014593171,"threshold_uncertainty_score":0.01753354},"labels":[],"label_agreement":null},{"id":"W4319991672","doi":"10.1016/j.modpat.2022.100036","title":"Immunohistochemical Demonstration of Merlin/NF2 Loss in Mesothelioma","year":2023,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Merlin (protein); Mesothelioma; Immunohistochemistry; Pathology; Medicine; Internal medicine; Cancer","score_opus":0.017413870074154614,"score_gpt":0.2724369760364663,"score_spread":0.2550231059623117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319991672","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32845885,0.014463841,0.0054880423,0.5426817,0.01976962,0.0001703548,0.0005090353,0.00046552008,0.08799302],"genre_scores_gemma":[0.90894413,0.0040305904,0.002224805,0.04959107,0.01989903,0.000048399354,0.0001233301,0.000045293094,0.015093318],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99973136,0.000052846473,0.000040195042,0.00003363579,0.00007956168,0.00006235286],"domain_scores_gemma":[0.999081,0.00042289222,0.00006111779,0.000091334696,0.00018296327,0.00016076922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006039318,0.00039204195,0.0003809836,0.0006419858,0.0008159166,0.0006561417,0.00073073,0.006175389,0.0016230196],"category_scores_gemma":[0.0026360094,0.0003371575,0.0004243428,0.00028078648,0.00073920167,0.0006797334,0.00033908576,0.0029544635,0.0009304016],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034757736,0.000069318914,0.014158648,0.00014608268,0.000034960638,0.8913044,0.0003655738,0.00022600169,0.015528049,0.0016717007,0.063074425,0.013073292],"study_design_scores_gemma":[0.00010159545,0.00019812268,0.025096016,0.0001332835,0.000096183314,0.85714316,0.00053715653,0.003195907,0.006476463,0.0043140757,0.10266697,0.00004094568],"about_ca_topic_score_codex":0.0013216888,"about_ca_topic_score_gemma":0.0020735848,"teacher_disagreement_score":0.006175389,"about_ca_system_score_codex":0.00093394663,"about_ca_system_score_gemma":0.0003017195,"threshold_uncertainty_score":0.0067762733},"labels":[],"label_agreement":null},{"id":"W4321378996","doi":"10.1016/j.modpat.2023.100142","title":"Testicular Juvenile Granulosa Cell Tumors Demonstrate Recurrent Loss of Chromosome 10 and Absence of Molecular Alterations Described in Ovarian Counterparts","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Testicular diseases and treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Pathology; Biology; Monosomy; Atypia; Chromosome; Karyotype; Medicine; Genetics; Gene","score_opus":0.014744034307580308,"score_gpt":0.26124570887554976,"score_spread":0.24650167456796945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321378996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99391633,0.0009198404,0.0013050877,0.000072848125,0.000033179942,0.0000089296545,0.00029132416,0.00007515929,0.0033772334],"genre_scores_gemma":[0.9977114,0.00029226925,0.0007818033,0.000016731152,0.000010321003,0.0000040409614,0.00019328285,0.000011933679,0.0009782696],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99978584,0.00002115887,0.000021461517,0.000043647004,0.00007152529,0.000056397403],"domain_scores_gemma":[0.99926716,0.0001372541,0.0002946005,0.000093453775,0.00006346647,0.00014400852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014316986,0.00027060686,0.00020378923,0.0010787905,0.00025228798,0.000469415,0.00020450457,0.0003121024,0.0020856566],"category_scores_gemma":[0.00059032714,0.00018296768,0.00016282364,0.0008071028,0.0005630283,0.0001630318,0.00039497018,0.00029965377,0.00044883447],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071980583,0.000040145344,0.14350927,0.00017516948,0.00007613875,0.06992093,0.0006944555,0.00024986942,0.7562237,0.0015523559,0.00050273864,0.026335344],"study_design_scores_gemma":[0.000053369033,0.00028581385,0.6157249,0.000030419082,0.00009845919,0.22406788,0.0010092711,0.0004718979,0.14235139,0.00092566165,0.014946946,0.00003409678],"about_ca_topic_score_codex":0.0015013118,"about_ca_topic_score_gemma":0.002626384,"teacher_disagreement_score":0.0020856566,"about_ca_system_score_codex":0.00020984908,"about_ca_system_score_gemma":0.0003058343,"threshold_uncertainty_score":0.0069772005},"labels":[],"label_agreement":null},{"id":"W4321503228","doi":"10.1016/j.modpat.2023.100145","title":"Classification of Vulvar Squamous Cell Carcinoma and Precursor Lesions by p16 and p53 Immunohistochemistry: Considerations, Caveats, and an Algorithmic Approach","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Centre for Advancing Health Outcomes; Vancouver General Hospital; University of British Columbia","funders":"Carraresi Foundation","keywords":"Vulvar intraepithelial neoplasia; Immunohistochemistry; Vulvar Carcinoma; Tissue microarray; Pathology; Lichen sclerosus; In situ hybridization; Vulva; Vulvar cancer; Biology; Medicine; Cancer research; Gene; Gene expression","score_opus":0.04071352915917022,"score_gpt":0.3245315174798202,"score_spread":0.28381798832064997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321503228","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17257077,0.035058897,0.6994936,0.04191737,0.0035938022,0.0012025813,0.0008825437,0.0018070169,0.04347347],"genre_scores_gemma":[0.5101249,0.0076263817,0.4685858,0.0049524633,0.0031889265,0.0006214699,0.001144767,0.00029779036,0.0034575418],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99479467,0.0020504433,0.0009926778,0.0005645405,0.0012600585,0.0003376883],"domain_scores_gemma":[0.9927107,0.0023856612,0.000644962,0.0013516045,0.002557713,0.00034934664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.013419256,0.0012006274,0.0021743132,0.0045180074,0.0018396457,0.0059882123,0.006518505,0.002099857,0.0016870028],"category_scores_gemma":[0.016079238,0.00064457575,0.0017559889,0.0017824449,0.0041810228,0.0039676446,0.0029686901,0.004115765,0.0015078764],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006571747,0.00049576827,0.21549338,0.0013789741,0.0004531162,0.0023777073,0.0014891307,0.009965671,0.008486304,0.077227354,0.021134378,0.66084105],"study_design_scores_gemma":[0.00041207825,0.0020386109,0.13878964,0.0031009945,0.0013606283,0.05419105,0.010160896,0.14915867,0.009027813,0.51196533,0.11926429,0.0005300369],"about_ca_topic_score_codex":0.004693525,"about_ca_topic_score_gemma":0.0077939807,"teacher_disagreement_score":0.013419256,"about_ca_system_score_codex":0.0012366399,"about_ca_system_score_gemma":0.0028864779,"threshold_uncertainty_score":0.07096863},"labels":[],"label_agreement":null},{"id":"W4323669890","doi":"10.1016/j.modpat.2023.100153","title":"Abnormal p53 Immunohistochemical Patterns Shed Light on the Aggressiveness of Oral Epithelial Dysplasia","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Oral Health Pathology and Treatment","field":"Dentistry","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Occupational Cancer Research Centre; BC Cancer Agency; University of British Columbia; Vancouver General Hospital","funders":"University of British Columbia","keywords":"Epithelial dysplasia; Dysplasia; Pathology; Basal (medicine); Immunohistochemistry; Leukoplakia; Biology; Malignant transformation; Acantholysis; Intraepithelial neoplasia; Epithelium; Keratin; Medicine; Cancer; Immunology","score_opus":0.026054266393059675,"score_gpt":0.30940512684055904,"score_spread":0.28335086044749935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323669890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9750093,0.011872296,0.0047603925,0.00043666302,0.00007063916,0.000015319829,0.00018435385,0.000095875024,0.0075550308],"genre_scores_gemma":[0.99472934,0.0034696786,0.00087258033,0.000044826465,0.000062033556,0.0000031736968,0.000063744075,0.0000075751936,0.0007470322],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997714,0.00004366694,0.000030137098,0.000036762136,0.00007168343,0.000046382695],"domain_scores_gemma":[0.9996977,0.0000834009,0.00005456409,0.000052991752,0.000075083815,0.00003630761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046939738,0.00028153812,0.0002572268,0.002065654,0.00031807626,0.00090284395,0.00021524905,0.00036823683,0.0012595142],"category_scores_gemma":[0.00052336673,0.00025152878,0.00017681459,0.0010111117,0.0008465693,0.00078761263,0.00037466612,0.000391747,0.00030059856],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048678537,0.000046170902,0.125507,0.00031151023,0.00006665561,0.0077212434,0.00064473145,0.0002677155,0.79837906,0.0038554582,0.0005551915,0.062158413],"study_design_scores_gemma":[0.0000294359,0.0003787498,0.6268567,0.00010344446,0.00031320433,0.045870963,0.002106285,0.002077573,0.2904437,0.0063603655,0.025396096,0.00006355596],"about_ca_topic_score_codex":0.0006266345,"about_ca_topic_score_gemma":0.0007469915,"teacher_disagreement_score":0.002065654,"about_ca_system_score_codex":0.00022925956,"about_ca_system_score_gemma":0.000219137,"threshold_uncertainty_score":0.0042134523},"labels":[],"label_agreement":null},{"id":"W4366978133","doi":"10.1016/j.modpat.2023.100198","title":"Identification of Potential Therapeutic Targets for Plasmablastic Lymphoma Through Gene Expression Analysis: Insights into RAS and Wnt Signaling Pathways","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Saskatchewan; University of Calgary","funders":"Alberta Cancer Foundation; Alberta Precision Laboratories","keywords":"Wnt signaling pathway; Cancer research; Biology; Lymphoma; Signal transduction; Diffuse large B-cell lymphoma; Gene expression profiling; Transcriptome; Carcinogenesis; Gene; Gene expression; Immunology; Genetics","score_opus":0.023793770161419103,"score_gpt":0.27665268992169384,"score_spread":0.25285891976027475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366978133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91724086,0.04490245,0.027494539,0.0017541508,0.000110719404,0.00019480826,0.00097118126,0.0003012534,0.007029882],"genre_scores_gemma":[0.96662027,0.018447816,0.010812564,0.00027007522,0.000043422177,0.00010450259,0.00062534114,0.000025649353,0.0030503767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989736,0.000016109674,0.000006551219,0.00001590971,0.000040586638,0.000023434208],"domain_scores_gemma":[0.99994946,0.000011189265,0.000016746213,0.00000408597,0.000010673695,0.000007812625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023606334,0.0003150231,0.00035110724,0.0005212265,0.00015902088,0.0005091679,0.00020573712,0.00022969344,0.0011311667],"category_scores_gemma":[0.00014024308,0.00011155433,0.00026109072,0.0003959217,0.00023680883,0.00028087458,0.00013638898,0.0005985113,0.0002527047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032035235,0.00004156889,0.0011829307,0.00014479911,0.000022142942,0.00014481391,0.000019142115,0.00024759845,0.97241366,0.0005823591,0.00018808043,0.024692588],"study_design_scores_gemma":[0.00008804107,0.0009777898,0.014649707,0.00002692807,0.00016342678,0.0010338343,0.000111928515,0.0030584224,0.96178,0.0007167952,0.017379846,0.000013222033],"about_ca_topic_score_codex":0.00028199804,"about_ca_topic_score_gemma":0.00058370753,"teacher_disagreement_score":0.0011311667,"about_ca_system_score_codex":0.00036088788,"about_ca_system_score_gemma":0.00031047786,"threshold_uncertainty_score":0.0037841797},"labels":[],"label_agreement":null},{"id":"W4376253741","doi":"10.1016/j.modpat.2023.100212","title":"Corrigendum to “Grade and Estrogen Receptor Expression Identify a Subset of No Specific Molecular Profile Endometrial Carcinomas at a Very Low Risk of Disease-Specific Death”: [Modern Pathology 36 (2023) 100085]","year":2023,"lang":"en","type":"erratum","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Saskatchewan; Université de Montréal; University of Manitoba; McMaster University; University of Toronto; Dalhousie University; University of Calgary; McGill University; University of British Columbia","funders":"","keywords":"Endometrial cancer; Disease; Immunohistochemistry; Estrogen receptor; Oncology; Internal medicine; Medicine; Pathology; Molecular pathology; Carcinoma; Bioinformatics; Biology; Cancer research; Cancer; Breast cancer; Gene; Genetics","score_opus":0.041547247678972395,"score_gpt":0.28251068906477017,"score_spread":0.24096344138579778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376253741","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005923359,0.001245475,0.00015287104,0.069127046,0.9243079,0.000037762173,0.0005265241,0.00014896123,0.004394317],"genre_scores_gemma":[0.0024960896,0.0057607363,0.0010337763,0.25553703,0.53398156,0.00018737765,0.001637483,0.00037527547,0.19899063],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99552083,0.0005836927,0.00071959535,0.0006064595,0.0019785662,0.00059082214],"domain_scores_gemma":[0.97923535,0.0045517436,0.0010034197,0.0009969698,0.0128628155,0.001349631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035407853,0.0026363228,0.0032862208,0.0047398745,0.003983702,0.0044288277,0.0037651237,0.014761657,0.06910907],"category_scores_gemma":[0.03314786,0.0017151396,0.0032809381,0.002442477,0.0018751391,0.001702558,0.0026432602,0.011831787,0.06349987],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008451675,0.0000042962324,0.000031665008,0.000025766778,0.000004026495,0.000076786564,0.0000033912177,0.00000834053,0.000012367658,0.000057136338,0.9983028,0.0014650285],"study_design_scores_gemma":[0.00005968059,0.000031591284,0.0015902785,0.00033420185,0.000064547574,0.00038282792,0.00004433871,0.00018581186,0.00014702196,0.00058812177,0.9965287,0.000042969263],"about_ca_topic_score_codex":0.04384742,"about_ca_topic_score_gemma":0.07359088,"teacher_disagreement_score":0.06910907,"about_ca_system_score_codex":0.0051081963,"about_ca_system_score_gemma":0.0070984955,"threshold_uncertainty_score":0.23119289},"labels":[],"label_agreement":null},{"id":"W4377990763","doi":"10.1016/j.modpat.2023.100221","title":"Pathologic Criteria for the Diagnosis of Usual Interstitial Pneumonia vs Fibrotic Hypersensitivity Pneumonitis in Transbronchial Cryobiopsies","year":2023,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; St. Paul's Hospital; University of British Columbia Hospital","funders":"","keywords":"Honeycombing; Usual interstitial pneumonia; Hypersensitivity pneumonitis; Idiopathic pulmonary fibrosis; Medicine; Pathology; Fibrosis; Pulmonary fibrosis; Pneumonia; Lung; Internal medicine","score_opus":0.09619421291759644,"score_gpt":0.37567572223496914,"score_spread":0.2794815093173727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377990763","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010452562,0.99855465,0.00021804153,0.00017692332,0.00020600372,0.0000087988055,0.000029554902,0.000004421765,0.0006971359],"genre_scores_gemma":[0.0014888106,0.9964395,0.0007300462,0.00034974073,0.000379862,0.000014311969,0.00012803102,0.0000023237587,0.00046732937],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999572,0.00009096137,0.00010978651,0.00006360419,0.00012942922,0.00003435104],"domain_scores_gemma":[0.9990989,0.0004745739,0.00013583868,0.000023703124,0.0002298007,0.000037235703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011823192,0.00093287014,0.0021164939,0.0042760563,0.00028488084,0.0009952115,0.0014335287,0.0010410249,0.0023252598],"category_scores_gemma":[0.0018795908,0.00034612374,0.0007684621,0.0024035126,0.0009403989,0.001069166,0.0006585807,0.0016605224,0.0014959088],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009546527,0.000049091843,0.0009369782,0.02218202,0.0001821647,0.00081859936,0.00007917097,0.00024803143,0.001935871,0.0031728211,0.035415933,0.93488383],"study_design_scores_gemma":[0.00005579781,0.00010100692,0.0065256907,0.023005068,0.00078491576,0.010743332,0.00018415888,0.00027856903,0.0010008597,0.0037704909,0.95347327,0.000076832854],"about_ca_topic_score_codex":0.0020103813,"about_ca_topic_score_gemma":0.003552926,"teacher_disagreement_score":0.0042760563,"about_ca_system_score_codex":0.0006655621,"about_ca_system_score_gemma":0.0012576472,"threshold_uncertainty_score":0.007778764},"labels":[],"label_agreement":null},{"id":"W4378952948","doi":"10.1016/j.modpat.2023.100233","title":"Fully Automated Tumor Bud Assessment in Hematoxylin and Eosin-Stained Whole Slide Images of Colorectal Cancer","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"Swiss Cancer Foundation; Swiss Cancer Research Foundation; KWF Kankerbestrijding; European Commission","keywords":"Tumor budding; H&E stain; Digital pathology; Medicine; Colorectal cancer; Pathology; Histopathology; Immunohistochemistry; Metastasis; Cancer; Internal medicine","score_opus":0.01138601940535358,"score_gpt":0.29488468433259113,"score_spread":0.2834986649272376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378952948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6144051,0.0019219227,0.37169233,0.00028814233,0.000083408035,0.0002059775,0.0017365749,0.0073324465,0.0023340676],"genre_scores_gemma":[0.76235324,0.0006846073,0.2323856,0.00014836498,0.000032451244,0.00010695913,0.0024384402,0.00024533743,0.0016050672],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9997203,0.00005397088,0.000019608327,0.000089147296,0.000080118145,0.000036801786],"domain_scores_gemma":[0.9995365,0.00016456355,0.0000677736,0.00006318815,0.00012987865,0.000038087186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005470645,0.00045677696,0.00038855788,0.0009676836,0.00017184282,0.0007622775,0.000498774,0.0005005651,0.0008558558],"category_scores_gemma":[0.0013836997,0.00031377317,0.00042001167,0.0003590093,0.00017372775,0.00030750287,0.00057037413,0.0002580716,0.00057621946],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013355282,0.00018767687,0.04588007,0.0006330296,0.00023671152,0.0012757877,0.00031847262,0.04755205,0.4520064,0.0006898655,0.0054022754,0.44448206],"study_design_scores_gemma":[0.000039137467,0.0002610099,0.08321399,0.00006987229,0.000093509705,0.0015427757,0.00019643207,0.8015163,0.10732171,0.001460897,0.0042127115,0.00007166418],"about_ca_topic_score_codex":0.0019883893,"about_ca_topic_score_gemma":0.0037825457,"teacher_disagreement_score":0.0019883893,"about_ca_system_score_codex":0.00020934627,"about_ca_system_score_gemma":0.00035986284,"threshold_uncertainty_score":0.0039536953},"labels":[],"label_agreement":null},{"id":"W4381162988","doi":"10.1016/j.modpat.2023.100241","title":"Artificial Intelligence-Based PTEN Loss Assessment as an Early Predictor of Prostate Cancer Metastasis After Surgery: A Multicenter Retrospective Study","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University Health Network; Queen's University; Princess Margaret Cancer Centre; University of British Columbia; Hospital for Sick Children","funders":"National Cancer Institute; National Institutes of Health; Canary Foundation","keywords":"PTEN; Medicine; Tensin; Hazard ratio; Prostate cancer; Internal medicine; Metastasis; Oncology; Tissue microarray; Cancer; Pathology; Biology","score_opus":0.061643567711367274,"score_gpt":0.38491510160279613,"score_spread":0.3232715338914289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381162988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99922454,0.00020112426,0.00019673408,0.000010151491,0.000005441013,0.000017605647,0.00013285327,0.000002137578,0.00020942994],"genre_scores_gemma":[0.9993175,0.00009022321,0.000116120566,0.000016985145,0.000010773787,0.000016724478,0.0002987482,0.0000025553065,0.00013035642],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99942905,0.00015004691,0.000057324978,0.0002032787,0.0000887699,0.00007152957],"domain_scores_gemma":[0.9989785,0.00015807194,0.00034716236,0.00017798577,0.00017699132,0.00016132683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008390653,0.0003918809,0.00051844947,0.0006293818,0.0006342315,0.0008775506,0.00045511825,0.00047845667,0.0011407015],"category_scores_gemma":[0.0016746209,0.00036541422,0.0006897381,0.0009101675,0.0005230273,0.0005108005,0.0005486092,0.0005650333,0.0002749793],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008258022,0.00015464747,0.9960503,0.000017514405,0.00018187099,0.00012904409,0.000101754136,0.00006476583,0.0005276333,0.000034139062,0.00007682344,0.0018357784],"study_design_scores_gemma":[0.00006293027,0.0011138875,0.99597746,0.000009019249,0.00032974518,0.0007498297,0.00037028713,0.00052602397,0.00027099947,0.000081987266,0.0004927204,0.000015038843],"about_ca_topic_score_codex":0.001709267,"about_ca_topic_score_gemma":0.0017190418,"teacher_disagreement_score":0.001709267,"about_ca_system_score_codex":0.00033249555,"about_ca_system_score_gemma":0.00043189348,"threshold_uncertainty_score":0.004437506},"labels":[],"label_agreement":null},{"id":"W4381620770","doi":"10.1016/j.modpat.2023.100252","title":"Expanding the Clinicopathologic and Molecular Spectrum of Lipoblastoma-Like Tumor in a Series of 28 Cases","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; University of Calgary","funders":"","keywords":"Vulva; Lipoblastoma; Spermatic cord; Scrotum; Pathology; Immunohistochemistry; Medicine; Immunophenotyping; Surgical pathology; Biology; Anatomy; Lipoma; Antigen","score_opus":0.03362584179810484,"score_gpt":0.30523210525725514,"score_spread":0.2716062634591503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381620770","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967217,0.00071814033,0.0007377913,0.000056488716,0.000012121692,0.000033382552,0.000050419414,0.000021205322,0.0016487662],"genre_scores_gemma":[0.9983931,0.00042129387,0.0007128279,0.000024188546,0.00003075658,0.000021282347,0.00009465954,0.000008428284,0.00029342578],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999448,0.00006878196,0.00008513266,0.0001346177,0.00011865137,0.00014468012],"domain_scores_gemma":[0.99897313,0.0003038569,0.00019427619,0.00018692484,0.00011902953,0.00022274535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065943704,0.0008326585,0.00037454505,0.0033779447,0.001059998,0.0008282508,0.00064258935,0.0005509684,0.0012962631],"category_scores_gemma":[0.0021128824,0.0005905683,0.00042802113,0.0012935195,0.001328355,0.00094624807,0.001366209,0.0006980694,0.0006595414],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002957626,0.00023007901,0.60496134,0.00006863154,0.000042737047,0.35647807,0.0016903321,0.000543948,0.015829258,0.00035130267,0.00036686717,0.01914173],"study_design_scores_gemma":[0.000034721776,0.00029103682,0.23400316,0.000036910445,0.000086583976,0.7535759,0.0018872052,0.0012695659,0.0051108305,0.00036803223,0.0032938782,0.00004220434],"about_ca_topic_score_codex":0.00082966674,"about_ca_topic_score_gemma":0.0013160945,"teacher_disagreement_score":0.0033779447,"about_ca_system_score_codex":0.00042207033,"about_ca_system_score_gemma":0.0005022666,"threshold_uncertainty_score":0.0043364167},"labels":[],"label_agreement":null},{"id":"W4385951821","doi":"10.1016/j.modpat.2023.100306","title":"DNA Methylation Identifies Epigenetic Subtypes of Triple-Negative Breast Cancers With Distinct Clinicopathologic and Molecular Features","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; York University","keywords":"DNA methylation; Epigenetics; Methylation; Cancer research; Biology; Breast cancer; Proliferation index; Proliferative index; Pathology; Molecular biology; Oncology; Gene; Medicine; Genetics; Immunohistochemistry; Cancer; Immunology; Gene expression","score_opus":0.012320510691687964,"score_gpt":0.2718122987843127,"score_spread":0.25949178809262474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385951821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99846786,0.00028786418,0.00036655428,0.000035896224,0.0000033828755,0.0000053007,0.00010799345,0.000008589833,0.0007165613],"genre_scores_gemma":[0.9993957,0.000106669155,0.00016002005,0.000009572476,0.000005855713,0.000004328687,0.00013511251,0.0000030380054,0.00017968612],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999838,0.000019621357,0.000018057708,0.000035875004,0.000043513784,0.00004487597],"domain_scores_gemma":[0.99970585,0.000058461876,0.0001116968,0.000031733678,0.000038321225,0.00005393774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028602444,0.00022121552,0.0003085545,0.0009888154,0.00021105121,0.00044833866,0.00022658662,0.00027717635,0.0011278829],"category_scores_gemma":[0.000670493,0.00014209679,0.00016382358,0.0004985856,0.0003084401,0.00020686007,0.00043227465,0.0002241093,0.00018854578],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014373987,0.000038781593,0.7451689,0.000054409,0.000104934625,0.0018892142,0.00061881944,0.00018125994,0.23317699,0.0006098027,0.000195591,0.01652388],"study_design_scores_gemma":[0.000017582428,0.0001588582,0.97424024,0.000008668462,0.00008458195,0.009614406,0.0007585414,0.0006039144,0.012949668,0.0006690495,0.00088205707,0.000012391602],"about_ca_topic_score_codex":0.0007023993,"about_ca_topic_score_gemma":0.0012273671,"teacher_disagreement_score":0.0011278829,"about_ca_system_score_codex":0.00020996596,"about_ca_system_score_gemma":0.00019052901,"threshold_uncertainty_score":0.0037730932},"labels":[],"label_agreement":null},{"id":"W4385951874","doi":"10.1016/j.modpat.2023.100305","title":"Comprehensive Molecular Characterization of Polymorphous Adenocarcinoma, Cribriform Subtype: Identifying Novel Fusions and Fusion Partners","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network; Sinai Health System; University of Toronto","funders":"National Cancer Institute; National Institutes of Health","keywords":"Cribriform; Fluorescence in situ hybridization; Fusion gene; Biology; Adenocarcinoma; Gene; DNA sequencing; Computational biology; Pathology; Genetics; Carcinoma; Cancer; Medicine","score_opus":0.053717027330999034,"score_gpt":0.3125806710976573,"score_spread":0.25886364376665827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385951874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9699342,0.011146617,0.010139291,0.00061508524,0.000055409564,0.0001177269,0.0034865083,0.00021806455,0.0042870413],"genre_scores_gemma":[0.9840501,0.0033794749,0.0067963745,0.00018513651,0.00002613896,0.00005294465,0.0038312897,0.00003924701,0.0016392653],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999663,0.000019537601,0.000032589804,0.000083602885,0.00013974757,0.00006155291],"domain_scores_gemma":[0.99979275,0.00003940972,0.000056035693,0.000035367975,0.000042590334,0.00003392066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045359696,0.00038876038,0.00044193296,0.0015131991,0.0005612992,0.0009952267,0.0003797046,0.00058508164,0.0016994479],"category_scores_gemma":[0.000592285,0.00022409609,0.0004465241,0.0011411437,0.0003250501,0.0004733742,0.0005033207,0.00067834725,0.00046250215],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036498497,0.00006753997,0.05573167,0.00032840614,0.00017272828,0.0027349256,0.00024292035,0.00083532144,0.8791267,0.0013275731,0.0015944869,0.057472713],"study_design_scores_gemma":[0.00010111664,0.00053466577,0.35383564,0.0001658671,0.00096022105,0.0517549,0.0013110318,0.012616043,0.48088136,0.0035977657,0.094162844,0.00007862598],"about_ca_topic_score_codex":0.0017516329,"about_ca_topic_score_gemma":0.0034933581,"teacher_disagreement_score":0.0017516329,"about_ca_system_score_codex":0.0006162942,"about_ca_system_score_gemma":0.000613874,"threshold_uncertainty_score":0.00568521},"labels":[],"label_agreement":null},{"id":"W4386242967","doi":"10.1016/j.modpat.2023.100321","title":"DNA Methylation Signature of Synchronous Endometrioid Endometrial and Ovarian Carcinomas","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Grail; Friedberg Charitable Foundation; Cycle for Survival; National Cancer Institute; National Institutes of Health; Memorial Sloan-Kettering Cancer Center; Breast Cancer Research Foundation","keywords":"Epigenetics; DNA methylation; Biology; Ovarian carcinoma; Ovarian cancer; Cancer research; Ovary; Methylation; Endometrial cancer; Carcinoma; Pathology; Oncology; Medicine; Cancer; DNA; Gene; Genetics; Gene expression","score_opus":0.022680247187508683,"score_gpt":0.2770520130189587,"score_spread":0.25437176583145005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386242967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982869,0.0004525005,0.00033837114,0.000033647622,0.0000055995256,0.0000044370727,0.00022780642,0.000011812542,0.000638817],"genre_scores_gemma":[0.9992405,0.000121629164,0.00022555538,0.000014148663,0.0000053040485,0.0000031541645,0.00014391694,0.0000025739023,0.00024308474],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99989355,0.0000131996185,0.000008988713,0.000030478568,0.000026716803,0.000027159123],"domain_scores_gemma":[0.9998418,0.000036267367,0.000051102234,0.000012352078,0.000025968353,0.00003237737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012597843,0.00009810482,0.00019351074,0.00065689103,0.00014149255,0.00023799649,0.000105368366,0.000167797,0.0010603166],"category_scores_gemma":[0.00051769667,0.00011252997,0.000107445216,0.00034916372,0.000111406356,0.00010946588,0.00018152571,0.0001317943,0.00013817093],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016989507,0.000037114598,0.5218692,0.00010027883,0.000111672016,0.0017986909,0.00034051272,0.00034109093,0.44085613,0.00024721213,0.00036259662,0.03223664],"study_design_scores_gemma":[0.000018482933,0.00019569896,0.9645765,0.0000090148405,0.00007852284,0.0059977244,0.00024900236,0.0013631321,0.025605047,0.00022943875,0.0016687323,0.000008947076],"about_ca_topic_score_codex":0.00096549647,"about_ca_topic_score_gemma":0.001771173,"teacher_disagreement_score":0.0010603166,"about_ca_system_score_codex":0.00015098967,"about_ca_system_score_gemma":0.0001586648,"threshold_uncertainty_score":0.0035470724},"labels":[],"label_agreement":null},{"id":"W4386400658","doi":"10.1016/j.modpat.2023.100325","title":"Crohn’s Disease Features in Anastomotic Biopsies from Patients With and Without Crohn’s Disease: Diagnostic and Prognostic Value","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Crohn's disease; Disease; Anastomosis; Gastroenterology; Internal medicine; Metaplasia; Exacerbation; Biopsy; Diverticular disease; Scars; Pathology; Surgery","score_opus":0.005020886449935829,"score_gpt":0.2171030681704311,"score_spread":0.21208218172049526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386400658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99885976,0.00048504848,0.000060552356,0.00003113611,0.000011696169,0.0000030657727,0.00006124603,0.0000026141172,0.00048492613],"genre_scores_gemma":[0.999645,0.00010942469,0.00007475535,0.000015445657,0.000022234919,0.0000021993308,0.00009042448,0.0000011491793,0.0000392893],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99961984,0.00010396551,0.000053266594,0.00007742982,0.000057348607,0.000088188535],"domain_scores_gemma":[0.99842775,0.00063980796,0.0003324082,0.00008195666,0.00014542212,0.00037260813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000544255,0.00037785523,0.00044489664,0.0018869773,0.00040348133,0.00074842264,0.00027179185,0.0007086996,0.0010340499],"category_scores_gemma":[0.0033091877,0.00019306898,0.00026961305,0.0008573275,0.00045505422,0.00068667415,0.00055798853,0.00041722346,0.00020216007],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005325563,0.00002271106,0.99605286,0.000009241366,0.00002599821,0.00046815214,0.000060575763,0.000021984493,0.0012586694,0.000010563416,0.000025189727,0.0015115128],"study_design_scores_gemma":[0.000010185254,0.0001456463,0.9968581,0.000006697283,0.000032607295,0.002149021,0.0002410852,0.00016927878,0.00024663768,0.000031263862,0.000105311876,0.0000040881223],"about_ca_topic_score_codex":0.00064828456,"about_ca_topic_score_gemma":0.0009612733,"teacher_disagreement_score":0.0018869773,"about_ca_system_score_codex":0.00020904747,"about_ca_system_score_gemma":0.00013907664,"threshold_uncertainty_score":0.0034592748},"labels":[],"label_agreement":null},{"id":"W4386759743","doi":"10.1016/j.modpat.2023.100333","title":"Nested and Large Nested Subtypes of Urothelial Carcinoma of the Upper Urinary Tract: A Multi-institutional Study","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"School of Medicine, University of Alabama at Birmingham","keywords":"Bladder cancer; Exome sequencing; Urothelial carcinoma; Carcinoma; Medicine; Microsatellite instability; Pathology; Urinary system; Biology; Oncology; Cancer; Internal medicine; Gene; Mutation; Genetics; Microsatellite","score_opus":0.033140170152398084,"score_gpt":0.29817565388666045,"score_spread":0.2650354837342624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386759743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993463,0.00012460593,0.00017376278,0.0000074753007,0.0000028565946,0.000019990714,0.00013717022,0.0000026195594,0.00018527052],"genre_scores_gemma":[0.99909484,0.00007098621,0.00016701987,0.00002357588,0.000008868315,0.000015453743,0.00044681554,0.0000069574753,0.00016549442],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99852055,0.00031655413,0.00013355602,0.00048550102,0.00023835902,0.0003055536],"domain_scores_gemma":[0.99742043,0.00041095764,0.0006787181,0.0006233573,0.00027931808,0.00058724347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012591885,0.0004593199,0.0007718458,0.00087033387,0.001380732,0.0011383243,0.0007294575,0.00047387305,0.0017279028],"category_scores_gemma":[0.0025735106,0.000845063,0.0009471623,0.0011087307,0.0009121903,0.0012737621,0.0017135156,0.0006659444,0.00048771786],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003481941,0.00012499993,0.9966844,0.0000130847275,0.00007833038,0.00035456827,0.000463684,0.000039303573,0.00080667547,0.000052758514,0.00009420923,0.0009398471],"study_design_scores_gemma":[0.000038963626,0.00022190763,0.9943538,0.0000128298,0.00013092774,0.0021113001,0.0018829483,0.00025437298,0.00022404022,0.0000953252,0.00065251207,0.000021107222],"about_ca_topic_score_codex":0.007210201,"about_ca_topic_score_gemma":0.014496575,"teacher_disagreement_score":0.007210201,"about_ca_system_score_codex":0.00083814794,"about_ca_system_score_gemma":0.0008872341,"threshold_uncertainty_score":0.014336467},"labels":[],"label_agreement":null},{"id":"W4387478006","doi":"10.1016/j.modpat.2023.100351","title":"Portosinusoidal Vascular Disorder: A Heretofore Unrecognized Manifestation of Sickle Cell Disease?","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Hemoglobinopathies and Related Disorders","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"University of Chicago Medicine","keywords":"Pathology; Medicine; Von Willebrand factor; Portal hypertension; Portal vein thrombosis; Disease; Pathogenesis; CD34; Thrombosis; Gastroenterology; Internal medicine; Cirrhosis; Biology","score_opus":0.008869864112051857,"score_gpt":0.23664191330002526,"score_spread":0.22777204918797342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387478006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8139932,0.08783464,0.008738845,0.042900242,0.0029541752,0.00009598127,0.00048185358,0.00037680927,0.042624254],"genre_scores_gemma":[0.97256327,0.015921948,0.0020406453,0.0030054445,0.004564959,0.000010568762,0.00012336853,0.000022501217,0.0017473019],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99975103,0.00003247344,0.000027472732,0.00006433882,0.000049710598,0.000074969554],"domain_scores_gemma":[0.99936885,0.00022711743,0.00015766449,0.00005287943,0.000050286835,0.00014327341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024645316,0.0006462202,0.0006546901,0.0010012324,0.00068850437,0.0011344613,0.000742533,0.0037527706,0.0036298903],"category_scores_gemma":[0.00239889,0.0002828268,0.0003308967,0.00082397007,0.0013299095,0.0021545517,0.00066087,0.0016091557,0.00100298],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015906327,0.00004377938,0.018738115,0.00014299,0.000021549815,0.9577904,0.00021500295,0.00008683268,0.003990254,0.0034699584,0.0023077538,0.01303424],"study_design_scores_gemma":[0.000018272114,0.000047475143,0.0076806094,0.00006836459,0.000031382624,0.9838553,0.00029011245,0.00033161943,0.00072963483,0.0032428617,0.0036876048,0.000016843385],"about_ca_topic_score_codex":0.00055905536,"about_ca_topic_score_gemma":0.00047942606,"teacher_disagreement_score":0.0037527706,"about_ca_system_score_codex":0.00042885632,"about_ca_system_score_gemma":0.00050455786,"threshold_uncertainty_score":0.012143195},"labels":[],"label_agreement":null},{"id":"W4387563287","doi":"10.1016/j.modpat.2023.100348","title":"Utilization of p53 and p16 Immunohistochemistry in the Classification of Human Papillomavirus–Associated, p53 Wild-Type, and p53 Abnormal Oral Epithelial Dysplasia","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Head and Neck Cancer Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia; University of Alberta; Vancouver General Hospital","funders":"University of British Columbia","keywords":"Immunohistochemistry; Human papillomavirus; Pathology; Dysplasia; P53 protein; P53 expression; Biology; Epithelial dysplasia; Medicine; Internal medicine","score_opus":0.057539382744760344,"score_gpt":0.3429017956828452,"score_spread":0.28536241293808484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387563287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943165,0.0017934626,0.0014955923,0.000039992094,0.000025147494,0.000035023924,0.000038840742,0.000013162536,0.002242291],"genre_scores_gemma":[0.9972779,0.00074048404,0.0016235847,0.000011805431,0.000017573611,0.000010220326,0.000043424065,0.0000034797158,0.0002715397],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989957,0.00033212124,0.00018925415,0.000110749694,0.00020368939,0.00016851595],"domain_scores_gemma":[0.9986614,0.00037197839,0.00017618183,0.00014684942,0.00046748293,0.00017604527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034235548,0.00038650844,0.0002526953,0.0036398843,0.00041858735,0.00078148,0.00044601745,0.0003404003,0.0008984422],"category_scores_gemma":[0.0024628642,0.00022920492,0.00034516994,0.0009075194,0.0009077123,0.0009687177,0.00046883797,0.00033386424,0.00019747685],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087365636,0.00010965486,0.91380376,0.00010037633,0.00009546889,0.0016815573,0.00040461155,0.00016524341,0.05959619,0.00032468583,0.00007142247,0.022773389],"study_design_scores_gemma":[0.000038138645,0.0006942279,0.9383383,0.000067938534,0.00036480706,0.012542103,0.0020751844,0.004422515,0.03814685,0.00057151116,0.0027017642,0.00003667016],"about_ca_topic_score_codex":0.0029371085,"about_ca_topic_score_gemma":0.004439258,"teacher_disagreement_score":0.0036398843,"about_ca_system_score_codex":0.00039501296,"about_ca_system_score_gemma":0.0005469003,"threshold_uncertainty_score":0.018105686},"labels":[],"label_agreement":null},{"id":"W4388295602","doi":"10.1016/j.modpat.2023.100374","title":"Dedifferentiated and Undifferentiated Ovarian Carcinoma: An Aggressive and Molecularly Distinct Ovarian Tumor Characterized by Frequent SWI/SNF Complex Inactivation","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Spinal Cord Injury BC; University of Calgary; University of Alberta; McGill University Health Centre","funders":"University of Alberta; Alberta Cancer Foundation; Women and Children's Health Research Institute; Children's Health Research Institute","keywords":"Ovarian carcinoma; Pathology; Medicine; Ovarian cancer; Ovarian carcinomas; Epithelial ovarian carcinoma; Biology; Internal medicine; Cancer","score_opus":0.018295640488014693,"score_gpt":0.2532397671787703,"score_spread":0.2349441266907556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388295602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643314,0.00092864834,0.0010110721,0.000042546955,0.000010936741,0.000027650052,0.00024376722,0.000025186155,0.0012770522],"genre_scores_gemma":[0.9982318,0.00026178185,0.0006237916,0.000018787994,0.000009166313,0.000007995336,0.00028295003,0.000005622933,0.0005581522],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99987125,0.000012174523,0.000024377869,0.000025962632,0.000032531345,0.000033617434],"domain_scores_gemma":[0.9997886,0.000048968686,0.000042282543,0.000031990676,0.000020679037,0.00006746075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018043493,0.00033816154,0.00034770195,0.00093853404,0.00021193082,0.0006130239,0.00025190075,0.00037449505,0.00075885147],"category_scores_gemma":[0.000451185,0.00021310039,0.0001312952,0.00072164804,0.00035407685,0.00026062736,0.0005422847,0.0002049856,0.00023458495],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023236163,0.00014626897,0.19112454,0.0003355882,0.00007186855,0.11160124,0.00079371675,0.00035863218,0.663371,0.0025362675,0.0003348983,0.027002266],"study_design_scores_gemma":[0.0001213107,0.0005538326,0.44383675,0.000030433226,0.00015930618,0.40338644,0.0010578624,0.0023396492,0.13359423,0.0016185896,0.013256201,0.000045283577],"about_ca_topic_score_codex":0.00047908595,"about_ca_topic_score_gemma":0.000724487,"teacher_disagreement_score":0.00093853404,"about_ca_system_score_codex":0.00020154957,"about_ca_system_score_gemma":0.0002759242,"threshold_uncertainty_score":0.0025386214},"labels":[],"label_agreement":null},{"id":"W4388461068","doi":"10.1016/j.modpat.2023.100381","title":"A Preliminary Investigation into Search and Matching for Tumor Discrimination in World Health Organization Breast Taxonomy Using Deep Networks","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Blackberry (Canada); University of Waterloo","funders":"World Health Organization; Memorial Sloan-Kettering Cancer Center; Government of Ontario; Mayo Foundation for Medical Education and Research; Singapore General Hospital; Mayo Clinic","keywords":"Breast cancer; Artificial intelligence; Taxonomy (biology); Computer science; Digital pathology; Deep learning; Histopathology; Pathology; Medicine; Information retrieval; Cancer; Biology; Internal medicine","score_opus":0.04410164583141942,"score_gpt":0.2842847001902203,"score_spread":0.24018305435880086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388461068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9310838,0.001161139,0.056949966,0.0009873381,0.00010421836,0.00013481198,0.00227635,0.0018350969,0.0054672644],"genre_scores_gemma":[0.95165557,0.00027785875,0.042330705,0.00012795765,0.000023120463,0.000046450095,0.003207833,0.00004221355,0.0022882603],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99934334,0.00015563476,0.000042944826,0.00016431283,0.00013806949,0.00015569889],"domain_scores_gemma":[0.99872357,0.0005043719,0.00010901191,0.00023772477,0.00034185193,0.00008341909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001495416,0.00054395397,0.00034831476,0.0015613678,0.00041466896,0.00087504735,0.000983225,0.0007781498,0.0015869115],"category_scores_gemma":[0.0046551097,0.0001932762,0.0005754407,0.0013087378,0.0003291458,0.0020290792,0.0006651839,0.0006107655,0.00041086972],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010519347,0.0010452726,0.12830614,0.00039046694,0.0003317182,0.0005824991,0.0005484292,0.16586375,0.019451225,0.0076443916,0.016227284,0.6585569],"study_design_scores_gemma":[0.000015846628,0.00019503487,0.013126742,0.000032432734,0.00004125328,0.00013659692,0.00024688244,0.9726255,0.008403542,0.0025815102,0.0025820644,0.000012579571],"about_ca_topic_score_codex":0.019215163,"about_ca_topic_score_gemma":0.022802208,"teacher_disagreement_score":0.019215163,"about_ca_system_score_codex":0.0010342106,"about_ca_system_score_gemma":0.0008914554,"threshold_uncertainty_score":0.038206637},"labels":[],"label_agreement":null},{"id":"W4388680196","doi":"10.1016/j.modpat.2023.100384","title":"Canadian Multicentric Pan-TRK (CANTRK) Immunohistochemistry Harmonization Study","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; Royal University Hospital; SickKids Foundation; Hospital for Sick Children; Université de Montréal; Hôpital Maisonneuve-Rosemont; William Osler Health System; University of British Columbia; BC Cancer Agency; Sunnybrook Health Science Centre; Queen's University; University of Ottawa; Dalhousie University; McMaster University; Institut universitaire de cardiologie et de pneumologie de Québec; University of Manitoba; University of Calgary; Health Sciences Centre; University of Alberta; University Health Network; Ottawa Hospital; McGill University; McGill University Health Centre; University of Toronto; Saskatchewan Health Authority; Centre Hospitalier de l’Université de Montréal; Université Laval","funders":"Bayer Canada","keywords":"Trk receptor; Immunohistochemistry; Staining; Medicine; Immunostaining; Monoclonal antibody; Pathology; H&E stain; Antibody; Biology; Internal medicine; Immunology; Neurotrophin","score_opus":0.022695377752655684,"score_gpt":0.3197230274370713,"score_spread":0.29702764968441564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388680196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9393639,0.0019641502,0.004673818,0.0018905476,0.00010552449,0.0034354876,0.022791183,0.00021637997,0.025559044],"genre_scores_gemma":[0.97839844,0.0006576707,0.0055878637,0.0012608487,0.000038928014,0.0009029494,0.009803233,0.00009028026,0.0032597699],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99317133,0.0012193546,0.0003250479,0.0012651096,0.003195035,0.000824153],"domain_scores_gemma":[0.98920727,0.00055458455,0.0011595477,0.0012208679,0.0065253214,0.0013324312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008943299,0.00055608805,0.0005066866,0.0012015358,0.0027902208,0.0011323323,0.0017779125,0.00054513506,0.0021859934],"category_scores_gemma":[0.007586365,0.00039528587,0.00058227865,0.0031281924,0.0008645782,0.00039004924,0.0012802954,0.0005316675,0.0003706342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004503783,0.00057616783,0.868879,0.0005131347,0.0011710818,0.00067650573,0.0027747343,0.0020303624,0.006825218,0.003849814,0.03922508,0.068975136],"study_design_scores_gemma":[0.0003193758,0.0004570948,0.9671546,0.00005583598,0.0001954768,0.0003874673,0.0007369844,0.00070916675,0.0008095236,0.0001261631,0.029004287,0.000044051016],"about_ca_topic_score_codex":0.9286042,"about_ca_topic_score_gemma":0.960004,"teacher_disagreement_score":0.071395814,"about_ca_system_score_codex":0.03214386,"about_ca_system_score_gemma":0.04407304,"threshold_uncertainty_score":0.23322111},"labels":[],"label_agreement":null},{"id":"W4388906395","doi":"10.1016/j.modpat.2023.100388","title":"Comprehensive Genomic Analysis of Cemento-Ossifying Fibroma","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; McGill University Health Centre; McGill University","funders":"Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Missense mutation; KRAS; Biology; Exome sequencing; Genetics; Exome; Whole genome sequencing; Mutation; Gene; Genome","score_opus":0.056780093363559145,"score_gpt":0.32205337431964054,"score_spread":0.2652732809560814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388906395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96713066,0.005578058,0.0094448235,0.0010058058,0.000087941575,0.000066796914,0.011515179,0.00019589109,0.0049748444],"genre_scores_gemma":[0.9827943,0.0017229347,0.0057922653,0.0004864639,0.000041909316,0.00003768676,0.007616276,0.00006329011,0.0014448604],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997253,0.00002140556,0.000017168335,0.00009579209,0.00008680289,0.00005358159],"domain_scores_gemma":[0.9998062,0.0000633501,0.000050564882,0.000023374043,0.000029846658,0.000026764093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020078177,0.00021994249,0.0003063041,0.0011179214,0.00046946222,0.00049200293,0.00024256171,0.00034157414,0.002031453],"category_scores_gemma":[0.00060284114,0.00017716257,0.00042835195,0.00087741605,0.00020385452,0.00013220463,0.0004697982,0.0004670359,0.00038290123],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007318138,0.00014137452,0.14630279,0.0005733785,0.00069968816,0.004493115,0.00067352684,0.0027302145,0.7076967,0.002778583,0.005333656,0.12784524],"study_design_scores_gemma":[0.00008336137,0.00034147664,0.86716276,0.00016113424,0.0014600598,0.010076209,0.0006202461,0.004586715,0.050715476,0.003808356,0.060931776,0.00005245676],"about_ca_topic_score_codex":0.002095438,"about_ca_topic_score_gemma":0.005640296,"teacher_disagreement_score":0.002095438,"about_ca_system_score_codex":0.00029480137,"about_ca_system_score_gemma":0.0005154288,"threshold_uncertainty_score":0.006795883},"labels":[],"label_agreement":null},{"id":"W4390064509","doi":"10.1016/j.modpat.2023.100402","title":"Sarcomas With RAD51B Fusions Are Associated With a Heterogeneous Phenotype","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Tuberous Sclerosis Complex Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"National Cancer Institute; Cycle for Survival","keywords":"Pathology; Biology; Pleomorphism (cytology); Epithelioid cell; Immunohistochemistry; Eosinophilic; Medicine","score_opus":0.060225707185539074,"score_gpt":0.2911578142095902,"score_spread":0.23093210702405112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390064509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99458766,0.00057615637,0.0013042261,0.00004900695,0.000012054075,0.000018695195,0.0003025091,0.00006623106,0.003083334],"genre_scores_gemma":[0.99848783,0.00020569589,0.0003822509,0.000017546638,0.00001403039,0.000009407475,0.00031604513,0.000022931663,0.0005441893],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995468,0.000068280526,0.00006886517,0.000119142765,0.00011389463,0.00008294605],"domain_scores_gemma":[0.9990472,0.00022597636,0.00040608514,0.00012561464,0.00007440178,0.00012064261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003351772,0.00045904113,0.00036331755,0.0016310518,0.0003888245,0.00053095014,0.00027444056,0.00038666083,0.0027316501],"category_scores_gemma":[0.0008980279,0.0002470041,0.0002704946,0.00092435605,0.00051623315,0.00029809625,0.00086374534,0.000291068,0.0011050923],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012779025,0.000114861876,0.07788731,0.00011266367,0.00012916767,0.030450206,0.0004251696,0.000408331,0.8753872,0.001576785,0.00054880534,0.011681593],"study_design_scores_gemma":[0.00008851617,0.0005238084,0.5859536,0.000041366,0.00034063496,0.30796123,0.0009158287,0.0012532981,0.09165126,0.0023391969,0.0088752685,0.000056000976],"about_ca_topic_score_codex":0.00019329683,"about_ca_topic_score_gemma":0.00018327341,"teacher_disagreement_score":0.0027316501,"about_ca_system_score_codex":0.0001428076,"about_ca_system_score_gemma":0.00012506841,"threshold_uncertainty_score":0.009138286},"labels":[],"label_agreement":null},{"id":"W4390246186","doi":"10.1016/j.modpat.2023.100417","title":"Endometrial Pipelle Biopsy Computer-Aided Diagnosis: A Feasibility Study","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gynecological conditions and treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Radboud Universitair Medisch Centrum; Radboud Universiteit","keywords":"Biopsy; Medicine; Pathology; Hematopathology; Medical physics; Radiology; Biology","score_opus":0.0873089949842043,"score_gpt":0.3481218921854798,"score_spread":0.2608128972012755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390246186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912272,0.00046037007,0.005821799,0.00009885374,0.000019616891,0.00094945676,0.000077404286,0.0000382085,0.0013070691],"genre_scores_gemma":[0.98407114,0.00031974853,0.014616292,0.000079536076,0.00003814822,0.00036122612,0.00021126933,0.000010777443,0.00029191477],"study_design_codex":"observational","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9953649,0.0028806627,0.0002383124,0.00048137948,0.0008317896,0.00020294577],"domain_scores_gemma":[0.99003696,0.0064308993,0.00042423056,0.00083098735,0.0017429698,0.0005339572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00798767,0.00056412787,0.00035792514,0.00073172513,0.00029604658,0.0005561967,0.0007058928,0.00084380613,0.0017035421],"category_scores_gemma":[0.015348498,0.0003795772,0.0004573789,0.0003130408,0.0005571616,0.00085399847,0.00071872975,0.00034377276,0.0005654042],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.026400138,0.015407691,0.53174156,0.0011620689,0.00040804944,0.013905574,0.0033435794,0.005369579,0.098095834,0.00086430466,0.0010769655,0.3022247],"study_design_scores_gemma":[0.0033855694,0.18393306,0.67785734,0.00021181675,0.0005372455,0.043887366,0.003235099,0.04769349,0.029557033,0.0006655058,0.008805522,0.00023098598],"about_ca_topic_score_codex":0.0012565689,"about_ca_topic_score_gemma":0.0013788582,"teacher_disagreement_score":0.00798767,"about_ca_system_score_codex":0.00042235566,"about_ca_system_score_gemma":0.00061344967,"threshold_uncertainty_score":0.042243302},"labels":[],"label_agreement":null},{"id":"W4390637992","doi":"10.1016/j.modpat.2024.100423","title":"Molecular and Clinicopathologic Characterization of Mismatch Repair-Deficient Endometrial Carcinoma Not Related to MLH1 Promoter Hypermethylation","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Princess Margaret Cancer Centre; University of Toronto","funders":"Manchester Biomedical Research Centre; Leids Universitair Medisch Centrum; Universiteit Leiden; KWF Kankerbestrijding; National Institute for Health and Care Research","keywords":"MLH1; Pathology; DNA mismatch repair; Carcinoma; DNA methylation; Biology; Medicine; Cancer research; DNA; Gene; DNA repair; Genetics; Gene expression","score_opus":0.024833454134721326,"score_gpt":0.2948016088834344,"score_spread":0.26996815474871305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390637992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99460864,0.004308877,0.00021256348,0.000031643864,0.0000056476174,0.0000488138,0.00023399985,0.0000046066207,0.00054516655],"genre_scores_gemma":[0.99855286,0.0004937778,0.00030028762,0.000028883926,0.000010264238,0.000032414362,0.00050246983,0.0000019052648,0.000077167904],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99926025,0.000315736,0.00014763375,0.000120739474,0.00010743431,0.000048176254],"domain_scores_gemma":[0.9985078,0.00060834584,0.00037968336,0.0002320608,0.00010520124,0.0001667825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021096747,0.00019464696,0.00060217245,0.0008826808,0.00015573016,0.00052486645,0.0003301776,0.0003396379,0.000502644],"category_scores_gemma":[0.002835203,0.00025296697,0.00040220944,0.0006525857,0.0002714249,0.0002798943,0.00027176025,0.00026277718,0.00007889511],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0057727876,0.000102275786,0.96532017,0.00017317329,0.0004038398,0.00057959126,0.000046546284,0.00035446818,0.008230405,0.00005467489,0.00014043822,0.018821722],"study_design_scores_gemma":[0.00051953783,0.0018245792,0.98691493,0.000041028434,0.0007105983,0.0046229768,0.00008053795,0.0012438741,0.0025284286,0.00012712592,0.0013769895,0.000009436324],"about_ca_topic_score_codex":0.00038721802,"about_ca_topic_score_gemma":0.0010013088,"teacher_disagreement_score":0.0021096747,"about_ca_system_score_codex":0.00025394832,"about_ca_system_score_gemma":0.0002127143,"threshold_uncertainty_score":0.011157155},"labels":[],"label_agreement":null},{"id":"W4391888772","doi":"10.1016/j.modpat.2024.100452","title":"Whole-Genome Sequencing Analysis of Male Breast Cancer Unveils Novel Structural Events and Potential Therapeutic Targets","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"BRCA gene mutations in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Department of Pathology, Northwestern University; Weill Cornell Medicine; Weill Cornell Medical College; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine","keywords":"Breast cancer; Comparative genomic hybridization; Biology; ARID1A; Germline mutation; Cancer; Gene; Genetics; Genome; Medicine; Mutation","score_opus":0.013160223366248365,"score_gpt":0.2761377520637308,"score_spread":0.2629775286974824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391888772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9531944,0.011987216,0.022898898,0.0019007062,0.00009564276,0.00002001192,0.004827113,0.0005153531,0.00456074],"genre_scores_gemma":[0.9806214,0.0044699144,0.009205168,0.000567955,0.00007026373,0.000011142513,0.0025107483,0.00013141824,0.0024121292],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99992716,0.000009483116,0.0000030108708,0.000021390146,0.000025981224,0.000012970774],"domain_scores_gemma":[0.99987936,0.000039357546,0.000030909832,0.000013506081,0.000014394695,0.000022471366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001992196,0.00031688766,0.0003047568,0.00044999353,0.0002138639,0.00046275533,0.00020719763,0.00042575144,0.001421755],"category_scores_gemma":[0.00025406966,0.00019277575,0.00024181769,0.00038350653,0.00020618447,0.00022830305,0.00016932387,0.0004098485,0.00037677257],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028299875,0.000037979054,0.018323548,0.00019891786,0.00010415112,0.0010964742,0.00009586967,0.0009259975,0.9369783,0.0020924283,0.0013590625,0.038504407],"study_design_scores_gemma":[0.000042570755,0.00041511562,0.4089752,0.00006693597,0.00031486203,0.009729938,0.000269726,0.0067855204,0.52337724,0.0064660106,0.04350539,0.00005151671],"about_ca_topic_score_codex":0.0006802904,"about_ca_topic_score_gemma":0.0017701547,"teacher_disagreement_score":0.001421755,"about_ca_system_score_codex":0.00024865175,"about_ca_system_score_gemma":0.00025798182,"threshold_uncertainty_score":0.0047562122},"labels":[],"label_agreement":null},{"id":"W4394008668","doi":"10.1016/j.modpat.2024.100489","title":"Somatic Tumor Testing in Prostate Cancer: Experience of a Tertiary Care Center Including Pathologist-Driven Reflex Testing of Localized Tumors at Diagnosis","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Janssen Canada; AstraZeneca Canada","keywords":"Prostate cancer; Medicine; Genetic testing; Cancer; Oncology; Pathology; Internal medicine; Primary tumor; Metastasis","score_opus":0.07643797035752352,"score_gpt":0.37382606655097594,"score_spread":0.2973880961934524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394008668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99180216,0.000994224,0.00092494127,0.001964348,0.000066313296,0.000043855336,0.00017692319,0.0000853714,0.0039419136],"genre_scores_gemma":[0.99538827,0.00079497154,0.001416237,0.0011563078,0.00009381362,0.0000083787745,0.00017544703,0.000044754077,0.0009217339],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985613,0.00048767566,0.00011522264,0.00020548182,0.00025491518,0.00037540135],"domain_scores_gemma":[0.9953862,0.00083034235,0.00051194243,0.00015255492,0.00063098274,0.0024879666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016071888,0.0003921874,0.00025819146,0.00035886848,0.0013775227,0.0012654611,0.0008278148,0.00071037747,0.0036764648],"category_scores_gemma":[0.003949796,0.00040306099,0.00023852034,0.00071671413,0.0008522535,0.0007339214,0.0016749263,0.0011647852,0.00070976006],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005576255,0.0016982241,0.8542817,0.00018242531,0.00009533836,0.019641412,0.008859341,0.0013745184,0.00597425,0.0003957958,0.0094197765,0.09751963],"study_design_scores_gemma":[0.00007844405,0.0035076663,0.89805263,0.0002719677,0.00012514337,0.04153636,0.02961294,0.0039220587,0.0051057884,0.001019189,0.016617248,0.00015061536],"about_ca_topic_score_codex":0.008568509,"about_ca_topic_score_gemma":0.02645432,"teacher_disagreement_score":0.008568509,"about_ca_system_score_codex":0.0016348866,"about_ca_system_score_gemma":0.004050912,"threshold_uncertainty_score":0.017037213},"labels":[],"label_agreement":null},{"id":"W4394008680","doi":"10.1016/j.modpat.2024.100491","title":"Gastric Carcinoma in Autoimmune Gastritis: A Histopathologic and Molecular Study","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Regione del Veneto; Associazione Italiana per la Ricerca sul Cancro","keywords":"Microsatellite instability; Medicine; Pathology; Adenocarcinoma; CDX2; Internal medicine; Intestinal metaplasia; Cancer; Gastroenterology; Neuroendocrine tumors; Atypical hyperplasia; Immunohistochemistry; Biology","score_opus":0.015838236715218525,"score_gpt":0.25874548056107916,"score_spread":0.24290724384586063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394008680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98958194,0.0053734174,0.0006152809,0.00011492449,0.000029932307,0.000024678722,0.00005560577,0.000018903671,0.0041852007],"genre_scores_gemma":[0.9967618,0.0018364794,0.00057988224,0.000037273086,0.00009414882,0.00000954256,0.00007390502,0.000004662521,0.0006023298],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998276,0.00003792348,0.000024883875,0.000026373953,0.000037375612,0.000045754965],"domain_scores_gemma":[0.9996389,0.00010524852,0.000055561388,0.00005917627,0.00007677723,0.00006441178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007424668,0.00032995953,0.00020609189,0.002722488,0.0005682037,0.0005869281,0.00038692134,0.00052621216,0.002118769],"category_scores_gemma":[0.0005969794,0.0003259289,0.0002670845,0.000743671,0.0011449798,0.0008447156,0.0006086894,0.00031385335,0.000518074],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003697013,0.0003917407,0.55760777,0.00040483245,0.00014228014,0.05255243,0.00089439144,0.0002529671,0.3561134,0.0019639062,0.00041519135,0.025564084],"study_design_scores_gemma":[0.00013041319,0.0012009433,0.7801065,0.0000785041,0.00038679154,0.15401827,0.0025758564,0.0012086412,0.046791755,0.0012064354,0.012258168,0.000037710633],"about_ca_topic_score_codex":0.00047687712,"about_ca_topic_score_gemma":0.00049898465,"teacher_disagreement_score":0.002722488,"about_ca_system_score_codex":0.0002064337,"about_ca_system_score_gemma":0.00019926424,"threshold_uncertainty_score":0.0070880055},"labels":[],"label_agreement":null},{"id":"W4394018504","doi":"10.1016/j.modpat.2024.100473","title":"Separation of Benign From Malignant Mesothelial Proliferations Using YAP-TAZ Immunohistochemistry","year":2024,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Vancouver General Hospital; University of British Columbia","funders":"University of British Columbia","keywords":"Immunohistochemistry; Pathology; Staining; Mesothelial Cell; Medicine; Anatomical pathology","score_opus":0.020882066674025986,"score_gpt":0.29001777513062316,"score_spread":0.2691357084565972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394018504","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015356443,0.0065698987,0.004239848,0.93030536,0.03322068,0.00007289664,0.00010008989,0.00015278372,0.009982013],"genre_scores_gemma":[0.1977526,0.008127823,0.010350336,0.6360284,0.12207655,0.00027267355,0.00019465675,0.00012402683,0.025072897],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99921036,0.00017994412,0.00010576635,0.00008144481,0.000316057,0.00010644462],"domain_scores_gemma":[0.997421,0.0016067901,0.00016108359,0.00015499593,0.00034038557,0.00031570625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014852576,0.00040850276,0.0004147789,0.00071019336,0.0009100482,0.0010434963,0.00062829757,0.009096927,0.0013146639],"category_scores_gemma":[0.0059351698,0.0004572052,0.0004948822,0.00028536853,0.0016410274,0.0009416892,0.00052371353,0.009558545,0.0017041336],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093764195,0.00021260757,0.010270491,0.00033581178,0.00010299195,0.09371535,0.0004310371,0.00033325012,0.020855393,0.010743431,0.75923413,0.102827996],"study_design_scores_gemma":[0.00056544197,0.00040218962,0.015931971,0.0003026965,0.00021249603,0.14599189,0.00056600635,0.0055653127,0.016540337,0.03703317,0.7767696,0.00011883885],"about_ca_topic_score_codex":0.00092095346,"about_ca_topic_score_gemma":0.0023675999,"teacher_disagreement_score":0.009096927,"about_ca_system_score_codex":0.001385505,"about_ca_system_score_gemma":0.0006018884,"threshold_uncertainty_score":0.010052621},"labels":[],"label_agreement":null},{"id":"W4394796261","doi":"10.1016/j.modpat.2024.100492","title":"Molecular Characterization of Juxtaglomerular Cell Tumors: Evidence of Alterations in MAPK–RAS Pathway","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Pathology; Biology; Medicine","score_opus":0.02463573582629505,"score_gpt":0.2710835301232118,"score_spread":0.24644779429691674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394796261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941729,0.0016949665,0.001625619,0.00007756134,0.0000112101025,0.000015725265,0.00015528616,0.00004149145,0.0022052047],"genre_scores_gemma":[0.99760866,0.00045486362,0.000948696,0.000018932897,0.000013107782,0.000010498824,0.00015343643,0.000006159674,0.0007855618],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99991703,0.000010645089,0.000007629914,0.0000167957,0.000029235984,0.000018733257],"domain_scores_gemma":[0.99986076,0.00002682686,0.00003491456,0.000016693673,0.000026146128,0.000034618046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017041784,0.00020929516,0.00017128207,0.001293381,0.00023769261,0.00037745273,0.00019971599,0.00025564275,0.001976695],"category_scores_gemma":[0.00018923395,0.000095645846,0.00015518304,0.0004468637,0.00024341102,0.00031314619,0.00017940339,0.0002796793,0.00035529042],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005253685,0.00008620636,0.03532477,0.00008693753,0.000043351378,0.0017411675,0.000077648016,0.00009858023,0.95234674,0.00042819706,0.00007841121,0.009162564],"study_design_scores_gemma":[0.00005217756,0.00068459334,0.3053027,0.000016798727,0.00023510703,0.022170562,0.00051253405,0.0028753998,0.65859884,0.0012215216,0.008309727,0.00001990871],"about_ca_topic_score_codex":0.0003273049,"about_ca_topic_score_gemma":0.00030903702,"teacher_disagreement_score":0.001976695,"about_ca_system_score_codex":0.00012703128,"about_ca_system_score_gemma":0.00020243843,"threshold_uncertainty_score":0.006612718},"labels":[],"label_agreement":null},{"id":"W4399420632","doi":"10.1016/j.modpat.2024.100533","title":"Computer-Based Evaluation of α-Synuclein Pathology in Multiple System Atrophy as a Novel Tool to Recognize Disease Subtypes","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Parkinson's Disease Mechanisms and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Brain Institute; Toronto Rehabilitation Institute; University Health Network; Occupational Cancer Research Centre","funders":"Krembil Foundation; National Institutes of Health; Edmond J. Safra Philanthropic Foundation; Multiple System Atrophy Coalition","keywords":"Pathology; Atrophy; Disease; Medicine; Alpha-synuclein; Parkinson's disease","score_opus":0.03856001243262441,"score_gpt":0.3046854453486896,"score_spread":0.26612543291606516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399420632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9616698,0.00067352434,0.033779647,0.0000591466,0.000026595264,0.00013195671,0.0005274201,0.0007106454,0.0024212804],"genre_scores_gemma":[0.9380924,0.00032355153,0.059762746,0.000027382435,0.000024096198,0.00016443538,0.0004989343,0.00004664052,0.0010597593],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996643,0.00007416598,0.000036422924,0.00008043036,0.00011211339,0.000032498814],"domain_scores_gemma":[0.99900997,0.0003434635,0.00019057302,0.00008065283,0.00027020715,0.00010516685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010458162,0.00041098584,0.0003658998,0.00385747,0.00020988329,0.000932856,0.00039103103,0.00047503557,0.0015239437],"category_scores_gemma":[0.0018588816,0.0002821718,0.00026794404,0.0011581084,0.00027538202,0.0006246149,0.0006352427,0.00033011308,0.00034962685],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002362054,0.00044359468,0.5402982,0.00045981217,0.00038449717,0.000869063,0.00094916386,0.006262197,0.2608197,0.0017797052,0.0014990808,0.18387282],"study_design_scores_gemma":[0.00007086143,0.0004874429,0.8451325,0.000058902824,0.0002162501,0.0036738527,0.0005406678,0.11653872,0.029713793,0.0010042414,0.0024691958,0.00009348822],"about_ca_topic_score_codex":0.0013228517,"about_ca_topic_score_gemma":0.0024141795,"teacher_disagreement_score":0.00385747,"about_ca_system_score_codex":0.00023904968,"about_ca_system_score_gemma":0.00023074333,"threshold_uncertainty_score":0.005530894},"labels":[],"label_agreement":null},{"id":"W4400721614","doi":"10.1016/j.modpat.2024.100565","title":"Neuronal Distribution in Colorectal Cancer: Associations With Clinicopathological Parameters and Survival","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer, Stress, Anesthesia, and Immune Response","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Colorectal cancer; Pathology; Medicine; Distribution (mathematics); Oncology; Biology; Internal medicine; Cancer; Mathematics","score_opus":0.0245513722941786,"score_gpt":0.30246122560904326,"score_spread":0.2779098533148647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400721614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976804,0.0013465987,0.0001889954,0.000035153844,0.0000063362218,0.0000041391913,0.0002720872,0.000005295222,0.00046102158],"genre_scores_gemma":[0.99927443,0.00024691457,0.000060494764,0.0000055086543,0.000004236129,0.0000026463779,0.00027812493,0.0000014306066,0.00012619993],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99985063,0.000028101022,0.000018540972,0.000047885587,0.000025415333,0.000029370749],"domain_scores_gemma":[0.99954814,0.00007511055,0.00016786918,0.000062336556,0.00006660203,0.00007991237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003039562,0.0001305031,0.00017656088,0.0004593729,0.00021430092,0.0003558865,0.00019039733,0.0002543382,0.0010170756],"category_scores_gemma":[0.0008754631,0.00013192117,0.00026786997,0.000569966,0.00020881358,0.00020955456,0.0002721009,0.00025928355,0.00013310538],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017759191,0.0000057018215,0.99767894,0.000011736893,0.000043212985,0.00006482194,0.000015966787,0.000037543592,0.00046250917,0.000009656438,0.00004853269,0.0014438946],"study_design_scores_gemma":[0.000002982644,0.000024322455,0.99926764,0.0000031814943,0.000027851282,0.00022801652,0.000047620015,0.00014106274,0.00006544712,0.000020134315,0.00016998874,0.00000170111],"about_ca_topic_score_codex":0.003962221,"about_ca_topic_score_gemma":0.007908171,"teacher_disagreement_score":0.003962221,"about_ca_system_score_codex":0.00021862194,"about_ca_system_score_gemma":0.00015040985,"threshold_uncertainty_score":0.0078783035},"labels":[],"label_agreement":null},{"id":"W4400748060","doi":"10.1016/j.modpat.2024.100563","title":"Evaluation of Artificial Intelligence-Based Gleason Grading Algorithms “in the Wild”","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Radboud Universitair Medisch Centrum; Health~Holland","keywords":"Grading (engineering); Computer science; Pathology; Algorithm; Artificial intelligence; Medical physics; Medicine; Biology","score_opus":0.09863510812397899,"score_gpt":0.341038808473111,"score_spread":0.24240370034913203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400748060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87613535,0.015837384,0.057792593,0.0032011315,0.002122155,0.0009519799,0.0067589264,0.011685145,0.025515342],"genre_scores_gemma":[0.8945343,0.0011098126,0.07925315,0.0009540364,0.00036070324,0.00024453324,0.018937437,0.0005033245,0.0041026063],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9907782,0.003086756,0.00077424105,0.0018372498,0.002850487,0.0006730547],"domain_scores_gemma":[0.98438686,0.0073059946,0.0009560627,0.002313779,0.004327408,0.0007099345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011778669,0.0021533126,0.0012838201,0.003127348,0.0011509587,0.0025997842,0.0031210913,0.0029337283,0.002338521],"category_scores_gemma":[0.026761767,0.0004211208,0.0013260999,0.001885497,0.0012480137,0.0019509965,0.0016962361,0.0017255454,0.0014830997],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004557888,0.0032000162,0.05355608,0.0026590768,0.0020620099,0.0005590817,0.0005068799,0.25004762,0.013825228,0.0051620724,0.064664334,0.5991997],"study_design_scores_gemma":[0.000549964,0.0020051477,0.026734589,0.00027169092,0.0003618271,0.0005348536,0.0004675512,0.9238144,0.021461096,0.0053203073,0.018348278,0.00013022526],"about_ca_topic_score_codex":0.01622565,"about_ca_topic_score_gemma":0.016608818,"teacher_disagreement_score":0.01622565,"about_ca_system_score_codex":0.002943196,"about_ca_system_score_gemma":0.0022497922,"threshold_uncertainty_score":0.062292278},"labels":[],"label_agreement":null},{"id":"W4401800480","doi":"10.1016/j.modpat.2024.100599","title":"Acral Fibrochondromyxoid Tumor: A Clinicopathologic and Molecular Genetic Study of 37 Cases","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Pathology; Medicine; Biology","score_opus":0.02594655547806071,"score_gpt":0.31488303624510167,"score_spread":0.288936480767041,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401800480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979304,0.00056403363,0.0002808149,0.000036455367,0.0000064923024,0.000033706638,0.000104888524,0.000010079477,0.001033068],"genre_scores_gemma":[0.9988387,0.0003118001,0.00033553573,0.000020934096,0.000015876278,0.000024290624,0.00013158843,0.0000059096965,0.00031542225],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993074,0.00006483587,0.00009536766,0.00015814994,0.00015981788,0.00021432486],"domain_scores_gemma":[0.9991123,0.00026460722,0.00020249923,0.00011862917,0.00009555514,0.0002064097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005137096,0.0009896302,0.00061609695,0.0034015197,0.0016234145,0.00087533676,0.0008806889,0.0006486607,0.0029228397],"category_scores_gemma":[0.0022208653,0.0008700523,0.00059430883,0.0017059889,0.0017687248,0.00053893664,0.0011848339,0.0003228921,0.00070513034],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042021787,0.00017019807,0.5380298,0.000105494306,0.00006856245,0.4382406,0.0025668403,0.00021228328,0.012550118,0.00029963246,0.00030181694,0.0070345136],"study_design_scores_gemma":[0.000052777534,0.0003081709,0.48156488,0.00003730106,0.00017354108,0.5076419,0.0028110906,0.00056025566,0.0036313778,0.0002632982,0.002910078,0.000045354813],"about_ca_topic_score_codex":0.004481712,"about_ca_topic_score_gemma":0.0041222395,"teacher_disagreement_score":0.004481712,"about_ca_system_score_codex":0.0007542173,"about_ca_system_score_gemma":0.00073395745,"threshold_uncertainty_score":0.009777844},"labels":[],"label_agreement":null},{"id":"W4402405084","doi":"10.1016/j.modpat.2024.100613","title":"p53 Abnormal Oral Epithelial Dysplasias are Associated With High Risks of Progression and Local Recurrence—A Retrospective Study in a Longitudinal Cohort","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Oral Health Pathology and Treatment","field":"Dentistry","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of British Columbia","funders":"BC Cancer Foundation; University of British Columbia","keywords":"Medicine; Retrospective cohort study; Cohort; Pathology; Cohort study","score_opus":0.04715398109831524,"score_gpt":0.36394299748773645,"score_spread":0.3167890163894212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402405084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999303,0.0001729272,0.0001107883,0.000023447365,0.000007539332,0.000005706252,0.00021133039,0.0000041213675,0.00016115836],"genre_scores_gemma":[0.9989286,0.000139612,0.00009493032,0.000029571665,0.000013236472,0.0000100196,0.0003934865,0.000006276555,0.00038410426],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993679,0.0001221578,0.000056269302,0.000249899,0.000072361894,0.0001315512],"domain_scores_gemma":[0.9985688,0.00012567823,0.00042832163,0.00030753855,0.00022450252,0.0003451703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007863217,0.0004974062,0.000543013,0.0010678438,0.0015907139,0.0013031816,0.0005899396,0.0007026859,0.001852442],"category_scores_gemma":[0.0014727097,0.0011839771,0.0010689216,0.0014190403,0.00057858176,0.00090180885,0.0008344157,0.0013582789,0.00052013365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018858376,0.00007590592,0.9981645,0.000004407086,0.00008871425,0.00017611179,0.00021127288,0.000012511399,0.00047775617,0.000014270558,0.000075826116,0.00051020033],"study_design_scores_gemma":[0.0000123030995,0.00019483492,0.99777955,0.000005885857,0.000099177414,0.0008006773,0.0006497629,0.00009387566,0.00008591574,0.000025438581,0.0002434278,0.000009049737],"about_ca_topic_score_codex":0.0105127,"about_ca_topic_score_gemma":0.010775054,"teacher_disagreement_score":0.0105127,"about_ca_system_score_codex":0.00037242638,"about_ca_system_score_gemma":0.0007019302,"threshold_uncertainty_score":0.02090305},"labels":[],"label_agreement":null},{"id":"W4402405482","doi":"10.1016/j.modpat.2024.100614","title":"Abnormal p53 Immunohistochemical Patterns Are Associated with Regional Lymph Node Metastasis in Oral Cavity Squamous Cell Carcinoma at Time of Surgery","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Head and Neck Cancer Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Basal cell; Immunohistochemistry; Pathology; Medicine; Lymph node metastasis; Oral cavity; Lymph node; Carcinoma; Metastasis; Cancer; Internal medicine; Dentistry","score_opus":0.032247798415392076,"score_gpt":0.2666060479833846,"score_spread":0.23435824956799253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402405482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992988,0.00019044004,0.00005043301,0.000013645766,0.000004682031,0.0000016195639,0.000024852978,0.0000015837571,0.00041394858],"genre_scores_gemma":[0.99956983,0.00012345215,0.00003957212,0.0000057035045,0.000008018186,0.0000017409975,0.000033753768,9.3574664e-7,0.00021711909],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999877,0.00002011158,0.00001627153,0.000017371078,0.000026421554,0.00004279094],"domain_scores_gemma":[0.9994168,0.00013339394,0.00024987408,0.000028067354,0.000060367827,0.00011146194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024394933,0.00018286826,0.00015663277,0.0012211918,0.0003182886,0.00039278885,0.0002051338,0.00029684982,0.0018864062],"category_scores_gemma":[0.0010956147,0.00018225482,0.00021466738,0.000767148,0.00040434365,0.0003746172,0.00024835413,0.00028564566,0.00029008923],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019646005,0.000027849348,0.99208355,0.000012754337,0.000015449185,0.0016153884,0.0001230483,0.000029123725,0.0041438146,0.000025363723,0.000038265334,0.0016889656],"study_design_scores_gemma":[0.0000027585102,0.00008294881,0.99516195,0.000004198186,0.000035994934,0.003197968,0.0004596943,0.00010055106,0.000709171,0.00004551414,0.00019540965,0.000003844116],"about_ca_topic_score_codex":0.0016038816,"about_ca_topic_score_gemma":0.002222929,"teacher_disagreement_score":0.0018864062,"about_ca_system_score_codex":0.00018293069,"about_ca_system_score_gemma":0.00026137367,"threshold_uncertainty_score":0.0063106418},"labels":[],"label_agreement":null},{"id":"W4402738236","doi":"10.1016/j.modpat.2024.100615","title":"Contemporary Approach to the Diagnosis and Classification of Myelodysplastic Neoplasms/Syndromes—Recommendations From the International Consortium for Myelodysplastic Neoplasms/Syndromes (MDS [icMDS])","year":2024,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research; Sunnybrook Health Science Centre","funders":"National Cancer Institute; Foundation Medicine; National Institutes of Health; Agence Nationale de la Recherche; Edward P. Evans Foundation; Merck","keywords":"Myelodysplastic syndromes; Medicine; Pathology; Hematopathology; Biology; Cytogenetics; Bone marrow","score_opus":0.15036843319584542,"score_gpt":0.37671255483940436,"score_spread":0.22634412164355894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402738236","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000082397855,0.9936559,0.0005213934,0.0033053036,0.0010346174,0.00003217414,0.0001547955,0.000024861418,0.0011884582],"genre_scores_gemma":[0.0005462802,0.99413186,0.0017755183,0.002018637,0.00068678963,0.00003888404,0.00033297128,0.00000496583,0.00046412382],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99855274,0.00026494547,0.0004645572,0.00018117507,0.00045585085,0.000080710306],"domain_scores_gemma":[0.99623543,0.001319689,0.0005633936,0.00008263382,0.0016031899,0.0001957089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043905103,0.001155449,0.0024920448,0.0086609395,0.000573948,0.0024793656,0.002940041,0.0018218013,0.0032883128],"category_scores_gemma":[0.0060265344,0.00055416656,0.001711801,0.0062305564,0.0013350403,0.0026750304,0.0016177271,0.003421865,0.0027375186],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008174477,0.00005296445,0.0007659379,0.020579968,0.00020174321,0.00018159511,0.000094776326,0.00039862384,0.00062742876,0.005235437,0.117988236,0.8537916],"study_design_scores_gemma":[0.000045961475,0.00006494917,0.0025180776,0.02763436,0.00048938364,0.0011410903,0.00014648837,0.00016932286,0.0002231575,0.0035447485,0.9639818,0.000040637835],"about_ca_topic_score_codex":0.009106969,"about_ca_topic_score_gemma":0.012553276,"teacher_disagreement_score":0.009106969,"about_ca_system_score_codex":0.0026097777,"about_ca_system_score_gemma":0.007843208,"threshold_uncertainty_score":0.023219526},"labels":[],"label_agreement":null},{"id":"W4402787863","doi":"10.1016/j.modpat.2024.100624","title":"Spatial Cancer-Immune Phenotypes Predict Shorter Recurrence-Free Survival in the No Specific Molecular Profile Molecular Subtype of Endometrial Carcinoma","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"Associazione Italiana per la Ricerca sul Cancro; Fondazione AIRC per la ricerca sul cancro ETS","keywords":"Pathology; Endometrial cancer; Phenotype; Carcinoma; Immune system; Cancer; Medicine; Hematopathology; Oncology; Biology; Internal medicine; Immunology; Gene; Genetics; Cytogenetics","score_opus":0.026203617434232284,"score_gpt":0.2812884675126138,"score_spread":0.25508485007838155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402787863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986858,0.00034374732,0.00018438493,0.000043849588,0.0000068014315,0.0000042613365,0.00010868941,0.0000030843992,0.0006194053],"genre_scores_gemma":[0.99958056,0.000088802924,0.00006466541,0.000010319523,0.000005996864,0.0000022521722,0.000085916145,0.0000013785134,0.00016013179],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99987113,0.00003127053,0.000012789709,0.000028696164,0.00001972249,0.00003641924],"domain_scores_gemma":[0.99952626,0.00008181797,0.00020890382,0.000046307065,0.000051502935,0.00008525357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023719842,0.00021343204,0.0002623311,0.0005224347,0.0002855204,0.0005863402,0.00024825448,0.00029525958,0.0018803457],"category_scores_gemma":[0.0013507766,0.00015009394,0.00032044825,0.00045820433,0.0002630301,0.0002721035,0.00034614748,0.00031713274,0.00022640587],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003244877,0.00002480474,0.9915268,0.000022141467,0.000050783154,0.00017449194,0.00006599406,0.00016465405,0.003448142,0.00007862036,0.00008305265,0.0040361085],"study_design_scores_gemma":[0.000004523255,0.00005962148,0.99780864,0.000006875357,0.000042022468,0.0005071077,0.00028333385,0.00047224897,0.00031767282,0.0001874529,0.00030653315,0.0000039782517],"about_ca_topic_score_codex":0.0018157407,"about_ca_topic_score_gemma":0.0028232639,"teacher_disagreement_score":0.0018803457,"about_ca_system_score_codex":0.00021208789,"about_ca_system_score_gemma":0.00027153257,"threshold_uncertainty_score":0.006290376},"labels":[],"label_agreement":null},{"id":"W4403242390","doi":"10.1016/j.modpat.2024.100628","title":"Validation of Metallothionein Immunohistochemistry as a Highly Sensitive Screening Test for Wilson Disease","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Trace Elements in Health","field":"Nursing","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"Mayo Clinic; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine","keywords":"Metallothionein; Immunohistochemistry; Pathology; Disease; Medicine; Biology; Biochemistry","score_opus":0.021384343329553544,"score_gpt":0.32982477103003377,"score_spread":0.30844042770048025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403242390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9710929,0.0025210986,0.017256232,0.0003915288,0.00019761683,0.00013828123,0.00022591419,0.00023941025,0.007937083],"genre_scores_gemma":[0.9908976,0.00032414388,0.0072994265,0.00014577922,0.000040138635,0.000042944524,0.00015309924,0.000026227586,0.001070551],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99788517,0.00072257256,0.00020205986,0.00037976372,0.00063492404,0.00017547983],"domain_scores_gemma":[0.9957111,0.0021367446,0.0003395212,0.0003906017,0.0012181051,0.00020399276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0044038575,0.0006754607,0.00033235704,0.0015218187,0.00046046783,0.00083927356,0.0005726025,0.0008236274,0.0013905592],"category_scores_gemma":[0.005810173,0.0004451155,0.00047117483,0.000389795,0.0010695527,0.0005408891,0.0005039645,0.0005405673,0.0006993395],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014285522,0.0002840457,0.44550577,0.00030734847,0.00019538093,0.0026131656,0.0010897972,0.00062949816,0.51506937,0.00090629933,0.000923678,0.031047136],"study_design_scores_gemma":[0.00016660681,0.0033302365,0.5391818,0.00024689175,0.00089684693,0.016930507,0.0012822112,0.018211247,0.40135744,0.0018278462,0.016485406,0.00008298025],"about_ca_topic_score_codex":0.001011403,"about_ca_topic_score_gemma":0.001442642,"teacher_disagreement_score":0.0044038575,"about_ca_system_score_codex":0.00027561185,"about_ca_system_score_gemma":0.00043552864,"threshold_uncertainty_score":0.023290098},"labels":[],"label_agreement":null},{"id":"W4403997333","doi":"10.1016/j.modpat.2024.100647","title":"Proximal and Classic Epithelioid Sarcomas are Distinct Molecular Entities Defined by MYC/GATA3 and SOX17/Endothelial Markers, Respectively","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; Arthritis Society","funders":"Alleanza Contro il Cancro; Associazione Italiana per la Ricerca sul Cancro; Ministero della Salute","keywords":"Pathology; GATA3; Biology; Medicine; Gene; Genetics; Transcription factor","score_opus":0.011832739036303625,"score_gpt":0.24944713831649032,"score_spread":0.23761439928018668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403997333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99072534,0.001207902,0.004951517,0.000025697685,0.0000056182703,0.00006271786,0.0005531405,0.000077322606,0.0023907088],"genre_scores_gemma":[0.99324244,0.00067851774,0.003978332,0.000036293975,0.0000072409634,0.000024296058,0.0005742284,0.000012262478,0.0014463937],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983037,0.000020747915,0.000020981957,0.000048649217,0.0000513722,0.000027854825],"domain_scores_gemma":[0.99976796,0.000028163837,0.00009277707,0.000024464733,0.00002710314,0.00005966522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019815436,0.00032118967,0.00023848054,0.0008678929,0.0001449052,0.00032707627,0.0001465183,0.00018338703,0.0019926492],"category_scores_gemma":[0.0002625613,0.00015188305,0.00020364064,0.00053276937,0.00059786846,0.00023803984,0.0004441809,0.00024547853,0.000572846],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015694983,0.000082137936,0.16629028,0.0003197756,0.00011679923,0.0070583965,0.0006221767,0.0005802685,0.7629466,0.0019096815,0.00028460316,0.0582197],"study_design_scores_gemma":[0.00007908098,0.0007359978,0.77204233,0.000056443958,0.00015331796,0.06143045,0.0007987927,0.0015775088,0.14830194,0.0026063705,0.012181357,0.00003653211],"about_ca_topic_score_codex":0.000332958,"about_ca_topic_score_gemma":0.00089497457,"teacher_disagreement_score":0.0019926492,"about_ca_system_score_codex":0.00017997703,"about_ca_system_score_gemma":0.0001980429,"threshold_uncertainty_score":0.0066660643},"labels":[],"label_agreement":null},{"id":"W4403997357","doi":"10.1016/j.modpat.2024.100646","title":"Refining Diagnostic Subtypes of Peripheral T-Cell Lymphoma Using a Multiparameter Approach","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Spinal Cord Injury BC","funders":"National Cancer Institute; National Cancer Center; Leukemia and Lymphoma Society","keywords":"Pathology; Lymphoma; Peripheral; Medicine; Internal medicine","score_opus":0.03028611225024352,"score_gpt":0.28041942240977585,"score_spread":0.25013331015953233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403997357","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8940394,0.0041932636,0.09176162,0.000686123,0.0001308606,0.00049438205,0.0008294745,0.00071836903,0.00714662],"genre_scores_gemma":[0.95147395,0.0005452223,0.04633495,0.00012775182,0.000121615994,0.00013346819,0.0006055268,0.000115889074,0.0005415518],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99752194,0.0007358306,0.0004051057,0.0005213045,0.00052467664,0.00029108173],"domain_scores_gemma":[0.9957534,0.001285839,0.0006540203,0.00058765773,0.0014945838,0.00022445979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0057416414,0.0011627504,0.0011909407,0.008099574,0.0009793582,0.0039189444,0.0015448065,0.00105898,0.001760645],"category_scores_gemma":[0.010144221,0.00054543983,0.0011756731,0.002052624,0.0006160464,0.0025461318,0.002221286,0.0013349977,0.00078278285],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087240315,0.00013041613,0.791103,0.00025744078,0.0004838048,0.0013056254,0.0007105081,0.007991574,0.041667286,0.0011334959,0.0017377294,0.1526067],"study_design_scores_gemma":[0.0001754185,0.0007478261,0.62114006,0.00058323576,0.00273759,0.016943485,0.0050438833,0.26680872,0.04822573,0.0169254,0.020445755,0.00022290106],"about_ca_topic_score_codex":0.0019979312,"about_ca_topic_score_gemma":0.0027900443,"teacher_disagreement_score":0.008099574,"about_ca_system_score_codex":0.0009248745,"about_ca_system_score_gemma":0.00064091594,"threshold_uncertainty_score":0.03036505},"labels":[],"label_agreement":null},{"id":"W4404565417","doi":"10.1016/j.modpat.2024.100660","title":"Retinoblastoma Protein Loss in p53 Abnormal Endometrial Carcinoma: Histologic and Clinicopathological Correlates","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Leids Universitair Medisch Centrum; KWF Kankerbestrijding; Universiteit Leiden","keywords":"Pathology; Carcinoma; Hematopathology; Medicine; Biology; Cytogenetics","score_opus":0.028684984376678525,"score_gpt":0.29458111067685094,"score_spread":0.2658961263001724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404565417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99936146,0.00034807663,0.00004830628,0.000007892682,0.0000010181441,0.0000051217257,0.00007554993,0.0000013823392,0.00015110915],"genre_scores_gemma":[0.99964404,0.00011035994,0.000038733182,0.0000046629466,0.000003079804,0.0000049295827,0.00012124194,7.01473e-7,0.000072369396],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99964094,0.00008169216,0.000057083642,0.0000756397,0.0000902346,0.000054454533],"domain_scores_gemma":[0.9991217,0.00021205188,0.00034213695,0.00012008614,0.00009407493,0.00010986627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074838556,0.00013645753,0.0002469405,0.0010826617,0.00020932811,0.00039513328,0.00025590978,0.00022801265,0.00066371314],"category_scores_gemma":[0.0017518547,0.00018498306,0.00012521794,0.0006478519,0.0003981863,0.0002519178,0.0003136864,0.0001914689,0.00015225005],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030835616,0.000014092829,0.99617094,0.000007829543,0.00001807082,0.0002329051,0.000022294427,0.000030131809,0.0015414037,0.0000063737625,0.000021709648,0.001625849],"study_design_scores_gemma":[0.0000103439215,0.00007448945,0.9977531,0.0000022357333,0.000017899492,0.0014446178,0.000050674204,0.0001500262,0.0003324397,0.000014619606,0.00014775872,0.000001913568],"about_ca_topic_score_codex":0.0018305532,"about_ca_topic_score_gemma":0.0024098882,"teacher_disagreement_score":0.0018305532,"about_ca_system_score_codex":0.00024828926,"about_ca_system_score_gemma":0.00017895986,"threshold_uncertainty_score":0.0039578676},"labels":[],"label_agreement":null},{"id":"W4404803877","doi":"10.1016/j.modpat.2024.100674","title":"Analysis of ASCL1/NEUROD1/POU2F3/YAP1 Yields Novel Insights for the Diagnosis of Olfactory Neuroblastoma and Identifies Sinonasal Tuft Cell–Like Carcinoma","year":2024,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Head and Neck Surgical Oncology","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Cancer Institute; National Institutes of Health; Memorial Sloan-Kettering Cancer Center","keywords":"Tuft; Pathology; YAP1; Biology; Neuroblastoma; Anatomy; Medicine; Transcription factor","score_opus":0.04384862498184733,"score_gpt":0.28809175861132597,"score_spread":0.24424313362947864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404803877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909589,0.00043325918,0.004792361,0.00022489927,0.000018141174,0.0000342097,0.0005884791,0.00012214764,0.002827462],"genre_scores_gemma":[0.99421495,0.00020748482,0.0037428692,0.000058073718,0.0000073411325,0.000015972239,0.00071145844,0.000025159703,0.0010167165],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99986815,0.0000069882594,0.000008643193,0.000025996022,0.000044773446,0.00004527008],"domain_scores_gemma":[0.99986744,0.000017661603,0.000026378173,0.000018234932,0.000029585291,0.0000408008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025058447,0.00035769402,0.0001900665,0.0010717681,0.00036918573,0.00058106007,0.00028195098,0.0004330274,0.0020197164],"category_scores_gemma":[0.00031002116,0.00016112936,0.000239945,0.00039901142,0.0005351948,0.00034219457,0.00035175352,0.00049062,0.00077850174],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028960002,0.000030708703,0.03419309,0.000038906535,0.00002011137,0.0035776948,0.00007974809,0.0002527635,0.954742,0.0004226913,0.00032580437,0.0060268533],"study_design_scores_gemma":[0.000034911307,0.0001823154,0.14910333,0.000015938824,0.000080501144,0.018735394,0.0006291006,0.012089069,0.8092529,0.0011872046,0.008667802,0.000021567737],"about_ca_topic_score_codex":0.0019888452,"about_ca_topic_score_gemma":0.003873115,"teacher_disagreement_score":0.0020197164,"about_ca_system_score_codex":0.0005681092,"about_ca_system_score_gemma":0.0003011663,"threshold_uncertainty_score":0.0067566037},"labels":[],"label_agreement":null},{"id":"W4406456100","doi":"10.1016/j.modpat.2025.100712","title":"Claudin 18.2 Expression in 1404 Digestive Tract Adenocarcinomas Including 1175 Colorectal Carcinomas: Distinct Colorectal Carcinoma Subtypes Are Claudin 18.2 Positive","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute","funders":"National Cancer Institute; National Institutes of Health","keywords":"Claudin; Pathology; Adenocarcinoma; Medicine; Carcinoma; Biology; Cancer research; Internal medicine; Tight junction; Cancer","score_opus":0.03536162683172027,"score_gpt":0.2839303192566211,"score_spread":0.24856869242490082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406456100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988808,0.00033172124,0.000067075416,0.000008175309,0.0000014428214,0.0000024326273,0.00016221088,0.0000035478463,0.0005425146],"genre_scores_gemma":[0.9990914,0.00013389107,0.0000649536,0.0000059635054,0.000001613041,0.0000028340576,0.0003760221,0.000002474664,0.00032078175],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998834,0.000008976903,0.000012084883,0.00002536391,0.000029100536,0.000041157327],"domain_scores_gemma":[0.9998653,0.00002421338,0.000030580657,0.000011318221,0.000032608026,0.00003590939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011671761,0.00011203937,0.00018706595,0.00063343474,0.00024855832,0.00036144204,0.00011299082,0.0001685616,0.0012435309],"category_scores_gemma":[0.00029309216,0.00013006109,0.00015671673,0.0007063083,0.00019723579,0.00013552207,0.00019972894,0.00011726369,0.00024398074],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013258253,0.00005329951,0.8205131,0.00012269946,0.00013102422,0.001630172,0.00077987136,0.00011279967,0.15852879,0.00016501981,0.00041500575,0.016222328],"study_design_scores_gemma":[0.0000125622355,0.00011097998,0.98976874,0.0000074012373,0.00007675052,0.0022343942,0.00062409963,0.00015940565,0.005571504,0.00006233759,0.001365193,0.0000067260235],"about_ca_topic_score_codex":0.0040925955,"about_ca_topic_score_gemma":0.004617216,"teacher_disagreement_score":0.0040925955,"about_ca_system_score_codex":0.0002230456,"about_ca_system_score_gemma":0.00015298277,"threshold_uncertainty_score":0.008137584},"labels":[],"label_agreement":null},{"id":"W4406756255","doi":"10.1016/j.modpat.2025.100718","title":"Digital Profiling of Immune Biomarkers in Breast Cancer: Relation to Anthracycline Benefit","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; BC Cancer Agency; Queen's University; University of British Columbia","funders":"British Columbia Knowledge Development Fund; Sichuan Province Science and Technology Support Program; BC Cancer Foundation; University of British Columbia; Canada Foundation for Innovation; National Natural Science Foundation of China; Cancer Research Society; Eli Lilly Canada; Canadian Cancer Society; AstraZeneca","keywords":"Profiling (computer programming); Anthracycline; Breast cancer; Medicine; Pathology; Immune system; Oncology; Internal medicine; Cancer; Immunology; Computer science","score_opus":0.010347739563760406,"score_gpt":0.28911128029166605,"score_spread":0.27876354072790566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406756255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971192,0.0006989147,0.001328518,0.000058901933,0.0000061952956,0.000030882824,0.00016757053,0.000015937616,0.0005740623],"genre_scores_gemma":[0.99848,0.00009813372,0.0010742996,0.000020367053,0.000006248383,0.000025320076,0.00015105306,0.0000013128887,0.0001433364],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994764,0.00026027046,0.000031396812,0.00006986817,0.00012163328,0.000040451017],"domain_scores_gemma":[0.9989473,0.0005378603,0.00031412934,0.00007977771,0.00006600635,0.00005490519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010479924,0.00012987321,0.00024735476,0.00038145698,0.00007907045,0.00024623005,0.00014046699,0.00017720227,0.00089967396],"category_scores_gemma":[0.0025345013,0.000066186825,0.00010844179,0.00040624806,0.00018090954,0.00014192142,0.00021788008,0.00022409734,0.000093033996],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.025039503,0.00079776713,0.6216387,0.00033632843,0.00048815244,0.00008365516,0.00013363647,0.00967685,0.17008068,0.0004168645,0.00052404735,0.17078373],"study_design_scores_gemma":[0.00024732726,0.007929507,0.92484534,0.000013991706,0.00029202423,0.0002868182,0.00009166062,0.012771934,0.05148581,0.00044677086,0.0015700799,0.000018789118],"about_ca_topic_score_codex":0.00016709161,"about_ca_topic_score_gemma":0.00031822792,"teacher_disagreement_score":0.0010479924,"about_ca_system_score_codex":0.00016175822,"about_ca_system_score_gemma":0.000086012544,"threshold_uncertainty_score":0.0055423975},"labels":[],"label_agreement":null},{"id":"W4407870792","doi":"10.1016/j.modpat.2025.100742","title":"Cervical Human Papillomavirus–Independent Squamous Cell Carcinoma: A Clinicopathological Review and Outcomes Analysis Compared With Human Papillomavirus–Associated Squamous Cell Carcinoma","year":2025,"lang":"en","type":"review","venue":"Modern Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"Agencia Estatal de Investigación; Ministerio de Ciencia e Innovación; Generalitat de Catalunya","keywords":"Human papillomavirus; Koilocyte; Basal cell; Pathology; Medicine; Squamous carcinoma; Cell; Oncology; Carcinoma; Cervical cancer; Biology; Internal medicine; Cancer; Cervical intraepithelial neoplasia","score_opus":0.07033479743238474,"score_gpt":0.3829778842028178,"score_spread":0.31264308677043307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407870792","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007623891,0.99884665,0.000021446263,0.000057125333,0.000043249413,0.000006361979,0.00013411343,0.0000012040749,0.00012742248],"genre_scores_gemma":[0.0061884033,0.9932776,0.00009996597,0.000118845055,0.00005171226,0.000012046133,0.00019221609,0.0000012686135,0.00005793128],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.999062,0.00012105978,0.00040469278,0.0001580324,0.00019890178,0.000055321274],"domain_scores_gemma":[0.99807334,0.0009803829,0.0005681025,0.000031760694,0.00029247845,0.000053887416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014646085,0.0006656138,0.0025431484,0.006051433,0.00020083826,0.0010158975,0.00080507644,0.0004892722,0.0017144629],"category_scores_gemma":[0.003342181,0.0003262883,0.0024732007,0.008611008,0.000397218,0.00096365664,0.00077006564,0.0005634908,0.00022261728],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076012546,0.000055790853,0.027279796,0.3528172,0.011459981,0.00044346525,0.00031369712,0.00028959473,0.0011059127,0.00079101475,0.012401351,0.59228206],"study_design_scores_gemma":[0.0003801415,0.0007173089,0.1437811,0.34344202,0.1271693,0.008225454,0.0013328533,0.000252295,0.0010174467,0.0009768159,0.37253183,0.00017340807],"about_ca_topic_score_codex":0.0038396243,"about_ca_topic_score_gemma":0.00914538,"teacher_disagreement_score":0.006051433,"about_ca_system_score_codex":0.0010247803,"about_ca_system_score_gemma":0.0022335704,"threshold_uncertainty_score":0.007745683},"labels":[],"label_agreement":null},{"id":"W4407920409","doi":"10.1016/j.modpat.2025.100730","title":"Consistent Patterns of Immune-Related Adverse Events in Postmortem and Real-World Data on Immune Checkpoint Inhibitors","year":2025,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immune system; Medicine; Pathology; Immunology","score_opus":0.02855300140879461,"score_gpt":0.2933299929755666,"score_spread":0.264776991566772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407920409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5087954,0.011875647,0.0070268945,0.43510714,0.005760383,0.000084903804,0.0033773575,0.00025621886,0.02771605],"genre_scores_gemma":[0.91458106,0.0035169593,0.0023859157,0.06757387,0.008693342,0.00003699934,0.0006790579,0.000058092897,0.002474634],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985482,0.00051388814,0.00030175317,0.00020735573,0.00031193483,0.00011674577],"domain_scores_gemma":[0.9846235,0.008253279,0.0027537192,0.0013346464,0.0023234996,0.0007114177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020294257,0.00017482467,0.00040756125,0.0008703546,0.000557407,0.0010404696,0.00058085856,0.0024458522,0.0009912315],"category_scores_gemma":[0.01979953,0.00018151777,0.00026783958,0.001470794,0.0006880744,0.0006502325,0.00033026197,0.0019537506,0.00046882566],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018924247,0.00013978717,0.72316974,0.00030882802,0.00029955656,0.06492348,0.0009911786,0.000728543,0.004264785,0.0024779027,0.14937942,0.051424365],"study_design_scores_gemma":[0.00018247066,0.0006007917,0.6604039,0.0005190046,0.00029418606,0.18963565,0.003103913,0.0034899062,0.004131513,0.014888115,0.12259901,0.00015153224],"about_ca_topic_score_codex":0.001755785,"about_ca_topic_score_gemma":0.003771101,"teacher_disagreement_score":0.0024458522,"about_ca_system_score_codex":0.00082131935,"about_ca_system_score_gemma":0.00046028508,"threshold_uncertainty_score":0.01073271},"labels":[],"label_agreement":null},{"id":"W4407964493","doi":"10.1016/j.modpat.2025.100744","title":"Clinicopathological Predictors of the Presence of Blood Circulating Tumor DNA in Early-Stage Non–Small Cell Lung Cancers","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Fonds de Recherche du Québec - Santé; Fondation Institut Universitaire de Cardiologie et de Pneumologie de Québec; AstraZeneca","keywords":"Stage (stratigraphy); Pathology; Medicine; Lung; Lung cancer; Circulating tumor DNA; Oncology; Internal medicine; Biology; Cancer","score_opus":0.009314369191559051,"score_gpt":0.24280702422578776,"score_spread":0.2334926550342287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407964493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99800354,0.0006822844,0.00025475817,0.000078673176,0.00001996437,0.0000059349027,0.00021221834,0.000010454652,0.00073214876],"genre_scores_gemma":[0.9994537,0.00009990333,0.00009185717,0.000011931171,0.000020945168,0.0000036051613,0.00012568288,0.0000021021904,0.00019010842],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973685,0.0000783588,0.000035557616,0.00004315054,0.000049843096,0.00005624881],"domain_scores_gemma":[0.9967147,0.0013817222,0.0008160449,0.00013626784,0.00030949403,0.0006417322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000601409,0.0002706125,0.00034521584,0.0008595007,0.00037816586,0.0007234625,0.00035029964,0.0006056244,0.002529489],"category_scores_gemma":[0.003499773,0.00028750408,0.00030117462,0.0009747866,0.00046577593,0.0005748582,0.00028169842,0.00085796893,0.00032428466],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035244023,0.000025434569,0.99676067,0.000010192469,0.000026969043,0.0001859138,0.00002837978,0.000107043306,0.0011396179,0.000022134933,0.00007715292,0.001264115],"study_design_scores_gemma":[0.000008450781,0.00012142862,0.99762243,0.0000050926615,0.000045713256,0.0006860446,0.00017114072,0.00065812276,0.0003360207,0.00007815028,0.00026088033,0.000006509254],"about_ca_topic_score_codex":0.0011189843,"about_ca_topic_score_gemma":0.0017967254,"teacher_disagreement_score":0.002529489,"about_ca_system_score_codex":0.0002332726,"about_ca_system_score_gemma":0.00037274056,"threshold_uncertainty_score":0.008462012},"labels":[],"label_agreement":null},{"id":"W4409259105","doi":"10.1016/j.modpat.2025.100767","title":"Spatially Resolved Single-Cell Morphometry of Benign Breast Disease Biopsy Images Uncovers Quantitative Cytomorphometric Features Predictive of Subsequent Invasive Breast Cancer Risk","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"U.S. Department of Health and Human Services; National Cancer Institute; National Institutes of Health; Division of Cancer Epidemiology and Genetics, National Cancer Institute; Kaiser Permanente; Breast Cancer Research Foundation","keywords":"Breast cancer; Medicine; Biopsy; Pathology; Disease; Cancer; Internal medicine","score_opus":0.012527877926647533,"score_gpt":0.2462412282863282,"score_spread":0.23371335035968066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409259105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981554,0.00025872898,0.0011393487,0.000014550347,0.0000020454656,0.000005136242,0.00020608718,0.000017478713,0.00020116444],"genre_scores_gemma":[0.99874413,0.00008795461,0.0008666483,0.0000075126854,0.000002849732,0.0000037176126,0.00021438245,0.0000022101412,0.00007050979],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.999759,0.000051455223,0.000017807548,0.000074499825,0.00006923964,0.000027970225],"domain_scores_gemma":[0.9992854,0.00018271556,0.0002969791,0.00008693059,0.00010195232,0.00004600113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040783448,0.00012322972,0.00020649316,0.0010263646,0.00016295162,0.0004983748,0.00014183566,0.00023224884,0.00048497552],"category_scores_gemma":[0.0012511994,0.0001673362,0.00014890832,0.00064241973,0.00020586682,0.00023332352,0.000271435,0.00014797978,0.00013645155],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021571718,0.000023484816,0.9663558,0.000023887702,0.000049475562,0.0000787628,0.00008090267,0.0004443964,0.023330323,0.000044605426,0.00010329565,0.009249267],"study_design_scores_gemma":[0.0000019802899,0.000028919767,0.99472284,0.0000033012595,0.000018007764,0.0003130083,0.000121533114,0.0023650923,0.0022355088,0.00005039019,0.00013566832,0.0000037847683],"about_ca_topic_score_codex":0.0032260304,"about_ca_topic_score_gemma":0.0059344303,"teacher_disagreement_score":0.0032260304,"about_ca_system_score_codex":0.00024285211,"about_ca_system_score_gemma":0.00012170693,"threshold_uncertainty_score":0.0064145327},"labels":[],"label_agreement":null},{"id":"W4409349051","doi":"10.1016/j.modpat.2025.100770","title":"The Histologic Spectrum of Rituximab-Associated Common Variable Immunodeficiency-Like Enteropathy","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Immunodeficiency and Autoimmune Disorders","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"University of Chicago Medicine","keywords":"Common variable immunodeficiency; Enteropathy; Medicine; Pathology; Broad spectrum; Rituximab; Immunodeficiency; Immunology; Lymphoma; Disease; Antibody; Immune system","score_opus":0.004823958256880624,"score_gpt":0.21254024288946954,"score_spread":0.20771628463258893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409349051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9744554,0.0037699076,0.0020411038,0.00018141855,0.000028251801,0.00006686993,0.00019224585,0.00007905087,0.019185765],"genre_scores_gemma":[0.99789906,0.00095758185,0.00062227814,0.000051383795,0.000031686057,0.000005454761,0.000066483706,0.0000071580957,0.0003589535],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9997571,0.00005277682,0.00003058522,0.00003590708,0.000049633778,0.00007403704],"domain_scores_gemma":[0.9995103,0.00017055572,0.00010430058,0.00005252171,0.00007472653,0.00008766404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049377914,0.00060128694,0.00029355666,0.002211701,0.00035371652,0.0004444511,0.00031352887,0.00036276036,0.0023017707],"category_scores_gemma":[0.001046992,0.00025243257,0.00020121472,0.00082980935,0.0005959527,0.00042439866,0.0004132848,0.00029604515,0.000467484],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014040276,0.00021469816,0.3594047,0.00038135212,0.00011028361,0.51452386,0.00031758455,0.00075112167,0.075297,0.0015495581,0.0008481975,0.045197625],"study_design_scores_gemma":[0.000054703018,0.0002838395,0.27664286,0.00008613144,0.00010931775,0.71175146,0.00033751858,0.00096572825,0.0072460505,0.0008471713,0.001660638,0.000014602454],"about_ca_topic_score_codex":0.00049678923,"about_ca_topic_score_gemma":0.000752688,"teacher_disagreement_score":0.0023017707,"about_ca_system_score_codex":0.00025777527,"about_ca_system_score_gemma":0.00022937196,"threshold_uncertainty_score":0.007700205},"labels":[],"label_agreement":null},{"id":"W4410246224","doi":"10.1016/j.modpat.2025.100790","title":"Malignant Chondroblastoma: An Epigenetically Distinct Subtype of Chondroblastoma With a Predilection for the Skeletally Mature","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Chondroblastoma; Pathology; Medicine; Hematopathology; Biology; Cytogenetics; Genetics","score_opus":0.009406613196834328,"score_gpt":0.26582688494905193,"score_spread":0.2564202717522176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410246224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980521,0.00050731294,0.000825767,0.000027757222,0.0000035264788,0.000015102397,0.000153826,0.000019324258,0.00039524064],"genre_scores_gemma":[0.99894184,0.00012429754,0.00037889575,0.000015472111,0.000012756708,0.0000067674428,0.00018987032,0.0000046112555,0.00032561374],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99988556,0.000009945695,0.000017131752,0.00003434547,0.000030986525,0.000022038295],"domain_scores_gemma":[0.99974567,0.000037136742,0.000118508455,0.000029779374,0.000030747568,0.000038233826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110461195,0.0001978934,0.00021061278,0.00045786708,0.0001703548,0.00018707379,0.00013500784,0.00025462158,0.0011158389],"category_scores_gemma":[0.00041343964,0.00009882481,0.0000965017,0.0003874584,0.00024066283,0.00014723859,0.00021080044,0.00010504722,0.00039179667],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007356006,0.000088443165,0.50742555,0.000191902,0.000054810178,0.03798932,0.00059729797,0.00016595972,0.42312145,0.0003242919,0.00040820538,0.028897155],"study_design_scores_gemma":[0.000027710183,0.000348798,0.67417467,0.000016746104,0.00003387112,0.2869194,0.00024558342,0.0006644409,0.03413433,0.00020346158,0.0032182964,0.000012617233],"about_ca_topic_score_codex":0.00037127145,"about_ca_topic_score_gemma":0.0007606746,"teacher_disagreement_score":0.0011158389,"about_ca_system_score_codex":0.000106823776,"about_ca_system_score_gemma":0.00011258171,"threshold_uncertainty_score":0.0037328005},"labels":[],"label_agreement":null},{"id":"W4410740729","doi":"10.1016/j.modpat.2025.100798","title":"International Feasibility of Applying Diagnostic Essential Criteria of the Fifth Edition World Health Organization Classification of Female Genital Tumors: Evidence for a Global Gap in Health Care Equity","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre","funders":"","keywords":"Female circumcision; Equity (law); Medicine; Health care; Sex organ; Pathology; Global health; Medical physics; Family medicine; Gynecology; Political science; Biology; Public health","score_opus":0.11227346829464953,"score_gpt":0.4429241882260351,"score_spread":0.33065071993138556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410740729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8094632,0.021979276,0.0147798695,0.045557994,0.0043616146,0.0012340407,0.011648867,0.00009020659,0.090884894],"genre_scores_gemma":[0.98701954,0.0017797882,0.004998745,0.0018255846,0.0002761143,0.00031597394,0.0028023736,0.000031093445,0.0009506676],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.97849566,0.013049319,0.0018240988,0.0017843918,0.003195896,0.0016507074],"domain_scores_gemma":[0.92919296,0.03831317,0.009741646,0.0080114985,0.012555826,0.0021849491],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.04673115,0.0004032841,0.00051956903,0.0025288777,0.00077779393,0.0019521436,0.0016303143,0.0009887966,0.006260957],"category_scores_gemma":[0.09632459,0.00025824909,0.0009026496,0.0039052574,0.0016453776,0.0029773787,0.0026225508,0.0014600515,0.0006850848],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005999742,0.0001802812,0.9100686,0.00032041283,0.00016367818,0.00005759161,0.00082081155,0.00047405387,0.00021281818,0.006565256,0.0057969242,0.0747396],"study_design_scores_gemma":[0.00017132172,0.00050115434,0.95446265,0.0014687005,0.00035283488,0.0003543231,0.004922527,0.0031065715,0.0007024706,0.008957196,0.02494607,0.00005417264],"about_ca_topic_score_codex":0.01338133,"about_ca_topic_score_gemma":0.010485216,"teacher_disagreement_score":0.04673115,"about_ca_system_score_codex":0.0014538608,"about_ca_system_score_gemma":0.0046938523,"threshold_uncertainty_score":0.24714094},"labels":[],"label_agreement":null},{"id":"W4411396336","doi":"10.1016/j.modpat.2025.100822","title":"Clinicopathologic, Immunohistochemical, and Molecular Analysis of Primary Ovarian Carcinoid Tumors With Correlation of Ki67 Proliferation Index With Patient Outcomes","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University; Sunnybrook Health Science Centre","funders":"","keywords":"Immunohistochemistry; Pathology; Proliferation index; Medicine; Proliferative index; Appendix; Correlation; Biology","score_opus":0.009086475787830754,"score_gpt":0.28443745962761263,"score_spread":0.2753509838397819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411396336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99859077,0.0003237091,0.00016610252,0.000034574572,0.000006940052,0.000004613509,0.00014432572,0.000005188884,0.0007237603],"genre_scores_gemma":[0.9996258,0.00006291754,0.00005123963,0.000008060076,0.0000067346373,0.0000036515924,0.00011914763,0.0000012751394,0.00012111353],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99974066,0.000048184476,0.000038801372,0.000050642302,0.000057323825,0.000064298845],"domain_scores_gemma":[0.99896455,0.0003192454,0.00029607117,0.00006858877,0.000121824465,0.00022971719],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048883585,0.00016122448,0.00020607655,0.0008166673,0.00030210117,0.00042226407,0.00017572162,0.00025906807,0.0016564991],"category_scores_gemma":[0.0018429302,0.00016156444,0.00022079343,0.00072078925,0.00036628687,0.00041452926,0.00029970947,0.00030945687,0.0001950053],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022485325,0.000014886483,0.9962953,0.0000074386676,0.000022755008,0.00037360724,0.000032251206,0.000057220597,0.001481667,0.00002232687,0.00005851981,0.0014090913],"study_design_scores_gemma":[0.0000051431193,0.000073592826,0.99691975,0.0000025859629,0.000030323567,0.0017721518,0.00015579542,0.00031187077,0.0004359287,0.00006595724,0.00022371707,0.000003255343],"about_ca_topic_score_codex":0.0008240655,"about_ca_topic_score_gemma":0.0013513234,"teacher_disagreement_score":0.0016564991,"about_ca_system_score_codex":0.00025581903,"about_ca_system_score_gemma":0.00034599638,"threshold_uncertainty_score":0.005541563},"labels":[],"label_agreement":null},{"id":"W4411404848","doi":"10.1016/j.modpat.2025.100825","title":"HER2, HER3, and Mismatch Repair Protein Expression in Stage IV Small Bowel Adenocarcinoma: Results From a Multicenter Series","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Gastrointestinal Tumor Research and Treatment","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Istituto di Ricovero e Cura a Carattere Scientifico; Ministero dell'Istruzione e del Merito; Università degli Studi di Pavia; Ministero dell’Istruzione, dell’Università e della Ricerca; Ministero della Salute; Dipartimenti di Eccellenza; Fondazione IRCCS Policlinico San Matteo","keywords":"Pathology; Adenocarcinoma; Stage (stratigraphy); Medicine; Protein expression; Series (stratigraphy); Oncology; Internal medicine; Biology; Cancer","score_opus":0.021919314200100022,"score_gpt":0.27730669329429986,"score_spread":0.25538737909419984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411404848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99922967,0.00033453098,0.00007444241,0.0000056738672,0.0000023424982,0.0000079855645,0.00012530625,0.000003223796,0.00021685238],"genre_scores_gemma":[0.99909055,0.00024367397,0.00011514164,0.000012427934,0.00001201104,0.000013348558,0.00041314145,0.000004156101,0.00009551587],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995851,0.000117297874,0.000067117275,0.00011700918,0.00007024941,0.000043180295],"domain_scores_gemma":[0.999161,0.00017254372,0.0002529296,0.00013007909,0.00014645801,0.00013683739],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006508693,0.00030772225,0.00041468872,0.0009126129,0.00028589874,0.00039423967,0.00022845417,0.00027521717,0.00070658704],"category_scores_gemma":[0.0013452863,0.00017052657,0.00040981232,0.00073007675,0.00024748876,0.00025676936,0.00034908616,0.00014854768,0.0002484946],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004927349,0.000083406885,0.99002445,0.000023819115,0.00008907342,0.00058529625,0.00025153504,0.00004615206,0.0033699125,0.000009204868,0.00009430729,0.0049302233],"study_design_scores_gemma":[0.000025899557,0.0005726388,0.9950688,0.000008336225,0.00011193684,0.00240941,0.00025322972,0.00011504357,0.00086650456,0.000009291841,0.000552413,0.000006457407],"about_ca_topic_score_codex":0.0013872015,"about_ca_topic_score_gemma":0.0014641234,"teacher_disagreement_score":0.0013872015,"about_ca_system_score_codex":0.00023955914,"about_ca_system_score_gemma":0.00017488068,"threshold_uncertainty_score":0.0034421682},"labels":[],"label_agreement":null},{"id":"W4412717865","doi":"10.1016/j.modpat.2025.100852","title":"Magnetic Resonance Imaging (MRI)–Adapted Prostate Cancer Risk Tool Incorporating Cribriform and Intraductal Carcinoma","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Sunnybrook Health Science Centre","funders":"","keywords":"Cribriform; Prostate cancer; Medicine; Pathology; Prostate; Cancer; Carcinoma; Radiology; Prostate carcinoma; Internal medicine","score_opus":0.008224255828305924,"score_gpt":0.24957722687659925,"score_spread":0.24135297104829334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412717865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7523786,0.022506999,0.11099159,0.0070857154,0.0009637868,0.0012027515,0.011083896,0.0035861994,0.09020043],"genre_scores_gemma":[0.9163137,0.003373856,0.0675799,0.0013865127,0.0003027983,0.00016542224,0.0032499228,0.00015165556,0.0074762865],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995901,0.00008361131,0.00006105618,0.000069466296,0.00014390938,0.00005191861],"domain_scores_gemma":[0.9992236,0.00019397642,0.00020970433,0.000034419038,0.00024940557,0.000088961126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006213934,0.00075701514,0.00043574686,0.0035440659,0.00035817176,0.0012553422,0.0006604421,0.0006843621,0.0040424946],"category_scores_gemma":[0.0037701016,0.00025338965,0.0006540134,0.0014089181,0.00024028198,0.0007539299,0.00095049577,0.0007053854,0.001160071],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011386538,0.00029564445,0.6298097,0.0009849911,0.00047931183,0.004013258,0.0002473507,0.007825925,0.015304023,0.0031179173,0.023369322,0.3134139],"study_design_scores_gemma":[0.00015579005,0.0010502405,0.79291785,0.0009851673,0.0015218459,0.033618335,0.0006761167,0.049272217,0.022345616,0.008061421,0.08911125,0.00028409885],"about_ca_topic_score_codex":0.0045829806,"about_ca_topic_score_gemma":0.0071819904,"teacher_disagreement_score":0.0045829806,"about_ca_system_score_codex":0.00034094724,"about_ca_system_score_gemma":0.00073377,"threshold_uncertainty_score":0.013523519},"labels":[],"label_agreement":null},{"id":"W4413027569","doi":"10.1016/j.modpat.2025.100846","title":"Human Papillomavirus–Associated Penile Squamous Cell Carcinoma With Acquired p16 Null Immunophenotype","year":2025,"lang":"en","type":"letter","venue":"Modern Pathology","topic":"Genital Health and Disease","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Immunophenotyping; Pathology; Human papillomavirus; Basal cell; Medicine; Null (SQL); Flow cytometry; Internal medicine; Immunology","score_opus":0.015831630900687534,"score_gpt":0.26057593457941236,"score_spread":0.24474430367872482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413027569","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17048031,0.004754862,0.0012644093,0.6595897,0.034123477,0.00022478205,0.0006380241,0.00013873675,0.1287857],"genre_scores_gemma":[0.72154963,0.003792814,0.0013373342,0.18021072,0.038728967,0.0000926342,0.00026634304,0.00008014851,0.053941477],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99938357,0.00013190629,0.00006094804,0.000092504924,0.00014065983,0.00019033544],"domain_scores_gemma":[0.998912,0.0005013916,0.00008772585,0.00006854135,0.00014497203,0.00028538777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005538764,0.00059883174,0.0005427651,0.00067520613,0.0020148703,0.0011977918,0.0008724254,0.011367114,0.0059936275],"category_scores_gemma":[0.005292779,0.00042491133,0.00065830897,0.0004969941,0.0012290218,0.0013022065,0.00065690756,0.007314409,0.0011365343],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015892953,0.00009796483,0.0113096945,0.00007077924,0.000025049558,0.8995129,0.0003049338,0.00018334138,0.0013132675,0.0033575075,0.07668353,0.0069820485],"study_design_scores_gemma":[0.00014245982,0.0002897612,0.019151133,0.0002324658,0.00007368577,0.8519737,0.0011613579,0.002605636,0.0012604141,0.0065897196,0.11645831,0.000061332474],"about_ca_topic_score_codex":0.0055595418,"about_ca_topic_score_gemma":0.0065211332,"teacher_disagreement_score":0.011367114,"about_ca_system_score_codex":0.002003155,"about_ca_system_score_gemma":0.00148524,"threshold_uncertainty_score":0.020050704},"labels":[],"label_agreement":null},{"id":"W4413108439","doi":"10.1016/j.modpat.2025.100868","title":"Clinicopathologic and Genomic Characterization of SMARCA4-Deficient Carcinoma of the Gallbladder","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Beijing Institute of Genomics, Chinese Academy of Sciences; Key Research and Development Projects of Shaanxi Province; Geneseeq Technology; National Natural Science Foundation of China; Xi'an Jiaotong University","keywords":"SMARCA4; Tissue microarray; Pathology; Biology; Immunohistochemistry; Gallbladder; Hematopathology; Carcinoma; Cancer research; Medicine; Chromatin remodeling; Internal medicine; Chromatin","score_opus":0.007838858207914553,"score_gpt":0.2363423215010196,"score_spread":0.22850346329310506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413108439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979448,0.0003808008,0.0004032999,0.000036362282,0.000003776331,0.000010499977,0.000073209754,0.000013749463,0.0011335835],"genre_scores_gemma":[0.9995695,0.00008989858,0.00016072778,0.000007677801,0.000005075583,0.000003187911,0.000059495487,0.0000024461006,0.000102004444],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981314,0.000031644304,0.000028497438,0.000042484386,0.0000331613,0.0000511788],"domain_scores_gemma":[0.99945515,0.00015429882,0.00011383673,0.00008600948,0.00004361988,0.00014720655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039473004,0.00040578705,0.0003113897,0.0017657006,0.00044746106,0.00048231473,0.0003506996,0.0004699749,0.001439189],"category_scores_gemma":[0.0009823972,0.00036543584,0.0002593241,0.0009209627,0.0007458548,0.00036791264,0.00040983033,0.0002722971,0.00028394535],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018863357,0.000077679375,0.6812611,0.00011737639,0.00006597859,0.17119013,0.0005193631,0.0005489008,0.13700521,0.00084679737,0.00029344225,0.006187735],"study_design_scores_gemma":[0.000049529248,0.00030989747,0.5915119,0.000021171087,0.00018384,0.37813812,0.00112006,0.0023421042,0.023344744,0.00074530084,0.0022011383,0.000032296495],"about_ca_topic_score_codex":0.0006943581,"about_ca_topic_score_gemma":0.00055471883,"teacher_disagreement_score":0.0017657006,"about_ca_system_score_codex":0.00022599802,"about_ca_system_score_gemma":0.00022700074,"threshold_uncertainty_score":0.004814565},"labels":[],"label_agreement":null},{"id":"W4413869842","doi":"10.1016/j.modpat.2025.100878","title":"Cross-Platform Methylation-Based Site of Origin Classification for Squamous Cell Carcinomas","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Cancer Diagnosis and Treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University Health Network; BC Children's Hospital; Princess Margaret Cancer Centre; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Vancouver Coastal Health Research Institute; Genome British Columbia; Terry Fox Research Institute; Canada Foundation for Innovation; Genome Canada","keywords":"Methylation; Pathology; Basal cell; Medicine; Biology; Computational biology; Genetics; Gene","score_opus":0.04556456077633543,"score_gpt":0.34514167778483706,"score_spread":0.29957711700850165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413869842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94896066,0.0019511025,0.038007777,0.00026824785,0.00012414488,0.00026401348,0.0051078834,0.001860023,0.0034562259],"genre_scores_gemma":[0.9708156,0.00023417847,0.021483252,0.00015331707,0.000061702536,0.00013039801,0.005726643,0.000073007825,0.0013218131],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992861,0.00013268797,0.00008280643,0.0002564063,0.00014780422,0.000094145515],"domain_scores_gemma":[0.99881625,0.00040821085,0.00017713025,0.0001685032,0.00031712838,0.000112789334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001449685,0.0006738594,0.00064955646,0.0016389575,0.0003649006,0.0006055081,0.0005370106,0.00058164325,0.0019936373],"category_scores_gemma":[0.00367781,0.0002207911,0.000640101,0.00041056037,0.00017532012,0.0004978696,0.0011091,0.0005649331,0.0009487307],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021615676,0.00032373643,0.58516073,0.00042414654,0.0009309984,0.00062101195,0.00031478048,0.020166678,0.09876796,0.00057032227,0.009337014,0.281221],"study_design_scores_gemma":[0.00019180072,0.001392996,0.2888665,0.00020567523,0.000653824,0.002423829,0.00039686207,0.5627414,0.12667048,0.0036619727,0.012635908,0.00015876048],"about_ca_topic_score_codex":0.0020638136,"about_ca_topic_score_gemma":0.005228931,"teacher_disagreement_score":0.0020638136,"about_ca_system_score_codex":0.00029235455,"about_ca_system_score_gemma":0.00040658237,"threshold_uncertainty_score":0.0076667666},"labels":[],"label_agreement":null},{"id":"W4413971415","doi":"10.1016/j.modpat.2025.100875","title":"Follicular Helper T-Cell Lymphomas With Epstein-Barr Virus–Positive Neoplastic Cells: A Rare Scenario With Diagnostic Implications","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cégep de Rimouski; Université du Québec à Rimouski","funders":"National Institutes of Health; Université de Paris; Université Paris-Est Créteil Val-de-Marne; Institut National de la Santé et de la Recherche Médicale","keywords":"Pathology; Follicular phase; Hematopathology; Medicine; Epstein–Barr virus; B cell; Follicular lymphoma; Biology; Lymphoma; Immunology; Virus; Internal medicine; Cytogenetics; Antibody","score_opus":0.006273001952489797,"score_gpt":0.22287717096907378,"score_spread":0.21660416901658397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413971415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82300794,0.035306107,0.03755252,0.016366052,0.0016827179,0.00042689487,0.00093854824,0.0011337254,0.08358551],"genre_scores_gemma":[0.9823301,0.0040812427,0.0057886154,0.0016110792,0.003989875,0.000052692572,0.00025436358,0.00005056678,0.0018414323],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9989373,0.00025235576,0.00009615667,0.00021669116,0.00014800564,0.0003494789],"domain_scores_gemma":[0.99806696,0.0007559338,0.00043482156,0.000276372,0.00014141895,0.0003243561],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006228152,0.0018155038,0.0009347234,0.0025246884,0.0019999233,0.0028324043,0.0012584163,0.007079002,0.0055750855],"category_scores_gemma":[0.004607962,0.00089058647,0.00062099204,0.0015186634,0.0020868925,0.0034673987,0.0019471073,0.0030358126,0.0029782804],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013233368,0.000036512494,0.008613362,0.000073375035,0.000012627444,0.9790411,0.00015595973,0.00010188563,0.0019212432,0.002028407,0.0013213593,0.0065618185],"study_design_scores_gemma":[0.000013579239,0.000020589177,0.00089241704,0.000017525326,0.00001595748,0.99522865,0.00012023847,0.00022293962,0.00048754457,0.0013505495,0.0016215182,0.000008603638],"about_ca_topic_score_codex":0.00034612787,"about_ca_topic_score_gemma":0.00032397997,"teacher_disagreement_score":0.007079002,"about_ca_system_score_codex":0.0007417289,"about_ca_system_score_gemma":0.00044241245,"threshold_uncertainty_score":0.018650532},"labels":[],"label_agreement":null},{"id":"W4413996651","doi":"10.1016/j.modpat.2025.100881","title":"Epstein-Barr Virus–Associated Gastric Cancer: A Histopathologic Study With Comprehensive Molecular Profiling","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Università degli Studi di Padova; European Commission","keywords":"Pathology; Profiling (computer programming); Medicine; Cytopathology; Computer science; Cytology","score_opus":0.015681577833434292,"score_gpt":0.28071635996665484,"score_spread":0.26503478213322057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413996651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646556,0.001983839,0.00053643965,0.000021694294,0.0000039905735,0.000025228781,0.00025428509,0.000019408417,0.00068942946],"genre_scores_gemma":[0.9970181,0.000998807,0.0010894898,0.000020930784,0.000011069433,0.00001877725,0.0005977522,0.0000049345867,0.00024017283],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998307,0.000025142173,0.000020753601,0.000046238285,0.000042885167,0.000034260596],"domain_scores_gemma":[0.9998305,0.000020732352,0.00004285613,0.00002072057,0.00004575889,0.00003929854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004274786,0.00023204587,0.0002868404,0.0018071876,0.00026106558,0.0004951636,0.00014394725,0.0002238763,0.00067398266],"category_scores_gemma":[0.00031609437,0.00019109593,0.00021367312,0.0009673531,0.00020874511,0.00036746098,0.0005582157,0.00013598705,0.00019047706],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004011004,0.000048882746,0.8962048,0.00011289807,0.000119239914,0.0016613429,0.00017654411,0.00013172413,0.07640582,0.00007349655,0.00025582628,0.024408367],"study_design_scores_gemma":[0.0000066660455,0.00013345639,0.9884779,0.000013622149,0.00008598877,0.0067760395,0.00021978618,0.00037801915,0.0022332813,0.000048874288,0.0016193062,0.0000070808665],"about_ca_topic_score_codex":0.00056097965,"about_ca_topic_score_gemma":0.0010157218,"teacher_disagreement_score":0.0018071876,"about_ca_system_score_codex":0.00018466549,"about_ca_system_score_gemma":0.0001819298,"threshold_uncertainty_score":0.0022608042},"labels":[],"label_agreement":null},{"id":"W4414532880","doi":"10.1016/j.modpat.2025.100897","title":"Whole-Slide Imaging and Radiological Features Predict Clinical Outcomes in Patients With Neuroendocrine Tumors of the Lung","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Institut de Valorisation des Données","keywords":"Radiomics; Concordance; Neuroendocrine tumors; Proportional hazards model; Retrospective cohort study; Lung; Radiological weapon; Overall survival","score_opus":0.010691424390306806,"score_gpt":0.3212971461198748,"score_spread":0.310605721729568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414532880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99865556,0.0004826622,0.0000778466,0.00007714766,0.000010715362,0.000002562186,0.00011110163,0.0000043208715,0.00057807856],"genre_scores_gemma":[0.99950576,0.00011122348,0.000046826943,0.000018607969,0.000015788915,0.0000017353196,0.0001787167,0.0000016685415,0.0001195899],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983025,0.000032088537,0.000020266454,0.000038655922,0.000037470567,0.00004123874],"domain_scores_gemma":[0.9989237,0.00035831364,0.00033665478,0.00006128851,0.000094308496,0.00022565403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002698126,0.0002666741,0.00026441953,0.00040358907,0.00023788193,0.00074691465,0.00031068068,0.000516354,0.0014967354],"category_scores_gemma":[0.0025005902,0.00016585556,0.000214571,0.00047243203,0.0003645904,0.0006850267,0.00044064637,0.00049048086,0.00031889972],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008874642,0.000012391813,0.9977069,0.00000539931,0.000016279924,0.00020646994,0.000019305638,0.000055094075,0.00057942414,0.000007952314,0.0000658454,0.001236142],"study_design_scores_gemma":[0.0000042950446,0.000054692402,0.9975605,0.000004555668,0.000029126248,0.001336025,0.0002025576,0.00036185776,0.00020892071,0.00006483341,0.00016903286,0.000003711589],"about_ca_topic_score_codex":0.0008611193,"about_ca_topic_score_gemma":0.0016194854,"teacher_disagreement_score":0.0014967354,"about_ca_system_score_codex":0.00019301026,"about_ca_system_score_gemma":0.0001877686,"threshold_uncertainty_score":0.005007088},"labels":[],"label_agreement":null},{"id":"W4415027654","doi":"10.1016/j.modpat.2025.100893","title":"Corrigendum to “Magnetic Resonance Imaging (MRI)–Adapted Prostate Cancer Risk Tool Incorporating Cribriform and Intraductal Carcinoma” (Modern Pathology 2025 Dec;38(12):100852)","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Radiomics and Machine Learning in Medical Imaging","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Sunnybrook Health Science Centre","funders":"","keywords":"Cribriform; Prostate cancer; Magnetic resonance imaging; Anatomical pathology; Biopsy","score_opus":0.009522474384345479,"score_gpt":0.2667779797980237,"score_spread":0.2572555054136782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415027654","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009578541,0.0010558208,0.0004728655,0.05205285,0.9396978,0.00004744431,0.00070479605,0.0003276762,0.0055448534],"genre_scores_gemma":[0.005037071,0.004056056,0.0017362076,0.14213346,0.5287069,0.00018792601,0.0025368973,0.00069413113,0.3149113],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967997,0.0005132183,0.00039961096,0.0005360564,0.0013868713,0.00036453933],"domain_scores_gemma":[0.9769429,0.0037894617,0.0007278684,0.00094216404,0.016136413,0.0014611891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023463503,0.0014327447,0.002091999,0.0029522649,0.0020414423,0.0029834176,0.0023523443,0.00746784,0.15627441],"category_scores_gemma":[0.03649692,0.0009816197,0.002160293,0.001101686,0.0011454261,0.0011475562,0.0024585745,0.006263943,0.10672609],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008974192,0.0000039052156,0.000039505238,0.00002739589,0.0000040881605,0.00007772669,0.0000042172283,0.000013167564,0.000026861446,0.00006721433,0.99720865,0.0025183747],"study_design_scores_gemma":[0.000034129025,0.00002825351,0.0014936146,0.00017460575,0.000034718658,0.0005141043,0.00003259501,0.00027622096,0.0002538665,0.00056674134,0.9965603,0.00003090436],"about_ca_topic_score_codex":0.017358145,"about_ca_topic_score_gemma":0.03498962,"teacher_disagreement_score":0.15627441,"about_ca_system_score_codex":0.0030681458,"about_ca_system_score_gemma":0.0029417987,"threshold_uncertainty_score":0.52278996},"labels":[],"label_agreement":null},{"id":"W4415043668","doi":"10.1016/j.modpat.2025.100906","title":"Clinicopathologic and Molecular Genetic Features of Spindle Cell Rhabdomyosarcoma Harboring ZFP64::NCOA2/3 Fusions: A Series of 14 Cases","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"National Cancer Institute; National Institutes of Health","keywords":"Desmin; Spindle cell sarcoma; Rhabdomyosarcoma; Myogenin; Mediastinum; Thigh; Sarcoma; Soft tissue","score_opus":0.01774055642994274,"score_gpt":0.287978256223815,"score_spread":0.27023769979387224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415043668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99631244,0.0006793793,0.00094770006,0.00005034265,0.000017146529,0.000047537767,0.00008173812,0.000026693138,0.0018369692],"genre_scores_gemma":[0.99862933,0.0003279429,0.00047867367,0.000026252312,0.000031896136,0.000022433045,0.00009387087,0.000008807775,0.0003808433],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99936897,0.00006599895,0.00010295711,0.00019316723,0.00012521738,0.00014371517],"domain_scores_gemma":[0.99901235,0.00026069005,0.00021871307,0.00015916617,0.00008542917,0.00026356208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059906265,0.0015026317,0.00057968847,0.00210651,0.0013000625,0.00086415646,0.00075456704,0.0011159222,0.0013786146],"category_scores_gemma":[0.0017212204,0.00088541716,0.00066807814,0.0011940929,0.0021187468,0.0007710864,0.0014276747,0.0006647253,0.00059866137],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024231127,0.00017513585,0.24293368,0.000067441084,0.00009418057,0.7334065,0.0010119525,0.00062929303,0.011725005,0.00021298841,0.00037491723,0.00912665],"study_design_scores_gemma":[0.000035541696,0.000305825,0.13130207,0.000015965235,0.00010077164,0.8623618,0.00076139625,0.00066020223,0.002889434,0.00021655572,0.0013136873,0.000036752746],"about_ca_topic_score_codex":0.0009624886,"about_ca_topic_score_gemma":0.0013636688,"teacher_disagreement_score":0.00210651,"about_ca_system_score_codex":0.0006082666,"about_ca_system_score_gemma":0.0003907951,"threshold_uncertainty_score":0.004611969},"labels":[],"label_agreement":null},{"id":"W4415592088","doi":"10.1016/j.modpat.2025.100924","title":"Tumor Deposits in Colorectal Cancer: Definitions for Ninth Edition of the Tumor Node Metastasis Staging System","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Perineural invasion; Colorectal cancer; Lymph node; Lymph node metastasis; Metastasis; Primary tumor; Staging system","score_opus":0.02798306675258209,"score_gpt":0.2938933123890221,"score_spread":0.26591024563644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415592088","genre_codex":"commentary","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10542998,0.23097917,0.17133868,0.30471382,0.045634344,0.008615546,0.03165415,0.0014614743,0.10017295],"genre_scores_gemma":[0.33368132,0.07307325,0.47446632,0.034392633,0.0072117797,0.013448657,0.040869117,0.0005881521,0.022268867],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9921136,0.0029842986,0.001962876,0.0004608169,0.00200857,0.00046980422],"domain_scores_gemma":[0.9866665,0.0028583906,0.0025694536,0.00057705597,0.0066369027,0.0006917335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.014166763,0.00079773803,0.0008447957,0.005102207,0.00093654916,0.0015634507,0.0019722504,0.0011351082,0.0022549133],"category_scores_gemma":[0.023959454,0.00026706947,0.0016126743,0.0040447973,0.001740489,0.0019327089,0.0030596692,0.0040919716,0.001056796],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005883842,0.00014597276,0.12748495,0.0050682696,0.00027261683,0.0006384286,0.003754965,0.0017523717,0.002385985,0.04571828,0.40554276,0.406647],"study_design_scores_gemma":[0.000175303,0.0005671554,0.15243769,0.0070588714,0.00028088884,0.0036636018,0.003545572,0.003499811,0.0011904425,0.036312327,0.79098046,0.0002878663],"about_ca_topic_score_codex":0.009542547,"about_ca_topic_score_gemma":0.016881239,"teacher_disagreement_score":0.014166763,"about_ca_system_score_codex":0.004377143,"about_ca_system_score_gemma":0.007598552,"threshold_uncertainty_score":0.07492185},"labels":[],"label_agreement":null},{"id":"W4416010573","doi":"10.1016/j.modpat.2025.100932","title":"MSAI-Path: Predicting Microsatellite Instability From Routine Histology Slides Without Reinventing the Wheel","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"University of Bern; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Microsatellite instability; Digital pathology; Biopsy; Segmentation; Logistic regression; Lynch syndrome; Deep learning; Random forest","score_opus":0.018400850361906928,"score_gpt":0.27887370181941096,"score_spread":0.26047285145750404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416010573","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29511848,0.002497461,0.6477174,0.0014083793,0.0003717579,0.00047528383,0.005077111,0.04283202,0.0045021013],"genre_scores_gemma":[0.68805975,0.00065171986,0.29486623,0.00074831006,0.0001703851,0.000318443,0.0092348065,0.00084465987,0.0051056724],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9991351,0.000181758,0.00004933131,0.0003515248,0.00019492219,0.00008740728],"domain_scores_gemma":[0.99830747,0.00077966583,0.00023112667,0.00027531886,0.00030947375,0.0000969548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002002929,0.0017350082,0.00071606005,0.001872395,0.00035302824,0.0009361477,0.0017526695,0.0012875458,0.0020399517],"category_scores_gemma":[0.0051992834,0.00056529586,0.0010750854,0.0006812178,0.00044332497,0.0013567539,0.001707305,0.0013543101,0.0017185123],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010436117,0.00038683962,0.06343038,0.0003629758,0.0005622061,0.00037058358,0.00016999844,0.17942479,0.018624827,0.0017640254,0.031099485,0.70276016],"study_design_scores_gemma":[0.000047312515,0.0001806543,0.004264528,0.000028443754,0.000046769157,0.00018965226,0.000022216589,0.98427385,0.0061286595,0.002738834,0.0020465993,0.000032452266],"about_ca_topic_score_codex":0.007485167,"about_ca_topic_score_gemma":0.013264454,"teacher_disagreement_score":0.007485167,"about_ca_system_score_codex":0.0007180058,"about_ca_system_score_gemma":0.0015032758,"threshold_uncertainty_score":0.01488322},"labels":[],"label_agreement":null},{"id":"W4416094033","doi":"10.1016/j.modpat.2025.100934","title":"Clinical-Grade Interpretable Artificial Intelligence Tool for Automated Detection of Lymph Node Metastasis in Prostate Cancer","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; St. Michael's Hospital; University Health Network","funders":"Institute of Cancer Research; Canadian Institutes of Health Research","keywords":"Prostate cancer; Data set; Micrometastasis; Lymph node; Receiver operating characteristic; Training set; Test set; Deep learning","score_opus":0.03979989582514221,"score_gpt":0.36051716079902235,"score_spread":0.32071726497388015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416094033","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40214935,0.002512958,0.49250343,0.0029142105,0.0004997237,0.0010636221,0.018169772,0.05216957,0.028017452],"genre_scores_gemma":[0.6848107,0.00041361852,0.2981989,0.0007891135,0.00012791091,0.00032213566,0.00841372,0.0004969525,0.0064269393],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956053,0.00009046497,0.00008023348,0.00007878179,0.00014976386,0.00004021267],"domain_scores_gemma":[0.99841154,0.0006097064,0.00017284034,0.00010537001,0.0006026537,0.00009797635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071057695,0.00073096505,0.00034773277,0.0029419146,0.00023472973,0.0013131254,0.00071791414,0.00058142433,0.0046469313],"category_scores_gemma":[0.0042124065,0.00015598147,0.0003901469,0.0007353584,0.00013534153,0.00037478204,0.00047354162,0.00042616442,0.0014193165],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013855513,0.00071014446,0.0930162,0.0007586336,0.00025855654,0.0020964113,0.00039046007,0.015205504,0.05640752,0.0058482643,0.049527977,0.77439475],"study_design_scores_gemma":[0.00032869037,0.0010530527,0.102885574,0.0003555709,0.00067938725,0.0043277126,0.00043098084,0.6821574,0.12612149,0.015146837,0.06637315,0.00014023305],"about_ca_topic_score_codex":0.0025097798,"about_ca_topic_score_gemma":0.005223368,"teacher_disagreement_score":0.0046469313,"about_ca_system_score_codex":0.00040643377,"about_ca_system_score_gemma":0.0007767647,"threshold_uncertainty_score":0.015545547},"labels":[],"label_agreement":null},{"id":"W4416293230","doi":"10.1016/j.modpat.2025.100926","title":"Retinoblastoma Protein Loss in p53 Abnormal Endometrial Carcinoma Is Associated With Poor Clinical Outcomes in a Canadian Cohort","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"BC Cancer Foundation; Canada Research Chairs; Michael Smith Health Research BC; Terry Fox Research Institute; Canadian Cancer Society","keywords":"Cohort; Carcinoma; P53 protein; Immunohistochemistry; Cohort study; Retinoblastoma; Endometrial cancer","score_opus":0.017535649725244695,"score_gpt":0.3125200406339737,"score_spread":0.294984390908729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416293230","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921476,0.00071679393,0.0001448702,0.00061737874,0.000031577427,0.000026123938,0.002892506,0.000019101584,0.0034040376],"genre_scores_gemma":[0.9961599,0.0006408574,0.00017380112,0.00018695425,0.000022100337,0.000015978521,0.0012098638,0.000017995346,0.0015724677],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998838,0.000057030506,0.000053608626,0.00024918123,0.00032333657,0.00047895612],"domain_scores_gemma":[0.9974533,0.00012730395,0.00046039233,0.0001355601,0.0011509462,0.00067253807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006714406,0.0007621257,0.0006367781,0.002558178,0.0059459517,0.0017479407,0.002121815,0.0010229012,0.005257734],"category_scores_gemma":[0.0028258332,0.0008869966,0.0010612957,0.0051344666,0.0012744131,0.00058348814,0.001091529,0.0018148766,0.0006642343],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009800281,0.000026230875,0.9954615,0.000016571714,0.00005515782,0.00041814015,0.00073199807,0.000054630545,0.00030681002,0.00012274289,0.0012444888,0.0014637526],"study_design_scores_gemma":[0.00001573017,0.00003661802,0.9948318,0.000037051184,0.00007217867,0.0010709232,0.002025089,0.00018879236,0.00007085251,0.00007080125,0.001545865,0.000034244204],"about_ca_topic_score_codex":0.97760767,"about_ca_topic_score_gemma":0.9802611,"teacher_disagreement_score":0.022392333,"about_ca_system_score_codex":0.015751068,"about_ca_system_score_gemma":0.023085108,"threshold_uncertainty_score":0.11428249},"labels":[],"label_agreement":null},{"id":"W4416549088","doi":"10.1016/j.modpat.2025.100941","title":"DNA Methylation Profiling Classifies and Reveals Origin of Gynecologic Central Nervous System-Like Tumors","year":2025,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"National Institute of Neurological Disorders and Stroke; National Cancer Institute","keywords":"DNA methylation; Fluorescence in situ hybridization; Sarcoma; Methylation; Endometrial stromal sarcoma; In situ hybridization; Primitive neuroectodermal tumor; Cytogenetics","score_opus":0.022643371483472063,"score_gpt":0.2826699145773758,"score_spread":0.2600265430939037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416549088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926126,0.0022643695,0.001562537,0.00017719496,0.000013360135,0.000019347222,0.0010434364,0.000047636146,0.0022594642],"genre_scores_gemma":[0.997191,0.0007409959,0.0006666767,0.000054137996,0.000009811126,0.000007443318,0.0006716316,0.000015547359,0.00064269616],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99984336,0.000016147242,0.000012364224,0.000040346225,0.000043799966,0.00004401712],"domain_scores_gemma":[0.99981517,0.00003838965,0.00006160216,0.000016841204,0.000042976535,0.00002492646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019297161,0.00015994548,0.00021424127,0.0012832842,0.00021807794,0.0004229727,0.00021275687,0.00030216886,0.0010587],"category_scores_gemma":[0.0006073508,0.00012435442,0.0001733232,0.0005920014,0.00020247298,0.00017920438,0.00025211365,0.0002575915,0.00033775766],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005267129,0.000025981803,0.6617215,0.00008589001,0.0001189,0.00068201247,0.00032031274,0.0002338709,0.2930503,0.0003098963,0.0005101555,0.042414483],"study_design_scores_gemma":[0.000008662288,0.00013086732,0.94425505,0.000024531366,0.00012419253,0.0030888403,0.00032862273,0.001130441,0.04625654,0.00041939857,0.004223555,0.000009333941],"about_ca_topic_score_codex":0.0027471362,"about_ca_topic_score_gemma":0.005005663,"teacher_disagreement_score":0.0027471362,"about_ca_system_score_codex":0.00030714105,"about_ca_system_score_gemma":0.00022310727,"threshold_uncertainty_score":0.0054622293},"labels":[],"label_agreement":null},{"id":"W578787621","doi":"10.1038/modpathol.2015.64","title":"Mammary analog secretory carcinoma, low-grade salivary duct carcinoma, and mimickers: a comparative study","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":132,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Acinic cell carcinoma; Mammaglobin; Salivary duct carcinoma; Pathology; Salivary gland; Carcinoma; Biology; Medicine; Internal medicine; Mucoepidermoid carcinoma; Cancer","score_opus":0.07665654835540041,"score_gpt":0.31079858543453504,"score_spread":0.2341420370791346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W578787621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99897635,0.00028477618,0.000049105976,0.0000046147406,0.000003911985,0.000010293113,0.00004164809,0.0000014252769,0.00062797446],"genre_scores_gemma":[0.9992448,0.0002748325,0.0000826219,0.000010920323,0.000021505042,0.000006647532,0.00009044442,0.000002075912,0.00026606984],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99966097,0.00009529319,0.00004463713,0.00007055594,0.00006438047,0.000064118154],"domain_scores_gemma":[0.9993038,0.00030692606,0.00009870267,0.000076639,0.00007679776,0.00013706372],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005946825,0.00033760184,0.0005463973,0.0018740516,0.00054226996,0.00054329407,0.00035237076,0.000488666,0.0041395393],"category_scores_gemma":[0.0018733669,0.00022275612,0.00041039818,0.0009251561,0.0005234288,0.00078363775,0.00073748094,0.0002708314,0.00066121266],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009891047,0.0022065816,0.9214312,0.00019986411,0.00022045687,0.01963073,0.0016678851,0.00018275801,0.019505026,0.00056002353,0.0001920951,0.024312375],"study_design_scores_gemma":[0.00018962267,0.008889205,0.9276821,0.000019478937,0.00030776422,0.05396731,0.0035712498,0.0005250463,0.002731482,0.0004194128,0.0016531908,0.00004418619],"about_ca_topic_score_codex":0.0005683703,"about_ca_topic_score_gemma":0.0006945295,"teacher_disagreement_score":0.0041395393,"about_ca_system_score_codex":0.00030007714,"about_ca_system_score_gemma":0.00016583341,"threshold_uncertainty_score":0.013848126},"labels":[],"label_agreement":null},{"id":"W968857179","doi":"10.1038/modpathol.2015.84","title":"Infiltrative (sinusoidal) and hepatitic patterns of injury in acute cellular rejection in liver allograft with clinical implications","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Organ Transplantation Techniques and Outcomes","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Medicine; Acute hepatitis; Thymoglobulin; Cellular immunity; Pathology; Biopsy; Gastroenterology; Internal medicine; Immune system; Transplantation; Hepatitis; Immunology","score_opus":0.03015694495502498,"score_gpt":0.3272432602836353,"score_spread":0.29708631532861035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W968857179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963223,0.0020360833,0.00038151082,0.0000805888,0.000008240692,0.000011069126,0.000027696275,0.0000054776033,0.0011271535],"genre_scores_gemma":[0.99895716,0.0006092823,0.00020123886,0.00001715189,0.000033411758,0.0000046148984,0.000024029307,0.0000016871961,0.00015135545],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997267,0.00010416133,0.000035500598,0.000030040457,0.00004257408,0.00006103529],"domain_scores_gemma":[0.99949133,0.00011703749,0.00017731068,0.00003296896,0.0000747604,0.000106655854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073026394,0.00024637728,0.00023857446,0.0015881638,0.0002784477,0.00067937595,0.00029215866,0.00038029617,0.0019264193],"category_scores_gemma":[0.00094709505,0.00016599493,0.00016448036,0.0010322432,0.0007906955,0.0009852035,0.0006302801,0.00032902532,0.00028751013],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031323403,0.00020023913,0.939016,0.00015644898,0.000045025175,0.0063192993,0.0006441657,0.00027782744,0.01602441,0.0007992873,0.00019023914,0.03319483],"study_design_scores_gemma":[0.000042456842,0.0005440585,0.9785824,0.00004837611,0.000062442115,0.0140769705,0.0021395625,0.0008823663,0.0018549517,0.0010543269,0.0006962882,0.000015780914],"about_ca_topic_score_codex":0.000494558,"about_ca_topic_score_gemma":0.00065948133,"teacher_disagreement_score":0.0019264193,"about_ca_system_score_codex":0.00022436523,"about_ca_system_score_gemma":0.00020161705,"threshold_uncertainty_score":0.006444514},"labels":[],"label_agreement":null},{"id":"W995051720","doi":"10.1038/modpathol.2015.89","title":"Mismatch repair status may predict response to adjuvant chemotherapy in resectable pancreatic ductal adenocarcinoma","year":2015,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Vancouver General Hospital; Pancreas Centre (Canada); University of British Columbia","funders":"VGH and UBC Hospital Foundation; BC Cancer Foundation; Celgene; Sanofi","keywords":"Tissue microarray; Medicine; MSH6; MSH2; PMS2; Oncology; Internal medicine; Pancreatic cancer; DNA mismatch repair; Adenocarcinoma; Pathology; Malignancy; Cancer; Colorectal cancer","score_opus":0.03263650333741281,"score_gpt":0.29985358025502284,"score_spread":0.26721707691761004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W995051720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998587,0.00063801545,0.00009535872,0.000111563815,0.000016820326,0.0000020428326,0.00006588345,0.00000420669,0.00047919757],"genre_scores_gemma":[0.9994986,0.00014015299,0.00008649987,0.000019381298,0.000021293094,0.0000013094965,0.000074792464,0.0000018016141,0.00015605595],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998429,0.000052418767,0.000026529196,0.000024919163,0.000025162508,0.000028062937],"domain_scores_gemma":[0.99856853,0.0007038061,0.00043084315,0.00005528804,0.000082404724,0.00015920929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000390982,0.00023261117,0.00023608156,0.00067970296,0.00016252087,0.0004702191,0.00020981446,0.0003821161,0.0014028416],"category_scores_gemma":[0.0031131196,0.00014449927,0.00020086393,0.00064871414,0.00022855682,0.00032213476,0.00020912921,0.00036933972,0.0002118173],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006489967,0.000035354693,0.9922168,0.000014461435,0.00003306687,0.0002396885,0.000026407166,0.000179421,0.0015988905,0.000027631855,0.000093666364,0.0048855967],"study_design_scores_gemma":[0.000012292488,0.00020816005,0.99592495,0.000007739064,0.00008021032,0.0007858618,0.00011602394,0.0012604824,0.0009530667,0.00015057919,0.00049529807,0.000005333575],"about_ca_topic_score_codex":0.00087496446,"about_ca_topic_score_gemma":0.0015691067,"teacher_disagreement_score":0.0014028416,"about_ca_system_score_codex":0.00023843505,"about_ca_system_score_gemma":0.00016967668,"threshold_uncertainty_score":0.0046930313},"labels":[],"label_agreement":null}]}