{"meta":{"query_hash":"3ebce61ff971","filters":{"venue":"Molecular Cell"},"cohort_total":528,"direct_labels_cover":1,"predictions_cover":528,"exported":528,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/3ebce61ff971","api":"https://metacan.xera.ac/api/v1/cohort?venue=Molecular+Cell"},"results":[{"id":"W1547834895","doi":"10.1016/j.molcel.2015.03.030","title":"The Histone Chaperones FACT and Spt6 Restrict H2A.Z from Intragenic Locations","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Chromatin; Nucleosome; Genetics; Histone; RNA polymerase II; Promoter; Transcription (linguistics); Histone H1; Histone H2A; Chromatin remodeling; Cell biology; Histone code; Chaperone (clinical); Gene; Gene expression","score_opus":0.007169997369550671,"score_gpt":0.21670044061312715,"score_spread":0.20953044324357648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1547834895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851803,0.007273655,0.0045878403,0.00035100037,0.00012883024,0.00012246532,0.00001991017,0.000009278928,0.0023266762],"genre_scores_gemma":[0.99727166,0.0005358724,0.001017348,0.00016689382,0.00006485,0.0000124282915,0.00015720459,0.000023395269,0.00075035036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992773,0.00004494704,0.00014563318,0.0002514743,0.00010042591,0.00018024862],"domain_scores_gemma":[0.9993494,0.000011061232,0.000060814422,0.00041291863,0.000051624407,0.000114158356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000100967976,0.00012639446,0.000082715655,0.00001617953,0.00011294607,0.000048611404,0.00019602841,0.00009215372,0.00000419463],"category_scores_gemma":[0.000036759564,0.00010417842,0.000044595883,0.00004392285,0.00008855552,0.0000018790798,0.00013322316,0.000073240866,0.000018298751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027098995,0.000052916563,0.00045446123,0.000006030431,0.00004770931,0.000011525697,0.00014527,0.00031210022,0.9927106,0.0003028489,0.0022301038,0.0036993164],"study_design_scores_gemma":[0.0021147332,0.0005932828,0.0050057033,0.000012058809,0.00013523149,0.000029118786,0.00079437596,0.0050053005,0.6380259,0.0032695893,0.344154,0.0008607419],"about_ca_topic_score_codex":0.00010038947,"about_ca_topic_score_gemma":0.00007067955,"teacher_disagreement_score":0.35468474,"about_ca_system_score_codex":0.000021375792,"about_ca_system_score_gemma":0.00008053634,"threshold_uncertainty_score":0.42482728},"labels":[],"label_agreement":null},{"id":"W1558207160","doi":"10.1016/j.molcel.2009.10.008","title":"Biased Chromatin Signatures around Polyadenylation Sites and Exons","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Human Genome Research Institute; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Nucleosome; Chromatin; Exon; Histone; RNA splicing; Polyadenylation; Genetics; Biology; Histone code; Intron; RNA; Cell biology; DNA; Gene","score_opus":0.008321650769971625,"score_gpt":0.24762717527063696,"score_spread":0.23930552450066533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1558207160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915637,0.0029222693,0.0025299091,0.0002659885,0.000013538875,0.00013331263,0.0000040828986,0.000013749496,0.0025534914],"genre_scores_gemma":[0.99717104,0.00006694053,0.0009960169,0.0005605049,0.000062942854,0.0000038197195,0.00009685312,0.000011975329,0.0010299308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923724,0.0000496359,0.0001031925,0.00025140212,0.00013379165,0.00022475388],"domain_scores_gemma":[0.9996165,0.000007701002,0.000033172117,0.0002101146,0.000031111776,0.00010137263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000092612994,0.00011437022,0.000085441985,0.000048941856,0.00007820111,0.00005691848,0.00009370285,0.0001093877,0.000011817807],"category_scores_gemma":[0.000047660244,0.00010974453,0.000048657395,0.000070913586,0.000034375058,0.0000037206908,0.00003497303,0.00008708821,0.00000764666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002160171,0.000030795105,0.00028511384,0.000007910778,0.0000077051845,0.000019634255,0.000013125045,0.000072720635,0.9970838,0.00004793846,0.00059143436,0.0018182609],"study_design_scores_gemma":[0.00041490555,0.00032102753,0.0034385296,0.0000072238377,0.000007991259,0.0000054655147,0.000028675076,0.0009094847,0.9927447,0.00014796414,0.001820247,0.00015379796],"about_ca_topic_score_codex":0.0000109853845,"about_ca_topic_score_gemma":0.0000057205702,"teacher_disagreement_score":0.0056073577,"about_ca_system_score_codex":0.0000066660946,"about_ca_system_score_gemma":0.000026240203,"threshold_uncertainty_score":0.4475252},"labels":[],"label_agreement":null},{"id":"W1579963965","doi":"10.1016/j.molcel.2010.06.027","title":"Structure of the Endonuclease Domain of MutL: Unlicensed to Cut","year":2010,"lang":"en","type":"book-chapter","venue":"Molecular Cell","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of General Medical Sciences; National Cancer Institute; Howard Hughes Medical Institute","keywords":"Proofreading; DNA mismatch repair; Endonuclease; Processivity; Biology; DNA repair; DNA replication; Genetics; Polymerase; Cell biology; DNA; Computational biology","score_opus":0.005221271323566037,"score_gpt":0.2085616447826436,"score_spread":0.20334037345907757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1579963965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6411631,0.0005046199,0.00014577535,0.00029105006,0.00080439355,0.0014367963,0.0002634843,0.000020709645,0.35537007],"genre_scores_gemma":[0.95477587,0.000010684174,0.0041088997,0.0008853666,0.00008494775,0.0000036353586,0.000019984409,0.00011998242,0.039990623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985595,0.000021418096,0.00034784534,0.00032900213,0.00055520725,0.00018707222],"domain_scores_gemma":[0.99832684,0.0000279352,0.00026226026,0.0010570043,0.00017889858,0.00014707739],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004909495,0.0002991911,0.00050969707,0.000107381486,0.000021291444,0.0000036600827,0.00030959636,0.00047512076,0.0015156545],"category_scores_gemma":[0.000043378754,0.00022148868,0.00032158714,0.000055962384,0.00018752184,0.0000043057385,0.00017972723,0.00060897064,0.00001835712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013342245,0.00002014574,0.0000329594,0.0002525842,0.000068184614,0.000043458913,0.00020046663,0.000013674196,0.9974486,0.00086531736,0.00051159976,0.00040956],"study_design_scores_gemma":[0.0006229819,0.00026245607,0.00013595229,0.00017607836,0.00023555684,0.000015906277,0.000008882291,0.0000012436674,0.89518213,0.0021305373,0.101048805,0.00017949095],"about_ca_topic_score_codex":0.000029040657,"about_ca_topic_score_gemma":0.00004565538,"teacher_disagreement_score":0.31537944,"about_ca_system_score_codex":0.00005666377,"about_ca_system_score_gemma":0.00022480566,"threshold_uncertainty_score":0.9993971},"labels":[],"label_agreement":null},{"id":"W1708926971","doi":"10.1016/j.molcel.2015.07.001","title":"Tailoring MicroRNA Function: The Role of Uridylation in Antagonizing Mirtron Expression","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Biology; microRNA; Function (biology); Expression (computer science); Cell biology; Computational biology; Genetics; Gene; Computer science","score_opus":0.008816657972286233,"score_gpt":0.21383485672241326,"score_spread":0.20501819875012703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1708926971","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98976344,0.00463974,0.0035022828,0.00004473391,0.00008859078,0.0001757063,0.0000026975767,0.000006856582,0.0017759706],"genre_scores_gemma":[0.99927443,0.000013265569,0.00044141957,0.000038950133,0.0000713193,0.000012697074,0.00007053675,0.000018342598,0.00005903023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923533,0.00008467954,0.00018849978,0.0002087797,0.00014066786,0.00014201562],"domain_scores_gemma":[0.9994658,0.00000414345,0.00010469295,0.00030696444,0.0000684455,0.000049917657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000183498,0.000101909594,0.000081553146,0.000044843728,0.000028160968,0.000012327549,0.00012260678,0.00008829848,0.0000057156385],"category_scores_gemma":[0.000025052323,0.0000884592,0.00005866783,0.00010259164,0.00003152888,0.000005979908,0.00008573687,0.000062240324,0.0000067072665],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008960419,0.000038386213,0.0034862824,0.000011026938,0.000005861627,0.0000017731957,0.000071518385,0.0013693676,0.99376893,0.000019166084,0.00012588032,0.0010121955],"study_design_scores_gemma":[0.00044436904,0.00006374346,0.0018257268,0.000016891077,0.00001216587,0.0000018537876,0.00018457865,0.00026040353,0.9799828,0.00021445873,0.016897364,0.000095638636],"about_ca_topic_score_codex":0.000018819377,"about_ca_topic_score_gemma":0.0000050603303,"teacher_disagreement_score":0.016771482,"about_ca_system_score_codex":0.000025142988,"about_ca_system_score_gemma":0.000055056877,"threshold_uncertainty_score":0.36072615},"labels":[],"label_agreement":null},{"id":"W1891795013","doi":"10.1016/j.molcel.2015.08.005","title":"Analysis of the Histone H3.1 Interactome: A Suitable Chaperone for the Right Event","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto; Lunenfeld-Tanenbaum Research Institute","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Howard Hughes Medical Institute; U.S. Public Health Service; Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Biology; Helicase; Chromatin; Chaperone (clinical); Histone; Histone H2A; Histone code; Cell biology; Histone H3; Protein subunit; Proteome; Interactome; Histone H1; Histone methyltransferase; Genetics; Biochemistry; Nucleosome; DNA; RNA","score_opus":0.011108100710905894,"score_gpt":0.2757122722417103,"score_spread":0.2646041715308044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1891795013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9269679,0.0076055364,0.06271114,0.0003234394,0.00022242728,0.00034287313,0.000028152152,0.00000358671,0.001794936],"genre_scores_gemma":[0.997431,0.00005803298,0.00031779113,0.00013954355,0.000036678328,0.000032851298,0.000070939604,0.00001463811,0.001898556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992186,0.000067775116,0.00019430277,0.00019959414,0.00016591269,0.00015381127],"domain_scores_gemma":[0.9991181,0.000025135929,0.00012828945,0.0005267369,0.0001520746,0.000049669183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035068762,0.00010096661,0.0001395224,0.000044899098,0.000057916775,0.000012813425,0.0002695082,0.00007874947,0.000015993484],"category_scores_gemma":[0.00008955181,0.000061924846,0.00025758552,0.00024290952,0.000054992346,0.0000016498428,0.00011246643,0.000053137668,0.0000018612122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038674647,0.00008142043,0.0009883996,0.0000097550965,0.00029575484,5.558301e-7,0.00013900183,0.0063069644,0.9909492,0.00009308374,0.00040591758,0.0006912819],"study_design_scores_gemma":[0.00035250996,0.00012521032,0.001218495,0.0000027381063,0.00046778942,2.2464936e-7,0.000044245462,0.0029953413,0.9010201,0.0000929617,0.09358478,0.00009561751],"about_ca_topic_score_codex":0.000042266107,"about_ca_topic_score_gemma":0.00005806002,"teacher_disagreement_score":0.09317886,"about_ca_system_score_codex":0.000020352294,"about_ca_system_score_gemma":0.000056282945,"threshold_uncertainty_score":0.2525222},"labels":[],"label_agreement":null},{"id":"W1935831932","doi":"10.1016/j.molcel.2015.08.001","title":"MAPL SUMOylation of Drp1 Stabilizes an ER/Mitochondrial Platform Required for Cell Death","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":320,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; SUMO protein; Cell biology; Cytochrome c; Mitochondrial fission; Apoptosis; Mitochondrion; Mitochondrial apoptosis-induced channel; Programmed cell death; Bcl-2-associated X protein; Biochemistry; Ubiquitin; Caspase 3","score_opus":0.033730157810099935,"score_gpt":0.2679723612306374,"score_spread":0.23424220342053745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1935831932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8771704,0.00036469367,0.11328356,0.00003177362,0.0011197925,0.00066266657,0.000068240435,0.000024744826,0.007274123],"genre_scores_gemma":[0.9739295,0.000018504803,0.02244656,0.00019803566,0.00047511392,0.0000694382,0.0010233888,0.00005576255,0.0017836845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864364,0.00009189071,0.00034113592,0.00045603604,0.00018345106,0.0002838308],"domain_scores_gemma":[0.9988505,0.000015185756,0.00016861921,0.0005306585,0.00024406692,0.0001909675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002050689,0.00020375,0.0002293008,0.00006821082,0.000049059032,0.000019731115,0.00017286671,0.00030028733,0.000032989064],"category_scores_gemma":[0.00010340941,0.0002054923,0.00016047058,0.000077381126,0.00005488362,0.000010852627,0.000065489745,0.000073996,0.000014799118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000759587,0.00015840612,0.0002464696,0.000037570888,0.0000125935885,0.0000054094553,0.00013335688,0.0002260253,0.9956685,0.00026393714,0.002258371,0.00022978001],"study_design_scores_gemma":[0.0026504279,0.0017396316,0.000021554459,0.00000388316,0.000040682626,0.0000062153254,0.00014714814,0.00026317037,0.95423317,0.0006367882,0.040020704,0.00023661504],"about_ca_topic_score_codex":0.000025043628,"about_ca_topic_score_gemma":0.000023847075,"teacher_disagreement_score":0.0967591,"about_ca_system_score_codex":0.000020320607,"about_ca_system_score_gemma":0.00015954093,"threshold_uncertainty_score":0.8379733},"labels":[],"label_agreement":null},{"id":"W1938908576","doi":"10.1016/j.molcel.2015.09.006","title":"Residue-by-Residue View of In Vitro FUS Granules that Bind the C-Terminal Domain of RNA Polymerase II","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":993,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children; National Center for Research Resources; National Institute of General Medical Sciences; McKnight Foundation; Office of Experimental Program to Stimulate Competitive Research; National Science Foundation; National Institutes of Health; Brown University","keywords":"Ribonucleoprotein; Intrinsically disordered proteins; Biophysics; Biology; RNA; Stress granule; RNA-binding protein; Ribonucleoprotein particle; Messenger RNP; Polymerase; Residue (chemistry); Cell biology; RNA polymerase; Biochemistry; Crystallography; Messenger RNA; Chemistry; Gene","score_opus":0.011975890913954176,"score_gpt":0.24881760407658884,"score_spread":0.23684171316263467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1938908576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874786,0.009999602,0.00046860852,0.0002506151,0.000029901556,0.00022824449,0.00003664253,0.000002956507,0.001504788],"genre_scores_gemma":[0.9984314,0.00020069547,0.00035200524,0.00014765699,0.00002439497,0.000015170802,0.000065566506,0.000022716153,0.00074038835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855655,0.00022847009,0.00027338273,0.00027353712,0.0003360752,0.00033200963],"domain_scores_gemma":[0.9991534,0.000016067866,0.00011936219,0.0005120512,0.00006772466,0.00013141877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047368277,0.00016383319,0.00023594873,0.00007218231,0.000047056543,0.00001222587,0.0003891437,0.00011984869,0.0000089119185],"category_scores_gemma":[0.00004726457,0.000125016,0.00012100944,0.00015089486,0.00017479528,0.0000041003095,0.00021481985,0.00013533981,0.0000028548675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032061888,0.000114432725,0.00036980037,0.000049483504,0.0000199306,0.00007398831,0.00009049847,0.000013789719,0.99598545,0.000016500291,0.0010383123,0.0019071874],"study_design_scores_gemma":[0.001048704,0.0003119304,0.00014622213,0.000025951578,0.000011362463,0.000010996123,0.00016292522,0.000020551104,0.9953194,0.00010529364,0.002707563,0.00012909374],"about_ca_topic_score_codex":0.0005331706,"about_ca_topic_score_gemma":0.00006871677,"teacher_disagreement_score":0.010952764,"about_ca_system_score_codex":0.000013392204,"about_ca_system_score_gemma":0.00013738828,"threshold_uncertainty_score":0.50980043},"labels":[],"label_agreement":null},{"id":"W1951559178","doi":"10.1016/j.molcel.2015.09.002","title":"EGFR Mutation Promotes Glioblastoma through Epigenome and Transcription Factor Network Remodeling","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":185,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mental Health Research Canada; Hospital for Sick Children; University Health Network","funders":"National Center for Research Resources; National Institute of Neurological Disorders and Stroke; National Cancer Institute","keywords":"Biology; Epigenome; Epigenetics; Transcription factor; Cancer research; Epidermal growth factor receptor; Bromodomain; Carcinogenesis; Transcriptome; Enhancer; Genetics; Mutation; DNA methylation; Gene; Gene expression; Cancer","score_opus":0.016435948382558727,"score_gpt":0.23310483415598882,"score_spread":0.21666888577343008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1951559178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8848808,0.0026688485,0.110290915,0.00019383557,0.00016251585,0.00029445445,0.000006626027,0.000029633164,0.001472388],"genre_scores_gemma":[0.9933971,0.000061666484,0.0056001116,0.00029658564,0.000165109,0.000015281239,0.000097864184,0.000027667764,0.00033857208],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990835,0.000074549826,0.00017862619,0.00030778194,0.00014632774,0.00020921684],"domain_scores_gemma":[0.9995495,0.0000024678354,0.000064934124,0.00019369107,0.00008792363,0.000101492304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119530305,0.0001472166,0.000104417304,0.000023265933,0.00006237918,0.000039847637,0.00007975024,0.00013623488,0.0000072635935],"category_scores_gemma":[0.000030178067,0.00013387753,0.000054732915,0.00008668333,0.000038171816,0.000012603387,0.000035055775,0.000073528965,0.000011835546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006303028,0.000030536386,0.00009119296,0.000018041072,0.000012382524,0.000007941833,0.00023731522,0.0008320591,0.99515975,0.00006905104,0.00038171755,0.003097004],"study_design_scores_gemma":[0.0006519089,0.00041729587,0.000038882765,0.0000121696285,0.000013887389,0.000009813201,0.000074454954,0.00073725043,0.9684397,0.0008812851,0.028504523,0.00021881444],"about_ca_topic_score_codex":0.000014113661,"about_ca_topic_score_gemma":0.000008227525,"teacher_disagreement_score":0.10851636,"about_ca_system_score_codex":0.000017882474,"about_ca_system_score_gemma":0.000047244663,"threshold_uncertainty_score":0.5459367},"labels":[],"label_agreement":null},{"id":"W1964362163","doi":"10.1016/j.molcel.2012.05.037","title":"Tissue-Specific Alternative Splicing Remodels Protein-Protein Interaction Networks","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":459,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Exon; Biology; Alternative splicing; RNA splicing; Dynamin; Protein–protein interaction; Computational biology; Cell biology; Genetics; Endocytosis; Gene; Receptor","score_opus":0.01571470113485828,"score_gpt":0.2710984037927223,"score_spread":0.25538370265786403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964362163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7844198,0.0018258736,0.207542,0.00005221102,0.00012096226,0.0004790529,0.0000020240263,0.000017547454,0.0055405265],"genre_scores_gemma":[0.99247545,0.00006553354,0.0022302254,0.00012009889,0.00047996984,0.00007157255,0.00006481765,0.000052883915,0.00443946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984311,0.00013688301,0.0002123663,0.00037105157,0.00023691975,0.0006116788],"domain_scores_gemma":[0.99914145,0.000005539809,0.00009540182,0.00045454557,0.00008317379,0.00021990089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028789882,0.00021077755,0.00014894827,0.0000655922,0.00010568001,0.00005474788,0.0002328252,0.00014737884,0.000046801833],"category_scores_gemma":[0.00002580226,0.00020906169,0.000097153425,0.00011460689,0.00004277345,0.000016819635,0.00017135497,0.00025285597,0.00007395269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007711982,0.0000690079,0.00004983635,0.000015431244,0.00002219083,0.000016930217,0.00003321369,0.0012938044,0.99135816,0.00023634158,0.00030470788,0.006523282],"study_design_scores_gemma":[0.0003439112,0.00017456709,0.000026048676,0.00003450076,0.0000054113148,0.000009375071,0.000046364206,0.0019204044,0.9677436,0.00004360311,0.029416164,0.00023604436],"about_ca_topic_score_codex":0.00006587191,"about_ca_topic_score_gemma":0.0000042096126,"teacher_disagreement_score":0.20805565,"about_ca_system_score_codex":0.000045485245,"about_ca_system_score_gemma":0.000021676395,"threshold_uncertainty_score":0.85252887},"labels":[],"label_agreement":null},{"id":"W1965466808","doi":"10.1016/j.molcel.2005.05.012","title":"Binding of pRB to the PHD Protein RBP2 Promotes Cellular Differentiation","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":242,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; E2F; Transcription factor; Cell biology; Retinoblastoma protein; Chromatin; Pioneer factor; Forkhead Transcription Factors; Chromatin immunoprecipitation; Promoter; Genetics; Chromatin remodeling; Gene; Gene expression; Cell cycle","score_opus":0.007227782632790802,"score_gpt":0.20508986483810587,"score_spread":0.19786208220531507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965466808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.973899,0.00038446457,0.022443786,0.00083719415,0.000057651952,0.00072434254,0.000008756772,0.000012855318,0.0016319561],"genre_scores_gemma":[0.995604,0.000005481548,0.002021922,0.00020353225,0.00013571537,0.00006877582,0.000090960544,0.00002322798,0.0018464081],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907285,0.00007867855,0.00021350155,0.00025605812,0.000191453,0.0001874334],"domain_scores_gemma":[0.99938047,0.0000026646999,0.00010333907,0.00038343307,0.000066807836,0.00006329015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015805481,0.0001345639,0.00009973615,0.000051432562,0.00006544331,0.000024248482,0.00022684876,0.00009041625,0.000037608435],"category_scores_gemma":[0.000052699434,0.00010506368,0.000093658644,0.000129971,0.000028514003,0.000004327949,0.000103819344,0.00007244426,0.000053028492],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001459988,0.000070924536,0.000066713634,0.00001875186,0.00001265096,7.9770615e-7,0.00005199407,0.000066777255,0.9960636,0.000084286476,0.00063229824,0.0029166134],"study_design_scores_gemma":[0.00023393231,0.00014213464,0.000048998547,0.000014876511,0.000010501673,6.452925e-7,0.000019538447,0.00011288315,0.95268387,0.000017317252,0.046588406,0.0001268707],"about_ca_topic_score_codex":0.000006853171,"about_ca_topic_score_gemma":0.000007009463,"teacher_disagreement_score":0.04595611,"about_ca_system_score_codex":0.000013202133,"about_ca_system_score_gemma":0.000032473425,"threshold_uncertainty_score":0.42843723},"labels":[],"label_agreement":null},{"id":"W1968263458","doi":"10.1016/j.molcel.2014.01.026","title":"Fold Change of Nuclear NF-κB Determines TNF-Induced Transcription in Single Cells","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":248,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health; DeGregorio Family Foundation","keywords":"Biology; Transcription factor; Cell nucleus; NF-κB; Transcription (linguistics); Cell biology; NFKB1; Gene expression; Tumor necrosis factor alpha; Nucleus; Gene; Molecular biology; Signal transduction; Genetics; Immunology","score_opus":0.020295920678055242,"score_gpt":0.20874289869517398,"score_spread":0.18844697801711874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968263458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957377,0.00024242238,0.0011599294,0.000049152914,0.00017495717,0.00023039122,0.000008244797,0.000016895132,0.0023803208],"genre_scores_gemma":[0.9983469,0.00001520799,0.00095029926,0.00040218778,0.000098676755,0.000016036001,0.000035272118,0.000056554025,0.00007886216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880683,0.00011462718,0.000266908,0.000375257,0.00015697099,0.00027942902],"domain_scores_gemma":[0.99934685,0.00000699432,0.00010376535,0.00041863526,0.000053080854,0.00007068664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018637691,0.00019206788,0.00020835658,0.00008899091,0.000025054047,0.000014483556,0.00022423401,0.00021327144,0.000017118762],"category_scores_gemma":[0.00002127555,0.0002109062,0.00013881137,0.00011333773,0.000038386872,0.0000051149673,0.000054005122,0.00008949899,0.00001886351],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034473305,0.0001545481,0.00009331731,0.00006315879,0.000007954436,0.000011113175,0.00016225847,0.00002797968,0.99758464,0.000029921566,0.00006147474,0.001769159],"study_design_scores_gemma":[0.0006775079,0.0005087198,0.0001197014,0.000030245903,0.000018332104,0.0000021043445,0.000024545108,0.0001509665,0.99093693,0.000041943276,0.0072643463,0.00022464232],"about_ca_topic_score_codex":0.00006037978,"about_ca_topic_score_gemma":0.000036542642,"teacher_disagreement_score":0.0072028716,"about_ca_system_score_codex":0.000014675423,"about_ca_system_score_gemma":0.000015459025,"threshold_uncertainty_score":0.86005056},"labels":[],"label_agreement":null},{"id":"W1968345969","doi":"10.1016/j.molcel.2012.04.021","title":"The Stat3/GR Interaction Code: Predictive Value of Direct/Indirect DNA Recruitment for Transcription Outcome","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":198,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Université de Montréal; McGill University","keywords":"Biology; Repressor; Psychological repression; Transcription (linguistics); DNA; Transcription factor; Gene; Transcriptional regulation; Genetics; STAT3; Genome; Computational biology; Cell biology; Gene expression","score_opus":0.0697560385352603,"score_gpt":0.33619312213802366,"score_spread":0.26643708360276336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968345969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9185962,0.0016812307,0.05110007,0.0008305426,0.0022771975,0.0029868064,0.00020216845,0.00010979092,0.022216009],"genre_scores_gemma":[0.9976884,0.000057351786,0.0006551367,0.0001563556,0.00012467193,0.00025085115,0.00007574502,0.0000318839,0.00095961627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892044,0.00008050418,0.00036030635,0.0001674381,0.00021334762,0.00025796695],"domain_scores_gemma":[0.9992255,0.00013919735,0.00015623173,0.0002458787,0.00013460642,0.00009860325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036393446,0.00014005152,0.00023134664,0.00007517134,0.00011373821,0.000014940716,0.00006171382,0.000060635204,0.000045952587],"category_scores_gemma":[0.000086280656,0.00010100201,0.00026367992,0.000099526886,0.0000372476,0.000099550205,0.000012387747,0.00015553138,0.000011596762],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005555065,0.000440981,0.0010251377,0.00011092004,0.00015381024,0.0000022461747,0.0009768107,0.000121977784,0.991724,0.00028622523,0.0010472487,0.0035551426],"study_design_scores_gemma":[0.0008467919,0.0006286378,0.0015143786,0.000063437,0.00035916045,0.000008828051,0.00034774808,0.001180963,0.8566148,0.00003321862,0.13830802,0.00009400272],"about_ca_topic_score_codex":0.000026801925,"about_ca_topic_score_gemma":0.000004866868,"teacher_disagreement_score":0.13726076,"about_ca_system_score_codex":0.00013669206,"about_ca_system_score_gemma":0.000035382924,"threshold_uncertainty_score":0.41187423},"labels":[],"label_agreement":null},{"id":"W1969119726","doi":"10.1016/j.molcel.2013.12.025","title":"Dimeric Structure of Pseudokinase RNase L Bound to 2-5A Reveals a Basis for Interferon-Induced Antiviral Activity","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":148,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; Lunenfeld-Tanenbaum Research Institute; McMaster University; University of Toronto; Mount Sinai Hospital","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; Canadian Institutes of Health Research; Centers for Disease Control and Prevention; National Institute of General Medical Sciences; Wellcome Trust","keywords":"Biology; Interferon; RNase P; Cell biology; Virology; Genetics; RNA; Gene","score_opus":0.008571037002968043,"score_gpt":0.24451676509652512,"score_spread":0.23594572809355707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969119726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932794,0.00014355137,0.004347559,0.00010928838,0.00085169857,0.00046428887,0.000069979214,0.000028575516,0.00070566585],"genre_scores_gemma":[0.9972124,0.0000016071625,0.00026717337,0.00038454516,0.000013759016,0.000015118003,0.000016207872,0.0000358567,0.0020533337],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854696,0.00039114125,0.00026229874,0.00036510066,0.000044247787,0.0003902611],"domain_scores_gemma":[0.9990961,0.000094029405,0.00015647724,0.00052991917,0.00008934682,0.000034155044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013368201,0.00024535676,0.0004252864,0.00014777324,0.000091065885,0.0000144714595,0.00031564862,0.00024795815,0.00013866375],"category_scores_gemma":[0.00024856412,0.00022744307,0.00025698842,0.00015663168,0.00008688563,0.00005247349,0.00016976331,0.0002140808,0.00006227793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011487141,0.0001348742,0.000081271,0.00007378632,0.000069466405,0.0000019666531,0.0001722275,0.0000021303247,0.9934846,0.00009361109,0.00087336823,0.0038639687],"study_design_scores_gemma":[0.0010627757,0.0011264421,0.000986922,0.00007031042,0.000054259293,0.0000081779845,0.000028748824,0.0000060084903,0.9916074,0.00006799354,0.0047407253,0.00024019167],"about_ca_topic_score_codex":0.000067559005,"about_ca_topic_score_gemma":0.000009299497,"teacher_disagreement_score":0.004080386,"about_ca_system_score_codex":0.000048258324,"about_ca_system_score_gemma":0.000058861828,"threshold_uncertainty_score":0.92748594},"labels":[],"label_agreement":null},{"id":"W1969228261","doi":"10.1016/j.molcel.2008.11.020","title":"A Library of Yeast Transcription Factor Motifs Reveals a Widespread Function for Rsc3 in Targeting Nucleosome Exclusion at Promoters","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":494,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"U.S. National Library of Medicine; National Institutes of Health; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Canadian Institutes of Health Research; Genome Canada; Ontario Genomics; National Institute of General Medical Sciences; Ontario Genomics Institute; American Heart Association; U.S. Department of Agriculture","keywords":"Biology; Promoter; Nucleosome; Transcription factor; Genetics; Yeast; Function (biology); Computational biology; DNA; Histone; Gene; Gene expression","score_opus":0.014050769236723938,"score_gpt":0.22390606467510718,"score_spread":0.20985529543838324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969228261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99429756,0.0010101115,0.0032742678,0.000060518076,0.00008958782,0.0005391215,0.000069949696,0.00001168507,0.0006471794],"genre_scores_gemma":[0.996479,0.00016047587,0.0015648996,0.000079629644,0.000054991913,0.000041673542,0.00027861053,0.000044790093,0.001295958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880993,0.00008341354,0.0002667172,0.00036366953,0.00019084782,0.00028543573],"domain_scores_gemma":[0.99955606,0.000008268352,0.00007548686,0.00022281069,0.00005198285,0.000085396765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009636038,0.00014962061,0.00016262142,0.000093534894,0.00006931924,0.000009148168,0.00015052498,0.00016216209,0.000043982356],"category_scores_gemma":[0.00003290861,0.00015224562,0.00014616917,0.00013241188,0.000057532186,0.000009036201,0.000111876645,0.00008250311,0.0000078287785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043536437,0.0001267968,0.0020116798,0.00015091232,0.000013823941,0.000010805947,0.0001779931,0.00017787867,0.9958756,0.000005097344,0.0005115634,0.0005025156],"study_design_scores_gemma":[0.00087978656,0.000530063,0.0029546549,0.000031665815,0.000007884836,0.0000048362176,0.00002496513,0.00036358592,0.9916935,0.000079650796,0.0032702486,0.00015918742],"about_ca_topic_score_codex":0.0000109223265,"about_ca_topic_score_gemma":0.0000033949045,"teacher_disagreement_score":0.004182098,"about_ca_system_score_codex":0.000018811856,"about_ca_system_score_gemma":0.000051852858,"threshold_uncertainty_score":0.6208396},"labels":[],"label_agreement":null},{"id":"W1969296875","doi":"10.1016/j.molcel.2007.04.016","title":"RNA Helicase A Interacts with RISC in Human Cells and Functions in RISC Loading","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":220,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Ontario HIV Treatment Network","keywords":"RNA-induced silencing complex; Biology; Dicer; Argonaute; RNA interference; RNA silencing; RNA; RNA Helicase A; Trans-acting siRNA; Gene silencing; Small interfering RNA; Cell biology; Molecular biology; Helicase; Gene; Genetics","score_opus":0.005961392000084135,"score_gpt":0.23177478130769683,"score_spread":0.2258133893076127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969296875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98759556,0.00045486618,0.0030760823,0.000023893379,0.00004617589,0.00013941342,0.00000492231,0.000005729923,0.008653385],"genre_scores_gemma":[0.9983371,0.00003296281,0.00026712217,0.00026044538,0.000032661428,0.000009090097,0.000036526704,0.00001984651,0.0010042628],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904233,0.00003568385,0.00020619403,0.00035139732,0.000081344886,0.0002830562],"domain_scores_gemma":[0.9995925,0.000008254451,0.000051200626,0.00023481691,0.000031473126,0.0000817777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017741893,0.00015191881,0.00012676477,0.00014610913,0.000036047797,0.000027485898,0.000101414786,0.000108012646,0.000026076426],"category_scores_gemma":[0.000008931785,0.00014474012,0.00003993466,0.00013322924,0.000045573048,0.000005886712,0.00007914817,0.0001568889,0.000029051535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087740314,0.00009334999,0.0024002488,0.000013641342,0.000010099551,0.0002883327,0.00007587226,0.000116707466,0.99614173,0.0000036988226,0.00030534153,0.00046321613],"study_design_scores_gemma":[0.00075506495,0.00036419937,0.0013141369,0.000039897703,0.00000923866,0.000016958358,0.000249312,0.000038345097,0.99359906,0.000016464981,0.003402415,0.00019492915],"about_ca_topic_score_codex":0.00014404129,"about_ca_topic_score_gemma":0.00080598734,"teacher_disagreement_score":0.0107415505,"about_ca_system_score_codex":0.000019350266,"about_ca_system_score_gemma":0.000021306127,"threshold_uncertainty_score":0.5902331},"labels":[],"label_agreement":null},{"id":"W1969504098","doi":"10.1016/s1097-2765(02)00453-7","title":"Association of CBP/p300 Acetylase and Thymine DNA Glycosylase Links DNA Repair and Transcription","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":279,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biology; DNA glycosylase; DNA repair; Chromatin; Acetylation; Histone; Base excision repair; Chromatin remodeling; Cell biology; DNA; Molecular biology; Genetics; Gene","score_opus":0.005384057719897332,"score_gpt":0.18854295852790753,"score_spread":0.1831589008080102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969504098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946585,0.0020948634,0.000991037,0.00025374885,0.00007402837,0.00022366224,0.000023978182,0.000034194687,0.0016459455],"genre_scores_gemma":[0.9950236,0.0005541526,0.0012751399,0.00026651466,0.00004345785,0.000013041185,0.000052877618,0.000030723462,0.002740461],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988865,0.00009494061,0.00023199855,0.00038610995,0.00018383854,0.00021657342],"domain_scores_gemma":[0.99939096,0.000010273739,0.00012914024,0.0002984922,0.000068856425,0.000102282625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022038275,0.00017352712,0.00017950694,0.000051104813,0.000044035896,0.000016782149,0.000075383075,0.0003661966,0.000037819496],"category_scores_gemma":[0.000068849164,0.0001862237,0.00011611641,0.00007672489,0.000039442093,0.0000066580133,0.00005767129,0.00012542878,0.0000062741556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032756292,0.00009971317,0.00034518997,0.00007318563,0.00005171133,0.000014297413,0.000094340576,0.0000055138607,0.9973151,0.000032049145,0.00092510134,0.0010110193],"study_design_scores_gemma":[0.0010408222,0.00041648725,0.0002677506,0.000014009186,0.000087370754,0.00000958391,0.000026438285,0.00072796637,0.9872292,0.0000623198,0.009924584,0.00019346278],"about_ca_topic_score_codex":0.000007790384,"about_ca_topic_score_gemma":0.000014847399,"teacher_disagreement_score":0.010085917,"about_ca_system_score_codex":0.000019847017,"about_ca_system_score_gemma":0.000011037695,"threshold_uncertainty_score":0.75939816},"labels":[],"label_agreement":null},{"id":"W1971638490","doi":"10.1016/s1097-2765(01)00254-4","title":"Identification of RFC(Ctf18p, Ctf8p, Dcc1p)","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":325,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pacific Centre for Reproductive Medicine; University of British Columbia","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Cancer Institute","keywords":"Establishment of sister chromatid cohesion; Biology; Sister chromatids; Genetics; Chromatid; Chromatin; Kinetochore; Cell biology; DNA replication; Chromosome; DNA; Gene","score_opus":0.0032861897786980315,"score_gpt":0.20009207262985884,"score_spread":0.1968058828511608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971638490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97169983,0.0005871141,0.021051634,0.000052582167,0.000099784505,0.00011767074,0.000011595088,0.000007945962,0.0063718534],"genre_scores_gemma":[0.99724853,0.00020283008,0.0007381358,0.00010996573,0.00004098041,0.0000084572985,0.000116779076,0.000025891175,0.0015084099],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991691,0.00002937335,0.00026644056,0.00025139836,0.000114148716,0.00016951299],"domain_scores_gemma":[0.99926716,0.0000026516154,0.00013846911,0.00046315815,0.00007721836,0.000051366034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119947144,0.000116047406,0.000108638924,0.000036551373,0.000033248623,0.000016157908,0.00021470533,0.00011173704,0.000022633543],"category_scores_gemma":[0.000017003926,0.000126939,0.00010385254,0.00008866837,0.00004268732,0.0000017256192,0.00007778783,0.000048191396,0.000027225919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012825195,0.0000696228,0.000687087,0.000019709005,0.000016667163,0.000007126988,0.000020100128,0.00048505215,0.9974611,0.0001594002,0.00026346854,0.0007978444],"study_design_scores_gemma":[0.0003255223,0.00008769268,0.00074247905,0.000003676393,0.000020330892,0.000009773929,0.000039647515,0.0010357549,0.983882,0.00027089324,0.0134219285,0.00016028836],"about_ca_topic_score_codex":0.000008708372,"about_ca_topic_score_gemma":0.0000053274775,"teacher_disagreement_score":0.02554873,"about_ca_system_score_codex":0.000009534762,"about_ca_system_score_gemma":0.000033332104,"threshold_uncertainty_score":0.51764226},"labels":[],"label_agreement":null},{"id":"W1973089523","doi":"10.1016/j.molcel.2012.04.015","title":"STT3B-Dependent Posttranslational N-Glycosylation as a Surveillance System for Secretory Protein","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Galectins and Cancer Biology","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Japan Society for the Promotion of Science; Fukushima University; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Endoplasmic-reticulum-associated protein degradation; Glycosylation; Endoplasmic reticulum; Biology; Proteostasis; N-linked glycosylation; Secretory pathway; Glycoprotein; Cell biology; Glycan; Furin; Calnexin; Unfolded protein response; Protein folding; Biochemistry; Golgi apparatus; Calreticulin","score_opus":0.007513446855812347,"score_gpt":0.21847212509671532,"score_spread":0.21095867824090297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973089523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96703494,0.007158006,0.01625577,0.0001049857,0.0008664969,0.0008624554,0.000078721016,0.00008936525,0.007549257],"genre_scores_gemma":[0.99773854,0.0000036770953,0.00020154228,0.000084241605,0.00006495398,0.00016585451,0.0002943412,0.000021102158,0.0014257472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990266,0.00016645805,0.00018713104,0.0002165724,0.000037581645,0.00036565954],"domain_scores_gemma":[0.9995994,0.000035136378,0.00009179318,0.00017232612,0.00007269824,0.0000286581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028328286,0.00013649881,0.00016471127,0.000048431786,0.00011222828,0.0000074491354,0.00010415688,0.0002213231,0.00019274569],"category_scores_gemma":[0.000014578137,0.0001302328,0.00009350664,0.000054398548,0.00003979366,0.000042637017,0.000019727513,0.00012154784,0.00030919342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016646391,0.0000603453,0.002473953,0.00006956253,0.00005008058,0.000001585765,0.00011973444,0.000012599254,0.9934799,0.002528398,0.0001284151,0.00090894307],"study_design_scores_gemma":[0.0015872276,0.00026808423,0.0035251395,0.000016528478,0.00002564826,0.000048783197,0.00009120889,0.000011142574,0.92744035,0.00009474539,0.06663647,0.0002546836],"about_ca_topic_score_codex":0.00007065686,"about_ca_topic_score_gemma":0.000013260868,"teacher_disagreement_score":0.06650806,"about_ca_system_score_codex":0.000064427346,"about_ca_system_score_gemma":0.00006062766,"threshold_uncertainty_score":0.5310739},"labels":[],"label_agreement":null},{"id":"W1973679647","doi":"10.1016/j.molcel.2014.02.028","title":"Largen: A Molecular Regulator of Mammalian Cell Size Control","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University Health Network; Jewish General Hospital; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; Agence Nationale pour la Gestion des Déchets Radioactifs","keywords":"Biology; Cell biology; Mitochondrion; Translation (biology); Cell; Gene; Regulator; Transgene; Messenger RNA; Cell growth; Molecular biology; Genetics","score_opus":0.001669692121390535,"score_gpt":0.21151912193456113,"score_spread":0.2098494298131706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973679647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7714959,0.0017597608,0.21814756,0.00008954492,0.0001463725,0.00024399752,0.000018324681,0.000021409023,0.0080771595],"genre_scores_gemma":[0.99371654,0.00001907212,0.004747746,0.00042699737,0.00007930495,0.000018594854,0.00003115482,0.000065523476,0.0008950515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857557,0.00009099977,0.00030482133,0.00043005173,0.0002182279,0.00038033572],"domain_scores_gemma":[0.9989155,0.000015049418,0.00008664169,0.0007235251,0.00009965072,0.00015966683],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021614041,0.00025741747,0.00026598325,0.000045189117,0.00003306517,0.000015977925,0.00029077454,0.0002025481,0.00004838452],"category_scores_gemma":[0.00007761157,0.00027661875,0.00024117748,0.00010505176,0.00005521757,0.0000019851789,0.00008821171,0.00010079074,0.000020529202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003368375,0.00007533534,0.00023791233,0.0000889704,0.00002812502,0.000013325673,0.000018428838,0.0041594715,0.9944983,0.00015667835,0.00036224537,0.0003275392],"study_design_scores_gemma":[0.001416462,0.00027976758,0.00030402504,0.000008481139,0.000054497013,0.000005218671,0.00001538046,0.0007065151,0.97133875,0.0000770315,0.025492106,0.00030179336],"about_ca_topic_score_codex":0.000011987839,"about_ca_topic_score_gemma":0.0000032194666,"teacher_disagreement_score":0.22222069,"about_ca_system_score_codex":0.000008073676,"about_ca_system_score_gemma":0.00004652541,"threshold_uncertainty_score":0.9999686},"labels":[],"label_agreement":null},{"id":"W1974545855","doi":"10.1016/s1097-2765(03)00014-5","title":"Ligand-Dependent Nuclear Receptor Corepressor LCoR Functions by Histone Deacetylase-Dependent and -Independent Mechanisms","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":251,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Lawson Health Research Institute; Western University; McGill University","funders":"","keywords":"Corepressor; Biology; Nuclear receptor; Coactivator; Histone deacetylase; Trichostatin A; Nuclear receptor coactivator 3; Histone deacetylase 5; Nuclear receptor coactivator 1; Repressor; HDAC10; Nuclear receptor co-repressor 1; HDAC11; Cell biology; Psychological repression; PELP-1; Biochemistry; Histone; Transcription factor; Gene expression","score_opus":0.003187049288155071,"score_gpt":0.19725089174043042,"score_spread":0.19406384245227534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974545855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96957785,0.009654026,0.011300839,0.00009543197,0.00043713194,0.00052908756,0.000052699266,0.00006916227,0.008283764],"genre_scores_gemma":[0.98942643,0.00069702993,0.0009484616,0.00037392636,0.000036725563,0.000046239413,0.00013605102,0.00010891253,0.008226226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99793375,0.00018524576,0.00028769753,0.0007860688,0.0003365716,0.00047069063],"domain_scores_gemma":[0.9989348,0.00001157743,0.0001311847,0.00054774905,0.00006820357,0.0003064698],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025654637,0.00035915914,0.00024974335,0.00006482939,0.00022065097,0.00006691821,0.00020040832,0.00043565157,0.00009193231],"category_scores_gemma":[0.00004726469,0.00035555972,0.00015808715,0.00009358665,0.000079139696,0.000007640957,0.00014404677,0.00031066747,0.00020794572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093537805,0.00024563153,0.000018888388,0.000017993258,0.000105100844,0.000049103503,0.000034997902,0.00006666541,0.99121016,0.00038346704,0.007467963,0.00030651354],"study_design_scores_gemma":[0.0016313354,0.0006203676,0.000007552437,0.000008328762,0.00010382785,0.00008703559,0.00011646675,0.000031897685,0.96085334,0.000088295485,0.03602052,0.00043103241],"about_ca_topic_score_codex":0.000025826399,"about_ca_topic_score_gemma":0.000002474967,"teacher_disagreement_score":0.030356798,"about_ca_system_score_codex":0.000053753072,"about_ca_system_score_gemma":0.000058224552,"threshold_uncertainty_score":0.9998896},"labels":[],"label_agreement":null},{"id":"W1974654938","doi":"10.1016/j.molcel.2005.04.015","title":"ATM-Dependent Phosphorylation of ATF2 Is Required for the DNA Damage Response","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":175,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; Consortium canadien en neurodégénérescence associée au vieillissement","keywords":"p38 mitogen-activated protein kinases; Phosphorylation; Radioresistance; Biology; DNA damage; Cell biology; DNA repair; G2-M DNA damage checkpoint; Activating transcription factor 2; Transcription factor; CHEK1; Protein kinase A; DNA; Cell cycle; Cell cycle checkpoint; Genetics; Apoptosis; Gene expression; Promoter; Cell culture; Gene","score_opus":0.008849540394344777,"score_gpt":0.23801656499321747,"score_spread":0.2291670245988727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974654938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.957871,0.0011336704,0.03870438,0.0005640934,0.000084691776,0.00052089215,0.000037696213,0.000015445183,0.0010681233],"genre_scores_gemma":[0.9911176,0.000037422004,0.004347237,0.0007790402,0.000060460265,0.00005159799,0.00004207452,0.00003864234,0.0035259295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99898195,0.000087199565,0.00022291363,0.00031071217,0.00018577932,0.00021141786],"domain_scores_gemma":[0.9990389,0.00003805303,0.0001206443,0.0006606541,0.000092710055,0.000049080514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047518127,0.00014364299,0.00011747073,0.000026469268,0.000064478656,0.000014981956,0.000268154,0.00013989437,0.000043101736],"category_scores_gemma":[0.00009251502,0.00012265283,0.00017765436,0.00006205935,0.000044540608,0.0000036546446,0.00010500819,0.00005048576,0.000017988601],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005847629,0.000058247228,0.000013043097,0.00001387432,0.000035661604,0.0000027044168,0.00008951331,0.00024338443,0.99586874,0.000073105206,0.00136664,0.0016502996],"study_design_scores_gemma":[0.0006826168,0.00027157512,0.00007163165,0.00000489165,0.00004039401,0.0000022461252,0.000054623673,0.001052835,0.9267355,0.00006869028,0.07088314,0.00013182231],"about_ca_topic_score_codex":0.0000066488774,"about_ca_topic_score_gemma":0.000005972395,"teacher_disagreement_score":0.069516495,"about_ca_system_score_codex":0.000021001046,"about_ca_system_score_gemma":0.00006074811,"threshold_uncertainty_score":0.50016373},"labels":[],"label_agreement":null},{"id":"W1974854199","doi":"10.1016/j.molcel.2010.04.001","title":"Flavonol Activation Defines an Unanticipated Ligand-Binding Site in the Kinase-RNase Domain of IRE1","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":189,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Environmental Health Sciences; Canadian Institutes of Health Research; Health Canada; Wellcome Trust","keywords":"Biology; Endoplasmic reticulum; Unfolded protein response; XBP1; Cell biology; RNase P; Biochemistry; Kinase; RNA splicing; RNA","score_opus":0.006036365266318059,"score_gpt":0.2360914632009371,"score_spread":0.23005509793461904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974854199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762434,0.00010391218,0.0003595946,0.00008077733,0.00006224279,0.00020505633,0.000023283126,0.000007090957,0.0015336903],"genre_scores_gemma":[0.99892986,0.000021548543,0.00045979157,0.0001832078,0.000041566713,0.00002378182,0.00028472987,0.00001996866,0.000035562538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990657,0.00009313569,0.00020620055,0.0002707865,0.00014961416,0.00021454085],"domain_scores_gemma":[0.9993119,0.0000136927265,0.00009954338,0.0004570842,0.00004719982,0.000070563015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001799439,0.00014648469,0.00012118824,0.000060280723,0.00005029231,0.000027652308,0.0002156894,0.00013091999,0.000009240307],"category_scores_gemma":[0.000060899296,0.000114755785,0.00008299039,0.00014102047,0.00006825581,0.0000063876296,0.000049757367,0.00013542142,0.0000073821766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000562108,0.00018926089,0.004719223,0.000027443806,0.000007026137,0.000033402044,0.00012774393,0.000085900756,0.9942631,0.00015504977,0.000072930365,0.00026270587],"study_design_scores_gemma":[0.00069408544,0.00011795847,0.0020311489,0.000014864206,0.000017912113,0.0000034424208,0.00013166919,0.0001145345,0.9954021,0.000108041575,0.0012155648,0.00014867728],"about_ca_topic_score_codex":0.00009390933,"about_ca_topic_score_gemma":0.00008190735,"teacher_disagreement_score":0.0026880738,"about_ca_system_score_codex":0.0000040782197,"about_ca_system_score_gemma":0.00004427297,"threshold_uncertainty_score":0.4679605},"labels":[],"label_agreement":null},{"id":"W1975146714","doi":"10.1016/j.molcel.2010.05.003","title":"The Diversity of Ubiquitin Recognition: Hot Spots and Varied Specificity","year":2010,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":159,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Ubiquitin; Biology; Computational biology; Ubiquitins; Function (biology); Ubiquitin-Protein Ligases; Ubiquitin ligase; Genetics; Cell biology; Evolutionary biology; Gene","score_opus":0.03231276850217952,"score_gpt":0.25468635400271944,"score_spread":0.22237358550053993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975146714","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003180716,0.9864226,0.00019716317,0.000013335782,0.00019617577,0.0006070209,0.00019247532,0.0000100879515,0.009180455],"genre_scores_gemma":[0.0014727945,0.9970196,0.00041382556,0.00005652453,0.00014198909,0.000029915525,0.00035210873,0.000042047213,0.0004712061],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985011,0.00023003653,0.00034252316,0.00047136145,0.00018503497,0.00026992022],"domain_scores_gemma":[0.99882376,0.0000470463,0.00032259818,0.0005985287,0.00009945039,0.00010859585],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040717822,0.0003292502,0.00054615585,0.000042060507,0.00027014516,0.000039675782,0.00042555216,0.00054371334,0.00003818612],"category_scores_gemma":[0.00006932364,0.00025454315,0.00035118478,0.00009922506,0.000235448,0.0000018482734,0.000789645,0.00040556074,0.000024342155],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041011193,0.00006875605,0.0000049976834,0.0023989156,0.00009739868,0.000032505315,0.00002763789,6.5624704e-8,0.010850588,0.0000915074,0.00045726943,0.98592937],"study_design_scores_gemma":[0.0001694506,0.000100470956,0.0000035657588,0.00028984286,0.00020608737,0.000024388954,0.00000958747,3.3853277e-7,0.062517196,0.00013897318,0.9362505,0.0002895914],"about_ca_topic_score_codex":0.000012083557,"about_ca_topic_score_gemma":0.000008608097,"teacher_disagreement_score":0.98563975,"about_ca_system_score_codex":0.0000090533385,"about_ca_system_score_gemma":0.000119696,"threshold_uncertainty_score":0.9999907},"labels":[],"label_agreement":null},{"id":"W1975272351","doi":"10.1016/j.molcel.2008.08.009","title":"Substrate-Assisted Catalysis by PARP10 Limits Its Activity to Mono-ADP-Ribosylation","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":353,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Polymerase; Biology; ADP-ribosylation; Poly ADP ribose polymerase; Biochemistry; Transferase; Enzyme; Residue (chemistry); PARP1; DNA repair; DNA; NAD+ kinase","score_opus":0.03108811992052445,"score_gpt":0.27881148983141346,"score_spread":0.247723369910889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975272351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981917,0.0005739286,0.006042414,0.0013188242,0.00010214667,0.0004789097,0.000028162696,0.000118852775,0.009419732],"genre_scores_gemma":[0.9956251,0.000099536395,0.0004442396,0.0011837754,0.000054090728,0.00008350919,0.00015497023,0.000048277623,0.0023065384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984835,0.00007799279,0.00024053126,0.00044154862,0.0004347928,0.00032165073],"domain_scores_gemma":[0.9989597,0.000026173926,0.00010499481,0.00046984502,0.00015169436,0.00028758773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010508901,0.00022248647,0.00031239656,0.00013563797,0.000116281444,0.000016925116,0.00010302173,0.00014289442,0.00018288026],"category_scores_gemma":[0.00002111351,0.000234717,0.00015332419,0.0005219394,0.000039737377,0.00009476083,0.00001930366,0.0001974651,0.00038417644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021782996,0.00031543736,0.0018798084,0.000031460342,0.00005487445,0.000179481,0.00018876736,0.00011568951,0.98911744,0.000006792477,0.00635731,0.0015351089],"study_design_scores_gemma":[0.0017010897,0.00019581849,0.014625929,0.000025225592,0.00007049466,0.000036138816,0.000011415858,0.00018016745,0.97101253,0.000006433325,0.011903292,0.00023147732],"about_ca_topic_score_codex":0.000067885245,"about_ca_topic_score_gemma":0.000009131289,"teacher_disagreement_score":0.018104922,"about_ca_system_score_codex":0.00019283529,"about_ca_system_score_gemma":0.00011121458,"threshold_uncertainty_score":0.95714813},"labels":[],"label_agreement":null},{"id":"W1976522456","doi":"10.1016/j.molcel.2013.05.004","title":"Arginine Methylation Initiates BMP-Induced Smad Signaling","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":108,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research","keywords":"Biology; Cell biology; SMAD; Signal transduction; Phosphorylation; Bone morphogenetic protein; Bone morphogenetic protein 10; Methylation; BMPR2; Protein arginine methyltransferase 5; Biochemistry; Methyltransferase; Gene; Bone morphogenetic protein 7","score_opus":0.00870626853676322,"score_gpt":0.22537675617949288,"score_spread":0.21667048764272967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976522456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811843,0.0010084612,0.012829715,0.00019697286,0.0001746776,0.00034460082,0.0000029915943,0.000032257547,0.004226027],"genre_scores_gemma":[0.99722886,0.000027569378,0.0014584893,0.00023299835,0.00018126701,0.000052867937,0.00026791712,0.00004557703,0.00050444325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989001,0.00008046311,0.00023269774,0.0003652477,0.00016533972,0.0002561648],"domain_scores_gemma":[0.9993105,0.000009216743,0.00011116019,0.0003437667,0.0001372675,0.0000880862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000113957474,0.00018227242,0.00012978424,0.0000701865,0.00006187072,0.000044733042,0.00012890075,0.00021770538,0.00015645304],"category_scores_gemma":[0.00003383326,0.00019542447,0.00010912654,0.00014790357,0.000025111764,0.000008125466,0.00006514084,0.000103973114,0.00014730703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011292924,0.000027183121,0.00011563821,0.000011787315,0.00003108881,0.0000022913873,0.000028682214,0.0022877902,0.9929767,0.000019238476,0.00042676515,0.0040615457],"study_design_scores_gemma":[0.00049180235,0.00013983472,0.00049348077,0.00000965821,0.000027793727,0.0000034981629,0.000027504484,0.0011420863,0.99304736,0.00022519799,0.004150882,0.00024092672],"about_ca_topic_score_codex":0.00006267109,"about_ca_topic_score_gemma":0.000005714122,"teacher_disagreement_score":0.016044574,"about_ca_system_score_codex":0.000025862084,"about_ca_system_score_gemma":0.00005475201,"threshold_uncertainty_score":0.79691786},"labels":[],"label_agreement":null},{"id":"W1976965279","doi":"10.1016/s1097-2765(00)00139-8","title":"Direct Binding of the Na–H Exchanger NHE1 to ERM Proteins Regulates the Cortical Cytoskeleton and Cell Shape Independently of H+ Translocation","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":409,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Dental and Craniofacial Research; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Moesin; Ezrin; Cell biology; Cytoskeleton; Biology; Radixin; Colocalization; Actin cytoskeleton; Actin; Actin-binding protein; Actin remodeling; Lamellipodium; Cell; Biochemistry","score_opus":0.005741085937934185,"score_gpt":0.20839544261950765,"score_spread":0.20265435668157347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976965279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950339,0.00070157694,0.0008721533,0.00019260925,0.000056761724,0.00045949608,0.000017041693,0.000004116959,0.0026623162],"genre_scores_gemma":[0.99835247,0.00013080273,0.00014765095,0.00012927219,0.00002438024,0.000027798884,0.000020095878,0.000021393264,0.0011461608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991076,0.00009733119,0.0002218889,0.00024300706,0.00017100989,0.00015916146],"domain_scores_gemma":[0.9994148,0.000011183719,0.000078942154,0.00038526446,0.000057735495,0.000052084033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016604744,0.00012500116,0.0001268761,0.000032550524,0.00008518989,0.000015442709,0.00020396843,0.00010508991,0.00012332143],"category_scores_gemma":[0.000017812547,0.00008743951,0.000118555974,0.00013900027,0.00005386293,0.0000036062704,0.0000655539,0.00010614114,0.000005189132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039855087,0.0000790004,0.000038946207,0.00002875314,0.0000183564,9.752905e-7,0.00015457894,0.00006392463,0.99657834,0.00003513716,0.0000633529,0.0028987776],"study_design_scores_gemma":[0.0002337824,0.00018945789,0.0002463773,0.000024705445,0.000034263117,0.0000042300403,0.000060050876,0.00035167675,0.9929289,0.000015516474,0.0058091064,0.0001018944],"about_ca_topic_score_codex":0.00004201968,"about_ca_topic_score_gemma":0.000019950105,"teacher_disagreement_score":0.005745753,"about_ca_system_score_codex":0.000008328298,"about_ca_system_score_gemma":0.000032953605,"threshold_uncertainty_score":0.35656798},"labels":[],"label_agreement":null},{"id":"W1977374512","doi":"10.1016/j.molcel.2005.01.007","title":"Maintenance of Low Histone Ubiquitylation by Ubp10 Correlates with Telomere-Proximal Sir2 Association and Gene Silencing","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":178,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Histone methyltransferase; Gene silencing; Histone H2B; Histone; Telomere; Histone H2A; Genetics; Gene; Histone H3; Methylation; Cell biology","score_opus":0.001566818233739219,"score_gpt":0.17595462717791824,"score_spread":0.17438780894417902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977374512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990075,0.0011644969,0.007831815,0.00008823103,0.000027885839,0.00012303422,0.000022482132,0.0000067736137,0.00066027953],"genre_scores_gemma":[0.9941367,0.00014628135,0.0046946765,0.000117822674,0.00002795864,0.0000060082803,0.00012587752,0.000024077575,0.00072060124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992407,0.000025468773,0.00018248394,0.00024191695,0.00012614742,0.00018331414],"domain_scores_gemma":[0.999485,0.0000065598892,0.00020042509,0.00017522248,0.00008593255,0.00004686131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011747615,0.00012766132,0.00013010757,0.000023779994,0.000041369367,0.000013845342,0.00008037948,0.00013369147,0.000005952631],"category_scores_gemma":[0.000018294133,0.00012583233,0.00003807224,0.000051657622,0.00003591212,0.0000043871955,0.000050353436,0.000071113776,0.0000026870216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025727339,0.000052705644,0.0019330885,0.000032150976,0.000025039077,0.0000016097868,0.000061806124,0.0012160541,0.99549824,0.00001977177,0.0002812957,0.0008525333],"study_design_scores_gemma":[0.00062098104,0.00019455118,0.000746013,0.000014531223,0.000027781143,0.000005496438,0.000034986217,0.0040489775,0.9931662,0.000021780124,0.00094118185,0.0001775165],"about_ca_topic_score_codex":0.000012954536,"about_ca_topic_score_gemma":0.000014095472,"teacher_disagreement_score":0.004061694,"about_ca_system_score_codex":0.00006249187,"about_ca_system_score_gemma":0.000035207748,"threshold_uncertainty_score":0.51312935},"labels":[],"label_agreement":null},{"id":"W1979239647","doi":"10.1016/j.molcel.2009.01.007","title":"HBO1 HAT Complexes Target Chromatin throughout Gene Coding Regions via Multiple PHD Finger Interactions with Histone H3 Tail","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":178,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Université Laval; Hôtel-Dieu de Québec","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research","keywords":"Biology; Chromatin; Histone; Histone code; PHD finger; Genetics; Cell biology; Chromatin remodeling; Histone H2A; Histone H1; Histone H3; Gene; Nucleosome; Transcription factor; Zinc finger","score_opus":0.009318979008562834,"score_gpt":0.23441229669395777,"score_spread":0.22509331768539495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979239647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80536693,0.00071509316,0.19000173,0.00040752077,0.000120998855,0.00027274725,0.000040136023,0.00004312487,0.0030317227],"genre_scores_gemma":[0.9633699,0.000063738415,0.03411814,0.0007759993,0.00009448309,0.000014973126,0.0006674955,0.000054066182,0.00084117963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985944,0.00005568859,0.00029254498,0.0004991926,0.00016793638,0.00039021412],"domain_scores_gemma":[0.99897504,0.000012243184,0.00018164839,0.00061075354,0.000096244104,0.00012405569],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007758349,0.0003052434,0.00025129362,0.000060288316,0.0002251297,0.000071269555,0.00027666098,0.00012931379,0.00003888683],"category_scores_gemma":[0.000019232286,0.00029971698,0.00015270077,0.000118033626,0.00009185329,0.000011122284,0.00009222626,0.00016991113,0.000029054034],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002934587,0.00018287478,0.00017524269,0.00001772361,0.00004894015,0.0000353141,0.00012455197,0.0021292593,0.995747,0.00007380794,0.0011009213,0.00033498005],"study_design_scores_gemma":[0.0009966575,0.00039572373,0.00055578444,0.00002601055,0.000057591107,0.00008034352,0.000138656,0.0082711615,0.9684002,0.00024706943,0.020310605,0.0005202248],"about_ca_topic_score_codex":0.00005524366,"about_ca_topic_score_gemma":0.00007218075,"teacher_disagreement_score":0.158003,"about_ca_system_score_codex":0.000068186106,"about_ca_system_score_gemma":0.00006679123,"threshold_uncertainty_score":0.9999455},"labels":[],"label_agreement":null},{"id":"W1980051146","doi":"10.1016/j.molcel.2009.04.001","title":"Epigenetic Silencing of the p16 Tumor Suppressor Is Associated with Loss of CTCF Binding and a Chromatin Boundary","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":236,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; Samuel Waxman Cancer Research Foundation","keywords":"CTCF; Biology; Gene silencing; Chromatin; Carcinogenesis; Epigenetics; Tumor suppressor gene; DNA methylation; Suppressor; Cancer research; Gene; Genetics; Cell biology; Gene expression; Enhancer","score_opus":0.004543150926479981,"score_gpt":0.20599842374516592,"score_spread":0.20145527281868594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980051146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956286,0.0025110508,0.0008691455,0.00005713724,0.00002526985,0.00018692401,0.000025766762,0.0000036930935,0.0006924308],"genre_scores_gemma":[0.9991476,0.000056055633,0.00055103167,0.000097602606,0.000012264946,0.0000031118122,0.000020687592,0.000016640339,0.000094995026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990862,0.00008308496,0.00023398663,0.00023019126,0.00018958117,0.00017697412],"domain_scores_gemma":[0.999311,0.000014352867,0.00023322119,0.0003100656,0.00008694758,0.00004445476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016189722,0.00013420489,0.0001740524,0.00003516997,0.000060798422,0.000014097828,0.0001458696,0.00008615791,0.0000074820973],"category_scores_gemma":[0.00006343971,0.000103370476,0.00007441839,0.00013105388,0.00011217657,0.0000023903203,0.00006055746,0.00006489782,4.0810113e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017786173,0.00005521418,0.0038257607,0.000028664932,0.000026800702,0.0000046278483,0.00014298123,0.00012095854,0.99546766,0.0000064976493,0.000014187546,0.0002888818],"study_design_scores_gemma":[0.00048186086,0.00039265509,0.014411021,0.000063565014,0.000045450928,0.0000021294593,0.00003572247,0.000109742905,0.9840676,0.00013383549,0.0001320222,0.00012440402],"about_ca_topic_score_codex":0.000012780954,"about_ca_topic_score_gemma":0.0000064753654,"teacher_disagreement_score":0.011400048,"about_ca_system_score_codex":0.000009602089,"about_ca_system_score_gemma":0.0000701335,"threshold_uncertainty_score":0.42153257},"labels":[],"label_agreement":null},{"id":"W1980321103","doi":"10.1016/j.molcel.2009.10.001","title":"The CST Complex and Telomere Maintenance: The Exception Becomes the Rule","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Telomere; Scopus; Shelterin; Biology; Cell function; Bioinformatics; Genetics; Cell; DNA; Biochemistry; MEDLINE; Gene; DNA-binding protein; Transcription factor","score_opus":0.010583629710025369,"score_gpt":0.24236556633861286,"score_spread":0.23178193662858748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980321103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90929127,0.006183018,0.0008469205,0.061935723,0.00020128954,0.0008454113,0.000007326987,0.0000912622,0.020597797],"genre_scores_gemma":[0.98964864,0.0007572217,0.00013942423,0.007029299,0.00010936067,0.000012963369,0.000011202926,0.000017559574,0.0022743542],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998784,0.0000971475,0.00020972543,0.00024413737,0.00030761064,0.00035738578],"domain_scores_gemma":[0.99905586,0.00010603277,0.00007787807,0.00059955794,0.00007052342,0.00009012979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030464333,0.00018001763,0.00018121954,0.000028954937,0.0005164951,0.00008902716,0.0002519149,0.000060301805,0.000071848284],"category_scores_gemma":[0.00005487381,0.000079609425,0.0001044684,0.00019483207,0.0003023296,0.000034516932,0.000050166975,0.00027460064,0.000060556067],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040102474,0.00039308,0.0056983097,0.00012329992,0.00014080327,0.000375975,0.0048490413,0.00003256654,0.46787715,0.007330334,0.06486138,0.44791704],"study_design_scores_gemma":[0.0020922858,0.00044514067,0.3998243,0.00008707854,0.000195916,0.00025119635,0.0025293052,0.000722419,0.026079418,0.0037916664,0.5635433,0.00043794024],"about_ca_topic_score_codex":0.000039354003,"about_ca_topic_score_gemma":0.000011116715,"teacher_disagreement_score":0.49868196,"about_ca_system_score_codex":0.00002943719,"about_ca_system_score_gemma":0.00003810475,"threshold_uncertainty_score":0.3972515},"labels":[],"label_agreement":null},{"id":"W1980716967","doi":"10.1016/j.molcel.2007.07.011","title":"Genome-Wide Replication-Independent Histone H3 Exchange Occurs Predominantly at Promoters and Implicates H3 K56 Acetylation and Asf1","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":315,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute; Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research","keywords":"Biology; Nucleosome; Histone H3; Promoter; Histone; Histone octamer; Histone code; Cell biology; Transcription (linguistics); Genetics; Gene; Gene expression","score_opus":0.004591579587508327,"score_gpt":0.2242033581677358,"score_spread":0.21961177858022746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980716967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876998,0.0035989499,0.006597274,0.00018352823,0.000044963417,0.00047363428,0.00002256482,0.000015354546,0.0013638976],"genre_scores_gemma":[0.9961025,0.0005017986,0.0017087578,0.00021164457,0.000039840146,0.000027347942,0.00032371492,0.000042277738,0.0010421344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986132,0.000029585997,0.00026538677,0.0006535339,0.00012740315,0.00031088328],"domain_scores_gemma":[0.9989999,0.000012053042,0.00016245045,0.00061493734,0.00006140764,0.00014923254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033924988,0.00021247972,0.00015768403,0.00005607007,0.00012856362,0.00003549125,0.00014791529,0.00019241845,0.0000060108405],"category_scores_gemma":[0.000029049781,0.00022736071,0.00005929805,0.00006090346,0.000091788526,0.000004903342,0.00026630753,0.00007821565,0.000006535939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004912886,0.000044912445,0.0055779004,0.00006419247,0.000025706144,0.0000101553505,0.00016016219,0.000017543913,0.9922279,0.000015635766,0.0001353196,0.0016714294],"study_design_scores_gemma":[0.0010851969,0.00029838615,0.07689224,0.000010061863,0.00006300221,0.00006531249,0.00008342897,0.00029957562,0.9000905,0.00015906361,0.020481784,0.00047141107],"about_ca_topic_score_codex":0.00002036282,"about_ca_topic_score_gemma":0.000037134498,"teacher_disagreement_score":0.09213738,"about_ca_system_score_codex":0.000068421985,"about_ca_system_score_gemma":0.000025428277,"threshold_uncertainty_score":0.9271501},"labels":[],"label_agreement":null},{"id":"W1981067425","doi":"10.1016/j.molcel.2008.02.021","title":"Toward a Comprehensive Temperature-Sensitive Mutant Repository of the Essential Genes of Saccharomyces cerevisiae","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":219,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Center for Research Resources; National Cancer Institute","keywords":"Biology; Genetics; Gene; Saccharomyces cerevisiae; Allele; Mutant; Locus (genetics); Computational biology","score_opus":0.010799625749370854,"score_gpt":0.22706412508526852,"score_spread":0.21626449933589767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981067425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937389,0.003968076,0.00009459939,0.000052710984,0.00012495033,0.00021664728,0.000034676515,0.0000034689483,0.0017659697],"genre_scores_gemma":[0.99875146,0.00039435131,0.00030485314,0.00006186036,0.000076178374,0.0000059286785,0.000021029402,0.000020011325,0.00036433217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881405,0.00015447516,0.00024618008,0.00028497598,0.00030620905,0.00019413396],"domain_scores_gemma":[0.99904466,0.000010972078,0.00012713132,0.00044302913,0.00031483633,0.00005934901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004633966,0.0001510441,0.00020433169,0.0000342095,0.00008232524,0.000006705486,0.0002817333,0.0001300162,0.000005912766],"category_scores_gemma":[0.000016972626,0.000112883696,0.00022297038,0.00013171953,0.00031241725,0.0000016404902,0.00024671791,0.00011284545,0.0000024971484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007870989,0.00007818458,0.00042465387,0.000088237146,0.00006238073,0.000054858658,0.00012292367,0.00018579957,0.9986818,0.00001749444,0.00013574312,0.000069211455],"study_design_scores_gemma":[0.00033563309,0.00017259481,0.0013693242,0.000021987236,0.000021876156,0.00007383687,0.000095886506,0.000024791216,0.9965511,0.000009393837,0.001202619,0.00012098945],"about_ca_topic_score_codex":0.00003785925,"about_ca_topic_score_gemma":0.0000013510663,"teacher_disagreement_score":0.0050125546,"about_ca_system_score_codex":0.000006349805,"about_ca_system_score_gemma":0.00014192487,"threshold_uncertainty_score":0.46032634},"labels":[],"label_agreement":null},{"id":"W1981869745","doi":"10.1016/s1097-2765(03)00096-0","title":"In Situ Orientations of Protein Domains","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cardiomyopathy and Myosin Studies","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Actin; Protein filament; Tropomyosin; Biophysics; Biology; Troponin C; Myosin head; Crystallography; Muscle contraction; Fluorescence anisotropy; Helix (gastropod); Troponin; Myosin; Anatomy; Biochemistry; Myosin light-chain kinase; Chemistry","score_opus":0.006897125173498115,"score_gpt":0.2459476067148253,"score_spread":0.2390504815413272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981869745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85935605,0.00073505606,0.0015263691,0.000102880105,0.000041491425,0.0002817673,0.0000013647898,0.0000067936553,0.13794826],"genre_scores_gemma":[0.9968261,0.000011448188,0.0019653363,0.00014028567,0.000007307449,0.000026735033,0.0000023556997,0.0000070101937,0.001013438],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99955875,0.00003221665,0.000112997775,0.000095263225,0.000104705796,0.000096040065],"domain_scores_gemma":[0.99977094,0.0000069833072,0.000023681363,0.00013576836,0.000034353587,0.000028296288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008133769,0.00005350177,0.00014083502,0.000058995716,0.000014021138,0.0000016326115,0.000016965376,0.000025993415,0.000020247646],"category_scores_gemma":[0.00004309971,0.000050400224,0.000063985564,0.00017979664,0.000031848347,0.000014067247,0.000009967184,0.0000535424,0.000011796238],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019848881,0.00014756553,0.0012665541,0.00007122311,0.00001722229,0.0002897708,0.00055655115,0.000007126652,0.99178535,0.0055598696,0.00017327131,0.00010562928],"study_design_scores_gemma":[0.0012088944,0.00008510859,0.0014530277,0.000029129773,0.000039277074,0.000011549472,0.00036751316,6.65096e-7,0.9766131,0.00044825408,0.019685587,0.000057860143],"about_ca_topic_score_codex":0.000012065025,"about_ca_topic_score_gemma":0.00000543431,"teacher_disagreement_score":0.13747007,"about_ca_system_score_codex":0.000017917817,"about_ca_system_score_gemma":0.00003356001,"threshold_uncertainty_score":0.20552614},"labels":[],"label_agreement":null},{"id":"W1982315838","doi":"10.1016/s1097-2765(02)00741-4","title":"MLL Targets SET Domain Methyltransferase Activity to Hox Gene Promoters","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1054,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Heart, Lung, and Blood Institute","keywords":"Biology; Hox gene; Histone methyltransferase; Histone H3; Regulation of gene expression; Histone; Genetics; Histone methylation; DNA methylation; Gene; Promoter; Gene expression; Molecular biology","score_opus":0.011693932158576299,"score_gpt":0.23237223702827176,"score_spread":0.22067830486969545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982315838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8869293,0.0017846153,0.10715889,0.0003810577,0.000118679185,0.0003708006,0.000037266094,0.000019164647,0.0032002393],"genre_scores_gemma":[0.9898374,0.0001710936,0.008669257,0.00044603413,0.000089624016,0.00003755419,0.00008396155,0.00005085127,0.0006142267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851596,0.00015505006,0.00018222464,0.0005497575,0.00021728428,0.00037969943],"domain_scores_gemma":[0.999114,0.000007001001,0.00004740641,0.0005352802,0.00006300594,0.00023332647],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002097894,0.00024079821,0.00017442899,0.00007180246,0.000082652376,0.000036941263,0.00020750937,0.00018213798,0.000084138555],"category_scores_gemma":[0.000028895605,0.0002538663,0.0001478901,0.00015423608,0.000034420693,0.000003796768,0.00007958572,0.000110050896,0.00008844923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029114013,0.00011775814,0.000110265304,0.00001616288,0.000027407948,0.000045494286,0.00013750985,0.00037746396,0.99455327,0.0000061826186,0.00038888253,0.0041904612],"study_design_scores_gemma":[0.00046690248,0.0003509663,0.00023606779,0.0000034784068,0.000018928285,0.0000019236106,0.00000938122,0.00011846033,0.95015365,0.00010794601,0.04822266,0.00030961612],"about_ca_topic_score_codex":0.000023825169,"about_ca_topic_score_gemma":0.000012759251,"teacher_disagreement_score":0.10290811,"about_ca_system_score_codex":0.000021002139,"about_ca_system_score_gemma":0.000018568539,"threshold_uncertainty_score":0.99999136},"labels":[],"label_agreement":null},{"id":"W1983204491","doi":"10.1016/s1097-2765(02)00596-8","title":"The Mu Three-Site Synapse","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biology; Synapse; Computational biology; Cell biology; Neuroscience","score_opus":0.020330584095155493,"score_gpt":0.27062055923913936,"score_spread":0.2502899751439839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983204491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7948911,0.012524161,0.0014141176,0.028368257,0.00011561181,0.00043693223,0.0000036956433,0.000080798105,0.16216533],"genre_scores_gemma":[0.99107707,0.0005862304,0.0002560302,0.003428433,0.000070522765,0.000021159605,0.000007613925,0.000018941315,0.004533977],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99894947,0.00009802871,0.00014970511,0.00019224678,0.0001924215,0.0004181228],"domain_scores_gemma":[0.9991737,0.00012069064,0.00002594501,0.00045223726,0.000042726322,0.00018468879],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002661692,0.000095487485,0.00015805641,0.00003670703,0.00011050628,0.000014449594,0.000117566015,0.000076543685,0.00040154025],"category_scores_gemma":[0.00026550193,0.00005890065,0.00012158374,0.000117656266,0.00010283956,0.000015616182,0.00005654638,0.00025328813,0.0017851649],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026366545,0.00061282766,0.049102515,0.00015545693,0.00034653165,0.0034727866,0.00028859678,0.00008367492,0.46820834,0.0026652797,0.41498384,0.05981649],"study_design_scores_gemma":[0.0020001729,0.0007474417,0.015285793,0.00003142839,0.00010683877,0.00016076418,0.000048683847,0.014493501,0.04381416,0.00060407707,0.9224138,0.00029329988],"about_ca_topic_score_codex":0.000052839932,"about_ca_topic_score_gemma":0.000028574694,"teacher_disagreement_score":0.50743,"about_ca_system_score_codex":0.000026883088,"about_ca_system_score_gemma":0.0000116501815,"threshold_uncertainty_score":0.9989921},"labels":[],"label_agreement":null},{"id":"W1983499457","doi":"10.1016/j.molcel.2004.11.031","title":"Pre-18S Ribosomal RNA Is Structurally Compacted into the SSU Processome Prior to Being Cleaved from Nascent Transcripts in Saccharomyces cerevisiae","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":259,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"National Institute of General Medical Sciences","keywords":"Biology; Ribosomal RNA; Saccharomyces cerevisiae; Ribosome; Cleavage (geology); RNA; Transcription (linguistics); Cell biology; Context (archaeology); Genetics; Gene","score_opus":0.005727522492535995,"score_gpt":0.23566807091323405,"score_spread":0.22994054842069805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983499457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920277,0.002096776,0.0029430143,0.0017310376,0.00009104368,0.0005887807,0.000029389643,0.00001765357,0.00047462207],"genre_scores_gemma":[0.9962773,0.00013697943,0.0016317723,0.001534407,0.00008680419,0.0000662448,0.000108821994,0.000038688187,0.00011902749],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847966,0.00006358905,0.00034154186,0.0005451981,0.00023426146,0.00033571818],"domain_scores_gemma":[0.99913687,0.0000051111683,0.000094657255,0.00054694945,0.000090087946,0.00012634031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008794697,0.00024844552,0.00020353282,0.000054541993,0.00012408919,0.00009298866,0.0004932362,0.00014055311,0.000037830483],"category_scores_gemma":[0.000018388873,0.00020066439,0.0001203809,0.00022475538,0.000055706507,0.000009977807,0.00007539451,0.00016740168,0.000015299242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009448645,0.000069288544,0.0004988719,0.000027655658,0.000037500453,0.000008680876,0.0024150787,0.00079524465,0.9921275,0.000057227688,0.00007399392,0.0037945092],"study_design_scores_gemma":[0.001180373,0.00014454659,0.020790711,0.00005542431,0.000032825235,0.0000018449979,0.00020376613,0.000045480352,0.9659378,0.0004735175,0.010820576,0.00031314604],"about_ca_topic_score_codex":0.00055563485,"about_ca_topic_score_gemma":0.00022491529,"teacher_disagreement_score":0.026189672,"about_ca_system_score_codex":0.00006819379,"about_ca_system_score_gemma":0.00013824059,"threshold_uncertainty_score":0.81828564},"labels":[],"label_agreement":null},{"id":"W1984626450","doi":"10.1016/s1097-2765(01)00433-6","title":"ResT, a Telomere Resolvase Encoded by the Lyme Disease Spirochete","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Tn3 transposon; Biology; Telomere; Phosphodiester bond; DNA; Borrelia burgdorferi; Telomere-binding protein; Covalent bond; Nucleotide; Genome; Genetics; RNA; Transposable element; Gene; DNA-binding protein; Chemistry","score_opus":0.007657174613603804,"score_gpt":0.1977289462510348,"score_spread":0.190071771637431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984626450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.925556,0.052515898,0.00021415172,0.0011387891,0.00032646133,0.00046950066,0.00014008312,0.00022793454,0.019411158],"genre_scores_gemma":[0.9894622,0.00011028934,0.000010395471,0.0016619338,0.000024790968,0.0000697783,0.0000827149,0.000040514475,0.00853737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854845,0.00030771297,0.00021635555,0.00040933106,0.00006663229,0.00045152009],"domain_scores_gemma":[0.9989576,0.00007468718,0.00008734317,0.00074690214,0.000042002015,0.00009149353],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008574358,0.00024186527,0.00018152465,0.000058511552,0.0002490125,0.00003312821,0.00035350528,0.00013953935,0.0021722352],"category_scores_gemma":[0.000114223156,0.00018697971,0.00020028843,0.0001812979,0.00024336338,0.000047261572,0.00011179315,0.00026752782,0.002999872],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008491896,0.0005568803,0.0011558401,0.000027605554,0.00013027889,0.0002422833,0.00015282682,0.000027084598,0.85102886,0.0002255851,0.14514701,0.0012208474],"study_design_scores_gemma":[0.002638203,0.00025480945,0.0020540021,0.00003150251,0.00038198612,0.00006173372,0.00008193576,0.000075319585,0.5562164,0.00038614846,0.43710405,0.00071386684],"about_ca_topic_score_codex":0.00008128642,"about_ca_topic_score_gemma":0.000007204319,"teacher_disagreement_score":0.2948124,"about_ca_system_score_codex":0.00004334533,"about_ca_system_score_gemma":0.000031761094,"threshold_uncertainty_score":0.9987399},"labels":[],"label_agreement":null},{"id":"W1986113553","doi":"10.1016/j.molcel.2004.12.004","title":"Revealing Global Regulatory Features of Mammalian Alternative Splicing Using a Quantitative Microarray Platform","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":325,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Alternative splicing; Computational biology; Exon; RNA splicing; Microarray analysis techniques; Gene; Transcription factor; Transcription (linguistics); Gene expression profiling; Microarray; Genetics; Gene expression; RNA","score_opus":0.016373235093468528,"score_gpt":0.2894128029392629,"score_spread":0.27303956784579436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986113553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9696827,0.0015551382,0.026708422,0.000037114147,0.000066374094,0.00021365334,0.000027134547,0.000008411019,0.0017010713],"genre_scores_gemma":[0.98038936,0.000028018801,0.019100828,0.00014171597,0.000052703264,0.000004238415,0.00003798842,0.000028305962,0.000216821],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99860317,0.000050374503,0.0002559884,0.00039529582,0.0003012679,0.00039391482],"domain_scores_gemma":[0.9992174,0.0000058360383,0.0001307219,0.0003655805,0.00015180113,0.00012864056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023483402,0.00020218772,0.00021213086,0.00006133617,0.00009050773,0.000024585252,0.00025999438,0.00015068357,0.000004092379],"category_scores_gemma":[0.000057096684,0.00020203998,0.00016340551,0.00016958395,0.00012012257,0.000008194378,0.00013650753,0.00014382496,0.0000037420784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012273609,0.000046962337,0.0003046862,0.000056705776,0.000058846224,0.000057557452,0.00010170627,0.008335587,0.989449,0.0011613602,0.000029029,0.0002757796],"study_design_scores_gemma":[0.00088245154,0.000273119,0.0005854215,0.000076423625,0.000020790289,0.000027673566,0.00025609683,0.00013717044,0.9969765,0.0004349676,0.00011559444,0.00021377283],"about_ca_topic_score_codex":0.0009453,"about_ca_topic_score_gemma":0.000093605304,"teacher_disagreement_score":0.0107066985,"about_ca_system_score_codex":0.000097133525,"about_ca_system_score_gemma":0.00017493509,"threshold_uncertainty_score":0.82389516},"labels":[],"label_agreement":null},{"id":"W1986468286","doi":"10.1016/s1097-2765(01)00168-x","title":"Translational Repression by a Novel Partner of Human Poly(A) Binding Protein, Paip2","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":208,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; Health Canada; Human Frontier Science Program; National Cancer Institute; National Institutes of Health; Medical Research Council Canada","keywords":"EIF4G; Poly(A)-binding protein; Biology; EIF4E; Messenger RNA; RNA-binding protein; Cell biology; Translation (biology); Repressor; Binding protein; Eukaryotic translation; Molecular biology; Biochemistry; Gene expression; Gene","score_opus":0.015001436827651008,"score_gpt":0.28043968422851834,"score_spread":0.26543824740086736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986468286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9817989,0.00073873706,0.013015734,0.00011199928,0.0000118085745,0.00021426403,0.00001658121,0.000007831906,0.0040841387],"genre_scores_gemma":[0.99114513,0.000018948025,0.00080190884,0.000050224935,0.00003147553,0.000022670132,0.0002084678,0.00002283657,0.007698312],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897254,0.000045859262,0.0001902131,0.00029343713,0.00024266838,0.0002552887],"domain_scores_gemma":[0.9994945,0.0000036903057,0.000067628025,0.00028472394,0.000055137305,0.000094340474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016285718,0.00011593031,0.000110912646,0.000045901845,0.000076970086,0.000014483274,0.00015672845,0.00011286759,0.000048785332],"category_scores_gemma":[0.0000201615,0.00011008965,0.00009897878,0.00009675753,0.00005056136,0.0000036026133,0.000050908006,0.00009033017,0.0000052534424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048079386,0.00011668865,0.00088174397,0.000019703499,0.000016854252,0.0000093412955,0.000011806529,0.000014893964,0.9976703,0.000050950406,0.0004991526,0.000660487],"study_design_scores_gemma":[0.0006686104,0.00017546276,0.000093869996,0.000021867352,0.000006007946,0.0000040703158,0.0000141738965,0.00011112412,0.9906716,0.000022573706,0.008083011,0.00012763219],"about_ca_topic_score_codex":0.000035633064,"about_ca_topic_score_gemma":0.0000039392958,"teacher_disagreement_score":0.012213825,"about_ca_system_score_codex":0.0000055826486,"about_ca_system_score_gemma":0.00003547645,"threshold_uncertainty_score":0.44893256},"labels":[],"label_agreement":null},{"id":"W1986571428","doi":"10.1016/j.molcel.2014.01.029","title":"The Breast Cancer Oncogene EMSY Represses Transcription of Antimetastatic microRNA miR-31","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"National Institute for Health and Care Research; Cancer Research UK; Wellcome Trust","keywords":"Biology; microRNA; Cancer research; Gene silencing; Oncogene; Breast cancer; Transcription factor; Demethylase; Cancer; Gene; Genetics; Histone; Cell cycle","score_opus":0.005149656146378397,"score_gpt":0.22673828521761313,"score_spread":0.22158862907123475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986571428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9838326,0.0051757027,0.009357525,0.0002702844,0.0001262395,0.00023252076,0.0000692867,0.000010276319,0.0009255753],"genre_scores_gemma":[0.998473,0.00026653506,0.00056746264,0.00012753798,0.00006752324,0.000023317723,0.00009474816,0.000029638963,0.00035025063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897426,0.00012639826,0.00024768047,0.0002961536,0.0001505631,0.00020492374],"domain_scores_gemma":[0.9991454,0.000011276638,0.00015104194,0.00050466397,0.00012399275,0.00006363976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018581652,0.00014914329,0.00013382647,0.000026799094,0.00007867556,0.000023094317,0.00021514515,0.0000840875,0.000022297028],"category_scores_gemma":[0.000021103353,0.00012263547,0.00014638579,0.00008967685,0.00010427656,0.0000034583006,0.000042026062,0.000050535473,0.000007918242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073051604,0.00005783926,0.00024345474,0.000061054205,0.000055878376,0.000001460185,0.00001816031,0.00036847987,0.994554,0.000025405212,0.0014006291,0.0031405964],"study_design_scores_gemma":[0.0004252219,0.000051961208,0.00204066,0.000019308683,0.0000791154,0.00000907933,0.000011510183,0.00020333039,0.9696688,0.0000667147,0.02728309,0.00014119534],"about_ca_topic_score_codex":0.000047096757,"about_ca_topic_score_gemma":0.000015575106,"teacher_disagreement_score":0.02588246,"about_ca_system_score_codex":0.000013680385,"about_ca_system_score_gemma":0.00006601635,"threshold_uncertainty_score":0.50009286},"labels":[],"label_agreement":null},{"id":"W1987211450","doi":"10.1016/j.molcel.2013.01.017","title":"Regulation of DNA Damage Responses by Ubiquitin and SUMO","year":2013,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":594,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Cancer Research UK; Wellcome Trust","keywords":"Biology; Ubiquitin; DNA damage; DNA; Cell biology; DNA repair; Ubiquitins; SUMO protein; Genetics; Computational biology; Ubiquitin ligase; Gene","score_opus":0.0194402798777308,"score_gpt":0.27054674741119356,"score_spread":0.2511064675334628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987211450","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007276382,0.9878005,0.00027145128,0.000010092954,0.000048475697,0.00074937503,0.00019264696,0.000012017592,0.003639107],"genre_scores_gemma":[0.0022310587,0.9915273,0.0006731246,0.000054573127,0.00006461371,0.00010593102,0.0011534634,0.00008611146,0.0041038143],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99826396,0.00037017965,0.0004398117,0.0005105393,0.00016232001,0.00025318837],"domain_scores_gemma":[0.998867,0.000029352355,0.0003447087,0.0005820918,0.00007034647,0.000106539155],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002494402,0.0003698424,0.0006729455,0.00008197856,0.000042930507,0.000032806507,0.00024763975,0.0004971781,0.000085326734],"category_scores_gemma":[0.00006755924,0.00034197184,0.0002581924,0.00009004252,0.00011623588,0.000003066566,0.00020955279,0.00015590449,0.000033153963],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020605545,0.000060336242,0.0000024956942,0.007058335,0.00008148572,0.000008315087,0.000016642798,2.481042e-7,0.77240735,0.00007123363,0.0052810786,0.21499187],"study_design_scores_gemma":[0.00013114155,0.00013040459,0.000001340146,0.00046548154,0.00011440173,0.000008563013,0.0000042690403,0.0000012485975,0.31966805,0.000023984634,0.6792024,0.00024870914],"about_ca_topic_score_codex":0.000010889094,"about_ca_topic_score_gemma":7.105212e-7,"teacher_disagreement_score":0.67392135,"about_ca_system_score_codex":0.000011518463,"about_ca_system_score_gemma":0.00012210214,"threshold_uncertainty_score":0.9999032},"labels":[],"label_agreement":null},{"id":"W1987482424","doi":"10.1016/s1097-2765(04)00263-1","title":"During Apoptosis Bcl-2 Changes Membrane Topology at Both the Endoplasmic Reticulum and Mitochondria","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Endoplasmic reticulum; Cell biology; Biology; Mitochondrion; Target peptide; Membrane topology; STIM1; Apoptosis; Membrane contact site; Cell; Topology (electrical circuits); Membrane; Membrane protein; Peptide; Biophysics; Biochemistry; Integral membrane protein","score_opus":0.003397630347899148,"score_gpt":0.18612299325270837,"score_spread":0.18272536290480923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987482424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943553,0.0018163814,0.00082167593,0.0010823681,0.00022455677,0.00027161726,0.0000050395734,0.000016121792,0.001406919],"genre_scores_gemma":[0.995579,0.0012798503,0.0006988812,0.0003361717,0.00011974292,0.000031404437,0.000050674083,0.000031751617,0.0018725194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902993,0.000052486954,0.00013130586,0.0003864876,0.0001194729,0.0002803236],"domain_scores_gemma":[0.9994555,0.000005804734,0.000068529116,0.0003697549,0.000025060026,0.0000753109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000733155,0.00018094009,0.0001318491,0.000035848123,0.0001960084,0.000024236688,0.00013380875,0.0001789636,0.00003512424],"category_scores_gemma":[0.000009330994,0.00013913616,0.00007538512,0.00006165552,0.00010367027,0.0000021785938,0.00014471555,0.000079908816,0.000011777378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035671565,0.000024751778,0.000030383937,0.00003174311,0.000023223569,0.000010596555,0.00009346852,0.00020760797,0.9989724,0.0003241354,0.00004317186,0.00020282628],"study_design_scores_gemma":[0.0009030349,0.00014290455,0.00017340275,0.000009001393,0.00003766545,0.00006185208,0.000049263024,0.000024719006,0.98576796,0.00018200508,0.012468049,0.00018015478],"about_ca_topic_score_codex":0.000028692939,"about_ca_topic_score_gemma":0.000091558424,"teacher_disagreement_score":0.013204471,"about_ca_system_score_codex":0.000020894933,"about_ca_system_score_gemma":0.000017539183,"threshold_uncertainty_score":0.5673808},"labels":[],"label_agreement":null},{"id":"W1987520432","doi":"10.1016/j.molcel.2006.05.027","title":"Essential Role for IκB Kinase β in Remodeling Carma1-Bcl10-Malt1 Complexes upon T Cell Activation","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":132,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Deutsche Forschungsgemeinschaft","keywords":"IκB kinase; BCL10; Biology; Phosphorylation; Cell biology; Kinase; Signal transduction; NF-κB; Cancer research; Biochemistry; Gene","score_opus":0.006376159926860111,"score_gpt":0.21999711469353214,"score_spread":0.21362095476667203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987520432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90440124,0.00068285764,0.09190284,0.000050464878,0.000095725205,0.00043387097,0.00002980315,0.000026097629,0.0023770963],"genre_scores_gemma":[0.99297315,0.000009587044,0.0054324754,0.0001668353,0.00022619411,0.000054188647,0.0007688554,0.000068199246,0.0003005297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844503,0.000079900055,0.00032937332,0.0005461275,0.00018327204,0.00041629386],"domain_scores_gemma":[0.99930024,0.000015719363,0.00012836515,0.00038981187,0.00010333037,0.00006253446],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002018442,0.00024376261,0.00019352972,0.00009953452,0.00008530782,0.000042747848,0.00021681956,0.00021384173,0.000009883427],"category_scores_gemma":[0.000022709477,0.00028413758,0.0001594994,0.00012034398,0.000029856476,0.000006803749,0.00008864703,0.00012200886,0.00000880876],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010354737,0.00016622661,0.00015799403,0.000059774586,0.0000060761204,0.000010286925,0.00003135229,0.02532891,0.9734846,0.00007607995,0.00033660978,0.00023857909],"study_design_scores_gemma":[0.0012821404,0.00012426749,0.000044515633,0.000018205721,0.000020875117,0.0000019562312,0.000042490345,0.006485625,0.9824099,0.0005130976,0.00873932,0.00031762256],"about_ca_topic_score_codex":0.0003155815,"about_ca_topic_score_gemma":0.00007660534,"teacher_disagreement_score":0.08857189,"about_ca_system_score_codex":0.000040281357,"about_ca_system_score_gemma":0.00007984074,"threshold_uncertainty_score":0.9999611},"labels":[],"label_agreement":null},{"id":"W1987836112","doi":"10.1016/j.molcel.2013.11.013","title":"Identification of a Major Determinant for Serine-Threonine Kinase Phosphoacceptor Specificity","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health; National Institute of General Medical Sciences; Wellcome Trust","keywords":"Threonine; Serine; Kinase; Biochemistry; Phosphorylation; Biology; Protein-Serine-Threonine Kinases; Residue (chemistry); Protein phosphorylation; Protein kinase A","score_opus":0.005730003025985614,"score_gpt":0.22630223978135225,"score_spread":0.22057223675536664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987836112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7049148,0.00048957637,0.29382113,0.000051229537,0.00007782336,0.00034746606,0.000023048106,0.000010199219,0.00026475434],"genre_scores_gemma":[0.9953213,0.000015213475,0.0038312855,0.000092845046,0.0000789356,0.00006106451,0.0001348389,0.000028783963,0.00043575314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990159,0.000045777237,0.00031449183,0.00031921503,0.00012230486,0.00018228141],"domain_scores_gemma":[0.99920285,0.000007489146,0.00018777855,0.00040148207,0.00013294985,0.00006742406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002635696,0.0001406761,0.00015106521,0.00004404228,0.000053204043,0.000017636352,0.00015557223,0.000104041625,0.000025800151],"category_scores_gemma":[0.00007246261,0.00014453902,0.00015230528,0.00007529799,0.000039720326,0.0000032917117,0.000053840842,0.000037688016,0.0000074001637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082078084,0.000069974776,0.00006538724,0.000093792696,0.000010833348,0.0000014593676,0.000009871976,0.00018977535,0.9954682,0.0003518486,0.00010871479,0.0035480845],"study_design_scores_gemma":[0.0007296791,0.00017190885,0.00015900303,0.000012667963,0.000023127079,0.0000020038824,0.000008937818,0.0018598136,0.9718208,0.00016744187,0.02487928,0.00016535785],"about_ca_topic_score_codex":0.000005897527,"about_ca_topic_score_gemma":0.0000042388556,"teacher_disagreement_score":0.2904065,"about_ca_system_score_codex":0.000009775037,"about_ca_system_score_gemma":0.000027284723,"threshold_uncertainty_score":0.58941305},"labels":[],"label_agreement":null},{"id":"W1988068862","doi":"10.1016/j.molcel.2005.07.007","title":"Firing up Mitochondrial Activities with PTPMT1","year":2005,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Biology; Protein tyrosine phosphatase; Mitochondrion; Function (biology); Mitochondrial DNA; mitochondrial fusion; Computational biology; Cell biology; Genetics; Phosphorylation; Gene","score_opus":0.0050224290352970415,"score_gpt":0.20064769854831108,"score_spread":0.19562526951301404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988068862","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.056354094,0.37387222,0.0567255,0.427905,0.00993078,0.0103756515,0.00370375,0.000933556,0.060199466],"genre_scores_gemma":[0.055789962,0.0004773827,0.021246804,0.8174304,0.025201552,0.000807214,0.014163685,0.0011133896,0.06376966],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976675,0.00009937443,0.0002547447,0.00091236364,0.00042140053,0.0006445966],"domain_scores_gemma":[0.9985395,0.000014325659,0.00021156901,0.0010881419,0.000063675914,0.0000827572],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000047842193,0.0006035164,0.00037720913,0.000088376975,0.00008877817,0.00010384505,0.0005562199,0.00089272606,0.000087857494],"category_scores_gemma":[0.000026629132,0.0005771668,0.00023281242,0.000087626155,0.0001507867,0.000006281768,0.00026265456,0.00085364067,0.000059488117],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097205164,0.000024181521,0.0000055646206,0.00011909098,0.000106696265,0.00040528132,0.000011622842,0.0000687412,0.2629326,0.000007049798,0.7348625,0.0013594697],"study_design_scores_gemma":[0.00044429832,0.00016024862,0.0000010543193,0.000032860604,0.00005392458,0.00002387715,0.0000021359604,0.0000023445875,0.49112374,0.000012385789,0.50774246,0.00040066591],"about_ca_topic_score_codex":0.000022302987,"about_ca_topic_score_gemma":0.000013908097,"teacher_disagreement_score":0.38952535,"about_ca_system_score_codex":0.000042614756,"about_ca_system_score_gemma":0.00020136856,"threshold_uncertainty_score":0.999668},"labels":[],"label_agreement":null},{"id":"W1988148111","doi":"10.1016/j.molcel.2012.07.004","title":"Cohesin Association to Replication Sites Depends on Rad50 and Promotes Fork Restart","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":127,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Friedrich Miescher Institute for Biomedical Research; Agence Nationale de la Recherche; Canadian Institutes of Health Research; Alberta Innovates - Health Solutions","keywords":"Cohesin; Biology; Separase; Establishment of sister chromatid cohesion; Sister chromatids; Cell biology; Chromatid; DNA replication; Genetics; Control of chromosome duplication; Origin recognition complex; Chromosome segregation; DNA; Eukaryotic DNA replication; Chromosome; Gene; Chromatin","score_opus":0.008186497826625803,"score_gpt":0.23609972043329336,"score_spread":0.22791322260666755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988148111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936788,0.0003418567,0.0022525042,0.00033488974,0.000063892185,0.00030747184,0.000006792209,0.000026606549,0.0029871652],"genre_scores_gemma":[0.99319977,0.000014831765,0.004213997,0.00079640944,0.00009026942,0.00004403488,0.000110429835,0.000029806683,0.0015004509],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990264,0.000074209944,0.00012532565,0.00034237347,0.00016469364,0.0002669572],"domain_scores_gemma":[0.9992701,0.000012572322,0.00007606743,0.00048642143,0.000048836147,0.000106047235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038031177,0.00012603911,0.00009357246,0.000039494647,0.00005249306,0.000025541158,0.00008965599,0.00014977917,0.00000838523],"category_scores_gemma":[0.00022935153,0.00013171983,0.000046663616,0.000074537056,0.000007802741,0.0000047495023,0.00007734378,0.000058604168,0.000046195484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002679358,0.000068320805,0.0049353805,0.00001009561,0.000013784404,0.0000012670566,0.00005054816,0.0000051234356,0.9919329,0.00018205206,0.0013974893,0.0013762093],"study_design_scores_gemma":[0.00020327237,0.00027414397,0.0019577371,0.000005810722,0.00001793789,0.0000026731277,0.000012673344,0.000019909245,0.9731151,0.00012559994,0.024111237,0.00015394187],"about_ca_topic_score_codex":0.000004832393,"about_ca_topic_score_gemma":0.000003939881,"teacher_disagreement_score":0.022713747,"about_ca_system_score_codex":0.000039757517,"about_ca_system_score_gemma":0.000014360837,"threshold_uncertainty_score":0.5371379},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W1988528648","doi":"10.1016/j.molcel.2014.04.015","title":"Rhythmic U2af26 Alternative Splicing Controls PERIOD1 Stability and the Circadian Clock in Mice","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Deutsche Forschungsgemeinschaft","keywords":"Biology; Timeless; Circadian rhythm; Alternative splicing; Circadian clock; RNA splicing; Oscillating gene; PER2; Bacterial circadian rhythms; Cell biology; Untranslated region; Genetics; CLOCK; Period (music); Messenger RNA; Gene; Neuroscience; RNA","score_opus":0.01015381741928384,"score_gpt":0.21551401330613354,"score_spread":0.2053601958868497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988528648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98202103,0.00054333097,0.0013569525,0.00072811206,0.00013636299,0.00056114845,0.0000058738055,0.000024999505,0.0146221975],"genre_scores_gemma":[0.9975567,0.000038850194,0.00004496049,0.0021095728,0.000053719497,0.000039109458,6.99053e-7,0.000022040704,0.00013438832],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818325,0.0005223021,0.00023773381,0.0004931639,0.0001954379,0.00036811378],"domain_scores_gemma":[0.9990327,0.0003925923,0.00008822545,0.00034785323,0.000019182415,0.000119463904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005530018,0.00017065911,0.00026333224,0.00006948525,0.00011826911,0.00008236373,0.00018905234,0.000066998095,0.000031188174],"category_scores_gemma":[0.00039077664,0.00013612342,0.00007880808,0.00017500091,0.00030943993,0.00007540386,0.000074565105,0.00029113662,0.00007144325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098281904,0.000042479274,0.0013030642,0.000031544518,0.0000036974436,0.00010895121,0.0030777247,0.00014000722,0.945774,0.04792034,0.000010390179,0.0014895141],"study_design_scores_gemma":[0.0035620907,0.000037560876,0.0022530686,0.000021127216,0.000014136788,0.00004271156,0.00013025818,0.010330429,0.9769321,0.0014514403,0.004993681,0.00023140687],"about_ca_topic_score_codex":0.00021672898,"about_ca_topic_score_gemma":0.00004484872,"teacher_disagreement_score":0.0464689,"about_ca_system_score_codex":0.000050477112,"about_ca_system_score_gemma":0.00003461795,"threshold_uncertainty_score":0.5550952},"labels":[],"label_agreement":null},{"id":"W1989248286","doi":"10.1016/j.molcel.2010.06.009","title":"Hyperaccurate and Error-Prone Ribosomes Exploit Distinct Mechanisms during tRNA Selection","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":113,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Howard Hughes Medical Institute","keywords":"Proofreading; Biology; Ribosome; Transfer RNA; Genetics; Ribosomal protein; Ribosomal RNA; Translation (biology); Selection (genetic algorithm); Protein subunit; Gene; Computational biology; RNA; Polymerase; Messenger RNA","score_opus":0.006606475086682061,"score_gpt":0.21193039965425575,"score_spread":0.2053239245675737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989248286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97716254,0.00021765486,0.020776609,0.00008534907,0.00017579208,0.00023899644,0.0000078084895,0.000035897912,0.0012993555],"genre_scores_gemma":[0.9918201,0.00004916015,0.0064769555,0.000054117718,0.000100470745,0.000029983506,0.00002721275,0.0000502598,0.00139174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998867,0.00007336434,0.00016086458,0.00046965264,0.00013562878,0.00029351303],"domain_scores_gemma":[0.999436,0.0000069303696,0.00008189829,0.00030248798,0.000046904745,0.00012575595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001495372,0.00021549764,0.00015109408,0.00005162172,0.0001607936,0.00004709141,0.00015722025,0.00020919257,0.000064969834],"category_scores_gemma":[0.00004485286,0.00021833819,0.000080753984,0.00008177234,0.000042307125,0.0000076697015,0.00009933928,0.00015865662,0.000024706791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005306804,0.00003373449,0.00013074321,0.000027434298,0.000018601278,0.000020581603,0.000018786006,0.0000060653506,0.9970054,0.00036859527,0.000013591429,0.0023033815],"study_design_scores_gemma":[0.00046655885,0.000136601,0.0005084929,0.000006951186,0.000024722864,0.000047037298,0.000038929382,0.000064144486,0.99491984,0.00067913666,0.002824346,0.00028324858],"about_ca_topic_score_codex":0.000016196087,"about_ca_topic_score_gemma":0.00003007095,"teacher_disagreement_score":0.014657563,"about_ca_system_score_codex":0.000006687861,"about_ca_system_score_gemma":0.000025675788,"threshold_uncertainty_score":0.8903573},"labels":[],"label_agreement":null},{"id":"W1990218982","doi":"10.1016/j.molcel.2012.01.030","title":"Differences in the Mechanisms of Proapoptotic BH3 Proteins Binding to Bcl-XL and Bcl-2 Quantified in Live MCF-7 Cells","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Bcl-xL; Biology; In vitro; Apoptosis; Cell biology; Förster resonance energy transfer; Cancer cell; Mitochondrion; Binding protein; Plasma protein binding; Programmed cell death; Puma; Fluorescence; Biochemistry; Cancer; Gene; Genetics","score_opus":0.013005167950585273,"score_gpt":0.22119195725055535,"score_spread":0.2081867892999701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990218982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98943746,0.00060127175,0.00861267,0.00006866322,0.00009273833,0.0008371837,0.0000047427443,0.0000038794724,0.00034141005],"genre_scores_gemma":[0.9973759,0.0000729535,0.00213862,0.00008651367,0.000025756995,0.00006390506,0.000020618,0.000017768054,0.00019798124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99888116,0.00013877828,0.00023799053,0.0002720185,0.00017027008,0.00029979623],"domain_scores_gemma":[0.9995562,0.000012376576,0.0000828569,0.00025966208,0.000023726203,0.00006516844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004144072,0.00016008124,0.00017603142,0.0001065049,0.000036631383,0.000020918367,0.00016680319,0.00014515175,0.000009338147],"category_scores_gemma":[0.000018486748,0.000119798795,0.000052365212,0.00016595694,0.00003032373,0.000005606608,0.00009735197,0.00009140985,0.000007592027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027109478,0.00015352595,0.0005850564,0.000056152145,0.0000067178285,0.0000043810946,0.0006272196,0.000029861767,0.9970399,0.00079508557,0.000008215971,0.0006667811],"study_design_scores_gemma":[0.00040074173,0.00025037082,0.002544622,0.0000376509,0.00001385346,0.0000030684625,0.0005546301,0.00013210287,0.9953705,0.00029437162,0.00022497408,0.00017307908],"about_ca_topic_score_codex":0.000072695686,"about_ca_topic_score_gemma":0.000048610254,"teacher_disagreement_score":0.007938443,"about_ca_system_score_codex":0.0000105427225,"about_ca_system_score_gemma":0.000020763751,"threshold_uncertainty_score":0.4885253},"labels":[],"label_agreement":null},{"id":"W1990529394","doi":"10.1016/j.molcel.2008.02.009","title":"“Unraveling the Tail” of How SRPK1 Phosphorylates ASF/SF2","year":2008,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institutes of Health; W. M. Keck Foundation","keywords":"Spliceosome; Biology; Kinase; Phosphorylation; Biochemistry; RNA; Gene; RNA splicing","score_opus":0.009245961028016838,"score_gpt":0.21654389316755177,"score_spread":0.20729793213953493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990529394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6006271,0.04750057,0.0075373123,0.3238735,0.00077910227,0.0019137828,0.00019928593,0.000065437365,0.017503861],"genre_scores_gemma":[0.56655586,0.0065324996,0.00176493,0.32650867,0.0034683151,0.00015022924,0.002296431,0.00048817918,0.09223492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777997,0.00017985227,0.00027580615,0.0005869067,0.00053993333,0.0006375614],"domain_scores_gemma":[0.99843246,0.000033848777,0.00021659459,0.0010472919,0.00019007412,0.00007971557],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021419184,0.00038813666,0.00035695365,0.00008204345,0.00013753041,0.000057163616,0.00081596826,0.0007984901,0.000029210833],"category_scores_gemma":[0.00009868942,0.0002975639,0.00041569726,0.0001402261,0.00023367838,0.0000024585452,0.00029148415,0.001041891,0.00002647145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014314617,0.000014188779,0.000030342211,0.00008223411,0.0000777234,0.0002596445,0.000017643857,0.000029871186,0.5744447,0.0000014550127,0.42470595,0.00032193193],"study_design_scores_gemma":[0.00019170546,0.0001167174,0.0000064883457,0.000022743405,0.000024312687,0.000018941615,0.000017581946,0.000046387886,0.5127612,0.000011023128,0.48656946,0.00021343972],"about_ca_topic_score_codex":0.00007952326,"about_ca_topic_score_gemma":0.0000037840987,"teacher_disagreement_score":0.07473106,"about_ca_system_score_codex":0.000020254209,"about_ca_system_score_gemma":0.00019436875,"threshold_uncertainty_score":0.99994767},"labels":[],"label_agreement":null},{"id":"W1990955843","doi":"10.1016/j.molcel.2010.08.015","title":"Elevated Histone Expression Promotes Life Span Extension","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":439,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of General Medical Sciences; National Cancer Institute; Cancer Center, University of Colorado; National Institutes of Health","keywords":"Biology; Histone; Histone code; Chromatin; Histone methyltransferase; Histone H2A; Histone H1; Cell biology; Chromatin remodeling; Acetylation; Histone H3; Histone-modifying enzymes; Genetics; Nucleosome; DNA; Gene","score_opus":0.004004130491097193,"score_gpt":0.2113743994227132,"score_spread":0.207370268931616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990955843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930906,0.00030277533,0.0038452486,0.00009849919,0.00025649706,0.00018634918,0.000007779347,0.000025865185,0.0021863836],"genre_scores_gemma":[0.9920229,0.000028396647,0.0064667817,0.00031376368,0.00009769153,0.000012830802,0.00020387939,0.000050003906,0.00080380635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896073,0.00003381199,0.00019439512,0.0004136755,0.00013636873,0.00026103246],"domain_scores_gemma":[0.9990248,0.0000035858332,0.000095694384,0.00062899257,0.000085960375,0.00016097179],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116055,0.00018774743,0.00013297092,0.000036443576,0.00008361585,0.000028385772,0.00022705949,0.00023605488,0.000059954633],"category_scores_gemma":[0.00006931046,0.00018191624,0.00009783862,0.00005990639,0.00005501867,0.000002154672,0.00016483974,0.00018364235,0.000041766747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019266103,0.000096665055,0.00014782694,0.000017175935,0.00000776819,0.0000139873455,0.000018789407,0.000058665824,0.9986087,0.00003748307,0.00069875835,0.0002749001],"study_design_scores_gemma":[0.0004129004,0.00011751698,0.0004486094,0.000006559136,0.000013093065,0.000009921784,0.000013603727,0.00094979134,0.9841959,0.00012765036,0.013462347,0.0002420913],"about_ca_topic_score_codex":0.00001043763,"about_ca_topic_score_gemma":0.00000990544,"teacher_disagreement_score":0.014412798,"about_ca_system_score_codex":0.0000074282043,"about_ca_system_score_gemma":0.00007053258,"threshold_uncertainty_score":0.7418329},"labels":[],"label_agreement":null},{"id":"W1991360753","doi":"10.1016/j.molcel.2012.11.013","title":"Latent Regulatory Potential of Human-Specific Repetitive Elements","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; University of Cambridge; Cancer Research UK; Cancer Research UK Cambridge Institute, University of Cambridge; Wellcome Trust; University of Pittsburgh; Cancer Research Institute","keywords":"Biology; Epigenetics; Transposable element; Genetics; DNA methylation; Genome; Germline; Human genome; CpG site; Retrotransposon; Histone; Gene; Regulation of gene expression; Somatic cell; Regulatory sequence; Lineage (genetic); Human genetics; Gene expression","score_opus":0.012606377318455837,"score_gpt":0.20255581548191243,"score_spread":0.18994943816345658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991360753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99469197,0.0004421887,0.000018474575,0.00008201266,0.00009768776,0.00009653293,0.000016611102,0.000013858536,0.0045406697],"genre_scores_gemma":[0.99920315,0.000014074735,0.00016780962,0.000046569166,0.000114949005,0.000004983056,0.00005573862,7.6838126e-7,0.0003919907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99932826,0.00004001347,0.00016203936,0.00012468846,0.00016361172,0.00018139013],"domain_scores_gemma":[0.99975747,0.000007312241,0.00007278646,0.00005770301,0.000037747366,0.00006701167],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009034875,0.00007133378,0.00008171644,0.0000062730114,0.000075680764,0.000008392938,0.00009615675,0.000044653432,0.0009196393],"category_scores_gemma":[0.000001976724,0.000031529307,0.00008406327,0.000093138784,0.00002665509,0.000029900366,0.000052330462,0.000039361985,0.000047497717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000025407976,0.00013427231,0.0048563587,0.0000022951594,0.0000062470704,0.0000023438038,0.00003656389,0.0000035478183,0.99207336,0.00084530754,0.00009955639,0.0019376109],"study_design_scores_gemma":[0.00016332023,0.00013853417,0.36539248,0.000007295129,0.000017654109,0.0000021347466,0.00006994735,0.0000055167366,0.6207484,0.0004430692,0.012875475,0.0001361339],"about_ca_topic_score_codex":0.000019837373,"about_ca_topic_score_gemma":0.0000051588495,"teacher_disagreement_score":0.37132493,"about_ca_system_score_codex":0.000010403584,"about_ca_system_score_gemma":0.000002033305,"threshold_uncertainty_score":0.9999937},"labels":[],"label_agreement":null},{"id":"W1991714991","doi":"10.1016/j.molcel.2005.06.028","title":"Regulation of Smurf2 Ubiquitin Ligase Activity by Anchoring the E2 to the HECT Domain","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":279,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"Ubiquitin ligase; Ubiquitin; Biology; Ubiquitin-Protein Ligases; DNA ligase; Cell biology; Ubiquitin-conjugating enzyme; NEDD4; Signal transduction; HEK 293 cells; Receptor; Enzyme; Biochemistry; Gene","score_opus":0.004501579249315568,"score_gpt":0.22058462572430956,"score_spread":0.216083046474994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991714991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9861352,0.0013209877,0.010207372,0.0008953987,0.000046415185,0.0002731871,0.000020183657,0.000012289496,0.0010890084],"genre_scores_gemma":[0.9980093,0.000009566327,0.00071729574,0.0005471976,0.00019190554,0.00003243993,0.000033461187,0.000025584934,0.00043324227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990233,0.00014184555,0.00015749484,0.0002720119,0.00019241442,0.00021289925],"domain_scores_gemma":[0.99917215,0.00001951283,0.00009184673,0.00059775874,0.00004940157,0.000069333284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026158566,0.0001392705,0.00009856445,0.000019943076,0.00010596938,0.000024686116,0.0003144169,0.0000761503,0.00001963279],"category_scores_gemma":[0.000054694847,0.00009917006,0.000106382824,0.00010390136,0.00005674197,0.0000033570304,0.00013264247,0.00007962864,0.000016933882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053943695,0.00007371764,0.00012130263,0.000011447968,0.000018716866,0.0000011470961,0.00008496835,0.0023884866,0.98809254,0.000016167109,0.005458405,0.0036791258],"study_design_scores_gemma":[0.00018548561,0.000063320214,0.0004612181,0.000009503317,0.000017584001,0.0000013679826,0.000026031566,0.00007270023,0.90374845,0.000022346994,0.09527983,0.00011214473],"about_ca_topic_score_codex":0.000020043804,"about_ca_topic_score_gemma":0.000020372006,"teacher_disagreement_score":0.08982143,"about_ca_system_score_codex":0.000017734172,"about_ca_system_score_gemma":0.00004455903,"threshold_uncertainty_score":0.40440378},"labels":[],"label_agreement":null},{"id":"W1991841649","doi":"10.1016/s1097-2765(01)00173-3","title":"Interaction of the Fanconi Anemia Proteins and BRCA1 in a Common Pathway","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1209,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute","keywords":"FANCD2; FANCA; Fanconi anemia; Biology; DNA repair; Genetics; DNA damage; Nuclear protein; Cancer research; Molecular biology; Cell biology; DNA; Gene; Transcription factor","score_opus":0.005318274518032255,"score_gpt":0.2139848841268177,"score_spread":0.20866660960878544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991841649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497646,0.0003077802,0.0005134022,0.000064994616,0.00006071808,0.00026517405,0.0000026137225,0.0000051376423,0.0038037149],"genre_scores_gemma":[0.9991148,0.00003108517,0.00032647615,0.00014852396,0.000013582982,0.000019535959,0.000008525801,0.000014121725,0.00032330825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993908,0.00007338559,0.00014120228,0.00019054332,0.000081267295,0.00012281742],"domain_scores_gemma":[0.99957687,0.000003203559,0.0000690936,0.00030395933,0.000020413392,0.000026485475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009426976,0.000089843794,0.00009318817,0.000025440717,0.000019066158,0.0000079248075,0.000118381846,0.00009253881,0.000007689875],"category_scores_gemma":[0.000014775317,0.00007465273,0.00004768067,0.00007964301,0.000034360637,0.000002300288,0.00011651003,0.00008562891,0.0000018401483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029079818,0.00005324041,0.0029558744,0.000019541325,0.0000040858604,0.000015174205,0.000050169678,0.00003516699,0.9948728,0.000047494894,0.000020169222,0.0018971864],"study_design_scores_gemma":[0.00037436277,0.00012324183,0.0011474403,0.000019388886,0.000004722799,0.00002006411,0.00005557547,0.00007336855,0.99343395,0.0001784207,0.0044863843,0.00008308769],"about_ca_topic_score_codex":0.00005758313,"about_ca_topic_score_gemma":0.000119487624,"teacher_disagreement_score":0.004466215,"about_ca_system_score_codex":0.000010938538,"about_ca_system_score_gemma":0.000025383768,"threshold_uncertainty_score":0.304425},"labels":[],"label_agreement":null},{"id":"W1992965842","doi":"10.1016/j.molcel.2011.03.006","title":"Dot1 and Histone H3K79 Methylation in Natural Telomeric and HM Silencing","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":117,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research","keywords":"URA3; Biology; Gene silencing; DNA methylation; Methylation; Epigenetics; Genetics; Position effect; Saccharomyces cerevisiae; Computational biology; Gene; Gene expression","score_opus":0.006704460728492904,"score_gpt":0.21995945337524528,"score_spread":0.21325499264675238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992965842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915496,0.003998195,0.00110099,0.000018956469,0.000038769376,0.00007275788,0.0000023896255,0.000006441279,0.003211901],"genre_scores_gemma":[0.99666625,0.0002275197,0.0024092544,0.00015165252,0.000012335915,0.0000058102883,0.000037017126,0.000012162414,0.00047798865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99927896,0.00006420409,0.00013416304,0.00029826802,0.0000796672,0.00014474735],"domain_scores_gemma":[0.9996914,0.0000052760884,0.000053204683,0.0001715032,0.000020447706,0.00005813412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001157201,0.00011302514,0.00011937251,0.000088053115,0.000029582003,0.000009471595,0.00006828257,0.00008557577,0.000015889178],"category_scores_gemma":[0.000029252953,0.00010947519,0.000033849035,0.000095927,0.0000408347,0.0000040261157,0.00009343653,0.00007756072,0.0000031657712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002283213,0.000018433248,0.0012436656,0.0000105055515,0.000011450462,0.000021676307,0.00014278013,0.000007943554,0.9964575,0.0000050103254,0.0001722885,0.0018859146],"study_design_scores_gemma":[0.00032171884,0.00004387126,0.003043498,0.0000070504634,0.000020852782,0.000009743014,0.00007370747,0.00038939092,0.99432397,0.000040439612,0.0015714242,0.00015436437],"about_ca_topic_score_codex":0.00008534645,"about_ca_topic_score_gemma":0.000028515436,"teacher_disagreement_score":0.005116659,"about_ca_system_score_codex":0.000009453316,"about_ca_system_score_gemma":0.000014477069,"threshold_uncertainty_score":0.44642687},"labels":[],"label_agreement":null},{"id":"W1993290412","doi":"10.1016/j.molcel.2011.10.007","title":"Protein Phosphatase 2A Controls the Order and Dynamics of Cell-Cycle Transitions","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Agence Nationale de la Recherche","keywords":"Biology; Dynamics (music); Phosphatase; Cell cycle; Cell biology; Protein phosphatase 2; Cell; Order (exchange); Cell Cycle Protein; Computational biology; Genetics; Phosphorylation","score_opus":0.004275149265240805,"score_gpt":0.1861424214394728,"score_spread":0.181867272174232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993290412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95221525,0.0020688376,0.03959351,0.00011023402,0.0000328579,0.0005293572,0.00014431454,0.000007934363,0.005297691],"genre_scores_gemma":[0.99656254,0.00010104629,0.002479883,0.00027465477,0.000013456678,0.00004198242,0.00017043592,0.000025056039,0.0003309454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992717,0.00005498204,0.00017515471,0.00023342413,0.000077455494,0.00018729907],"domain_scores_gemma":[0.9994164,0.0000036704546,0.00007374145,0.0003768656,0.00007091215,0.000058378042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000943353,0.00014124736,0.00012560732,0.000020550331,0.00006392069,0.000010834173,0.0001664349,0.00011534802,0.00002919455],"category_scores_gemma":[0.000008936744,0.00011524607,0.00008116252,0.000070756236,0.00012359246,0.0000028246595,0.000059961414,0.00008532173,0.000004187374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051789186,0.00015078524,0.000059168895,0.000037611022,0.000029541801,0.000008193393,0.00012070172,0.000023154584,0.99802184,0.0009936454,0.000072189905,0.00043137683],"study_design_scores_gemma":[0.0007472056,0.00018490916,0.00006456202,0.000007756641,0.000058330963,0.0000051598568,0.00012929415,0.00080618827,0.99581987,0.00024676273,0.0017742818,0.00015565859],"about_ca_topic_score_codex":0.00006441796,"about_ca_topic_score_gemma":0.000058977388,"teacher_disagreement_score":0.044347275,"about_ca_system_score_codex":0.000005334735,"about_ca_system_score_gemma":0.000042383446,"threshold_uncertainty_score":0.46995983},"labels":[],"label_agreement":null},{"id":"W1993418657","doi":"10.1016/j.molcel.2012.02.007","title":"The Sam68 STAR RNA-Binding Protein Regulates mTOR Alternative Splicing during Adipogenesis","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; McGill University; Université Laval; Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Biology; Adipogenesis; RNA-binding protein; RNA splicing; Alternative splicing; RNA; Cell biology; PI3K/AKT/mTOR pathway; Star (game theory); Computational biology; Genetics; Messenger RNA; Signal transduction; Gene; Physics","score_opus":0.008283015797166175,"score_gpt":0.23654804242711547,"score_spread":0.2282650266299493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993418657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99493074,0.0027581882,0.00046425778,0.000107742046,0.00010087194,0.00041921297,0.000006895284,0.000018430488,0.0011936647],"genre_scores_gemma":[0.9907755,0.00011372949,0.00067676214,0.00004845542,0.0002794154,0.000069336755,0.000023088845,0.000056077944,0.007957622],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981804,0.00014674108,0.000218986,0.0003341864,0.00030864004,0.00081105425],"domain_scores_gemma":[0.9990617,0.000017966397,0.000101981284,0.00051638705,0.00007393972,0.00022801003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043266208,0.00021917159,0.00013871235,0.000054204727,0.0004228485,0.00008297152,0.0003702711,0.000107581036,0.000015451902],"category_scores_gemma":[0.000095435156,0.00017069887,0.00014178824,0.00012451959,0.00008312889,0.000011145518,0.00025911405,0.00015802242,0.000046879544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070416194,0.0000338217,0.00062761904,0.000029419623,0.00006751233,0.000014512198,0.000054933713,0.000043689586,0.9981157,0.000070145026,0.00007413255,0.00079805305],"study_design_scores_gemma":[0.00037968752,0.00008351256,0.0005163991,0.00002434545,0.000014633471,0.0000074213394,0.00012104572,0.00009309491,0.9944243,0.000016919614,0.004096187,0.0002224399],"about_ca_topic_score_codex":0.00006805704,"about_ca_topic_score_gemma":0.000010930436,"teacher_disagreement_score":0.0067639574,"about_ca_system_score_codex":0.00005135843,"about_ca_system_score_gemma":0.000042929427,"threshold_uncertainty_score":0.69608974},"labels":[],"label_agreement":null},{"id":"W1994034344","doi":"10.1016/j.molcel.2014.06.010","title":"Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":247,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of General Medical Sciences; National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; Imprinting (psychology); Mechanism (biology); RNA; Cell biology; Computational biology; Virology; Genetics; Gene","score_opus":0.004215756988221338,"score_gpt":0.19941087202406982,"score_spread":0.1951951150358485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994034344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9619954,0.00018340258,0.02350043,0.00016391261,0.0002412554,0.00019731902,0.0000020407138,0.00003179989,0.013684433],"genre_scores_gemma":[0.99747974,0.000002793295,0.0001246038,0.0005705495,0.000007430482,0.000008537403,0.000007626851,0.000024387082,0.0017743066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871254,0.00050227676,0.00024860157,0.0002166556,0.000058189722,0.0002617537],"domain_scores_gemma":[0.99929976,0.00005681446,0.00016406098,0.00039389325,0.00007244749,0.000013045325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022695053,0.00016216953,0.0001970188,0.00006915283,0.0001018817,0.000012014986,0.0002720557,0.00017869359,0.00025447077],"category_scores_gemma":[0.00009497876,0.0001253172,0.000197449,0.00009007843,0.00009524283,0.000032338154,0.00014463208,0.00024959337,0.00024210183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010208643,0.000051615803,0.00000658239,0.000016045376,0.000049542523,0.0000028369184,0.00013565984,0.00002779642,0.9888547,0.009566351,0.000036108486,0.0011506921],"study_design_scores_gemma":[0.0006114888,0.00023678405,0.000051942057,0.0000315869,0.00003103915,0.000013996118,0.000090812435,0.000071958275,0.99322385,0.00083137985,0.004666249,0.0001389304],"about_ca_topic_score_codex":0.00009227664,"about_ca_topic_score_gemma":4.4606603e-7,"teacher_disagreement_score":0.03548436,"about_ca_system_score_codex":0.000021819154,"about_ca_system_score_gemma":0.000037870715,"threshold_uncertainty_score":0.5110287},"labels":[],"label_agreement":null},{"id":"W1996829810","doi":"10.1016/j.molcel.2005.06.034","title":"Structural Basis for the Activation of Microtubule Assembly by the EB1 and p150Glued Complex","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Dynactin; Microtubule; Dynein; Biology; Microtubule-associated protein; Cell biology; Allosteric regulation; Biophysics; Biochemistry; Enzyme","score_opus":0.008793009607798552,"score_gpt":0.23031590003166894,"score_spread":0.22152289042387038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996829810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98164517,0.0013169725,0.015375284,0.0008566169,0.000028472134,0.00041296176,0.000053224467,0.000004190529,0.0003070874],"genre_scores_gemma":[0.9972277,0.0000980375,0.0011683155,0.00093992014,0.00006153328,0.000029513592,0.00012802414,0.00001967346,0.0003272521],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993839,0.000038411064,0.0001480919,0.00019565049,0.000075052885,0.00015887762],"domain_scores_gemma":[0.99949944,0.00003209316,0.00008813293,0.00029315776,0.000060475326,0.000026715248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010505657,0.00012082634,0.000096004806,0.00001257257,0.000117857904,0.000023808232,0.00019648968,0.00008468251,0.000008274966],"category_scores_gemma":[0.000023570012,0.000078624544,0.00008626666,0.00004183389,0.00008162807,0.0000030723013,0.00007285146,0.000056503315,8.510761e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003484693,0.000015979998,0.00006456909,0.000015904165,0.000037050704,6.892027e-8,0.000040228642,0.00011251016,0.9910469,0.000051392286,0.0047690487,0.0038114837],"study_design_scores_gemma":[0.00045977565,0.00007272158,0.0003513461,0.000003368976,0.000034543005,0.000003102659,0.000053767486,0.0018774401,0.9243735,0.000015199066,0.072657086,0.00009817058],"about_ca_topic_score_codex":0.000031737327,"about_ca_topic_score_gemma":0.000015802854,"teacher_disagreement_score":0.06788804,"about_ca_system_score_codex":0.000008276494,"about_ca_system_score_gemma":0.000021488726,"threshold_uncertainty_score":0.32062158},"labels":[],"label_agreement":null},{"id":"W1997254455","doi":"10.1016/j.molcel.2011.08.014","title":"Cross-Regulation between an Alternative Splicing Activator and a Transcription Repressor Controls Neurogenesis","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":151,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Ontario Genomics Institute; Genome Canada","keywords":"Neurogenesis; Biology; Repressor; Alternative splicing; RNA splicing; Activator (genetics); Transcription factor; Transcription (linguistics); Cell biology; Gene; Regulation of gene expression; Gene isoform; Genetics; RNA","score_opus":0.025188772222913894,"score_gpt":0.2779214001474484,"score_spread":0.25273262792453455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997254455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851962,0.00028898512,0.013332121,0.000020071197,0.000022951166,0.00026350422,0.00001053571,0.000015957748,0.0008496911],"genre_scores_gemma":[0.998542,0.00002784377,0.0007637699,0.00013323958,0.000087112625,0.00001722893,0.000058193513,0.000027153452,0.00034347523],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885213,0.00012247046,0.00017048039,0.0004422905,0.0001528101,0.00025981085],"domain_scores_gemma":[0.9993588,0.0000068583795,0.00007025358,0.00032780707,0.000073871546,0.00016244467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017865028,0.00015044582,0.0001419298,0.000051466,0.000093339455,0.000053197993,0.00014466491,0.000111690766,0.000015306126],"category_scores_gemma":[0.000029426004,0.00015000172,0.00007005126,0.00005583846,0.000060757964,0.00001790747,0.000038998147,0.000082841994,0.0000029794232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001540808,0.000040685813,0.007266958,0.000010967689,0.000036441495,0.000011012441,0.00009659717,0.000032158114,0.98742306,0.000033743305,0.0000040691534,0.0048902426],"study_design_scores_gemma":[0.0007373821,0.0004302208,0.05537104,0.0000059436015,0.00003297598,0.0000035216065,0.000017029133,0.00041521853,0.94247276,0.00012768892,0.00023495915,0.00015124548],"about_ca_topic_score_codex":0.0001465804,"about_ca_topic_score_gemma":0.000007169593,"teacher_disagreement_score":0.04810408,"about_ca_system_score_codex":0.0000073192696,"about_ca_system_score_gemma":0.000020430525,"threshold_uncertainty_score":0.61168927},"labels":[],"label_agreement":null},{"id":"W1998499089","doi":"10.1016/j.molcel.2007.05.033","title":"HDAC6 Modulates Cell Motility by Altering the Acetylation Level of Cortactin","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":725,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Moffitt Cancer Center","keywords":"Biology; Cortactin; Motility; Acetylation; Cell biology; Cell; Biochemistry; Cytoskeleton; Gene","score_opus":0.028394510107132988,"score_gpt":0.2720068878713325,"score_spread":0.2436123777641995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998499089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92925125,0.00013856005,0.061149824,0.0002044343,0.000013341295,0.00012313684,0.000015081855,0.000019887833,0.009084487],"genre_scores_gemma":[0.99744016,0.0000066784773,0.0006164499,0.00036892854,0.000019307327,0.000001646348,0.0000620692,0.000013082612,0.0014716637],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991499,0.00003209234,0.00025273545,0.0001657563,0.00023612363,0.00016336815],"domain_scores_gemma":[0.9994354,0.00003204211,0.00010781148,0.00027759798,0.000072309704,0.00007483285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029885652,0.00009919118,0.0001580592,0.00005547779,0.000044864275,0.000008053824,0.000058951642,0.000058512556,0.00015811466],"category_scores_gemma":[0.000023553417,0.00007631333,0.00014056469,0.00017758379,0.000044947894,0.0000278563,0.000024850795,0.00012448213,0.00002111255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002084232,0.000127149,0.00193289,0.000054749755,0.000015966489,0.000017355696,0.000100742254,0.00010016881,0.9964926,0.000008040359,0.0004305037,0.0006989929],"study_design_scores_gemma":[0.00047954207,0.00004124415,0.0067027393,0.00003368113,0.000058955375,0.0000026025646,0.00011838186,0.0022496313,0.98948365,0.000027649176,0.0007396999,0.00006223934],"about_ca_topic_score_codex":0.000080306956,"about_ca_topic_score_gemma":0.000006777366,"teacher_disagreement_score":0.06818893,"about_ca_system_score_codex":0.000028120267,"about_ca_system_score_gemma":0.000016564843,"threshold_uncertainty_score":0.3111967},"labels":[],"label_agreement":null},{"id":"W1998645760","doi":"10.1016/j.molcel.2011.12.030","title":"Plk1-Dependent Phosphorylation of Optineurin Provides a Negative Feedback Mechanism for Mitotic Progression","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; Centre National de la Recherche Scientifique; Austrian Science Fund; Österreichischen Akademie der Wissenschaften","keywords":"Biology; Optineurin; Cytokinesis; Mitosis; Cell biology; PLK1; Mitotic exit; Phosphorylation; Phosphatase; Anaphase; Cell division; Cell cycle; Biochemistry; Mutation; Cell","score_opus":0.007493848063234898,"score_gpt":0.23853220357325985,"score_spread":0.23103835551002497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998645760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94066286,0.0008733238,0.05669337,0.000036730547,0.00016200844,0.0008699021,0.000025219033,0.00001168532,0.00066490716],"genre_scores_gemma":[0.9851588,0.000055342636,0.013880363,0.000109645924,0.00008905343,0.00011011926,0.00011380324,0.00003958681,0.00044328364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990336,0.00004762391,0.00022670795,0.00025995716,0.00013608279,0.00029608514],"domain_scores_gemma":[0.9993288,0.000010726676,0.0001656711,0.00027373908,0.00013654085,0.000084504696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014118392,0.00017079337,0.0001515528,0.000036743666,0.000046423913,0.000012281081,0.00013734736,0.00015840628,0.0000074690697],"category_scores_gemma":[0.000054591765,0.00016218811,0.00013513342,0.000053185733,0.000033297696,0.000006627737,0.000091918526,0.00006020725,0.000005597003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010290188,0.00021108829,0.00037453332,0.00011374718,0.0000311076,8.687388e-7,0.00007966385,0.0000514779,0.9973799,0.00046587776,0.00013091396,0.0010578993],"study_design_scores_gemma":[0.000756092,0.00033251327,0.00012000375,0.000023755572,0.00004966653,0.0000036253664,0.000064163396,0.00034147207,0.99702114,0.00019616481,0.0009080833,0.00018333053],"about_ca_topic_score_codex":0.000008198615,"about_ca_topic_score_gemma":0.0000032399737,"teacher_disagreement_score":0.04449595,"about_ca_system_score_codex":0.00001571276,"about_ca_system_score_gemma":0.00004225525,"threshold_uncertainty_score":0.6613839},"labels":[],"label_agreement":null},{"id":"W1999144991","doi":"10.1016/j.molcel.2011.02.013","title":"Histone Chaperones: Modulators of Chromatin Marks","year":2011,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":218,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Biology; Chromatin; Histone; Cell biology; Computational biology; Genetics; DNA","score_opus":0.01140801116696231,"score_gpt":0.25231311193735134,"score_spread":0.24090510077038904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999144991","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003374325,0.98707694,0.00089792,0.0000012887123,0.00019970545,0.00047444325,0.00007884797,0.000012026854,0.007884498],"genre_scores_gemma":[0.002873478,0.99263066,0.002062048,0.00002711761,0.00007074908,0.000054701657,0.0007595303,0.00015844057,0.0013632796],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998106,0.00011137466,0.0006941782,0.0006030916,0.00014579896,0.0003395274],"domain_scores_gemma":[0.99816966,0.000006525676,0.0005838556,0.0010579113,0.00006495841,0.000117068805],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015096155,0.00052419654,0.0010657974,0.000113339665,0.000038348902,0.000012366906,0.0006109988,0.0006407334,0.00007843683],"category_scores_gemma":[0.000017220698,0.0005036377,0.00072058145,0.00012541522,0.000109759385,0.0000014366115,0.00031402634,0.00019267279,0.000044792032],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028341361,0.0007814789,0.000006798838,0.04520827,0.0010306904,0.000088396744,0.00022721784,0.000053799886,0.100576185,0.0007863549,0.0016585398,0.84955394],"study_design_scores_gemma":[0.00021359843,0.00018747954,0.0000014362952,0.00074404874,0.00040326698,0.000025311985,0.000008481262,0.000030826213,0.0067034196,0.00003718184,0.9910524,0.00059255783],"about_ca_topic_score_codex":0.000019840048,"about_ca_topic_score_gemma":0.0000033965055,"teacher_disagreement_score":0.98939383,"about_ca_system_score_codex":0.000057563648,"about_ca_system_score_gemma":0.00033736584,"threshold_uncertainty_score":0.9997415},"labels":[],"label_agreement":null},{"id":"W1999446997","doi":"10.1016/j.molcel.2006.01.023","title":"Growth Factor Signaling Regulates Elongation of RNA Polymerase I Transcription in Mammals via UBF Phosphorylation and r-Chromatin Remodeling","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":224,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; RNA polymerase I; RNA polymerase II; Cell biology; Transcription (linguistics); Elongation factor; Ribosomal RNA; Molecular biology; RNA polymerase; Sigma factor; Polymerase; Chromatin; Transcription factor; RNA; Gene expression; Ribosome; Promoter; Gene; Biochemistry","score_opus":0.005489742840387982,"score_gpt":0.21026663283282493,"score_spread":0.20477688999243696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999446997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96492296,0.0017078904,0.0329437,0.000041127932,0.000015476524,0.0001771455,0.0000053372114,0.0000070331243,0.00017932386],"genre_scores_gemma":[0.9978577,0.000057262856,0.0017803252,0.00002278239,0.000027449849,0.0000064159676,0.00011461981,0.000019787842,0.0001136768],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999036,0.00007589906,0.00028036808,0.00025081425,0.00016147726,0.00019540847],"domain_scores_gemma":[0.999664,0.000008483031,0.00008521922,0.00013333593,0.00006524618,0.000043732383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017223426,0.000119495984,0.00012724966,0.00009212906,0.000040235347,0.000019684505,0.00006438252,0.00011457942,0.000007366634],"category_scores_gemma":[0.000019238894,0.00012718802,0.0000545812,0.00010720787,0.000035056775,0.000009974323,0.00001939488,0.000070142494,8.31246e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005838019,0.000035617802,0.0012038138,0.000055055247,0.0000055498876,0.0000050196622,0.00004012204,0.0015000569,0.995165,0.00003234375,0.0000043426962,0.0018946886],"study_design_scores_gemma":[0.00055017654,0.00009164141,0.002514056,0.000029838955,0.000006830505,0.0000021301369,0.000026494305,0.01005844,0.9862734,0.00031233326,0.000008689746,0.00012594463],"about_ca_topic_score_codex":0.00049477426,"about_ca_topic_score_gemma":0.000033467353,"teacher_disagreement_score":0.032934714,"about_ca_system_score_codex":0.00001587733,"about_ca_system_score_gemma":0.0000235021,"threshold_uncertainty_score":0.5186577},"labels":[],"label_agreement":null},{"id":"W1999497853","doi":"10.1016/s1097-2765(01)00238-6","title":"Localization of the Ribosomal Protection Protein Tet(O) on the Ribosome and the Mechanism of Tetracycline Resistance","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of General Medical Sciences","keywords":"Biology; Ribosome; Tetracycline; Elongation factor; Ribosomal RNA; Ribosomal protein; EF-Tu; Transfer RNA; A-site; Binding site; Molecular biology; Biochemistry; RNA; Antibiotics","score_opus":0.006558624030676556,"score_gpt":0.1892610834475043,"score_spread":0.18270245941682775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999497853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88873243,0.00097432255,0.101867,0.002289442,0.00009016518,0.0022102976,0.000011522934,0.000008287217,0.0038165415],"genre_scores_gemma":[0.99815005,0.000073066425,0.00021984612,0.00023635197,0.000035971414,0.00012621282,0.0000029712353,0.000020349536,0.0011351818],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877423,0.00036816098,0.00024619015,0.00022820658,0.0002418708,0.00014132417],"domain_scores_gemma":[0.9990884,0.00002284293,0.00023367541,0.00055242673,0.00008036356,0.00002229444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047696926,0.00013986116,0.00013971132,0.000021275562,0.00013975574,0.0000131153865,0.00027549703,0.00012132748,0.00001473356],"category_scores_gemma":[0.0001750878,0.00007151826,0.00011250421,0.00015575737,0.00019585872,0.0000028555005,0.00008638436,0.00010015789,0.000001822583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029241465,0.0000484179,0.000014748674,0.000034950837,0.000019842331,0.0000011300997,0.000038809423,0.00007467704,0.9861402,0.012844604,0.000019700012,0.000470525],"study_design_scores_gemma":[0.0005684328,0.00013529441,0.000027909244,0.000054570683,0.00002263596,0.0000031814584,0.000041596893,0.00018984008,0.9873061,0.0079620695,0.0036017138,0.00008666338],"about_ca_topic_score_codex":0.000020638967,"about_ca_topic_score_gemma":0.000013950482,"teacher_disagreement_score":0.109417625,"about_ca_system_score_codex":0.000006316414,"about_ca_system_score_gemma":0.000027829627,"threshold_uncertainty_score":0.29164302},"labels":[],"label_agreement":null},{"id":"W2000265219","doi":"10.1016/j.molcel.2014.07.011","title":"SIRT1-Mediated Deacetylation of CRABPII Regulates Cellular Retinoic Acid Signaling and Modulates Embryonic Stem Cell Differentiation","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Sirtuins and Resveratrol in Medicine","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"Biology; Retinoic acid; Acetylation; Embryonic stem cell; Cell biology; Cellular differentiation; Stem cell; Signal transduction; Tretinoin; Cell; Biochemistry; Gene","score_opus":0.005094326913808063,"score_gpt":0.19131216617594246,"score_spread":0.1862178392621344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000265219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98568213,0.00408247,0.008535949,0.00021745429,0.00013446527,0.00040169037,0.0000023624173,0.00006581478,0.0008776665],"genre_scores_gemma":[0.998205,0.0001154046,0.00071684207,0.00013287974,0.00010595181,0.000008534112,0.00014687517,0.000053882246,0.00051463227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826133,0.000156926,0.00044220223,0.00040081178,0.0004377556,0.00030098378],"domain_scores_gemma":[0.998903,0.00009421086,0.00026076724,0.0003995258,0.00016368416,0.00017885609],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036515534,0.00026109983,0.00048721526,0.00019447596,0.0000788117,0.000020735604,0.00008752361,0.00022252063,0.000055986016],"category_scores_gemma":[0.000047111516,0.00021692245,0.0001267036,0.00022807496,0.00009399693,0.000050033006,0.000048519953,0.00024125817,0.000011790506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007982999,0.000110967005,0.0032606982,0.000409312,0.000041185882,0.000017723221,0.0002432377,0.00047475335,0.99418813,0.000034542103,0.00005016195,0.0010894473],"study_design_scores_gemma":[0.0024584823,0.00053442235,0.0031315808,0.00017303262,0.00027844455,0.0000061071632,0.00011138109,0.047124743,0.94568145,0.000091417794,0.00021405246,0.00019489288],"about_ca_topic_score_codex":0.00001309345,"about_ca_topic_score_gemma":7.6591544e-7,"teacher_disagreement_score":0.0485067,"about_ca_system_score_codex":0.000036131656,"about_ca_system_score_gemma":0.000034127686,"threshold_uncertainty_score":0.884584},"labels":[],"label_agreement":null},{"id":"W2000832682","doi":"10.1016/j.molcel.2007.06.027","title":"Systematic Analysis of the Protein Interaction Network for the Human Transcription Machinery Reveals the Identity of the 7SK Capping Enzyme","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":441,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université Laval; University of Toronto; Université de Sherbrooke; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biology; Transcription (linguistics); Transcription factor; Computational biology; Interaction network; Cell biology; Genetics; Gene","score_opus":0.009670997196912508,"score_gpt":0.25250915861579626,"score_spread":0.24283816141888376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000832682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90021384,0.001276818,0.09600662,0.00023640157,0.00023378702,0.0017150536,0.000010858994,0.0000042528936,0.0003023717],"genre_scores_gemma":[0.9990934,0.000007892244,0.00008196463,0.00020480026,0.00007269459,0.00007572826,0.000019765446,0.000011572798,0.0004321932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987375,0.00028988364,0.00044335355,0.00015997872,0.00022432134,0.00014496714],"domain_scores_gemma":[0.99876946,0.000037570207,0.00043174508,0.0006415719,0.000103250335,0.000016418147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012737518,0.00011112698,0.00018022918,0.000034261862,0.00022591991,0.000023457076,0.0004419182,0.00008057695,0.0000055643386],"category_scores_gemma":[0.00011671974,0.000052147403,0.00049275515,0.000409004,0.00008448788,0.0000067959377,0.00006742844,0.0001090908,3.2396457e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014751537,0.000025457535,0.0002296786,0.0003750262,0.0002571601,9.7792466e-8,0.000084944724,0.001692017,0.99660575,0.0004934532,0.00018298697,0.000038685856],"study_design_scores_gemma":[0.00016504683,0.000033925993,0.0020857141,0.0002270928,0.00066005625,8.6263265e-7,0.0001709727,0.00078609696,0.9951729,0.00016765125,0.0004550564,0.00007460625],"about_ca_topic_score_codex":0.00008422919,"about_ca_topic_score_gemma":0.00024483254,"teacher_disagreement_score":0.09887955,"about_ca_system_score_codex":0.000017647646,"about_ca_system_score_gemma":0.000017798024,"threshold_uncertainty_score":0.21265094},"labels":[],"label_agreement":null},{"id":"W2001499126","doi":"10.1016/j.molcel.2012.01.011","title":"OTUB1 Co-opts Lys48-Linked Ubiquitin Recognition to Suppress E2 Enzyme Function","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":201,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research","keywords":"Biology; Ubiquitin; Enzyme; Ubiquitin-conjugating enzyme; Function (biology); Deubiquitinating enzyme; Ubiquitin-Protein Ligases; Cell biology; Ubiquitin ligase; Biochemistry; Gene","score_opus":0.0186377062375681,"score_gpt":0.2484181627170809,"score_spread":0.22978045647951278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001499126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9512095,0.0009239375,0.02090271,0.00016881012,0.00044934134,0.00060212193,0.00009418684,0.000060886236,0.025588492],"genre_scores_gemma":[0.9933274,0.000028583137,0.0015778663,0.0020863675,0.0005528068,0.00013722833,0.0009986497,0.000064859334,0.0012262786],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828684,0.00018098454,0.00025905363,0.00044599854,0.000232798,0.000594333],"domain_scores_gemma":[0.99898547,0.0000124906965,0.0000873815,0.00047627804,0.00010281046,0.00033555753],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035214305,0.00026852387,0.00018031451,0.000085170184,0.00010861768,0.00004404916,0.00019932006,0.00028520654,0.00032936165],"category_scores_gemma":[0.000067116474,0.0002897333,0.00015607997,0.00012567666,0.0000372064,0.000011198327,0.00012106383,0.00015682926,0.0007273129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013825779,0.00014107881,0.00022197576,0.000041260046,0.000029559778,0.00000652903,0.00009987502,0.000017974084,0.9884797,0.00003577878,0.005362235,0.005425818],"study_design_scores_gemma":[0.0004797804,0.00032155617,0.00023941266,0.000011246278,0.000036352125,0.00001016874,0.00005205497,0.000009222666,0.79433876,0.000057480127,0.20412214,0.00032180507],"about_ca_topic_score_codex":0.00001258261,"about_ca_topic_score_gemma":0.00000344195,"teacher_disagreement_score":0.1987599,"about_ca_system_score_codex":0.000023913242,"about_ca_system_score_gemma":0.000039445626,"threshold_uncertainty_score":0.9999555},"labels":[],"label_agreement":null},{"id":"W2003094512","doi":"10.1016/j.molcel.2014.11.005","title":"Pores of No Return","year":2014,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; Computational biology; Evolutionary biology","score_opus":0.0074250844598853245,"score_gpt":0.20998359460568905,"score_spread":0.20255851014580373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003094512","genre_codex":"other","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021155512,0.0069715506,0.055685338,0.19841638,0.012062257,0.0020287014,0.0003735829,0.00014290666,0.70316374],"genre_scores_gemma":[0.008241079,0.00015733896,0.0030087254,0.9204304,0.0064949277,0.000037899634,0.0043193894,0.00017785297,0.057132393],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985284,0.00019756507,0.00029738096,0.00050484174,0.00019290362,0.00027886967],"domain_scores_gemma":[0.99876404,0.000011762791,0.00022491919,0.00079608936,0.00015573861,0.000047452068],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010428793,0.0002788805,0.00032696116,0.00007326173,0.000024689973,0.0000109149805,0.0003137968,0.0012299707,0.00030690027],"category_scores_gemma":[0.000071094495,0.00027294995,0.00029134724,0.00005088041,0.00009292154,6.4795427e-7,0.00010365973,0.00050135085,0.00015336298],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001825945,0.000008591101,0.000013508909,0.00007702857,0.000020012316,0.000072932555,0.0000028887666,0.0000024279977,0.44366026,0.0000038030275,0.55608344,0.000036832447],"study_design_scores_gemma":[0.00021263673,0.00023482782,0.0000010317775,0.00001013325,0.00003151538,0.000017070362,8.057752e-7,0.0000035958915,0.31545037,0.000026684116,0.6838219,0.00018942462],"about_ca_topic_score_codex":0.0000108732365,"about_ca_topic_score_gemma":0.000001213211,"teacher_disagreement_score":0.722014,"about_ca_system_score_codex":0.0000060130274,"about_ca_system_score_gemma":0.00006637419,"threshold_uncertainty_score":0.9999723},"labels":[],"label_agreement":null},{"id":"W2003241548","doi":"10.1016/s1097-2765(00)80240-3","title":"A Cell Cycle–Dependent Internal Ribosome Entry Site","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":323,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Internal ribosome entry site; Biology; Mitosis; Translation (biology); EIF4E; Cell biology; Protein biosynthesis; Prophase; Ornithine decarboxylase; Ribosome; Cell cycle; Messenger RNA; Eukaryotic translation; Chromatin; Molecular biology; Biochemistry; RNA; Cell; Enzyme; Gene","score_opus":0.002301366459008361,"score_gpt":0.20008194217289998,"score_spread":0.19778057571389163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003241548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91856766,0.0025021643,0.0033076098,0.00008693133,0.00006868545,0.00016067915,0.00005667122,0.000022181535,0.075227395],"genre_scores_gemma":[0.9767608,0.0003790462,0.0006709599,0.00077284506,0.00018025607,0.000038130715,0.00020586177,0.000034993434,0.0209571],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988641,0.00004663162,0.00019594711,0.00041742928,0.0001594272,0.00031644962],"domain_scores_gemma":[0.99923277,0.0000032993048,0.00005067139,0.0005430988,0.00002657422,0.00014358755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000066465225,0.00018997701,0.0001304766,0.000033950873,0.00006267885,0.00003694811,0.00029503525,0.000119634395,0.00044155345],"category_scores_gemma":[0.0000042111474,0.00019449863,0.00013797714,0.00007956065,0.000044963697,0.000003372408,0.000100758734,0.00011649743,0.0006958694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025375739,0.00016897806,0.00022420126,0.000010616355,0.000012394468,0.000021455045,0.000028337467,0.00015612922,0.99337125,0.000031268206,0.0020119546,0.0039380444],"study_design_scores_gemma":[0.00061317655,0.000052800653,0.00037225394,0.0000033167362,0.0000264548,0.0000109578705,0.000009085681,0.00007065347,0.78894454,0.00008587598,0.20959656,0.0002143265],"about_ca_topic_score_codex":0.00004143283,"about_ca_topic_score_gemma":0.0000037277,"teacher_disagreement_score":0.2075846,"about_ca_system_score_codex":0.000008122958,"about_ca_system_score_gemma":0.00003201388,"threshold_uncertainty_score":0.89442253},"labels":[],"label_agreement":null},{"id":"W2003493907","doi":"10.1016/j.molcel.2005.02.029","title":"Structure of the p53 Binding Domain of HAUSP/USP7 Bound to Epstein-Barr Nuclear Antigen 1","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":356,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; Ontario Institute for Cancer Research; University of Toronto","funders":"","keywords":"Biology; Domain (mathematical analysis); Antigen; Cell biology; Computational biology; Virology; Genetics","score_opus":0.004355218744867199,"score_gpt":0.21825607063201102,"score_spread":0.21390085188714383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003493907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881227,0.0005245878,0.000050926294,0.0011344657,0.000085135696,0.00029441962,0.00003169776,0.000013763811,0.009742305],"genre_scores_gemma":[0.9975968,0.000017455832,0.00076555926,0.0011727636,0.000031401338,0.0000010285879,0.0000076499655,0.000032245796,0.00037510006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990207,0.000037874786,0.00022364038,0.00017910797,0.0003132852,0.00022537104],"domain_scores_gemma":[0.9993781,0.0000068623062,0.00012754029,0.00034949023,0.000053102493,0.00008490475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007272721,0.00012473781,0.00025247366,0.00006922003,0.000058278853,0.00000939771,0.00016140302,0.00010734846,0.00028705035],"category_scores_gemma":[0.000024924311,0.000095324365,0.00015566956,0.00028196306,0.000062032894,0.000021878963,0.00005663083,0.00013765307,0.000016924947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062871855,0.000055939017,0.0027203523,0.000058035337,0.000053946616,0.000008833759,0.00087597454,0.0003367541,0.9922403,0.00018720822,0.002595691,0.0008040993],"study_design_scores_gemma":[0.0026128422,0.00030035074,0.003898984,0.00012870792,0.00012443654,0.0000043971304,0.0009451536,0.00006171627,0.9485532,0.0003431895,0.04281771,0.00020930928],"about_ca_topic_score_codex":0.00008860563,"about_ca_topic_score_gemma":0.00003683248,"teacher_disagreement_score":0.04368709,"about_ca_system_score_codex":0.00007717684,"about_ca_system_score_gemma":0.00007989054,"threshold_uncertainty_score":0.3887215},"labels":[],"label_agreement":null},{"id":"W2004352744","doi":"10.1016/j.molcel.2007.11.027","title":"mRNA Decapping Is Promoted by an RNA-Binding Channel in Dcp2","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; Howard Hughes Medical Institute; Sandler Foundation; National Science Foundation","keywords":"Biology; RNA; Nucleotide; Cell biology; Messenger RNA; RNA-binding protein; Plasma protein binding; Binding site; Biophysics; Biochemistry; Gene","score_opus":0.013266279126469034,"score_gpt":0.24877291168282292,"score_spread":0.2355066325563539,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004352744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934854,0.0008682912,0.002621709,0.00011436274,0.000033391025,0.00022467966,0.000010029748,0.000014847907,0.0026272906],"genre_scores_gemma":[0.9961659,0.00019953378,0.00039496802,0.00037797986,0.000044532448,0.000021830694,0.00014131758,0.000039290873,0.0026146492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985329,0.00008535014,0.0001945192,0.00045970466,0.00022036719,0.0005071811],"domain_scores_gemma":[0.9993314,0.000003699556,0.000049335144,0.00038056614,0.000046618956,0.00018837041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018257105,0.00017597957,0.00014993297,0.00009515514,0.00011326322,0.00002558055,0.00026981792,0.00016142434,0.000022216096],"category_scores_gemma":[0.00003092799,0.00018640769,0.00007761715,0.00018474691,0.000053583008,0.000007549686,0.00010768174,0.00017298294,0.000027956474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028110924,0.00010016233,0.00061853416,0.000015595775,0.000012136263,0.00014815782,0.00013422339,0.00005010408,0.99697113,0.0000017008589,0.0014335619,0.00048656942],"study_design_scores_gemma":[0.00068139617,0.00022653685,0.00014628119,0.000014508413,0.000003181081,0.000019518724,0.0000667614,0.00134096,0.99340796,0.0000128893425,0.0038479993,0.00023199075],"about_ca_topic_score_codex":0.00011428421,"about_ca_topic_score_gemma":0.000014898475,"teacher_disagreement_score":0.0035631661,"about_ca_system_score_codex":0.000026031035,"about_ca_system_score_gemma":0.00007047352,"threshold_uncertainty_score":0.76014847},"labels":[],"label_agreement":null},{"id":"W2004737134","doi":"10.1016/j.molcel.2008.12.025","title":"Global Map of SUMO Function Revealed by Protein-Protein Interaction and Genetic Networks","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":122,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto","funders":"","keywords":"Biology; Function (biology); Computational biology; Endonuclease; Gene; Protein–protein interaction; Saccharomyces cerevisiae; Ubiquitin; Genetics","score_opus":0.004245593581996406,"score_gpt":0.20751430720542582,"score_spread":0.2032687136234294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004737134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95044893,0.0038854538,0.042886715,0.00012111447,0.0000639046,0.0005392036,0.000015570417,0.000015664069,0.0020234254],"genre_scores_gemma":[0.9977025,0.000030957828,0.0012914293,0.00024559945,0.000072268704,0.000028977996,0.00010277771,0.000014472873,0.00051100826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990173,0.000096855634,0.00021566346,0.00033705542,0.000117246265,0.00021586254],"domain_scores_gemma":[0.9994596,0.0000017050527,0.00012363728,0.00027120285,0.000058705184,0.0000851363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000084804466,0.0001699091,0.00014150715,0.000021377818,0.000042980944,0.000021610726,0.00010182725,0.00017785313,0.000021463198],"category_scores_gemma":[0.000011850404,0.0001779494,0.00007503485,0.0000725565,0.000038799513,0.000004148665,0.000047993868,0.00008422945,0.0000059478593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016687746,0.00006884628,0.00033531402,0.000038834118,0.0000160952,0.000007706874,0.0000046988303,0.00010987634,0.9912296,0.00005898405,0.00090635265,0.0070568416],"study_design_scores_gemma":[0.00066712906,0.001124667,0.0011472665,0.00004043408,0.000028006163,0.0000113845,0.000014841725,0.0002666274,0.9840168,0.00043114653,0.012012556,0.00023917931],"about_ca_topic_score_codex":0.000017590903,"about_ca_topic_score_gemma":0.0000037242341,"teacher_disagreement_score":0.04725356,"about_ca_system_score_codex":0.000014566323,"about_ca_system_score_gemma":0.000022351156,"threshold_uncertainty_score":0.72565657},"labels":[],"label_agreement":null},{"id":"W2004816473","doi":"10.1016/s1097-2765(03)00494-5","title":"Contrasting Functions of Calreticulin and Calnexin in Glycoprotein Folding and ER Quality Control","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":217,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institutes of Health Research; University of Alberta","funders":"","keywords":"Calnexin; Calreticulin; Biology; Glycoprotein; Folding (DSP implementation); Cell biology; Quality (philosophy); Protein folding; Endoplasmic reticulum; Computational biology; Genetics; Engineering","score_opus":0.005037463474081182,"score_gpt":0.22940724871623666,"score_spread":0.22436978524215548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004816473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98255163,0.0025753127,0.013781033,0.000113996466,0.000027024375,0.00021687784,0.000029130651,0.0000050622475,0.00069990027],"genre_scores_gemma":[0.99913806,0.000051467094,0.00055439124,0.0001536562,0.00001631595,0.000021007912,0.000018788312,0.000012464434,0.000033854354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991418,0.000066863686,0.00023768692,0.0002805258,0.00009052094,0.00018258813],"domain_scores_gemma":[0.99960977,0.000017772772,0.00007420106,0.00015868527,0.0000364527,0.00010313545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001472965,0.00012381942,0.00017478208,0.000035580484,0.000036089878,0.000013661568,0.000046399316,0.00009452553,0.0000050515687],"category_scores_gemma":[0.00013112203,0.0001214825,0.000049824215,0.000052768475,0.000107017695,0.0000039099273,0.000046963436,0.00007334745,7.685319e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001111046,0.00007841776,0.009653956,0.0000780272,0.000017624698,0.000028244554,0.000036767367,0.0006401975,0.9882988,0.00050026865,0.000006580834,0.00055005343],"study_design_scores_gemma":[0.008230669,0.00030472348,0.016275069,0.00009199536,0.00006714968,0.000014479144,0.0003063885,0.00027778198,0.97307426,0.00056175055,0.0004271108,0.00036864917],"about_ca_topic_score_codex":0.00025324526,"about_ca_topic_score_gemma":0.000045422083,"teacher_disagreement_score":0.016586393,"about_ca_system_score_codex":0.000009407296,"about_ca_system_score_gemma":0.000043009586,"threshold_uncertainty_score":0.49539125},"labels":[],"label_agreement":null},{"id":"W2005433767","doi":"10.1016/j.molcel.2014.09.005","title":"MicroRNAs Trigger Dissociation of eIF4AI and eIF4AII from Target mRNAs in Humans","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Deutsche Forschungsgemeinschaft; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Uehara Memorial Foundation; Wilhelm Sander-Stiftung; Naito Foundation","keywords":"Biology; microRNA; Computational biology; Cell biology; Genetics; Gene","score_opus":0.0031423364332733026,"score_gpt":0.18077025504532804,"score_spread":0.17762791861205474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005433767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98545104,0.0043982905,0.00090291275,0.000111658606,0.0001651291,0.000111095054,0.000028968214,0.00001235402,0.008818563],"genre_scores_gemma":[0.9950784,0.000049091326,0.0002112393,0.000095192605,0.000009431698,0.0000044725925,0.00020027757,0.000013640142,0.004338285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992056,0.00013381032,0.00023312772,0.00022047314,0.00002442351,0.00018254624],"domain_scores_gemma":[0.99962735,0.000041881434,0.00011415001,0.00017904639,0.00002482231,0.000012726117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014630462,0.000115779825,0.00024341303,0.00007405682,0.000041055886,0.000006821591,0.00009590082,0.00016938141,0.00054115074],"category_scores_gemma":[0.000020861062,0.00011356187,0.00005474063,0.00006203764,0.00007807059,0.000023585677,0.000044180142,0.00013851386,0.0000871169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026629463,0.000109839006,0.0060483506,0.000021416019,0.000023898958,0.0000025647369,0.00060975074,0.0000050554736,0.99149024,0.0003371848,0.000667866,0.00065717625],"study_design_scores_gemma":[0.002108475,0.00009891719,0.016681751,0.000021639107,0.000033581404,5.84738e-7,0.00008177822,0.00001293055,0.8349249,0.00064543716,0.14521547,0.0001745779],"about_ca_topic_score_codex":0.0004749038,"about_ca_topic_score_gemma":0.000063579515,"teacher_disagreement_score":0.1565654,"about_ca_system_score_codex":0.000016087624,"about_ca_system_score_gemma":0.00001207956,"threshold_uncertainty_score":0.5925221},"labels":[],"label_agreement":null},{"id":"W2005572311","doi":"10.1016/j.molcel.2008.05.014","title":"cIAP1 and cIAP2 Facilitate Cancer Cell Survival by Functioning as E3 Ligases that Promote RIP1 Ubiquitination","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1087,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Aegera Therapeutics (Canada); McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Ubiquitin; Biology; Inhibitor of apoptosis; Cell biology; Signal transducing adaptor protein; Ubiquitin ligase; Cancer research; Cancer cell; Apoptosis; Cancer; Signal transduction; Programmed cell death; Genetics; Gene","score_opus":0.0191157838218795,"score_gpt":0.22681564877820068,"score_spread":0.20769986495632117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005572311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96473604,0.008821338,0.0019890198,0.000105769854,0.00015818709,0.00034120984,0.0000992394,0.000038177706,0.023711009],"genre_scores_gemma":[0.98785967,0.0015941681,0.0002831378,0.00040695153,0.00009221853,0.00008323404,0.00025842548,0.000044732886,0.009377483],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852663,0.00012071418,0.00019264809,0.00054359116,0.00025014323,0.00036627508],"domain_scores_gemma":[0.9993488,0.000011141981,0.00011116892,0.0002834738,0.00009476862,0.00015059885],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017610897,0.00026223462,0.00018604677,0.000032620577,0.00023789873,0.00004090343,0.00014071322,0.00018970585,0.00011690829],"category_scores_gemma":[0.0000313537,0.00027668272,0.00009941803,0.00007467804,0.00010313154,0.0000125756305,0.0001218374,0.0001301438,0.000027472748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000469215,0.000073268486,0.0014890343,0.000061021015,0.000023378549,0.000028060582,0.00021426321,0.00001758937,0.9945178,0.000011035331,0.0016351374,0.0018824792],"study_design_scores_gemma":[0.0006310096,0.00028617718,0.00025544627,0.000013803783,0.000022888162,0.00001782215,0.00010870095,0.000045486584,0.9200632,0.00004682575,0.07819585,0.00031277473],"about_ca_topic_score_codex":0.0003388807,"about_ca_topic_score_gemma":0.000040430412,"teacher_disagreement_score":0.076560706,"about_ca_system_score_codex":0.000028343868,"about_ca_system_score_gemma":0.00009326544,"threshold_uncertainty_score":0.9999685},"labels":[],"label_agreement":null},{"id":"W2006463715","doi":"10.1016/j.molcel.2007.06.022","title":"Activator-Mediated Recruitment of the MLL2 Methyltransferase Complex to the β-Globin Locus","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":144,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Ligue Contre le Cancer; Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Biology; Methyltransferase; Locus (genetics); Genetics; Activator (genetics); Globin; Cell biology; Gene; Methylation","score_opus":0.026518056667442818,"score_gpt":0.2800592310553051,"score_spread":0.2535411743878623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006463715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9497646,0.001008237,0.044225894,0.00059251534,0.00015609009,0.00072674506,0.000026463786,0.00000653037,0.0034928985],"genre_scores_gemma":[0.99814075,0.000053946187,0.0007274097,0.0007244273,0.00005771843,0.000022017603,0.000053688862,0.00002393132,0.00019613742],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988504,0.00013767986,0.0002553085,0.0002594967,0.00024464063,0.00025249086],"domain_scores_gemma":[0.99909925,0.000029977557,0.00007709838,0.0006096093,0.000091144626,0.00009290597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005161918,0.00014988446,0.0001211118,0.00003190324,0.00008358476,0.000012859648,0.00034339642,0.00010909217,0.000018507431],"category_scores_gemma":[0.000069384165,0.00009711585,0.0001416359,0.00022941685,0.00006118736,0.0000012235075,0.00011122172,0.000096320946,0.000012190673],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046151585,0.000062484825,0.00037977067,0.000008566734,0.000026706071,0.0000025741085,0.000076833305,0.00039162804,0.99591327,0.000060082875,0.00023505875,0.0027968944],"study_design_scores_gemma":[0.00028337608,0.00013495261,0.0025195922,0.000004667778,0.000019192714,5.2481806e-7,0.000040532235,0.000014128079,0.86688584,0.000043051168,0.12994468,0.00010943789],"about_ca_topic_score_codex":0.00004359989,"about_ca_topic_score_gemma":0.000056675533,"teacher_disagreement_score":0.12970963,"about_ca_system_score_codex":0.000019396199,"about_ca_system_score_gemma":0.00004962298,"threshold_uncertainty_score":0.39602697},"labels":[],"label_agreement":null},{"id":"W2006920169","doi":"10.1016/j.molcel.2012.03.026","title":"Molecular Model of the Human 26S Proteasome","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":217,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Cancer Research UK","keywords":"Biology; Proteasome; Computational biology; Cell biology","score_opus":0.014565331955089985,"score_gpt":0.2324761102113889,"score_spread":0.2179107782562989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006920169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9692168,0.001379221,0.0058742925,0.00007125274,0.00008349882,0.0005159861,0.000021643908,0.000014232195,0.02282306],"genre_scores_gemma":[0.99726635,0.000008286491,0.0011612836,0.00047555074,0.00007284259,0.00006875384,0.00002947468,0.000048915615,0.0008685686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986975,0.00012598127,0.00023423793,0.00026437215,0.00025938477,0.00041850834],"domain_scores_gemma":[0.9988772,0.000002715856,0.00013580352,0.00078665384,0.00006982673,0.00012775803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024097036,0.0002095977,0.00015992345,0.00003205824,0.00009195053,0.000012250755,0.0004414246,0.00018133152,0.000023369179],"category_scores_gemma":[0.000032752007,0.00016921654,0.00024870023,0.0001089964,0.000112324386,0.0000047301164,0.0002913972,0.00014921845,0.000015845504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000085365355,0.00012854315,0.0010919834,0.000047989677,0.000022752669,0.0000012895238,0.00006724365,0.0006643532,0.99606353,0.0015679378,0.00019412734,0.0001417241],"study_design_scores_gemma":[0.00034079695,0.00006920068,0.00014088683,0.000012643327,0.000029298788,0.000004111738,0.000015259506,0.00019178004,0.9946591,0.00040443486,0.003916678,0.00021580461],"about_ca_topic_score_codex":0.0000086203845,"about_ca_topic_score_gemma":8.461178e-7,"teacher_disagreement_score":0.02804951,"about_ca_system_score_codex":0.000011797205,"about_ca_system_score_gemma":0.00006143599,"threshold_uncertainty_score":0.69004506},"labels":[],"label_agreement":null},{"id":"W2007706803","doi":"10.1016/j.molcel.2014.10.014","title":"A Negative Feedback Loop of Transcription Factors Specifies Alternative Dendritic Cell Chromatin States","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Human Genome Research Institute; Azrieli Foundation","keywords":"Biology; Chromatin; Transcription factor; Transcription (linguistics); Cell biology; Computational biology; Genetics; DNA; Gene","score_opus":0.008388203544641254,"score_gpt":0.20849661346186565,"score_spread":0.2001084099172244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007706803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98565227,0.0046295994,0.005562189,0.000043963777,0.00038062537,0.00024334695,0.00003552595,0.000040083803,0.0034124232],"genre_scores_gemma":[0.99572,0.00024361732,0.0001852001,0.00009094439,0.000008896016,0.000010792477,0.00009604428,0.000032435906,0.003612059],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984029,0.0005811541,0.0003607723,0.00026488028,0.00006195649,0.00032831667],"domain_scores_gemma":[0.9991697,0.00024156792,0.00018904753,0.000292878,0.00008905197,0.00001775076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015971568,0.00025288243,0.00036596018,0.00013458921,0.000102976366,0.000017283844,0.0002518925,0.0001626573,0.0006303107],"category_scores_gemma":[0.00003843991,0.00022528274,0.0001894495,0.0001258804,0.0002884266,0.00009142559,0.000030393478,0.00022238503,0.00021873563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028087717,0.00020387648,0.00009785096,0.000066724606,0.00010547014,0.0000035726082,0.0036646181,0.000059339618,0.9944586,0.00015851781,0.00016736638,0.0007331414],"study_design_scores_gemma":[0.0018612887,0.00054555637,0.0010871262,0.000048479873,0.000045300007,0.0000041109624,0.0012855133,0.000024028272,0.9892052,0.00042943994,0.0052323644,0.00023162886],"about_ca_topic_score_codex":0.00022790737,"about_ca_topic_score_gemma":0.0000056422746,"teacher_disagreement_score":0.010067767,"about_ca_system_score_codex":0.000031130192,"about_ca_system_score_gemma":0.00003137512,"threshold_uncertainty_score":0.9186763},"labels":[],"label_agreement":null},{"id":"W2007982521","doi":"10.1016/j.molcel.2005.10.036","title":"Rapid tRNA Decay Can Result from Lack of Nonessential Modifications","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":496,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences","keywords":"Biology; Transfer RNA; Computational biology; Evolutionary biology; RNA; Genetics; Gene","score_opus":0.015021751645417978,"score_gpt":0.24587674865160156,"score_spread":0.2308549970061836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007982521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9547813,0.0024374984,0.022239452,0.00032059022,0.00010696429,0.00016798245,0.00021677671,0.000012128215,0.019717291],"genre_scores_gemma":[0.9961357,0.0001357477,0.0013365811,0.00010961574,0.00013444609,0.000031803225,0.00077304227,0.00002483139,0.0013182323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990638,0.000048482772,0.00025944525,0.00032487433,0.00013696501,0.00016645729],"domain_scores_gemma":[0.9991094,0.0000053151484,0.0001219045,0.0006002731,0.00011466911,0.000048471895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005843583,0.00012534556,0.00012191396,0.000038647857,0.000056233934,0.000017484012,0.00021482655,0.00011701881,0.00005310564],"category_scores_gemma":[0.0000065603867,0.00013088087,0.00011530912,0.00011221456,0.000077547826,0.0000020275506,0.000043467928,0.000055363325,0.000013522051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023611585,0.00012344989,0.00013380748,0.000006544545,0.000019771564,0.0000024965707,0.000015121451,0.0006689198,0.99471945,0.0004560056,0.003008264,0.000822547],"study_design_scores_gemma":[0.0004932466,0.000038528346,0.0014932904,0.000004096676,0.0000329762,7.086235e-7,0.000022542106,0.00010624842,0.9472461,0.00018329846,0.050230872,0.00014812317],"about_ca_topic_score_codex":0.00076154596,"about_ca_topic_score_gemma":0.00010155679,"teacher_disagreement_score":0.047473393,"about_ca_system_score_codex":0.000011532559,"about_ca_system_score_gemma":0.00008285505,"threshold_uncertainty_score":0.5337167},"labels":[],"label_agreement":null},{"id":"W2008589209","doi":"10.1016/j.molcel.2009.04.023","title":"Quantitative Proteomics Reveals a Dynamic Interactome and Phase-Specific Phosphorylation in the Neurospora Circadian Clock","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":203,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Cancer Institute; Fonds de Recherche du Québec - Santé","keywords":"Biology; Circadian rhythm; Circadian clock; Interactome; Proteomics; Phosphorylation; Cell biology; Neurospora; Quantitative proteomics; Computational biology; Biochemistry; Neurospora crassa; Neuroscience; Mutant","score_opus":0.020245194583109128,"score_gpt":0.2776861843417278,"score_spread":0.2574409897586187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008589209","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937159,0.00097318523,0.0016741138,0.00076996465,0.00009333283,0.00077040965,0.000014013439,0.000028038607,0.001961072],"genre_scores_gemma":[0.9973408,0.00016672279,0.0003676881,0.0019673232,0.00001155233,0.00002010442,0.000008049847,0.000019012377,0.00009876688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859184,0.00020428003,0.0002532983,0.00044960735,0.00020213575,0.00029886802],"domain_scores_gemma":[0.9993858,0.000100182704,0.00010933776,0.00030749175,0.000017162072,0.00008006818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021612544,0.0001729629,0.00016431285,0.00014209519,0.000088542336,0.00011378798,0.00020296694,0.00007170761,0.000013035545],"category_scores_gemma":[0.000086627726,0.00015166432,0.000057768102,0.000429104,0.00007363982,0.00014902628,0.000018604227,0.00031823802,0.00004607484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061380924,0.00018459535,0.00011079176,0.000007988068,6.0529203e-7,0.00036394718,0.0019469688,0.00003783262,0.98262596,0.01308562,0.00004345451,0.0015308774],"study_design_scores_gemma":[0.0028333666,0.0012214268,0.019444963,0.000070958355,0.000015629135,0.0001512294,0.00042819395,0.007785764,0.95596904,0.0045072148,0.00700087,0.0005713652],"about_ca_topic_score_codex":0.000005732817,"about_ca_topic_score_gemma":0.0000030682017,"teacher_disagreement_score":0.02665692,"about_ca_system_score_codex":0.000045782424,"about_ca_system_score_gemma":0.000023741224,"threshold_uncertainty_score":0.6184692},"labels":[],"label_agreement":null},{"id":"W2009302210","doi":"10.1016/j.molcel.2014.08.011","title":"A Global Regulatory Mechanism for Activating an Exon Network Required for Neurogenesis","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":146,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Biology; Neurogenesis; Mechanism (biology); Exon; Cell biology; Computational biology; Genetics; Neuroscience; Gene","score_opus":0.01264742074184669,"score_gpt":0.26193451652529165,"score_spread":0.24928709578344496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009302210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67912215,0.00015401021,0.31968,0.00006071944,0.00008505943,0.00045278587,0.000013746251,0.000018848414,0.00041268743],"genre_scores_gemma":[0.97904986,0.000008354233,0.01900986,0.0007532023,0.00038300644,0.00016918422,0.00014458464,0.000051912528,0.0004300569],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985394,0.00009985649,0.00018243263,0.0004978518,0.00014895397,0.00053149357],"domain_scores_gemma":[0.9990877,0.000021731648,0.000083261795,0.00049328274,0.00013939422,0.00017463353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037550874,0.00017609006,0.00016042919,0.000019631441,0.00017747097,0.00004176357,0.00025041745,0.00015840835,0.0000018925934],"category_scores_gemma":[0.0001664521,0.00018483796,0.00017480973,0.000082420054,0.000027225762,0.0000055694404,0.00008352366,0.00003741142,0.0000013884091],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017032809,0.000035099532,0.00008632452,0.000045039546,0.00002963912,0.000001648886,0.00000397006,0.00065293396,0.98999655,0.0030368848,0.00065263966,0.005288929],"study_design_scores_gemma":[0.0010903653,0.0010300451,0.00011245888,0.000010272245,0.000031699674,0.000003989865,0.000016604916,0.011142524,0.9725874,0.003132907,0.010575445,0.00026628326],"about_ca_topic_score_codex":0.000013037308,"about_ca_topic_score_gemma":0.000017741813,"teacher_disagreement_score":0.30067015,"about_ca_system_score_codex":0.000016395461,"about_ca_system_score_gemma":0.000059655053,"threshold_uncertainty_score":0.75374734},"labels":[],"label_agreement":null},{"id":"W2009396278","doi":"10.1016/s1097-2765(00)00134-9","title":"Smad7 Binds to Smurf2 to Form an E3 Ubiquitin Ligase that Targets the TGFβ Receptor for Degradation","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1332,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Ubiquitin ligase; Ubiquitin; Biology; Receptor; Ubiquitin-Protein Ligases; Signal transducing adaptor protein; Cell biology; Proteolysis; Transforming growth factor; Signal transduction; Molecular biology; Biochemistry; Gene; Enzyme","score_opus":0.011272965105223307,"score_gpt":0.2482977596931472,"score_spread":0.23702479458792391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009396278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9839659,0.00054020516,0.012876861,0.00054212695,0.00010889466,0.000880306,0.00009983832,0.00003805197,0.0009478549],"genre_scores_gemma":[0.98290855,0.000017596656,0.009008145,0.0037621066,0.00021299574,0.00029680293,0.0008110033,0.00007543612,0.0029073502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985685,0.00006965824,0.00021171551,0.00052863196,0.00020382881,0.0004177083],"domain_scores_gemma":[0.9988815,0.000015932746,0.000054021493,0.00067092536,0.00009090905,0.00028670536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002099955,0.00023830074,0.00014154828,0.00005196837,0.00017242362,0.00007890781,0.0004509455,0.0001368088,0.00018232573],"category_scores_gemma":[0.000067452645,0.00020500443,0.00014604321,0.00012601426,0.000030797113,0.0000073615884,0.000078379046,0.00006577133,0.0001344489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024053032,0.00014282353,0.00011086104,0.000021649592,0.000024342937,0.00000408113,0.00017781467,0.00067651505,0.97000295,0.00001613452,0.010799997,0.017782288],"study_design_scores_gemma":[0.0002901775,0.00037803722,0.000119377386,0.00000958136,0.000022472275,0.0000012040605,0.000041509753,0.000035980498,0.7056301,0.000031862935,0.293223,0.00021665006],"about_ca_topic_score_codex":0.000025226562,"about_ca_topic_score_gemma":0.000033602057,"teacher_disagreement_score":0.28242302,"about_ca_system_score_codex":0.000026399985,"about_ca_system_score_gemma":0.00008169555,"threshold_uncertainty_score":0.8359838},"labels":[],"label_agreement":null},{"id":"W2009779043","doi":"10.1016/j.molcel.2011.06.019","title":"ATR Autophosphorylation as a Molecular Switch for Checkpoint Activation","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":268,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of General Medical Sciences","keywords":"Autophosphorylation; CHEK1; DNA damage; G2-M DNA damage checkpoint; Biology; Cell biology; Phosphorylation; DNA; Cancer research; Cell cycle checkpoint; Biochemistry; Cell cycle; Protein kinase A; Gene","score_opus":0.010780447043902385,"score_gpt":0.2224565821860582,"score_spread":0.21167613514215583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009779043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76991385,0.00019343903,0.21683995,0.000057168192,0.00013319853,0.00063036685,0.000005489475,0.00005163765,0.012174901],"genre_scores_gemma":[0.97632277,0.000010127224,0.021239325,0.000590247,0.0000509177,0.00016879158,0.00018102916,0.00007842006,0.001358364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862707,0.00004896674,0.0002521047,0.000546001,0.00019193882,0.0003339109],"domain_scores_gemma":[0.99903864,0.000005306766,0.00013734092,0.0005647533,0.00014166797,0.00011228775],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020206557,0.00024011462,0.00015482235,0.000059801027,0.00006758511,0.000022624265,0.0002303472,0.0002549866,0.00007249185],"category_scores_gemma":[0.000081500475,0.00026506843,0.00023918934,0.000106393934,0.000030139243,0.0000071623463,0.00010085154,0.00008448778,0.000057266046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012885738,0.000106988984,0.00003650657,0.00002927612,0.00004034779,0.000012743539,0.00009598815,0.00004330219,0.9966634,0.0012239745,0.00020762187,0.0014110215],"study_design_scores_gemma":[0.0007395678,0.0005327078,0.000089685476,0.000009590927,0.00003831783,0.000006347606,0.00004385049,0.00030180727,0.98505807,0.0030458206,0.009819375,0.0003148584],"about_ca_topic_score_codex":0.000044658475,"about_ca_topic_score_gemma":0.0000025930244,"teacher_disagreement_score":0.20640893,"about_ca_system_score_codex":0.000032735625,"about_ca_system_score_gemma":0.00009288558,"threshold_uncertainty_score":0.99998015},"labels":[],"label_agreement":null},{"id":"W2010479872","doi":"10.1016/j.molcel.2008.06.009","title":"Dun1 Counts on Rad53 to Be Turned On","year":2008,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Biology; Computational biology","score_opus":0.010747690494671945,"score_gpt":0.21815526164188048,"score_spread":0.20740757114720854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010479872","genre_codex":"other","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07986981,0.0013306794,0.0023451992,0.2764536,0.0043900465,0.002452477,0.000476574,0.0002630893,0.6324185],"genre_scores_gemma":[0.011391527,0.000073747055,0.0006806534,0.9246073,0.0012485648,0.000056038392,0.0011674335,0.00018469771,0.060590055],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99828607,0.000077033474,0.00017036835,0.00069408497,0.0003912836,0.00038115014],"domain_scores_gemma":[0.9988497,0.0000067429633,0.00007497867,0.0009300857,0.000048498667,0.000089986235],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00005603525,0.00036917638,0.00023532323,0.00009537836,0.000042441425,0.000022342296,0.00037712438,0.00081944064,0.00013617851],"category_scores_gemma":[0.000028863378,0.00037527224,0.00022377956,0.00007014665,0.000027544065,6.382552e-7,0.000104184524,0.000512626,0.0012579635],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019521483,0.000029388011,3.3100014e-7,0.00001877799,0.000028210457,0.00066112657,0.0000075175194,0.000015813506,0.2025011,0.000010979279,0.79652095,0.00018630896],"study_design_scores_gemma":[0.00014659396,0.00032346163,7.4280996e-7,0.000012258684,0.00001215658,0.000009622013,7.315426e-7,0.0000019295517,0.40445772,0.000013515702,0.594776,0.00024531232],"about_ca_topic_score_codex":0.000003700786,"about_ca_topic_score_gemma":5.567121e-7,"teacher_disagreement_score":0.64815366,"about_ca_system_score_codex":0.000039280072,"about_ca_system_score_gemma":0.00007119551,"threshold_uncertainty_score":0.99986994},"labels":[],"label_agreement":null},{"id":"W2010762697","doi":"10.1016/j.molcel.2009.04.007","title":"Protein Phosphorylation Goes Negative","year":2009,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Phosphorylation; Biology; Scopus; Molecular biology; Computational biology; Cell biology; Biochemistry; MEDLINE","score_opus":0.006210417096677085,"score_gpt":0.2262685414776586,"score_spread":0.22005812438098152,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010762697","genre_codex":"other","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004484701,0.001211612,0.17855705,0.36317328,0.00005237315,0.0024298893,0.00027778698,0.0013043943,0.44850892],"genre_scores_gemma":[0.018930422,0.00013129656,0.3165778,0.542058,0.002250575,0.0028008807,0.0035253263,0.00048796093,0.11323775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987061,0.000015069751,0.000249341,0.0004987782,0.00023396987,0.00029675863],"domain_scores_gemma":[0.9989592,0.000016669728,0.0002526378,0.0006626052,0.00007063053,0.00003828369],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00003143503,0.000325328,0.0002366115,0.000043955686,0.00008044444,0.000046202254,0.00033683417,0.0007674777,0.00033993874],"category_scores_gemma":[0.000012541975,0.00034841834,0.00016121603,0.00009923158,0.000045377175,0.000037442816,0.000054582702,0.001360208,0.000093372204],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000067500227,0.000040804294,9.66984e-7,0.00019765556,0.000018195948,0.0001871484,0.00002725558,0.000021683809,0.69366574,0.00024820011,0.30181673,0.0037688613],"study_design_scores_gemma":[0.00007040762,0.0000086095,8.6655646e-8,0.000040599425,0.000015002267,0.0000011181429,0.000001723196,0.000026459365,0.53220034,0.011723614,0.45569354,0.0002185091],"about_ca_topic_score_codex":0.000019835123,"about_ca_topic_score_gemma":3.3025503e-7,"teacher_disagreement_score":0.33527115,"about_ca_system_score_codex":0.0001143635,"about_ca_system_score_gemma":0.00004505273,"threshold_uncertainty_score":0.99989676},"labels":[],"label_agreement":null},{"id":"W2011180717","doi":"10.1016/j.molcel.2005.12.007","title":"ING Tumor Suppressor Proteins Are Critical Regulators of Chromatin Acetylation Required for Genome Expression and Perpetuation","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":654,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research","keywords":"Biology; Chromatin; Acetylation; Epigenetics; Histone; Cell biology; Cell cycle; Chromatin remodeling; Helicase; DNA; Genetics; Cancer research; Cancer; Gene; RNA","score_opus":0.007361827146455905,"score_gpt":0.23776270620113185,"score_spread":0.23040087905467593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011180717","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9088863,0.0015643282,0.088702634,0.00006373598,0.00003417979,0.0004545107,0.00002565019,0.000008637885,0.0002599983],"genre_scores_gemma":[0.9842382,0.000011509764,0.015255967,0.00001742011,0.00008810416,0.00006120841,0.00023014797,0.00002797397,0.00006945682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906164,0.000064874934,0.00027138073,0.00029651256,0.00014112706,0.00016448765],"domain_scores_gemma":[0.9994177,0.000018729614,0.00015862254,0.00022440209,0.00013689544,0.000043601707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018224206,0.00012674938,0.00013876257,0.00004952575,0.00007553492,0.000022495935,0.000067095745,0.000120272154,0.000005028276],"category_scores_gemma":[0.00013415632,0.00013111546,0.00006612108,0.00005278111,0.00006000877,0.0000072683774,0.000052572235,0.00003605819,5.613762e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039898034,0.000052094063,0.00039392323,0.00013230096,0.0000039532324,0.0000010320433,0.000030049014,0.00046793223,0.99863327,0.0001138171,0.000018624087,0.00011308378],"study_design_scores_gemma":[0.000529065,0.00018361142,0.0046287896,0.00003074009,0.0000203318,8.058366e-7,0.000030368092,0.0008727482,0.99184847,0.0009048404,0.00080217427,0.00014807524],"about_ca_topic_score_codex":0.0000105739955,"about_ca_topic_score_gemma":0.0000039225934,"teacher_disagreement_score":0.07535189,"about_ca_system_score_codex":0.00001109377,"about_ca_system_score_gemma":0.000024631941,"threshold_uncertainty_score":0.53467333},"labels":[],"label_agreement":null},{"id":"W2011463708","doi":"10.1016/j.molcel.2009.09.034","title":"EGF-Induced ERK Activation Promotes CK2-Mediated Disassociation of α-Catenin from β-Catenin and Transactivation of β-Catenin","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":272,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Cancer Institute","keywords":"Transactivation; Catenin; Wnt signaling pathway; Phosphorylation; Biology; Beta-catenin; Cancer research; Cell biology; MAPK/ERK pathway; Signal transduction; Crosstalk; Transcription factor; Biochemistry","score_opus":0.006408880378157324,"score_gpt":0.20894751933319552,"score_spread":0.2025386389550382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011463708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992519,0.0003455294,0.0059785587,0.00024789546,0.000061956,0.00031919245,0.000029200635,0.000019950905,0.00047870522],"genre_scores_gemma":[0.9968983,0.000072443545,0.0017628408,0.00010245894,0.000050300307,0.00002001585,0.00091764977,0.000029896757,0.0001461238],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848056,0.000111830115,0.0004555635,0.00042395727,0.00029280293,0.00023526546],"domain_scores_gemma":[0.99910396,0.000029074768,0.00039718734,0.00019598845,0.00020625677,0.00006753264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002314924,0.00024148454,0.00029344243,0.00009515501,0.00005153233,0.000018450071,0.00017069447,0.00029716024,0.00002029144],"category_scores_gemma":[0.00007816554,0.00024510061,0.00010452809,0.0002310262,0.000054712003,0.000018926447,0.00002576213,0.00011460486,0.0000026862267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017047231,0.00014640988,0.0013943891,0.000027015883,0.00007626062,0.0000011446281,0.00036414666,0.000047369696,0.99405634,0.000019787994,0.000116330695,0.0035803544],"study_design_scores_gemma":[0.0010832836,0.00032180958,0.012737919,0.00004631153,0.00005567121,4.948893e-7,0.00007099509,0.00013043504,0.9847422,0.00040108533,0.00014622985,0.00026352916],"about_ca_topic_score_codex":0.00008577862,"about_ca_topic_score_gemma":0.00000476274,"teacher_disagreement_score":0.011343529,"about_ca_system_score_codex":0.00003301803,"about_ca_system_score_gemma":0.00008911252,"threshold_uncertainty_score":0.9994913},"labels":[],"label_agreement":null},{"id":"W2011818472","doi":"10.1016/s1097-2765(02)00776-1","title":"Akt Phosphorylates the Yes-Associated Protein, YAP, to Induce Interaction with 14-3-3 and Attenuation of p73-Mediated Apoptosis","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":839,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Cancer Research UK","keywords":"Protein kinase B; Phosphorylation; Biology; Coactivator; Cell biology; Apoptosis; Cancer research; Transcription factor; Molecular biology; Gene; Biochemistry","score_opus":0.006342885356718369,"score_gpt":0.20481803768878176,"score_spread":0.1984751523320634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011818472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961529,0.000296507,0.0019743326,0.0001257891,0.000042914187,0.00039154832,0.000010565275,0.000012172338,0.0009932781],"genre_scores_gemma":[0.99892706,0.00001390482,0.0004145813,0.00021895386,0.000012212166,0.000049702838,0.00008084741,0.000026544245,0.00025621787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990506,0.00015343516,0.0001753464,0.00027889028,0.00015719153,0.0001845055],"domain_scores_gemma":[0.99938244,0.00001604039,0.00012495011,0.00025305597,0.00015445602,0.00006905913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025866527,0.00015193566,0.0001312638,0.00004092175,0.00007184717,0.000023234446,0.00009713497,0.00013030261,0.000010435781],"category_scores_gemma":[0.00015728068,0.00011479305,0.00004638459,0.00018402941,0.000046421683,0.000004011107,0.000031029707,0.00011370805,0.000009194976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058376594,0.000068179004,0.0004727124,0.000013091781,0.000047298916,0.0000015832544,0.00018608477,0.00015875718,0.9986125,0.000014579206,0.000065250584,0.00030154915],"study_design_scores_gemma":[0.0004487538,0.0004526063,0.00014038931,0.000037061996,0.0000315378,0.0000021935832,0.00016215179,0.000029263267,0.9950465,0.000019676436,0.0034752744,0.00015458619],"about_ca_topic_score_codex":0.000049456863,"about_ca_topic_score_gemma":0.000017097786,"teacher_disagreement_score":0.003566032,"about_ca_system_score_codex":0.000014942876,"about_ca_system_score_gemma":0.00005374144,"threshold_uncertainty_score":0.46811247},"labels":[],"label_agreement":null},{"id":"W2012116244","doi":"10.1016/j.molcel.2014.03.008","title":"In the End, What’s the Problem?","year":2014,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Biology; Computational biology","score_opus":0.006470402412163755,"score_gpt":0.20576879892517685,"score_spread":0.1992983965130131,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012116244","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005241912,0.0058575664,0.0024885295,0.9476865,0.00095232646,0.001912729,0.000016653834,0.00003377344,0.03581001],"genre_scores_gemma":[0.018264532,0.00022345025,0.0005064372,0.9721589,0.0015230272,0.00025949496,0.00046043593,0.00011172467,0.006491972],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976087,0.0005871309,0.00027206328,0.0006176423,0.00041745274,0.0004970134],"domain_scores_gemma":[0.99827397,0.000032982316,0.00014980877,0.0014715269,0.00004474873,0.000026960326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058309885,0.00037716274,0.0002243977,0.000050337545,0.00007109941,0.00018881178,0.0012970403,0.0007990723,0.000051809417],"category_scores_gemma":[0.000017497805,0.00023182479,0.0002739822,0.00010989405,0.00011294651,0.000004242826,0.00021557622,0.0010406319,0.00013477137],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000552322,0.00002553343,0.0000015636455,0.00006538514,0.000028160814,0.00037407983,0.00007511392,0.000016008518,0.15027407,0.00007095005,0.8486552,0.00040836117],"study_design_scores_gemma":[0.00019335838,0.00010994055,7.2056946e-7,0.000021883228,0.000035062065,0.000046173667,0.000038845752,0.000007790849,0.16228585,0.0007769075,0.83622456,0.0002589301],"about_ca_topic_score_codex":0.000027853324,"about_ca_topic_score_gemma":0.000011893544,"teacher_disagreement_score":0.029318038,"about_ca_system_score_codex":0.000017719232,"about_ca_system_score_gemma":0.00007486119,"threshold_uncertainty_score":0.94535404},"labels":[],"label_agreement":null},{"id":"W2012248317","doi":"10.1016/j.molcel.2004.05.011","title":"A Unified Nomenclature for Protein Subunits of Mediator Complexes Linking Transcriptional Regulators to RNA Polymerase II","year":2004,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":279,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences","keywords":"Biology; Scopus; RNA polymerase II; Mediator; Transcription (linguistics); Genetics; RNA polymerase; Gene; Molecular biology; Cell biology; Gene expression; Promoter; RNA; MEDLINE; Biochemistry; Philosophy","score_opus":0.012437295247900824,"score_gpt":0.2402053237750254,"score_spread":0.22776802852712458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012248317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89049935,0.0059098504,0.012774256,0.082492225,0.0005389947,0.0043769595,0.0017626039,0.000040580966,0.001605166],"genre_scores_gemma":[0.86017746,0.00006402388,0.014389277,0.098813444,0.0031798193,0.00067292777,0.010870915,0.00037618566,0.011455965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997544,0.0000965118,0.00041799643,0.00072737684,0.0005987756,0.000615321],"domain_scores_gemma":[0.99872154,0.000010946654,0.00015375625,0.0006098964,0.0003196406,0.00018423406],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016384952,0.00043950134,0.00041442612,0.00022718984,0.0001352781,0.000031629,0.00060588605,0.0010222064,0.000044999113],"category_scores_gemma":[0.00003541577,0.00044453287,0.00036811962,0.00022786707,0.000117876545,0.0000024640858,0.00019955232,0.00063779205,0.000008363421],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016789263,0.00008350287,0.000003081106,0.0006426353,0.000105412415,0.00004516363,0.000067446694,0.0000925483,0.9807849,0.00015205094,0.017664397,0.00019096417],"study_design_scores_gemma":[0.00072188507,0.0006502521,0.000005178885,0.00011143215,0.00003795067,0.0000033919775,0.000005619143,0.0000063657203,0.73900765,0.0004434851,0.25864592,0.00036084146],"about_ca_topic_score_codex":0.000020254613,"about_ca_topic_score_gemma":0.000006988538,"teacher_disagreement_score":0.24177724,"about_ca_system_score_codex":0.000044006378,"about_ca_system_score_gemma":0.0005124853,"threshold_uncertainty_score":0.9998006},"labels":[],"label_agreement":null},{"id":"W2014963011","doi":"10.1016/j.molcel.2011.05.014","title":"SHP2 Tyrosine Phosphatase Converts Parafibromin/Cdc73 from a Tumor Suppressor to an Oncogenic Driver","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; Ministry of Education, Culture, Sports, Science and Technology; Japan Society for the Promotion of Science; Canadian Institutes of Health Research; Ontario Ministry of Health and Long-Term Care; Princess Margaret Hospital Foundation","keywords":"Biology; Wnt signaling pathway; Cyclin D1; Suppressor; Cancer research; Cell biology; Signal transduction; Cell cycle; Cell; Biochemistry; Gene","score_opus":0.012280804407462011,"score_gpt":0.22338977781231467,"score_spread":0.21110897340485266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014963011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98246527,0.009324042,0.0049388357,0.000055760884,0.00027669652,0.00082654617,0.0011013971,0.00007030365,0.0009411442],"genre_scores_gemma":[0.9825951,0.000031059666,0.012582262,0.0022304787,0.00012728857,0.00013527437,0.0019688015,0.00010819641,0.00022153478],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976273,0.00012516425,0.00036012736,0.0010099435,0.00027483047,0.0006026039],"domain_scores_gemma":[0.99783003,0.00001009005,0.00013304377,0.0014001038,0.00010982438,0.00051693333],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012260699,0.00043892165,0.00032657472,0.00006361259,0.00009022154,0.000053153453,0.00071330875,0.00017953479,0.00077449327],"category_scores_gemma":[0.00006644816,0.0004602587,0.00018311717,0.0001527078,0.00011427553,0.000018548024,0.00043109118,0.00013327706,0.00038342946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048582235,0.00034653957,0.00047386027,0.000017904362,0.00006617933,0.00035989773,0.00012696479,0.000016326978,0.992131,0.0002223314,0.0052541927,0.00049898657],"study_design_scores_gemma":[0.0012544002,0.0007711469,0.0012839525,0.0000174426,0.000084700056,0.000012607312,0.000028000808,0.000036753136,0.97459656,0.00018554708,0.021128293,0.00060060184],"about_ca_topic_score_codex":0.0006898454,"about_ca_topic_score_gemma":0.000042586882,"teacher_disagreement_score":0.017534439,"about_ca_system_score_codex":0.00002788369,"about_ca_system_score_gemma":0.000112599075,"threshold_uncertainty_score":0.9997849},"labels":[],"label_agreement":null},{"id":"W2015312982","doi":"10.1016/j.molcel.2008.02.006","title":"Transcription Factor Substitution during the Evolution of Fungal Ribosome Regulation","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Merck Canada Inc. (Canada); Biotechnology Research Institute","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Institute for Health and Care Research; Broad Institute","keywords":"Biology; Substitution (logic); Transcription factor; Ribosome; Transcription (linguistics); Genetics; Cell biology; Computational biology; Evolutionary biology; RNA; Gene","score_opus":0.00851383376160281,"score_gpt":0.19078816901282247,"score_spread":0.18227433525121967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015312982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94318146,0.0010070808,0.054795902,0.00002964802,0.000099225515,0.00021346679,0.000009724172,0.000011094288,0.0006524138],"genre_scores_gemma":[0.9989453,0.00006588157,0.00033720044,0.000015439386,0.000066296925,0.000016715965,0.000025538326,0.000014519688,0.0005131412],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992116,0.00009583182,0.00017320865,0.00020134043,0.00017482652,0.00014315614],"domain_scores_gemma":[0.9995303,0.0000033290055,0.0000887405,0.0002866984,0.000059134847,0.000031795345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008568815,0.000108714084,0.00008763871,0.00003683136,0.00013569418,0.0000057999505,0.000120176475,0.0001230489,0.000027750215],"category_scores_gemma":[0.000016031938,0.00009046357,0.000115066265,0.00008475718,0.000068608,0.0000060935677,0.000018758716,0.00005023799,0.000009141009],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062411855,0.000029925333,0.0006382085,0.00002240494,0.00001156313,0.0000034500724,0.000049354443,0.00026792163,0.99842596,0.00032994917,0.000008937156,0.0001499217],"study_design_scores_gemma":[0.0002909132,0.000079460246,0.017734997,0.0000071427994,0.000012194164,0.0000195367,0.000018511502,0.00004303663,0.9807256,0.00013217804,0.00083184545,0.00010461495],"about_ca_topic_score_codex":0.000024422277,"about_ca_topic_score_gemma":0.0000037177845,"teacher_disagreement_score":0.055763822,"about_ca_system_score_codex":0.000034047778,"about_ca_system_score_gemma":0.000042671338,"threshold_uncertainty_score":0.3688997},"labels":[],"label_agreement":null},{"id":"W2015516314","doi":"10.1016/j.molcel.2009.07.029","title":"Yeast RNase III Triggers Polyadenylation-Independent Transcription Termination","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute; Université de Sherbrooke","funders":"","keywords":"Biology; Polyadenylation; Yeast; RNase P; Transcription (linguistics); Genetics; Cleavage and polyadenylation specificity factor; Cell biology; Computational biology; RNA; Gene","score_opus":0.006395040190280976,"score_gpt":0.24094342735049648,"score_spread":0.2345483871602155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015516314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98166597,0.00048385098,0.011595597,0.00025496422,0.00006518738,0.00021545765,0.0000068064464,0.000017011853,0.0056951623],"genre_scores_gemma":[0.99476606,0.00005389202,0.00030384577,0.0003451441,0.000107012216,0.000008423142,0.00017755968,0.00001443543,0.0042236475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989715,0.000057146503,0.00016368627,0.00029362796,0.0002529446,0.00026105306],"domain_scores_gemma":[0.999514,0.0000019175013,0.00004640043,0.0002571867,0.000058307804,0.00012220582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015077267,0.00012753299,0.000092409384,0.00007686048,0.00007967369,0.00004484431,0.00014074097,0.000121698,0.000024727555],"category_scores_gemma":[0.000017278886,0.00013132303,0.00011129128,0.00009441367,0.000021597547,0.000007176041,0.000014856405,0.00010031716,0.000031201518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006821649,0.000071507384,0.000036857615,0.0000058010523,0.000007949037,0.00002863268,0.000027529504,0.00010831048,0.9870418,0.000043622676,0.00029485114,0.012264928],"study_design_scores_gemma":[0.0010049607,0.00028468014,0.0014706069,0.000006658192,0.0000118630305,0.00000878971,0.000039216724,0.0005130923,0.99169105,0.000057701305,0.004748182,0.00016317901],"about_ca_topic_score_codex":0.000019852989,"about_ca_topic_score_gemma":0.0000063177386,"teacher_disagreement_score":0.013100077,"about_ca_system_score_codex":0.00002494978,"about_ca_system_score_gemma":0.00004922939,"threshold_uncertainty_score":0.5355198},"labels":[],"label_agreement":null},{"id":"W2015747979","doi":"10.1016/j.molcel.2008.10.002","title":"Atomic Structure of the KEOPS Complex: An Ancient Protein Kinase-Containing Molecular Machine","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":100,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; Hospital for Sick Children; SickKids Foundation; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Center for Research Resources","keywords":"Biology; Methanococcus; Archaea; Protein subunit; Cell biology; Protein kinase A; Genetics; Kinase; Gene; Computational biology","score_opus":0.009369100293152015,"score_gpt":0.2038145705923531,"score_spread":0.1944454702992011,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015747979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942084,0.00026240782,0.0035982786,0.000048135542,0.00022225465,0.0003919394,0.0000427894,0.000046103432,0.0011796735],"genre_scores_gemma":[0.9960858,8.6678335e-7,0.0032121828,0.00054984615,0.00003328133,0.000006736746,0.000022407055,0.00002900424,0.000059831982],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850094,0.00017881498,0.0002627328,0.0003602954,0.00040086848,0.0002963698],"domain_scores_gemma":[0.99901175,0.000007175729,0.00017526739,0.0006401481,0.00008074786,0.000084912186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011391676,0.00020013985,0.00021577343,0.0000519035,0.00018910879,0.000023438468,0.00040250988,0.000096013675,0.00032368622],"category_scores_gemma":[0.000022667953,0.00014525947,0.000108602275,0.00021690957,0.000154249,0.00008073361,0.00011413024,0.00016877949,0.000012498728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000366554,0.000028267847,0.00041035507,0.000026149477,0.000004703902,0.00004791859,0.00027126726,0.0007003824,0.997657,0.00068111595,0.000057808975,0.00007835354],"study_design_scores_gemma":[0.00043366145,0.00014191837,0.003654649,0.000013220366,0.000019102894,0.00003297109,0.000033961536,0.00045422473,0.99370974,0.00064327626,0.0006909885,0.00017228689],"about_ca_topic_score_codex":0.00015579113,"about_ca_topic_score_gemma":0.000032108575,"teacher_disagreement_score":0.0039472827,"about_ca_system_score_codex":0.000041583065,"about_ca_system_score_gemma":0.00007417077,"threshold_uncertainty_score":0.59235096},"labels":[],"label_agreement":null},{"id":"W2016005076","doi":"10.1016/j.molcel.2014.05.012","title":"The Calcineurin Signaling Network Evolves via Conserved Kinase-Phosphatase Modules that Transcend Substrate Identity","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":118,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Calcineurin; Biology; Phosphatase; Kinase; Dephosphorylation; Cell biology; Phosphorylation; Biochemistry; Computational biology","score_opus":0.011054816560845131,"score_gpt":0.22372086381445785,"score_spread":0.2126660472536127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016005076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92926717,0.009494127,0.06002286,0.000118198026,0.00033407338,0.0002851784,0.000034539928,0.00004640686,0.0003974635],"genre_scores_gemma":[0.9978525,0.0000779795,0.0008088538,0.0005819766,0.00021756574,0.00003927779,0.00021536861,0.000065482716,0.00014101455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979086,0.0003355461,0.00029682394,0.00057035254,0.00031727226,0.00057141366],"domain_scores_gemma":[0.9986256,0.00006411176,0.00013944885,0.0008681387,0.00008591152,0.00021682876],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006071276,0.00031846977,0.00020311963,0.000018834442,0.0003365838,0.0001420007,0.0006045517,0.0001665659,0.000024006331],"category_scores_gemma":[0.00007638337,0.00027591598,0.00026867277,0.00012824732,0.00020505438,0.000009412912,0.00010673692,0.0001736974,0.000032005224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015475725,0.00008997036,0.0028977399,0.00005519654,0.00007365176,0.000068765825,0.000019618841,0.008541451,0.98570514,0.00041091605,0.0012878447,0.00069497305],"study_design_scores_gemma":[0.0007405197,0.00011807598,0.0006905567,0.000024275601,0.000083748324,0.000005203249,0.000019676387,0.0012318952,0.9888283,0.0012158852,0.006686729,0.00035511464],"about_ca_topic_score_codex":0.00005882717,"about_ca_topic_score_gemma":0.00006585701,"teacher_disagreement_score":0.06858533,"about_ca_system_score_codex":0.000014148061,"about_ca_system_score_gemma":0.00005277228,"threshold_uncertainty_score":0.9999693},"labels":[],"label_agreement":null},{"id":"W2016177577","doi":"10.1016/j.molcel.2007.03.008","title":"Activation of the Bacterial Sensor Kinase PhoQ by Acidic pH","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":275,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Periplasmic space; Histidine kinase; Divalent; Biology; Biochemistry; Antimicrobial peptides; Peptide; Histidine; Mutant; Biophysics; Chemistry; Escherichia coli; Amino acid; Gene","score_opus":0.004637603757081719,"score_gpt":0.1901029852162436,"score_spread":0.1854653814591619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016177577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943665,0.00015581066,0.0019049969,0.000117003714,0.00035419362,0.00012049615,0.000025475267,0.000015811014,0.0029397022],"genre_scores_gemma":[0.997141,0.000006877337,0.00007094505,0.00022979622,0.000018938694,0.0000010907794,0.00005167214,0.000012251737,0.0024674323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994337,0.00006442423,0.00014881876,0.0001313084,0.000025762536,0.00019601043],"domain_scores_gemma":[0.9996376,0.000030938816,0.000107807384,0.00018761873,0.00002683918,0.000009169767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010425377,0.0001003183,0.00012149166,0.000026423922,0.00007946394,0.0000064750666,0.00012438593,0.00013446825,0.0002662368],"category_scores_gemma":[0.00001564557,0.000075868265,0.000096123695,0.000068874935,0.00019817658,0.000036912246,0.000054532105,0.00013306967,0.00005033361],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008104508,0.00007470066,0.00009219216,0.000011062761,0.000021442525,0.000001876589,0.00008033791,0.0000019669737,0.99378884,0.000082779545,0.0050560846,0.00070768164],"study_design_scores_gemma":[0.00047930414,0.000038160077,0.0002584729,0.000012344088,0.000016145874,0.0000037480236,0.00013954549,2.73661e-7,0.9651345,0.000013431606,0.033820286,0.000083795065],"about_ca_topic_score_codex":0.00013536777,"about_ca_topic_score_gemma":0.0000037778227,"teacher_disagreement_score":0.028764203,"about_ca_system_score_codex":0.000015738455,"about_ca_system_score_gemma":0.000018922889,"threshold_uncertainty_score":0.3093818},"labels":[],"label_agreement":null},{"id":"W2016806069","doi":"10.1016/j.molcel.2014.03.039","title":"The Multifaceted Role of the Intestinal Microbiota in Colon Cancer","year":2014,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":338,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Colorectal cancer; Cancer; Computational biology; Cancer research; Bioinformatics; Genetics","score_opus":0.008517246980551223,"score_gpt":0.28656329818806353,"score_spread":0.2780460512075123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016806069","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045136064,0.9939464,0.000015162651,0.000048579375,0.00019200299,0.00074966875,0.000042122843,0.0000037019147,0.00048879406],"genre_scores_gemma":[0.003836558,0.99480915,0.00009088551,0.0001319138,0.00006131601,0.00007453433,0.00008498761,0.00005637769,0.0008542698],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998296,0.00036893078,0.0004952208,0.00039284304,0.0000918563,0.00035511857],"domain_scores_gemma":[0.9987132,0.000030931104,0.00039951425,0.0007427742,0.00006473886,0.00004885287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026585968,0.0003090827,0.0005828189,0.000040102408,0.000092090006,0.000019531439,0.0007295395,0.00036745897,0.000009802356],"category_scores_gemma":[0.00005315701,0.00018358887,0.00039313006,0.00019328011,0.00014774855,6.2680124e-7,0.00031042483,0.00037115152,0.000012295485],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015594864,0.000072354844,0.00004375583,0.0033840444,0.000058782498,0.0000026932003,0.0000338708,0.000011271348,0.80886227,0.000018337993,0.0012209851,0.18627602],"study_design_scores_gemma":[0.00020014623,0.000052243606,0.000018886716,0.0013593358,0.00010211757,0.000010009813,0.000011225149,0.0000050630338,0.03370328,0.0000037351138,0.96434075,0.00019321714],"about_ca_topic_score_codex":0.00017627973,"about_ca_topic_score_gemma":0.00032538452,"teacher_disagreement_score":0.96311975,"about_ca_system_score_codex":0.000051740783,"about_ca_system_score_gemma":0.00047469526,"threshold_uncertainty_score":0.74865365},"labels":[],"label_agreement":null},{"id":"W2018024152","doi":"10.1016/j.molcel.2014.04.026","title":"O-GlcNAcylation Regulates Cancer Metabolism and Survival Stress Signaling via Regulation of the HIF-1 Pathway","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":435,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Cancer Institute","keywords":"Biology; Unfolded protein response; Endoplasmic reticulum; Cell biology; Cancer cell; Carcinogenesis; GLUT1; Downregulation and upregulation; Signal transduction; Cancer research; Biochemistry; Cancer; Glucose uptake; Endocrinology; Gene; Genetics","score_opus":0.0062483586076948075,"score_gpt":0.22625059994798738,"score_spread":0.22000224134029256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018024152","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98715127,0.0009844472,0.010253548,0.00018461302,0.00010216236,0.00023394468,0.00001185477,0.0000067967894,0.0010713446],"genre_scores_gemma":[0.9988183,0.00003219493,0.00034948267,0.000053272503,0.000080634476,0.000014055718,0.000045464003,0.000019605754,0.0005870062],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894893,0.0001999063,0.00018313607,0.00025051186,0.0002563359,0.0001611889],"domain_scores_gemma":[0.99934745,0.000012247041,0.000114624294,0.00033309322,0.00014060538,0.000051976032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025299002,0.0001167084,0.00012165738,0.000038918588,0.00009019584,0.000021353833,0.00013920417,0.00011307246,0.000034603516],"category_scores_gemma":[0.000052457384,0.00009254377,0.0000736405,0.00012846566,0.00007823007,0.0000050144404,0.000106188454,0.000075987584,0.0000017053055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026616965,0.000020149408,0.0014302125,0.000033422486,0.0000152163175,2.0695329e-7,0.000039538685,0.0021467793,0.99128574,0.0002735768,0.000018185052,0.004710351],"study_design_scores_gemma":[0.00040925512,0.00003327158,0.015590641,0.00001459924,0.000014411519,6.3482605e-7,0.000011621402,0.0026497059,0.9761585,0.00039851613,0.0046107387,0.0001080916],"about_ca_topic_score_codex":0.0001060125,"about_ca_topic_score_gemma":0.00004951026,"teacher_disagreement_score":0.015127231,"about_ca_system_score_codex":0.0000074573627,"about_ca_system_score_gemma":0.000035616773,"threshold_uncertainty_score":0.37738255},"labels":[],"label_agreement":null},{"id":"W2018033103","doi":"10.1016/j.molcel.2011.10.019","title":"A Global Circadian Repressor Controls Antiphasic Expression of Metabolic Genes in Neurospora","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fonds de Recherche du Québec - Santé; Deutsche Forschungsgemeinschaft","keywords":"Biology; Repressor; Cell biology; Transcription factor; Gene; Biochemistry","score_opus":0.02276880691056193,"score_gpt":0.2367411997702428,"score_spread":0.21397239285968087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018033103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97412544,0.0036755498,0.00052317866,0.00001912299,0.00019484149,0.00033881774,0.0000260841,0.00003519683,0.021061752],"genre_scores_gemma":[0.99901736,0.00014942928,0.00027503783,0.00037524855,0.000018630535,0.000019992136,0.0000013207643,0.000021908063,0.00012109918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983342,0.000181249,0.0003355705,0.00052669446,0.00023946537,0.0003827882],"domain_scores_gemma":[0.9990972,0.000027175047,0.00015747744,0.000541473,0.000022788125,0.00015385075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012081335,0.00018050826,0.00031761042,0.00011818002,0.000035338482,0.000016435122,0.0002991436,0.000103245744,0.00008623206],"category_scores_gemma":[0.00010668934,0.00018045914,0.00013583836,0.00043636985,0.00010724021,0.000114052935,0.000074922165,0.00011111731,0.00004908619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049880324,0.0001638823,0.017131364,0.000017160306,0.0000013345983,0.0006366403,0.00027274556,0.00003384995,0.97453374,0.0060629775,0.000014784338,0.001081654],"study_design_scores_gemma":[0.0010154948,0.000040020434,0.037497777,0.00002039688,0.000014208726,0.00002507545,0.000016149588,0.000070601694,0.9582861,0.00032116278,0.0025285478,0.00016446057],"about_ca_topic_score_codex":0.00010135544,"about_ca_topic_score_gemma":0.0000050069025,"teacher_disagreement_score":0.024891878,"about_ca_system_score_codex":0.000011113427,"about_ca_system_score_gemma":0.000053245483,"threshold_uncertainty_score":0.73589104},"labels":[],"label_agreement":null},{"id":"W2018207496","doi":"10.1016/j.molcel.2015.03.013","title":"A 3′ External Transcribed Spacer in a tRNA Transcript Acts as a Sponge for Small RNAs to Prevent Transcriptional Noise","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":218,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transfer RNA; Internal transcribed spacer; RNA; Ribosomal RNA; Messenger RNA; Genetics; Gene","score_opus":0.02274330772677762,"score_gpt":0.24741407543545552,"score_spread":0.2246707677086779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018207496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80128926,0.0019804738,0.1921755,0.0008199829,0.00022834793,0.0014311955,0.00005156014,0.000019012226,0.0020046951],"genre_scores_gemma":[0.9811152,0.00003862401,0.014320896,0.0013064804,0.00013328796,0.0005366837,0.000060967905,0.00007961949,0.002408227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980465,0.00016165081,0.0003440249,0.00063040276,0.00028808948,0.00052929873],"domain_scores_gemma":[0.9990304,0.000010250509,0.000058816528,0.0003872201,0.00009919809,0.00041413147],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004890953,0.000327884,0.00028736173,0.00012375422,0.00004141257,0.000046306188,0.00032124924,0.0002479555,0.000043760676],"category_scores_gemma":[0.00005714002,0.00033897653,0.0003210125,0.00013273425,0.000028613267,0.0000075012563,0.000024706987,0.000112631045,0.00003502659],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001263414,0.00038785956,0.000016682521,0.00005127444,0.000031294312,0.00006533558,0.0006358755,0.0002697326,0.9944637,0.000405973,0.00015218374,0.002256693],"study_design_scores_gemma":[0.0023316748,0.0009932376,0.00007704495,0.000052996158,0.000045199184,0.000022086786,0.00010190448,0.00003627048,0.9094791,0.0011121931,0.08535158,0.00039670712],"about_ca_topic_score_codex":0.00006586753,"about_ca_topic_score_gemma":0.00016383652,"teacher_disagreement_score":0.17982598,"about_ca_system_score_codex":0.000045044548,"about_ca_system_score_gemma":0.00021299424,"threshold_uncertainty_score":0.99990624},"labels":[],"label_agreement":null},{"id":"W2018302034","doi":"10.1016/j.molcel.2014.05.021","title":"WIPI2 Links LC3 Conjugation with PI3P, Autophagosome Formation, and Pathogen Clearance by Recruiting Atg12–5-16L1","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":875,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; Cancer Research UK","keywords":"Autophagy; ATG16L1; Cell biology; ATG12; Autophagosome; Biology; Effector; Phosphatidylinositol; Endoplasmic reticulum; Biochemistry; ATG5; Signal transduction; Apoptosis","score_opus":0.003947345710606803,"score_gpt":0.20499025721176226,"score_spread":0.20104291150115544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018302034","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96494645,0.0020498647,0.02599812,0.00043836253,0.000037484195,0.00040192582,0.00000984066,0.00009690569,0.0060210247],"genre_scores_gemma":[0.99526334,0.00010212858,0.0012223144,0.0027198794,0.000065800115,0.000028056289,0.00011821774,0.00003653373,0.0004437257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990493,0.0000665366,0.00020261647,0.00024305527,0.00022488146,0.00021358617],"domain_scores_gemma":[0.99937373,0.000024472578,0.00011365569,0.00026199166,0.00008048687,0.00014563928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015010899,0.0001565872,0.0002013121,0.000046557318,0.00009671114,0.000032488773,0.00005963009,0.00013214577,0.000041871128],"category_scores_gemma":[0.000023206165,0.00013523505,0.000045125296,0.00010756726,0.00005911415,0.00011983554,0.000017747983,0.00019998424,0.000040648552],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046698883,0.00022974527,0.0021704284,0.00047605313,0.00009535243,0.00015043099,0.0012094232,0.00007180396,0.95647407,0.0011644869,0.0010406569,0.036450557],"study_design_scores_gemma":[0.008268977,0.0013030628,0.009645461,0.00038392487,0.00027845465,0.00010547901,0.0001988134,0.01149589,0.8909743,0.001435929,0.07526047,0.0006492905],"about_ca_topic_score_codex":0.000006449224,"about_ca_topic_score_gemma":6.0355165e-7,"teacher_disagreement_score":0.07421981,"about_ca_system_score_codex":0.000023852539,"about_ca_system_score_gemma":0.000029577537,"threshold_uncertainty_score":0.55147254},"labels":[],"label_agreement":null},{"id":"W2018382029","doi":"10.1016/j.molcel.2010.07.010","title":"DNA Repair Has a New FAN1 Club","year":2010,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"Biology; DNA; Genetics; DNA repair; Computational biology; Cell biology","score_opus":0.008968924006315085,"score_gpt":0.20814865019230755,"score_spread":0.19917972618599247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018382029","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09941206,0.0128883505,0.04303071,0.6553062,0.011031106,0.005557224,0.00047855027,0.001987026,0.17030875],"genre_scores_gemma":[0.0053686835,0.000086853994,0.01927018,0.83946407,0.007016333,0.000103504535,0.003482727,0.00059097586,0.12461667],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967133,0.00015277448,0.00043146661,0.0013755675,0.0005124296,0.000814484],"domain_scores_gemma":[0.9971761,0.0000116732535,0.00025110334,0.0022255941,0.00010949976,0.00022601151],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00018581483,0.00072092155,0.00048135317,0.00012783248,0.00010630841,0.0001166429,0.00086047343,0.0042463965,0.0002613373],"category_scores_gemma":[0.00007912439,0.00077070005,0.00088113075,0.00012299129,0.00012677044,0.0000030524284,0.00047981308,0.0025686792,0.0004190874],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009901473,0.000020658292,0.0000026998603,0.000054044427,0.00006444693,0.00061659113,0.000009248982,0.0000016781975,0.47401783,0.0000049522378,0.5249469,0.00025103215],"study_design_scores_gemma":[0.0003067259,0.00016128185,9.864615e-7,0.000013921366,0.000076911005,0.000038335307,0.0000019952734,0.000008307935,0.44830036,0.00014644874,0.55046415,0.00048053346],"about_ca_topic_score_codex":0.000070082584,"about_ca_topic_score_gemma":0.00002404643,"teacher_disagreement_score":0.18415785,"about_ca_system_score_codex":0.00003234225,"about_ca_system_score_gemma":0.0005348428,"threshold_uncertainty_score":0.99973243},"labels":[],"label_agreement":null},{"id":"W2019311422","doi":"10.1016/j.molcel.2011.06.033","title":"Circadian Conformational Change of the Neurospora Clock Protein FREQUENCY Triggered by Clustered Hyperphosphorylation of a Basic Domain","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":128,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fonds de Recherche du Québec - Santé; Deutsche Forschungsgemeinschaft","keywords":"Biology; Neurospora; Circadian clock; Phosphorylation; Casein kinase 1; Cell biology; Circadian rhythm; Biochemistry; Biophysics; Hyperphosphorylation; Kinase; Neurospora crassa; Protein kinase A; Neuroscience","score_opus":0.026894019538756708,"score_gpt":0.2011443688844411,"score_spread":0.1742503493456844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019311422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877504,0.00034739354,0.00029309292,0.00009399172,0.0001388423,0.0009881544,0.00009306136,0.000019055988,0.010275995],"genre_scores_gemma":[0.99902695,0.000007807722,0.00023003509,0.00041954883,0.000012951243,0.00005533282,0.00000795373,0.000022219472,0.00021719711],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986438,0.00014678322,0.0003908948,0.00024630304,0.0003400733,0.00023214209],"domain_scores_gemma":[0.99908215,0.00002197762,0.00034671812,0.00041417926,0.0000501315,0.00008484388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001430565,0.00014813636,0.00019051612,0.00007810686,0.00006811078,0.000009606743,0.00030077176,0.000101842306,0.00012960048],"category_scores_gemma":[0.000064158485,0.0001268478,0.00012939559,0.00034102032,0.00015951598,0.00014596099,0.000048957812,0.00014490148,0.000025691845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026869808,0.00009544789,0.0006605234,0.000054671287,0.0000027642698,0.000010814655,0.0018884453,0.0000014145771,0.98427254,0.0126315495,0.000045425546,0.0003095386],"study_design_scores_gemma":[0.0006917697,0.00007974483,0.0048196563,0.000030061134,0.000012408292,0.000007753632,0.000048540514,0.0000665532,0.99230486,0.0008104443,0.0009984047,0.00012980022],"about_ca_topic_score_codex":0.00010360215,"about_ca_topic_score_gemma":0.000002659985,"teacher_disagreement_score":0.011821105,"about_ca_system_score_codex":0.00002344119,"about_ca_system_score_gemma":0.000085600695,"threshold_uncertainty_score":0.51727027},"labels":[],"label_agreement":null},{"id":"W2020016210","doi":"10.1016/j.molcel.2011.04.005","title":"Genome-wide Regulation of 5hmC, 5mC, and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":625,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institute on Drug Abuse; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; University of Pennsylvania","keywords":"Biology; Embryonic stem cell; Gene; Cell biology; Stem cell; Gene expression; Genome; Regulation of gene expression; Genetics","score_opus":0.007868205985788402,"score_gpt":0.19372321332345496,"score_spread":0.18585500733766655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020016210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843284,0.005574858,0.008845871,0.000007207354,0.000036625846,0.00022502485,0.000019206245,0.0000065941254,0.00095622934],"genre_scores_gemma":[0.9966438,0.0004815689,0.0019602547,0.000038688777,0.000013862944,0.0000117561385,0.00009554562,0.000033466244,0.00072110415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891496,0.00010645506,0.0002727795,0.00037039156,0.00013265443,0.00020276512],"domain_scores_gemma":[0.9993334,0.000008145319,0.0001458497,0.00038048145,0.00004725203,0.00008486801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018756343,0.00016460581,0.00016118122,0.00007287732,0.000029599749,0.000009483029,0.00012409025,0.00018564318,0.00001589368],"category_scores_gemma":[0.000008230695,0.00017207793,0.00005869558,0.00007686555,0.000050315917,0.000005221746,0.00010369977,0.00007021426,0.0000039527154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046403286,0.00009525647,0.002467314,0.000033360804,0.000007681351,0.000003862878,0.000105366904,0.0002316947,0.9966675,0.000002869757,0.000028618331,0.00031006776],"study_design_scores_gemma":[0.00057400047,0.00017846504,0.0021155102,0.000007662646,0.000011442528,4.310445e-7,0.000026049733,0.00011399504,0.99555105,0.000067572226,0.0011690508,0.00018478867],"about_ca_topic_score_codex":0.000025412888,"about_ca_topic_score_gemma":0.0000063491193,"teacher_disagreement_score":0.012315369,"about_ca_system_score_codex":0.000012816484,"about_ca_system_score_gemma":0.000023110266,"threshold_uncertainty_score":0.70171344},"labels":[],"label_agreement":null},{"id":"W2020591166","doi":"10.1016/j.molcel.2011.08.021","title":"MicroRNA Destabilization Enables Dynamic Regulation of the miR-16 Family in Response to Cell-Cycle Changes","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":184,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Cell cycle; Biology; Psychological repression; Downregulation and upregulation; microRNA; Cell biology; Cell cycle checkpoint; Restriction point; Cell; Gene family; Gene; Genetics; Cell cycle progression; Gene expression","score_opus":0.007790035109362174,"score_gpt":0.20877800243224406,"score_spread":0.20098796732288188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020591166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933789,0.0007898917,0.0043348307,0.00008613476,0.00006763942,0.00047590607,0.0000148729005,0.000008362036,0.00084346446],"genre_scores_gemma":[0.9981747,0.000019391966,0.0012528384,0.00015918478,0.00001002109,0.000027765747,0.000054987977,0.000033490407,0.0002675723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998861,0.0002512897,0.00022110334,0.00031847096,0.00014221972,0.00020587331],"domain_scores_gemma":[0.9991701,0.000008715913,0.00012909318,0.0005454883,0.000088139765,0.000058419228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025686025,0.00014716241,0.00011228665,0.00009891499,0.000037234488,0.000008662505,0.0002292397,0.00013790655,0.000020913358],"category_scores_gemma":[0.00005777439,0.00013645444,0.00007597466,0.00025572462,0.000053608288,0.0000042457077,0.00012611816,0.000046681234,0.0000070625615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033360854,0.000099433884,0.0006737233,0.000042404736,0.0000050125923,0.000001545925,0.00021858398,0.000649769,0.99760044,0.000008522674,0.00010832722,0.00025862618],"study_design_scores_gemma":[0.00038744466,0.00010042764,0.0530393,0.00002681382,0.000016233182,0.0000011083288,0.00008062521,0.00017570844,0.9445389,0.00011923336,0.0013667333,0.00014745137],"about_ca_topic_score_codex":0.000055316115,"about_ca_topic_score_gemma":0.00013966684,"teacher_disagreement_score":0.053061523,"about_ca_system_score_codex":0.000062777726,"about_ca_system_score_gemma":0.00007535836,"threshold_uncertainty_score":0.55644506},"labels":[],"label_agreement":null},{"id":"W2020673367","doi":"10.1016/j.molcel.2009.06.023","title":"Two-Color Cell Array Screen Reveals Interdependent Roles for Histone Chaperones and a Chromatin Boundary Regulator in Histone Gene Repression","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Toronto","funders":"Canadian Institutes of Health Research; Ontario Genomics Institute; Genome Canada","keywords":"Biology; Chromatin; Histone code; Histone H1; Histone H2A; Genetics; Chromatin remodeling; Histone methyltransferase; Histone methylation; Cell biology; Histone; ChIA-PET; Bivalent chromatin; SAP30; Nucleosome; Gene expression; Gene; DNA methylation","score_opus":0.004222218213341196,"score_gpt":0.2396497848067389,"score_spread":0.2354275665933977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020673367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98276913,0.0062320093,0.0077467263,0.0001997184,0.00008016049,0.0005810554,0.00003980474,0.000018499233,0.002332917],"genre_scores_gemma":[0.97999114,0.00015946779,0.017964147,0.00046220212,0.0000846277,0.000041049723,0.0002847052,0.000051064955,0.0009616049],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982897,0.000091186484,0.0004314376,0.00066352263,0.0001501875,0.0003739388],"domain_scores_gemma":[0.9990399,0.000009002306,0.00020737696,0.0005576942,0.00005684838,0.00012921676],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033437475,0.0002925718,0.00030871714,0.00008834179,0.00010844914,0.000048528003,0.0002623207,0.00018459612,0.000008289552],"category_scores_gemma":[0.000023736271,0.0003057192,0.00013057496,0.0000626406,0.00007714218,0.0000067567257,0.00012591842,0.0001123466,0.00000389339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011853049,0.00017322942,0.000088426554,0.000055026434,0.000011808005,0.000021337994,0.00014683034,0.00023666603,0.9973171,0.000037745376,0.00028077132,0.0015125803],"study_design_scores_gemma":[0.0021941045,0.00058248395,0.001556829,0.000050680632,0.000035280915,0.000023822178,0.00008172433,0.0009644371,0.9905695,0.00069625716,0.0028141548,0.0004307355],"about_ca_topic_score_codex":0.000026310512,"about_ca_topic_score_gemma":0.000043420758,"teacher_disagreement_score":0.010217421,"about_ca_system_score_codex":0.00008093431,"about_ca_system_score_gemma":0.000057966274,"threshold_uncertainty_score":0.9999395},"labels":[],"label_agreement":null},{"id":"W2020972228","doi":"10.1016/j.molcel.2008.12.019","title":"Cdk1/Cdc28-Dependent Activation of the Major Triacylglycerol Lipase Tgl4 in Yeast Links Lipolysis to Cell-Cycle Progression","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":237,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Medical Research Council; Bundesministerium für Wissenschaft und Forschung; Austrian Science Fund","keywords":"Biology; Lipolysis; Cyclin-dependent kinase 1; Lipase; Yeast; Perilipin; Cell cycle; Adipose triglyceride lipase; Biochemistry; Cell biology; Enzyme; Cell; Adipose tissue","score_opus":0.004289397704454153,"score_gpt":0.225460747953791,"score_spread":0.22117135024933685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020972228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963618,0.00041246967,0.0007848345,0.00039079715,0.00011955507,0.00049939065,0.000011979165,0.000010163886,0.0014089961],"genre_scores_gemma":[0.99775755,0.00001999415,0.0008988725,0.00063056184,0.0001444023,0.000025966221,0.000026454205,0.000022884351,0.00047328678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854195,0.0001453972,0.00032765054,0.00040616092,0.00029670578,0.00028214444],"domain_scores_gemma":[0.99905545,0.000007461227,0.00015502308,0.0006200853,0.000060175964,0.00010178389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002166615,0.00020211807,0.00021528265,0.00009471191,0.000058861497,0.000023769733,0.00036241027,0.00028788132,0.000017354914],"category_scores_gemma":[0.00006785666,0.00015158592,0.00017382285,0.00027250632,0.000027278275,0.000006231882,0.00013850673,0.00016956466,0.000014012173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018997774,0.00036226536,0.0002525384,0.00002161913,0.000011408937,0.0000031628997,0.00012213527,0.00010818949,0.9841113,0.0000047007966,0.00013141945,0.014681291],"study_design_scores_gemma":[0.00091237715,0.00014145808,0.0025005038,0.000034189463,0.00004008206,9.1863234e-7,0.00004911138,0.000032656342,0.9907611,0.000018028848,0.0053233616,0.00018619845],"about_ca_topic_score_codex":0.000030502904,"about_ca_topic_score_gemma":0.000011305509,"teacher_disagreement_score":0.014495092,"about_ca_system_score_codex":0.000018053453,"about_ca_system_score_gemma":0.00007588119,"threshold_uncertainty_score":0.6181494},"labels":[],"label_agreement":null},{"id":"W2022458507","doi":"10.1016/j.molcel.2013.04.023","title":"MITOL Regulates Endoplasmic Reticulum-Mitochondria Contacts via Mitofusin2","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":292,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Sumitomo Foundation; Naito Foundation","keywords":"MFN2; Endoplasmic reticulum; Biology; Cell biology; Mitochondrion; Ubiquitin ligase; GTPase; Ubiquitin; Inner mitochondrial membrane; Biochemistry; mitochondrial fusion; Mitochondrial DNA","score_opus":0.004330379075439792,"score_gpt":0.19358444200128794,"score_spread":0.18925406292584815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022458507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9590217,0.000975924,0.015762756,0.0003786022,0.0016830107,0.0007921311,0.000010339243,0.0000651174,0.02131041],"genre_scores_gemma":[0.9824813,0.00006334676,0.0053485483,0.0018761166,0.00045265022,0.00013366173,0.00026507588,0.00007709566,0.009302218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805975,0.00018209965,0.00035308415,0.0006888641,0.00020393656,0.00051229325],"domain_scores_gemma":[0.9986629,0.000018050303,0.00013455136,0.00077375514,0.00016959244,0.00024114443],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007937075,0.00033621775,0.00026995604,0.00008253663,0.00010699876,0.00006928677,0.00029541703,0.0003933596,0.00077721773],"category_scores_gemma":[0.000077310084,0.00033015799,0.00022772599,0.00013616038,0.000108672706,0.000008757752,0.00013861932,0.0001926594,0.0011632498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046985337,0.0000768062,0.00031656728,0.000018485192,0.000033775366,0.00003921808,0.00002884545,0.000040864285,0.9769361,0.00006559419,0.021820445,0.0005763382],"study_design_scores_gemma":[0.00096200296,0.00029513042,0.00023982726,0.000008360585,0.00003268282,0.000079473095,0.000029145705,0.00012729905,0.89338404,0.00021540087,0.104262315,0.00036432574],"about_ca_topic_score_codex":0.000079173835,"about_ca_topic_score_gemma":0.000019957792,"teacher_disagreement_score":0.08355204,"about_ca_system_score_codex":0.0000148461795,"about_ca_system_score_gemma":0.00006117342,"threshold_uncertainty_score":0.99991506},"labels":[],"label_agreement":null},{"id":"W2022768508","doi":"10.1016/s1097-2765(04)00234-5","title":"Involvement of Transcription Termination Factor 2 in Mitotic Repression of Transcription Elongation","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of General Medical Sciences","keywords":"Biology; RNA polymerase II; Mitosis; Transcription (linguistics); Cell biology; Molecular biology; RNA polymerase II holoenzyme; Elongation factor; Transcription factor; RNA polymerase; Genetics; RNA; Promoter; Gene; Gene expression","score_opus":0.006885654475654791,"score_gpt":0.2114447476069339,"score_spread":0.20455909313127912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022768508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9772264,0.00032906074,0.021878958,0.000032615164,0.00007312653,0.00022935319,0.000014627793,0.0000035628568,0.000212335],"genre_scores_gemma":[0.997909,0.000114157745,0.0016721821,0.000022087484,0.000011311995,0.000009856186,0.00021582679,0.000014821807,0.000030721618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991657,0.00004110854,0.00033197523,0.00021154263,0.00013967002,0.00010998705],"domain_scores_gemma":[0.9995457,0.0000016433733,0.00014636734,0.00021715491,0.000062802465,0.000026359903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000976163,0.000105340565,0.00012537741,0.00008145016,0.00001462798,0.000004935317,0.00009360686,0.00012770246,0.0000061456763],"category_scores_gemma":[0.000008961587,0.00011347328,0.00009043093,0.00008625737,0.00002875298,0.000005566232,0.000013837626,0.000050528324,7.020503e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032671185,0.00018710706,0.00047448475,0.00014126586,0.0000075203625,0.000001637729,0.0003334912,0.0067238123,0.9905965,0.000059429974,0.0000017181246,0.0014403673],"study_design_scores_gemma":[0.0010798835,0.00023189401,0.0072644646,0.000056056037,0.000014342081,8.845408e-7,0.00007628747,0.0007398607,0.9900213,0.00036801185,0.000043183296,0.000103862476],"about_ca_topic_score_codex":0.000056604316,"about_ca_topic_score_gemma":0.000051964726,"teacher_disagreement_score":0.020682674,"about_ca_system_score_codex":0.000036430414,"about_ca_system_score_gemma":0.000041542353,"threshold_uncertainty_score":0.4627306},"labels":[],"label_agreement":null},{"id":"W2024406051","doi":"10.1016/j.molcel.2011.09.020","title":"Live Cell Imaging of Telomerase RNA Dynamics Reveals Cell Cycle-Dependent Clustering of Telomerase at Elongating Telomeres","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Terry Fox Foundation; Canada Research Chairs; McGill University","keywords":"Telomere; Telomerase; Biology; Telomerase RNA component; RNA; Cell cycle; Cell biology; Telomere-binding protein; Cell division; Telomerase reverse transcriptase; Cell; DNA; Molecular biology; Genetics; Gene; DNA-binding protein; Transcription factor","score_opus":0.010622161524256058,"score_gpt":0.2224535965170997,"score_spread":0.21183143499284365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024406051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9651159,0.002956098,0.0024837705,0.000058540438,0.00030676904,0.0009416462,0.00010312088,0.00014116296,0.027892986],"genre_scores_gemma":[0.9832827,0.0003688864,0.0139370365,0.00033705277,0.00007287033,0.000032103635,0.000092099996,0.00020396292,0.0016733274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99497145,0.0002436803,0.0016235407,0.0010490594,0.0010497891,0.0010624641],"domain_scores_gemma":[0.9963102,0.00017759929,0.0010784491,0.001415039,0.00044863025,0.0005701169],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006255031,0.00076279405,0.001296907,0.00061929104,0.00019736355,0.000028268456,0.0006027415,0.00026783213,0.0006286665],"category_scores_gemma":[0.0001337535,0.0007734184,0.0005279762,0.0006347549,0.00036075123,0.000205818,0.0005640037,0.0006125523,0.00012690482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004806715,0.0011663539,0.05129937,0.0026194993,0.00009422124,0.0014576298,0.004456676,0.00024821342,0.9318586,0.000021782671,0.00013439632,0.0061625787],"study_design_scores_gemma":[0.002957609,0.0004040106,0.0063517913,0.00049865263,0.00038575055,0.00010156129,0.002416649,0.005398004,0.980544,0.000081844075,0.00006736709,0.00079281814],"about_ca_topic_score_codex":0.001156054,"about_ca_topic_score_gemma":0.000088548535,"teacher_disagreement_score":0.048685335,"about_ca_system_score_codex":0.00034030265,"about_ca_system_score_gemma":0.00020544826,"threshold_uncertainty_score":0.99947166},"labels":[],"label_agreement":null},{"id":"W2025861321","doi":"10.1016/j.molcel.2007.12.012","title":"Dcn1 Functions as a Scaffold-Type E3 Ligase for Cullin Neddylation","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":192,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"Argonne National Laboratory","keywords":"Cullin; Neddylation; NEDD8; Biology; Ubiquitin ligase; Ubiquitin; Cell biology; DNA ligase; Protein subunit; Biochemistry; Enzyme","score_opus":0.01583731658606499,"score_gpt":0.2378178090142916,"score_spread":0.2219804924282266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025861321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9717404,0.001291159,0.01366224,0.00013841194,0.0001960942,0.00049030315,0.000027037711,0.000035017987,0.012419322],"genre_scores_gemma":[0.9891334,0.00010712981,0.0022583373,0.0006949926,0.00022082223,0.00008749274,0.00052036805,0.000043864737,0.0069336025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990125,0.000046140533,0.00017462115,0.00036973922,0.00012650283,0.00027051245],"domain_scores_gemma":[0.9993022,0.000009105281,0.0000674341,0.00036417073,0.00014031619,0.000116747055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010651709,0.00017000973,0.000121793586,0.000048485006,0.0001896924,0.00001803344,0.00013363635,0.00017744262,0.00007082517],"category_scores_gemma":[0.00006918629,0.0001804164,0.00016494095,0.000121457204,0.000051641644,0.000003836902,0.00005367211,0.000067105524,0.00018975405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011693078,0.00008837988,0.00012875356,0.00002256802,0.000024739795,0.00001904805,0.0000469486,0.00017808814,0.9931491,0.00012342485,0.005385047,0.00071696186],"study_design_scores_gemma":[0.00060558907,0.00048690467,0.000042433767,0.000005060093,0.000023504228,0.000027682168,0.000021452828,0.00014504186,0.83380926,0.00015669983,0.16448286,0.00019349984],"about_ca_topic_score_codex":0.000016364584,"about_ca_topic_score_gemma":0.0000036576987,"teacher_disagreement_score":0.15933985,"about_ca_system_score_codex":0.000012692058,"about_ca_system_score_gemma":0.00012398468,"threshold_uncertainty_score":0.73571676},"labels":[],"label_agreement":null},{"id":"W2027092386","doi":"10.1016/j.molcel.2004.08.011","title":"Arginine Methylation Regulates the Cytokine Response","year":2004,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Methylation; NFAT; Arginine; Cytokine; Computational biology; Cell biology; Gene; Molecular biology; Genetics; Transcription factor; Amino acid","score_opus":0.005640595569920102,"score_gpt":0.21819363637861783,"score_spread":0.21255304080869772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027092386","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2054064,0.015014572,0.011637445,0.7602199,0.0016113264,0.0021076116,0.00019333356,0.00014517961,0.0036642523],"genre_scores_gemma":[0.47702152,0.0005646764,0.0018292392,0.4546199,0.008787168,0.0002915341,0.011490298,0.00069616816,0.044699505],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99750906,0.00044367288,0.00039395274,0.00075803656,0.0004446483,0.0004506494],"domain_scores_gemma":[0.9981453,0.00004081919,0.00031416366,0.0012909626,0.0001553626,0.000053387586],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00043239244,0.00046949627,0.00028646592,0.00013104717,0.0001289562,0.000065833214,0.0004531121,0.0013157874,0.00006118084],"category_scores_gemma":[0.000089233545,0.00039850464,0.0003356042,0.00024478065,0.00014635928,0.0000035531318,0.00016184582,0.00082135486,0.0000717578],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002187204,0.000014658004,0.0000018357297,0.000037474598,0.00009338221,0.00007112184,0.000024299463,0.005081334,0.7026137,0.0000039631586,0.291383,0.0004565366],"study_design_scores_gemma":[0.000413997,0.00013153274,0.000042963497,0.000023687238,0.00008554944,0.000020587797,0.000002877474,0.000040991894,0.45361704,0.00014082437,0.54519963,0.0002803273],"about_ca_topic_score_codex":0.000030535488,"about_ca_topic_score_gemma":0.0000068378986,"teacher_disagreement_score":0.3056,"about_ca_system_score_codex":0.00013643221,"about_ca_system_score_gemma":0.00031915036,"threshold_uncertainty_score":0.9999807},"labels":[],"label_agreement":null},{"id":"W2027145418","doi":"10.1016/j.molcel.2004.09.035","title":"A Robust Toolkit for Functional Profiling of the Yeast Genome","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":324,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Cancer Institute; National Human Genome Research Institute","keywords":"Biology; Saccharomyces cerevisiae; Genome; Computational biology; Gene knockout; Genetics; DNA microarray; Gene; Ploidy; Yeast; Gene expression profiling; Mutant; Functional genomics; Synthetic lethality; Genetic screen; Phenotype; Microarray analysis techniques; Genomics; Gene expression","score_opus":0.020543840667396215,"score_gpt":0.224651256833234,"score_spread":0.20410741616583777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027145418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9489801,0.0007012298,0.046924897,0.00012778763,0.000107772205,0.00038038564,0.000053469685,0.0000039984798,0.0027203867],"genre_scores_gemma":[0.995785,0.000012385487,0.003218871,0.00012283506,0.00009461312,0.000040103845,0.00007391853,0.000020137406,0.00063214387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992799,0.000020415351,0.00012211621,0.00021644504,0.00016877562,0.00019234861],"domain_scores_gemma":[0.9995111,0.0000028954025,0.00004132486,0.0002818434,0.00011725076,0.000045553898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009466145,0.00009060324,0.00007347941,0.000020803564,0.00006022275,0.000010980061,0.0002019292,0.00007890627,0.000009605171],"category_scores_gemma":[0.00003071107,0.00007025786,0.00014642245,0.000082140745,0.00006324853,0.0000010428413,0.00012843276,0.00006422222,0.000006108778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005095958,0.000058229896,0.00014740716,0.00004043529,0.00001834494,9.1635286e-7,0.000008057415,0.018392995,0.9808373,0.0003087852,0.000038288093,0.00009829593],"study_design_scores_gemma":[0.00060919946,0.00014146866,0.0004939278,0.00000542575,0.000010800607,0.0000036181632,0.000016341699,0.000056367244,0.9942749,0.00035666823,0.003942567,0.000088672765],"about_ca_topic_score_codex":0.0000042275765,"about_ca_topic_score_gemma":0.0000025017207,"teacher_disagreement_score":0.04680492,"about_ca_system_score_codex":0.000012457719,"about_ca_system_score_gemma":0.00014753612,"threshold_uncertainty_score":0.28650326},"labels":[],"label_agreement":null},{"id":"W2027291164","doi":"10.1016/j.molcel.2010.02.022","title":"Postnatal Deamidation of 4E-BP2 in Brain Enhances Its Association with Raptor and Alters Kinetics of Excitatory Synaptic Transmission","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":109,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Ontario Institute for Cancer Research; Montreal Neurological Institute and Hospital; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Université de Montréal; McGill University Health Centre","funders":"National Center for Research Resources; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Savoy Foundation; Howard Hughes Medical Institute","keywords":"Biology; Excitatory postsynaptic potential; Deamidation; Neurotransmission; Kinetics; Neuroscience; Association (psychology); Transmission (telecommunications); Biochemistry; Inhibitory postsynaptic potential; Receptor","score_opus":0.010716849847894594,"score_gpt":0.2712831076653188,"score_spread":0.2605662578174242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027291164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99894637,0.000034963745,0.00024357575,0.00029280694,0.000077564146,0.00022835947,0.000005423486,0.000008099452,0.00016283242],"genre_scores_gemma":[0.99952626,0.00005985986,0.00007366105,0.00024931348,0.000005019552,0.0000062930244,5.893351e-7,0.000010763779,0.000068230445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987612,0.00019858242,0.00018552192,0.00028545022,0.00037008908,0.00019917816],"domain_scores_gemma":[0.99938524,0.0002741859,0.00012736708,0.0001028751,0.000046168043,0.00006416058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022318067,0.000088295536,0.00013067317,0.00016288865,0.00002759293,0.000011359452,0.00016629313,0.000064467415,0.000017432661],"category_scores_gemma":[0.0002519156,0.00007838529,0.000023421779,0.00031672264,0.00015963188,0.00011996312,0.000030472886,0.00023955619,0.000002209955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072001145,0.00011879689,0.00073894503,0.00005265338,0.0000012813108,0.000063155414,0.00012681796,0.000020605023,0.998463,0.000032477412,0.000007360833,0.0003029286],"study_design_scores_gemma":[0.00057661306,0.0004145329,0.002267534,0.000012510095,0.0000065889985,0.0000065664576,0.000010139977,0.0007078498,0.99584246,0.00001414772,0.000069604765,0.000071468836],"about_ca_topic_score_codex":0.0000036742697,"about_ca_topic_score_gemma":0.000002139939,"teacher_disagreement_score":0.0026205336,"about_ca_system_score_codex":0.000011799652,"about_ca_system_score_gemma":0.000039982748,"threshold_uncertainty_score":0.3196459},"labels":[],"label_agreement":null},{"id":"W2027548638","doi":"10.1016/j.molcel.2011.08.006","title":"p53-Dependent Transcription and Tumor Suppression Are Not Affected in Set7/9-Deficient Mice","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Deutscher Akademischer Austauschdienst","keywords":"Biology; Transcription (linguistics); Transcription factor; Cell biology; Cancer research; Genetics; Gene","score_opus":0.014743422459319004,"score_gpt":0.21106195929920613,"score_spread":0.19631853683988712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027548638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905988,0.001561348,0.0021240015,0.00012777829,0.00022909274,0.0007396279,0.000018865143,0.00008313128,0.004517351],"genre_scores_gemma":[0.99833727,0.000051388335,0.0007224463,0.0005387045,0.000016523156,0.000040466224,0.00003452872,0.000056066747,0.00020263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983826,0.000116031515,0.00028400458,0.00050386507,0.0003596569,0.0003538149],"domain_scores_gemma":[0.9992828,0.000009005099,0.00009909921,0.00036694945,0.00006011659,0.00018203944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017366164,0.00023744442,0.0003047989,0.00021771234,0.000040151976,0.000015109716,0.00008803861,0.00015646368,0.00012206066],"category_scores_gemma":[0.000030399378,0.0002324426,0.00010415759,0.00022940106,0.00005131851,0.000046566933,0.000046931018,0.00036578847,0.000053663076],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032697903,0.0005545347,0.0003772565,0.00017344955,0.000015739213,0.0015891376,0.00092094543,0.00003105703,0.99537003,0.000021275575,0.00012496246,0.00049460365],"study_design_scores_gemma":[0.004032106,0.0003212204,0.013505534,0.00027309623,0.00012633609,0.00012674,0.00020754285,0.00059006416,0.9798374,0.000020333702,0.0007096707,0.000249965],"about_ca_topic_score_codex":0.00017748585,"about_ca_topic_score_gemma":0.00005432253,"teacher_disagreement_score":0.015532669,"about_ca_system_score_codex":0.00012414707,"about_ca_system_score_gemma":0.00005642283,"threshold_uncertainty_score":0.9478734},"labels":[],"label_agreement":null},{"id":"W2027740340","doi":"10.1016/j.molcel.2012.09.001","title":"Interdomain Allostery Promotes Assembly of the Poly(A) mRNA Complex with PABP and eIF4G","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; EIF4G; Messenger RNA; Cell biology; Poly(A)-binding protein; Allosteric regulation; Biochemistry; Translation (biology); Gene; Enzyme","score_opus":0.01074909634548108,"score_gpt":0.23925244958728256,"score_spread":0.2285033532418015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027740340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940808,0.0014636185,0.0014863833,0.00016811998,0.000022118667,0.00018411699,0.000005254501,0.000003842324,0.0025857908],"genre_scores_gemma":[0.998099,0.000017366689,0.0009400578,0.0002252713,0.000035175202,0.000007723058,0.000012997541,0.000019297304,0.0006430808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918413,0.00009312412,0.00011086398,0.00016482043,0.00016077326,0.00028628475],"domain_scores_gemma":[0.99947196,0.00000821602,0.000057518395,0.0003237791,0.000038118513,0.000100423684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001629013,0.000114038456,0.000108134314,0.000022526528,0.000050537423,0.000016950555,0.00017531888,0.00006187559,0.0000070462447],"category_scores_gemma":[0.00002214871,0.000074255906,0.00005542417,0.000062879575,0.000112572234,0.000004079437,0.0002115467,0.00008159269,0.0000022374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004298163,0.000057507426,0.010839351,0.000033967724,0.000030164147,0.0000033268764,0.00004363976,0.0000014763242,0.98791385,0.00003588491,0.00018758462,0.0008102526],"study_design_scores_gemma":[0.000391815,0.00024519511,0.008711506,0.000018807406,0.000013923758,0.000019799012,0.000064493506,0.00005395468,0.98743045,0.000008410813,0.0029329637,0.00010867398],"about_ca_topic_score_codex":0.00002595063,"about_ca_topic_score_gemma":0.000010522753,"teacher_disagreement_score":0.0040182755,"about_ca_system_score_codex":0.000005532514,"about_ca_system_score_gemma":0.000028831697,"threshold_uncertainty_score":0.3028068},"labels":[],"label_agreement":null},{"id":"W2027913461","doi":"10.1016/j.molcel.2010.05.011","title":"Multiple Interactions Recruit MLL1 and MLL1 Fusion Proteins to the HOXA9 Locus in Leukemogenesis","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":228,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; Canadian Institutes of Health Research; Leukemia and Lymphoma Society; Charles H. Revson Foundation","keywords":"Biology; Locus (genetics); Genetics; Fusion protein; Computational biology; Gene","score_opus":0.014547249081724065,"score_gpt":0.2779362120781484,"score_spread":0.26338896299642434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027913461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868742,0.00015690815,0.0014609748,0.0063359835,0.000135489,0.0016424101,0.0000064457904,0.000039862723,0.0033476823],"genre_scores_gemma":[0.99197,0.000033111024,0.0038223378,0.00094919535,0.00010265885,0.00022279612,0.000014351934,0.000044471162,0.0028410654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986458,0.000094059666,0.00021364584,0.00037654763,0.00030925707,0.00036068723],"domain_scores_gemma":[0.9989153,0.000093513896,0.000038847553,0.00062694115,0.0000949626,0.00023043086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003459004,0.000165931,0.00019782595,0.00023498436,0.00010928254,0.000042891425,0.00019787891,0.00011041046,0.00015700811],"category_scores_gemma":[0.00035743203,0.00012161782,0.000068868576,0.00044681501,0.00006907606,0.000050934814,0.00024760584,0.00073775224,0.00023851998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015807593,0.00010654912,0.0032999755,0.000036203364,0.000012944635,0.00019079541,0.0004775185,0.00002282647,0.9787691,0.000016598624,0.0012944567,0.015614946],"study_design_scores_gemma":[0.0030453596,0.00029372337,0.020962527,0.00009455341,0.000054705564,0.00010154081,0.00038833648,0.0033761952,0.7432,0.000044096563,0.22813082,0.00030813005],"about_ca_topic_score_codex":0.00094121083,"about_ca_topic_score_gemma":0.0019226684,"teacher_disagreement_score":0.2355691,"about_ca_system_score_codex":0.00016363907,"about_ca_system_score_gemma":0.00018460675,"threshold_uncertainty_score":0.4959431},"labels":[],"label_agreement":null},{"id":"W2028128317","doi":"10.1016/j.molcel.2007.10.024","title":"Crystal Structure of Human XLF: A Twist in Nonhomologous DNA End-Joining","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":141,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; DNA repair protein XRCC4; Non-homologous end joining; DNA ligase; DNA; Genetics; DNA repair; DNA mismatch repair","score_opus":0.0048064377033126635,"score_gpt":0.22742341059150367,"score_spread":0.22261697288819102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028128317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884487,0.0003135775,0.0036083562,0.000008977815,0.000092007176,0.0001757949,0.000016445661,0.000015407375,0.0073207356],"genre_scores_gemma":[0.9967073,0.0000031844622,0.0026486423,0.00018773729,0.00005105365,0.0000027306223,0.000112755704,0.000041758693,0.00024484235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986356,0.000057479952,0.0003324055,0.000401435,0.00019136355,0.00038171024],"domain_scores_gemma":[0.9992753,0.000007096645,0.00012705712,0.0004561307,0.0000505597,0.00008383273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002334969,0.00019852287,0.0002098466,0.000109706845,0.0000332825,0.000010058523,0.00024945787,0.00025363782,0.000056742134],"category_scores_gemma":[0.00003014777,0.00021553783,0.00012109042,0.00013658001,0.00007428253,0.0000024391472,0.0001591614,0.00015061432,0.0000031438553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037230417,0.00007135088,0.00080376025,0.0000338061,0.000016580692,0.00017296817,0.00009717502,0.00004470182,0.99810433,0.00022697083,0.000045237546,0.00034586285],"study_design_scores_gemma":[0.00068375695,0.00035530876,0.0006893132,0.000013209783,0.000012770864,0.000027252,0.00009403396,0.000012823887,0.99641794,0.00033045645,0.0011453229,0.00021779198],"about_ca_topic_score_codex":0.00004860334,"about_ca_topic_score_gemma":0.00017269682,"teacher_disagreement_score":0.008258597,"about_ca_system_score_codex":0.000024218774,"about_ca_system_score_gemma":0.000049078364,"threshold_uncertainty_score":0.8789378},"labels":[],"label_agreement":null},{"id":"W2029130907","doi":"10.1016/j.molcel.2006.06.026","title":"Substrate and Functional Diversity of Lysine Acetylation Revealed by a Proteomics Survey","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Sirtuins and Resveratrol in Medicine","field":"Medicine","cited_by":1485,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; ImmuneChem (Canada)","funders":"National Cancer Institute; McKnight Foundation; Welch Foundation","keywords":"Biology; Acetylation; Lysine; Proteomics; Chromatin; Biochemistry; Histone; Mitochondrion; Cell biology; DNA; Amino acid; Gene","score_opus":0.00996471881658779,"score_gpt":0.20229012403201846,"score_spread":0.19232540521543068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029130907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926118,0.00069420104,0.0049289335,0.00018368477,0.000040664243,0.00024844863,0.0000141131595,0.0000118280095,0.0012663234],"genre_scores_gemma":[0.9976984,0.000031246727,0.0006551266,0.00010850127,0.00003878769,0.0000022312436,0.00026912426,0.000008868479,0.0011876684],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99931526,0.000048711496,0.00015744068,0.00015347304,0.00022204214,0.00010304953],"domain_scores_gemma":[0.999618,0.000019550129,0.000073919866,0.00012298994,0.000112774185,0.000052744028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002486254,0.00008528426,0.00018060932,0.000046956866,0.000054735014,0.0000042171523,0.000024242343,0.000070350536,0.00004075104],"category_scores_gemma":[0.000022559272,0.000071533694,0.000039059414,0.00012340117,0.00006837922,0.000020642496,0.00003972042,0.00009254022,0.0000022753768],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021930676,0.00012103494,0.34348652,0.000058039477,0.000022555776,0.000021189457,0.000017630728,0.0000506451,0.65306026,0.000017440054,0.0028730761,0.000052325526],"study_design_scores_gemma":[0.0030013733,0.00022751604,0.8373745,0.000027502909,0.00010878351,0.00001170954,0.000015380596,0.00065077876,0.15819429,0.0000703138,0.00022449919,0.00009332229],"about_ca_topic_score_codex":0.0005258763,"about_ca_topic_score_gemma":0.000018417433,"teacher_disagreement_score":0.49486595,"about_ca_system_score_codex":0.000018378252,"about_ca_system_score_gemma":0.000026878892,"threshold_uncertainty_score":0.29170594},"labels":[],"label_agreement":null},{"id":"W2029786576","doi":"10.1016/j.molcel.2008.08.025","title":"Mus81-Dependent Double-Strand DNA Breaks at In Vivo-Generated Cruciform Structures in S. cerevisiae","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Canada Research Chairs; Hospital for Sick Children; University of Toronto; University of New Brunswick","funders":"National Cancer Institute","keywords":"Biology; Cruciform; Holliday junction; DNA; DNA supercoil; Genetics; Chromatin; Palindrome; Transposase; Nuclease; Palindromic sequence; Cell biology; Tn3 transposon; Inverted repeat; DNA repair; Transposable element; DNA replication; Gene; Genome","score_opus":0.008931498735569303,"score_gpt":0.215263691895216,"score_spread":0.20633219315964668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029786576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98946786,0.001317141,0.0002911812,0.00003306222,0.00013957678,0.0004289731,0.00002384591,0.000025064131,0.0082733175],"genre_scores_gemma":[0.99691373,0.00022180873,0.00062752585,0.00027840887,0.000055383985,0.00003819025,0.000121687306,0.00006161002,0.001681664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804413,0.0000868289,0.00040259154,0.0006807333,0.0002799418,0.0005057636],"domain_scores_gemma":[0.9991254,0.0000045339357,0.00009476293,0.00059134833,0.000048130012,0.00013581569],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015818677,0.00032666966,0.00029455897,0.00014264547,0.00006583896,0.000020520203,0.00031436534,0.00034030894,0.00016380324],"category_scores_gemma":[0.000011524844,0.00033451032,0.00013891284,0.00020381798,0.00006331362,0.0000061550277,0.00020771977,0.00018152743,0.000022721642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023332797,0.00009282491,0.001628814,0.000029307008,0.000018084167,0.0005356211,0.00009767589,0.0008199698,0.9960189,0.00004614169,0.0002687976,0.00021053533],"study_design_scores_gemma":[0.0031660774,0.00014140458,0.001102502,0.000012344618,0.0000103608445,0.00009611695,0.000023566932,0.0000909279,0.9900605,0.00008183037,0.0048352177,0.0003791409],"about_ca_topic_score_codex":0.00021604798,"about_ca_topic_score_gemma":0.00062137906,"teacher_disagreement_score":0.007445882,"about_ca_system_score_codex":0.00008873496,"about_ca_system_score_gemma":0.000094607385,"threshold_uncertainty_score":0.9999107},"labels":[],"label_agreement":null},{"id":"W2030071974","doi":"10.1016/j.molcel.2007.03.011","title":"Mapping Protein-Protein Interactions for the Yeast ABC Transporter Ycf1p by Integrated Split-Ubiquitin Membrane Yeast Two-Hybrid Analysis","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health; Ontario Genomics Institute; Genome Canada","keywords":"Biology; Yeast; Ubiquitin; Two-hybrid screening; Saccharomyces cerevisiae; Transporter; Cell biology; Membrane protein; Biochemistry; Membrane; Computational biology; Genetics; Gene","score_opus":0.00973853146199161,"score_gpt":0.261014787946183,"score_spread":0.2512762564841914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030071974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68695396,0.000608355,0.30924925,0.00019608333,0.000060454906,0.0008487178,0.00024078057,0.000017202401,0.0018251892],"genre_scores_gemma":[0.9920488,0.000017428049,0.0016291208,0.00020416566,0.00013542856,0.00018962928,0.0009042341,0.000055105356,0.0048160967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998107,0.00007118721,0.00038131414,0.00056384347,0.00029773594,0.0005788743],"domain_scores_gemma":[0.9989141,0.000016892463,0.00010562241,0.0005742953,0.00021577814,0.00017326757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051385915,0.00028087402,0.00023640544,0.00016494075,0.00019636772,0.00007852657,0.00042497032,0.00010214787,0.00017752967],"category_scores_gemma":[0.00003338933,0.0002265063,0.0004132353,0.00048793142,0.00011178332,0.0000056189338,0.00008004609,0.00027106964,0.000026242617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018031939,0.00011103809,0.000056756155,0.00004721197,0.00039035658,0.000019692476,0.000046417746,0.00031724529,0.99482447,0.000023741202,0.00031686111,0.0036658994],"study_design_scores_gemma":[0.0006195587,0.00011050502,0.00007018949,0.000020155217,0.00012666795,0.0000054546213,0.00017243002,0.0009818681,0.9340235,0.000039075716,0.063564315,0.00026627778],"about_ca_topic_score_codex":0.00010642777,"about_ca_topic_score_gemma":0.00011034624,"teacher_disagreement_score":0.30762014,"about_ca_system_score_codex":0.000031089643,"about_ca_system_score_gemma":0.00007298205,"threshold_uncertainty_score":0.9236659},"labels":[],"label_agreement":null},{"id":"W2030775866","doi":"10.1016/j.molcel.2014.04.004","title":"Accessibility of Different Histone H3-Binding Domains of UHRF1 Is Allosterically Regulated by Phosphatidylinositol 5-Phosphate","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Structural Genomics Consortium; University of Toronto","funders":"Cancer Research UK; Wellcome Trust","keywords":"Biology; Histone; Allosteric regulation; Phosphatidylinositol; Phosphate; Histone H3; Biochemistry; Cell biology; Signal transduction; Receptor; Gene","score_opus":0.007340960563729201,"score_gpt":0.26135156556112615,"score_spread":0.25401060499739697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030775866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882683,0.0033526574,0.0037877075,0.00026028836,0.00014501979,0.00043426498,0.000020384547,0.000035521305,0.0036958614],"genre_scores_gemma":[0.99543357,0.00008482066,0.0015669775,0.00042455734,0.000024689069,0.0000082875995,0.00006719692,0.00004183158,0.0023480973],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981072,0.00009383371,0.0006282374,0.0004117624,0.00044884457,0.0003101135],"domain_scores_gemma":[0.9985114,0.00003881108,0.00037800273,0.00071110815,0.00014774298,0.0002129439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019703334,0.00025155616,0.00074876734,0.00007567965,0.00003693761,0.000007558163,0.00021352679,0.00016286042,0.00025300574],"category_scores_gemma":[0.000052983472,0.00021201679,0.00021614823,0.00019949174,0.00014463472,0.000050046347,0.0001038397,0.00015624816,0.000016220723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019069617,0.00053368177,0.0035654882,0.0002880861,0.000106710984,0.000019924813,0.0003587955,0.000001259179,0.9889238,0.00015885249,0.000988955,0.00486375],"study_design_scores_gemma":[0.0021227107,0.00032367263,0.00964013,0.00009543154,0.00044730908,0.000003926612,0.000015662785,0.00015881777,0.9804392,0.00017268087,0.0063980673,0.00018238592],"about_ca_topic_score_codex":0.00007220966,"about_ca_topic_score_gemma":0.0000010594941,"teacher_disagreement_score":0.008484595,"about_ca_system_score_codex":0.00004432956,"about_ca_system_score_gemma":0.00004241915,"threshold_uncertainty_score":0.8645794},"labels":[],"label_agreement":null},{"id":"W2031899577","doi":"10.1016/j.molcel.2010.06.021","title":"PoxA, YjeK, and Elongation Factor P Coordinately Modulate Virulence and Drug Resistance in Salmonella enterica","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":170,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; Salmonella enterica; Virulence; Pathogenicity island; Mutant; Transfer RNA; Salmonella; Virulence factor; Gene; Genetics; Elongation factor; Microbiology; Cell biology; Escherichia coli; RNA; Bacteria; Ribosome","score_opus":0.0041274438972957106,"score_gpt":0.2017357027305089,"score_spread":0.19760825883321317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031899577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994377,0.001471269,0.0025224497,0.00017837701,0.00007893743,0.00020117394,0.000008604288,0.000008834635,0.0011533222],"genre_scores_gemma":[0.99495673,0.00023430726,0.003687765,0.0001331443,0.000022423726,0.000018989136,0.000013007005,0.000023115126,0.0009105183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990736,0.00007387282,0.00015527276,0.00039944693,0.000098161436,0.00019964567],"domain_scores_gemma":[0.9995478,0.000010302079,0.000066335946,0.0002650634,0.000029061217,0.00008147406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001459288,0.00015681208,0.0001285631,0.000043197306,0.000051345527,0.00003938346,0.000115885014,0.00013055389,0.00001324453],"category_scores_gemma":[0.000036392965,0.00015991849,0.00003139833,0.000058240414,0.00006383367,0.0000059778527,0.00008423487,0.00011521112,0.0000046190694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004596297,0.000022289041,0.0007908415,0.000026287618,0.00000500277,0.000018461344,0.00006939736,0.0000018308485,0.99655914,0.00009996674,0.000032790034,0.0023280515],"study_design_scores_gemma":[0.00033728936,0.00003871479,0.0030897618,0.000014996795,0.000005462839,0.0000046084506,0.000014448767,0.00004107526,0.9890528,0.00067691784,0.00652364,0.00020031437],"about_ca_topic_score_codex":0.000027383974,"about_ca_topic_score_gemma":0.000082420396,"teacher_disagreement_score":0.0075063487,"about_ca_system_score_codex":0.0000045432193,"about_ca_system_score_gemma":0.000016099879,"threshold_uncertainty_score":0.6521287},"labels":[],"label_agreement":null},{"id":"W2032366675","doi":"10.1016/j.molcel.2006.10.014","title":"The X-Ray Structure of a BAK Homodimer Reveals an Inhibitory Zinc Binding Site","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":237,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec; McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Health Canada; McGill University","keywords":"Biology; Cell biology; Mitochondrion; Programmed cell death; Zinc finger; Peptide; Binding site; Plasma protein binding; Zebrafish; Zinc; Xenopus; Apoptosis; Molecular biology; Biochemistry; Chemistry; Transcription factor; Gene","score_opus":0.0029030832919839785,"score_gpt":0.1936355578249459,"score_spread":0.19073247453296194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032366675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939481,0.00080655795,0.0036139959,0.00006043258,0.0001511613,0.00020147763,0.000025914767,0.00001126602,0.0011811093],"genre_scores_gemma":[0.9970341,0.000012430654,0.000487798,0.000095276504,0.0001741926,0.0000054328675,0.0003590624,0.000022415767,0.0018093463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914616,0.00011359206,0.00019755999,0.00023996922,0.000136576,0.00016615976],"domain_scores_gemma":[0.9994381,0.0000064681376,0.00011122784,0.00032336428,0.00007427201,0.00004653801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012923623,0.00012218581,0.00009053122,0.000035881912,0.00012812675,0.000025155441,0.00009669283,0.00015114884,0.000026127616],"category_scores_gemma":[0.00001371625,0.00009312074,0.000097321514,0.00009125569,0.00008116722,0.0000035213486,0.000047304675,0.000077189565,0.0000073277674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034569115,0.000031307172,0.00045531557,0.000013245262,0.000010834107,0.00000208229,0.000009985086,0.00065457704,0.9965507,0.00008851042,0.0016092978,0.0005396096],"study_design_scores_gemma":[0.00034622755,0.00010320474,0.0013571241,0.000006064047,0.000019163686,0.0000035911037,0.000019985673,0.00013981732,0.94869477,0.00019225285,0.048980966,0.00013684104],"about_ca_topic_score_codex":0.000027407443,"about_ca_topic_score_gemma":0.000026115975,"teacher_disagreement_score":0.047855902,"about_ca_system_score_codex":0.000010422172,"about_ca_system_score_gemma":0.00003895888,"threshold_uncertainty_score":0.37973535},"labels":[],"label_agreement":null},{"id":"W2032945651","doi":"10.1016/j.molcel.2006.01.031","title":"Short RNAs Repress Translation after Initiation in Mammalian Cells","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":736,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Science Foundation; National Institutes of Health; National Cancer Institute; Canadian Institutes of Health Research; U.S. Public Health Service","keywords":"Biology; Translation (biology); Gene silencing; Polysome; Internal ribosome entry site; Translational regulation; microRNA; Protein biosynthesis; Cell biology; Ribosome; Eukaryotic translation; Untranslated region; Start codon; Messenger RNA; Psychological repression; Eukaryotic initiation factor; RNA; Molecular biology; Genetics; Gene; Gene expression","score_opus":0.008050061794779809,"score_gpt":0.2382614882627989,"score_spread":0.23021142646801906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032945651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9839726,0.000895143,0.006940743,0.000059072674,0.00003712718,0.00019003823,0.000006086668,0.0000075437592,0.00789161],"genre_scores_gemma":[0.99801034,0.000027252701,0.00068374333,0.000113278715,0.00006580767,0.000035762972,0.0001450628,0.000021714404,0.0008970388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990427,0.00007210329,0.00018214819,0.00029226593,0.00015738346,0.00025343135],"domain_scores_gemma":[0.9996399,0.0000038980884,0.000021824386,0.00025380554,0.000032342636,0.000048193353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014310384,0.0001089269,0.00008311346,0.00006801935,0.000023272556,0.000028755967,0.000097598306,0.00012143827,0.000019000294],"category_scores_gemma":[0.000004993346,0.00011746111,0.000068659836,0.00009546218,0.00002288894,0.000005176328,0.000027762628,0.00008800999,0.000015342073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006355664,0.000050724735,0.0035302904,0.000016425967,0.0000028778666,0.00007880192,0.000011685722,0.0006580418,0.99317,0.000008725155,0.00015314712,0.002255711],"study_design_scores_gemma":[0.0003530882,0.00005641676,0.00941623,0.000007098575,0.000004923529,0.0000019215383,0.000008740801,0.0002985964,0.9842783,0.000051192408,0.0053808,0.00014270036],"about_ca_topic_score_codex":0.00013699944,"about_ca_topic_score_gemma":0.00015481566,"teacher_disagreement_score":0.014037703,"about_ca_system_score_codex":0.000014424452,"about_ca_system_score_gemma":0.000022268148,"threshold_uncertainty_score":0.47899252},"labels":[],"label_agreement":null},{"id":"W2033269651","doi":"10.1016/s1097-2765(02)00461-6","title":"RAC Protein Directs the Complete Removal of the 3′ External Transcribed Spacer by the Pac1 Nuclease","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Nuclease; Biology; Schizosaccharomyces pombe; RNase P; Schizosaccharomyces; Cleavage (geology); Ribosomal RNA; Molecular biology; Cell biology; Mutant; Biochemistry; DNA; RNA; Gene","score_opus":0.011031352475026108,"score_gpt":0.21087511154658353,"score_spread":0.19984375907155744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033269651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98702866,0.0036929387,0.0021317548,0.0023991324,0.000041092102,0.0005596836,0.000027305332,0.0000061249125,0.004113285],"genre_scores_gemma":[0.9897123,0.00005749017,0.0001948272,0.00064535433,0.000048974784,0.000025825848,0.0000063219945,0.000027564742,0.009281345],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873275,0.00022910337,0.00015946258,0.00023872548,0.0003275836,0.000312407],"domain_scores_gemma":[0.9991086,0.000013637125,0.00007610037,0.0006884959,0.00005165399,0.000061500396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002279048,0.00014694095,0.000109997134,0.000011413972,0.00018480723,0.00003665126,0.0005241133,0.00007189055,0.000067660214],"category_scores_gemma":[0.000050723396,0.00007444935,0.00020664108,0.00010984808,0.00021292901,0.000002422827,0.00009175353,0.0001991371,0.000012183436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038659135,0.00006518391,0.000024749716,0.000013958814,0.000025015284,0.000016513044,0.000067678026,0.000032424712,0.9956919,0.000054847136,0.002868257,0.001100797],"study_design_scores_gemma":[0.0005234121,0.00008942104,0.00010548814,0.000017653425,0.000017131555,0.000028716242,0.000045470322,0.0005811845,0.9233826,0.00002998335,0.07507409,0.00010487023],"about_ca_topic_score_codex":0.000099968245,"about_ca_topic_score_gemma":0.000018486258,"teacher_disagreement_score":0.07230934,"about_ca_system_score_codex":0.000008592906,"about_ca_system_score_gemma":0.000020843365,"threshold_uncertainty_score":0.30359563},"labels":[],"label_agreement":null},{"id":"W2034341688","doi":"10.1016/j.molcel.2006.06.001","title":"The Human and Mouse Complement of SH2 Domain Proteins—Establishing the Boundaries of Phosphotyrosine Signaling","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":306,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"SH2 domain; Biology; Signal transduction; Phosphotyrosine-binding domain; Cell biology; Effector; GRB2; Computational biology; Signaling proteins; Protein–protein interaction; SH3 domain; HAMP domain; Signal transducing adaptor protein; Phosphorylation; Protein domain; Tyrosine kinase; Biochemistry; Gene","score_opus":0.0051267858626424835,"score_gpt":0.21287226978309254,"score_spread":0.20774548392045006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034341688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96690536,0.026685825,0.005021793,0.00021313371,0.000031430358,0.0006266375,0.00008132728,0.000008017847,0.000426488],"genre_scores_gemma":[0.9972132,0.00003523356,0.0022905285,0.000074136115,0.000038707916,0.0000470271,0.00012793938,0.00002556264,0.00014770117],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988332,0.00009973648,0.0003540595,0.00023970478,0.00023314687,0.0002401721],"domain_scores_gemma":[0.9991015,0.000026021286,0.00024520923,0.0004940303,0.0001030492,0.000030146384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042995613,0.0001639064,0.00016049303,0.000019100795,0.00038896696,0.0001302993,0.0003311254,0.000060540187,0.0000065730333],"category_scores_gemma":[0.000044590335,0.00011151174,0.000078619836,0.00008739253,0.00059757143,0.0000054867314,0.00025711834,0.00008807413,3.5957927e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003860828,0.000054050648,0.00037574169,0.000049353916,0.000024303668,0.0000026647115,0.000040350093,0.00008426408,0.98712283,0.011284503,0.0007625096,0.00016084494],"study_design_scores_gemma":[0.00047609457,0.0001708745,0.00016747265,0.000017761235,0.000022563003,0.0000018945511,0.00009303428,0.000008536356,0.96667045,0.001591437,0.03065771,0.000122172],"about_ca_topic_score_codex":0.00066086196,"about_ca_topic_score_gemma":0.00010946132,"teacher_disagreement_score":0.030307816,"about_ca_system_score_codex":0.000009515451,"about_ca_system_score_gemma":0.00006022143,"threshold_uncertainty_score":0.45473167},"labels":[],"label_agreement":null},{"id":"W2034427729","doi":"10.1016/j.molcel.2008.12.004","title":"Small-Molecule Inhibitors of HIF-2a Translation Link Its 5′UTR Iron-Responsive Element to Oxygen Sensing","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":190,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; National Institutes of Health; Dana-Farber/Harvard Cancer Center; McKnight Foundation","keywords":"Translation (biology); Biology; Untranslated region; Psychological repression; Cell biology; Eukaryotic translation; PI3K/AKT/mTOR pathway; Hypoxia (environmental); Protein biosynthesis; Five prime untranslated region; Three prime untranslated region; Messenger RNA; Signal transduction; Genetics; Gene expression; Oxygen; Gene; Chemistry","score_opus":0.01626710250719936,"score_gpt":0.2278735102071587,"score_spread":0.21160640769995934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034427729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.980248,0.0071715564,0.008521193,0.00038501056,0.00053706224,0.0005822481,0.00003126502,0.00001978653,0.0025039054],"genre_scores_gemma":[0.99243695,0.0006109931,0.0047040954,0.0007380353,0.0006713287,0.000014698073,0.0001213648,0.00006456249,0.00063800486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983264,0.000118075004,0.00038755342,0.00051301386,0.0002674674,0.00038749835],"domain_scores_gemma":[0.99902594,0.000009175485,0.00013256336,0.0004512597,0.00019147624,0.00018960856],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015725383,0.00026812658,0.00027277324,0.00012375883,0.000095711075,0.000012399637,0.00017510066,0.00019894686,0.000025590813],"category_scores_gemma":[0.000033001023,0.00029810224,0.00022824529,0.00022267693,0.000055431017,0.000004323814,0.0000911607,0.000115287105,0.000025118688],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013198411,0.000049513932,0.000020760564,0.00003567118,0.00003629567,0.00002094483,0.00034293128,0.000337724,0.99023134,0.00001107059,0.0013669061,0.007414837],"study_design_scores_gemma":[0.0008738404,0.00023328837,0.00015003684,0.00001535375,0.000049659186,0.0000151010445,0.0000903933,0.000061877254,0.8920877,0.0000061159167,0.10611955,0.00029707453],"about_ca_topic_score_codex":0.000045965215,"about_ca_topic_score_gemma":0.000040112172,"teacher_disagreement_score":0.10475264,"about_ca_system_score_codex":0.000020819385,"about_ca_system_score_gemma":0.00018146783,"threshold_uncertainty_score":0.99994713},"labels":[],"label_agreement":null},{"id":"W2034490095","doi":"10.1016/j.molcel.2011.06.035","title":"A Pre-mRNA Degradation Pathway that Selectively Targets Intron-Containing Genes Requires the Nuclear Poly(A)-Binding Protein","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Cancer Research UK; Wellcome Trust","keywords":"Biology; Intron; Precursor mRNA; RNA splicing; Messenger RNA; Polyadenylation; Cell biology; Gene expression; Molecular biology; Nonsense-mediated decay; RNA-binding protein; Nuclear export signal; Gene; Nuclear protein; Cell nucleus; RNA; Genetics; Transcription factor","score_opus":0.01768864892711925,"score_gpt":0.2297999135668005,"score_spread":0.21211126463968125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034490095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98822224,0.0016873726,0.005515782,0.000078145,0.000047130427,0.0005258352,0.0000060437937,0.000028321096,0.0038891379],"genre_scores_gemma":[0.99556917,0.00004825529,0.002252805,0.00013029859,0.00007268902,0.00007009307,0.000040724557,0.000055567012,0.0017603699],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843943,0.00019614802,0.00018311696,0.0004273466,0.00025484752,0.0004990996],"domain_scores_gemma":[0.9992711,0.000008401,0.00011778112,0.00040970143,0.000077417455,0.00011560512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035003593,0.00021105102,0.00014056714,0.000062560466,0.00026602147,0.00006949807,0.000383736,0.00013863272,0.000038128648],"category_scores_gemma":[0.00007229621,0.00016570052,0.00012024912,0.00009188728,0.00008517415,0.000014145531,0.00019674422,0.00019595477,0.000023190047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019222175,0.00004682414,0.000591641,0.000017278133,0.00005162211,0.000027893791,0.0002564588,0.0000043144964,0.99209607,0.0002955545,0.000069934096,0.0063502085],"study_design_scores_gemma":[0.0003703557,0.00046464484,0.00040220146,0.000018212533,0.0000120940695,0.0000094457155,0.00033138305,0.00021350752,0.99415874,0.000067952984,0.003734872,0.00021655693],"about_ca_topic_score_codex":0.00018702996,"about_ca_topic_score_gemma":0.000031723222,"teacher_disagreement_score":0.007346966,"about_ca_system_score_codex":0.00003450513,"about_ca_system_score_gemma":0.00010180725,"threshold_uncertainty_score":0.6757071},"labels":[],"label_agreement":null},{"id":"W2034614265","doi":"10.1016/j.molcel.2008.07.002","title":"Lysine Acetylation: Codified Crosstalk with Other Posttranslational Modifications","year":2008,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":987,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Cancer Institute","keywords":"SUMO protein; Acetylation; Lysine; Crosstalk; Biology; Histone; Histone-modifying enzymes; Chromatin; Cell biology; Phosphorylation; Ubiquitin; Epigenetics; Biochemistry; Histone methyltransferase; DNA; Gene; Amino acid","score_opus":0.03433144724179447,"score_gpt":0.3184787982262896,"score_spread":0.2841473509844951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034614265","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003426282,0.9791742,0.007819241,0.000047158454,0.00005968877,0.0009491321,0.00028626475,0.00003362311,0.011288081],"genre_scores_gemma":[0.00068841997,0.9863763,0.0019915,0.000080580525,0.0002470312,0.00025282128,0.0033696226,0.0002140787,0.006779655],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99747074,0.00021531658,0.00050519867,0.00084346853,0.00053367944,0.00043159752],"domain_scores_gemma":[0.9983003,0.000025675423,0.00024360078,0.0010118189,0.00023995108,0.00017862675],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010622825,0.0005338689,0.0006882278,0.00018950058,0.00022188894,0.000057652243,0.00043495794,0.00054477016,0.000091796646],"category_scores_gemma":[0.000027250826,0.00047088612,0.00048151048,0.00041905642,0.00028242168,0.0000053586027,0.000087829656,0.0003723165,0.00023982368],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063024584,0.0033623416,0.000021643164,0.018855803,0.003665323,0.0011377471,0.000581367,0.003178284,0.27740127,0.0010693554,0.062359788,0.6277368],"study_design_scores_gemma":[0.00045259774,0.00012887827,6.494844e-7,0.00032796254,0.00012900356,0.00014264508,0.0000031690095,0.000013582249,0.01039489,0.0000027591277,0.9878749,0.00052891514],"about_ca_topic_score_codex":0.00001778281,"about_ca_topic_score_gemma":0.000011880599,"teacher_disagreement_score":0.9255152,"about_ca_system_score_codex":0.00007410015,"about_ca_system_score_gemma":0.0008686825,"threshold_uncertainty_score":0.9997743},"labels":[],"label_agreement":null},{"id":"W2034699659","doi":"10.1016/s1097-2765(03)00046-7","title":"Structural Basis for Specific Binding of the Gads SH3 Domain to an RxxK Motif-Containing SLP-76 Peptide","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":131,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Canada Research Chairs; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Hospital for Sick Children; University of Toronto; SickKids Foundation; Western University","funders":"","keywords":"Polyproline helix; SH3 domain; Biology; Peptide; Binding selectivity; Plasma protein binding; Binding site; Signal transducing adaptor protein; Docking (animal); Biophysics; Biochemistry; Computational biology; Cell biology; Proto-oncogene tyrosine-protein kinase Src; Gene; Signal transduction","score_opus":0.012549915776273438,"score_gpt":0.2175128201843416,"score_spread":0.20496290440806816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034699659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915365,0.0010699957,0.0019215031,0.00012078245,0.000947168,0.0005218255,0.000036757476,0.000035588124,0.0038098558],"genre_scores_gemma":[0.99513286,0.00000830432,0.0020601505,0.00023781916,0.000019239284,0.000029954515,0.000043033364,0.00004146564,0.0024271868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981769,0.0003755969,0.0003757954,0.0004431042,0.000051176616,0.00057742954],"domain_scores_gemma":[0.998997,0.00010211875,0.00016484804,0.0006236299,0.000073270465,0.000039153936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031058746,0.00026256574,0.00035314172,0.00012779537,0.00028994778,0.000020175778,0.00047379255,0.00026838572,0.00039326458],"category_scores_gemma":[0.000060577775,0.00020584447,0.0002372161,0.00021560337,0.00017748447,0.00005403763,0.000105547224,0.00027965798,0.00011665599],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011529967,0.000060482562,0.0007517263,0.00001750237,0.00007027821,0.000007662045,0.0007706823,0.000060550556,0.99391747,0.0032535573,0.0003540227,0.0006207748],"study_design_scores_gemma":[0.0012070198,0.00039423016,0.0003232119,0.000020749003,0.000040289,0.00003618272,0.0010749128,0.0000029391665,0.9541246,0.00062212656,0.041905485,0.0002482295],"about_ca_topic_score_codex":0.000039468116,"about_ca_topic_score_gemma":0.000018448962,"teacher_disagreement_score":0.041551463,"about_ca_system_score_codex":0.000056408753,"about_ca_system_score_gemma":0.000058837053,"threshold_uncertainty_score":0.8394094},"labels":[],"label_agreement":null},{"id":"W2035329781","doi":"10.1016/j.molcel.2005.02.025","title":"Fusion of Hairpin Telomeres by the B. burgdorferi Telomere Resolvase ResT","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Tn3 transposon; Telomere; Biology; Recombinase; Telomere-binding protein; Borrelia burgdorferi; Genome; Genetics; Replicon; DNA; Transposable element; Recombination; Gene; DNA-binding protein","score_opus":0.004941407521830412,"score_gpt":0.20857482704354297,"score_spread":0.20363341952171254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035329781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9666928,0.021212714,0.00014836426,0.0006439644,0.00018959498,0.00027557212,0.00006643239,0.000084339445,0.010686223],"genre_scores_gemma":[0.99664026,0.00012270932,0.00004598201,0.0005146057,0.000026390791,0.000022569166,0.00008191054,0.000029361277,0.0025162091],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879885,0.00024470346,0.00028337308,0.0002885648,0.000063164545,0.000321374],"domain_scores_gemma":[0.9991061,0.000085719956,0.00013467879,0.0005745988,0.00006645921,0.000032412445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014129005,0.0001924605,0.00021804156,0.00007571237,0.00015940332,0.000012970383,0.00031585572,0.00017864771,0.0009073185],"category_scores_gemma":[0.000075739255,0.00014457355,0.00015220966,0.00017646405,0.0002657715,0.000045491295,0.0001296538,0.00023632376,0.00057344354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071309194,0.00028934728,0.0010715047,0.00001863069,0.000065697095,0.000011746555,0.000107795924,0.000050808114,0.95069754,0.00018209555,0.042462476,0.00497103],"study_design_scores_gemma":[0.000680283,0.00013457505,0.0016145856,0.000014897258,0.000058234997,0.000019704758,0.00007495236,0.0000041668413,0.77990717,0.00004069329,0.21729422,0.00015654051],"about_ca_topic_score_codex":0.00033241414,"about_ca_topic_score_gemma":0.000059069764,"teacher_disagreement_score":0.17483173,"about_ca_system_score_codex":0.000036152178,"about_ca_system_score_gemma":0.000055121658,"threshold_uncertainty_score":0.9934501},"labels":[],"label_agreement":null},{"id":"W2035457633","doi":"10.1016/j.molcel.2012.03.012","title":"PARP1 Parylation Promotes Silent Locus Transmission in the Nucleolus: The Suspicion Confirmed","year":2012,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centre hospitalier de l'Université Laval; Hôtel-Dieu de Québec","funders":"","keywords":"Biology; Nucleolus; PARP1; Chromatin; Gene silencing; Genetics; Cell biology; CTCF; Transcription (linguistics); Transcription factor; DNA; Gene; Cytoplasm","score_opus":0.018659501817940752,"score_gpt":0.26408672831806923,"score_spread":0.2454272265001285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035457633","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022496855,0.009669288,0.0044138245,0.9464793,0.00049925543,0.00370886,0.00002102723,0.00009772356,0.012613843],"genre_scores_gemma":[0.46134323,0.00033648222,0.00015345769,0.53429896,0.0017574766,0.00038207351,0.00063841755,0.00012583987,0.00096405816],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972316,0.0005734152,0.00045835786,0.00040062368,0.0008323556,0.0005036379],"domain_scores_gemma":[0.9986805,0.00016300454,0.00022077422,0.00080052926,0.00007309578,0.000062110965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057067897,0.000376365,0.00038247614,0.00012429732,0.0001062011,0.000044904908,0.0003189917,0.00062719436,0.0004874707],"category_scores_gemma":[0.000015540392,0.00021706583,0.00025074786,0.0002462495,0.00013567,0.000048250877,0.000021127289,0.001835609,0.00011603095],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002804585,0.000443534,0.00026435743,0.0009578369,0.00012459328,0.0013967382,0.0056391265,0.000034670258,0.07898179,0.00007156371,0.9004639,0.011341463],"study_design_scores_gemma":[0.0019396911,0.00018119242,0.00021175061,0.00036295885,0.00020890382,0.00005261166,0.00008061295,0.0001283655,0.0476575,0.00028477155,0.94861573,0.00027589023],"about_ca_topic_score_codex":0.000064966145,"about_ca_topic_score_gemma":0.0000018083931,"teacher_disagreement_score":0.43884635,"about_ca_system_score_codex":0.00015976737,"about_ca_system_score_gemma":0.00011948739,"threshold_uncertainty_score":0.88516873},"labels":[],"label_agreement":null},{"id":"W2035991083","doi":"10.1016/j.molcel.2007.10.035","title":"FOXO3a Is Activated in Response to Hypoxic Stress and Inhibits HIF1-Induced Apoptosis via Regulation of CITED2","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"FOXO transcription factor regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":278,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"Johnson and Johnson","keywords":"Biology; Transcription factor; Apoptosis; Cell biology; Hypoxia (environmental); Transcription (linguistics); Oxidative stress; DNA damage; Regulation of gene expression; Cancer research; Gene; DNA; Endocrinology; Biochemistry; Chemistry","score_opus":0.0076969556884544975,"score_gpt":0.22922694640779293,"score_spread":0.22152999071933843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035991083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98696727,0.00008537546,0.0121584525,0.00014305221,0.000049882758,0.00032371838,0.000014384706,0.000011924846,0.00024595944],"genre_scores_gemma":[0.99877065,0.000005036289,0.0007950582,0.0001631543,0.000015428568,0.000006419126,0.00007620474,0.000029101484,0.00013896846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987813,0.00010682629,0.00030989657,0.00037258214,0.00019985344,0.00022952678],"domain_scores_gemma":[0.999374,0.000015882424,0.000096228425,0.00031351118,0.0000968339,0.00010355796],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031728635,0.00016617792,0.00015204845,0.00024709656,0.00002686163,0.000012669881,0.000091656235,0.00022113493,0.000013802896],"category_scores_gemma":[0.00004582039,0.0001900362,0.000058493984,0.00033126902,0.000032697382,0.000008463666,0.000045322693,0.00007581548,0.0000039604874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009000233,0.00007763525,0.0011965325,0.000029083794,0.0000134254915,0.0000018925106,0.00019299582,0.0001771289,0.9957062,0.0000055948503,0.000030090509,0.0016693888],"study_design_scores_gemma":[0.000832919,0.00025903797,0.043966625,0.000030432218,0.000010592918,0.0000014241704,0.00003880329,0.000060562303,0.9539667,0.000025442623,0.0006255066,0.00018196387],"about_ca_topic_score_codex":0.000041282303,"about_ca_topic_score_gemma":0.000034160737,"teacher_disagreement_score":0.042770095,"about_ca_system_score_codex":0.000034331988,"about_ca_system_score_gemma":0.000026489864,"threshold_uncertainty_score":0.77494514},"labels":[],"label_agreement":null},{"id":"W2036041875","doi":"10.1016/j.molcel.2012.03.027","title":"TGF-β-Dependent Active Demethylation and Expression of the p15ink4b Tumor Suppressor Are Impaired by the ZNF217/CoREST Complex","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research; University of British Columbia","keywords":"Biology; Suppressor; Demethylation; Cancer research; Cell biology; Transforming growth factor; Molecular biology; Gene expression; Gene; Biochemistry; DNA methylation","score_opus":0.011525314182568807,"score_gpt":0.23279147923075777,"score_spread":0.22126616504818897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036041875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99200845,0.0042829397,0.0023037398,0.00015434648,0.000107739535,0.00033782265,0.000053270825,0.000005271113,0.00074642565],"genre_scores_gemma":[0.99923766,0.00006626744,0.0002494836,0.00013284844,0.000064031134,0.00002182026,0.00007339719,0.000024231997,0.00013028286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988761,0.00024863347,0.00020106927,0.00022199718,0.00022232911,0.00022988347],"domain_scores_gemma":[0.99915475,0.000027184271,0.0002324235,0.00043388226,0.00007638928,0.00007537701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023733455,0.00015516326,0.0001265893,0.000018161209,0.00013715461,0.000018890007,0.0002027852,0.0001064793,0.0000138020405],"category_scores_gemma":[0.00007044296,0.00010017954,0.00008809376,0.000066186716,0.00010367791,0.0000064393294,0.00020420252,0.00010207085,0.0000018675288],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036546502,0.0000722545,0.008456243,0.000018288274,0.000012890731,3.8094961e-7,0.00011544859,0.00007529082,0.9904521,0.0000152691,0.00034761548,0.0003976703],"study_design_scores_gemma":[0.00035970437,0.00006100448,0.039656173,0.0000098926685,0.000031979955,0.0000015675884,0.00011519573,0.00006973761,0.95402646,0.00007290515,0.005473102,0.00012225047],"about_ca_topic_score_codex":0.000029481083,"about_ca_topic_score_gemma":0.000008705163,"teacher_disagreement_score":0.036425617,"about_ca_system_score_codex":0.000011230721,"about_ca_system_score_gemma":0.000020020372,"threshold_uncertainty_score":0.4085203},"labels":[],"label_agreement":null},{"id":"W2036223112","doi":"10.1016/s1097-2765(02)00637-8","title":"The Crystal Structure of the β-Catenin/ICAT Complex Reveals the Inhibitory Mechanism of ICAT","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":121,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Canadian Institute for Theoretical Astrophysics; Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Cancer Institute; University of Washington","keywords":"Biology; Catenin; Beta-catenin; Cell biology; Wnt signaling pathway; Transcription factor; Transcription (linguistics); Cell adhesion; Cadherin; Molecular biology; Cell; Genetics; Signal transduction; Gene","score_opus":0.007037272864019891,"score_gpt":0.19491667482285446,"score_spread":0.18787940195883457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036223112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926376,0.0035085536,0.00083844736,0.00082141976,0.00021756689,0.00042069794,0.000039106573,0.0000064160317,0.0015102373],"genre_scores_gemma":[0.99869365,0.00012152507,0.00012732083,0.00014899814,0.00008388285,0.000006802819,0.000023085107,0.000026011829,0.00076875626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886066,0.00016586615,0.00028615515,0.00023222763,0.00026097495,0.00019410139],"domain_scores_gemma":[0.9987668,0.000018170444,0.00026633986,0.0008112462,0.00010441608,0.00003306508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011655784,0.00015097937,0.00013328067,0.000017028698,0.0001495823,0.00001311957,0.0004835971,0.00016431624,0.00004183187],"category_scores_gemma":[0.000030013685,0.00008475731,0.00019152327,0.00014596806,0.00025040912,0.000001955547,0.00019343199,0.00013223766,0.00000258182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015564898,0.000018915483,0.00003278845,0.000016326307,0.00004062259,3.4724874e-7,0.00007108527,0.0004650616,0.9956089,0.0004873815,0.0028618611,0.0003811274],"study_design_scores_gemma":[0.00027590984,0.00006842774,0.00034383868,0.000010442097,0.000045235727,0.0000080260115,0.000044002285,0.0003263925,0.9829799,0.0007989861,0.014997439,0.00010140049],"about_ca_topic_score_codex":0.000012029335,"about_ca_topic_score_gemma":0.00001750146,"teacher_disagreement_score":0.012629019,"about_ca_system_score_codex":0.000017592187,"about_ca_system_score_gemma":0.00002868078,"threshold_uncertainty_score":0.3456303},"labels":[],"label_agreement":null},{"id":"W2036678630","doi":"10.1016/j.molcel.2014.01.020","title":"GdX/UBL4A Specifically Stabilizes the TC45/STAT3 Association and Promotes Dephosphorylation of STAT3 to Repress Tumorigenesis","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dephosphorylation; Biology; Carcinogenesis; Phosphorylation; STAT3; Phosphatase; Cancer research; Cell biology; Biochemistry; Gene","score_opus":0.004211128796128276,"score_gpt":0.20516826655249062,"score_spread":0.20095713775636234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036678630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97178346,0.0034558394,0.02295154,0.00038638592,0.000078935605,0.00060785393,0.000057226418,0.000017055261,0.00066170236],"genre_scores_gemma":[0.9951286,0.0001024378,0.004061429,0.00023777434,0.000055314853,0.000052260842,0.00009229776,0.000031742722,0.00023818962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859905,0.00017812004,0.0002832016,0.00042207562,0.00027016454,0.00024738302],"domain_scores_gemma":[0.998926,0.000056351404,0.00019724468,0.0005567058,0.00017659109,0.00008711174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053101685,0.00016977986,0.00017486923,0.000030798084,0.00007522431,0.00004378195,0.00021713683,0.000102063765,0.000014562427],"category_scores_gemma":[0.0005792382,0.00014298855,0.00006968932,0.00011965283,0.000052666946,0.0000058627083,0.00017305752,0.000070001195,0.000007232638],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000798725,0.000062740226,0.0045932033,0.00004116822,0.000028660388,0.0000017412788,0.000071646966,0.00017085757,0.9906096,0.0005607631,0.0006645943,0.0031151741],"study_design_scores_gemma":[0.00031360815,0.00028879024,0.0068670795,0.000010739749,0.000030931384,0.0000011564657,0.000027498476,0.00006346085,0.9743786,0.0003516681,0.01749581,0.0001706466],"about_ca_topic_score_codex":0.00007819751,"about_ca_topic_score_gemma":0.000026727375,"teacher_disagreement_score":0.023345092,"about_ca_system_score_codex":0.00002683178,"about_ca_system_score_gemma":0.000041459367,"threshold_uncertainty_score":0.58309036},"labels":[],"label_agreement":null},{"id":"W2038978453","doi":"10.1016/j.molcel.2013.04.028","title":"Dynamic Methylation of Numb by Set8 Regulates Its Binding to p53 and Apoptosis","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"NUMB; Biology; Cancer research; Cell biology; Apoptosis; Methylation; Genetics; Gene","score_opus":0.0030331690654514672,"score_gpt":0.21094207518831679,"score_spread":0.2079089061228653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038978453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992705,0.0016303578,0.00450532,0.00022847892,0.00006662384,0.00036077725,0.000018076864,0.000011149464,0.00047423344],"genre_scores_gemma":[0.99702996,0.00009722346,0.0015114605,0.000065590815,0.000014233257,0.000020379293,0.00021077752,0.000031016083,0.0010193404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999122,0.00004632084,0.00019976146,0.00032083818,0.00012881475,0.00018222655],"domain_scores_gemma":[0.99946856,0.0000063840266,0.000096299176,0.0002466856,0.00009487941,0.00008716691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008418519,0.00014129932,0.00013189737,0.000071894065,0.000037956863,0.000022284332,0.00009079868,0.00016711719,0.00003344552],"category_scores_gemma":[0.00002375836,0.000154325,0.00005710913,0.00015336357,0.000026815134,0.0000067341784,0.000079660924,0.00004825536,0.000026366964],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001133709,0.000017330816,0.000099462704,0.000028376697,0.000027394546,1.2723977e-7,0.00003519354,0.00079536595,0.9945827,0.000005779648,0.0011016056,0.0032953133],"study_design_scores_gemma":[0.00027542328,0.00012141803,0.00039933267,0.000014289627,0.000025678159,0.0000013529749,0.00002412991,0.0014673552,0.9950624,0.000041172058,0.002396828,0.00017063183],"about_ca_topic_score_codex":0.000038465012,"about_ca_topic_score_gemma":0.000004389822,"teacher_disagreement_score":0.0043249964,"about_ca_system_score_codex":0.000024669533,"about_ca_system_score_gemma":0.000019474359,"threshold_uncertainty_score":0.6293191},"labels":[],"label_agreement":null},{"id":"W2039278840","doi":"10.1016/j.molcel.2011.07.003","title":"Gimme Phospho-Serine Five! Capping Enzyme Guanylyltransferase Recognition of the RNA Polymerase II CTD","year":2011,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; CTD; Enzyme; RNA polymerase II; Polymerase; Molecular biology; RNA polymerase; Serine; RNA; Gene; Cell biology; Biochemistry; Gene expression; Promoter","score_opus":0.012378965129414563,"score_gpt":0.214671006907312,"score_spread":0.20229204177789745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039278840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95459265,0.0057878387,0.0017463475,0.026922211,0.00047987775,0.0010233539,0.00039880082,0.000029349467,0.009019578],"genre_scores_gemma":[0.733603,0.0012606751,0.0006864751,0.21864632,0.0016241085,0.00017239564,0.0029698485,0.00034875935,0.04068845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975745,0.00022127267,0.00044008848,0.0006758191,0.00043445826,0.00065387745],"domain_scores_gemma":[0.9984412,0.000013885256,0.00020362841,0.0010549334,0.00017141322,0.00011493887],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019354437,0.00044709016,0.00037726684,0.00010248409,0.00017769856,0.000026808351,0.00072412106,0.0007649779,0.00023720853],"category_scores_gemma":[0.000058346726,0.00037636736,0.000507872,0.00017546148,0.00017159026,0.000005086161,0.000328727,0.0009652713,0.000032955577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006933533,0.00006321975,0.000009013136,0.0001908047,0.000103123224,0.00018113379,0.00004249511,0.00000546656,0.8800659,0.000001617835,0.11805154,0.0012163138],"study_design_scores_gemma":[0.0005949394,0.0002612034,0.000011235208,0.00009961667,0.00007211634,0.000019004376,0.000013445637,0.000015261488,0.84836775,0.000032766642,0.15013614,0.00037650223],"about_ca_topic_score_codex":0.0006883134,"about_ca_topic_score_gemma":0.00002274163,"teacher_disagreement_score":0.22098967,"about_ca_system_score_codex":0.000028211818,"about_ca_system_score_gemma":0.00020772689,"threshold_uncertainty_score":0.9998688},"labels":[],"label_agreement":null},{"id":"W2039491462","doi":"10.1016/s1097-2765(01)00378-1","title":"Mutation of the c-Cbl TKB Domain Binding Site on the Met Receptor Tyrosine Kinase Converts It into a Transforming Protein","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":451,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Cancer Institute","keywords":"Biology; Tyrosine; Receptor tyrosine kinase; ROR1; Tyrosine kinase; Ubiquitin; Receptor Protein-Tyrosine Kinases; Biochemistry; SH2 domain; Cell biology; GRB2; Signal transduction; Receptor; Molecular biology; Platelet-derived growth factor receptor; Gene","score_opus":0.008909633801890544,"score_gpt":0.217464812901078,"score_spread":0.20855517909918744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039491462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990811,0.00032369085,0.0033570805,0.001073741,0.00007004401,0.00083969516,0.000024407835,0.000009255671,0.0034910736],"genre_scores_gemma":[0.9974609,0.000030181827,0.00090126315,0.0006799667,0.000047644127,0.000093741124,0.00008048377,0.000029564602,0.0006762719],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886376,0.00020530894,0.00022164496,0.0002707257,0.00021521235,0.00022337417],"domain_scores_gemma":[0.9993529,0.000014846436,0.00011995598,0.0004058878,0.00005650781,0.00004995613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034945126,0.00017412067,0.0001252816,0.000036388446,0.0001459171,0.000022676682,0.00024428993,0.00012502805,0.00008297678],"category_scores_gemma":[0.000054006545,0.000115005474,0.00015747623,0.000187837,0.0000879342,0.000004010991,0.000060225284,0.00013250204,0.00003420431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009532275,0.00005892355,0.00006272214,0.000039770803,0.000019565314,0.000011154174,0.00039221856,0.00002572917,0.9975655,0.00025429096,0.00021641603,0.0012583705],"study_design_scores_gemma":[0.0004916059,0.00027911886,0.000011518253,0.00006705369,0.000015667838,0.0000058473784,0.000160889,0.000028571043,0.96050745,0.0001844711,0.038101822,0.0001459957],"about_ca_topic_score_codex":0.00003424945,"about_ca_topic_score_gemma":0.000017625094,"teacher_disagreement_score":0.037885405,"about_ca_system_score_codex":0.000020081292,"about_ca_system_score_gemma":0.000051551433,"threshold_uncertainty_score":0.46897873},"labels":[],"label_agreement":null},{"id":"W2040833814","doi":"10.1016/j.molcel.2006.06.003","title":"p97: The Cell's Molecular Purgatory?","year":2006,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":142,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Purgatory; Computational biology; Cell biology; Genetics; Theology","score_opus":0.014256014253066137,"score_gpt":0.2562663634195315,"score_spread":0.24201034916646538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040833814","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016036778,0.94274706,0.001551061,0.000029356746,0.00028724477,0.0013024143,0.00011348648,0.000043902688,0.05376511],"genre_scores_gemma":[0.00075486815,0.9903966,0.00047414936,0.00055763416,0.0004060781,0.00041029337,0.0013197961,0.00029598677,0.0053846],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99644154,0.0005902829,0.0006838182,0.0010828832,0.0004383098,0.0007631528],"domain_scores_gemma":[0.9973996,0.00002789852,0.00045041318,0.0018345456,0.00009349914,0.00019401213],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040491254,0.00091812655,0.0010145595,0.00011139937,0.00018391527,0.00013068428,0.001285152,0.00091986987,0.00007715758],"category_scores_gemma":[0.00003364068,0.00069050636,0.0013786863,0.00030408453,0.00017543236,0.0000027872616,0.0005113942,0.0006439279,0.0003953162],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033619603,0.0007497734,0.000004944542,0.024222558,0.0006855763,0.0014241409,0.00005130531,0.00008899839,0.16681746,0.0008432916,0.05952518,0.74555314],"study_design_scores_gemma":[0.0002218627,0.00011177729,1.16752304e-7,0.00033261048,0.0004406907,0.000037625738,0.0000051251127,0.0000017244025,0.13461825,0.000057090227,0.8634588,0.0007142951],"about_ca_topic_score_codex":0.000024170593,"about_ca_topic_score_gemma":0.0000031631862,"teacher_disagreement_score":0.8039337,"about_ca_system_score_codex":0.000046405632,"about_ca_system_score_gemma":0.00044955066,"threshold_uncertainty_score":0.99955463},"labels":[],"label_agreement":null},{"id":"W2040871017","doi":"10.1016/j.molcel.2006.07.035","title":"DNA Degradation at Unprotected Telomeres in Yeast Is Regulated by the CDK1 (Cdc28/Clb) Cell-Cycle Kinase","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":125,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Cancer Institute","keywords":"Genome instability; Telomere; Biology; Cyclin-dependent kinase 1; Cell biology; Cell cycle; DNA re-replication; Saccharomyces cerevisiae; DNA repair; DNA damage; DNA; Genetics; Cell; Eukaryotic DNA replication; Yeast","score_opus":0.005081358839324048,"score_gpt":0.20103770061177162,"score_spread":0.19595634177244758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040871017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98887503,0.0020243076,0.00028241592,0.0011646505,0.000088850844,0.00077959104,0.00003539101,0.00011592416,0.006633845],"genre_scores_gemma":[0.9879824,0.000050026567,0.00030055616,0.0008390318,0.000055241548,0.000039858718,0.00030374023,0.00006544553,0.01036372],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978635,0.00014647383,0.00044267662,0.00053506374,0.00050148176,0.00051085843],"domain_scores_gemma":[0.99888515,0.000033645454,0.00015071571,0.0007035243,0.00009271409,0.00013424453],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017263294,0.00031390073,0.00032260318,0.00016965621,0.00015179685,0.00004097208,0.00021915702,0.00019609422,0.00031967805],"category_scores_gemma":[0.000031759966,0.00025150887,0.00013392116,0.00074287655,0.00013356152,0.00006641645,0.000080296806,0.00030466894,0.0001914379],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014137666,0.0003414353,0.0022498246,0.00008728324,0.000013321523,0.00025561763,0.00021057505,0.000052566967,0.9821684,0.000016808055,0.011887972,0.0025748168],"study_design_scores_gemma":[0.0020759453,0.00010391182,0.0139043685,0.00006234772,0.000063824744,0.000026133801,0.0001180109,0.000842159,0.9609545,0.000089319925,0.021448044,0.00031144233],"about_ca_topic_score_codex":0.0019744737,"about_ca_topic_score_gemma":0.00019655065,"teacher_disagreement_score":0.02121391,"about_ca_system_score_codex":0.00017764073,"about_ca_system_score_gemma":0.00007416913,"threshold_uncertainty_score":0.99999374},"labels":[],"label_agreement":null},{"id":"W2041437448","doi":"10.1016/j.molcel.2007.12.002","title":"Interplay of Chromatin Modifiers on a Short Basic Patch of Histone H4 Tail Defines the Boundary of Telomeric Heterochromatin","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":199,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; Health Canada; National Institutes of Health","keywords":"Biology; Heterochromatin protein 1; Histone methyltransferase; Histone H3; Histone code; Histone methylation; EZH2; Histone H1; Histone H2A; Histone H4; Genetics; Heterochromatin; Chromatin; Cell biology; Molecular biology; DNA methylation; Nucleosome; DNA; Gene expression","score_opus":0.0047543935359010536,"score_gpt":0.24605066575445517,"score_spread":0.24129627221855413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041437448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868682,0.00096415123,0.008438093,0.000025741161,0.000094052826,0.00022807668,0.000039156206,0.00000536431,0.0033371793],"genre_scores_gemma":[0.9974103,0.000054996217,0.0021745996,0.0001060658,0.00002050068,0.000008411562,0.00008452493,0.000037897204,0.00010271783],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985785,0.000060122075,0.0005925881,0.0002768354,0.00024207514,0.00024989664],"domain_scores_gemma":[0.9988472,0.000027941986,0.00031266324,0.00064879213,0.00010732685,0.000056084915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033800365,0.00021647774,0.00031954658,0.00008184754,0.00004228321,0.0000071776526,0.0003873302,0.0001453335,0.00001605169],"category_scores_gemma":[0.000037213907,0.00017968466,0.00022811565,0.00015480544,0.00026856753,0.000002236227,0.0001418331,0.00010369916,0.0000022651316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008807648,0.00018973325,0.00067318324,0.00016641436,0.00006717378,0.0000069279263,0.00019193368,0.00044917915,0.99601334,0.000056736102,0.00017577726,0.0019215161],"study_design_scores_gemma":[0.00036865936,0.0006178857,0.0015015237,0.000044712997,0.0000411452,0.000009333703,0.00019711185,0.0006611326,0.9956258,0.00007586578,0.00068195787,0.000174887],"about_ca_topic_score_codex":0.00008233033,"about_ca_topic_score_gemma":0.00003622351,"teacher_disagreement_score":0.0105421,"about_ca_system_score_codex":0.000026566771,"about_ca_system_score_gemma":0.000078141806,"threshold_uncertainty_score":0.7327328},"labels":[],"label_agreement":null},{"id":"W2043624735","doi":"10.1016/j.molcel.2014.06.018","title":"A Methylation-Phosphorylation Switch Determines Sox2 Stability and Function in ESC Maintenance or Differentiation","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":199,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Science and Technology Commission of Shanghai Municipality; East China Normal University; Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China; Wellcome Trust","keywords":"Biology; SOX2; Phosphorylation; Ubiquitin ligase; Cell biology; Downregulation and upregulation; Embryonic stem cell; Ubiquitin; Genetics; Gene","score_opus":0.010537376130021552,"score_gpt":0.23524926288713124,"score_spread":0.22471188675710968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043624735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9079314,0.00024823635,0.0906195,0.00006957349,0.000063954416,0.00028094844,0.0000029775863,0.000010375797,0.0007730495],"genre_scores_gemma":[0.9988371,0.00006855827,0.00041771226,0.000078807534,0.00003339934,0.000036912203,0.000098124656,0.000020764064,0.00040857925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987446,0.00018442923,0.00022166035,0.0004268368,0.0001852168,0.00023727914],"domain_scores_gemma":[0.9994427,0.000026083739,0.000075468255,0.00030272128,0.000086437365,0.00006660323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003823183,0.00014413563,0.00013144933,0.00006881525,0.000051089504,0.000034393102,0.00009253426,0.00013525717,0.000031334956],"category_scores_gemma":[0.00014450942,0.0001279696,0.000045118373,0.0001305317,0.00004002904,0.000008850614,0.0000893776,0.00009309629,0.000008210135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021646799,0.00005839543,0.01240229,0.00006102562,0.000007685866,0.000002507795,0.00003018834,0.00009183536,0.9804215,0.00002432029,0.000031747993,0.0066520423],"study_design_scores_gemma":[0.0010729017,0.0002831024,0.03651898,0.000013972502,0.0000147406245,0.000002449062,0.00003086263,0.012558801,0.9465005,0.00032833387,0.002470111,0.00020525667],"about_ca_topic_score_codex":0.00004192673,"about_ca_topic_score_gemma":0.00016934543,"teacher_disagreement_score":0.090905756,"about_ca_system_score_codex":0.000027973634,"about_ca_system_score_gemma":0.000034394907,"threshold_uncertainty_score":0.52184486},"labels":[],"label_agreement":null},{"id":"W2044583310","doi":"10.1016/j.molcel.2009.11.013","title":"The ELAV Protein HuD Stimulates Cap-Dependent Translation in a Poly(A)- and eIF4A-Dependent Manner","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Total Foundation; Deutsche Forschungsgemeinschaft","keywords":"Translation (biology); Biology; Neurite; Cell biology; Messenger RNA; eIF4A; RNA-binding protein; Enhancer; Eukaryotic translation; EIF4G; Translational regulation; Genetics; Gene expression; In vitro; Gene","score_opus":0.006704081741449582,"score_gpt":0.24093077877141755,"score_spread":0.23422669702996798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044583310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98633504,0.00925141,0.0017169892,0.0007275165,0.000019509132,0.0004630589,0.0000032337698,0.000008789078,0.001474427],"genre_scores_gemma":[0.9967438,0.00020762318,0.00030434236,0.00016921436,0.00003257391,0.00002472647,0.000019401721,0.000016363596,0.002481927],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877614,0.000104426756,0.00018912222,0.00033030155,0.00023294115,0.00036708984],"domain_scores_gemma":[0.9995315,0.000010479624,0.000038973125,0.0002879268,0.00003248706,0.00009864367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029389362,0.0001494455,0.00010493371,0.0000490022,0.00011023367,0.00007614262,0.00017577276,0.00011485334,0.00000542227],"category_scores_gemma":[0.000028697901,0.00011716292,0.00005475682,0.00007272256,0.000043098276,0.000005275295,0.000044449735,0.00015754602,0.0000066043026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100039775,0.00004993574,0.00020592584,0.000008720665,0.000009209136,0.00006473793,0.0000447084,0.00018669236,0.98156893,0.000054153825,0.000027280234,0.017679637],"study_design_scores_gemma":[0.0011798582,0.00039804366,0.0012256543,0.000016989929,0.000008033798,0.000012220958,0.0000799513,0.001304,0.9930972,0.00034643055,0.0021168168,0.00021479667],"about_ca_topic_score_codex":0.00011666983,"about_ca_topic_score_gemma":0.00016029127,"teacher_disagreement_score":0.01746484,"about_ca_system_score_codex":0.0000145181575,"about_ca_system_score_gemma":0.000039443217,"threshold_uncertainty_score":0.47777653},"labels":[],"label_agreement":null},{"id":"W2045214060","doi":"10.1016/j.molcel.2014.11.025","title":"Adaptive Regulation of Testis Gene Expression and Control of Male Fertility by the Drosophila Hairpin RNA Pathway","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; Hospital for Sick Children","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; RNA interference; Piwi-interacting RNA; Genetics; Small hairpin RNA; Gene; Gene silencing; Drosophila melanogaster; RNA-induced silencing complex; Cell biology; RNA; Computational biology","score_opus":0.005808673730189869,"score_gpt":0.1910167201751127,"score_spread":0.18520804644492284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045214060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95352584,0.0014676454,0.043682333,0.000044923185,0.000026137213,0.00014472575,0.000030692765,0.0000026362086,0.0010750804],"genre_scores_gemma":[0.99922633,0.000026671152,0.0003570711,0.00009479339,0.00001782975,0.000009043317,0.000040590276,0.000009868475,0.00021780694],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992617,0.00011902638,0.00018660692,0.0002183482,0.000107727225,0.00010659284],"domain_scores_gemma":[0.9993949,0.000014823193,0.00013246405,0.00032774132,0.00009477363,0.000035328427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015464136,0.00010508935,0.00014148036,0.000015273032,0.00003278078,0.000005898659,0.0001261853,0.00009849488,0.000008676444],"category_scores_gemma":[0.0000392287,0.00008038219,0.00006440751,0.000032660795,0.00011103865,0.0000030972951,0.000059733666,0.00004622351,0.00000124334],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012999223,0.00004112887,0.00096185016,0.000014703156,0.000013161806,4.820433e-7,0.000023671502,0.00009715159,0.99725366,0.000010955466,0.00022453451,0.0012287304],"study_design_scores_gemma":[0.0005204494,0.000380998,0.003238101,0.00001528365,0.000016636786,0.000002037959,0.000015184565,0.000991865,0.99425185,0.0001549757,0.0003302002,0.00008244883],"about_ca_topic_score_codex":0.000027089842,"about_ca_topic_score_gemma":0.0000024991873,"teacher_disagreement_score":0.045700498,"about_ca_system_score_codex":0.0000033444514,"about_ca_system_score_gemma":0.000017136152,"threshold_uncertainty_score":0.32778907},"labels":[],"label_agreement":null},{"id":"W2045273788","doi":"10.1016/j.molcel.2012.05.046","title":"Snail Regulates MyoD Binding-Site Occupancy to Direct Enhancer Switching and Differentiation-Specific Transcription in Myogenesis","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":204,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Canadian Institutes of Health Research","keywords":"MyoD; Myogenesis; PITX2; Biology; MyoD Protein; Enhancer; Transcription factor; Myogenic regulatory factors; Cellular differentiation; Myogenin; Mef2; Snail; SNAI1; Cell biology; Myocyte; Molecular biology; Genetics; Homeobox; Gene; Transition (genetics)","score_opus":0.006546615242527288,"score_gpt":0.21516449015579994,"score_spread":0.20861787491327266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045273788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990468,0.005664483,0.002542045,0.000055348442,0.00014678277,0.00018808908,0.000008652294,0.000012342396,0.00091422023],"genre_scores_gemma":[0.9986006,0.00053295976,0.00028751424,0.00018678095,0.00006470812,0.000037067497,0.00012423795,0.000024321487,0.00014179345],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990052,0.00008351386,0.00016898927,0.0003385706,0.00008050907,0.00032324175],"domain_scores_gemma":[0.9995953,0.000007475512,0.00004349759,0.00023028624,0.000019476985,0.00010400183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011742464,0.0001716423,0.00014949021,0.00007508675,0.00006848176,0.000018032933,0.00008314581,0.00014192668,0.00003336004],"category_scores_gemma":[0.000010333823,0.000176001,0.00006976956,0.00011960178,0.000021420117,0.000009746404,0.000047694633,0.00006765019,0.00002734015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009713182,0.00009088261,0.015739769,0.00002296899,0.000014856803,9.712743e-7,0.00024470472,0.00004200874,0.98124,0.000019167313,0.00018486737,0.0023027016],"study_design_scores_gemma":[0.00046240664,0.00007840144,0.08691887,0.000014233633,0.000014711217,7.139981e-7,0.000042142125,0.000016048145,0.90807325,0.000027534245,0.0041162213,0.0002354594],"about_ca_topic_score_codex":0.00001864257,"about_ca_topic_score_gemma":0.0000233375,"teacher_disagreement_score":0.07316671,"about_ca_system_score_codex":0.0000124196795,"about_ca_system_score_gemma":0.000009862451,"threshold_uncertainty_score":0.71771127},"labels":[],"label_agreement":null},{"id":"W2045440227","doi":"10.1016/j.molcel.2007.11.018","title":"New Modes of Translational Control in Development, Behavior, and Disease","year":2007,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Nuclear Receptors and Signaling","field":"Neuroscience","cited_by":213,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Biology; Disease; Posttranslational modification; Computational biology; Internal medicine; Biochemistry","score_opus":0.049384339506603536,"score_gpt":0.30701701445223084,"score_spread":0.2576326749456273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045440227","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00062945543,0.9926957,0.005269959,0.0000041351395,0.000035372766,0.00045958132,0.000017072685,0.000010076477,0.00087867596],"genre_scores_gemma":[0.025067592,0.97262913,0.0017427766,0.00012172224,0.000022685706,0.000021542111,0.000019115005,0.00007009488,0.0003053526],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988928,0.000082491526,0.00035299218,0.0002969329,0.00021227474,0.00016250041],"domain_scores_gemma":[0.99954385,0.00006392426,0.00010826732,0.000107679356,0.000007959377,0.00016835259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010144009,0.00017981956,0.0004530489,0.00015858753,0.000024491217,0.000017775481,0.00013315327,0.00009113065,0.00007787371],"category_scores_gemma":[0.000022803875,0.00016532782,0.00012563141,0.0001521912,0.000031508847,0.000028772438,0.000019525167,0.00015064434,0.000009845321],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012333436,0.00008169676,0.000044769626,0.002076554,0.0000042919696,0.00015107439,0.000049947776,0.000012331856,0.008551865,0.00042055297,0.000016008857,0.98857856],"study_design_scores_gemma":[0.00064965646,0.000015323938,0.000017342341,0.0015478184,0.00018897447,0.0000043469963,0.0000016931291,0.00005391779,0.0049499525,0.00009190231,0.9921161,0.00036299572],"about_ca_topic_score_codex":0.000005333492,"about_ca_topic_score_gemma":9.3750754e-7,"teacher_disagreement_score":0.99210006,"about_ca_system_score_codex":0.000015855056,"about_ca_system_score_gemma":0.00028001337,"threshold_uncertainty_score":0.67418724},"labels":[],"label_agreement":null},{"id":"W2045665004","doi":"10.1016/j.molcel.2007.12.031","title":"The Glc7 Phosphatase Subunit of the Cleavage and Polyadenylation Factor Is Essential for Transcription Termination on snoRNA Genes","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":137,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto","funders":"National Cancer Institute; Canadian Institutes of Health Research; American Heart Association","keywords":"Biology; Protein subunit; Polyadenylation; Small nucleolar RNA; Protein phosphatase 1; Phosphatase; Protein phosphatase 2; Cell biology; Phosphorylation; Molecular biology; Biochemistry; Gene; Downregulation and upregulation; RNA; Long non-coding RNA","score_opus":0.010135629464342556,"score_gpt":0.22777771542122915,"score_spread":0.2176420859568866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045665004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906779,0.0028070558,0.0055022445,0.00031776432,0.000108018554,0.0003026806,0.00009055392,0.0000030738618,0.00019071462],"genre_scores_gemma":[0.99834275,0.0007128591,0.00007868928,0.00014690786,0.000046713816,0.000030467161,0.00006674073,0.000011976492,0.0005628886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994872,0.00003439209,0.00012221622,0.00016015302,0.00010183165,0.000094178926],"domain_scores_gemma":[0.99958724,0.000007356702,0.00007874443,0.00025050848,0.000054248543,0.000021902351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000050276132,0.00008023528,0.000052309962,0.000013268399,0.00021602998,0.000014635598,0.00010786774,0.000066532615,0.000003951984],"category_scores_gemma":[0.0000093376975,0.00005525027,0.000076043,0.000046413246,0.00008108965,0.0000037992504,0.000014773059,0.00003444552,8.1495284e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060317896,0.000031429703,0.00014349628,0.000013249435,0.000010711187,2.9397458e-7,0.000081128805,0.000024732246,0.9911313,0.0001239096,0.0004961267,0.007883303],"study_design_scores_gemma":[0.00035788806,0.000092423616,0.0036843861,0.0000035290045,0.000019452196,0.0000018527156,0.000024425775,0.00020623056,0.9729249,0.000034524903,0.022583444,0.00006696111],"about_ca_topic_score_codex":0.000014498902,"about_ca_topic_score_gemma":0.000006150232,"teacher_disagreement_score":0.022087317,"about_ca_system_score_codex":0.0000071592276,"about_ca_system_score_gemma":0.000028628521,"threshold_uncertainty_score":0.22530407},"labels":[],"label_agreement":null},{"id":"W2045755743","doi":"10.1016/j.molcel.2011.11.024","title":"A Universal RNA Polymerase II CTD Cycle Is Orchestrated by Complex Interplays between Kinase, Phosphatase, and Isomerase Enzymes along Genes","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":224,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"CTD; RNA polymerase II; Biology; Transcription (linguistics); Gene; Cell biology; Chromatin; Molecular biology; Genetics; Gene expression; Promoter","score_opus":0.010710133344228812,"score_gpt":0.24958565596056248,"score_spread":0.23887552261633366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045755743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9738753,0.02328211,0.0013395641,0.00020204757,0.000033634995,0.0001986806,0.000328337,0.000019433372,0.0007209197],"genre_scores_gemma":[0.99651426,0.0003740495,0.00042883164,0.0005596086,0.00010068253,0.0000100664,0.0009560188,0.000044665943,0.0010118048],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839604,0.000108107444,0.00021845815,0.0004171499,0.00020610735,0.0006541409],"domain_scores_gemma":[0.9990167,0.000016488751,0.00007437119,0.00037641884,0.000050740382,0.0004653006],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016065512,0.00027288555,0.00022064586,0.00006891112,0.00020260699,0.000051898533,0.00023980954,0.0001672269,0.000112987975],"category_scores_gemma":[0.000019774488,0.00027809685,0.000094892435,0.00014450485,0.00014359888,0.000018769224,0.00030983484,0.00015822753,0.000021907199],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006642613,0.00011953898,0.0062262397,0.000027520027,0.000082455554,0.000038399674,0.00007678097,0.0000031163554,0.9806853,0.000028623681,0.008448407,0.0041972217],"study_design_scores_gemma":[0.0009300034,0.0002769769,0.0007377221,0.000011945145,0.00003947378,0.000007885143,0.00012360622,0.00013237314,0.9737008,0.000006222036,0.023713026,0.0003199582],"about_ca_topic_score_codex":0.00053917756,"about_ca_topic_score_gemma":0.000010517226,"teacher_disagreement_score":0.022908062,"about_ca_system_score_codex":0.000021438353,"about_ca_system_score_gemma":0.000060107395,"threshold_uncertainty_score":0.9999671},"labels":[],"label_agreement":null},{"id":"W2047001514","doi":"10.1016/j.molcel.2007.04.011","title":"NELF Interacts with CBC and Participates in 3′ End Processing of Replication-Dependent Histone mRNAs","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":233,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; New Energy and Industrial Technology Development Organization; Ministry of Education, Culture, Sports, Science and Technology; Naito Foundation","keywords":"Biology; Histone; Polyadenylation; Transcription factor; Cell biology; Molecular biology; Genetics; Messenger RNA; Gene","score_opus":0.009666405920491873,"score_gpt":0.2919798697865513,"score_spread":0.28231346386605943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047001514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99280536,0.0012966754,0.0042714113,0.000066872366,0.000007131345,0.00012871047,0.0000011199829,0.0000037358484,0.0014190068],"genre_scores_gemma":[0.9985893,0.0000419333,0.00086089893,0.000078456585,0.00001217564,0.0000095275545,0.000016896838,0.000014806148,0.00037602126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914634,0.00002488144,0.00018007262,0.000284965,0.00013491776,0.00022882516],"domain_scores_gemma":[0.9994976,0.0000085645715,0.00007133475,0.00027701195,0.000062524894,0.00008294452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027345726,0.00008810459,0.000101878,0.000060474784,0.000024067558,0.000013672539,0.000090326015,0.000054635384,0.00000501606],"category_scores_gemma":[0.000047964877,0.00007793406,0.000018953517,0.00008674392,0.00006663053,0.000004342289,0.000058670816,0.000078154146,0.0000010768655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012312176,0.00006533225,0.009233947,0.00004743399,0.0000070793835,0.000039504426,0.000095333286,0.0000444334,0.9839884,0.000011889876,0.000011069047,0.0063324603],"study_design_scores_gemma":[0.000464289,0.00020791966,0.005024158,0.000029675572,0.0000060684415,0.000009685969,0.00020308276,0.00014314437,0.9934274,0.000014667347,0.0003770726,0.000092861024],"about_ca_topic_score_codex":0.00013526698,"about_ca_topic_score_gemma":0.000206684,"teacher_disagreement_score":0.00943898,"about_ca_system_score_codex":0.000014649783,"about_ca_system_score_gemma":0.00004762128,"threshold_uncertainty_score":0.3178059},"labels":[],"label_agreement":null},{"id":"W2047026349","doi":"10.1016/j.molcel.2010.01.031","title":"PP2AT61ɛ Is an Inhibitor of MAP4K3 in Nutrient Signaling to mTOR","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":125,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Medical Research Council; Imperial College London; Fonds Wetenschappelijk Onderzoek; Cancer Research UK","keywords":"mTORC1; Biology; Dephosphorylation; Amino acid; PI3K/AKT/mTOR pathway; Biochemistry; Phosphorylation; Protein phosphatase 2; Kinase; Signal transduction; Cell biology; Phosphatase","score_opus":0.00698185014614227,"score_gpt":0.2428548096618767,"score_spread":0.23587295951573442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047026349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951441,0.00032727225,0.0028133013,0.00010851485,0.00037664393,0.00026995578,0.000028991451,0.000011682362,0.0009195042],"genre_scores_gemma":[0.9935906,0.000007851449,0.0050031464,0.00087142567,0.00021703426,0.000035121222,0.000038801365,0.000049497237,0.0001865037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985343,0.000055612916,0.0003205439,0.0005153202,0.00024033217,0.00033387713],"domain_scores_gemma":[0.9989617,0.000007879712,0.000095049785,0.000640087,0.00011385917,0.00018142402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024926482,0.00020310764,0.00020601835,0.00010767975,0.000030687002,0.000020710428,0.00034901383,0.00023717321,0.0000982243],"category_scores_gemma":[0.000047428417,0.00022161951,0.00011005426,0.00019298487,0.000055653538,0.0000044903436,0.0001324464,0.00020361463,0.000023608294],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073641575,0.00016274693,0.001240971,0.000031789674,0.000011509232,0.00001887838,0.00017282946,0.00023055084,0.99692893,0.00004426802,0.00064369413,0.0004401828],"study_design_scores_gemma":[0.0005675819,0.00040662457,0.000120129305,0.000021692096,0.000011129849,0.0000025085305,0.000036174817,0.00005491093,0.9733394,0.00008489767,0.025097968,0.0002569807],"about_ca_topic_score_codex":0.000057260233,"about_ca_topic_score_gemma":0.00003616704,"teacher_disagreement_score":0.024454275,"about_ca_system_score_codex":0.000020370418,"about_ca_system_score_gemma":0.000108415545,"threshold_uncertainty_score":0.90373814},"labels":[],"label_agreement":null},{"id":"W2047824377","doi":"10.1016/j.molcel.2004.12.003","title":"Binding of Chromatin-Modifying Activities to Phosphorylated Histone H2A at DNA Damage Sites","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":571,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"National Institute of General Medical Sciences","keywords":"Biology; Chromatin; Histone; Histone H2A; Cell biology; Chromatin remodeling; DNA damage; Phosphorylation; DNA repair; Histone code; Histone H1; Acetylation; DNA; Molecular biology; Genetics; Nucleosome; Gene","score_opus":0.007620137845502015,"score_gpt":0.2365645932240885,"score_spread":0.2289444553785865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047824377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928194,0.00047378617,0.0032920702,0.000044027416,0.00009358828,0.00026467472,0.000022325747,0.000040191404,0.0029498797],"genre_scores_gemma":[0.99292284,0.000015719888,0.0053234086,0.0001853442,0.000025160445,0.000020394144,0.0001275261,0.000059960374,0.0013196234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873155,0.00004165794,0.00024248462,0.00042984186,0.00022045562,0.00033403165],"domain_scores_gemma":[0.9991719,0.0000069580906,0.00012613075,0.00052400125,0.00004654404,0.00012443314],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013101105,0.00022925375,0.00022835782,0.00009436792,0.000084597494,0.00001634804,0.00024348678,0.00016181289,0.00005020689],"category_scores_gemma":[0.000041140942,0.00025393875,0.0001465621,0.00016196966,0.00005714475,0.0000051437287,0.00030341564,0.0000771981,0.000049274055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000395694,0.00008665275,0.000057892394,0.00005893835,0.000037045764,0.000042839012,0.00020427111,0.0007435615,0.99840015,0.000042627875,0.00012899135,0.00015748551],"study_design_scores_gemma":[0.0006655368,0.00032933906,0.00004873205,0.000033697026,0.000027659857,0.000008205734,0.00009269592,0.000027516506,0.99684674,0.000045364926,0.0015971264,0.00027741047],"about_ca_topic_score_codex":0.000033385142,"about_ca_topic_score_gemma":0.00001755965,"teacher_disagreement_score":0.0020313384,"about_ca_system_score_codex":0.000121784615,"about_ca_system_score_gemma":0.000066236724,"threshold_uncertainty_score":0.9999913},"labels":[],"label_agreement":null},{"id":"W2048186818","doi":"10.1016/j.molcel.2011.03.026","title":"The Specificity and Topology of Chromatin Interaction Pathways in Yeast","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":251,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"National Institute of General Medical Sciences","keywords":"Chromatin; Biology; ChIA-PET; Bivalent chromatin; Histone; Genetics; Saccharomyces cerevisiae; Chromatin remodeling; Computational biology; Histone code; Histone-modifying enzymes; Cell biology; Gene; Nucleosome","score_opus":0.009781080140130578,"score_gpt":0.19746629310645392,"score_spread":0.18768521296632334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048186818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891901,0.00037193365,0.0006872712,0.000015034837,0.000071066075,0.00007869255,0.000004603157,0.0000020880257,0.009579198],"genre_scores_gemma":[0.9990378,0.00015206932,0.0006825785,0.00002891407,0.000012866949,0.000004882918,0.000010861963,0.000009408639,0.00006063674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995143,0.000040970102,0.00015324765,0.00014065688,0.00003784275,0.000113022244],"domain_scores_gemma":[0.99968094,0.0000045783595,0.00007141399,0.0001996177,0.00002037847,0.000023071083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101177284,0.000071632625,0.00007453272,0.000019254294,0.000027141186,0.00000623016,0.00010366093,0.00006785179,0.000008831768],"category_scores_gemma":[0.000012522144,0.00006009935,0.00003259852,0.000031479038,0.00007355862,0.0000011531246,0.0000840235,0.000054451655,0.000002398965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002657329,0.00004517794,0.0009927745,0.000011403535,0.0000072841754,0.000005158473,0.00016227397,0.000015361707,0.99668986,0.0007330183,0.000026939546,0.0012841593],"study_design_scores_gemma":[0.00031344956,0.00019091065,0.0084078135,0.0000061309183,0.00000620974,0.000011136725,0.00043038747,0.0005333906,0.9873341,0.000838253,0.0018194059,0.000108849985],"about_ca_topic_score_codex":0.000048282178,"about_ca_topic_score_gemma":0.00009446976,"teacher_disagreement_score":0.009847669,"about_ca_system_score_codex":0.000006694072,"about_ca_system_score_gemma":0.000016006134,"threshold_uncertainty_score":0.24507804},"labels":[],"label_agreement":null},{"id":"W2049278745","doi":"10.1016/j.molcel.2009.12.019","title":"The Nuclear Poly(A)-Binding Protein Interacts with the Exosome to Promote Synthesis of Noncoding Small Nucleolar RNAs","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Cancer Research UK","keywords":"Small nucleolar RNA; Biology; Polyadenylation; Exosome; RNA; Cell biology; Long non-coding RNA; Exosome complex; Poly(A)-binding protein; Messenger RNA; Non-coding RNA; RNA-binding protein; Gene; microRNA; Genetics; Microvesicles","score_opus":0.005688119735267181,"score_gpt":0.2159332100718662,"score_spread":0.21024509033659902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049278745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99550986,0.00010486332,0.0003714472,0.001131058,0.000042352225,0.0005683134,0.000004729421,0.000010912767,0.0022564617],"genre_scores_gemma":[0.9959729,0.00001020099,0.0023397678,0.00014274665,0.000060450333,0.00005142992,0.0000030804483,0.00005452436,0.0013649457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987294,0.00009369289,0.00017975357,0.00031736126,0.0002488262,0.00043095523],"domain_scores_gemma":[0.9989379,0.00003247681,0.00010367509,0.00067746406,0.00010090314,0.00014759584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047177472,0.00017684679,0.00014061386,0.000046406778,0.00027689632,0.000108203676,0.0006486207,0.00009763369,0.000012804259],"category_scores_gemma":[0.00022365131,0.000103288025,0.00010138744,0.00014843665,0.000121964644,0.0000050459294,0.00026887452,0.0003147527,0.000027140699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013470126,0.000035431545,0.00003114887,0.000022504746,0.000040361218,0.000021654158,0.00008322114,0.000006308652,0.9938795,0.00011060047,0.00008399932,0.0055505806],"study_design_scores_gemma":[0.0001778111,0.00028158212,0.00006592056,0.000043670578,0.000013770863,0.0000104480505,0.00016712556,0.000077871155,0.9736739,0.0000053998924,0.025334941,0.00014757017],"about_ca_topic_score_codex":0.000048778504,"about_ca_topic_score_gemma":0.00010136602,"teacher_disagreement_score":0.025250942,"about_ca_system_score_codex":0.000011260274,"about_ca_system_score_gemma":0.000064044056,"threshold_uncertainty_score":0.42119634},"labels":[],"label_agreement":null},{"id":"W2049317229","doi":"10.1016/j.molcel.2009.04.013","title":"Polo Kinase Regulates Mitotic Chromosome Condensation by Hyperactivation of Condensin DNA Supercoiling Activity","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":153,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Condensin; Biology; Premature chromosome condensation; Cell biology; Anaphase; Mitosis; Chromosome segregation; Genetics; Chromosome; Gene","score_opus":0.004976287967753452,"score_gpt":0.21314993821765793,"score_spread":0.20817365024990447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049317229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99602544,0.0006014767,0.0024502955,0.00015614185,0.00006503173,0.00020184375,0.000021511583,0.000014067514,0.0004641917],"genre_scores_gemma":[0.9986289,0.000057542937,0.00042071586,0.00028691892,0.000042669693,0.0000034156435,0.0002468906,0.000022157568,0.0002907531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990094,0.000079056685,0.00020995855,0.00034308687,0.0001422777,0.00021624412],"domain_scores_gemma":[0.99933785,0.000010729646,0.00012159516,0.00035855893,0.00010859305,0.000062665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009661172,0.00018126967,0.00018576304,0.00004976399,0.000051507635,0.000018669762,0.00011982745,0.00021007209,0.000015818085],"category_scores_gemma":[0.00004280954,0.00019872616,0.00011001173,0.000093800016,0.00005338656,0.000010205743,0.00003233032,0.000095213254,0.0000055452438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050750485,0.00016467356,0.00011799904,0.000020544418,0.000020626887,0.000005312422,0.000027930357,0.00014567241,0.99805975,0.000031616044,0.00032838466,0.0010267182],"study_design_scores_gemma":[0.0005445837,0.00026370975,0.00058441487,0.000013839981,0.00003150617,0.0000073837546,0.00002479797,0.00043489924,0.9969203,0.00008110304,0.0008860635,0.0002074162],"about_ca_topic_score_codex":0.000026951398,"about_ca_topic_score_gemma":0.00000447585,"teacher_disagreement_score":0.002603496,"about_ca_system_score_codex":0.000025146786,"about_ca_system_score_gemma":0.00005232281,"threshold_uncertainty_score":0.81038177},"labels":[],"label_agreement":null},{"id":"W2049376070","doi":"10.1016/j.molcel.2008.10.019","title":"The Rat1p 5′ to 3′ Exonuclease Degrades Telomeric Repeat-Containing RNA and Promotes Telomere Elongation in Saccharomyces cerevisiae","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":301,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Sixth Framework Programme; Seventh Framework Programme; Krebsliga Schweiz; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Telomere; Biology; Saccharomyces cerevisiae; RNA polymerase II; Telomerase; Transcription (linguistics); Exonuclease; Cell biology; RNA; Telomere-binding protein; Genetics; DNA; Molecular biology; Polymerase; Yeast; Transcription factor; Gene; Promoter; DNA-binding protein; Gene expression","score_opus":0.013374712383105643,"score_gpt":0.2347199629284846,"score_spread":0.22134525054537896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049376070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98982096,0.0053304234,0.00016777751,0.0015905183,0.00007684511,0.00085070304,0.0000028095428,0.00008849658,0.0020714824],"genre_scores_gemma":[0.9955765,0.000835395,0.0020907875,0.0007910168,0.00006761903,0.000058544756,0.000011989773,0.00005400738,0.00051416253],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99793243,0.00013850619,0.0004594347,0.00056116964,0.00039162944,0.00051685405],"domain_scores_gemma":[0.99881864,0.00012818044,0.00012404649,0.0005196339,0.0001025362,0.00030696127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031816677,0.00030557218,0.0004136794,0.00023858377,0.00033407673,0.000073594914,0.00018584827,0.000105854946,0.000027716422],"category_scores_gemma":[0.00032720697,0.00023420907,0.000097329874,0.00065715663,0.00016638238,0.00012837042,0.0000858256,0.0003078116,0.000048558377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081700104,0.0004408006,0.16988854,0.00042797835,0.00009739776,0.0041371565,0.007539441,0.00003302989,0.66573006,0.00032220906,0.0008556359,0.14971074],"study_design_scores_gemma":[0.005130197,0.0018228531,0.44377556,0.0007648401,0.00018605785,0.00089062785,0.0038991615,0.00077307917,0.5209547,0.00029035742,0.020103103,0.0014094299],"about_ca_topic_score_codex":0.00015687905,"about_ca_topic_score_gemma":0.000041283307,"teacher_disagreement_score":0.27388704,"about_ca_system_score_codex":0.000079068865,"about_ca_system_score_gemma":0.00012898442,"threshold_uncertainty_score":0.9550769},"labels":[],"label_agreement":null},{"id":"W2049629344","doi":"10.1016/s1097-2765(01)00366-5","title":"C/EBPα Arrests Cell Proliferation through Direct Inhibition of Cdk2 and Cdk4","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":353,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of General Medical Sciences; National Institute on Aging","keywords":"Cyclin-dependent kinase 2; Biology; Cell growth; Cyclin-dependent kinase; Ccaat-enhancer-binding proteins; Kinase; Cell biology; Cyclin; Growth inhibition; Transcription factor; Cyclin E; Cell cycle; Molecular biology; Cell; Biochemistry; Nuclear protein; Protein kinase A; Gene","score_opus":0.008570563354507718,"score_gpt":0.2290458733850374,"score_spread":0.22047531003052967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049629344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9200046,0.003286,0.007937614,0.0002861947,0.00012188669,0.00066034176,0.00000786378,0.00007037066,0.0676251],"genre_scores_gemma":[0.99679655,0.00041660236,0.0015566465,0.00043678243,0.00006349653,0.000028930112,0.00008205548,0.000049224513,0.00056969776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868715,0.00006743877,0.0003027506,0.0003618765,0.00033493846,0.00024587332],"domain_scores_gemma":[0.99927396,0.000015184553,0.00012997825,0.00035833113,0.00011434666,0.00010817458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011962294,0.00019403451,0.00028625777,0.00010572373,0.000046931476,0.00001724629,0.000041551597,0.00016793777,0.000054790555],"category_scores_gemma":[0.00003541151,0.00019772974,0.000106303036,0.0002903274,0.00007294822,0.000079152895,0.00004100676,0.0001962411,0.00003096605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015337927,0.0002528002,0.0010609224,0.0002142067,0.000024874582,0.00040777706,0.0004560006,0.00013538443,0.99535704,0.000071889604,0.0008034196,0.0010623139],"study_design_scores_gemma":[0.0021751805,0.0003848874,0.0005369745,0.00013054657,0.00014435736,0.00006807796,0.00004109485,0.0003776612,0.9848504,0.00017778274,0.010925057,0.00018798563],"about_ca_topic_score_codex":0.00007170287,"about_ca_topic_score_gemma":0.000013622538,"teacher_disagreement_score":0.07679193,"about_ca_system_score_codex":0.00006510233,"about_ca_system_score_gemma":0.00009168924,"threshold_uncertainty_score":0.80631846},"labels":[],"label_agreement":null},{"id":"W2050456259","doi":"10.1016/s1097-2765(02)00590-7","title":"X-Ray Crystal Structure and Functional Analysis of Vaccinia Virus K3L Reveals Molecular Determinants for PKR Subversion and Substrate Recognition","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Protein kinase R; Biology; EIF-2 kinase; Vaccinia; RNA; Virus; Cell biology; Protein kinase A; Kinase; Virology; Genetics; Gene; Cyclin-dependent kinase 2","score_opus":0.015119388246275968,"score_gpt":0.2281956842129588,"score_spread":0.21307629596668284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050456259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99465275,0.0034208626,0.00093638327,0.000034802488,0.00005184396,0.00024620388,0.00050295744,0.000012406121,0.00014179588],"genre_scores_gemma":[0.9988848,0.00017601505,0.0002194353,0.00008990016,0.000006198021,0.00000972697,0.00031936783,0.0000138912765,0.0002806804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893725,0.00013415613,0.0002316469,0.00033776189,0.00006231329,0.00029686227],"domain_scores_gemma":[0.99948186,0.000075368764,0.00011123808,0.00017586637,0.00010171892,0.000053980806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013168114,0.00016064323,0.00030649488,0.00026531593,0.0001093813,0.000017520368,0.00007259027,0.00022570525,0.0005279933],"category_scores_gemma":[0.000048148,0.00015088682,0.0001284829,0.0002238295,0.00009865854,0.000064200634,0.000051726944,0.00014565536,0.00001332741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023112135,0.000048714635,0.0016704772,0.000049621125,0.00036392675,0.000022149348,0.000069100024,0.00001486257,0.9939078,0.0000086504015,0.00019339306,0.0034201453],"study_design_scores_gemma":[0.0016313744,0.00029716865,0.0155720655,0.0000145266,0.00061921147,0.000016440923,0.000037121263,0.00039444407,0.9804146,0.00030043419,0.00050200697,0.00020057795],"about_ca_topic_score_codex":0.000044078628,"about_ca_topic_score_gemma":0.000027052849,"teacher_disagreement_score":0.013901588,"about_ca_system_score_codex":0.000015437829,"about_ca_system_score_gemma":0.000013592372,"threshold_uncertainty_score":0.61529857},"labels":[],"label_agreement":null},{"id":"W2050970529","doi":"10.1016/j.molcel.2009.06.029","title":"Insights into the Bacterial Transferrin Receptor: The Structure of Transferrin-Binding Protein B from Actinobacillus pleuropneumoniae","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto; University of British Columbia","funders":"Howard Hughes Medical Institute","keywords":"Actinobacillus pleuropneumoniae; Biology; Transferrin; Transferrin receptor; Microbiology; Bacterial protein; Receptor; Biochemistry; Gene; Serotype","score_opus":0.004474927347413543,"score_gpt":0.18849977359312708,"score_spread":0.18402484624571355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050970529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968691,0.0005531422,0.0004184093,0.0009618666,0.00027446318,0.0005378433,0.00006754009,0.000017986618,0.00029968852],"genre_scores_gemma":[0.99874777,0.00013435082,0.00039192737,0.00019737291,0.00019837166,0.000007214623,0.00019541636,0.000031645766,0.00009590968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985189,0.00019058595,0.00033720525,0.0004669438,0.00019649144,0.00028986],"domain_scores_gemma":[0.999036,0.000009407571,0.00009623755,0.0007391186,0.00005727799,0.000061924344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006448733,0.0002942641,0.00023432431,0.000039895767,0.00014960476,0.000046300258,0.0007180106,0.0004054114,0.0000676133],"category_scores_gemma":[0.000018319544,0.00018460362,0.00018256911,0.0001561957,0.00018485678,0.000003765537,0.00007714153,0.0002892732,0.0000062448153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001615318,0.0000491489,0.000007712273,0.000007914273,0.000044433295,0.0000044106337,0.00026957423,0.000013380083,0.99484885,0.00017670915,0.00004321067,0.0043730983],"study_design_scores_gemma":[0.0005600396,0.00054003275,0.00016093173,0.000011552761,0.00003897209,0.0000023114153,0.00007355482,0.0000067729666,0.9587582,0.0003328072,0.039288152,0.00022668633],"about_ca_topic_score_codex":0.00007133174,"about_ca_topic_score_gemma":0.000094321585,"teacher_disagreement_score":0.039244942,"about_ca_system_score_codex":0.000013732044,"about_ca_system_score_gemma":0.00006851821,"threshold_uncertainty_score":0.7527917},"labels":[],"label_agreement":null},{"id":"W2051509934","doi":"10.1016/j.molcel.2008.04.001","title":"A Three-Dimensional Model of a Group II Intron RNA and Its Interaction with the Intron-Encoded Reverse Transcriptase","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of General Medical Sciences","keywords":"Biology; Intron; Group II intron; Reverse transcriptase; RNA; Genetics; Retrotransposon; Computational biology; Gene; RNA splicing; Genome; Transposable element","score_opus":0.012043394159696776,"score_gpt":0.21923109583712602,"score_spread":0.20718770167742925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051509934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.977794,0.0009476836,0.020471986,0.00032745925,0.000017127935,0.00021663793,0.000010648165,0.0000050374256,0.00020943854],"genre_scores_gemma":[0.9980584,0.00009388999,0.0010918368,0.00024899121,0.000024293604,0.000018411101,0.000036199956,0.000017930524,0.00041006168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99917936,0.000042540083,0.00012766545,0.00025237806,0.00019621877,0.0002018424],"domain_scores_gemma":[0.9995542,0.000006174086,0.000056976234,0.00022185087,0.000080575344,0.00008021744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116424555,0.00012946445,0.000121193254,0.00003703018,0.00013554734,0.0000075601174,0.00011957709,0.00007031025,0.000007897558],"category_scores_gemma":[0.000014956126,0.00009047025,0.000062977495,0.00006525231,0.000096217445,0.000008035392,0.00008033703,0.0001485444,0.0000014589943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004158837,0.00007472553,0.000027176513,0.000022459784,0.00003362425,0.00002026881,0.00008285156,0.0027141818,0.9955349,0.000047367907,0.000808574,0.00021799044],"study_design_scores_gemma":[0.001117755,0.00074449735,0.000035456436,0.000019413621,0.000026098083,0.00003790603,0.000043388565,0.062826104,0.93411285,0.000024674206,0.00087050156,0.00014138564],"about_ca_topic_score_codex":0.00005887694,"about_ca_topic_score_gemma":0.000056004832,"teacher_disagreement_score":0.061422076,"about_ca_system_score_codex":0.00001032286,"about_ca_system_score_gemma":0.000059065937,"threshold_uncertainty_score":0.36892697},"labels":[],"label_agreement":null},{"id":"W2051753515","doi":"10.1016/j.molcel.2007.01.035","title":"H2B Ubiquitylation Acts as a Barrier to Ctk1 Nucleosomal Recruitment Prior to Removal by Ubp8 within a SAGA-Related Complex","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":223,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Science Foundation","keywords":"Histone H2B; Biology; Ubiquitin; RNA polymerase II; Histone; Cell biology; Transcription (linguistics); Histone methyltransferase; Phosphorylation; Transcription factor; Biochemistry; Gene; Gene expression; Promoter","score_opus":0.016504780661842338,"score_gpt":0.2763396494063053,"score_spread":0.25983486874446293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051753515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9756151,0.00038865255,0.013661298,0.000546806,0.0002947418,0.0016296346,0.00002512207,0.00005781708,0.0077808457],"genre_scores_gemma":[0.98755,0.000008840149,0.006239014,0.001730623,0.000118261305,0.00005108757,0.00043055127,0.000091095455,0.003780483],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99763817,0.00010210607,0.00051536586,0.00077239634,0.00042191512,0.00055003224],"domain_scores_gemma":[0.9985748,0.000010396594,0.00016538019,0.0006321299,0.00015050627,0.0004668007],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00044816406,0.00033316546,0.00023667554,0.00014786092,0.00013298258,0.000053787837,0.00025777894,0.0003815266,0.000116238174],"category_scores_gemma":[0.00009147996,0.00037774013,0.00015080969,0.00040622693,0.000039650113,0.000007950833,0.00020165142,0.00016426324,0.00024042354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043017854,0.00008597028,0.000050757775,0.000013459997,0.00006335525,0.000042902928,0.00035949674,0.0031772992,0.9862873,0.000055254117,0.003391898,0.006042111],"study_design_scores_gemma":[0.0009956724,0.0005704632,0.0007203387,0.000025411344,0.000043652402,0.00003792166,0.000058227135,0.00027509438,0.8158711,0.00004693736,0.18094276,0.00041241382],"about_ca_topic_score_codex":0.00005197025,"about_ca_topic_score_gemma":0.000108398475,"teacher_disagreement_score":0.17755087,"about_ca_system_score_codex":0.00018390795,"about_ca_system_score_gemma":0.0001343876,"threshold_uncertainty_score":0.99986744},"labels":[],"label_agreement":null},{"id":"W2052373759","doi":"10.1016/s1097-2765(01)00429-4","title":"Enzymatic Activity Associated with Class II HDACs Is Dependent on a Multiprotein Complex Containing HDAC3 and SMRT/N-CoR","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":750,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of General Medical Sciences","keywords":"Biology; Multiprotein complex; Enzyme; Cell biology; Genetics; Biochemistry; Gene","score_opus":0.021450738444154835,"score_gpt":0.24287576300409372,"score_spread":0.2214250245599389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052373759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928797,0.00031860682,0.0008311895,0.00027659675,0.0000254435,0.00055374444,0.000038387487,0.0000283624,0.0050479984],"genre_scores_gemma":[0.99634427,0.000022495042,0.0003513356,0.0005594293,0.00003489946,0.000066286506,0.00005720137,0.00006310332,0.0025009715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998001,0.00022820696,0.00019972336,0.0006229359,0.00045810576,0.00049004087],"domain_scores_gemma":[0.99903095,0.00003213145,0.0001303228,0.0005017563,0.00011023046,0.00019463974],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022383966,0.0002976286,0.00027690252,0.000085948355,0.00024747683,0.000050339273,0.0001937745,0.00022991627,0.000096307725],"category_scores_gemma":[0.00014456097,0.0002822999,0.00008725356,0.00013943383,0.00014760692,0.00000590199,0.00019033763,0.00030280816,0.000038200964],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020690383,0.0003854092,0.0001583751,0.000031944684,0.000083028644,0.00013816691,0.00024261029,0.00006678222,0.99582493,0.000007210552,0.0016576867,0.0011969644],"study_design_scores_gemma":[0.0023345214,0.0021209726,0.0002836152,0.000053677963,0.000028623806,0.000014924913,0.000053690725,0.0035929433,0.9851309,0.000004306648,0.0059947046,0.00038709538],"about_ca_topic_score_codex":0.000069168396,"about_ca_topic_score_gemma":0.00008242971,"teacher_disagreement_score":0.010693994,"about_ca_system_score_codex":0.00009076048,"about_ca_system_score_gemma":0.00004204518,"threshold_uncertainty_score":0.9999629},"labels":[],"label_agreement":null},{"id":"W2052762081","doi":"10.1016/s1097-2765(01)00302-1","title":"Activated MEK1 Binds the Nuclear MyoD Transcriptional Complex to Repress Transactivation","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":121,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"MyoD; PITX2; Transactivation; Myogenesis; Biology; MyoD Protein; Psychological repression; Phosphorylation; Transcription factor; Cell biology; Myogenin; Myocyte; Molecular biology; Genetics; Homeobox; Gene; Gene expression","score_opus":0.011887767076948762,"score_gpt":0.22887818069746602,"score_spread":0.21699041362051724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052762081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9737901,0.00010259548,0.013995097,0.0017141985,0.00006846964,0.00024758143,0.000009907309,0.000023299952,0.010048739],"genre_scores_gemma":[0.9958657,0.000035417106,0.0002560546,0.003244333,0.000050552804,0.000024568788,0.00015539648,0.000027912847,0.00034006734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990494,0.000102811966,0.00014214785,0.0003472981,0.00012890599,0.00022938917],"domain_scores_gemma":[0.9994569,0.0000073723036,0.000038037913,0.00037333992,0.000049904356,0.000074443094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008632851,0.00014897829,0.00010292773,0.00003424866,0.00014995951,0.000018601002,0.00024205068,0.00013037668,0.00023407846],"category_scores_gemma":[0.000013243586,0.00012544505,0.00011775503,0.00014410749,0.00006699421,0.0000044505896,0.000026808822,0.00010565094,0.000035837606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036396555,0.00010370915,0.000037569018,0.000005647208,0.000035184737,0.000004000926,0.00011337301,0.0012799191,0.99505377,0.00018559335,0.0016104252,0.0012068436],"study_design_scores_gemma":[0.00090031966,0.00028996397,0.005842402,0.0000049068767,0.000027025226,0.000007760491,0.00014300423,0.00017888933,0.77210796,0.00022215972,0.21999656,0.00027905367],"about_ca_topic_score_codex":0.000025133426,"about_ca_topic_score_gemma":0.0000067333826,"teacher_disagreement_score":0.22294581,"about_ca_system_score_codex":0.000008142627,"about_ca_system_score_gemma":0.000023490305,"threshold_uncertainty_score":0.51155007},"labels":[],"label_agreement":null},{"id":"W2053758959","doi":"10.1016/j.molcel.2010.12.011","title":"Genome-wide Identification of Polycomb-Associated RNAs by RIP-seq","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":983,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Ministry of Education, Science and Technology; Howard Hughes Medical Institute","keywords":"PRC2; Biology; Polycomb-group proteins; Genetics; Transcriptome; Genome; Gene; RNA; Computational biology; Chromatin; Histone H3; Gene expression; Repressor","score_opus":0.003292284781495733,"score_gpt":0.21066232985103775,"score_spread":0.20737004506954201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053758959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98479384,0.0012311664,0.010944844,0.000061017945,0.0001893688,0.00016111854,0.000036551344,0.000010445743,0.0025716256],"genre_scores_gemma":[0.9973455,0.00010162681,0.0003180539,0.00007343084,0.000034162844,0.000009916715,0.0005982272,0.0000306277,0.0014884531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989664,0.000061124425,0.00031413988,0.00029341743,0.00017238097,0.00019255969],"domain_scores_gemma":[0.9991169,0.000009904391,0.00022075188,0.0004480526,0.00012880885,0.000075571996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027228455,0.000133499,0.00012551328,0.000044431043,0.000046974223,0.000022358136,0.00020851329,0.00021804644,0.000028337354],"category_scores_gemma":[0.00012794588,0.00014723431,0.00010638374,0.00010642263,0.000059205795,0.0000026640732,0.00006254092,0.00011851139,0.000016008124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000087867365,0.000108811735,0.003262608,0.000009589603,0.00002278034,0.0000012245515,0.000022797743,0.00003758858,0.99601156,0.000018221996,0.00014423825,0.00035181292],"study_design_scores_gemma":[0.00032319938,0.00008454935,0.008854116,0.0000014932278,0.000022641867,2.4999744e-7,0.0000081196795,0.000045424964,0.9763847,0.0002663,0.0138537865,0.00015543138],"about_ca_topic_score_codex":0.000027846507,"about_ca_topic_score_gemma":0.000016355007,"teacher_disagreement_score":0.019626852,"about_ca_system_score_codex":0.000008165695,"about_ca_system_score_gemma":0.00003863397,"threshold_uncertainty_score":0.6004041},"labels":[],"label_agreement":null},{"id":"W2055502644","doi":"10.1016/j.molcel.2010.07.013","title":"S-Nitrosylation of β-Catenin by eNOS-Derived NO Promotes VEGF-Induced Endothelial Cell Permeability","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Nitric Oxide and Endothelin Effects","field":"Medicine","cited_by":183,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Enos; S-Nitrosylation; VEGF receptors; Catenin; Cell biology; Endothelial nitric oxide synthase; Endothelial stem cell; Cell; Nitric oxide; Cancer research; Biochemistry; Wnt signaling pathway; Signal transduction; Nitric oxide synthase; Endocrinology; In vitro","score_opus":0.006035110755155407,"score_gpt":0.22423988202788253,"score_spread":0.21820477127272714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055502644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869115,0.00010954589,0.0003851746,0.000116326184,0.00026502227,0.0006898348,0.000028027334,0.000070779155,0.011423802],"genre_scores_gemma":[0.99649674,0.000007760252,0.0021919569,0.00014625887,0.00012216615,0.00002725355,0.00006789422,0.00005292675,0.0008870191],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984997,0.00009830592,0.00034059747,0.00038288088,0.00034980985,0.00032869537],"domain_scores_gemma":[0.99888384,0.000085112064,0.00015197264,0.0005055733,0.00020116741,0.00017232953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002870387,0.0002337109,0.00037440876,0.00008748294,0.000048646252,0.00001416666,0.00013942525,0.00021408865,0.000279898],"category_scores_gemma":[0.00020591672,0.00021012458,0.00018717059,0.000157315,0.000080356855,0.000052937736,0.00004589542,0.00041921047,0.00022086022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015399428,0.0004959515,0.0018655929,0.00024725238,0.00001771845,0.000029226348,0.00017754793,0.0000010230417,0.9958682,0.0000072653093,0.00016210129,0.00097411603],"study_design_scores_gemma":[0.0023350774,0.00053147174,0.0013863307,0.000018245833,0.00010140875,0.000007928496,0.000021074826,0.00029453757,0.9939084,0.0000865056,0.0011229205,0.00018610414],"about_ca_topic_score_codex":0.00013748537,"about_ca_topic_score_gemma":0.0000030281535,"teacher_disagreement_score":0.010536783,"about_ca_system_score_codex":0.000027732678,"about_ca_system_score_gemma":0.00010629322,"threshold_uncertainty_score":0.8568632},"labels":[],"label_agreement":null},{"id":"W2055753459","doi":"10.1016/s1097-2765(00)80414-1","title":"VASA Mediates Translation through Interaction with a Drosophila yIF2 Homolog","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":171,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Biology; Germline; Translation (biology); Genetics; Cell biology; Gene; RNA-binding protein; Mutant; Germ cell; Messenger RNA","score_opus":0.009392100060768025,"score_gpt":0.22104681253405972,"score_spread":0.2116547124732917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055753459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94759744,0.0011746577,0.016626338,0.0003162846,0.00008238149,0.0003083314,0.000009448099,0.000032990214,0.033852115],"genre_scores_gemma":[0.9930935,0.00025804766,0.0051241927,0.00041092327,0.00009519622,0.000048656944,0.00011919182,0.00003694827,0.00081336865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906814,0.00008403063,0.0001494263,0.0003453184,0.00014353498,0.0002095443],"domain_scores_gemma":[0.99955654,0.000008597919,0.000051660667,0.00030192744,0.000029985727,0.000051298503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008150655,0.00017439242,0.00012370977,0.000022821725,0.00006525312,0.00002733147,0.00013271948,0.0001568908,0.00037431708],"category_scores_gemma":[0.000005499144,0.00015343825,0.000086643304,0.000077803976,0.00004127174,0.000008503665,0.000012078189,0.00007847292,0.00008656109],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016118569,0.00006251894,0.000050438746,0.0000133793765,0.000029443938,0.000025503587,0.00009633401,0.00022902325,0.98495877,0.0000356565,0.00013249242,0.014205241],"study_design_scores_gemma":[0.0004673597,0.0003853654,0.00003630369,0.00001355376,0.000031491803,0.000024016479,0.000031201485,0.000036831956,0.95577866,0.00055426994,0.0424287,0.00021227385],"about_ca_topic_score_codex":0.000021115733,"about_ca_topic_score_gemma":0.000007819181,"teacher_disagreement_score":0.045496017,"about_ca_system_score_codex":0.0000063518355,"about_ca_system_score_gemma":0.00002631748,"threshold_uncertainty_score":0.625703},"labels":[],"label_agreement":null},{"id":"W2056625030","doi":"10.1016/j.molcel.2015.02.013","title":"Cbx2 Targets PRC1 to Constitutive Heterochromatin in Mouse Zygotes in a Parent-of-Origin-Dependent Manner","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; Princess Margaret Cancer Centre; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Heterochromatin protein 1; Heterochromatin; Chromodomain; PRC2; Genetics; Histone; Histone H3; Chromatin; Constitutive heterochromatin; Cell biology; DNA methylation; Gene; Gene expression; RNA","score_opus":0.019058795922398435,"score_gpt":0.2720989655143845,"score_spread":0.25304016959198605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056625030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98868513,0.0020478382,0.0054636486,0.000046012367,0.00009197816,0.0003401445,0.00001757487,0.000005587289,0.0033020605],"genre_scores_gemma":[0.9967764,0.000052169038,0.0027154032,0.000096490774,0.000022813938,0.000035489542,0.00006991828,0.000020023179,0.00021128223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880123,0.00010640037,0.00030849798,0.0003477818,0.00018647885,0.00024963924],"domain_scores_gemma":[0.9994089,0.0000073570786,0.00007920903,0.00029392447,0.000081567254,0.00012904074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024985775,0.0001606736,0.00018811313,0.00012528045,0.000011868702,0.0000136751905,0.0001578206,0.00012839289,0.000006625139],"category_scores_gemma":[0.000094269984,0.00016757689,0.000053180367,0.0001287618,0.000041775747,0.000003612123,0.00011870051,0.00008070503,0.000013854178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058600763,0.00015202677,0.014292693,0.000020723166,0.000009235042,0.0000390477,0.000273708,0.0053257104,0.9792997,0.000050072602,0.00005079672,0.00042765518],"study_design_scores_gemma":[0.00094291766,0.00025542293,0.0010759037,0.000018506495,0.0000052131004,8.336814e-7,0.000106972286,0.00012695744,0.9929347,0.00017403625,0.004156145,0.00020239902],"about_ca_topic_score_codex":0.00013027538,"about_ca_topic_score_gemma":0.00018496551,"teacher_disagreement_score":0.013634962,"about_ca_system_score_codex":0.00003786873,"about_ca_system_score_gemma":0.00009551539,"threshold_uncertainty_score":0.6833587},"labels":[],"label_agreement":null},{"id":"W2056727374","doi":"10.1016/s1097-2765(00)80258-0","title":"Multiple Links between the NuA4 Histone Acetyltransferase Complex and Epigenetic Control of Transcription","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":266,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"","keywords":"Biology; Histone acetyltransferase; Histone; Epigenetics; Cell biology; Transcription (linguistics); Genetics; Computational biology; Gene","score_opus":0.010551995280047953,"score_gpt":0.23275974731050683,"score_spread":0.22220775203045887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056727374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95357066,0.0038656169,0.040585082,0.00040582233,0.00001798623,0.00026619202,0.00007094587,0.0000060451744,0.0012116302],"genre_scores_gemma":[0.9982973,0.000596377,0.0002719847,0.00031982618,0.000045294968,0.000026567657,0.000101998776,0.00001811281,0.0003225869],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926335,0.00007983722,0.00019093418,0.00022436312,0.00009571852,0.0001458241],"domain_scores_gemma":[0.9995429,0.000010078507,0.000034564164,0.00032107026,0.00003694964,0.0000544634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000096273914,0.000115342715,0.00013238263,0.000017044433,0.00007339576,0.000010807327,0.0001368823,0.00013278995,0.000113174436],"category_scores_gemma":[0.000004260719,0.00009564341,0.00008773907,0.00005298531,0.00013569584,0.0000019066249,0.0000066196635,0.00009626151,0.0000055908545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045499855,0.000039918166,0.0006956778,0.000016917124,0.000028864379,8.339316e-7,0.00006886258,0.000304185,0.9817015,0.000010217636,0.00009230066,0.016995242],"study_design_scores_gemma":[0.0017737984,0.00021644417,0.013228504,0.000006719579,0.00010246354,0.0000025535699,0.000029720319,0.00043353214,0.92539257,0.00003620412,0.058593377,0.00018408528],"about_ca_topic_score_codex":0.000045112036,"about_ca_topic_score_gemma":0.000008177836,"teacher_disagreement_score":0.058501076,"about_ca_system_score_codex":0.0000065550125,"about_ca_system_score_gemma":0.000022900535,"threshold_uncertainty_score":0.3900225},"labels":[],"label_agreement":null},{"id":"W2057203166","doi":"10.1016/j.molcel.2007.07.032","title":"SIRT1 Deacetylates and Positively Regulates the Nuclear Receptor LXR","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":625,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Ottawa; University of Texas Southwestern Medical Center; Massachusetts General Hospital; Leukemia and Lymphoma Society","keywords":"Liver X receptor; Biology; ABCA1; Sirtuin 1; Nuclear receptor; Sirtuin; Cell biology; Acetylation; Small heterodimer partner; Biochemistry; Transporter; Downregulation and upregulation; Transcription factor; Gene","score_opus":0.004425040889042614,"score_gpt":0.21043413768855096,"score_spread":0.20600909679950835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057203166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98426354,0.0022959218,0.00010591765,0.0017640758,0.00012170793,0.00022694051,0.0000021349076,0.000049802824,0.01116993],"genre_scores_gemma":[0.9940098,0.00010071813,0.001041073,0.0027536196,0.00016307762,0.0000017595055,0.0000075154667,0.000035341505,0.0018871161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991627,0.00003387822,0.00015663715,0.00021762696,0.00017708477,0.00025208227],"domain_scores_gemma":[0.9994726,0.000040506853,0.00004545967,0.00024975158,0.00004755406,0.00014411942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002875347,0.0001368581,0.00017525718,0.000048420443,0.00008785637,0.000030198213,0.00007305233,0.0000852247,0.000077213954],"category_scores_gemma":[0.000028712106,0.000092065,0.00007685624,0.00011257356,0.00010408214,0.00003272935,0.000057193705,0.00018518032,0.00008539647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001227546,0.000069072456,0.0006157724,0.000035632096,0.000033868237,0.000044388697,0.0008230525,8.867725e-7,0.98455495,0.0004423634,0.0010476775,0.012209609],"study_design_scores_gemma":[0.001473881,0.0001628276,0.049605593,0.0000548847,0.00014453066,0.00006216067,0.00039815265,0.000036903533,0.65536445,0.00009093119,0.29242158,0.00018409605],"about_ca_topic_score_codex":0.000022724356,"about_ca_topic_score_gemma":0.0000015947603,"teacher_disagreement_score":0.32919046,"about_ca_system_score_codex":0.000014184179,"about_ca_system_score_gemma":0.000012796627,"threshold_uncertainty_score":0.37543017},"labels":[],"label_agreement":null},{"id":"W2057663036","doi":"10.1016/j.molcel.2005.09.022","title":"Recognition of RNA Polymerase II and Transcription Bubbles by XPG, CSB, and TFIIH: Insights for Transcription-Coupled Repair and Cockayne Syndrome","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":222,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biological and Environmental Research; National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; Canadian Institutes of Health Research; Office of Science; U.S. Department of Energy","keywords":"Transcription factor II H; Biology; Cockayne syndrome; Helicase; Transcription (linguistics); RNA polymerase II; Cell biology; Nucleotide excision repair; Transcription factor; DNA repair; Molecular biology; Genetics; RNA; DNA; Gene; Gene expression; Promoter","score_opus":0.006397129963079442,"score_gpt":0.19868639668241936,"score_spread":0.1922892667193399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057663036","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978071,0.014086157,0.006905535,0.00013807556,0.000047625184,0.00048148152,0.000090660375,0.000030399593,0.00014908134],"genre_scores_gemma":[0.9931723,0.0011812205,0.0046861493,0.0002285319,0.000026544756,0.000052971314,0.000322835,0.000038083428,0.0002913942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988925,0.00005128493,0.00027215984,0.0004661401,0.00011630366,0.00020161751],"domain_scores_gemma":[0.99952304,0.000008999878,0.000085374726,0.00019906729,0.000064618675,0.000118877426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012618022,0.00021159441,0.00022603963,0.000067037545,0.00010606064,0.000018297624,0.00005664108,0.00020865959,0.000011717702],"category_scores_gemma":[0.0000145710355,0.00022407308,0.00010016026,0.00005588995,0.000093335766,0.000016213395,0.000028046048,0.000062263854,5.948788e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013954671,0.00012325333,0.000012692955,0.00015724244,0.00005131673,0.0000054777624,0.0001662643,0.0000030464319,0.9960094,0.00003909169,0.00014289547,0.0031497378],"study_design_scores_gemma":[0.0019348054,0.0009897924,0.00006318292,0.000028312226,0.00014592789,0.000049696002,0.00006839087,0.0008949273,0.9909943,0.00030258764,0.0042641037,0.0002639755],"about_ca_topic_score_codex":0.000028622986,"about_ca_topic_score_gemma":0.00002192993,"teacher_disagreement_score":0.015101286,"about_ca_system_score_codex":0.000008894641,"about_ca_system_score_gemma":0.000020344529,"threshold_uncertainty_score":0.91374356},"labels":[],"label_agreement":null},{"id":"W2057831681","doi":"10.1016/j.molcel.2010.01.002","title":"BACH1/FANCJ Acts with TopBP1 and Participates Early in DNA Replication Checkpoint Control","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":158,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Cancer Institute; National Institutes of Health; U.S. Department of Defense","keywords":"Biology; Origin recognition complex; G2-M DNA damage checkpoint; DNA replication; Control of chromosome duplication; Eukaryotic DNA replication; Cell biology; Minichromosome maintenance; Chromatin; DNA damage; Replication factor C; DNA replication factor CDT1; Helicase; DNA; Cell cycle checkpoint; Genetics; Cell cycle; Cancer; Gene","score_opus":0.004165359701840631,"score_gpt":0.21016434872320341,"score_spread":0.2059989890213628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057831681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99505216,0.00014565316,0.0020540478,0.00017723045,0.00004292028,0.0003002289,0.0000038597605,0.000018180473,0.0022057255],"genre_scores_gemma":[0.9975146,0.000010554516,0.0018075051,0.00027752627,0.00003339848,0.00007570686,0.000023948285,0.000029740648,0.00022702383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896824,0.000044938562,0.00015989317,0.0004687227,0.000106165164,0.0002520659],"domain_scores_gemma":[0.99914753,0.0000065452023,0.000067417954,0.0006294156,0.000046297402,0.00010278653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021994156,0.00014776949,0.0001312847,0.000034581506,0.000027633712,0.000030599793,0.00011921801,0.00014726282,0.0000120013265],"category_scores_gemma":[0.000056083827,0.00013460798,0.00003775438,0.00006527831,0.000054012326,0.00000481038,0.000052922624,0.00013556774,0.000009998048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006936875,0.00005725482,0.004024744,0.000011539479,0.000012076504,0.000020205533,0.00005788704,0.0000120170735,0.99493283,0.00016317549,0.000011559427,0.000627355],"study_design_scores_gemma":[0.0010690807,0.00030767726,0.0068816035,0.0000066834937,0.000018274588,0.000010479039,0.0000133940175,0.00017088267,0.98765606,0.0001286767,0.0035579933,0.00017921717],"about_ca_topic_score_codex":0.000027984845,"about_ca_topic_score_gemma":0.00008524489,"teacher_disagreement_score":0.0072767795,"about_ca_system_score_codex":0.0000058808596,"about_ca_system_score_gemma":0.00003425047,"threshold_uncertainty_score":0.5489154},"labels":[],"label_agreement":null},{"id":"W2057870876","doi":"10.1016/s1097-2765(03)00238-7","title":"A New Link for a Linker Histone","year":2003,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Biology; Histone; Histone H1; Histone code; Linker; Chromatin; Genetics; Cell biology; Histone methyltransferase; Histone-modifying enzymes; Computational biology; Nucleosome; Gene","score_opus":0.007936819429461386,"score_gpt":0.23278989342406395,"score_spread":0.22485307399460255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057870876","genre_codex":"methods","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015415547,0.016357131,0.60219854,0.33680955,0.0037380503,0.0038945628,0.00027413803,0.00020417705,0.03498233],"genre_scores_gemma":[0.00022873074,0.00008436531,0.06427407,0.75628704,0.0039714673,0.00022370256,0.003003457,0.00040270318,0.17152448],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976417,0.00009507878,0.00033820962,0.0010011578,0.0002805187,0.0006433336],"domain_scores_gemma":[0.9983646,0.000012280609,0.00019881857,0.0011638138,0.00011927444,0.00014116919],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00013608571,0.00053669786,0.00040603377,0.00009320386,0.000057405687,0.000046902518,0.00048630085,0.0018953189,0.000111556976],"category_scores_gemma":[0.000058703317,0.0005915474,0.0006063038,0.000081348975,0.000036205907,0.0000015220855,0.00012777152,0.00065139134,0.00010835888],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014402048,0.000012273065,3.3377742e-7,0.00009592768,0.000060486076,0.00013210505,0.0000055510995,0.0000041216394,0.34852204,0.000011645701,0.6501557,0.0009853845],"study_design_scores_gemma":[0.0005138845,0.00022872709,8.18729e-8,0.000011786897,0.000088929206,0.00001565473,0.0000012096041,0.000006920386,0.40035927,0.00029254434,0.59807426,0.00040669882],"about_ca_topic_score_codex":0.00001674693,"about_ca_topic_score_gemma":0.0000026960618,"teacher_disagreement_score":0.53792447,"about_ca_system_score_codex":0.00005248676,"about_ca_system_score_gemma":0.00037252042,"threshold_uncertainty_score":0.9996536},"labels":[],"label_agreement":null},{"id":"W2058368225","doi":"10.1016/s1097-2765(03)00497-0","title":"A Snf2 Family ATPase Complex Required for Recruitment of the Histone H2A Variant Htz1","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":590,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"National Institute of General Medical Sciences; University of Toronto","keywords":"Biology; Histone; ATPase; Genetics; Histone H1; Cell biology; DNA; Enzyme; Biochemistry","score_opus":0.05350423081673022,"score_gpt":0.2977057244591858,"score_spread":0.24420149364245558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058368225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8626407,0.0051568076,0.10657933,0.0004402042,0.00038900864,0.0019337077,0.00015612287,0.000013862694,0.022690248],"genre_scores_gemma":[0.992335,0.00007549421,0.004326056,0.0006266539,0.000026199155,0.0002008167,0.000080578,0.000026012432,0.002303139],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99912995,0.000083242565,0.00021260737,0.00027466015,0.00011519806,0.00018431892],"domain_scores_gemma":[0.99908906,0.000005669243,0.000118240016,0.0006417158,0.00009622537,0.00004910976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015662856,0.00012313294,0.00012504931,0.000018616029,0.000080583675,0.000009095294,0.00020566265,0.00008366794,0.000018850262],"category_scores_gemma":[0.000032450185,0.000099032244,0.00017093298,0.0000853575,0.00007454691,0.0000013846226,0.0000419959,0.000039200255,0.000003542071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031131145,0.000111026944,0.000016704555,0.000019978223,0.000027590619,0.0000018319059,0.000023867226,0.00010855954,0.9931491,0.002483525,0.0033958333,0.0006308248],"study_design_scores_gemma":[0.00061123463,0.000115448725,0.00017596791,0.000005511091,0.00003238617,0.000002862527,0.00002697422,0.000055077347,0.647301,0.00019797789,0.35136846,0.00010709599],"about_ca_topic_score_codex":0.000020614538,"about_ca_topic_score_gemma":0.0000046822415,"teacher_disagreement_score":0.3479726,"about_ca_system_score_codex":0.000029174218,"about_ca_system_score_gemma":0.000110193105,"threshold_uncertainty_score":0.4038418},"labels":[],"label_agreement":null},{"id":"W2058970225","doi":"10.1016/j.molcel.2010.08.011","title":"The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2235,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences","keywords":"Biology; SR protein; RNA splicing; Alternative splicing; Cell biology; MALAT1; RNA-binding protein; Phosphorylation; Splicing factor; RNA; Gene expression; Long non-coding RNA; Regulation of gene expression; Messenger RNA; Gene; Genetics","score_opus":0.005517908239822631,"score_gpt":0.23206917064172605,"score_spread":0.22655126240190343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058970225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916643,0.000406806,0.004253616,0.00022707981,0.00018962193,0.00033341,0.000010207439,0.000034292476,0.0028806552],"genre_scores_gemma":[0.9960296,0.0000851215,0.0012308906,0.00017520114,0.00018536726,0.0000120941495,0.000055218847,0.000081755534,0.0021447153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804795,0.00009127469,0.00032669888,0.00054308266,0.0003642617,0.0006267131],"domain_scores_gemma":[0.9988325,0.000053826265,0.00018686289,0.0006084211,0.00013588852,0.00018250306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003870324,0.0002792867,0.00018485734,0.000050375907,0.0005706603,0.00020452242,0.0004436911,0.00019522566,0.000032188753],"category_scores_gemma":[0.00018634347,0.00023267708,0.00015992622,0.00014277876,0.00011173399,0.000015522315,0.00024562998,0.00044667072,0.00002224769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050573886,0.000020660978,0.00046977773,0.000013215465,0.000041530686,0.000011371746,0.000106606676,0.0003811047,0.9906926,0.00017436538,0.00027496376,0.0077632414],"study_design_scores_gemma":[0.00049012166,0.00011484996,0.0003407734,0.000018653891,0.0000121604,0.000006497247,0.00012450592,0.025233975,0.9691181,0.00009408166,0.004160117,0.00028615666],"about_ca_topic_score_codex":0.0001630896,"about_ca_topic_score_gemma":0.00003804794,"teacher_disagreement_score":0.02485287,"about_ca_system_score_codex":0.00003567029,"about_ca_system_score_gemma":0.000042892763,"threshold_uncertainty_score":0.9488296},"labels":[],"label_agreement":null},{"id":"W2059698383","doi":"10.1016/s1097-2765(02)00826-2","title":"A Conserved RING Finger Protein Required for Histone H2B Monoubiquitination and Cell Size Control","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":451,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Histone H2B; Ring finger; Cell biology; Histone; Histone H3; Genetics; Computational biology; DNA; Gene","score_opus":0.00961528277354966,"score_gpt":0.2281045073359379,"score_spread":0.21848922456238823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059698383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9580721,0.0025686095,0.02774686,0.00014771872,0.0000691796,0.0014008397,0.00003456964,0.000027128388,0.009932992],"genre_scores_gemma":[0.98942256,0.000018950794,0.0068197194,0.00054342166,0.000043507323,0.0003553507,0.000042147538,0.000049352915,0.002704976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987045,0.00014776463,0.00023801127,0.00045367834,0.00011451415,0.00034155775],"domain_scores_gemma":[0.9993023,0.000032710075,0.00012956646,0.00029849715,0.00012283395,0.00011403842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003506014,0.0002168447,0.00019579227,0.000033476812,0.00011989272,0.00004053638,0.00010865553,0.00019193489,0.000024759514],"category_scores_gemma":[0.00026598835,0.00023678852,0.000112308226,0.0000539254,0.00006504616,0.0000052117944,0.00003586982,0.00008383921,0.0000067549845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010904906,0.00007714871,0.00005771618,0.00013245664,0.00001733998,0.000008748615,0.000046874924,0.000014790712,0.9987013,0.0003851188,0.00016917185,0.00028033674],"study_design_scores_gemma":[0.0029305185,0.00038165026,0.000026396507,0.000017380225,0.00003238149,0.0000060623533,0.000031284686,0.00015128989,0.9659839,0.00039525813,0.029755764,0.00028810432],"about_ca_topic_score_codex":0.000010513899,"about_ca_topic_score_gemma":0.000003959223,"teacher_disagreement_score":0.03271734,"about_ca_system_score_codex":0.000020963753,"about_ca_system_score_gemma":0.00008193424,"threshold_uncertainty_score":0.96559554},"labels":[],"label_agreement":null},{"id":"W2060234934","doi":"10.1016/s1097-2765(00)00104-0","title":"Competitive Recruitment of CBP and Rb-HDAC Regulates UBF Acetylation and Ribosomal Transcription","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":128,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"National Institute of General Medical Sciences","keywords":"Biology; Acetylation; Transcription (linguistics); Molecular biology; Chromatin remodeling; RNA polymerase II; Transcription factor; Acetyltransferase; Cell biology; P300-CBP Transcription Factors; Histone acetyltransferase; Chromatin; Promoter; DNA; Gene expression; Biochemistry; Histone Acetyltransferases; Gene","score_opus":0.011809594480646555,"score_gpt":0.23168888073206031,"score_spread":0.21987928625141376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060234934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874107,0.005608005,0.00055414776,0.00012444603,0.00001742285,0.00022729611,0.000017434877,0.000004884604,0.0060356124],"genre_scores_gemma":[0.9964879,0.0018458753,0.00064738136,0.00007240698,0.000020611418,0.000026500487,0.00009407619,0.000010922251,0.0007942939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994335,0.000045245208,0.00013863921,0.00021682163,0.00007078887,0.000094980445],"domain_scores_gemma":[0.9997242,0.0000031316401,0.000043821252,0.00015142336,0.000036610814,0.000040787952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006745798,0.00009254641,0.000107081934,0.000021719981,0.000040520674,0.000012435458,0.000039978087,0.00007781251,0.00004083105],"category_scores_gemma":[0.0000027501353,0.000090340276,0.000041697225,0.000039676226,0.000075822034,0.0000039533957,0.000011746176,0.00003336118,0.0000019441322],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039939834,0.000037790156,0.0002259017,0.000020097812,0.000021642998,8.6163016e-7,0.000087928245,0.00005548339,0.9845542,0.0007711281,0.000033489614,0.014151558],"study_design_scores_gemma":[0.00050671544,0.00019706592,0.007069746,0.000014611811,0.000042425465,0.000003406575,0.000059861755,0.000117900425,0.9528064,0.00013363844,0.03892678,0.000121437384],"about_ca_topic_score_codex":0.000014838814,"about_ca_topic_score_gemma":0.0000062195586,"teacher_disagreement_score":0.03889329,"about_ca_system_score_codex":0.0000056395193,"about_ca_system_score_gemma":0.000013943317,"threshold_uncertainty_score":0.36839697},"labels":[],"label_agreement":null},{"id":"W2060444223","doi":"10.1016/j.molcel.2015.03.023","title":"Transcriptional Elongation Factor ENL Phosphorylated by ATM Recruits Polycomb and Switches Off Transcription for DSB Repair","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":157,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"Ministry of Education, Culture, Sports, Science and Technology","keywords":"Biology; Ubiquitin ligase; Cell biology; Transcription factor; Ubiquitin; BMI1; Phosphorylation; Psychological repression; Transcription (linguistics); Repressor; Elongation factor; Molecular biology; Genetics; Gene; Gene expression; RNA; Ribosome","score_opus":0.020684837364524228,"score_gpt":0.24511477120785408,"score_spread":0.22442993384332985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060444223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93687564,0.018442502,0.0433833,0.0001504105,0.00015840189,0.00049978786,0.00010282879,0.0000308674,0.00035623994],"genre_scores_gemma":[0.99465865,0.0005538133,0.0024970153,0.00014807054,0.00006627242,0.00006103843,0.0010238076,0.000042438176,0.00094888324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988098,0.00006619746,0.00025870858,0.00043417994,0.00019898333,0.000232102],"domain_scores_gemma":[0.9993543,0.000009254614,0.000082687104,0.00021753529,0.00016881808,0.00016739217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023444706,0.00020266889,0.00015474421,0.00004121815,0.00006447723,0.000034013152,0.00008608261,0.00025094135,0.000008584319],"category_scores_gemma":[0.000046283,0.0002146251,0.00013629693,0.00007461648,0.000044417036,0.000009568088,0.000015249008,0.00007618153,0.0000034024747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014965801,0.00009298979,0.00062920357,0.000029420991,0.000039992552,9.0385447e-7,0.00020403901,0.000048026588,0.99528694,0.00003430092,0.0005578553,0.002926649],"study_design_scores_gemma":[0.0012986069,0.0005023026,0.00070340605,0.000007923657,0.000046296485,0.000001113625,0.000049216815,0.00053586735,0.9186278,0.00030956135,0.07766946,0.00024846228],"about_ca_topic_score_codex":0.000023880446,"about_ca_topic_score_gemma":0.000012422947,"teacher_disagreement_score":0.0771116,"about_ca_system_score_codex":0.000026306492,"about_ca_system_score_gemma":0.0000692315,"threshold_uncertainty_score":0.87521577},"labels":[],"label_agreement":null},{"id":"W2060446536","doi":"10.1016/j.molcel.2009.07.017","title":"Linking Cell Cycle to Histone Modifications: SBF and H2B Monoubiquitination Machinery and Cell-Cycle Regulation of H3K79 Dimethylation","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":181,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; Child and Family Research Institute; University of British Columbia","funders":"National Institute of General Medical Sciences; Deutscher Akademischer Austauschdienst","keywords":"Biology; Histone H2B; Cell cycle; Cell biology; Gene; Histone H3; Histone; Genetics","score_opus":0.006089623468074081,"score_gpt":0.24453357829294073,"score_spread":0.23844395482486666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060446536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91877776,0.004364902,0.07235103,0.00017689554,0.000041183463,0.00031805146,0.00000876563,0.000013456153,0.0039479434],"genre_scores_gemma":[0.9896759,0.00032524526,0.009289948,0.00011600195,0.000048638558,0.000011664489,0.00020737427,0.000023786912,0.00030144252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882334,0.000091620874,0.00032356274,0.00041247482,0.0001761109,0.00017287298],"domain_scores_gemma":[0.9992467,0.000016816652,0.00018700569,0.0003219773,0.00012897668,0.00009851025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026731714,0.00016968073,0.00015383134,0.00012832391,0.0000989933,0.000033026437,0.000085817905,0.00017077028,0.0000042646893],"category_scores_gemma":[0.000032528715,0.00019439866,0.000051615025,0.00014288041,0.000035233224,0.000012348814,0.000055267123,0.00007535994,0.0000024793235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028454933,0.00009080809,0.00032868353,0.000042918433,0.0000038663843,5.8685345e-7,0.00018476677,0.0066308407,0.98059934,0.00010725361,0.000015243446,0.011967236],"study_design_scores_gemma":[0.0004753038,0.0002938094,0.012309484,0.000013634027,0.000032230295,6.051914e-7,0.000026286814,0.006704186,0.9769636,0.0022069388,0.00076233916,0.0002115738],"about_ca_topic_score_codex":0.000028524164,"about_ca_topic_score_gemma":0.000004588675,"teacher_disagreement_score":0.07089813,"about_ca_system_score_codex":0.000021481917,"about_ca_system_score_gemma":0.0000253421,"threshold_uncertainty_score":0.79273474},"labels":[],"label_agreement":null},{"id":"W2060683701","doi":"10.1016/j.molcel.2009.07.008","title":"Loss of Human Ribosomal Gene CpG Methylation Enhances Cryptic RNA Polymerase II Transcription and Disrupts Ribosomal RNA Processing","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Ribosomal RNA; RNA polymerase I; Methylation; Molecular biology; Transcription (linguistics); RNA methylation; RNA-induced transcriptional silencing; RNA; Gene; Genetics; RNA-dependent RNA polymerase; Methyltransferase","score_opus":0.00810567742707429,"score_gpt":0.25485941900389586,"score_spread":0.24675374157682156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060683701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9633526,0.00976592,0.025318114,0.00009543263,0.00005288697,0.00020264034,0.000010360604,0.000014218041,0.0011878342],"genre_scores_gemma":[0.9971618,0.00024423405,0.0020704973,0.0000715293,0.0001070836,0.000010752523,0.00017112339,0.00002525627,0.00013770629],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859154,0.00009338539,0.00039433318,0.0004337529,0.00022451823,0.00026244225],"domain_scores_gemma":[0.9993433,0.000004586577,0.00021054667,0.00023354011,0.000102695274,0.00010533158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018301603,0.00022750048,0.00021318394,0.00008505212,0.0001920014,0.000036054473,0.00012361433,0.00019471793,0.000012016787],"category_scores_gemma":[0.000018461453,0.00023636324,0.00010892262,0.0001288976,0.00009121246,0.000014932623,0.000037022208,0.000094137074,0.0000010704132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048373593,0.00014108204,0.00022868361,0.000048391208,0.000015484184,0.0000077502,0.00015375801,0.000107699976,0.9869526,0.000078886515,0.0000028294012,0.0122144595],"study_design_scores_gemma":[0.0007060293,0.000832518,0.002350516,0.000023108129,0.00006486842,0.000002099313,0.0000222552,0.00023164385,0.99442524,0.00090747274,0.0001751636,0.0002590698],"about_ca_topic_score_codex":0.00001650597,"about_ca_topic_score_gemma":0.0000048403504,"teacher_disagreement_score":0.033809222,"about_ca_system_score_codex":0.0000114419745,"about_ca_system_score_gemma":0.00004079456,"threshold_uncertainty_score":0.9638613},"labels":[],"label_agreement":null},{"id":"W2060875411","doi":"10.1016/s1097-2765(02)00802-x","title":"Bre1, an E3 Ubiquitin Ligase Required for Recruitment and Substrate Selection of Rad6 at a Promoter","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":534,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute","keywords":"Biology; Chromatin; Histone H2A; Ubiquitin ligase; Histone methyltransferase; Chromatin immunoprecipitation; Ubiquitin; Histone; Histone code; Ring finger; Cell biology; Histone methylation; Genetics; DNA methylation; Gene; Promoter; Gene expression; Nucleosome","score_opus":0.030558039529071997,"score_gpt":0.2664141311659628,"score_spread":0.2358560916368908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060875411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99355406,0.0006314605,0.00262889,0.00004299869,0.000043269873,0.0010271107,0.000030394704,0.000012928863,0.0020289028],"genre_scores_gemma":[0.99443567,0.00005422781,0.0041356664,0.00015486678,0.000035857185,0.00016595909,0.00013321065,0.000036364137,0.0008481613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988798,0.0001340377,0.00021957427,0.00040524395,0.00009731634,0.00026401514],"domain_scores_gemma":[0.99942476,0.000006273212,0.000110992216,0.00025544237,0.00008562882,0.00011692046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029171538,0.00017358716,0.00015804412,0.000036409914,0.00008234821,0.000018240451,0.00008048754,0.00015927796,0.000029230392],"category_scores_gemma":[0.00003210885,0.00017689007,0.00008716336,0.00006254965,0.000051746196,0.0000047902317,0.0000375609,0.000049371112,0.0000027874084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014386447,0.00011093938,0.00024611547,0.000092094015,0.000023747454,0.0000047951557,0.000075874435,0.000009097409,0.9980682,0.00017189592,0.00011684497,0.00093654636],"study_design_scores_gemma":[0.0010411099,0.0011549278,0.00007317638,0.000012505652,0.000030668292,0.000025715204,0.000024016279,0.00006781454,0.97847337,0.00034414642,0.01855308,0.0001994579],"about_ca_topic_score_codex":0.0000063677207,"about_ca_topic_score_gemma":0.00001820664,"teacher_disagreement_score":0.019594803,"about_ca_system_score_codex":0.00001743282,"about_ca_system_score_gemma":0.000058697857,"threshold_uncertainty_score":0.7213368},"labels":[],"label_agreement":null},{"id":"W2062613923","doi":"10.1016/s1097-2765(01)00318-5","title":"The Structure of Calnexin, an ER Chaperone Involved in Quality Control of Protein Folding","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":390,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Calnexin; Biology; Chaperone (clinical); Protein folding; Protein quality; Protein stability; Cell biology; Computational biology; Co-chaperone; Folding (DSP implementation); Endoplasmic reticulum; Hsp90; Calreticulin; Genetics; Biochemistry; Heat shock protein; Gene","score_opus":0.014486245756399337,"score_gpt":0.2902232234680412,"score_spread":0.27573697771164185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062613923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99378574,0.0014521438,0.0035986153,0.00010580571,0.000017547338,0.0006814657,0.00001923347,0.0000038594258,0.0003356104],"genre_scores_gemma":[0.9993149,0.000039624876,0.0003792919,0.000053645166,0.000025285166,0.000021768914,0.000025350526,0.000023226154,0.0001169037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829334,0.00042930417,0.00037096321,0.00029017334,0.00029121607,0.000325028],"domain_scores_gemma":[0.999035,0.000018140458,0.00010477001,0.00061869144,0.00014131489,0.000082060185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005210268,0.00013607461,0.00021018817,0.000051169944,0.000047314352,0.000011433926,0.00034795288,0.00017766812,0.000021400932],"category_scores_gemma":[0.00019847938,0.00010757114,0.000078965284,0.00016460115,0.00013589514,0.0000041659328,0.00010087945,0.00016436026,9.604893e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024734248,0.00008600327,0.002313162,0.00004688661,0.000019049605,0.000009463142,0.00004564579,0.00012005033,0.995413,0.00015895469,0.000005227371,0.0015352168],"study_design_scores_gemma":[0.0010813766,0.00034998846,0.0009416223,0.00001465091,0.000004282347,0.0000010610166,0.00009409363,0.00018775594,0.9955278,0.00018867303,0.0014922678,0.00011642818],"about_ca_topic_score_codex":0.0003228403,"about_ca_topic_score_gemma":0.0004153005,"teacher_disagreement_score":0.005529185,"about_ca_system_score_codex":0.000018708175,"about_ca_system_score_gemma":0.000111617526,"threshold_uncertainty_score":0.43866238},"labels":[],"label_agreement":null},{"id":"W2063215680","doi":"10.1016/j.molcel.2013.05.007","title":"Alternative Splicing Regulates Biogenesis of miRNAs Located across Exon-Intron Junctions","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Tel Aviv University; Azrieli Foundation; Israel Science Foundation; Israel Cancer Association","keywords":"Biology; RNA splicing; Intron; Exon; microRNA; Biogenesis; Primary transcript; Alternative splicing; Genetics; RNA; Computational biology; Cell biology; Gene","score_opus":0.006210797053340999,"score_gpt":0.22934596889470024,"score_spread":0.22313517184135925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063215680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851685,0.00096669653,0.01283044,0.000056935274,0.0001239963,0.00033310652,0.00003894731,0.000018191575,0.00046316805],"genre_scores_gemma":[0.9977966,0.00003168086,0.0010437903,0.00008401007,0.000068929185,0.000041759282,0.00029861584,0.000040630195,0.00059400906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988675,0.00006674968,0.00026811627,0.0003667978,0.00015014764,0.0002806542],"domain_scores_gemma":[0.99901706,0.000006314103,0.00016677515,0.0004845494,0.0002297008,0.00009557143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008225891,0.0001864628,0.00015855736,0.000051275958,0.00006902559,0.000027310081,0.00019600219,0.0001397452,0.00008325739],"category_scores_gemma":[0.000028633292,0.00019111291,0.00015159744,0.0001597764,0.00010760745,0.0000069513703,0.00012905178,0.000050056253,0.000060941882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021510412,0.0000795883,0.0005773288,0.000035054545,0.000071780574,0.0000027608523,0.00004537851,0.0013032147,0.996043,0.000021743292,0.0010171144,0.000781504],"study_design_scores_gemma":[0.00043159348,0.00008595916,0.003053278,0.00001681652,0.000033831086,0.0000041152525,0.00006707088,0.00070472085,0.99330306,0.00012432685,0.0019786027,0.00019661064],"about_ca_topic_score_codex":0.00035331078,"about_ca_topic_score_gemma":0.000014059898,"teacher_disagreement_score":0.012628056,"about_ca_system_score_codex":0.000026196452,"about_ca_system_score_gemma":0.000038082704,"threshold_uncertainty_score":0.77933586},"labels":[],"label_agreement":null},{"id":"W2063756611","doi":"10.1016/j.molcel.2007.03.001","title":"PLU-1 Is an H3K4 Demethylase Involved in Transcriptional Repression and Breast Cancer Cell Proliferation","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":481,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health; Howard Hughes Medical Institute","keywords":"Biology; Psychological repression; Demethylase; Breast cancer; Cell growth; Cancer research; Cell biology; Cell; Cancer; Genetics; Gene; Gene expression; Epigenetics","score_opus":0.011002114926368546,"score_gpt":0.2596972282973028,"score_spread":0.24869511337093425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063756611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9809226,0.0062944894,0.011526343,0.00009896258,0.00006911159,0.00022858118,0.000028842214,0.000007914936,0.0008231489],"genre_scores_gemma":[0.9973005,0.00061245746,0.0013080699,0.00031154868,0.00009501287,0.00001945709,0.00016183771,0.000025730586,0.00016538924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883646,0.0000792899,0.00024795727,0.0004403923,0.0001700031,0.0002258998],"domain_scores_gemma":[0.99947417,0.0000054285097,0.000068542286,0.00024603118,0.00008151669,0.0001243142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003758359,0.00015413787,0.00010840963,0.000057033518,0.000056168432,0.000027491578,0.00008330634,0.00020375218,0.00004090194],"category_scores_gemma":[0.0000071105687,0.0001583681,0.000046987356,0.000085715306,0.000035013214,0.000011612318,0.000033151657,0.00009265222,0.0000013923094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011451316,0.00012988251,0.021952698,0.000026976464,0.0000051810975,0.000007494435,0.00018466453,0.00022450824,0.97315115,0.000013089214,0.00002432099,0.0041655395],"study_design_scores_gemma":[0.00081329205,0.00012504887,0.031964898,0.000010761017,0.000014237793,0.0000012670572,0.000095739764,0.00057116017,0.9644041,0.00013707495,0.0016638678,0.000198574],"about_ca_topic_score_codex":0.0002101713,"about_ca_topic_score_gemma":0.00067065336,"teacher_disagreement_score":0.01637789,"about_ca_system_score_codex":0.000025153853,"about_ca_system_score_gemma":0.000054413005,"threshold_uncertainty_score":0.6458064},"labels":[],"label_agreement":null},{"id":"W2064374160","doi":"10.1016/j.molcel.2013.12.029","title":"Chromatin Immunoprecipitation Indirect Peaks Highlight Long-Range Interactions of Insulator Proteins and Pol II Pausing","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"NHLBI Division of Intramural Research; National Institute of Environmental Health Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research; Centre National de la Recherche Scientifique; Institut National de la Santé et de la Recherche Médicale; National Institutes of Health; Agence Nationale de la Recherche","keywords":"Biology; Immunoprecipitation; Chromatin immunoprecipitation; Chromatin; Range (aeronautics); Cell biology; Genetics; DNA; Gene; Gene expression","score_opus":0.003544894041049782,"score_gpt":0.19932468849726817,"score_spread":0.19577979445621838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064374160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98672295,0.00046988105,0.010407294,0.000071694165,0.00009664178,0.00025419643,0.0000143835905,0.000011579684,0.001951392],"genre_scores_gemma":[0.99499357,0.000042078496,0.0044390606,0.00006733661,0.000047168167,0.000021036083,0.0001207792,0.00003236129,0.00023662519],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914294,0.00007323307,0.00025045886,0.00026149533,0.000104220155,0.00016766314],"domain_scores_gemma":[0.9993652,0.000008595524,0.00017465855,0.0003217041,0.00007353289,0.000056293728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013148396,0.00015699785,0.00016419082,0.000065702385,0.00010809042,0.000024406854,0.00012080288,0.00010736042,0.000010096594],"category_scores_gemma":[0.000039142178,0.00016321264,0.00007232997,0.00007511527,0.00005320874,0.0000054847324,0.00014934762,0.0000808689,0.0000035077123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015576563,0.00008002387,0.00051414024,0.000061771316,0.00003336176,0.0000015243951,0.00021030461,0.000099623,0.997629,0.00007406226,0.000025377498,0.0012552682],"study_design_scores_gemma":[0.0005913097,0.0003584708,0.00706148,0.00003756996,0.000038956183,0.000011320519,0.00004191123,0.0012869842,0.9873191,0.00011012502,0.0029128413,0.00022991783],"about_ca_topic_score_codex":0.000033769797,"about_ca_topic_score_gemma":0.000029991157,"teacher_disagreement_score":0.010309854,"about_ca_system_score_codex":0.000016643597,"about_ca_system_score_gemma":0.000031141477,"threshold_uncertainty_score":0.66556185},"labels":[],"label_agreement":null},{"id":"W2064604046","doi":"10.1016/s1097-2765(01)00384-7","title":"An Immediate Response of Ribosomal Transcription to Growth Factor Stimulation in Mammals Is Mediated by ERK Phosphorylation of UBF","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":242,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"National Institute of General Medical Sciences","keywords":"Biology; Transcription factor; Ribosome biogenesis; Activating transcription factor 2; Transcription (linguistics); Cell biology; General transcription factor; MAPK/ERK pathway; Ribosomal protein; Sp3 transcription factor; Ribosome; Molecular biology; Phosphorylation; Promoter; Genetics; Gene expression; RNA; Gene","score_opus":0.007933749966006343,"score_gpt":0.23119061708851282,"score_spread":0.22325686712250647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064604046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97665423,0.0003668576,0.022294201,0.00009950794,0.000044808803,0.0003600196,0.00010329967,0.0000069806065,0.0000700659],"genre_scores_gemma":[0.998389,0.000078754674,0.0010585361,0.00013479588,0.000014197827,0.000018410923,0.00021814929,0.000026624397,0.0000615197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998693,0.00025257908,0.00035383037,0.0003000016,0.00021391982,0.00018668274],"domain_scores_gemma":[0.9993873,0.000019981884,0.00013327248,0.00026923584,0.00010113554,0.000089070745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003101332,0.00015045943,0.00018683124,0.00011167393,0.000017380684,0.0000072759876,0.00014975714,0.00020401565,0.000067352215],"category_scores_gemma":[0.000079315694,0.00016183816,0.000078127436,0.00019725968,0.000024612687,0.00000921035,0.000016073005,0.000046258345,0.000006014231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015916973,0.00013643048,0.0022750567,0.000018241748,0.000010893595,0.0000045966653,0.0002498656,0.00018379875,0.9947774,0.0000070608844,0.00003423709,0.0007107445],"study_design_scores_gemma":[0.00071536744,0.0006836463,0.0077332277,0.000015630018,0.000012008441,7.5145675e-7,0.0000315026,0.00018989222,0.99005294,0.000070973096,0.00033335137,0.00016071035],"about_ca_topic_score_codex":0.0000691191,"about_ca_topic_score_gemma":0.0000071852705,"teacher_disagreement_score":0.021734752,"about_ca_system_score_codex":0.000015689004,"about_ca_system_score_gemma":0.00003711445,"threshold_uncertainty_score":0.6599569},"labels":[],"label_agreement":null},{"id":"W2064693320","doi":"10.1016/j.molcel.2007.11.033","title":"The Srs2 Helicase Activity Is Stimulated by Rad51 Filaments on dsDNA: Implications for Crossover Incidence during Mitotic Recombination","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":120,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; Ligue Contre le Cancer","keywords":"Helicase; Biology; RAD51; DNA; RNA Helicase A; Cell biology; Saccharomyces cerevisiae; Homologous recombination; Molecular biology; Genetics; Yeast; RNA; Gene","score_opus":0.010402862923993957,"score_gpt":0.2549211308044608,"score_spread":0.24451826788046688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064693320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933509,0.00021242033,0.004927148,0.00043345024,0.00010359376,0.0006028384,0.00006620138,0.000027428974,0.0002759681],"genre_scores_gemma":[0.9964689,0.00010450786,0.00035178792,0.0003891078,0.000024780064,0.00013847962,0.00010329257,0.000038779188,0.002380348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988499,0.0000629195,0.00017340152,0.0004611877,0.00014823397,0.00030435648],"domain_scores_gemma":[0.99903375,0.00003470568,0.00012004201,0.00062100036,0.00010742788,0.00008306659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010804191,0.00018079087,0.000110649795,0.000025939538,0.00045469106,0.000038546255,0.00025033182,0.00014482562,0.0000073262618],"category_scores_gemma":[0.00010205151,0.00016563741,0.00013334083,0.000096487405,0.00006058358,0.000007172676,0.00009891789,0.00009357977,0.00001863597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012133045,0.00014519668,0.00011442483,0.000012112874,0.000027384309,0.0000044867274,0.00002190548,0.00008898753,0.9965832,0.00002230703,0.0023436195,0.00051503856],"study_design_scores_gemma":[0.001027702,0.00024098688,0.0016285522,0.000006911301,0.000016965207,0.0000129209675,0.000004279296,0.00042752555,0.9922031,0.00020304233,0.0040379306,0.00019006469],"about_ca_topic_score_codex":0.000010066088,"about_ca_topic_score_gemma":0.0000022969484,"teacher_disagreement_score":0.00457536,"about_ca_system_score_codex":0.000057097193,"about_ca_system_score_gemma":0.000047687,"threshold_uncertainty_score":0.6754497},"labels":[],"label_agreement":null},{"id":"W2064773855","doi":"10.1016/j.molcel.2012.04.004","title":"Translational Homeostasis via the mRNA Cap-Binding Protein, eIF4E","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":184,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"EIF4E; Ubiquitin ligase; Biology; Repressor; Gene silencing; Gene knockdown; Cell biology; Translation (biology); EIF4EBP1; Ubiquitin; Messenger RNA; Biochemistry; Gene expression; Gene","score_opus":0.009856309353295706,"score_gpt":0.23276737069030695,"score_spread":0.22291106133701125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064773855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96541595,0.008013095,0.019295502,0.00037873327,0.00029480012,0.00042894523,0.000031894502,0.000024193723,0.0061169034],"genre_scores_gemma":[0.9968533,0.000025819554,0.0013343072,0.0003784623,0.00034302517,0.00007902155,0.00010749821,0.000049781684,0.0008287894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869853,0.00010260184,0.00019295319,0.0002860383,0.00027690426,0.0004429847],"domain_scores_gemma":[0.9992881,0.0000106674,0.00008415396,0.00043823966,0.000061669576,0.00011721328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028121698,0.00020065327,0.00011806362,0.000036147627,0.00013833588,0.000030575062,0.00029517463,0.00016076332,0.00012673429],"category_scores_gemma":[0.000021184302,0.00016675213,0.00015797815,0.00012323557,0.00008358841,0.000006801355,0.00006564,0.00015665228,0.00008057766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024790477,0.00005498468,0.0005923099,0.000018155835,0.000047278947,0.000004070685,0.00008400029,0.00008743253,0.9956946,0.00007185859,0.0008228101,0.0024977531],"study_design_scores_gemma":[0.00032156415,0.00006419585,0.000143507,0.000008732154,0.000032774613,0.000009973484,0.00002120988,0.00003160285,0.91491145,0.00006785907,0.08416103,0.00022610847],"about_ca_topic_score_codex":0.000015661206,"about_ca_topic_score_gemma":0.0000035570993,"teacher_disagreement_score":0.083338216,"about_ca_system_score_codex":0.000022296263,"about_ca_system_score_gemma":0.0000654854,"threshold_uncertainty_score":0.6799955},"labels":[],"label_agreement":null},{"id":"W2065292885","doi":"10.1016/j.molcel.2007.12.026","title":"Structure of a BCOR Corepressor Peptide in Complex with the BCL6 BTB Domain Dimer","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":168,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Biology; Corepressor; Dimer; Domain (mathematical analysis); Repressor; Genetics; Cell biology; Computational biology; Transcription factor; Gene; Physics","score_opus":0.019034127739812633,"score_gpt":0.2617822573779731,"score_spread":0.24274812963816048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065292885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98687845,0.00045229215,0.00012907921,0.0013195147,0.000010446933,0.00034187853,0.000020848916,0.000008309502,0.010839193],"genre_scores_gemma":[0.99559724,0.000029756615,0.0014169157,0.0007116722,0.000029629306,0.000006408289,0.000039197163,0.00001924459,0.0021499624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988569,0.00007380362,0.00016520712,0.00020209095,0.00044480214,0.0002571955],"domain_scores_gemma":[0.99943256,0.000047177175,0.00005324355,0.0003099536,0.00006966809,0.0000873789],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006263638,0.00013405466,0.00025729742,0.00006734404,0.00005846738,0.0000043467453,0.0001521758,0.000051333373,0.00035023622],"category_scores_gemma":[0.000010253711,0.00007396986,0.000080185324,0.00021581515,0.00029924625,0.000015328791,0.000068941416,0.00027233615,0.000016859429],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008305181,0.00014730616,0.039787587,0.00012413524,0.000058097143,0.0012182479,0.0007933482,0.0000867505,0.953239,0.00025724852,0.003304468,0.00015325511],"study_design_scores_gemma":[0.0049417815,0.0010390792,0.37080118,0.00011811947,0.00007796483,0.0005880597,0.00040980053,0.0004791184,0.5515156,0.00043900558,0.069207415,0.0003829256],"about_ca_topic_score_codex":0.00042483467,"about_ca_topic_score_gemma":0.00006872663,"teacher_disagreement_score":0.40172347,"about_ca_system_score_codex":0.000015809881,"about_ca_system_score_gemma":0.00007291681,"threshold_uncertainty_score":0.3834841},"labels":[],"label_agreement":null},{"id":"W2066006328","doi":"10.1016/j.molcel.2006.11.019","title":"The Arginine Methyltransferase CARM1 Regulates the Coupling of Transcription and mRNA Processing","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":381,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Institute of Environmental Health Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health","keywords":"Biology; Methyltransferase; Protein arginine methyltransferase 5; Arginine; Rna processing; Cell biology; Transcription (linguistics); Messenger RNA; Computational biology; Methylation; Molecular biology; Genetics; Gene; Amino acid","score_opus":0.004860848322027704,"score_gpt":0.22304023099526088,"score_spread":0.21817938267323317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066006328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9580237,0.018827539,0.02223026,0.00027925655,0.0000766104,0.00021692023,0.0000026143932,0.000008039306,0.00033502703],"genre_scores_gemma":[0.9989426,0.00047269647,0.00026872623,0.000049123508,0.00006710372,0.0000059303375,0.000023474013,0.000021793388,0.00014855654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992155,0.000022157548,0.00022141346,0.00020600931,0.00014479402,0.00019012706],"domain_scores_gemma":[0.9995404,0.000018297182,0.00007642752,0.00023968863,0.0000857382,0.000039453564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050663017,0.00011751893,0.00008994331,0.000025185134,0.00015717284,0.000024774894,0.00011304619,0.00010712357,0.000001641733],"category_scores_gemma":[0.000014688063,0.00008037556,0.00006991554,0.00011973687,0.00014810996,0.0000033558915,0.000018180373,0.000091264905,3.7917383e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008663399,0.000012649416,0.00006915982,0.000028872448,0.000022321125,0.000001312945,0.00011949953,0.0023229097,0.985287,0.000031727075,0.000025141457,0.011992759],"study_design_scores_gemma":[0.00037762197,0.000079051446,0.0006027429,0.000016224403,0.000052008298,0.000006746875,0.00012122274,0.0016509441,0.9919946,0.0000725075,0.0049273362,0.00009899546],"about_ca_topic_score_codex":0.000019266585,"about_ca_topic_score_gemma":0.00004355165,"teacher_disagreement_score":0.040918864,"about_ca_system_score_codex":0.000010639554,"about_ca_system_score_gemma":0.00003872815,"threshold_uncertainty_score":0.327762},"labels":[],"label_agreement":null},{"id":"W2066454074","doi":"10.1016/j.molcel.2011.05.032","title":"The TFIIH Subunit Tfb3 Regulates Cullin Neddylation","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Région Bretagne; Oncosuisse; Branco Weiss Fellowship – Society in Science; Institut National de la Santé et de la Recherche Médicale; Howard Hughes Medical Institute; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Cullin; Neddylation; NEDD8; Biology; Cell biology; Ubiquitin; Protein subunit; Ubiquitin ligase; COP9 signalosome; Biochemistry; Enzyme; Protease","score_opus":0.014334775563309926,"score_gpt":0.20523700813357165,"score_spread":0.19090223257026173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066454074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91710854,0.0031061522,0.0031932534,0.00009917487,0.00016418575,0.00029647647,0.000007177262,0.00003125684,0.0759938],"genre_scores_gemma":[0.9954793,0.00018329699,0.0010819351,0.000262415,0.000089022455,0.000030714975,0.000070614275,0.0000328613,0.0027698723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999061,0.00010361208,0.00016825311,0.0002675332,0.00012580238,0.00027380767],"domain_scores_gemma":[0.99926716,0.0000083906125,0.00007623352,0.00049766427,0.00007324467,0.0000772814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022624286,0.00015063198,0.00008128336,0.000022133572,0.00017531177,0.000033903183,0.00027126487,0.0001371448,0.0000749521],"category_scores_gemma":[0.000033453627,0.00011876622,0.00010600522,0.00008065522,0.00008544252,0.0000027974388,0.000100377554,0.000095482,0.00011884244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060234852,0.00004161991,0.00027305266,0.000010043885,0.00002218141,0.000010846958,0.00011451739,0.000011247146,0.9938572,0.0009001186,0.0011385021,0.0035604185],"study_design_scores_gemma":[0.00022612965,0.00014380892,0.0003027253,0.0000040895416,0.0000131245315,0.000004937269,0.00004465162,0.000055426037,0.91099626,0.0009437796,0.087106995,0.00015804863],"about_ca_topic_score_codex":0.000024919364,"about_ca_topic_score_gemma":0.000012168319,"teacher_disagreement_score":0.085968494,"about_ca_system_score_codex":0.000006959641,"about_ca_system_score_gemma":0.000038278366,"threshold_uncertainty_score":0.4843146},"labels":[],"label_agreement":null},{"id":"W2066589698","doi":"10.1016/j.molcel.2009.11.021","title":"SH3 Domains from a Subset of BAR Proteins Define a Ubl-Binding Domain and Implicate Parkin in Synaptic Ubiquitination","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":141,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Parkin; Ubiquitin; Ubiquitin ligase; Biology; Endocytic cycle; Ubiquitin-Protein Ligases; Cell biology; SH3 domain; Phosphorylation; Genetics; Parkinson's disease; Receptor; Endocytosis; Gene; Proto-oncogene tyrosine-protein kinase Src; Disease","score_opus":0.004988639970874678,"score_gpt":0.20210803333426344,"score_spread":0.19711939336338877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066589698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97134596,0.0010947239,0.026328767,0.00013850823,0.000016097736,0.00036137877,0.00003571167,0.000009257354,0.0006696214],"genre_scores_gemma":[0.99565685,0.0001025331,0.002085974,0.00009662143,0.0000230298,0.000020043482,0.0019755575,0.000018127077,0.000021249305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989174,0.000061177794,0.0002830006,0.0003742272,0.0001338363,0.00023033415],"domain_scores_gemma":[0.99952877,0.000005715606,0.00010020826,0.00026503866,0.000031798307,0.00006848263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001848636,0.00016670341,0.00019220033,0.00007984403,0.000033124204,0.000015231263,0.00011433991,0.00017227171,0.000014249786],"category_scores_gemma":[0.000011778618,0.00017845733,0.00007899009,0.00011408794,0.000047383983,0.000005037771,0.000027816795,0.00009492919,0.0000030307735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008897,0.00009681926,0.002490089,0.000023427812,0.000018080498,0.000039058395,0.00012155831,0.000019052124,0.99626344,0.0002771522,0.0000043988216,0.00055792806],"study_design_scores_gemma":[0.0014354113,0.0003705512,0.014017224,0.000038795188,0.00003666085,0.0000065356194,0.00006380524,0.0001188473,0.98041946,0.0016532537,0.001583232,0.0002562013],"about_ca_topic_score_codex":0.00007407412,"about_ca_topic_score_gemma":0.00008121143,"teacher_disagreement_score":0.02431093,"about_ca_system_score_codex":0.000016393358,"about_ca_system_score_gemma":0.000030281333,"threshold_uncertainty_score":0.72772783},"labels":[],"label_agreement":null},{"id":"W2067080454","doi":"10.1016/j.molcel.2013.04.025","title":"A Method for Systematic Mapping of Protein Lysine Methylation Identifies Functions for HP1β in DNA Damage Response","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Cancer Institute","keywords":"Biology; Interactome; Heterochromatin protein 1; Non-histone protein; EZH2; Methylation; DNA methylation; Histone; DNA; Heterochromatin; Lysine; Histone methylation; Histone methyltransferase; Protein methylation; DNA-PKcs; Biochemistry; Chromatin; Methyltransferase; Cell biology; DNA damage; Gene; Amino acid","score_opus":0.012373865314981936,"score_gpt":0.26919811221160056,"score_spread":0.25682424689661865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067080454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5145241,0.0005071882,0.48288393,0.00006810729,0.000026930202,0.0019030258,0.000012852898,0.0000043530413,0.0000694974],"genre_scores_gemma":[0.933939,0.000004723165,0.06316707,0.000025212681,0.000026661552,0.0013903675,0.0001495751,0.000031769447,0.0012656273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986269,0.00032403984,0.00045388367,0.00029421764,0.00011272767,0.00018823064],"domain_scores_gemma":[0.99903756,0.00010935413,0.00022341272,0.00033709145,0.0002524809,0.000040088325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011550551,0.0001400123,0.0002476282,0.00016447491,0.000049856037,0.000031267587,0.00011326917,0.00013979248,0.000006709172],"category_scores_gemma":[0.00046847507,0.00013880292,0.000160393,0.0001634603,0.00002144373,0.0000073677534,0.000040488492,0.00003995453,0.0000033675958],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105562474,0.00005280421,0.000027442335,0.0022179796,0.00003032025,3.4682205e-7,0.00008426526,0.0005778838,0.9966152,0.00003706355,0.000027459744,0.00022372535],"study_design_scores_gemma":[0.00072017737,0.00023501024,0.00037437168,0.00020792046,0.000038264374,2.414709e-7,0.00018571937,0.0048739817,0.9916347,0.0010447479,0.00053533184,0.0001495251],"about_ca_topic_score_codex":0.000033915767,"about_ca_topic_score_gemma":0.000014369469,"teacher_disagreement_score":0.41971686,"about_ca_system_score_codex":0.000018132838,"about_ca_system_score_gemma":0.000046747387,"threshold_uncertainty_score":0.56602186},"labels":[],"label_agreement":null},{"id":"W2067751798","doi":"10.1016/s1097-2765(01)00323-9","title":"Regulation of PTEN Transcription by p53","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":915,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada); University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"PTEN; Biology; Transactivation; Tumor suppressor gene; Suppressor; Cancer research; Transcription (linguistics); Transcription factor; PI3K/AKT/mTOR pathway; Protein kinase B; Mutant; Regulator; Gene; Cell biology; Carcinogenesis; Genetics; Signal transduction","score_opus":0.00562856139466506,"score_gpt":0.21390142520686967,"score_spread":0.2082728638122046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067751798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9368974,0.002213976,0.049491674,0.00010577237,0.0001324039,0.0001438706,0.00001716592,0.0000151091035,0.010982626],"genre_scores_gemma":[0.99710685,0.0001495932,0.00060934486,0.00019970912,0.00006043824,0.000010824041,0.0002019616,0.00002672113,0.001634536],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919516,0.000046989357,0.00018088303,0.00025484196,0.0001570935,0.00016505328],"domain_scores_gemma":[0.99949896,0.0000027214103,0.00007904847,0.00030256814,0.00006817432,0.00004852114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099164776,0.00011647886,0.000104868006,0.000030259343,0.000025168318,0.000008419097,0.00013585122,0.00014243557,0.00006996949],"category_scores_gemma":[0.000010116182,0.00012728006,0.00009819443,0.000091376256,0.00004497181,0.000003002274,0.000019370289,0.000052648254,0.000010463243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055018707,0.000050213857,0.0002319157,0.000016182583,0.000017521977,0.0000026970092,0.000020927748,0.00032897547,0.993542,0.000021086682,0.0035827043,0.0021307326],"study_design_scores_gemma":[0.00041740914,0.00013546171,0.00019063153,0.00000779627,0.000020504945,0.0000037736263,0.0000084321555,0.0001393638,0.9004328,0.000084648054,0.09843176,0.00012739057],"about_ca_topic_score_codex":0.000021374433,"about_ca_topic_score_gemma":0.0000031877992,"teacher_disagreement_score":0.09484906,"about_ca_system_score_codex":0.00001526565,"about_ca_system_score_gemma":0.00002769776,"threshold_uncertainty_score":0.519033},"labels":[],"label_agreement":null},{"id":"W2069200751","doi":"10.1016/s1097-2765(03)00091-1","title":"The Paf1 Complex Is Required for Histone H3 Methylation by COMPASS and Dot1p: Linking Transcriptional Elongation to Histone Methylation","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":713,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute","keywords":"Biology; Histone methylation; Histone methyltransferase; Histone code; Histone H3; Histone; EZH2; Compass; Methylation; Histone H2A; Cell biology; Genetics; DNA methylation; Nucleosome; DNA; Gene expression; Gene","score_opus":0.02069138108277099,"score_gpt":0.29031718319077404,"score_spread":0.2696258021080031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069200751","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4395584,0.008635042,0.548869,0.000906756,0.000189427,0.00069727295,0.00004976013,0.000015281066,0.001079045],"genre_scores_gemma":[0.9856006,0.00024424458,0.011868442,0.00048991,0.000060356026,0.00009136947,0.00083927874,0.00004145234,0.0007643287],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847853,0.00019935612,0.0003625989,0.0004465452,0.0002463711,0.0002665839],"domain_scores_gemma":[0.99917424,0.00005417299,0.00015498442,0.00029896552,0.00020745523,0.00011018707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065673847,0.00020413153,0.00016506814,0.000058719444,0.00037010666,0.00006905264,0.00011873846,0.00017163064,0.000010861173],"category_scores_gemma":[0.00008634224,0.00019628725,0.00010835681,0.00012797999,0.00006826521,0.000009402372,0.000023459423,0.00007892796,0.0000041122853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005927409,0.000037334084,0.00007726918,0.000021484992,0.000026891112,2.8922716e-7,0.00016127109,0.00034795518,0.99235916,0.00096105464,0.00096389157,0.004984147],"study_design_scores_gemma":[0.0006256718,0.00017772545,0.0003737724,0.0000048529178,0.000037270966,6.8964266e-7,0.00003058406,0.0008473711,0.7274401,0.0015814623,0.26867905,0.00020143275],"about_ca_topic_score_codex":0.000017159202,"about_ca_topic_score_gemma":0.000018641418,"teacher_disagreement_score":0.5460422,"about_ca_system_score_codex":0.000059491504,"about_ca_system_score_gemma":0.000044615634,"threshold_uncertainty_score":0.8004362},"labels":[],"label_agreement":null},{"id":"W2069309708","doi":"10.1016/j.molcel.2004.11.033","title":"Proteasome Involvement in the Repair of DNA Double-Strand Breaks","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":230,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Biology; Proteasome; Homologous recombination; Non-homologous end joining; DNA repair; Cell biology; DNA damage; Protein subunit; DNA; Rad50; DNA repair protein XRCC4; BRCA2 Protein; Gene; Molecular biology; Genetics; DNA-binding protein; Mutation; DNA mismatch repair; Transcription factor","score_opus":0.008706922425533779,"score_gpt":0.22040994839541406,"score_spread":0.21170302596988028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069309708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99228626,0.0005209555,0.0015759754,0.0001029694,0.00004776228,0.0006833735,0.000005351669,0.000016485628,0.0047608335],"genre_scores_gemma":[0.9979165,0.000022258024,0.0013392813,0.00040746803,0.000027836708,0.00008522275,0.000040413684,0.000021990212,0.00013899848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989148,0.000065158165,0.0002391817,0.00031537362,0.00023312223,0.00023237006],"domain_scores_gemma":[0.9992426,0.0000028959448,0.000075818556,0.0005962223,0.00003904389,0.000043435128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033205913,0.00015079544,0.00013276978,0.00004268856,0.000025617215,0.000011134991,0.00029502326,0.00012378187,0.000008147651],"category_scores_gemma":[0.000009530337,0.00012149449,0.00016148711,0.00012579856,0.000053439875,0.0000025769261,0.00008220934,0.00009635241,0.0000072370112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007799624,0.00023980747,0.00021862886,0.00005267989,0.000020103364,0.000048435162,0.00016592546,0.00036268338,0.9979559,0.0007314787,0.000054652784,0.00007169824],"study_design_scores_gemma":[0.0019749578,0.00035383506,0.00025539295,0.000019929264,0.000016449552,0.0000072036423,0.00013103698,0.000007494851,0.99275595,0.0006324185,0.003703305,0.00014202979],"about_ca_topic_score_codex":0.00008497179,"about_ca_topic_score_gemma":0.000052178868,"teacher_disagreement_score":0.0056302375,"about_ca_system_score_codex":0.000018371802,"about_ca_system_score_gemma":0.00008124704,"threshold_uncertainty_score":0.49544016},"labels":[],"label_agreement":null},{"id":"W2071172673","doi":"10.1016/s1097-2765(03)00393-9","title":"Photo-Induced Peptide Cleavage in the Green-to-Red Conversion of a Fluorescent Protein","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":276,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Core Research for Evolutional Science and Technology; Cancer Research Society; Canadian Institutes of Health Research; Japan Science and Technology Agency; Ministry of Education, Science and Technology; Human Frontier Science Program","keywords":"Green fluorescent protein; Chromophore; Tripeptide; Fluorescence; Aequorea victoria; Biology; Peptide bond; mCherry; Peptide; Biophysics; Biochemistry; Photochemistry; Chemistry","score_opus":0.007024170931131715,"score_gpt":0.24146836050125703,"score_spread":0.2344441895701253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071172673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98215115,0.00016033936,0.013575972,0.000088159075,0.000027700386,0.0010908076,0.000006165717,0.000014772663,0.0028849072],"genre_scores_gemma":[0.9832389,0.000012840853,0.015944509,0.00051874266,0.000010142328,0.00008061405,0.000018750541,0.00003061281,0.00014490321],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986995,0.00019410142,0.00024330177,0.00037141173,0.00019439585,0.00029732875],"domain_scores_gemma":[0.99919677,0.000005457074,0.00008731957,0.00059458317,0.00005400661,0.0000618582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027248537,0.00018715701,0.00015932044,0.00007254055,0.000036061647,0.0000101703845,0.00036174824,0.0001388572,0.00001142922],"category_scores_gemma":[0.00006867394,0.00016048654,0.00009407538,0.00021882408,0.000056558365,0.0000034377526,0.00008580338,0.00014799097,0.000009837582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065174194,0.0001221977,0.00024795675,0.000041285104,0.0000049768482,0.000030432748,0.00014731234,0.000011596415,0.9987629,0.000042755222,0.00038842438,0.00013497708],"study_design_scores_gemma":[0.00045723695,0.0003820033,0.00013506181,0.00003567648,0.0000058198552,0.0000042669494,0.00016826464,0.000007754962,0.9907983,0.000057593443,0.0077676694,0.00018038065],"about_ca_topic_score_codex":0.000063676984,"about_ca_topic_score_gemma":0.000012750483,"teacher_disagreement_score":0.00796464,"about_ca_system_score_codex":0.000025100393,"about_ca_system_score_gemma":0.000054215856,"threshold_uncertainty_score":0.6544451},"labels":[],"label_agreement":null},{"id":"W2071189887","doi":"10.1016/j.molcel.2006.08.009","title":"A Recurrent Phospho-Sumoyl Switch in Transcriptional Repression and Beyond","year":2006,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Cancer Institute","keywords":"SUMO protein; Biology; Phosphorylation; Psychological repression; In silico; Cell biology; Myogenesis; Acetylation; Signal transduction; Transcriptional regulation; Sequence motif; Computational biology; Genetics; Transcription factor; Gene; Gene expression; Myocyte; Ubiquitin","score_opus":0.017748948898284926,"score_gpt":0.27367664511737877,"score_spread":0.25592769621909384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071189887","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012247645,0.9877259,0.0002783577,0.000013460686,0.00014963854,0.0007018599,0.00009466766,0.00001211258,0.009799245],"genre_scores_gemma":[0.0009286956,0.9959408,0.000680316,0.00007934858,0.00011237142,0.0001931715,0.0013261538,0.000076195276,0.00066291745],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997953,0.00019900619,0.00048640586,0.0008152186,0.00020281428,0.00034353381],"domain_scores_gemma":[0.99921656,0.000010855165,0.00017541868,0.00045891217,0.000031962998,0.00010631722],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002346317,0.00044638372,0.00067262835,0.00011185589,0.000047549405,0.000037761623,0.00023502368,0.00055622665,0.000028653692],"category_scores_gemma":[0.000017589244,0.00041173922,0.00034237845,0.00014676419,0.000056920282,0.0000025814022,0.00013373904,0.00035868923,0.000015377951],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046757646,0.00029031376,0.000014475352,0.0075597437,0.000057557274,0.00015792715,0.000037828137,0.0000034195575,0.036286548,0.00019862306,0.0017000174,0.9536468],"study_design_scores_gemma":[0.00041813048,0.00013353553,0.000004315681,0.001198752,0.000112820686,0.00003398149,0.0000055109135,0.0000036498877,0.010716715,0.00013514193,0.98676735,0.00047010105],"about_ca_topic_score_codex":0.000020260979,"about_ca_topic_score_gemma":0.0000152289385,"teacher_disagreement_score":0.9850673,"about_ca_system_score_codex":0.000030252413,"about_ca_system_score_gemma":0.00016217322,"threshold_uncertainty_score":0.99983346},"labels":[],"label_agreement":null},{"id":"W2071760372","doi":"10.1016/s1097-2765(03)00490-8","title":"Regulation of NF-κB Signaling by Pin1-Dependent Prolyl Isomerization and Ubiquitin-Mediated Proteolysis of p65/RelA","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":634,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Cancer Institute","keywords":"Ubiquitin; PIN1; Ubiquitin ligase; Biology; Proteolysis; NF-κB; Transcription factor; Signal transduction; Cell biology; NFKB1; Cytokine; Proteasome; Protein subunit; Peptidylprolyl isomerase; Biochemistry; Gene; Isomerase; Immunology; Enzyme","score_opus":0.003725735746048316,"score_gpt":0.1919861844017028,"score_spread":0.18826044865565447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071760372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853728,0.0015251811,0.012123851,0.000015185225,0.00002537968,0.00040342295,0.000027183156,0.0000067858737,0.00050021504],"genre_scores_gemma":[0.9984798,0.000030547308,0.0010847894,0.00003987002,0.000008228977,0.000034742974,0.00020375846,0.000027123118,0.000091170834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988337,0.00014881098,0.0003417765,0.0003149106,0.0001993336,0.00016142399],"domain_scores_gemma":[0.999356,0.000012494337,0.00021476814,0.00026027224,0.00009723575,0.00005923544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002456619,0.00013888294,0.00017442099,0.00006626511,0.000020566707,0.0000074414966,0.00008999079,0.00014537579,0.00002138616],"category_scores_gemma":[0.00017263378,0.00015392547,0.000060943697,0.00016987884,0.000066202,0.0000042028455,0.000036458685,0.000057642017,0.0000010914868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005279918,0.00013631787,0.0031538035,0.000109385524,0.000022333928,0.0000031149011,0.00005845807,0.0011082327,0.99513423,0.00004108713,0.000022405127,0.0001578105],"study_design_scores_gemma":[0.0007833083,0.00014230276,0.00017037084,0.000032281907,0.000032943357,0.0000013930425,0.000039516937,0.00021436668,0.9981507,0.00011451333,0.00017274561,0.00014553872],"about_ca_topic_score_codex":0.000011449531,"about_ca_topic_score_gemma":0.0000013182532,"teacher_disagreement_score":0.013106973,"about_ca_system_score_codex":0.000010873455,"about_ca_system_score_gemma":0.00006367655,"threshold_uncertainty_score":0.62768984},"labels":[],"label_agreement":null},{"id":"W2072470582","doi":"10.1016/j.molcel.2012.08.004","title":"LIN28 Binds Messenger RNAs at GGAGA Motifs and Regulates Splicing Factor Abundance","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":278,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institute of Neurological Disorders and Stroke; National Human Genome Research Institute; University of California, San Diego; National Science Foundation","keywords":"LIN28; Biology; microRNA; RNA-binding protein; RNA splicing; Reprogramming; Cold-shock domain; Cell biology; Exoribonuclease; Messenger RNA; Alternative splicing; Embryonic stem cell; Gene knockdown; Translation (biology); Somatic cell; Induced pluripotent stem cell; RNA; Genetics; Gene","score_opus":0.008842755869137074,"score_gpt":0.24121230186781897,"score_spread":0.2323695459986819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072470582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898758,0.007320626,0.0008207075,0.00010644358,0.00008792428,0.0001641019,0.000010962668,0.000017703887,0.0015957394],"genre_scores_gemma":[0.9903322,0.00031143197,0.00066604227,0.00022590028,0.00016128873,0.000011908483,0.00005026913,0.000047942518,0.008193027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855965,0.00007274438,0.00017416793,0.00036857152,0.00021057522,0.0006142872],"domain_scores_gemma":[0.99914044,0.000014735769,0.00006255098,0.00042782706,0.000053212807,0.00030125908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018503709,0.00021425151,0.00016984782,0.000053931046,0.00014528826,0.000042731113,0.00016736347,0.00017434946,0.000055388417],"category_scores_gemma":[0.000049322156,0.00019947381,0.00009173827,0.00008800476,0.000086776054,0.000009464973,0.000277309,0.00013984107,0.000046618057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031670977,0.000041273142,0.006108595,0.000041265946,0.000028821354,0.000012144128,0.00007252401,0.000027276272,0.991877,0.000019073885,0.0005718513,0.0011685042],"study_design_scores_gemma":[0.0003902615,0.00009909832,0.004788557,0.000013830391,0.000011675327,0.000017684872,0.000028616647,0.00017938466,0.968133,0.000008074479,0.026087847,0.00024201293],"about_ca_topic_score_codex":0.000027758939,"about_ca_topic_score_gemma":0.000008975817,"teacher_disagreement_score":0.025515996,"about_ca_system_score_codex":0.000028770726,"about_ca_system_score_gemma":0.000026538059,"threshold_uncertainty_score":0.8134306},"labels":[],"label_agreement":null},{"id":"W2073568663","doi":"10.1016/j.molcel.2014.12.038","title":"Error-Free DNA Damage Tolerance and Sister Chromatid Proximity during DNA Replication Rely on the Polα/Primase/Ctf4 Complex","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fondazione Italiana per la Ricerca sul Cancro; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Universität Zürich; Ryerson University","keywords":"Biology; Establishment of sister chromatid cohesion; Replisome; DNA replication; Genetics; Sister chromatids; Chromatid; Cell biology; Primase; DNA damage; DNA; Eukaryotic DNA replication; Chromosome; Gene; Polymerase chain reaction","score_opus":0.023785036767346415,"score_gpt":0.23907452650005295,"score_spread":0.21528948973270653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073568663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98692256,0.0002225223,0.00089957897,0.0009082277,0.000061938204,0.000505429,0.000021176698,0.000046462523,0.0104120895],"genre_scores_gemma":[0.9957394,0.000011888601,0.0018347269,0.0011797318,0.00007153354,0.000062263614,0.00009869408,0.000048680322,0.000953077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984268,0.0001631207,0.00022666356,0.00063936604,0.00026056627,0.0002835055],"domain_scores_gemma":[0.9977997,0.00001031429,0.00013337425,0.0018364482,0.00008084305,0.00013931139],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003446064,0.00023097979,0.00016400438,0.000030694337,0.000116126044,0.000053783668,0.00042163738,0.00014363756,0.000015386662],"category_scores_gemma":[0.00015758541,0.00019408595,0.00007818894,0.00008434566,0.00009368139,0.0000084409585,0.0003252731,0.00013590262,0.000030263282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074941025,0.00007171699,0.00006530369,0.000037072023,0.000016872871,0.000017103534,0.00007407723,0.000040748317,0.99768823,0.00027238176,0.0015273916,0.000114177725],"study_design_scores_gemma":[0.000833417,0.00024175401,0.001607263,0.000017674827,0.000020045392,0.000017288843,0.000053774234,0.0004821615,0.9864571,0.0003665685,0.0096555315,0.00024741696],"about_ca_topic_score_codex":0.000011728292,"about_ca_topic_score_gemma":0.000008474448,"teacher_disagreement_score":0.011231109,"about_ca_system_score_codex":0.00003582261,"about_ca_system_score_gemma":0.00004601848,"threshold_uncertainty_score":0.79145956},"labels":[],"label_agreement":null},{"id":"W2073771642","doi":"10.1016/j.molcel.2014.08.015","title":"New pROSpects for PTP1B: micro-Managing Oncogene-Induced Senescence","year":2014,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"","keywords":"Biology; Senescence; Oncogene; Cell biology; Cellular senescence; Computational biology; Genetics; Cell; Cell cycle; Gene; Phenotype","score_opus":0.010254969489156827,"score_gpt":0.23329556639445387,"score_spread":0.22304059690529704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073771642","genre_codex":"methods","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004459544,0.07146395,0.6069293,0.29689205,0.0029921157,0.009352788,0.0006198408,0.00036282287,0.0069275843],"genre_scores_gemma":[0.030556208,0.00026040105,0.06319392,0.8697733,0.010527792,0.0006440701,0.0096884,0.0008588298,0.014497043],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99698424,0.000096907395,0.00040346888,0.0013277256,0.0003314351,0.000856223],"domain_scores_gemma":[0.99794,0.000022228895,0.0003294372,0.0013939219,0.00015175832,0.00016265888],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000168645,0.00069767074,0.000500316,0.00010123314,0.00011549122,0.000116684736,0.000885204,0.001041904,0.00001919875],"category_scores_gemma":[0.00008759083,0.0007654646,0.00042839817,0.00012426738,0.000050434614,0.0000042071656,0.00031486477,0.00056053104,0.00007281424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024092475,0.000011477026,0.0000051376496,0.00023867843,0.000046374305,0.00012049423,0.0000036257427,0.0000068973036,0.54098845,0.000021886573,0.45748493,0.0010479647],"study_design_scores_gemma":[0.0004777088,0.00020283085,7.612448e-7,0.000050095332,0.00006909786,0.000017921462,8.8489844e-7,0.000008531655,0.5274894,0.0001671683,0.4710297,0.00048590283],"about_ca_topic_score_codex":0.000075072974,"about_ca_topic_score_gemma":0.000005778022,"teacher_disagreement_score":0.5728813,"about_ca_system_score_codex":0.00005574945,"about_ca_system_score_gemma":0.00035355258,"threshold_uncertainty_score":0.99947965},"labels":[],"label_agreement":null},{"id":"W2074194066","doi":"10.1016/j.molcel.2013.02.023","title":"The Decapping Scavenger Enzyme DCS-1 Controls MicroRNA Levels in Caenorhabditis elegans","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec","funders":"National Center for Research Resources; National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institute on Aging; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Biology; Caenorhabditis elegans; microRNA; Cell biology; Scavenger; RNA interference; Transcription factor; Gene; Genetics; RNA; Biochemistry","score_opus":0.005808278091949481,"score_gpt":0.2087791010911617,"score_spread":0.20297082299921224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074194066","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869803,0.005276151,0.003993157,0.0004693704,0.00011857573,0.0006192303,0.000015564721,0.000015201843,0.002512426],"genre_scores_gemma":[0.9979291,0.000060260463,0.0004067915,0.0005005055,0.00009751665,0.00011034355,0.00006203032,0.00004336754,0.0007900986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856925,0.00014482852,0.00030072933,0.0003846026,0.00015846247,0.00044213058],"domain_scores_gemma":[0.99911904,0.000024150455,0.00010600132,0.00053937006,0.00010279075,0.00010861773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018942176,0.00020800743,0.00015058779,0.000048219183,0.00011384331,0.000102187994,0.00031078776,0.00016608287,0.000064039596],"category_scores_gemma":[0.00006154383,0.00018144232,0.00013411757,0.00011590185,0.0000898282,0.000007632725,0.0001087775,0.00012420685,0.00012615148],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011217991,0.000037981958,0.000380469,0.000012266643,0.000026569767,0.0000149585885,0.000025146554,0.00016452454,0.99600595,0.000050003244,0.0017452491,0.00152565],"study_design_scores_gemma":[0.00081444025,0.00004563295,0.008308776,0.000016889882,0.000015499547,0.000009020617,0.00003937439,0.00025710848,0.94014764,0.00021993084,0.049866397,0.000259282],"about_ca_topic_score_codex":0.00009300219,"about_ca_topic_score_gemma":0.00005886214,"teacher_disagreement_score":0.055858314,"about_ca_system_score_codex":0.000042369706,"about_ca_system_score_gemma":0.00008155857,"threshold_uncertainty_score":0.7399003},"labels":[],"label_agreement":null},{"id":"W2074405508","doi":"10.1016/s1097-2765(04)00003-6","title":"High-Definition Macromolecular Composition of Yeast RNA-Processing Complexes","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":378,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Biology; RNA; Yeast; Composition (language); Rna processing; Computational biology; Cell biology; Genetics; Gene","score_opus":0.009692196582533678,"score_gpt":0.21272935643493393,"score_spread":0.20303715985240026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074405508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81911194,0.00087539526,0.17750381,0.000076098644,0.00006755832,0.00017336886,0.000027027989,0.00001871404,0.0021460645],"genre_scores_gemma":[0.9742736,0.000039273848,0.025058579,0.00024001124,0.000052528525,0.000018016653,0.00024998694,0.000040106337,0.00002785937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989061,0.000070089256,0.000254422,0.00032705677,0.00021480257,0.00022756791],"domain_scores_gemma":[0.9993564,0.0000025216407,0.00015223245,0.00032443702,0.000092444,0.00007195695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011492818,0.0001880292,0.00019070381,0.000058565358,0.00007997226,0.000026411453,0.00018994037,0.00015061906,0.00002687375],"category_scores_gemma":[0.00000955952,0.00020225359,0.00013486296,0.00010320869,0.00007537149,0.0000051944717,0.0000706493,0.00006610614,0.000025487412],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051550942,0.00011614173,0.0000050224367,0.00006301859,0.000018851073,0.000027269145,0.00003074911,0.00054916134,0.9960662,0.0015129764,0.00001674777,0.0015422939],"study_design_scores_gemma":[0.0007660488,0.0002388057,0.000058502523,0.00005488964,0.000034127577,0.000015685533,0.000024723953,0.0000066197126,0.9942583,0.0039665094,0.00035295307,0.00022286605],"about_ca_topic_score_codex":0.000049151324,"about_ca_topic_score_gemma":0.0000024612214,"teacher_disagreement_score":0.15516168,"about_ca_system_score_codex":0.000016743092,"about_ca_system_score_gemma":0.000055464872,"threshold_uncertainty_score":0.8247662},"labels":[],"label_agreement":null},{"id":"W2075205928","doi":"10.1016/s1097-2765(02)00561-0","title":"Dual Regulation of the Met4 Transcription Factor by Ubiquitin-Dependent Degradation and Inhibition of Promoter Recruitment","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":121,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"Biology; Ubiquitin; Transcription factor; Degradation (telecommunications); Transcription (linguistics); Promoter; Cell biology; Dual (grammatical number); Genetics; Gene; Gene expression","score_opus":0.026847416825304272,"score_gpt":0.22355250984447494,"score_spread":0.19670509301917066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075205928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940548,0.00088225235,0.0033701807,0.00013426116,0.000044921326,0.0005775575,0.00006652243,0.0000048639536,0.00086466066],"genre_scores_gemma":[0.9987894,0.00008255189,0.00034580127,0.0000572657,0.000017417024,0.000031961605,0.000102989616,0.000013646191,0.0005589259],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991787,0.00011972138,0.00021792992,0.00019918424,0.00017928515,0.00010519221],"domain_scores_gemma":[0.99956095,0.0000033712388,0.00014588142,0.00020374176,0.00005516693,0.00003088428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010687851,0.00010599006,0.000098355245,0.000024308605,0.000035440138,0.000008404109,0.000050369526,0.00010933809,0.00006372925],"category_scores_gemma":[0.000011734572,0.00008773433,0.00007115551,0.00004691322,0.000052415897,0.000005804775,0.000032354244,0.000052170446,0.0000014693145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017911321,0.00008384384,0.00009688135,0.000054923552,0.000012713556,3.4580916e-7,0.00013966685,0.0000074062473,0.9958052,0.00004692144,0.00014744914,0.0035867204],"study_design_scores_gemma":[0.00047004904,0.0002190699,0.00042576116,0.00002042037,0.000023872626,0.0000030425042,0.000024377392,0.000094261675,0.99669915,0.000091614704,0.001838539,0.00008982966],"about_ca_topic_score_codex":0.000008732693,"about_ca_topic_score_gemma":0.0000030412623,"teacher_disagreement_score":0.004734661,"about_ca_system_score_codex":0.000010665678,"about_ca_system_score_gemma":0.000008705395,"threshold_uncertainty_score":0.3577702},"labels":[],"label_agreement":null},{"id":"W2075250295","doi":"10.1016/s1097-2765(02)00546-4","title":"Efficient Supercoiling of DNA by a Single Condensin Complex as Revealed by Electron Spectroscopic Imaging","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":113,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Condensin; DNA supercoil; Biology; DNA; Chromatin; Nucleoid; Biophysics; DNA condensation; Cell biology; Mitosis; Genetics; DNA replication; Gene","score_opus":0.004599750071470177,"score_gpt":0.19752140289519,"score_spread":0.1929216528237198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075250295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987566,0.0034912508,0.0024020763,0.00012893775,0.000041468356,0.00017525918,0.000029309029,0.000012452926,0.0061532618],"genre_scores_gemma":[0.99756545,0.00006231652,0.00091376324,0.00030176842,0.00002012501,0.0000045410657,0.00021936857,0.000043798347,0.0008688765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987572,0.000055525354,0.000275919,0.00038523588,0.00015926432,0.00036689814],"domain_scores_gemma":[0.9993675,0.0000063727944,0.00010540372,0.00037924259,0.00005867896,0.00008285206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000069920905,0.00020388605,0.00020680077,0.000032798536,0.00005756943,0.00002654644,0.00020019904,0.000089909154,0.00007998269],"category_scores_gemma":[0.000017632632,0.00022952596,0.00011326984,0.000082030696,0.000076635515,0.0000011483781,0.000083349114,0.000091796115,0.000023989285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009172124,0.0002062683,0.0001511146,0.000027570617,0.000018706665,0.000008935686,0.000042195294,0.00018517696,0.9956672,0.000018089115,0.0035794745,0.00008606363],"study_design_scores_gemma":[0.0006656633,0.00024945426,0.000015822598,0.000008453372,0.000024130552,0.000015464844,0.00004454598,0.010512177,0.9833652,0.000025480294,0.0048415423,0.00023211223],"about_ca_topic_score_codex":0.000024236126,"about_ca_topic_score_gemma":0.0000021657793,"teacher_disagreement_score":0.012302079,"about_ca_system_score_codex":0.00003922785,"about_ca_system_score_gemma":0.000019859119,"threshold_uncertainty_score":0.9359797},"labels":[],"label_agreement":null},{"id":"W2076784787","doi":"10.1016/s1097-2765(01)00167-8","title":"A Conserved HEAT Domain within eIF4G Directs Assembly of the Translation Initiation Machinery","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":215,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; McGill University","keywords":"Biology; EIF4G; Internal ribosome entry site; Eukaryotic translation; Translation (biology); RNA Helicase A; RNA; Helicase; Cell biology; Initiation factor; Ribosome; Genetics; Messenger RNA; Gene","score_opus":0.01167170669846909,"score_gpt":0.21936287460243314,"score_spread":0.20769116790396405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076784787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97097576,0.0010136744,0.020515887,0.00026684545,0.00012007084,0.00029337715,0.000007067508,0.000010419706,0.0067968937],"genre_scores_gemma":[0.99710035,0.000049499315,0.0021653958,0.0003612873,0.00003562988,0.000022248993,0.00003693681,0.000023186865,0.00020543861],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899536,0.00024875312,0.0002176054,0.00022122136,0.00017008359,0.00014697439],"domain_scores_gemma":[0.9994584,0.000013333889,0.00009167323,0.00035159412,0.000044964974,0.00004006918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025687617,0.00013266677,0.000122021505,0.000028445991,0.00006224301,0.000014255714,0.00017198687,0.00013994763,0.000016244468],"category_scores_gemma":[0.000031415013,0.000105841835,0.0001355685,0.00011747106,0.00003681045,0.000003709782,0.000034118366,0.00006161327,0.000004408546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006863359,0.000045654873,0.0004431931,0.000018448854,0.000017479213,0.000006404714,0.00006676886,0.00019670161,0.99824846,0.000106493346,0.000036807684,0.0007449436],"study_design_scores_gemma":[0.00046046995,0.00009448841,0.00029717927,0.000019029027,0.0000222348,0.000009838071,0.000025022146,0.00013597817,0.9956008,0.00046823468,0.0027379037,0.00012882255],"about_ca_topic_score_codex":0.00003144338,"about_ca_topic_score_gemma":0.000025344956,"teacher_disagreement_score":0.026124613,"about_ca_system_score_codex":0.000006972401,"about_ca_system_score_gemma":0.000049971215,"threshold_uncertainty_score":0.4316105},"labels":[],"label_agreement":null},{"id":"W2077457197","doi":"10.1016/j.molcel.2014.03.002","title":"Autodeubiquitination Protects the Tumor Suppressor BAP1 from Cytoplasmic Sequestration Mediated by the Atypical Ubiquitin Ligase UBE2O","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":211,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biology; Ubiquitin ligase; Ubiquitin; Chromatin; Cell biology; Deubiquitinating enzyme; BAP1; Cytoplasm; Nuclear localization sequence; Suppressor; Chromatin remodeling; Cancer research; Genetics; Cancer; Gene","score_opus":0.006121761129171392,"score_gpt":0.2072449213226127,"score_spread":0.2011231601934413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077457197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98276174,0.00046487956,0.010319032,0.0017462955,0.0001428432,0.00094479753,0.00013008679,0.000058774254,0.0034315689],"genre_scores_gemma":[0.9953876,0.000014581703,0.00035211927,0.002297009,0.00029455338,0.00028335757,0.0009724283,0.00005149272,0.00034686114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99783665,0.00060776004,0.00031117236,0.0005151593,0.00033821756,0.00039104256],"domain_scores_gemma":[0.998823,0.00009138,0.00018034667,0.0006821022,0.000109250504,0.000113935545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005573655,0.00028244406,0.00017181928,0.000024518093,0.00025672748,0.000120387136,0.00051167555,0.00021360515,0.000072062176],"category_scores_gemma":[0.00032706314,0.0001921374,0.00013019874,0.000117243064,0.00015713567,0.000008801253,0.00015483412,0.0003093993,0.00009943468],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008615896,0.0000636026,0.000050368875,0.000017294718,0.00002162671,0.000007191696,0.00008764306,0.000048218775,0.99532706,0.00029650383,0.0033710469,0.00062331016],"study_design_scores_gemma":[0.00064080773,0.00026528648,0.00018183449,0.00001555271,0.00003037062,0.000009378647,0.000041528103,0.0019643975,0.9440198,0.0006128519,0.05196947,0.00024873167],"about_ca_topic_score_codex":0.00006190185,"about_ca_topic_score_gemma":0.000023173658,"teacher_disagreement_score":0.051307242,"about_ca_system_score_codex":0.00002373196,"about_ca_system_score_gemma":0.00009374136,"threshold_uncertainty_score":0.7835136},"labels":[],"label_agreement":null},{"id":"W2077845478","doi":"10.1016/j.molcel.2014.05.004","title":"A Pair of RNA-Binding Proteins Controls Networks of Splicing Events Contributing to Specialization of Neural Cell Types","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; Lunenfeld-Tanenbaum Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health; Harvard University","keywords":"Biology; Alternative splicing; RNA splicing; Caenorhabditis elegans; RNA-binding protein; Exon; Neuroligin; RNA; Cell biology; Genetics; Gene","score_opus":0.005454842970597104,"score_gpt":0.23228953717745776,"score_spread":0.22683469420686064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077845478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8822855,0.00022026757,0.11627985,0.00002519568,0.00004926098,0.00041690888,0.0000089174455,0.000003947951,0.0007102045],"genre_scores_gemma":[0.99884063,0.000010452171,0.00066792604,0.000052385134,0.000077527606,0.000010209166,0.000042117066,0.000022579483,0.00027615315],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987017,0.00014157387,0.00036707535,0.00022591725,0.00021432333,0.0003494433],"domain_scores_gemma":[0.99916154,0.000024222989,0.00025291924,0.00027806245,0.0001927743,0.00009047333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050119153,0.00012685206,0.0002770822,0.00007265068,0.000041658957,0.0000067070278,0.00019287692,0.00010542371,0.000006401969],"category_scores_gemma":[0.00019630036,0.00012564108,0.00012087864,0.00015757346,0.00003228001,0.00000347435,0.00013817173,0.00007590305,0.0000012805557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000116775984,0.000063818006,0.0051764227,0.000095955205,0.000022026337,0.0000015282707,0.00002396392,0.010823412,0.9827551,0.00004728603,0.000027321183,0.0008463568],"study_design_scores_gemma":[0.0008517325,0.00050967606,0.0006065534,0.000058261812,0.000019170438,5.5371237e-7,0.000022498589,0.009155086,0.9884023,0.000011792057,0.00025401902,0.0001083602],"about_ca_topic_score_codex":0.000068954425,"about_ca_topic_score_gemma":0.000008900296,"teacher_disagreement_score":0.1165552,"about_ca_system_score_codex":0.000011088137,"about_ca_system_score_gemma":0.000033632787,"threshold_uncertainty_score":0.5123494},"labels":[],"label_agreement":null},{"id":"W2079448689","doi":"10.1016/s1097-2765(01)00420-8","title":"Plant Hormone Signaling","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Abscisic acid; Arabidopsis; Plant hormone; Hormone; Signal transduction; Cell biology; Computational biology; Biochemistry; Gene; Mutant","score_opus":0.017137612725411106,"score_gpt":0.21017209355105848,"score_spread":0.19303448082564736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079448689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878271,0.0008257324,0.00008988146,0.00051993236,0.000028460143,0.00012322667,0.000028454466,0.000060467646,0.010496722],"genre_scores_gemma":[0.99854416,0.00008969774,0.00012738007,0.00046005813,0.00005820475,0.000009336735,0.00020521447,0.0000011124381,0.00050486426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989368,0.0000972421,0.0001179178,0.000269949,0.00020034915,0.00037779537],"domain_scores_gemma":[0.99970585,0.00005580619,0.000031576445,0.00006268825,0.000028140841,0.00011596465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016933482,0.00011562914,0.00011455659,0.000012982116,0.00010341589,0.000035594076,0.00027727362,0.00010442951,0.00024206433],"category_scores_gemma":[0.000018290993,0.000045530443,0.00007955953,0.00023065695,0.000038241375,0.000025763979,0.00008538597,0.00014382595,0.0002877309],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026222353,0.000042898544,0.0013341123,0.0000010023159,0.0000062773343,0.00056961685,0.000006229621,0.000006753109,0.9937624,0.000041679326,0.0005839222,0.0036189402],"study_design_scores_gemma":[0.00035443963,0.0005087037,0.009905741,0.000009727231,0.000016177399,0.00017941781,0.00007017368,0.00022746129,0.8054378,0.00044012666,0.18238804,0.00046220087],"about_ca_topic_score_codex":0.00006259568,"about_ca_topic_score_gemma":0.000023817394,"teacher_disagreement_score":0.18832456,"about_ca_system_score_codex":0.000012012401,"about_ca_system_score_gemma":0.000005866159,"threshold_uncertainty_score":0.36982945},"labels":[],"label_agreement":null},{"id":"W2079891276","doi":"10.1016/j.molcel.2010.12.006","title":"PARP-3 and APLF Function Together to Accelerate Nonhomologous End-Joining","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":311,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"Biotechnology and Biological Sciences Research Council; Cancer Research UK","keywords":"DNA ligase; Biology; DNA repair protein XRCC4; Non-homologous end joining; DNA repair; Ku80; Chromatin; DNA; Molecular biology; Poly ADP ribose polymerase; Sticky and blunt ends; Genetics; Cell biology; DNA-binding protein; DNA mismatch repair; Polymerase; Gene; Transcription factor","score_opus":0.03390383084429662,"score_gpt":0.25783510827728545,"score_spread":0.22393127743298882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079891276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87909067,0.0006698149,0.017265826,0.0003914418,0.00024983313,0.0003696802,0.0000038083595,0.00010122925,0.101857714],"genre_scores_gemma":[0.98664993,0.000029156043,0.003630476,0.008296939,0.000076269294,0.00005456732,0.000008543838,0.000040398863,0.0012137475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909574,0.00004483991,0.0001659744,0.00030112622,0.00015676655,0.00023554289],"domain_scores_gemma":[0.99943936,0.000010768502,0.000047906222,0.00027129927,0.000058505786,0.00017213615],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013440374,0.00014421406,0.00017872728,0.0000947084,0.00004954842,0.000014252895,0.000050623185,0.00008935007,0.0010982774],"category_scores_gemma":[0.000009693143,0.00013707553,0.000052035775,0.0001358496,0.000040192626,0.000041482414,0.000035443427,0.00014027413,0.0002282759],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009361675,0.0001951955,0.0055786134,0.00007753171,0.000091418675,0.00047153138,0.0024971568,0.000013727278,0.97025216,0.0004015301,0.0035663387,0.015918659],"study_design_scores_gemma":[0.002972572,0.0010813861,0.006918329,0.00006968303,0.00009978691,0.000087932065,0.00016017779,0.000046423047,0.93155324,0.0007208274,0.05598604,0.0003035934],"about_ca_topic_score_codex":0.000047110196,"about_ca_topic_score_gemma":0.0000032454768,"teacher_disagreement_score":0.107559256,"about_ca_system_score_codex":0.000040236617,"about_ca_system_score_gemma":0.000037623166,"threshold_uncertainty_score":0.99981487},"labels":[],"label_agreement":null},{"id":"W2079998088","doi":"10.1016/s1097-2765(02)00601-9","title":"An ESCRT into the Endosome","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"ESCRT; Endosome; Biology; Cell biology; Protein targeting; Ubiquitin; Vesicle; Budding; Sorting; Vesicular Transport Proteins; Transport protein; Computational biology; Membrane protein; Biochemistry; Membrane; Vacuolar protein sorting; Computer science; Gene","score_opus":0.005894285216747524,"score_gpt":0.19400945268756778,"score_spread":0.18811516747082024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079998088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9574883,0.0030230228,0.028213145,0.00024919191,0.00010973943,0.00015623722,0.000002438635,0.000021453101,0.010736481],"genre_scores_gemma":[0.99691004,0.00019342266,0.000386123,0.00062769756,0.00011540335,0.000014126173,0.00054314994,0.000026967718,0.0011830636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999199,0.000054767937,0.00012584076,0.0002847537,0.00013849349,0.000197192],"domain_scores_gemma":[0.9993168,0.0000022250238,0.000032688953,0.00053739076,0.000030803196,0.000080053534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009269524,0.00013256933,0.00007709191,0.000021942138,0.00009877396,0.000029444884,0.0002585465,0.00010933955,0.0001822457],"category_scores_gemma":[0.0000046412774,0.00010539755,0.00010842661,0.000073085466,0.00006233449,0.0000031131906,0.00002509657,0.00009005456,0.00008287957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008833677,0.000068541376,0.00041091355,0.000006031823,0.0000105595545,0.000021923795,0.00021823891,0.00006485273,0.99738395,0.00008696619,0.00014098873,0.0015782207],"study_design_scores_gemma":[0.00032031303,0.00018077418,0.0001934885,0.000002009611,0.00002119,0.000005490214,0.000058931153,0.0005948765,0.753499,0.00008807895,0.24485764,0.00017826751],"about_ca_topic_score_codex":0.000027977954,"about_ca_topic_score_gemma":0.000021869271,"teacher_disagreement_score":0.24471664,"about_ca_system_score_codex":0.0000059367685,"about_ca_system_score_gemma":0.000008489397,"threshold_uncertainty_score":0.42979872},"labels":[],"label_agreement":null},{"id":"W2080324904","doi":"10.1016/j.molcel.2012.03.015","title":"Negative Feedback Loops: Nutrient Starvation Employs a New tr(IKK) to Inhibit PI3K","year":2012,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Starvation; Nutrient; Cell biology; PI3K/AKT/mTOR pathway; Signal transduction; Ecology; Endocrinology","score_opus":0.011030969355969042,"score_gpt":0.225382952280627,"score_spread":0.21435198292465796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080324904","genre_codex":"review","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27839336,0.55487776,0.048182175,0.08133644,0.0068728803,0.006861662,0.0010823539,0.00027100125,0.022122344],"genre_scores_gemma":[0.012494972,0.007479958,0.0045655686,0.9328826,0.01420971,0.0003841867,0.0047062333,0.00052163523,0.022755103],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967391,0.00020271637,0.0005045682,0.0010328799,0.0005686206,0.00095211784],"domain_scores_gemma":[0.9980499,0.000016110678,0.0002911868,0.0010571852,0.00023259124,0.0003529965],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017787976,0.00069749076,0.00057270494,0.00016666479,0.000083717016,0.000099538505,0.0005182161,0.0011321991,0.00032933708],"category_scores_gemma":[0.00007249423,0.00071970455,0.00038006555,0.0002869229,0.00007045021,0.000009641982,0.0002721705,0.0007527759,0.00049150974],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057675046,0.00006947335,0.000019044075,0.00013031102,0.00012113086,0.000036841702,0.00020781321,0.000024323137,0.08777467,0.000012167099,0.90225786,0.00928868],"study_design_scores_gemma":[0.0006472136,0.00016020672,0.000008945717,0.00003877316,0.000112584734,0.0000018390995,0.000015668273,0.0000011787267,0.37787408,0.00015032564,0.62045366,0.0005355596],"about_ca_topic_score_codex":0.00012410911,"about_ca_topic_score_gemma":0.000018029243,"teacher_disagreement_score":0.85154617,"about_ca_system_score_codex":0.00009299791,"about_ca_system_score_gemma":0.00036040923,"threshold_uncertainty_score":0.9995254},"labels":[],"label_agreement":null},{"id":"W2080362293","doi":"10.1016/j.molcel.2010.03.015","title":"The ARF Tumor Suppressor Controls Ribosome Biogenesis by Regulating the RNA Polymerase I Transcription Factor TTF-I","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":97,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; Université Laval; SickKids Foundation; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Nucleoplasm; Nucleolus; Biology; Ribosome biogenesis; RNA polymerase I; Molecular biology; RNA polymerase II; Transcription (linguistics); Ribosomal RNA; Cell biology; 5.8S ribosomal RNA; Ribosome; RNA; RNA polymerase; Gene; Promoter; Gene expression; Genetics; Cytoplasm","score_opus":0.005412591867295319,"score_gpt":0.21341021483022848,"score_spread":0.20799762296293317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080362293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99080044,0.003890241,0.0021169735,0.0013971257,0.00036476462,0.00035230545,0.00015797719,0.000016700713,0.00090347236],"genre_scores_gemma":[0.99707985,0.00009738884,0.00010756928,0.0006046002,0.00015139092,0.000118289754,0.00008949469,0.00003750559,0.0017139403],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881846,0.00010696604,0.00023397854,0.0003398113,0.00018477875,0.00031599787],"domain_scores_gemma":[0.99894375,0.000026045029,0.00011995768,0.0007511049,0.000073506555,0.00008563289],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016650926,0.00018979298,0.00011446377,0.000017451865,0.0003965618,0.0001162834,0.00040373547,0.000114770366,0.00004812869],"category_scores_gemma":[0.00004248318,0.0001211812,0.00017655992,0.00008528737,0.000155204,0.000005155996,0.000038090613,0.00016528815,0.000012816911],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038878185,0.000037958718,0.00005549143,0.00000464099,0.00003147332,0.0000014474508,0.000027141059,0.000013625781,0.99532086,0.000108714485,0.0019313698,0.0024284008],"study_design_scores_gemma":[0.00042611492,0.00004793559,0.00026545933,0.0000020697792,0.000028048773,0.0000039760716,0.000041924788,0.00012746763,0.87251073,0.000040689807,0.1263508,0.00015477702],"about_ca_topic_score_codex":0.000067573026,"about_ca_topic_score_gemma":0.000033976736,"teacher_disagreement_score":0.124419436,"about_ca_system_score_codex":0.000008462536,"about_ca_system_score_gemma":0.00004987379,"threshold_uncertainty_score":0.4941626},"labels":[],"label_agreement":null},{"id":"W2081227994","doi":"10.1016/s1097-2765(00)80441-4","title":"Rearrangement of a Stable RNA Secondary Structure during VS Ribozyme Catalysis","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Ribozyme; Biology; VS ribozyme; Hairpin ribozyme; RNA; Base pair; Mammalian CPEB3 ribozyme; Nucleotide; Cleavage (geology); Nucleic acid structure; Protein secondary structure; Biochemistry; Stereochemistry; DNA; Biophysics; Chemistry; Gene","score_opus":0.00283889199327827,"score_gpt":0.18091406498135482,"score_spread":0.17807517298807654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081227994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894676,0.0015350678,0.0005244829,0.000051639065,0.000038636532,0.00018918881,0.00005466517,0.000010361337,0.008128317],"genre_scores_gemma":[0.9945746,0.00013952535,0.0015379993,0.00011591502,0.000048305217,0.000014561207,0.00012195366,0.000033853514,0.0034132532],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891996,0.00006988948,0.00022000268,0.00035034737,0.00018245571,0.00025734925],"domain_scores_gemma":[0.999256,0.0000027320136,0.000077508754,0.00054668065,0.00003946544,0.00007761982],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009098292,0.00017586046,0.00019590578,0.000042817774,0.000056011828,0.000016291882,0.00022705387,0.00014338513,0.001785903],"category_scores_gemma":[0.000007549428,0.00017459778,0.00014430106,0.00009488276,0.000034394143,0.0000037374614,0.0000625323,0.000076955024,0.000021802904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110509674,0.000041206487,0.000034441226,0.000070177986,0.00006269366,0.000019669445,0.00005819731,0.00016125996,0.99474585,0.000007417218,0.00014785312,0.0045407214],"study_design_scores_gemma":[0.00045416044,0.00012876379,0.00013764837,0.000012143461,0.00004085989,0.0000055888963,0.000026393693,0.0000062390886,0.9850082,0.00010173218,0.013886523,0.00019178905],"about_ca_topic_score_codex":0.0000471191,"about_ca_topic_score_gemma":0.000009401816,"teacher_disagreement_score":0.01373867,"about_ca_system_score_codex":0.000010875607,"about_ca_system_score_gemma":0.00004230976,"threshold_uncertainty_score":0.9991266},"labels":[],"label_agreement":null},{"id":"W2081264027","doi":"10.1016/j.molcel.2012.05.045","title":"Tandem Protein Interaction Modules Organize the Ubiquitin-Dependent Response to DNA Double-Strand Breaks","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":148,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; Lunenfeld-Tanenbaum Research Institute; Ontario Institute for Cancer Research; University of Toronto; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Ubiquitin; Tandem; DNA; Cell biology; Computational biology; Genetics; Protein–protein interaction; Biophysics; Gene","score_opus":0.012628928912782804,"score_gpt":0.2425096860894803,"score_spread":0.22988075717669748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081264027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9871402,0.00052088674,0.004767225,0.0005937486,0.00020379515,0.0008935133,0.000015924856,0.000033175787,0.0058315285],"genre_scores_gemma":[0.996086,0.000009547971,0.00052375253,0.000760324,0.00028713452,0.00015704393,0.000043914068,0.000058082016,0.002074176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983659,0.00028929656,0.0002372387,0.0003664093,0.00025629517,0.0004848944],"domain_scores_gemma":[0.99899966,0.000016814394,0.000090866364,0.0005822914,0.0000878981,0.00022249766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007248609,0.000249672,0.00014989056,0.000050334253,0.00015472731,0.000087263725,0.00031714,0.00018270365,0.000114606395],"category_scores_gemma":[0.00006989397,0.0002002007,0.0001168703,0.00012307378,0.00004598903,0.000012165196,0.00020174406,0.0001926239,0.00017814337],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009200211,0.00012245505,0.00011927329,0.00001609127,0.00002905506,0.000009929896,0.00026530065,0.000032499458,0.9971145,0.00007354699,0.0003524268,0.000944895],"study_design_scores_gemma":[0.00085727737,0.00024152781,0.00033575992,0.000016538997,0.00002209161,0.000033264067,0.00020545612,0.000005612433,0.9342113,0.000028509068,0.063783795,0.00025888276],"about_ca_topic_score_codex":0.00002083502,"about_ca_topic_score_gemma":0.000011579273,"teacher_disagreement_score":0.06343137,"about_ca_system_score_codex":0.00003477178,"about_ca_system_score_gemma":0.000055796165,"threshold_uncertainty_score":0.81639475},"labels":[],"label_agreement":null},{"id":"W2083308605","doi":"10.1016/s1097-2765(03)00100-x","title":"The Histone Variant MacroH2A Interferes with Transcription Factor Binding and SWI/SNF Nucleosome Remodeling","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":272,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"","keywords":"Biology; SWI/SNF; Nucleosome; Histone; Transcription factor; Psychological repression; Chromatin remodeling; Transcription (linguistics); Genetics; Cell biology; Chromatin structure remodeling (RSC) complex; DNA; Gene; Gene expression","score_opus":0.00517456928761226,"score_gpt":0.1975390638054309,"score_spread":0.19236449451781865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083308605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97153974,0.0018231804,0.024638712,0.000072030285,0.00008924909,0.00014498601,0.000010236181,0.000009420006,0.0016724316],"genre_scores_gemma":[0.9963176,0.00039080612,0.002618098,0.00009342839,0.000017670087,0.000007290004,0.000025418432,0.000037754096,0.0004919386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916005,0.000056032906,0.00016022714,0.00029225356,0.0000940939,0.00023736098],"domain_scores_gemma":[0.9995386,0.000005894644,0.000063348576,0.0002859236,0.000038416605,0.000067829045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010877964,0.00016243121,0.000102789876,0.00002419035,0.00017604706,0.00007511601,0.00012681745,0.000094434596,0.000006543767],"category_scores_gemma":[0.000011717543,0.00012245514,0.00005268914,0.00004556904,0.00006296828,0.000003089219,0.00003278188,0.000097273056,0.0000035228716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033127064,0.00002115485,0.000057739453,0.000016838696,0.00002594327,0.000011774733,0.000093564435,0.00022830689,0.9981382,0.00039420777,0.000021335658,0.0009578092],"study_design_scores_gemma":[0.0010646571,0.00038340586,0.000116713534,0.00002636091,0.000054179403,0.00009973271,0.0003486999,0.003288018,0.9648236,0.00031893828,0.029022124,0.0004535663],"about_ca_topic_score_codex":0.000009569851,"about_ca_topic_score_gemma":0.000020751644,"teacher_disagreement_score":0.033314593,"about_ca_system_score_codex":0.000020987878,"about_ca_system_score_gemma":0.000035479774,"threshold_uncertainty_score":0.49935758},"labels":[],"label_agreement":null},{"id":"W2083662478","doi":"10.1016/j.molcel.2013.10.026","title":"HDAC5—A Critical Player in the p53 Acetylation Network","year":2013,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Biology; Acetylation; Cell cycle; DNA damage; Oncogene; Gene; Transcription factor; Genetics; Cell biology; Molecular biology; Cancer research; DNA","score_opus":0.010077420457478836,"score_gpt":0.24570715895825143,"score_spread":0.2356297385007726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083662478","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24051988,0.05299996,0.0463708,0.54601026,0.003237781,0.0039032693,0.00010453969,0.00008051299,0.106773004],"genre_scores_gemma":[0.49112806,0.00071633165,0.0027419266,0.49094898,0.0076520937,0.00027244416,0.0033974324,0.00020453594,0.0029381919],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99782395,0.00041810074,0.00033876204,0.00054980465,0.00035552646,0.00051386445],"domain_scores_gemma":[0.9989384,0.00007737125,0.000105292,0.00074547733,0.00009162525,0.00004187896],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035267568,0.00032501813,0.00022209858,0.000057978308,0.000077868106,0.00010568287,0.00043455898,0.0010996439,0.000073823794],"category_scores_gemma":[0.00009587509,0.00026923924,0.00018189702,0.0001387957,0.00007732951,0.000003248213,0.000113268885,0.0008455544,0.000099381905],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013219974,0.000058662266,0.00030851105,0.000108444816,0.000032047006,0.00021711423,0.00006750679,0.001233828,0.096980326,0.0000979941,0.8998344,0.0010479419],"study_design_scores_gemma":[0.00024206704,0.00012211435,0.00020637484,0.00001984783,0.00004333711,0.000004376694,0.000008833573,0.00018092383,0.03901343,0.0010897978,0.9586774,0.00039149757],"about_ca_topic_score_codex":0.00002087618,"about_ca_topic_score_gemma":0.000006593246,"teacher_disagreement_score":0.25060818,"about_ca_system_score_codex":0.000018848403,"about_ca_system_score_gemma":0.000064958156,"threshold_uncertainty_score":0.999976},"labels":[],"label_agreement":null},{"id":"W2083873972","doi":"10.1016/s1097-2765(03)00402-7","title":"MazF Cleaves Cellular mRNAs Specifically at ACA to Block Protein Synthesis in Escherichia coli","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":556,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Biology; Escherichia coli; Escherichia coli Proteins; Cell biology; Protein biosynthesis; Gene; Molecular biology; Biochemistry","score_opus":0.0062859281342493144,"score_gpt":0.19165714035947654,"score_spread":0.18537121222522723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083873972","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917225,0.00051937054,0.00047791397,0.00035061763,0.00012739221,0.0005869327,0.000013720379,0.00002204368,0.006179468],"genre_scores_gemma":[0.99144775,0.000069480295,0.0060952073,0.00038441387,0.00006249021,0.0000998599,0.00001915789,0.00006464482,0.0017570158],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980581,0.00016569773,0.00034284656,0.0007101766,0.00017063077,0.0005525962],"domain_scores_gemma":[0.9989886,0.000006762035,0.00008448598,0.0006911783,0.00004801583,0.00018092127],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002088168,0.0003070763,0.00027246343,0.00010089383,0.000064473265,0.000038316397,0.00037398902,0.0005260778,0.00010183989],"category_scores_gemma":[0.00010668501,0.0003181778,0.00013084123,0.00026073115,0.00008431907,0.0000017418339,0.00024887544,0.0001769023,0.00013675092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009710358,0.00014841062,0.00013772455,0.000020751655,0.000019523914,0.00007471136,0.000016361095,0.00004534157,0.998565,0.00021355152,0.00033665085,0.00032483085],"study_design_scores_gemma":[0.0003266041,0.0002504535,0.00016618114,0.000012946467,0.0000120465575,0.000004373627,0.000024990131,0.000004842475,0.8176558,0.00005196978,0.18115456,0.00033521221],"about_ca_topic_score_codex":0.0000144608775,"about_ca_topic_score_gemma":0.000042288233,"teacher_disagreement_score":0.18090922,"about_ca_system_score_codex":0.00004587478,"about_ca_system_score_gemma":0.000070516915,"threshold_uncertainty_score":0.99992704},"labels":[],"label_agreement":null},{"id":"W2083977578","doi":"10.1016/j.molcel.2013.11.005","title":"Conserved RNA Helicase FRH Acts Nonenzymatically to Support the Intrinsically Disordered Neurospora Clock Protein FRQ","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institutes of Health; Fonds de Recherche du Québec - Santé; University of Missouri","keywords":"Neurospora crassa; Biology; RNA Helicase A; Helicase; Cell biology; Cell division control protein 4; Genetics; Neurospora; Circadian clock; Intrinsically disordered proteins; RNA; Biochemistry; Ubiquitin; Gene; Ubiquitin ligase","score_opus":0.005794469589664338,"score_gpt":0.207202606741823,"score_spread":0.20140813715215866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083977578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9718151,0.000088718545,0.020077398,0.0025820262,0.00009465336,0.0016046144,0.000023654602,0.000038432016,0.0036754163],"genre_scores_gemma":[0.99039775,0.000020693009,0.002022037,0.005738551,0.00006267911,0.00038537476,0.00006251476,0.00006542161,0.0012449851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981236,0.000101025485,0.00035781122,0.0005833765,0.00028750856,0.0005466925],"domain_scores_gemma":[0.9984323,0.000015799758,0.00011224761,0.000896542,0.00019127662,0.0003518379],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001817267,0.00031653416,0.00024023614,0.000037659323,0.00012562584,0.00012024482,0.0006148536,0.00018033234,0.00020345913],"category_scores_gemma":[0.00022654873,0.0002411195,0.00015820844,0.00016873004,0.00008312353,0.0000067888914,0.00038931434,0.00019162048,0.00042851365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054263044,0.00017550115,0.0000043790596,0.000041525647,0.000020672813,0.000046272362,0.00004331725,0.000014658582,0.9970519,0.00037678014,0.0010126125,0.0011581415],"study_design_scores_gemma":[0.00053475,0.00073891686,0.000027007356,0.000015175256,0.000024213632,0.000020015701,0.00005367957,0.00010957329,0.95439285,0.0006544851,0.0431082,0.0003211379],"about_ca_topic_score_codex":0.00005604352,"about_ca_topic_score_gemma":0.000018512936,"teacher_disagreement_score":0.04265903,"about_ca_system_score_codex":0.000010831244,"about_ca_system_score_gemma":0.00016469281,"threshold_uncertainty_score":0.98325676},"labels":[],"label_agreement":null},{"id":"W2084908837","doi":"10.1016/j.molcel.2014.03.006","title":"Structure of a Eukaryotic RNase III Postcleavage Complex Reveals a Double-Ruler Mechanism for Substrate Selection","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Ribonuclease III; RNase MRP; RNase P; RNase H; RNase PH; RNA; Cell biology; RNA silencing; Exosome complex; Biochemistry; Genetics; Gene; RNA interference","score_opus":0.011229600203455235,"score_gpt":0.22773394634353084,"score_spread":0.2165043461400756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084908837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8343053,0.00008178707,0.16363272,0.000057995163,0.00008884154,0.00061123306,0.00003919736,0.00001761704,0.0011652961],"genre_scores_gemma":[0.98796964,0.000013438161,0.010752817,0.00030868116,0.000090560425,0.00001703551,0.00013946998,0.00005289717,0.00065547344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873656,0.00012091494,0.00026992627,0.00041857344,0.00015038316,0.00030362362],"domain_scores_gemma":[0.9991613,0.000013645636,0.00018969916,0.00036865164,0.00017052353,0.00009616595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018302044,0.00022437815,0.00025510255,0.00006166267,0.00008238022,0.00002079632,0.00022712193,0.00023531588,0.000049135488],"category_scores_gemma":[0.000027964195,0.00022656766,0.00017847888,0.00010004127,0.000033546352,0.0000040230284,0.000047081292,0.000068710964,0.00000528235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033304503,0.00004414625,0.000018029144,0.000092955226,0.00004052839,0.0000022919196,0.000019878373,0.000063339874,0.9916933,0.0071324436,0.00017669906,0.00038329753],"study_design_scores_gemma":[0.0017202462,0.0005544877,0.000054200173,0.000015802289,0.000058754395,0.000010567148,0.000017871696,0.00029732694,0.99145705,0.0040743425,0.001485266,0.00025410476],"about_ca_topic_score_codex":0.000025617886,"about_ca_topic_score_gemma":0.000017495813,"teacher_disagreement_score":0.1536643,"about_ca_system_score_codex":0.000010633439,"about_ca_system_score_gemma":0.000038354254,"threshold_uncertainty_score":0.9239161},"labels":[],"label_agreement":null},{"id":"W2086004955","doi":"10.1016/j.molcel.2012.12.015","title":"tRNA Binding, Structure, and Localization of the Human Interferon-Induced Protein IFIT5","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Tetratricopeptide; Biology; RNA; RNA-binding protein; Cell biology; Plasma protein binding; Interferon; Transfer RNA; Cytoplasm; Molecular biology; Biochemistry; Gene; Genetics","score_opus":0.006662931457120345,"score_gpt":0.20945470394991655,"score_spread":0.2027917724927962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086004955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99754065,0.0003433451,0.00017080072,0.000039527982,0.0002203751,0.00041426028,0.000005512358,0.000013938327,0.0012515975],"genre_scores_gemma":[0.9959063,0.0000013400626,0.000012719252,0.00008717267,0.000003034601,0.0000099111385,0.000009405263,0.000015047111,0.0039550946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992291,0.00023105294,0.00018923281,0.00015912311,0.000029539655,0.00016197718],"domain_scores_gemma":[0.99954593,0.0000060469065,0.00011041419,0.0002794387,0.000047531485,0.000010620862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004175359,0.000121002486,0.00013998714,0.000056182627,0.000099608296,0.000013615185,0.00020215742,0.00016325881,0.00055566523],"category_scores_gemma":[0.00002317926,0.00008483089,0.00006805165,0.0000812409,0.00012004201,0.000038700495,0.00015328225,0.00016979662,0.000049946735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001667479,0.000028939943,0.00066383614,0.000027284535,0.00002310633,3.2753874e-7,0.00014707887,0.0000013714415,0.99826044,0.0002115041,0.00026758,0.0003518818],"study_design_scores_gemma":[0.00051761797,0.0001421445,0.0020924106,0.000062567844,0.000013306084,0.000006110051,0.000054314787,0.0000051362945,0.9957344,0.00013290909,0.0011446725,0.00009438718],"about_ca_topic_score_codex":0.00013091284,"about_ca_topic_score_gemma":0.0000053396234,"teacher_disagreement_score":0.002703497,"about_ca_system_score_codex":0.000018620836,"about_ca_system_score_gemma":0.000021258877,"threshold_uncertainty_score":0.6084145},"labels":[],"label_agreement":null},{"id":"W2086248882","doi":"10.1016/j.molcel.2007.01.001","title":"RACK1 Competes with HSP90 for Binding to HIF-1α and Is Required for O2-Independent and HSP90 Inhibitor-Induced Degradation of HIF-1α","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":467,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Vector Institute","keywords":"Hsp90; Ubiquitin ligase; Biology; Ubiquitin; Proteasome; Transcription factor; Heat shock protein; Cell biology; Protein degradation; Protein subunit; Molecular biology; Biochemistry","score_opus":0.012028795613727465,"score_gpt":0.24920030325635253,"score_spread":0.23717150764262507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086248882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96146125,0.002033301,0.03477267,0.00013880554,0.00026654056,0.0009758273,0.00007666722,0.000010532016,0.00026442492],"genre_scores_gemma":[0.9863649,0.00013703726,0.012012479,0.00037452817,0.00030646689,0.0000590913,0.00014851216,0.00005386383,0.0005431181],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986191,0.000023661547,0.00029495047,0.00051991484,0.00017976318,0.00036262072],"domain_scores_gemma":[0.99918115,0.000029610972,0.0001561529,0.00029166744,0.00017023325,0.00017118648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033820796,0.00023338708,0.00028725216,0.00011299226,0.000109355744,0.000036694266,0.0001121334,0.00018210578,0.0000035187159],"category_scores_gemma":[0.00004762119,0.00022514442,0.000095987685,0.00012255688,0.00005455989,0.000009556671,0.00008162516,0.000061725725,8.1416334e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041768505,0.000050722596,0.00021240844,0.0001176011,0.000054546683,0.0000017246243,0.00013189993,0.0000048921615,0.99053115,0.00010661352,0.000645274,0.00772546],"study_design_scores_gemma":[0.0024024036,0.0007180701,0.00041025697,0.000032243737,0.00009695971,0.000008583168,0.00020205112,0.00003950737,0.96055365,0.000052596875,0.03519681,0.00028689395],"about_ca_topic_score_codex":0.000030418572,"about_ca_topic_score_gemma":0.000071895636,"teacher_disagreement_score":0.034551535,"about_ca_system_score_codex":0.000017843804,"about_ca_system_score_gemma":0.00006799848,"threshold_uncertainty_score":0.9181123},"labels":[],"label_agreement":null},{"id":"W2086588638","doi":"10.1016/j.molcel.2014.05.002","title":"Directed Network Wiring Identifies a Key Protein Interaction in Embryonic Stem Cell Differentiation","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Basic Energy Sciences; National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; Office of Science; U.S. Department of Energy","keywords":"Biology; GRB2; Embryonic stem cell; Computational biology; SH2 domain; Protein tyrosine phosphatase; Modular design; Stem cell; Cellular differentiation; Cell biology; Endoderm; Modularity (biology); Signal transduction; Genetics; Proto-oncogene tyrosine-protein kinase Src; Computer science; Gene","score_opus":0.004965888189797999,"score_gpt":0.2141530257589482,"score_spread":0.2091871375691502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086588638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873173,0.00067817175,0.0075642793,0.00002473669,0.00034838574,0.0003028213,0.000002271508,0.000045192253,0.0037168066],"genre_scores_gemma":[0.99781895,0.000032564465,0.00013074516,0.00011438166,0.00016675206,0.0000912828,0.000087638306,0.0000350967,0.0015225781],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871665,0.00021859315,0.00022862769,0.00040546627,0.00013854183,0.00029213546],"domain_scores_gemma":[0.9993926,0.0000078996445,0.00013469686,0.00033704352,0.000051594423,0.00007616333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012845494,0.00018817035,0.00014656264,0.00006388351,0.00008753361,0.00007398751,0.00013622394,0.00014152235,0.000025673591],"category_scores_gemma":[0.00001481304,0.0001926037,0.00012213232,0.00013744149,0.000020203765,0.000009252862,0.00011933499,0.00013075436,0.00002868543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000705871,0.00011178161,0.0012842044,0.00006618709,0.000012247538,0.0000042317083,0.000036173984,0.0041489922,0.9924206,0.000019547722,0.0010824372,0.00074300345],"study_design_scores_gemma":[0.00068021606,0.0002154502,0.001680629,0.000074054136,0.000017975826,0.0000015403253,0.00003237124,0.002447778,0.98846877,0.00017626437,0.00592948,0.00027547614],"about_ca_topic_score_codex":0.00003863321,"about_ca_topic_score_gemma":0.000059141694,"teacher_disagreement_score":0.010501626,"about_ca_system_score_codex":0.000026751764,"about_ca_system_score_gemma":0.000023085346,"threshold_uncertainty_score":0.78541505},"labels":[],"label_agreement":null},{"id":"W2088215815","doi":"10.1016/j.molcel.2009.08.004","title":"Mammalian miRNA RISC Recruits CAF1 and PABP to Affect PABP-Dependent Deadenylation","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":385,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Cancer Institute; Howard Hughes Medical Institute","keywords":"Biology; microRNA; Cell biology; Gene silencing; Poly(A)-binding protein; Messenger RNA; Three prime untranslated region; Psychological repression; Translation (biology); RNA-binding protein; Ribonuclease III; Untranslated region; RNA interference; RNA; Gene expression; Genetics; Gene","score_opus":0.010409824564097527,"score_gpt":0.2682709920169381,"score_spread":0.2578611674528406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088215815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98709095,0.0011426613,0.005698006,0.00064404315,0.000042773605,0.00039019826,0.000006005174,0.0000151562945,0.0049702376],"genre_scores_gemma":[0.99349576,0.00008177548,0.0011632539,0.00083768164,0.00007951723,0.000016063468,0.000052560343,0.000021981832,0.00425143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869406,0.00010386475,0.00015479223,0.0004298309,0.00023046024,0.0003869927],"domain_scores_gemma":[0.999278,0.0000064183328,0.000039566952,0.00035221837,0.00005589522,0.00026788324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021855591,0.00017287555,0.00013316488,0.00007141546,0.00008908344,0.00006992978,0.00016223713,0.0001391751,0.00002078556],"category_scores_gemma":[0.000056390494,0.00017014993,0.000069268965,0.00009989644,0.000020700361,0.0000046650152,0.00008643345,0.000116171126,0.00006108025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006013032,0.000037050737,0.00087566924,0.0000133232625,0.000013504498,0.000069291185,0.000027540656,0.00007387954,0.9885751,0.000021509637,0.0013698436,0.008863156],"study_design_scores_gemma":[0.0005464385,0.00069887383,0.0054303645,0.000013993234,0.000013233398,0.000017332839,0.000027029344,0.000087217915,0.9809507,0.000058814443,0.011913684,0.00024227687],"about_ca_topic_score_codex":0.000044181463,"about_ca_topic_score_gemma":0.00003756104,"teacher_disagreement_score":0.01054384,"about_ca_system_score_codex":0.000020561198,"about_ca_system_score_gemma":0.000035141173,"threshold_uncertainty_score":0.69385123},"labels":[],"label_agreement":null},{"id":"W2088389307","doi":"10.1016/s1097-2765(02)00518-x","title":"Functional Interaction of Yeast Pre-mRNA 3′ End Processing Factors with RNA Polymerase II","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":309,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; Sunnybrook Health Science Centre","funders":"National Institute of General Medical Sciences","keywords":"Biology; RNA polymerase II; Rna processing; Yeast; Messenger RNA; Cell biology; RNA; Polymerase; Computational biology; Transcription factor II D; Molecular biology; Genetics; RNA polymerase; Gene expression; Gene; Promoter","score_opus":0.011153363388107676,"score_gpt":0.23048841141830925,"score_spread":0.21933504803020157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088389307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99017054,0.0008367531,0.0049380604,0.000044358447,0.000035460995,0.00010295854,0.0000074323134,0.000008331862,0.0038561323],"genre_scores_gemma":[0.99570507,0.000025249885,0.00022308624,0.000055664106,0.000047573132,0.000007611582,0.000060689006,0.000022128233,0.0038529106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991549,0.00003152323,0.0001356558,0.00024407695,0.00022384152,0.00020996507],"domain_scores_gemma":[0.9995575,0.0000033063013,0.00008026487,0.00019268182,0.00007413451,0.000092127324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004681894,0.00012676386,0.00010003668,0.00005830799,0.00009081919,0.000019623394,0.00009503998,0.000069613205,0.00017149892],"category_scores_gemma":[0.000016123922,0.000106161424,0.00006530852,0.00009645936,0.000058094778,0.000008190153,0.00006006788,0.00010614484,0.0000054699644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093563205,0.00012072294,0.0007071113,0.000030815492,0.000025676398,0.00000958997,0.00007462411,0.00021437975,0.9946237,0.0000029863015,0.0003375919,0.0037592165],"study_design_scores_gemma":[0.0004404291,0.00041235093,0.0008429807,0.000020628,0.000013108054,0.000009372415,0.000079400066,0.00069903483,0.9956605,0.0000019277,0.0016951285,0.00012514794],"about_ca_topic_score_codex":0.000049105147,"about_ca_topic_score_gemma":0.000010242748,"teacher_disagreement_score":0.005534575,"about_ca_system_score_codex":0.000012894277,"about_ca_system_score_gemma":0.000034495246,"threshold_uncertainty_score":0.43291372},"labels":[],"label_agreement":null},{"id":"W2088412411","doi":"10.1016/j.molcel.2009.03.006","title":"How Common Are Extraribosomal Functions of Ribosomal Proteins?","year":2009,"lang":"en","type":"review","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":782,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; U.S. Public Health Service; National Institutes of Health; Albert Einstein Cancer Center","keywords":"Biology; Ribosome; Ribosomal RNA; Ribosomal protein; 5.8S ribosomal RNA; Cell biology; RNA; Computational biology; Eukaryotic Ribosome; Genetics; Gene","score_opus":0.022317370263881635,"score_gpt":0.26847335327548755,"score_spread":0.2461559830116059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088412411","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003397354,0.9912218,0.0036737958,0.000050841365,0.00011405517,0.0008149447,0.00022224286,0.000016601942,0.003546002],"genre_scores_gemma":[0.0057966756,0.9862636,0.0006131429,0.000051314193,0.00020880222,0.00022711098,0.0013181707,0.00008383265,0.005437405],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99833035,0.000157134,0.00041298874,0.00058669044,0.00021285063,0.00029999],"domain_scores_gemma":[0.99821043,0.0000059665185,0.00053801254,0.001029835,0.00010908729,0.00010667892],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000083883744,0.0004267416,0.000832505,0.00010602601,0.000079590405,0.00005832663,0.00043773706,0.00053923886,0.000017543836],"category_scores_gemma":[0.000018918678,0.00039166043,0.00071450917,0.0002188743,0.00009036193,0.000004080169,0.00009589999,0.00026048784,0.000016374703],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020740708,0.00047782596,0.000012209556,0.005280823,0.00022366295,0.000047515732,0.0000072401313,0.0000166327,0.03936536,0.00017471438,0.003670629,0.95070267],"study_design_scores_gemma":[0.00019327622,0.0002029546,0.000008796433,0.0005890355,0.00036054433,0.000018339862,0.000011064597,0.0000015214554,0.0105901025,0.000016374643,0.98761576,0.00039223395],"about_ca_topic_score_codex":0.000008270141,"about_ca_topic_score_gemma":0.00000779101,"teacher_disagreement_score":0.98394513,"about_ca_system_score_codex":0.000030754887,"about_ca_system_score_gemma":0.00022330252,"threshold_uncertainty_score":0.99985355},"labels":[],"label_agreement":null},{"id":"W2088621072","doi":"10.1016/j.molcel.2011.08.038","title":"ROS-Mediated p53 Induction of Lpin1 Regulates Fatty Acid Oxidation in Response to Nutritional Stress","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer, Lipids, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":187,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; York University; University of Toronto","funders":"","keywords":"Biology; Suppressor; Mutation; Cell biology; Function (biology); DNA damage; Beta oxidation; Gene; Fatty acid metabolism; Phenotype; C2C12; Fatty acid; Genetics; Biochemistry; DNA; Myogenesis","score_opus":0.010215120503744046,"score_gpt":0.21964380131675013,"score_spread":0.20942868081300609,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088621072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99566567,0.0006958582,0.0019399617,0.00006666504,0.000821582,0.00024071637,0.00005760959,0.000009303424,0.00050264515],"genre_scores_gemma":[0.9967665,0.000118656906,0.0019842333,0.0001371668,0.000482176,0.00003907416,0.00031087338,0.000021659467,0.00013964488],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989696,0.00013403707,0.00024682118,0.0003071255,0.00015043677,0.00019196408],"domain_scores_gemma":[0.99941987,0.000006481924,0.00008580373,0.0002941094,0.00011164436,0.00008211067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021459494,0.00013304388,0.00014941614,0.00013946542,0.000022735314,0.000007179163,0.00013130525,0.00016870063,0.000034932797],"category_scores_gemma":[0.00008939435,0.0001474995,0.00007454788,0.00019155433,0.000047412614,0.0000063840644,0.00006000008,0.000074323834,0.000010687469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009189741,0.0001694348,0.00065838976,0.000023784361,0.000012206107,8.1394955e-7,0.00017085669,0.00004473199,0.9967083,0.000027296473,0.0007321268,0.00053311395],"study_design_scores_gemma":[0.00086387905,0.0001814587,0.025171252,0.000021484722,0.000011782437,0.000002747736,0.00008334944,0.0000071428917,0.9567623,0.000074532785,0.01666477,0.00015529223],"about_ca_topic_score_codex":0.000083499086,"about_ca_topic_score_gemma":0.000048487746,"teacher_disagreement_score":0.03994596,"about_ca_system_score_codex":0.000020493395,"about_ca_system_score_gemma":0.00007603491,"threshold_uncertainty_score":0.6014855},"labels":[],"label_agreement":null},{"id":"W2089778398","doi":"10.1016/j.molcel.2009.12.037","title":"The Connecdenn DENN Domain: A GEF for Rab35 Mediating Cargo-Specific Exit from Early Endosomes","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":199,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"National Institute of Neurological Disorders and Stroke; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Endosome; Rab; Biology; Guanine nucleotide exchange factor; Small GTPase; Cell biology; GTPase; Domain (mathematical analysis); Function (biology); Computational biology; Signal transduction","score_opus":0.005074376749907383,"score_gpt":0.1940364808285046,"score_spread":0.18896210407859723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089778398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9461995,0.0031940904,0.047852755,0.00021580607,0.0006111779,0.0004440776,0.00006703671,0.000022689444,0.0013928616],"genre_scores_gemma":[0.99274886,0.00034529268,0.0031705678,0.00016645035,0.00055937876,0.00010078708,0.0024168466,0.00006119334,0.0004306338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986079,0.000048379276,0.00027473696,0.00046909854,0.00020272525,0.0003972105],"domain_scores_gemma":[0.9990172,0.00005775564,0.00011091266,0.0005943975,0.00009681343,0.00012294255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024641983,0.0002271514,0.00016977954,0.000040294133,0.0002635039,0.00009141023,0.0003586803,0.0002629965,0.00003390918],"category_scores_gemma":[0.000032376145,0.00019077538,0.00025443712,0.00008692258,0.00011610846,0.0000044713483,0.0000531093,0.00021609053,0.000021539627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085272506,0.000027392298,0.0008232749,0.000008612318,0.00003972147,0.00001698412,0.00014871075,0.0000054642264,0.996915,0.0007527258,0.00024138762,0.00093546655],"study_design_scores_gemma":[0.00095568964,0.00010108359,0.000738043,0.0000036425058,0.000027608312,0.0000025660156,0.000084614585,0.000056253466,0.69393957,0.0012162526,0.3026333,0.0002413748],"about_ca_topic_score_codex":0.000050218787,"about_ca_topic_score_gemma":0.00014515927,"teacher_disagreement_score":0.3029754,"about_ca_system_score_codex":0.0000062683885,"about_ca_system_score_gemma":0.000042282365,"threshold_uncertainty_score":0.7779594},"labels":[],"label_agreement":null},{"id":"W2092809155","doi":"10.1016/j.molcel.2005.04.003","title":"Arginine Methylation","year":2005,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1087,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Environmental Health Sciences; National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Biology; Methylation; Computational biology; Arginine; Genetics; Gene; Amino acid","score_opus":0.015188181080429276,"score_gpt":0.2965598453480903,"score_spread":0.281371664267661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092809155","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003219361,0.9892288,0.0041625663,0.00001871929,0.00027226223,0.00057271036,0.000025615544,0.000027324646,0.0056598405],"genre_scores_gemma":[0.00012080499,0.99182874,0.000890224,0.000049535625,0.0007018823,0.00007775141,0.002172047,0.00012977672,0.004029258],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99825424,0.00015866153,0.00045120317,0.0006365547,0.00020836864,0.0002909667],"domain_scores_gemma":[0.9988014,0.000008515435,0.0003139009,0.000717452,0.000063223335,0.00009552021],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015537995,0.00042948153,0.0006229479,0.00013578979,0.00004490091,0.000029673538,0.0002581351,0.00072693866,0.00007710107],"category_scores_gemma":[0.000022815415,0.00043021608,0.0005689434,0.00022658225,0.00003681263,0.0000023408186,0.00011908685,0.0002296754,0.00019381648],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000047433364,0.000030843028,1.3565395e-7,0.0008939214,0.00010362751,0.000005384757,0.0000037708771,0.0002676102,0.0056135827,0.000013966629,0.001866906,0.9911955],"study_design_scores_gemma":[0.00020433754,0.00006835109,3.0355403e-7,0.000370327,0.00043330976,0.000017517013,9.581935e-7,0.00002288414,0.00691726,0.00000695426,0.99152386,0.00043392938],"about_ca_topic_score_codex":0.0000039053402,"about_ca_topic_score_gemma":0.000004758093,"teacher_disagreement_score":0.9907616,"about_ca_system_score_codex":0.00008038042,"about_ca_system_score_gemma":0.00023656772,"threshold_uncertainty_score":0.999815},"labels":[],"label_agreement":null},{"id":"W2095029203","doi":"10.1016/j.molcel.2010.11.003","title":"Pervasive and Cooperative Deadenylation of 3′UTRs by Embryonic MicroRNA Families","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centre Hospitalier Universitaire Sainte-Justine; McGill University Health Centre","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Science Council","keywords":"Biology; microRNA; Gene silencing; Embryonic stem cell; Cell biology; RNA interference; Genetics; Zygote; Argonaute; Embryo; Embryogenesis; RNA; Gene","score_opus":0.003737153911716354,"score_gpt":0.22532540686234143,"score_spread":0.22158825295062506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095029203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99585915,0.0012785901,0.001199845,0.000100836005,0.00003051051,0.00013877783,0.000017188,0.0000037670352,0.0013713618],"genre_scores_gemma":[0.9973403,0.00021460015,0.0005858981,0.000102373,0.000020088128,0.000007834855,0.00007886603,0.000014970074,0.0016350693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99936616,0.00003945769,0.000103302875,0.00022144483,0.00010006336,0.00016958677],"domain_scores_gemma":[0.99958414,0.000008247134,0.000043041113,0.00019118022,0.00009902027,0.000074370095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008708277,0.00010157301,0.00010050738,0.0000311179,0.000050847906,0.000018714005,0.00010081718,0.00010828803,0.0000121891935],"category_scores_gemma":[0.00005060469,0.000096130716,0.000043165317,0.000054432458,0.0001158195,0.000003252708,0.00007097434,0.00009798437,0.000004357136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023827895,0.000024973273,0.00085902796,0.000019263178,0.000016947142,0.000003717608,0.00004420115,0.000008707294,0.99748546,0.00003807863,0.000719795,0.0007560248],"study_design_scores_gemma":[0.00037431403,0.00017883438,0.00040552198,0.000004062477,0.0000074256586,0.0000045525694,0.00011277065,0.0000901767,0.9921409,0.000009640529,0.006568855,0.00010295011],"about_ca_topic_score_codex":0.000041060946,"about_ca_topic_score_gemma":0.000035752204,"teacher_disagreement_score":0.00584906,"about_ca_system_score_codex":0.0000032988332,"about_ca_system_score_gemma":0.000049513987,"threshold_uncertainty_score":0.39200968},"labels":[],"label_agreement":null},{"id":"W2095585040","doi":"10.1016/j.molcel.2013.05.018","title":"Extensive Rewiring and Complex Evolutionary Dynamics in a C. elegans Multiparameter Transcription Factor Network","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Human Genome Research Institute","keywords":"Biology; Transcription factor; Evolutionary dynamics; Computational biology; Gene duplication; Gene regulatory network; Genetics; Phylogenetic tree; Gene; Evolutionary biology; Gene expression; Population","score_opus":0.00979272904507431,"score_gpt":0.20524488222387047,"score_spread":0.19545215317879616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095585040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94990945,0.0012862629,0.047681328,0.00016740232,0.00012048616,0.00037521851,0.000010474278,0.000014883206,0.00043448657],"genre_scores_gemma":[0.9887802,0.00015075192,0.00989728,0.0006259301,0.00006656033,0.00002767777,0.00015358861,0.00003770408,0.00026027777],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880886,0.000082371946,0.00021975828,0.00041168882,0.0001174162,0.00035987567],"domain_scores_gemma":[0.999467,0.000008050535,0.000054099535,0.0002929289,0.000081111415,0.00009681732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058887177,0.0002017968,0.00017012232,0.000048040565,0.00006300252,0.000041102958,0.00012729467,0.00017330122,0.0000331021],"category_scores_gemma":[0.000015819436,0.0002213723,0.000073204115,0.000072722294,0.000081518985,0.000007583871,0.00007390981,0.0001363003,0.000017365854],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017521817,0.0000674871,0.0076606506,0.000036900663,0.000021750944,0.000012663664,0.00022977484,0.0044582835,0.9857023,0.0000427896,0.0006371956,0.0011126756],"study_design_scores_gemma":[0.0054989606,0.0012260709,0.3360545,0.0001153973,0.00015106314,0.00011262398,0.0011693835,0.299396,0.33000088,0.0032380146,0.020236569,0.0028005224],"about_ca_topic_score_codex":0.00018644883,"about_ca_topic_score_gemma":0.0001573845,"teacher_disagreement_score":0.6557014,"about_ca_system_score_codex":0.00004364174,"about_ca_system_score_gemma":0.00002240605,"threshold_uncertainty_score":0.90273005},"labels":[],"label_agreement":null},{"id":"W2096297372","doi":"10.1016/j.molcel.2008.07.015","title":"Caenorhabditis elegans drp-1 and fis-2 Regulate Distinct Cell-Death Execution Pathways Downstream of ced-3 and Independent of ced-9","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":144,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health; Jane Coffin Childs Memorial Fund for Medical Research; National Institute of General Medical Sciences; Burroughs Wellcome Fund","keywords":"Biology; Caenorhabditis elegans; Downstream (manufacturing); Cell biology; Cell; Programmed cell death; Computational biology; Genetics; Apoptosis; Gene","score_opus":0.007245851944776333,"score_gpt":0.18257963865720114,"score_spread":0.1753337867124248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096297372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920657,0.001785512,0.0020007677,0.000021338014,0.00004898918,0.000220866,0.00010810649,0.000011187317,0.0037374941],"genre_scores_gemma":[0.996557,0.0016176198,0.0009773747,0.00005249903,0.000038822567,0.0000072349067,0.00017374867,0.00003788701,0.0005378297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859804,0.00007676488,0.00034411336,0.00047493598,0.00022870042,0.00027741652],"domain_scores_gemma":[0.999158,0.000008375774,0.00016089936,0.00046454792,0.00007361,0.00013456156],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000097224256,0.0002564132,0.00029149372,0.00006250675,0.00008998695,0.000012896936,0.00016285034,0.00022692965,0.000029654455],"category_scores_gemma":[0.00001097562,0.00026733594,0.00010065532,0.00006387142,0.00022925681,0.000005559965,0.00011717481,0.00011041335,0.0000024813692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005704838,0.00015051913,0.004581493,0.00012201604,0.000030803694,0.000040037143,0.0005451538,0.00018816664,0.993241,0.000026157682,0.00015632682,0.000861283],"study_design_scores_gemma":[0.0009327272,0.00047913828,0.014901954,0.000018817147,0.00006963567,0.00006189146,0.00006535611,0.00013832236,0.98132676,0.00013446523,0.0015798506,0.0002911123],"about_ca_topic_score_codex":0.00018592359,"about_ca_topic_score_gemma":0.000025513116,"teacher_disagreement_score":0.011914264,"about_ca_system_score_codex":0.000009104682,"about_ca_system_score_gemma":0.000059061775,"threshold_uncertainty_score":0.9999779},"labels":[],"label_agreement":null},{"id":"W2096814753","doi":"10.1016/j.molcel.2006.02.015","title":"The Conserved Transmembrane Nucleoporin NDC1 Is Required for Nuclear Pore Complex Assembly in Vertebrate Cells","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":229,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Alberta","funders":"","keywords":"Nucleoporin; Nuclear pore; Biology; Cell biology; Biogenesis; Transmembrane protein; RNA interference; Cytosol; Cytoplasm; Nuclear transport; RNA; Biochemistry; Cell nucleus; Gene","score_opus":0.007620049495842346,"score_gpt":0.20637937033658701,"score_spread":0.19875932084074466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096814753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880703,0.0004230811,0.0012396671,0.00088033034,0.00026301033,0.0005239636,0.00004150718,0.000029641213,0.008528517],"genre_scores_gemma":[0.9966784,0.000048078524,0.00074608537,0.0011669013,0.0000942406,0.0000125130755,0.00021970949,0.00006793861,0.00096612977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987961,0.00006157147,0.00027226677,0.00038573905,0.00013365208,0.0003506815],"domain_scores_gemma":[0.9993806,0.000011672166,0.00008475335,0.00040899488,0.00006081512,0.000053155305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014141084,0.00020024028,0.00016514087,0.00003337992,0.00016955505,0.00006593282,0.00023923439,0.00018891189,0.000037720543],"category_scores_gemma":[0.000006821945,0.00017303477,0.00017649552,0.00009994675,0.00008278247,0.000004880062,0.00004091144,0.00009635636,0.000021180882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021476683,0.000048407506,0.000042393352,0.000027180384,0.000019271964,0.00001617327,0.000028214285,0.00007370195,0.9848614,0.000454258,0.013121112,0.0010931394],"study_design_scores_gemma":[0.0013349612,0.0002154219,0.00032505541,0.0000052907185,0.000024313847,0.0000061956725,0.00005872949,0.0012929275,0.6683561,0.00041331453,0.3277403,0.00022736438],"about_ca_topic_score_codex":0.000064600725,"about_ca_topic_score_gemma":0.00007369245,"teacher_disagreement_score":0.31650525,"about_ca_system_score_codex":0.00001644409,"about_ca_system_score_gemma":0.000030397408,"threshold_uncertainty_score":0.70561534},"labels":[],"label_agreement":null},{"id":"W2100020152","doi":"10.1016/s1097-2765(02)00694-9","title":"Asymmetric Sorting of Ash1p in Yeast Results from Inhibition of Translation by Localization Elements in the mRNA","year":2002,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institute of General Medical Sciences","keywords":"Biology; Translation (biology); Messenger RNA; Sorting; Yeast; Cell biology; Genetics; Computational biology; Molecular biology; Gene; Algorithm; Computer science","score_opus":0.013555977255125145,"score_gpt":0.239676435891987,"score_spread":0.22612045863686187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100020152","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890399,0.0010453303,0.007457865,0.000051275954,0.00000799664,0.00016616874,0.00003249082,0.0000012457925,0.0021977394],"genre_scores_gemma":[0.9991213,0.00011946489,0.00033577203,0.00004905285,0.000008621477,0.000005051463,0.0003254897,0.000007390085,0.000027849102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904704,0.00012583901,0.00034513025,0.00015903171,0.00019517295,0.00012775883],"domain_scores_gemma":[0.9996659,0.000013184877,0.00011767927,0.00015477334,0.00003102896,0.000017438773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003055847,0.00006274911,0.000082565064,0.0000955051,0.000012614304,0.0000062029926,0.00008438026,0.00006969424,0.00000649011],"category_scores_gemma":[0.000080958685,0.000056593697,0.000036311456,0.0003234638,0.000019981208,0.0000040977548,0.000015125525,0.00006388731,0.0000012706236],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040808878,0.000113255555,0.0019973386,0.000013694569,0.0000040734003,0.000003644512,0.00012786209,0.00054203253,0.9906026,0.000004074151,0.00016920432,0.006381374],"study_design_scores_gemma":[0.0012920878,0.00010861285,0.0010394902,0.000026168544,0.0000041316157,1.9879498e-7,0.00008950919,0.009006809,0.98802996,0.0000498688,0.00029251288,0.0000606412],"about_ca_topic_score_codex":0.00031069454,"about_ca_topic_score_gemma":0.00009432191,"teacher_disagreement_score":0.010081421,"about_ca_system_score_codex":0.000008929973,"about_ca_system_score_gemma":0.000008197317,"threshold_uncertainty_score":0.2307824},"labels":[],"label_agreement":null},{"id":"W2100796422","doi":"10.1016/j.molcel.2009.06.013","title":"FAK Phosphorylation by ERK Primes Ras-Induced Tyrosine Dephosphorylation of FAK Mediated by PIN1 and PTP-PEST","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":169,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute","keywords":"Dephosphorylation; Phosphorylation; Biology; Cell biology; MAPK/ERK pathway; Tyrosine phosphorylation; Cancer research; PIN1; Focal adhesion; Signal transduction; Proto-oncogene tyrosine-protein kinase Src; PAK1; Biochemistry; Phosphatase","score_opus":0.008087759439446264,"score_gpt":0.2522479728505022,"score_spread":0.24416021341105595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100796422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.982622,0.0070472616,0.00261962,0.0008638784,0.000049737577,0.0008629154,0.000025462965,0.0000786142,0.0058304714],"genre_scores_gemma":[0.99585843,0.0004079714,0.0011551308,0.00053672056,0.000018503473,0.000012709505,0.000600383,0.00005204051,0.0013581006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769515,0.00010738474,0.00048815034,0.0005207641,0.0007825212,0.00040603915],"domain_scores_gemma":[0.99874157,0.00007580511,0.00019070935,0.00045681145,0.00023262281,0.0003024893],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00026898438,0.00028828118,0.00042931605,0.00017498838,0.00007324882,0.00003358565,0.00014090976,0.00025170395,0.00019759605],"category_scores_gemma":[0.00019219774,0.00028382035,0.00010362525,0.00049777626,0.00008533779,0.000078912446,0.000056026132,0.0003182963,0.0000567271],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021378427,0.00034800032,0.0012025192,0.00007180722,0.00002628121,0.000046476212,0.00009639392,0.0000051280713,0.98113114,0.000019498682,0.00712416,0.009714823],"study_design_scores_gemma":[0.0023968911,0.00072451116,0.0067115054,0.00005448475,0.00007688113,0.000009007417,0.000033753866,0.0009559689,0.9830029,0.000048710986,0.005739708,0.00024569168],"about_ca_topic_score_codex":0.000104341976,"about_ca_topic_score_gemma":0.00000169892,"teacher_disagreement_score":0.013236402,"about_ca_system_score_codex":0.000097063385,"about_ca_system_score_gemma":0.000116578194,"threshold_uncertainty_score":0.9999614},"labels":[],"label_agreement":null},{"id":"W2101016966","doi":"10.1016/s1097-2765(04)00209-6","title":"A Cathepsin L Isoform that Is Devoid of a Signal Peptide Localizes to the Nucleus in S Phase and Processes the CDP/Cux Transcription Factor","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":365,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Proteases; Cathepsin; Cathepsin O; Cell biology; Cathepsin B; Cathepsin H; Cathepsin L; Cathepsin S; Cathepsin A; Transcription factor; Biochemistry; Molecular biology; Enzyme; Gene","score_opus":0.011245716960799661,"score_gpt":0.2266190454252266,"score_spread":0.21537332846442694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101016966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9418347,0.0021981387,0.054743547,0.0006030716,0.000023237495,0.0003822914,0.00005639701,0.000005496777,0.00015312526],"genre_scores_gemma":[0.99861753,0.0002854532,0.00018087875,0.0005952777,0.000022817645,0.000026428437,0.00018504285,0.000020446236,0.00006613579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991729,0.000029260864,0.0001845944,0.00025585765,0.00016142073,0.00019592361],"domain_scores_gemma":[0.9996056,0.0000053886442,0.000054234362,0.0002295471,0.000050450824,0.00005476241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011335949,0.00015447123,0.0001276599,0.000037845934,0.00006347864,0.000023341609,0.00017561416,0.000095711875,0.000021000935],"category_scores_gemma":[0.000008509434,0.00010269019,0.00008128328,0.00014548177,0.00008456417,0.000005677034,0.000022164912,0.00008899914,0.0000031325746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014408797,0.0001354147,0.00028205538,0.000073635885,0.00001710835,0.000008714324,0.0022436508,0.00019684181,0.9959061,0.000018487375,0.000015074209,0.0009588184],"study_design_scores_gemma":[0.001136194,0.0003333622,0.00042073932,0.0000286462,0.000033819477,0.000006390451,0.00038485558,0.00004065278,0.9684832,0.00010235224,0.028888345,0.00014142654],"about_ca_topic_score_codex":0.0001874458,"about_ca_topic_score_gemma":0.0005425991,"teacher_disagreement_score":0.056782827,"about_ca_system_score_codex":0.000013017633,"about_ca_system_score_gemma":0.00008214958,"threshold_uncertainty_score":0.41875845},"labels":[],"label_agreement":null},{"id":"W2101885674","doi":"10.1016/j.molcel.2010.05.017","title":"Structure of the Human mTOR Complex I and Its Implications for Rapamycin Inhibition","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":401,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; PI3K/AKT/mTOR pathway; Discovery and development of mTOR inhibitors; Sirolimus; Computational biology; Cell biology; Signal transduction; Biochemistry","score_opus":0.011901742116344842,"score_gpt":0.2646194959987981,"score_spread":0.25271775388245327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101885674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973557,0.0002357977,0.0011886345,0.00023978218,0.0000909606,0.00031892775,0.0001755568,0.000005355787,0.00038926874],"genre_scores_gemma":[0.99857813,0.000003914414,0.0008032613,0.00027505954,0.00008588264,0.00002022731,0.00012811807,0.000019889609,0.000085542204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999464,0.000021918933,0.00012633785,0.00021100836,0.000057411526,0.00011932034],"domain_scores_gemma":[0.99944943,0.000006365382,0.00008823842,0.000319743,0.00009959244,0.000036617454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000047470596,0.00009522138,0.00008103095,0.000017091847,0.00009373788,0.0000106346715,0.00013610686,0.00012268443,0.000021892149],"category_scores_gemma":[0.000025545507,0.00007980482,0.000070164264,0.000048569596,0.00006742094,0.0000016483639,0.00006998863,0.00008465965,3.6008709e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005799435,0.000016056256,0.00037540114,0.000028864466,0.000010544703,8.630066e-8,0.00001515323,0.000016540554,0.9978583,0.00082601554,0.000708319,0.00013894089],"study_design_scores_gemma":[0.00038438934,0.000064042244,0.0037305024,0.000004341543,0.000020829932,0.0000034336215,0.00000411699,0.000021084263,0.9871578,0.0007696255,0.0077456012,0.000094234885],"about_ca_topic_score_codex":0.000003836395,"about_ca_topic_score_gemma":0.00002014889,"teacher_disagreement_score":0.010700481,"about_ca_system_score_codex":0.0000045958245,"about_ca_system_score_gemma":0.00003228581,"threshold_uncertainty_score":0.3254346},"labels":[],"label_agreement":null},{"id":"W2102646127","doi":"10.1016/j.molcel.2005.10.022","title":"Wild-Type and Mutant B-RAF Activate C-RAF through Distinct Mechanisms Involving Heterodimerization","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Melanoma and MAPK Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":421,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Cancer Research UK; Cancer Research Institute","keywords":"Biology; Mutant; Genetics; Wild type; Cell biology; Mutation; Gene","score_opus":0.007918534931107038,"score_gpt":0.20997684267740618,"score_spread":0.20205830774629915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102646127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9443386,0.0010501567,0.051142436,0.000108089596,0.00015840109,0.00019032125,0.00000968872,0.000029447343,0.0029728257],"genre_scores_gemma":[0.99313194,0.0001467771,0.005347722,0.0006314732,0.00012175821,0.000010446023,0.00020109392,0.000042990087,0.0003657991],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988774,0.00006823238,0.00018677715,0.00044653434,0.0001397262,0.00028135127],"domain_scores_gemma":[0.999403,0.0000057696793,0.00008725241,0.00035093285,0.00006297413,0.00009010057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008976748,0.00021443736,0.00015341006,0.000027632432,0.00010454364,0.000041476847,0.00013491591,0.0001622705,0.000026750235],"category_scores_gemma":[0.000041313273,0.00020952019,0.000057324232,0.00010330649,0.000043154556,0.000010640839,0.00014271456,0.000092994705,0.00002416731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036814086,0.000048119397,0.00013131351,0.00002269743,0.000022051021,0.00001757989,0.00008239333,0.000061226114,0.9978448,0.0004152485,0.00012416716,0.0011935731],"study_design_scores_gemma":[0.0004615802,0.00023690773,0.00014923183,0.000011182003,0.000026970616,0.000015965235,0.000028171016,0.00026700337,0.96779716,0.0003103862,0.030433271,0.0002621781],"about_ca_topic_score_codex":0.00001691593,"about_ca_topic_score_gemma":0.000013721799,"teacher_disagreement_score":0.048793305,"about_ca_system_score_codex":0.000013696125,"about_ca_system_score_gemma":0.00004124302,"threshold_uncertainty_score":0.85439855},"labels":[],"label_agreement":null},{"id":"W2105021118","doi":"10.1016/j.molcel.2006.07.004","title":"Type IV Pilus Structure by Cryo-Electron Microscopy and Crystallography: Implications for Pilus Assembly and Functions","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Calcium Carbonate Crystallization and Inhibition","field":"Materials Science","cited_by":416,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Pilus; Biology; Electron microscope; Microscopy; Biophysics; Crystallography; Cell biology; Optics; Genetics; Escherichia coli; Gene; Physics","score_opus":0.004657365396794145,"score_gpt":0.22975505740185473,"score_spread":0.22509769200506058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105021118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9565616,0.0013220477,0.039670948,0.00038898658,0.000102122154,0.00037251314,0.0002833418,0.000070654656,0.0012277653],"genre_scores_gemma":[0.9973942,0.000027839224,0.0014783455,0.00030457473,0.00003530801,0.000027638236,0.0003885012,0.000026133757,0.0003174756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991371,0.000031315976,0.00017085978,0.00034326964,0.00008357549,0.00023384755],"domain_scores_gemma":[0.99955344,0.000021330947,0.00007286928,0.0001689569,0.000114360664,0.000069053065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006190428,0.00014556709,0.00012402491,0.00007491684,0.00020285122,0.00014859038,0.000059698516,0.00009655954,0.00003932345],"category_scores_gemma":[0.000010233682,0.00014956587,0.00003947412,0.00018181393,0.00008495063,0.00009240298,0.00003036366,0.000058632955,0.0000020986547],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021494305,0.000032226184,0.00012681156,0.000027633901,0.0000027716646,4.5111636e-7,0.000015602245,0.000040521183,0.99255925,0.0016017163,0.0055391896,0.00003232558],"study_design_scores_gemma":[0.00076637283,0.00020879047,0.0010833485,0.0000075435782,0.000056579323,0.000012862858,0.000018648143,0.00024015758,0.9506686,0.005064321,0.041600164,0.00027266692],"about_ca_topic_score_codex":0.00006015525,"about_ca_topic_score_gemma":0.000032372325,"teacher_disagreement_score":0.04189071,"about_ca_system_score_codex":0.000028666735,"about_ca_system_score_gemma":0.000024765517,"threshold_uncertainty_score":0.6099119},"labels":[],"label_agreement":null},{"id":"W2106253711","doi":"10.1016/j.molcel.2012.10.017","title":"Mitosis-Specific Regulation of Nuclear Transport by the Spindle Assembly Checkpoint Protein Mad1p","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Innovates - Health Solutions; Howard Hughes Medical Institute","keywords":"Biology; Mitosis; Cell biology; Nuclear transport; Spindle checkpoint; Nuclear protein; Nuclear pore; Spindle apparatus; Cell nucleus; Genetics; Cell division; Cell; Transcription factor; Gene; Nucleus","score_opus":0.005476405531508387,"score_gpt":0.19277068593595403,"score_spread":0.18729428040444565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106253711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870271,0.0030267644,0.005364656,0.00013312511,0.00008159367,0.0004141577,0.00002131273,0.000011004698,0.003920253],"genre_scores_gemma":[0.99768984,0.00007196436,0.0010022274,0.00017162805,0.00009302428,0.000023517958,0.0001718358,0.000047457772,0.0007285011],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895114,0.00006615227,0.00026707747,0.000244935,0.00017066654,0.00030004626],"domain_scores_gemma":[0.9992152,0.0000023927557,0.00012874466,0.00052250957,0.000053474545,0.000077684315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020800433,0.0001741212,0.00014361355,0.0000197436,0.00006410133,0.000011158302,0.00024025375,0.0001827107,0.00004439693],"category_scores_gemma":[0.000004717441,0.00014606316,0.00017776524,0.000087917586,0.0000716365,0.0000060568973,0.00004998277,0.00010470537,0.000022837889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003092848,0.00020054643,0.00034730864,0.000028544055,0.0000288604,6.143554e-7,0.00007937982,0.000015506048,0.9962076,0.00017797828,0.0023622545,0.0005204674],"study_design_scores_gemma":[0.00027422674,0.000091309485,0.0017630723,0.000009932388,0.00002636446,0.0000038518397,0.000046945428,0.000021195197,0.86248475,0.000012597386,0.13510847,0.00015730053],"about_ca_topic_score_codex":0.000016656963,"about_ca_topic_score_gemma":0.0000024822873,"teacher_disagreement_score":0.13372287,"about_ca_system_score_codex":0.000012393711,"about_ca_system_score_gemma":0.00002299623,"threshold_uncertainty_score":0.59562826},"labels":[],"label_agreement":null},{"id":"W2106318552","doi":"10.1016/j.molcel.2015.08.013","title":"Mitochondrial Phosphoenolpyruvate Carboxykinase Regulates Metabolic Adaptation and Enables Glucose-Independent Tumor Growth","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":292,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Terry Fox Foundation; Canadian Institutes of Health Research; Cancer Research Society; Cancer Research UK; Wellcome Trust; McGill University","keywords":"Biology; Phosphoenolpyruvate carboxykinase; Glutamine; Cell growth; Citric acid cycle; Gluconeogenesis; Biochemistry; Metabolic pathway; Glycolysis; Glutaminolysis; Anaerobic glycolysis; Carbohydrate metabolism; Glucose uptake; Cell biology; Metabolism; Endocrinology; Amino acid; Enzyme; Insulin","score_opus":0.009712290056166513,"score_gpt":0.205708239749179,"score_spread":0.1959959496930125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106318552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9453201,0.0491741,0.0019109712,0.00007416096,0.0013308792,0.00036309307,0.000026618565,0.000032211214,0.0017678296],"genre_scores_gemma":[0.9935868,0.0013642415,0.0025551876,0.0003990488,0.0009723372,0.000058631656,0.00014209506,0.00006590122,0.0008557872],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829984,0.00010706125,0.00026904928,0.0006026673,0.00031477242,0.00040662196],"domain_scores_gemma":[0.9989178,0.000006046205,0.00013242058,0.00042655913,0.0002082571,0.00030891388],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017846582,0.00030265257,0.00029231413,0.00007882894,0.00007577086,0.00007372681,0.00020049146,0.00015813934,0.000009782017],"category_scores_gemma":[0.00007563347,0.00030310947,0.00012798388,0.000134066,0.000090948495,0.000011798422,0.00015698603,0.000120744764,0.000014267467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002072564,0.000074965916,0.00008129156,0.000024782368,0.000056825254,0.000024163952,0.0002210878,0.00019381409,0.9955271,0.00027762903,0.0017573204,0.0015537557],"study_design_scores_gemma":[0.0020371983,0.00014294696,0.00019837053,0.000007409328,0.000107373875,0.000025884903,0.00020139989,0.00015385318,0.85126084,0.0004012782,0.14513011,0.0003333511],"about_ca_topic_score_codex":0.00045028186,"about_ca_topic_score_gemma":0.000073971285,"teacher_disagreement_score":0.14426629,"about_ca_system_score_codex":0.000018820325,"about_ca_system_score_gemma":0.00020684005,"threshold_uncertainty_score":0.9999421},"labels":[],"label_agreement":null},{"id":"W2107513374","doi":"10.1016/j.molcel.2010.11.020","title":"Intronic miR-211 Assumes the Tumor Suppressive Function of Its Host Gene in Melanoma","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":278,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Universitätsspital Zürich; McGill University","keywords":"Biology; Melanoma; Function (biology); Host (biology); Gene; Genetics; Cancer research; Computational biology","score_opus":0.003161436852259465,"score_gpt":0.1989850251906524,"score_spread":0.19582358833839292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107513374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99616814,0.002013283,0.00049216015,0.00010813868,0.00017100683,0.0002836241,0.000019810197,0.0000059157037,0.0007379102],"genre_scores_gemma":[0.9992897,0.000019918769,0.00019009032,0.00012445479,0.00006819625,0.000030035915,0.000115962226,0.000023951741,0.00013769147],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991384,0.00008036264,0.00019747853,0.0002629888,0.00012810282,0.00019267252],"domain_scores_gemma":[0.99930364,0.000007128282,0.00012463139,0.00043803325,0.00008073026,0.000045818102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013040699,0.00013338595,0.00011428195,0.00004508152,0.000031700114,0.000013716888,0.00020975606,0.0001183405,0.000070661736],"category_scores_gemma":[0.00004406902,0.00011169126,0.00009209114,0.00009065327,0.00006588745,0.0000038413245,0.00009874902,0.00013694676,0.000016813905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060213868,0.000063572894,0.0006810124,0.00002260116,0.000017880257,0.000008498789,0.000018519651,0.000099354715,0.9983568,0.00008557771,0.00033244927,0.00025352763],"study_design_scores_gemma":[0.00047635834,0.000088381625,0.0102376845,0.000006056429,0.000030310533,0.0000072534363,0.00001741729,0.00014287487,0.9795531,0.00005062647,0.009267788,0.00012212544],"about_ca_topic_score_codex":0.000012922617,"about_ca_topic_score_gemma":0.00004756362,"teacher_disagreement_score":0.01880367,"about_ca_system_score_codex":0.000010775683,"about_ca_system_score_gemma":0.00007729934,"threshold_uncertainty_score":0.45546374},"labels":[],"label_agreement":null},{"id":"W2109206414","doi":"10.1016/j.molcel.2007.01.010","title":"Execution of the Circadian Negative Feedback Loop in Neurospora Requires the ATP-Dependent Chromatin-Remodeling Enzyme CLOCKSWITCH","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":125,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; National Institutes of Health","keywords":"Biology; Chromatin; Chromatin remodeling; Chromatin immunoprecipitation; Cell biology; Neurospora; Chromatin structure remodeling (RSC) complex; Nucleosome; Circadian clock; Histone; Histone code; Genetics; Neurospora crassa; Gene; Molecular biology; Gene expression; Promoter; Mutant","score_opus":0.01675765874695892,"score_gpt":0.23764929012662858,"score_spread":0.22089163137966966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109206414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879431,0.00037048224,0.0021404515,0.0007028515,0.00039304685,0.0005617602,0.0000072710623,0.000030882293,0.007850153],"genre_scores_gemma":[0.9979885,0.00002902075,0.00006289668,0.001313312,0.00004899406,0.0000083692,9.964754e-7,0.00003567382,0.00051223347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99785393,0.00021098473,0.00046906734,0.00046016194,0.0005154914,0.0004903657],"domain_scores_gemma":[0.99877644,0.00018596348,0.0002444533,0.0006497743,0.00004387972,0.00009950966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005326519,0.00020864538,0.0001986636,0.000107310676,0.00016562361,0.000043012875,0.0005162148,0.000117964584,0.000023702365],"category_scores_gemma":[0.000264599,0.00014915875,0.00015089796,0.0005213915,0.0002740098,0.00010809991,0.00014092065,0.00040973147,0.000039329178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024171415,0.00006555833,0.0005352703,0.00002033116,0.0000015597382,0.00010772065,0.0016827679,0.0025918102,0.99028987,0.0038670881,0.000031807274,0.00078205933],"study_design_scores_gemma":[0.0005258659,0.00003373142,0.0059112757,0.00004868738,0.000012527241,0.00003077377,0.00036084527,0.0023787383,0.9895546,0.00037072497,0.0006067123,0.00016555468],"about_ca_topic_score_codex":0.0002643974,"about_ca_topic_score_gemma":0.000079971214,"teacher_disagreement_score":0.010045403,"about_ca_system_score_codex":0.000097102085,"about_ca_system_score_gemma":0.00009849217,"threshold_uncertainty_score":0.60825175},"labels":[],"label_agreement":null},{"id":"W2109311268","doi":"10.1016/j.molcel.2014.02.031","title":"SUMO Chain-Induced Dimerization Activates RNF4","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; University of Ottawa; Cancer Research UK; Wellcome Trust; GlaxoSmithKline","keywords":"Biology; Cell biology; RNF4; Genetics; Computational biology; Transcription factor; Gene","score_opus":0.007259196639162318,"score_gpt":0.21074414267789857,"score_spread":0.20348494603873624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109311268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95338714,0.00019024349,0.019444961,0.00011465417,0.00012829804,0.00019513148,0.0000042394754,0.000032060216,0.026503285],"genre_scores_gemma":[0.9975141,0.000019321744,0.00064629153,0.00068486895,0.0001636552,0.000028627059,0.00016031573,0.000040048722,0.00074276107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990387,0.00011090241,0.00013294302,0.0003395153,0.00012527287,0.00025268702],"domain_scores_gemma":[0.9993869,0.00000722659,0.00006801474,0.00039456482,0.000049451584,0.00009384369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014379431,0.00016387121,0.00011439397,0.000035539902,0.00007147811,0.000027934248,0.00017761945,0.000153323,0.00003895161],"category_scores_gemma":[0.00006380807,0.00016596066,0.000086278,0.000083997584,0.000026874011,0.0000025621373,0.00008559291,0.00008515017,0.000070353235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001707013,0.000039525843,0.00014163274,0.00001764705,0.000011630491,0.0000023178445,0.000026198324,0.000025043562,0.9957439,0.00029926506,0.00017329586,0.0035024749],"study_design_scores_gemma":[0.0003392077,0.0002036735,0.00011601826,0.000006128849,0.000009635966,0.0000026139637,0.0000107913775,0.00015736658,0.95624256,0.00016024812,0.042541344,0.00021039114],"about_ca_topic_score_codex":0.000011111423,"about_ca_topic_score_gemma":0.000001862873,"teacher_disagreement_score":0.044126984,"about_ca_system_score_codex":0.000007037448,"about_ca_system_score_gemma":0.000029346524,"threshold_uncertainty_score":0.67676795},"labels":[],"label_agreement":null},{"id":"W2112732536","doi":"10.1016/j.molcel.2012.06.037","title":"The Signaling Adaptor Gab1 Regulates Cell Polarity by Acting as a PAR Protein Scaffold","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; U.S. Public Health Service","keywords":"Cell polarity; Cell biology; Signal transducing adaptor protein; Biology; Polarity (international relations); Scaffold protein; Epithelial polarity; Signal transduction; Cell; Biochemistry","score_opus":0.006171242315690409,"score_gpt":0.2080545228275473,"score_spread":0.2018832805118569,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112732536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851294,0.0077944025,0.0019103327,0.00014881844,0.00012917817,0.00038918376,0.000024785017,0.000042991625,0.004430867],"genre_scores_gemma":[0.9955328,0.000039909515,0.0012318275,0.00028150715,0.00025430013,0.000051472,0.00011045821,0.00007379054,0.0024239377],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99792594,0.00024754362,0.00029956782,0.00044373755,0.00029663788,0.0007865689],"domain_scores_gemma":[0.9988382,0.000030099485,0.00017642447,0.0006098813,0.000081724225,0.00026369828],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000705346,0.0003140597,0.000185612,0.000028729246,0.0004555842,0.00010446819,0.00038482115,0.0002834931,0.000021308762],"category_scores_gemma":[0.00008198594,0.00026069462,0.00020840816,0.00011994824,0.00009674414,0.000009586951,0.00015898424,0.00024225817,0.00006851141],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004917506,0.00012131611,0.0002348635,0.000029534056,0.00003173033,0.000006518951,0.000093026305,0.000025427762,0.9984745,0.000029293618,0.00044352136,0.00046109973],"study_design_scores_gemma":[0.0003341654,0.00015434188,0.000009126674,0.000021160362,0.00003150414,0.0000056223867,0.00014116206,0.00004918231,0.92519695,0.00005165802,0.073670305,0.00033482377],"about_ca_topic_score_codex":0.00008594008,"about_ca_topic_score_gemma":0.0000032448922,"teacher_disagreement_score":0.07327754,"about_ca_system_score_codex":0.000023370998,"about_ca_system_score_gemma":0.00008955108,"threshold_uncertainty_score":0.9999845},"labels":[],"label_agreement":null},{"id":"W2113832037","doi":"10.1016/j.molcel.2005.06.006","title":"Crystal Structure of Bacteriophage λcII and Its DNA Complex","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences","keywords":"Biology; RNA polymerase; Transcription (linguistics); Molecular biology; Protein subunit; Bacteriophage; Polymerase; DNA; RNA polymerase I; RNA polymerase II; RNA; Sigma factor; Specificity factor; Promoter; RNA-dependent RNA polymerase; Genetics; Gene; Gene expression; Escherichia coli","score_opus":0.006839842514284991,"score_gpt":0.20749309952719341,"score_spread":0.20065325701290843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113832037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950082,0.0016344574,0.0011872239,0.000067764915,0.00003109773,0.00015416116,0.000046668054,0.000006723934,0.0018637098],"genre_scores_gemma":[0.99619555,0.00005263437,0.003018109,0.00023456238,0.000070897,0.000003022207,0.000055391218,0.0000232736,0.0003465617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992744,0.000051699084,0.00015281886,0.00024749862,0.00010425641,0.0001693639],"domain_scores_gemma":[0.9995844,0.0000035138971,0.000072500865,0.0002303346,0.000038130573,0.00007114511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000048875867,0.00014083865,0.00014174146,0.000026891292,0.000034993125,0.00001317636,0.00013353057,0.00012984769,0.00014736848],"category_scores_gemma":[0.000013145198,0.00013670397,0.00006363189,0.000036469177,0.000030462943,0.0000029213445,0.00009080596,0.000044335782,0.0000056791937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026276364,0.000022645003,0.000018388815,0.000035336445,0.00001653436,0.0000045271267,0.000025100997,0.00001474414,0.997895,0.00009566638,0.00008297789,0.0017628135],"study_design_scores_gemma":[0.00032245042,0.00012949006,0.00023455877,0.000006062999,0.00001448185,0.000011170072,0.000011466757,0.0000373611,0.97852176,0.00005031846,0.020515202,0.0001456786],"about_ca_topic_score_codex":0.000002063195,"about_ca_topic_score_gemma":0.000003431063,"teacher_disagreement_score":0.020432224,"about_ca_system_score_codex":0.0000040183713,"about_ca_system_score_gemma":0.000018906994,"threshold_uncertainty_score":0.5574626},"labels":[],"label_agreement":null},{"id":"W2115900546","doi":"10.1016/j.molcel.2004.11.047","title":"Crystal Structure of the Ligand Binding Suppressor Domain of Type 1 Inositol 1,4,5-Trisphosphate Receptor","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":152,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; Ministry of Education, Culture, Sports, Science and Technology; Heart and Stroke Foundation of Canada","keywords":"Biology; Inositol; Cell biology; Inositol trisphosphate receptor; Endoplasmic reticulum; Calmodulin; Receptor; Binding site; Biophysics; Protein structure; Helix (gastropod); Plasma protein binding; Biochemistry","score_opus":0.003562297036127554,"score_gpt":0.19334394318099046,"score_spread":0.1897816461448629,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115900546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967534,0.0011626129,0.0012260907,0.00006523242,0.00015097509,0.00018270826,0.000059315204,0.000004243057,0.00039544175],"genre_scores_gemma":[0.99800533,0.00005154762,0.0010958536,0.00004194129,0.00005795826,0.0000012732484,0.0004562917,0.000021818963,0.00026796374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991821,0.0000415654,0.00023533638,0.00020609314,0.00017227208,0.00016261433],"domain_scores_gemma":[0.9993966,0.0000034112588,0.00013712815,0.00034503045,0.00007542673,0.00004235372],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006187587,0.00013276041,0.0001470433,0.000028183491,0.000039437695,0.000006629025,0.00022205438,0.00016687189,0.00006361468],"category_scores_gemma":[0.000009398429,0.00010638067,0.00014244535,0.00013302489,0.00007691227,0.0000032411406,0.000056766192,0.00009101561,0.0000024731569],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009124244,0.000040851428,0.0020948246,0.000044679768,0.000028805203,0.0000011455988,0.000106907646,0.00017231697,0.997171,0.000033123146,0.00013498953,0.00008011867],"study_design_scores_gemma":[0.00046544566,0.00008600536,0.00030561854,0.000016440223,0.000029308476,0.0000020128984,0.000032239433,0.000016702508,0.9669788,0.000021190133,0.031930737,0.00011551983],"about_ca_topic_score_codex":0.000010070782,"about_ca_topic_score_gemma":0.000011986677,"teacher_disagreement_score":0.031795748,"about_ca_system_score_codex":0.000007921791,"about_ca_system_score_gemma":0.000046295543,"threshold_uncertainty_score":0.43380776},"labels":[],"label_agreement":null},{"id":"W2116239679","doi":"10.1016/j.molcel.2006.05.007","title":"Structure of the Tfb1/p53 Complex: Insights into the Interaction between the p62/Tfb1 Subunit of TFIIH and the Activation Domain of p53","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":204,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Université de Montréal","funders":"National Institutes of Health; Fonds Québécois de la Recherche sur la Nature et les Technologies; Terry Fox Foundation; National Institute of General Medical Sciences; Canada Research Chairs","keywords":"Biology; Transcription factor II H; Protein subunit; Cell biology; Domain (mathematical analysis); Computational biology; Genetics; DNA repair; DNA; Gene","score_opus":0.006816320834343124,"score_gpt":0.21821148125087797,"score_spread":0.21139516041653483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116239679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99184525,0.00074417325,0.0022606638,0.0017067374,0.000110197376,0.0009064363,0.000012335105,0.0000104999335,0.0024036933],"genre_scores_gemma":[0.9993466,0.000027831256,0.00015464622,0.00026707558,0.00007375206,0.000008693411,0.0000431413,0.00002965805,0.000048599093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983523,0.00040201785,0.0004568128,0.00020470194,0.00043471082,0.00014945549],"domain_scores_gemma":[0.9983251,0.00020079756,0.0004939463,0.0007753696,0.0001763919,0.000028376266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023933614,0.0001893019,0.00033821934,0.0000774046,0.00013667058,0.000013922497,0.00029507742,0.00013153968,0.000028028388],"category_scores_gemma":[0.00006456806,0.00008632414,0.00018860662,0.0004119356,0.0005776604,0.00004187937,0.00013512226,0.00042895353,9.50801e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027211552,0.000049929804,0.00076274667,0.00010276455,0.00013133943,0.0000026773935,0.0025453605,0.000437572,0.9920607,0.0023843753,0.00027943126,0.00097097334],"study_design_scores_gemma":[0.002273907,0.00013908833,0.017344285,0.00013263273,0.0003392218,0.000011520465,0.0006891315,0.000375806,0.9668171,0.0068825763,0.0048927204,0.000102050115],"about_ca_topic_score_codex":0.001438451,"about_ca_topic_score_gemma":0.00016585218,"teacher_disagreement_score":0.025243653,"about_ca_system_score_codex":0.00006321358,"about_ca_system_score_gemma":0.00007976314,"threshold_uncertainty_score":0.3520196},"labels":[],"label_agreement":null},{"id":"W2118656013","doi":"10.1016/s1097-2765(04)00062-0","title":"PML Is a Direct p53 Target that Modulates p53 Effector Functions","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Retinoids in leukemia and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":300,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Cancer Institute; National Institute on Aging","keywords":"Biology; Effector; Promyelocytic leukemia protein; Cell biology; Transcription factor; Suppressor; Mediator; Cell cycle checkpoint; Gene; Transcription (linguistics); Tumor suppressor gene; DNA damage; Cancer research; Reporter gene; Cell cycle; Nuclear protein; DNA; Gene expression; Genetics; Carcinogenesis","score_opus":0.004829362974195094,"score_gpt":0.20315513698294418,"score_spread":0.1983257740087491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118656013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9320346,0.007818199,0.02933147,0.00020717748,0.0003753873,0.0003413955,0.000060816434,0.00007574794,0.029755194],"genre_scores_gemma":[0.9923815,0.00022735652,0.0018957958,0.0008312975,0.00017027438,0.00006462565,0.00036404698,0.00007576617,0.0039893044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983431,0.00006875881,0.0002076946,0.000669451,0.00025779125,0.00045318226],"domain_scores_gemma":[0.998998,0.000009982995,0.00009345028,0.0006541563,0.00008667883,0.0001577525],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013314499,0.0003352493,0.00023547688,0.00006304684,0.00015514453,0.00006526006,0.00031602167,0.00028545613,0.0001297567],"category_scores_gemma":[0.00003484831,0.00032119846,0.00027330007,0.00017503968,0.00010608205,0.0000074143527,0.00014221348,0.00017244236,0.00031268992],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003777545,0.00012873688,0.00086841016,0.00008647833,0.00009069292,0.00005322838,0.00006480422,0.001539269,0.994264,0.00001871378,0.0024681538,0.00037974172],"study_design_scores_gemma":[0.00082410866,0.00024304482,0.00009261355,0.000019633684,0.00006002376,0.000016602584,0.00003365809,0.000040715113,0.9051837,0.0002241363,0.092887,0.00037477096],"about_ca_topic_score_codex":0.00003906042,"about_ca_topic_score_gemma":0.000002574902,"teacher_disagreement_score":0.090418845,"about_ca_system_score_codex":0.0000454821,"about_ca_system_score_gemma":0.00014615779,"threshold_uncertainty_score":0.999924},"labels":[],"label_agreement":null},{"id":"W2130441538","doi":"10.1016/j.molcel.2011.07.008","title":"Direct Membrane Binding by Bacterial Actin MreB","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":252,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Petroleum Technology Alliance Canada","keywords":"MreB; Membrane curvature; Biology; Actin; Membrane; Cytoskeleton; Cell biology; Cell membrane; Biophysics; Protein filament; Cell; Biochemistry; Lipid bilayer","score_opus":0.007749799330710829,"score_gpt":0.19131145831792623,"score_spread":0.1835616589872154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130441538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96908617,0.00029718614,0.0003252603,0.000044870052,0.0005049185,0.0001617513,0.000049727492,0.000037221605,0.029492902],"genre_scores_gemma":[0.99591297,0.00013380984,0.0013557005,0.00015444575,0.00014231369,0.000014972327,0.00026712177,0.00004991199,0.0019687712],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987813,0.000063656276,0.0002017188,0.0004779677,0.00009888959,0.00037642007],"domain_scores_gemma":[0.99930125,0.0000029017806,0.00009047752,0.00046679846,0.000035906498,0.00010267042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011115558,0.00022714099,0.00018176578,0.00004851407,0.000062229905,0.00002770693,0.00032160882,0.0004062829,0.00029312825],"category_scores_gemma":[0.000020525376,0.00022476901,0.000115673174,0.0000886064,0.000084405816,0.000001968112,0.00019301346,0.00010874759,0.000077869656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092355396,0.00009380396,0.000056703968,0.00001047001,0.00003473368,0.000015261636,0.000019064311,5.1015377e-7,0.9961343,0.000012225431,0.002622905,0.00090766227],"study_design_scores_gemma":[0.0004110167,0.000272576,0.00002696703,0.000003344297,0.00002132984,0.0000048083125,0.0000114829245,0.0000021984092,0.8310945,0.0000067398037,0.16790159,0.00024344183],"about_ca_topic_score_codex":0.00004188141,"about_ca_topic_score_gemma":0.000007502204,"teacher_disagreement_score":0.16527867,"about_ca_system_score_codex":0.000009594332,"about_ca_system_score_gemma":0.000034557273,"threshold_uncertainty_score":0.91658145},"labels":[],"label_agreement":null},{"id":"W2131574750","doi":"10.1016/j.molcel.2004.07.014","title":"Crystal Structure of Archaeal Recombinase RadA","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":129,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Recombinase; RAD51; Biology; DNA; Protein filament; Homologous recombination; Helix (gastropod); Biophysics; Cell biology; Methanococcus; Escherichia coli; Molecular biology; Genetics; Recombination; Gene","score_opus":0.00353024027203681,"score_gpt":0.1981811394821132,"score_spread":0.1946508992100764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131574750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988944,0.00037531287,0.00847083,0.000045835055,0.0001339217,0.00016016337,0.000030636562,0.000014862756,0.0018244156],"genre_scores_gemma":[0.9912801,0.000014842134,0.008119185,0.00018239443,0.000035749017,0.000003105434,0.00011113474,0.00003362584,0.00021988813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908805,0.00003852139,0.00017612279,0.00030864505,0.00016246963,0.00022617435],"domain_scores_gemma":[0.99932736,0.0000021365504,0.00007893714,0.00045068443,0.000052823038,0.00008803974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000051401825,0.00015457075,0.00014023446,0.000039002647,0.000026348516,0.00000712393,0.0002094552,0.0001478188,0.000035445624],"category_scores_gemma":[0.00002103111,0.00015942958,0.00012858583,0.000076835284,0.000058398833,0.0000018438506,0.00012875564,0.00008929777,0.000005731088],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035316727,0.00006938408,0.000034196943,0.000030353927,0.00002096056,0.000036123027,0.000036898407,0.00040894197,0.99852127,0.00050258375,0.00006655189,0.0002374461],"study_design_scores_gemma":[0.00095998915,0.00037021027,0.00003065379,0.000008510106,0.000015425496,0.000020347767,0.000028342183,0.000006033239,0.99275553,0.0029045912,0.0027322453,0.00016812737],"about_ca_topic_score_codex":0.000032137566,"about_ca_topic_score_gemma":0.000014707819,"teacher_disagreement_score":0.0057657184,"about_ca_system_score_codex":0.000015788348,"about_ca_system_score_gemma":0.0000900726,"threshold_uncertainty_score":0.6501349},"labels":[],"label_agreement":null},{"id":"W2131632095","doi":"10.1016/s1097-2765(03)00105-9","title":"An Integrated Stress Response Regulates Amino Acid Metabolism and Resistance to Oxidative Stress","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3314,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Regional Cancer Foundation","funders":"National Institute of Environmental Health Sciences; National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Biology; Oxidative stress; Cell biology; Metabolism; Fight-or-flight response; Amino acid; Stress (linguistics); Biochemistry; Gene","score_opus":0.0039169883285900845,"score_gpt":0.22191174611267867,"score_spread":0.21799475778408858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131632095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990445,0.003678527,0.0032340582,0.000080498314,0.00007173575,0.00028547482,0.00024431173,0.000023286913,0.0019370902],"genre_scores_gemma":[0.993162,0.00009384818,0.005228809,0.00033887068,0.00002491778,0.00004643296,0.00019853002,0.00003871642,0.00086792413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804926,0.0004699671,0.00022790328,0.0006858955,0.0001948435,0.00037214582],"domain_scores_gemma":[0.99866986,0.000017404811,0.000080802056,0.0006944728,0.00014201354,0.00039545415],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001951013,0.00030042382,0.00022572232,0.000079017795,0.00010103385,0.00008489108,0.00022925092,0.00015292667,0.000027675896],"category_scores_gemma":[0.00022471102,0.0002825859,0.00007978031,0.0001678691,0.00011242041,0.000009503953,0.0000708984,0.00010555013,0.000008054846],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007559029,0.00015922631,0.00078434974,0.000029929703,0.000036273537,0.00007921808,0.00012722824,0.00014201674,0.99685615,0.000462535,0.0003481537,0.00021899941],"study_design_scores_gemma":[0.00071531686,0.00018514323,0.0015844097,0.00003069719,0.000045244342,0.0000034202442,0.00041244272,0.0000132309,0.9753329,0.00010980771,0.02121397,0.000353415],"about_ca_topic_score_codex":0.000017090257,"about_ca_topic_score_gemma":0.000048180835,"teacher_disagreement_score":0.021523265,"about_ca_system_score_codex":0.000014041246,"about_ca_system_score_gemma":0.00009055697,"threshold_uncertainty_score":0.9999626},"labels":[],"label_agreement":null},{"id":"W2134091981","doi":"10.1016/j.molcel.2007.05.016","title":"Local Activation of Yeast ASH1 mRNA Translation through Phosphorylation of Khd1p by the Casein Kinase Yck1p","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":139,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Messenger RNA; Casein kinase 2; Translation (biology); Translational regulation; P-bodies; RNA; Phosphorylation; Molecular biology; Protein kinase A; Genetics; Gene; Mitogen-activated protein kinase kinase","score_opus":0.01067339483224318,"score_gpt":0.25638414965852824,"score_spread":0.24571075482628507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134091981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7424037,0.00079930393,0.25493738,0.00008039657,0.00002096243,0.00015829886,0.000009468228,0.000002826741,0.0015876944],"genre_scores_gemma":[0.9988654,0.000051503237,0.0006287998,0.000072149094,0.000029172243,0.0000039308566,0.00013638803,0.000015124274,0.00019747889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991465,0.000056253648,0.00022130313,0.00016865427,0.00023130445,0.00017594764],"domain_scores_gemma":[0.99950707,0.000014139002,0.00010725575,0.00024263945,0.0000905807,0.000038329617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029926884,0.00009388513,0.000094402225,0.000025751719,0.00004137766,0.000006119236,0.00011755507,0.00010738209,0.000011953792],"category_scores_gemma":[0.000018972913,0.000078450335,0.000083015104,0.00013279899,0.00008754687,0.0000063068746,0.000021971777,0.000080878934,0.0000019425154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014757062,0.00006323046,0.00009208018,0.000025718688,0.000016545699,0.0000028329973,0.00008975983,0.00031438004,0.98226535,0.00004957513,0.00026228765,0.016670676],"study_design_scores_gemma":[0.00046695562,0.00017087186,0.0002935743,0.000009212448,0.000010510193,0.0000016251233,0.00017160198,0.00051705766,0.9935294,0.00003558254,0.0047162673,0.000077344244],"about_ca_topic_score_codex":0.00023990603,"about_ca_topic_score_gemma":0.000022752796,"teacher_disagreement_score":0.2564618,"about_ca_system_score_codex":0.0000138350715,"about_ca_system_score_gemma":0.000039281287,"threshold_uncertainty_score":0.31991118},"labels":[],"label_agreement":null},{"id":"W2135785842","doi":"10.1016/j.molcel.2010.10.024","title":"The MMS22L-TONSL Complex Mediates Recovery from Replication Stress and Homologous Recombination","year":2010,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":142,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Canada Research Chairs; Ontario Institute for Cancer Research; University Health Network; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Homologous recombination; RAD51; Control of chromosome duplication; Replication protein A; Origin recognition complex; DNA replication; Eukaryotic DNA replication; DNA re-replication; DNA repair; Genetics; Replication factor C; Minichromosome maintenance; Homologous chromosome; Cell biology; Pre-replication complex; Topoisomerase; DNA; DNA damage; DNA-binding protein; Gene","score_opus":0.0057626845787740666,"score_gpt":0.21727662976311796,"score_spread":0.21151394518434388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135785842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944848,0.00060195284,0.0017515906,0.0003972342,0.0003153081,0.00022896127,0.000036963,0.000029166784,0.002154054],"genre_scores_gemma":[0.9950322,0.0002449521,0.003337613,0.00022997969,0.00007566974,0.000043036365,0.0005617368,0.000028204708,0.0004465988],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989735,0.00008825969,0.00017404335,0.000458863,0.000121229714,0.00018410466],"domain_scores_gemma":[0.99883056,0.00004348036,0.00011008268,0.0008731836,0.00007416729,0.00006855566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024484986,0.00013519276,0.00009468307,0.000022258917,0.00014218163,0.00006289654,0.00025009335,0.00018154879,0.000021041602],"category_scores_gemma":[0.00017407836,0.00011599836,0.000058845144,0.00004877198,0.00009244662,0.000004190431,0.00014618199,0.00014174997,0.000014416429],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020796688,0.00003834565,0.00031778132,0.0000045435095,0.000020336347,0.0000041870976,0.000015884376,0.000004390002,0.98810416,0.00020694238,0.000542726,0.010719874],"study_design_scores_gemma":[0.00030433727,0.00012598177,0.0019288263,0.000003156427,0.000019683963,0.0000056997974,0.000031629053,0.00018875324,0.9805094,0.0036756855,0.013054186,0.00015263847],"about_ca_topic_score_codex":0.000053264266,"about_ca_topic_score_gemma":0.00011656221,"teacher_disagreement_score":0.01251146,"about_ca_system_score_codex":0.00000707928,"about_ca_system_score_gemma":0.000029817524,"threshold_uncertainty_score":0.4730276},"labels":[],"label_agreement":null},{"id":"W2136768093","doi":"10.1016/s1097-2765(00)80269-5","title":"Structural Basis for Specificity Switching of the Src SH2 Domain","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"","keywords":"SH2 domain; GRB2; Biology; Proto-oncogene tyrosine-protein kinase Src; Tryptophan; Peptide; Amino acid; Mutant; Binding site; Biochemistry; Plasma protein binding; Binding domain; Biophysics; Peptide sequence; Domain (mathematical analysis); Stereochemistry; Computational biology; Signal transduction; Chemistry; Gene","score_opus":0.00721119397479837,"score_gpt":0.21637760889703908,"score_spread":0.20916641492224072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136768093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98546594,0.0004763698,0.010782433,0.00012590925,0.000052890875,0.00030627905,0.000016950376,0.000006283464,0.0027669128],"genre_scores_gemma":[0.99566126,0.000007935124,0.0036430855,0.00021765295,0.00007483537,0.000012344705,0.000019518062,0.000018075418,0.00034531785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926245,0.000056382185,0.00017392977,0.00021828878,0.00012334534,0.00016559637],"domain_scores_gemma":[0.9995094,0.00000599515,0.00006860216,0.0003355327,0.000040370513,0.000040114675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121443976,0.00011388354,0.00010329447,0.000016233296,0.00009320836,0.0000132613695,0.00018455394,0.00008725424,0.00012089944],"category_scores_gemma":[0.000017436907,0.00008911484,0.00019335274,0.00007034883,0.00003027109,0.0000019153151,0.000040950137,0.00005405661,0.0000026208925],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050245006,0.000013328579,0.00010765915,0.000022465954,0.000012936777,0.0000011171593,0.000033357246,0.00081739936,0.9947932,0.00021767254,0.000081275,0.0038493401],"study_design_scores_gemma":[0.00038147674,0.00004546917,0.0004109314,0.000012430992,0.000013211992,0.0000029907485,0.000020215257,0.00033216208,0.9810046,0.00072735,0.016930254,0.00011889337],"about_ca_topic_score_codex":0.000010731988,"about_ca_topic_score_gemma":0.000004373608,"teacher_disagreement_score":0.016848978,"about_ca_system_score_codex":0.0000093528115,"about_ca_system_score_gemma":0.00003378937,"threshold_uncertainty_score":0.36339977},"labels":[],"label_agreement":null},{"id":"W2140345256","doi":"10.1016/j.molcel.2013.11.003","title":"DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":567,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec; University of Toronto","funders":"National Institute of General Medical Sciences; National Institute for Health and Care Research; Canadian Institutes of Health Research; National Cancer Institute; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Wellcome Trust","keywords":"Biology; Exonuclease; Rad50; Nuclease; DNA repair; Replication protein A; Homologous recombination; Endonuclease; Non-homologous end joining; Chromatin; Cell biology; DNA repair protein XRCC4; DNA; Genetics; Molecular biology; DNA mismatch repair; DNA-binding protein; Polymerase; Gene; Transcription factor","score_opus":0.004843619110035483,"score_gpt":0.19762603335713225,"score_spread":0.19278241424709677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140345256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98081297,0.00079589715,0.000763531,0.00012617762,0.00015716214,0.000552669,0.000107414824,0.00025227343,0.016431935],"genre_scores_gemma":[0.9885395,0.000028369375,0.0008967598,0.00081644347,0.00009665609,0.00012047879,0.00033027626,0.00010670284,0.009064821],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802387,0.00010351016,0.0002845455,0.0007733999,0.00028755044,0.0005271284],"domain_scores_gemma":[0.9986236,0.000016269782,0.00012453474,0.00087921275,0.00009319051,0.0002631562],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010737125,0.00038754707,0.0002644091,0.000046514462,0.00011843135,0.00008982157,0.0003242307,0.0002893606,0.00045802342],"category_scores_gemma":[0.00003152347,0.00039079058,0.00031134413,0.00012470513,0.00009736752,0.00001478673,0.00018596894,0.00016257665,0.00015597895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065793545,0.00018901497,0.00024787913,0.00004865184,0.00007619883,0.00002401064,0.00004596135,0.0000026498637,0.97239596,0.000014710745,0.02603015,0.0008590474],"study_design_scores_gemma":[0.0012436407,0.00020992724,0.00017378626,0.000012194644,0.000039095186,0.000009113059,0.000039089082,0.00014589113,0.8890733,0.00004282208,0.10856961,0.00044153843],"about_ca_topic_score_codex":0.00031516323,"about_ca_topic_score_gemma":0.000023966037,"teacher_disagreement_score":0.08332264,"about_ca_system_score_codex":0.000029319059,"about_ca_system_score_gemma":0.00006545375,"threshold_uncertainty_score":0.9998544},"labels":[],"label_agreement":null},{"id":"W2141836580","doi":"10.1016/j.molcel.2011.12.012","title":"Immobilization of Proteins in the Nucleolus by Ribosomal Intergenic Spacer Noncoding RNA","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":268,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research; Health Canada; National Institutes of Health","keywords":"Biology; Nucleolus; Non-coding RNA; Intergenic region; RNA; Computational biology; Ribosomal RNA; Genetics; Genome; Gene","score_opus":0.007473327537325445,"score_gpt":0.24614301940903477,"score_spread":0.23866969187170933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141836580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98894775,0.001548367,0.0057092374,0.00008382031,0.00003698158,0.00028202127,0.0000043181813,0.000003043831,0.0033844486],"genre_scores_gemma":[0.9990225,0.00005626162,0.00025818325,0.000117053954,0.00004372722,0.000026662598,0.00004018475,0.00001643051,0.0004190294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913454,0.000120158205,0.00014896881,0.00014543025,0.00016306952,0.00028783182],"domain_scores_gemma":[0.99959606,0.000006236511,0.00005158064,0.00026170316,0.00003058649,0.000053847863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003057344,0.00009235221,0.00008482831,0.000036280177,0.000029981584,0.000011894274,0.00017985987,0.000078733705,0.000020423306],"category_scores_gemma":[0.00004436004,0.00007261684,0.000069548514,0.00011899223,0.000039134997,0.0000053557237,0.000081229686,0.00009409742,0.00000792027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025502299,0.000106159976,0.0030014694,0.000022133536,0.000008231264,0.0000023925143,0.00012187177,0.000024350244,0.99561596,0.000042195024,0.0005896729,0.0004400902],"study_design_scores_gemma":[0.00031918313,0.00013332505,0.00051427574,0.0000096793065,0.000005226891,0.0000025162542,0.00014564375,0.00014082229,0.9940189,0.000006814116,0.004616889,0.000086734086],"about_ca_topic_score_codex":0.00005903276,"about_ca_topic_score_gemma":0.000016224862,"teacher_disagreement_score":0.010074705,"about_ca_system_score_codex":0.000013144375,"about_ca_system_score_gemma":0.000023983277,"threshold_uncertainty_score":0.29612288},"labels":[],"label_agreement":null},{"id":"W2142562240","doi":"10.1016/j.molcel.2012.01.027","title":"Mechanistic Insight into the Microtubule and Actin Cytoskeleton Coupling through Dynein-Dependent RhoGEF Inhibition","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of New Brunswick; Canada Research Chairs; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Dynein; Microtubule; Biology; Cell biology; Cytoskeleton; Dynactin; Dynein ATPase; Actin; Biochemistry; Cell","score_opus":0.006040476553653042,"score_gpt":0.21917150038685168,"score_spread":0.21313102383319865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142562240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95765275,0.005494559,0.034283165,0.00016125421,0.00018894873,0.0003232991,0.000007978008,0.000023392786,0.0018646779],"genre_scores_gemma":[0.99626446,0.0007959222,0.0013188537,0.00091856555,0.00018028058,0.00003670687,0.00014337727,0.000047854926,0.00029397797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988559,0.000057662877,0.00020850818,0.00034834124,0.00014838389,0.00038124068],"domain_scores_gemma":[0.99934006,0.000012853469,0.000095882475,0.00040392717,0.00005149671,0.00009575569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021162133,0.00023439665,0.00014661254,0.000028900095,0.00020343521,0.000053523087,0.00014384801,0.00020200426,0.000014512428],"category_scores_gemma":[0.000025527359,0.00019508917,0.00009150612,0.00007579397,0.000074975826,0.000011536544,0.00023307197,0.00017231547,0.000030603955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023941942,0.00008490358,0.00012924465,0.000040432184,0.00002825432,0.000006459391,0.00047752814,0.00003129336,0.99811995,0.00047233992,0.0002439904,0.00034168482],"study_design_scores_gemma":[0.00040377455,0.00010821194,0.000035836427,0.000014472483,0.000055817796,0.000025759982,0.00018060068,0.00012093266,0.9705967,0.00014631331,0.028057225,0.00025436995],"about_ca_topic_score_codex":0.000084760024,"about_ca_topic_score_gemma":0.00003407146,"teacher_disagreement_score":0.038611736,"about_ca_system_score_codex":0.00002847293,"about_ca_system_score_gemma":0.000036102436,"threshold_uncertainty_score":0.7955505},"labels":[],"label_agreement":null},{"id":"W2142654480","doi":"10.1016/j.molcel.2007.05.031","title":"High-Throughput Phosphotyrosine Profiling Using SH2 Domains","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":176,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Cancer Institute; National Institutes of Health","keywords":"SH2 domain; Biology; Tyrosine phosphorylation; Proto-oncogene tyrosine-protein kinase Src; Phosphorylation; Tyrosine; Proteome; Cell biology; SH3 domain; Cell adhesion; Phosphotyrosine-binding domain; Biochemistry; Computational biology; Cell","score_opus":0.008165403146187092,"score_gpt":0.26750702703109536,"score_spread":0.2593416238849083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142654480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52945924,0.0003137221,0.4689491,0.000036763373,0.00005128843,0.00017482958,0.0000073974234,0.000042266747,0.0009653844],"genre_scores_gemma":[0.72391534,0.000030590356,0.2752739,0.00038099638,0.00009931246,0.000004742953,0.00010084508,0.000036292215,0.00015800941],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887717,0.000015423724,0.0002211316,0.00041205328,0.00012682173,0.00034737753],"domain_scores_gemma":[0.9992397,0.0000051253087,0.00009383173,0.00049700163,0.00007635898,0.00008797699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017447709,0.0001811624,0.00012507924,0.0000357823,0.00012221545,0.000019666175,0.00015881463,0.00016170455,0.0000051741686],"category_scores_gemma":[0.000014620905,0.00018722368,0.000094126415,0.00015818814,0.00007906572,0.0000029881232,0.00012555919,0.000104320265,0.0000075263956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023021628,0.00005828954,0.0000686379,0.0000082287725,0.000009060753,0.000020850222,0.0000052144323,0.0002049672,0.99739444,0.0012308297,0.00013622742,0.00084020605],"study_design_scores_gemma":[0.00027387406,0.00007768936,0.000033195385,0.000007723827,0.000018305474,0.000015625412,0.00001804921,0.00011684072,0.97810006,0.00063506444,0.020468235,0.00023534798],"about_ca_topic_score_codex":0.00002946792,"about_ca_topic_score_gemma":0.0000057950324,"teacher_disagreement_score":0.1944561,"about_ca_system_score_codex":0.000030044825,"about_ca_system_score_gemma":0.000034321878,"threshold_uncertainty_score":0.763476},"labels":[],"label_agreement":null},{"id":"W2145123833","doi":"10.1016/j.molcel.2004.05.024","title":"Protein-Protein Interaction Affinity Plays a Crucial Role in Controlling the Sho1p-Mediated Signal Transduction Pathway in Yeast","year":2004,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Toronto","funders":"","keywords":"Biology; Signal transduction; Cell biology; Protein–protein interaction; Yeast; Mutant; Plasma protein binding; In vivo; SH3 domain; Biochemistry; Function (biology); Protein kinase A; Kinase; Genetics; Gene; Proto-oncogene tyrosine-protein kinase Src","score_opus":0.008546615636568177,"score_gpt":0.22656419386597923,"score_spread":0.21801757822941106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145123833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944879,0.00050503033,0.0025313422,0.0001874787,0.000051249583,0.0007834662,0.000016955946,0.000008938522,0.0014276574],"genre_scores_gemma":[0.999288,0.000014502357,0.00017036397,0.000067785375,0.0001116093,0.00016855972,0.00007436983,0.00002638038,0.0000784163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99858063,0.0001873837,0.00026671257,0.00037115818,0.00024229518,0.000351789],"domain_scores_gemma":[0.9995821,0.000006592453,0.00005732203,0.00022516656,0.000057557118,0.00007122293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031833458,0.00017408516,0.00014709024,0.000101080994,0.0000605458,0.000041340227,0.0002127666,0.00018009858,0.000040177438],"category_scores_gemma":[0.000049239825,0.00014976227,0.000096649645,0.00022338919,0.000060113256,0.000006706728,0.000059874055,0.00036701746,0.000027416869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041647287,0.00020322506,0.000058456175,0.000018033446,0.0000097017055,0.000039826966,0.00012686772,0.009843915,0.9883175,0.00004273801,0.0000017089261,0.0009215834],"study_design_scores_gemma":[0.0019150223,0.00027644553,0.00017335896,0.000042112115,0.0000030392166,0.0000047696585,0.0001937697,0.0007995233,0.9954207,0.0003128636,0.0006872825,0.00017113583],"about_ca_topic_score_codex":0.00021460709,"about_ca_topic_score_gemma":0.00041180494,"teacher_disagreement_score":0.009044391,"about_ca_system_score_codex":0.000058500875,"about_ca_system_score_gemma":0.00016249195,"threshold_uncertainty_score":0.6107128},"labels":[],"label_agreement":null},{"id":"W2146204567","doi":"10.1016/j.molcel.2013.01.001","title":"A Cell Cycle-Dependent Regulatory Circuit Composed of 53BP1-RIF1 and BRCA1-CtIP Controls DNA Repair Pathway Choice","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":898,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; U.S. Bureau of Land Management","keywords":"Biology; RAD51; Homologous recombination; Cell biology; DNA repair; Cell cycle; Non-homologous end joining; DNA damage; Effector; DNA; Cancer research; Molecular biology; Cell; Genetics","score_opus":0.004919235620533953,"score_gpt":0.18653305034884166,"score_spread":0.1816138147283077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146204567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98611546,0.002195952,0.0016329861,0.000036725854,0.00014178803,0.0007958301,0.000024817093,0.00007871726,0.008977702],"genre_scores_gemma":[0.9962867,0.000040740615,0.0010080729,0.00048871734,0.000075188465,0.000075836164,0.00005817801,0.00008370319,0.0018828808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777395,0.00019452749,0.00046266793,0.00075448485,0.00035542483,0.0004589587],"domain_scores_gemma":[0.99826485,0.0000314177,0.00025557604,0.0010418466,0.00017059126,0.00023574011],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027697565,0.0003504877,0.00039577726,0.00007777952,0.000070386945,0.00003864254,0.0003232777,0.00033485147,0.00007803191],"category_scores_gemma":[0.000054216278,0.00036760664,0.0002584347,0.00008786511,0.00012627333,0.000010567609,0.00024523627,0.0001665996,0.000048726393],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028403088,0.00020330733,0.0005203454,0.000113893104,0.00007157734,0.000028135306,0.000050050636,0.000062077575,0.99773467,0.00012485044,0.00051727233,0.0005454513],"study_design_scores_gemma":[0.0020526233,0.00042927056,0.0011158825,0.000020119132,0.00005622871,0.000015936635,0.00006358615,0.00031819867,0.99062675,0.00031880423,0.0045830966,0.0003994962],"about_ca_topic_score_codex":0.00011023929,"about_ca_topic_score_gemma":0.000008866869,"teacher_disagreement_score":0.0101712,"about_ca_system_score_codex":0.000028833605,"about_ca_system_score_gemma":0.000093601426,"threshold_uncertainty_score":0.9998776},"labels":[],"label_agreement":null},{"id":"W2146926661","doi":"10.1016/j.molcel.2013.05.021","title":"Defining the RGG/RG Motif","year":2013,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":709,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Motif (music); Computational biology; Evolutionary biology","score_opus":0.010254455828484181,"score_gpt":0.26270672574472065,"score_spread":0.2524522699162365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146926661","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007534032,0.9914299,0.0010695687,0.000033513996,0.0003742994,0.0008066292,0.000021446274,0.000022312694,0.00616699],"genre_scores_gemma":[0.00021348192,0.9946079,0.0003658566,0.00010608081,0.0002722735,0.00018988435,0.0008723308,0.00014070638,0.0032314493],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981097,0.00022566608,0.0004347508,0.00062809675,0.0002249534,0.00037681754],"domain_scores_gemma":[0.9984216,0.000020025502,0.00032382147,0.0010738374,0.000071125774,0.00008956419],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017685068,0.0004693448,0.0005755958,0.00006977291,0.000106840766,0.00007406344,0.00052265794,0.000653446,0.000078423465],"category_scores_gemma":[0.00003697456,0.00034463097,0.00064076076,0.00020725587,0.00008069367,0.000002147073,0.00025989072,0.000336564,0.00053437176],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000002917627,0.000029306626,8.098111e-7,0.0016705402,0.00021534995,0.000009380473,0.000011842517,0.00016106921,0.0027084118,0.00014163335,0.011521992,0.98352677],"study_design_scores_gemma":[0.0001287699,0.000055017907,6.0485166e-7,0.0004716211,0.00040413407,0.000030298577,0.000004452454,0.000019386727,0.005103073,0.000020209427,0.9933756,0.0003868333],"about_ca_topic_score_codex":0.000019428422,"about_ca_topic_score_gemma":0.0000044071367,"teacher_disagreement_score":0.98313993,"about_ca_system_score_codex":0.000054808017,"about_ca_system_score_gemma":0.00026219143,"threshold_uncertainty_score":0.9999006},"labels":[],"label_agreement":null},{"id":"W2147297219","doi":"10.1016/j.molcel.2011.05.029","title":"Global Functional Map of the p23 Molecular Chaperone Reveals an Extensive Cellular Network","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Canadian Institutes of Health Research","keywords":"Biology; Biogenesis; Chaperone (clinical); Computational biology; Expansive; Budding yeast; Hsp90; Co-chaperone; Cell biology; Genetics; Yeast; Gene; Saccharomyces cerevisiae; Heat shock protein","score_opus":0.018514200507843068,"score_gpt":0.2396973032610499,"score_spread":0.22118310275320685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147297219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9603551,0.002353989,0.028310856,0.00011746877,0.0002549965,0.0006669019,0.000031983025,0.000018168364,0.007890529],"genre_scores_gemma":[0.9954553,0.000015345,0.0027822978,0.0005876013,0.00015357108,0.000051288098,0.00008277481,0.00005111463,0.000820684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975061,0.00039482815,0.00034996917,0.0006234209,0.00051859673,0.00060712855],"domain_scores_gemma":[0.9980574,0.0000055683277,0.00012753658,0.00127049,0.00031993847,0.00021905586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038001157,0.0002789506,0.00024366383,0.000031649164,0.00012660275,0.000017529665,0.0006420696,0.00028530796,0.00020026826],"category_scores_gemma":[0.000061135994,0.00023746354,0.00025822624,0.0002561264,0.00023269124,0.0000068840463,0.0004889375,0.00018113223,0.00005133674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001198709,0.00017133927,0.0016786114,0.00003977116,0.000064691245,0.0000676602,0.00003088867,0.00057460356,0.9948358,0.00078554766,0.0012761691,0.0003550375],"study_design_scores_gemma":[0.0005302199,0.00044391595,0.0034291688,0.000018534085,0.000038041828,0.000014596115,0.000038618196,0.0000865644,0.9881958,0.0012626419,0.0056541977,0.00028773825],"about_ca_topic_score_codex":0.00008825613,"about_ca_topic_score_gemma":0.000015082476,"teacher_disagreement_score":0.035100214,"about_ca_system_score_codex":0.0000372759,"about_ca_system_score_gemma":0.00018511,"threshold_uncertainty_score":0.9683482},"labels":[],"label_agreement":null},{"id":"W2149821708","doi":"10.1016/j.molcel.2014.07.018","title":"Dephosphorylation of Tyrosine 393 in Argonaute 2 by Protein Tyrosine Phosphatase 1B Regulates Gene Silencing in Oncogenic RAS-Induced Senescence","year":2014,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Cancer Research UK; Breast Cancer Coalition of Rochester; Masthead Cove Yacht Club; Cold Spring Harbor Laboratory; Heart and Stroke Foundation of Canada; Howard Hughes Medical Institute","keywords":"Gene silencing; Biology; Argonaute; Protein tyrosine phosphatase; Senescence; Cell biology; Dephosphorylation; Tyrosine; Phosphorylation; Phosphatase; Tyrosine phosphorylation; Reactive oxygen species; Mitochondrion; Small interfering RNA; Gene; Biochemistry; Transfection","score_opus":0.004652208429373101,"score_gpt":0.20783846209155538,"score_spread":0.20318625366218226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149821708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96897364,0.024908453,0.004941359,0.00007351261,0.00007576665,0.0008360343,0.00009015042,0.00002137222,0.00007973953],"genre_scores_gemma":[0.9952483,0.00014234467,0.0032283275,0.00017380122,0.00004260055,0.00011239402,0.0008998783,0.000072570525,0.000079752084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974315,0.0002017908,0.00069864106,0.0007956631,0.0003249739,0.0005473983],"domain_scores_gemma":[0.99860567,0.000020664742,0.00031924198,0.00081795175,0.00010745407,0.00012900276],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00052336545,0.00039528948,0.00042125533,0.00014109093,0.000045992183,0.000027112166,0.00041183186,0.0002928694,0.000014894183],"category_scores_gemma":[0.00022831181,0.00044150025,0.00012311929,0.00048019373,0.00009237619,0.000020289644,0.00021751883,0.00020282395,0.0000114175355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019284288,0.00029624603,0.0012579672,0.0000952734,0.000012594122,0.000025702211,0.000027281061,0.0004963041,0.9949901,0.00016656265,0.00015426816,0.0022848279],"study_design_scores_gemma":[0.0022810358,0.00037942623,0.001459706,0.00013840526,0.000018605973,0.000005462568,0.000012112395,0.0007544665,0.9938053,0.00014773742,0.000540653,0.0004571294],"about_ca_topic_score_codex":0.0005964617,"about_ca_topic_score_gemma":0.00007995279,"teacher_disagreement_score":0.026274718,"about_ca_system_score_codex":0.000077369026,"about_ca_system_score_gemma":0.00012885043,"threshold_uncertainty_score":0.99980366},"labels":[],"label_agreement":null},{"id":"W2151218508","doi":"10.1016/j.molcel.2012.09.002","title":"Gravin Is a Transitory Effector of Polo-like Kinase 1 during Cell Division","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institute of General Medical Sciences; National Institute on Drug Abuse; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; Cell biology; Mitosis; Polo-like kinase; Cyclin-dependent kinase 1; Prometaphase; PLK1; Kinase; Phosphorylation; Cell growth; Cell cycle; Cell division; Protein kinase A; Cell; Biochemistry","score_opus":0.003043617608519449,"score_gpt":0.19751923867452162,"score_spread":0.19447562106600216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151218508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913091,0.0039293594,0.003147626,0.000014297575,0.00022285579,0.00021643582,0.000045746594,0.0000113409415,0.001103202],"genre_scores_gemma":[0.9982714,0.000115118055,0.00054680416,0.00021233867,0.00009027429,0.000012611653,0.00010229197,0.0000460607,0.0006031227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886847,0.000081599384,0.00021503512,0.00029668558,0.00015131054,0.00038688193],"domain_scores_gemma":[0.99924606,0.000005642961,0.000087600885,0.00047188086,0.00004214682,0.00014668699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000113368245,0.00021381167,0.00018848786,0.000056056087,0.00005348559,0.000009335919,0.00019341795,0.00020453142,0.00003949885],"category_scores_gemma":[0.000005743118,0.00021673254,0.00022745809,0.00007204952,0.0000519001,0.000004763245,0.0001043369,0.000105214094,0.000032495376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040693474,0.00024252996,0.0028512222,0.00017240312,0.000021854525,0.0000073797605,0.00014513051,0.000015703343,0.995816,0.0000034462275,0.00052922213,0.00015444166],"study_design_scores_gemma":[0.000733767,0.00015236525,0.00208652,0.0000161265,0.000044401215,0.000003788428,0.000032533848,0.000014991078,0.98710304,0.0000026018404,0.009570102,0.00023974213],"about_ca_topic_score_codex":0.00002593441,"about_ca_topic_score_gemma":0.0000021239582,"teacher_disagreement_score":0.009040881,"about_ca_system_score_codex":0.000013899682,"about_ca_system_score_gemma":0.000026657784,"threshold_uncertainty_score":0.8838096},"labels":[],"label_agreement":null},{"id":"W2152247516","doi":"10.1016/s1097-2765(01)00320-3","title":"BCL-2, BCL-XL Sequester BH3 Domain-Only Molecules Preventing BAX- and BAK-Mediated Mitochondrial Apoptosis","year":2001,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1692,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada); Ontario Institute for Cancer Research","funders":"National Cancer Institute","keywords":"Biology; Bcl-xL; Cell biology; Apoptosis; Mitochondrion; Domain (mathematical analysis); Bcl-2-associated X protein; Programmed cell death; Biochemistry; Caspase 3","score_opus":0.006633206729562153,"score_gpt":0.21741452034674408,"score_spread":0.21078131361718191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152247516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9451188,0.001671544,0.03369387,0.00034445917,0.0011454797,0.00056098035,0.000032131305,0.00006814618,0.017364578],"genre_scores_gemma":[0.9623652,0.0010290163,0.018160127,0.0035928714,0.0014527224,0.00012247468,0.0010303048,0.00019880632,0.0120484475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99758744,0.00031995008,0.00042762325,0.00085308164,0.00023932723,0.0005725713],"domain_scores_gemma":[0.998886,0.000027258313,0.00016344823,0.0005599926,0.00010704778,0.00025623635],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017634487,0.00039609853,0.00032065943,0.00011635731,0.0001577649,0.000086518565,0.00025418206,0.00044852128,0.00021715327],"category_scores_gemma":[0.000106944826,0.00040241145,0.000209932,0.00019319245,0.00013712318,0.000010717261,0.00023243981,0.00022936455,0.00011615684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019430618,0.00011619564,0.0010360163,0.00003228534,0.00004975051,0.00008244299,0.000079203135,0.000021489132,0.9942514,0.00009433319,0.003040229,0.001002387],"study_design_scores_gemma":[0.003073189,0.0006200282,0.00019290102,0.00003627657,0.00009855723,0.00023958898,0.00011629364,0.000068326575,0.65760446,0.00025607494,0.336903,0.00079128734],"about_ca_topic_score_codex":0.000018803365,"about_ca_topic_score_gemma":0.000019550747,"teacher_disagreement_score":0.33664688,"about_ca_system_score_codex":0.000018814926,"about_ca_system_score_gemma":0.000085782245,"threshold_uncertainty_score":0.99984276},"labels":[],"label_agreement":null},{"id":"W2153203105","doi":"10.1016/j.molcel.2007.11.039","title":"Cooperative Assembly of TGF-β Superfamily Signaling Complexes Is Mediated by Two Disparate Mechanisms and Distinct Modes of Receptor Binding","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":286,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"Biology; Cell biology; Receptor; Signal transduction; SMAD; Bone morphogenetic protein; Transforming growth factor; BMPR2; Avidity; Extracellular; Ligand (biochemistry); Biochemistry; Genetics","score_opus":0.012301608912136454,"score_gpt":0.2355035759219078,"score_spread":0.22320196700977135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153203105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98036295,0.0023296739,0.016381048,0.000013497273,0.000031769345,0.00020197469,0.00043744966,0.00001424246,0.00022741387],"genre_scores_gemma":[0.99619937,0.000092909635,0.002773591,0.000086566644,0.000016682545,0.000014920533,0.00063745235,0.00004468517,0.00013381822],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855036,0.00013638138,0.0003783643,0.00043016017,0.0002444806,0.0002602483],"domain_scores_gemma":[0.9991895,0.000044934357,0.00018613724,0.00028206367,0.00017194408,0.00012544048],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012552235,0.0002565295,0.00033704395,0.000058491863,0.00010683419,0.000013540534,0.000211471,0.0001168284,0.00003936261],"category_scores_gemma":[0.00007236744,0.00025249418,0.00010083116,0.00013190198,0.00022433189,0.000007102768,0.00012839418,0.00007984649,0.0000071447016],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091358,0.0001563593,0.0009549557,0.00006548355,0.0000858219,0.000007795788,0.00014863795,0.00041475333,0.9973692,0.000028210863,0.0006518348,0.000025530682],"study_design_scores_gemma":[0.0008356307,0.0003016771,0.00007364171,0.000040807256,0.000044019747,0.000003091797,0.000106254716,0.00058158615,0.9974204,0.000014943617,0.00030942977,0.00026857003],"about_ca_topic_score_codex":0.000048112008,"about_ca_topic_score_gemma":0.0000029205335,"teacher_disagreement_score":0.015836442,"about_ca_system_score_codex":0.000010388937,"about_ca_system_score_gemma":0.00008900345,"threshold_uncertainty_score":0.9999927},"labels":[],"label_agreement":null},{"id":"W2153598858","doi":"10.1016/s1097-2765(03)00454-4","title":"Mechanism of SMRT Corepressor Recruitment by the BCL6 BTB Domain","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":291,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute","keywords":"Corepressor; Biology; BCL6; Psychological repression; Transcription factor; Repressor; Cell biology; Genetics; Histone deacetylase; Germinal center; Gene; Histone; B cell; Gene expression","score_opus":0.01685569203475642,"score_gpt":0.2676541220792922,"score_spread":0.2507984300445358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153598858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9470039,0.0028622167,0.01395464,0.000179409,0.00015043316,0.0008404536,0.00003983694,0.000011353195,0.034957767],"genre_scores_gemma":[0.99427426,0.000074462,0.0010866927,0.0002585325,0.000025387513,0.00012441786,0.00006732679,0.000041519466,0.0040473747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984056,0.0003101783,0.00023737384,0.0003828157,0.00033724215,0.00032680068],"domain_scores_gemma":[0.99894154,0.000014498003,0.000092045266,0.00076733885,0.00008702469,0.00009753374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044373717,0.00017197143,0.0001542292,0.000033004257,0.00008359444,0.000015291469,0.00031509757,0.00015103383,0.00007889398],"category_scores_gemma":[0.00007566786,0.00013892907,0.0001466564,0.00011897903,0.00013178572,0.0000016304759,0.00010883135,0.00014115182,0.00003841328],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024380952,0.000119065946,0.000008094178,0.00001613114,0.000031142754,0.000015495252,0.00005706996,0.000019775567,0.9876566,0.001417431,0.01043638,0.00019846827],"study_design_scores_gemma":[0.00044700538,0.0001726479,0.0000012539139,0.0000050707354,0.000010418363,0.00000945047,0.00006148267,0.000007800375,0.81249547,0.00036107373,0.18630289,0.00012545202],"about_ca_topic_score_codex":0.000027824419,"about_ca_topic_score_gemma":0.00000468165,"teacher_disagreement_score":0.1758665,"about_ca_system_score_codex":0.00002827804,"about_ca_system_score_gemma":0.000087245295,"threshold_uncertainty_score":0.5665363},"labels":[],"label_agreement":null},{"id":"W2153643905","doi":"10.1016/j.molcel.2012.06.010","title":"Independence of Repressive Histone Marks and Chromatin Compaction during Senescent Heterochromatic Layer Formation","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":313,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Cancer Institute; National Institute on Aging; Canadian Institutes of Health Research; National Institute of General Medical Sciences; Cancer Research UK","keywords":"Heterochromatin; Biology; Epigenetics; Chromatin; Histone; Epigenesis; Heterochromatin protein 1; Evolutionary biology; Cell biology; Genome; Somatic cell; Genetics; DNA; DNA methylation; Gene; Gene expression","score_opus":0.005302328447362476,"score_gpt":0.22411937472355478,"score_spread":0.2188170462761923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153643905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915912,0.0010638941,0.0063426886,0.000014501105,0.000085248736,0.00016807078,0.000005445507,0.000007475545,0.0007214582],"genre_scores_gemma":[0.998096,0.000084789994,0.0015672776,0.00003302325,0.000032758282,0.000009389497,0.00006129297,0.000019396755,0.000096111646],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920017,0.00005144394,0.00023881205,0.0001655931,0.00014150226,0.00020248012],"domain_scores_gemma":[0.99938995,0.0000039044294,0.0002026879,0.00027683962,0.000047537327,0.00007907804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001160379,0.00013250411,0.00013804983,0.00004018258,0.000053168984,0.000013031739,0.00008375312,0.00011881746,0.000010452266],"category_scores_gemma":[0.000014064737,0.00013850321,0.00005481087,0.000040057912,0.000038909035,0.00001226986,0.00010604421,0.000068560454,0.000003894818],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018325305,0.00006320469,0.0011068925,0.00020932706,0.000016061178,0.0000020531886,0.00019205228,0.00021440587,0.99796563,0.000010919407,0.000032385622,0.00016876584],"study_design_scores_gemma":[0.00043612902,0.00005964958,0.011640597,0.0000300189,0.000024502006,0.00005369183,0.00011352984,0.0013811517,0.98600507,0.000020398686,0.00008179743,0.00015344386],"about_ca_topic_score_codex":0.000015492758,"about_ca_topic_score_gemma":0.0000037849777,"teacher_disagreement_score":0.011960517,"about_ca_system_score_codex":0.000035019333,"about_ca_system_score_gemma":0.000014681245,"threshold_uncertainty_score":0.56479967},"labels":[],"label_agreement":null},{"id":"W2154661144","doi":"10.1016/s1097-2765(03)00145-x","title":"Requirement of Skp1-Bub1 Interaction for Kinetochore-Mediated Activation of the Spindle Checkpoint","year":2003,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Cancer Institute","keywords":"Kinetochore; BUB1; Spindle checkpoint; Biology; Cell biology; Centromere; Cell cycle checkpoint; Spindle apparatus; Mitosis; G2-M DNA damage checkpoint; Aurora B kinase; Genetics; Cell cycle; Cell division; Cell; Chromosome","score_opus":0.009191298597998809,"score_gpt":0.23808362079403397,"score_spread":0.22889232219603517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154661144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95550007,0.00012866194,0.041736577,0.000050418796,0.00013463722,0.00045809997,0.000014431757,0.000002909047,0.0019742218],"genre_scores_gemma":[0.9983161,0.00002788664,0.0011808472,0.000121526224,0.000019189374,0.000030289162,0.00009670596,0.000017297212,0.00019012022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993095,0.00004785599,0.000245217,0.00017803187,0.00009653379,0.00012287816],"domain_scores_gemma":[0.99933183,0.000007022231,0.00020381257,0.00031663844,0.000117182906,0.000023498096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000123965,0.00010047218,0.00010888011,0.000027620074,0.00002448201,0.000004298336,0.00011866833,0.00009893613,0.00001291768],"category_scores_gemma":[0.000100156874,0.000083407285,0.00015140552,0.00007703937,0.000035149955,0.0000028179359,0.000037898313,0.00004884426,9.580732e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041807456,0.000102926635,0.00016022372,0.00005474309,0.000028562192,9.677987e-8,0.000028324319,0.00026932242,0.99871445,0.00016525053,0.00023144239,0.00020285745],"study_design_scores_gemma":[0.0005193796,0.00018017122,0.00015787987,0.000020294701,0.000023503037,8.5484544e-7,0.000049706567,0.00014285726,0.98212034,0.00006922228,0.016632037,0.00008376979],"about_ca_topic_score_codex":0.000013155684,"about_ca_topic_score_gemma":0.000004810232,"teacher_disagreement_score":0.042816095,"about_ca_system_score_codex":0.000018232839,"about_ca_system_score_gemma":0.000052807514,"threshold_uncertainty_score":0.34012502},"labels":[],"label_agreement":null},{"id":"W2159781519","doi":"10.1016/j.molcel.2015.07.028","title":"Higher-Order Assembly of BRCC36–KIAA0157 Is Required for DUB Activity and Biological Function","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McMaster University; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Center for Research Resources; National Institute of General Medical Sciences; Canadian Institutes of Health Research; Abramson Family Cancer Research Institute; National Cancer Institute; National Institutes of Health; Canada Research Chairs; Wellcome Trust; U.S. Department of Energy","keywords":"Deubiquitinating enzyme; Biology; Ubiquitin; Function (biology); Cell biology; Biochemistry; Dimer; Protein subunit; Gene; Chemistry","score_opus":0.03685938584522072,"score_gpt":0.2622295410964337,"score_spread":0.22537015525121298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159781519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9723392,0.0012003499,0.0221894,0.00022569728,0.00014117049,0.00033923055,0.000040287352,0.0000145453805,0.0035101073],"genre_scores_gemma":[0.9966393,0.000032131444,0.0020280941,0.0004242147,0.00008374425,0.000044231972,0.00007246511,0.000020980015,0.00065480114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990936,0.000083296574,0.00014198107,0.00036520805,0.00010767982,0.00020825944],"domain_scores_gemma":[0.9993479,0.000012120167,0.00009782386,0.00027141196,0.00015508577,0.000115606956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024134167,0.00015302947,0.0001713886,0.000028041915,0.000036660294,0.000014344293,0.000099377095,0.0002635907,0.000016011047],"category_scores_gemma":[0.00006845038,0.00013870436,0.00008677635,0.000072006835,0.000076643926,0.000004364561,0.000099787816,0.00006461801,0.0000053135745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003118761,0.00008089424,0.00024497663,0.000035108103,0.000028758315,0.0000020020648,0.00002517389,0.000004667018,0.9946381,0.00018147638,0.0014468262,0.0030001584],"study_design_scores_gemma":[0.0010234598,0.0011256638,0.0005339178,0.0000043579566,0.00002369774,0.0000026792086,0.000019514271,0.00005574199,0.9375791,0.00043641165,0.059024204,0.00017124828],"about_ca_topic_score_codex":0.000014087364,"about_ca_topic_score_gemma":0.0000019261909,"teacher_disagreement_score":0.05757738,"about_ca_system_score_codex":0.000008408923,"about_ca_system_score_gemma":0.00006498427,"threshold_uncertainty_score":0.56562},"labels":[],"label_agreement":null},{"id":"W2160505835","doi":"10.1016/j.molcel.2005.02.012","title":"The Molecular Architecture of the Mammalian DNA Repair Enzyme, Polynucleotide Kinase","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":209,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; University of Alberta","funders":"","keywords":"Biology; Biochemistry; Cell biology; DNA repair; Phosphatase; DNA; Enzyme; Molecular biology","score_opus":0.0030214707270632677,"score_gpt":0.19374524338176544,"score_spread":0.19072377265470217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160505835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98133147,0.0034657575,0.0036272584,0.001386282,0.00020824482,0.000504938,0.00001976617,0.00005311359,0.009403196],"genre_scores_gemma":[0.9918985,0.000033581342,0.0034294354,0.0014131649,0.000107614316,0.000030009662,0.00001772137,0.00007339992,0.0029966156],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99803716,0.00025865255,0.00035305362,0.00049433735,0.00038341028,0.0004733832],"domain_scores_gemma":[0.9979458,0.000016458062,0.00018344763,0.001647358,0.00008637158,0.00012059474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032458684,0.0002926437,0.00018198261,0.000036365353,0.00017809223,0.00003117196,0.0008224751,0.00019307264,0.000023891782],"category_scores_gemma":[0.0001051282,0.00019677878,0.00055614073,0.00018562618,0.00020117604,0.000003047496,0.0004242896,0.0002251286,0.000023044566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044074106,0.00007149908,0.000055730572,0.00001968701,0.000055024542,0.000025453377,0.000037363658,0.0007998147,0.99420965,0.0010646093,0.0014682205,0.0021488743],"study_design_scores_gemma":[0.00033214886,0.00011876557,0.00007684462,0.000010116057,0.00004321764,0.000017428618,0.000031052074,0.00008943404,0.8231162,0.00022715819,0.17573996,0.0001977087],"about_ca_topic_score_codex":0.000018697801,"about_ca_topic_score_gemma":0.00004559542,"teacher_disagreement_score":0.17427175,"about_ca_system_score_codex":0.000023567884,"about_ca_system_score_gemma":0.000098112716,"threshold_uncertainty_score":0.8024406},"labels":[],"label_agreement":null},{"id":"W2164018178","doi":"10.1016/j.molcel.2008.05.006","title":"Structure of the Hsp110:Hsc70 Nucleotide Exchange Machine","year":2008,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":223,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; U.S. Public Health Service; National Cancer Institute; National Institutes of Health; Mountain Equipment Co-operative; University of Texas Health Science Center at San Antonio; American Historical Association; National Institute on Aging; Welch Foundation","keywords":"Nucleotide; Biology; Guanine nucleotide exchange factor; Protein folding; Cyclic nucleotide-binding domain; Protein structure; Hsp70; Biophysics; Protein family; Biochemistry; Cell biology; Heat shock protein; Signal transduction","score_opus":0.00835987090827896,"score_gpt":0.23184294487317336,"score_spread":0.2234830739648944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164018178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99139225,0.0017236042,0.00094408856,0.00017295941,0.00006867814,0.00033948262,0.000050999188,0.000008082153,0.0052998723],"genre_scores_gemma":[0.996984,0.000103180166,0.0005851865,0.00028592724,0.000061009378,0.000007549894,0.00003717424,0.000037575766,0.0018984004],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879694,0.00014060742,0.0001713834,0.00029096243,0.0003099521,0.00029016574],"domain_scores_gemma":[0.99900573,0.0000048294637,0.000055649925,0.0007647682,0.000083507366,0.00008552616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007717952,0.00015224442,0.00013629414,0.00003755308,0.00010387235,0.0000063445796,0.000460717,0.00014752151,0.00015667692],"category_scores_gemma":[0.00006389032,0.000114308816,0.00014453314,0.00016290294,0.00015262225,0.0000018518012,0.00034970636,0.00018054186,0.00001336987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022473836,0.000039639915,0.0012751276,0.000042525808,0.000017998156,0.00002468525,0.00004605462,0.000062117,0.99674594,0.000011095922,0.0012297021,0.00048265595],"study_design_scores_gemma":[0.00036314558,0.00010473585,0.0012126348,0.0000059755266,0.000006619975,0.000023266773,0.0000065803893,0.000036903417,0.96449375,0.0000309735,0.03359395,0.00012149208],"about_ca_topic_score_codex":0.000081056394,"about_ca_topic_score_gemma":0.000030633477,"teacher_disagreement_score":0.03236425,"about_ca_system_score_codex":0.000013676961,"about_ca_system_score_gemma":0.000101500824,"threshold_uncertainty_score":0.46613783},"labels":[],"label_agreement":null},{"id":"W2164239618","doi":"10.1016/j.molcel.2007.06.023","title":"Structural Basis for Ubiquitin-Mediated Dimerization and Activation of the Ubiquitin Protein Ligase Cbl-b","year":2007,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":122,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Brookhaven National Laboratory; National Cancer Institute; Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biology; Ubiquitin ligase; Ubiquitin; Ubiquitin-Protein Ligases; DNA ligase; Cell biology; Biochemistry; Posttranslational modification; Computational biology; Enzyme; Gene","score_opus":0.008118751663838443,"score_gpt":0.22252840526514797,"score_spread":0.21440965360130954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164239618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852566,0.00018506724,0.012601778,0.00012970473,0.00005338452,0.0009099015,0.00004680337,0.0000112088155,0.0008055329],"genre_scores_gemma":[0.9976664,0.000006093275,0.0015290002,0.00028154714,0.00007358071,0.00005013913,0.0001628923,0.000028989867,0.00020135449],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906635,0.0000614124,0.00023356479,0.0002660311,0.00014207135,0.00023055995],"domain_scores_gemma":[0.99936575,0.00002458031,0.00017229014,0.0002604039,0.000113589726,0.00006338248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026990456,0.00014938488,0.00011843277,0.000038855556,0.00009489118,0.000015995704,0.0001386742,0.00015577943,0.000010083496],"category_scores_gemma":[0.00021987336,0.00012378625,0.000089509966,0.00011982169,0.00008228697,0.0000050470194,0.000089108384,0.00007382966,8.5220523e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010367018,0.000019998846,0.00031897388,0.00008429223,0.000014318866,7.319079e-7,0.000074496085,0.000015423844,0.9972678,0.00019032028,0.000027927561,0.0018820352],"study_design_scores_gemma":[0.00051733677,0.00019187259,0.00090548245,0.00003082013,0.000016700975,0.00000218502,0.00006148423,0.00012746312,0.99569666,0.00014531713,0.0021563936,0.00014830283],"about_ca_topic_score_codex":0.000014201763,"about_ca_topic_score_gemma":0.0000064943024,"teacher_disagreement_score":0.012409784,"about_ca_system_score_codex":0.000010837945,"about_ca_system_score_gemma":0.0000512681,"threshold_uncertainty_score":0.50478566},"labels":[],"label_agreement":null},{"id":"W2165179086","doi":"10.1016/j.molcel.2013.08.048","title":"BID Preferentially Activates BAK while BIM Preferentially Activates BAX, Affecting Chemotherapy Response","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":242,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Cancer Institute; American Cancer Society","keywords":"Biology; Chemotherapy; Cell biology; Cancer research; Genetics","score_opus":0.006456490412156301,"score_gpt":0.207077874634788,"score_spread":0.2006213842226317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165179086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9803994,0.0003223911,0.015425799,0.00020428214,0.00025116722,0.0007230999,0.0000075634243,0.00006628759,0.0025999635],"genre_scores_gemma":[0.99351215,0.00013488467,0.0025464168,0.00023348995,0.00018441991,0.00007430831,0.000215008,0.00010475331,0.002994559],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801004,0.0002514542,0.0002984497,0.0006828759,0.0002680162,0.00048915966],"domain_scores_gemma":[0.99884087,0.000032098844,0.00018372507,0.0006296535,0.0001525965,0.00016103525],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00024225017,0.00037888772,0.0002511193,0.000112363916,0.00016193026,0.00015420582,0.00030497514,0.000361855,0.0005698032],"category_scores_gemma":[0.000044893426,0.00034690386,0.00022257616,0.00015574216,0.000051019662,0.00002056171,0.00017276146,0.00017471309,0.00009249753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036203914,0.00016775649,0.000104470986,0.00003802553,0.00008519653,0.0000024567164,0.00006891537,0.00020441647,0.99051696,0.0000365984,0.0005987532,0.007814421],"study_design_scores_gemma":[0.0010244944,0.0004302025,0.002512617,0.000026662887,0.000031888474,0.000003832638,0.00006415777,0.00021508323,0.9795794,0.00026840638,0.015414457,0.0004288188],"about_ca_topic_score_codex":0.000058708123,"about_ca_topic_score_gemma":0.000008744237,"teacher_disagreement_score":0.014815704,"about_ca_system_score_codex":0.00003081716,"about_ca_system_score_gemma":0.00009132856,"threshold_uncertainty_score":0.9998983},"labels":[],"label_agreement":null},{"id":"W2168090658","doi":"10.1016/j.molcel.2009.09.044","title":"SOCS1 Links Cytokine Signaling to p53 and Senescence","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Suppressor of cytokine signaling 1; Transactivation; Biology; DNA damage; Senescence; Phosphorylation; Cell biology; Signal transduction; Cancer research; Cytokine; Suppressor; DNA; Genetics; Transcription factor; Gene","score_opus":0.010624485240894892,"score_gpt":0.2572585628915752,"score_spread":0.24663407765068032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168090658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9570604,0.00037471205,0.026992198,0.0037480441,0.00009572559,0.0002898816,0.0000059010167,0.00009042082,0.011342694],"genre_scores_gemma":[0.9885168,0.000015561913,0.004927496,0.005991853,0.000113633185,0.0000043901737,0.000011995538,0.000017174852,0.00040106682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99915975,0.00001771602,0.00017539303,0.0002672117,0.00016668707,0.00021324778],"domain_scores_gemma":[0.9994345,0.00002292845,0.000036295016,0.00022135885,0.00007850932,0.00020642206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000083693914,0.00013470695,0.00018286706,0.00009987221,0.0000663157,0.00003207873,0.000052692303,0.00009449989,0.00009726087],"category_scores_gemma":[0.00005575133,0.00012668075,0.00007808197,0.00016442413,0.00001615715,0.00003361873,0.00002430396,0.0002739988,0.000071133145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038069258,0.00008474257,0.00012564276,0.000018197114,0.000008093932,0.00017603333,0.00014645992,0.000083894,0.99404925,0.000108355234,0.0005208621,0.004640412],"study_design_scores_gemma":[0.0004968731,0.0005279058,0.00054498663,0.00010858112,0.000051924322,0.00006567001,0.00004401349,0.000418294,0.972961,0.00009609156,0.024534924,0.0001496978],"about_ca_topic_score_codex":0.000022641887,"about_ca_topic_score_gemma":9.576439e-7,"teacher_disagreement_score":0.031456407,"about_ca_system_score_codex":0.000026825122,"about_ca_system_score_gemma":0.00003635916,"threshold_uncertainty_score":0.5165891},"labels":[],"label_agreement":null},{"id":"W2168258419","doi":"10.1016/j.molcel.2005.12.011","title":"Mapping Pathways and Phenotypes by Systematic Gene Overexpression","year":2006,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":703,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council","keywords":"Biology; Phenotype; Gene; Genetics; Transcription factor; Mutant; Regulation of gene expression; Saccharomyces cerevisiae; Context (archaeology); Cell biology","score_opus":0.005574919221464025,"score_gpt":0.19739412218209343,"score_spread":0.1918192029606294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168258419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97591263,0.0117893675,0.0055757146,0.000023173536,0.00003186827,0.00026550575,0.000023599676,0.0000120513705,0.006366059],"genre_scores_gemma":[0.9973127,0.00009200998,0.0008756288,0.00009272488,0.00006137186,0.000026016527,0.00013265722,0.000026662145,0.0013802171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99898404,0.00008093144,0.00017329903,0.00031849722,0.00019318916,0.00025005004],"domain_scores_gemma":[0.9995423,0.000007285414,0.00005075095,0.00027792685,0.000045643086,0.000076098106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011386662,0.00014550438,0.00014044718,0.00003482493,0.00007176527,0.000042964683,0.00013495544,0.0001131023,0.000009796418],"category_scores_gemma":[0.000015913263,0.00012872527,0.000054196385,0.00006268506,0.000041096147,0.0000017965376,0.00015497001,0.00006721091,0.000018996816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009728139,0.000044027016,0.000118410266,0.00094746694,0.000010134548,0.000008480244,0.0000119222705,0.00004327445,0.9975051,0.00003978785,0.0012069417,0.000054701333],"study_design_scores_gemma":[0.0003034002,0.000075148,0.000072816845,0.00012594095,0.0000070642,0.000006828519,0.000027112843,0.00019468695,0.99717295,0.00018305593,0.0016640187,0.00016698761],"about_ca_topic_score_codex":0.000021828853,"about_ca_topic_score_gemma":8.887384e-7,"teacher_disagreement_score":0.021400051,"about_ca_system_score_codex":0.000007549754,"about_ca_system_score_gemma":0.000021248445,"threshold_uncertainty_score":0.5249264},"labels":[],"label_agreement":null},{"id":"W2168639701","doi":"10.1016/j.molcel.2015.01.013","title":"Phase Transition of a Disordered Nuage Protein Generates Environmentally Responsive Membraneless Organelles","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1918,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; SickKids Foundation; University of Toronto; Hospital for Sick Children; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; Health Canada","keywords":"Organelle; Biology; Cell biology; Biophysics","score_opus":0.010066548080240344,"score_gpt":0.24750797855777246,"score_spread":0.2374414304775321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168639701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876805,0.0011324285,0.009900692,0.00012128416,0.00001368847,0.00038223717,0.00003196585,0.0000069424054,0.00073025207],"genre_scores_gemma":[0.9973739,0.000048685066,0.0012020246,0.00008476237,0.000027234095,0.000032180837,0.00022407778,0.000029807192,0.0009773263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989089,0.00016351794,0.00018439177,0.0002821141,0.00022883069,0.00023224847],"domain_scores_gemma":[0.9994308,0.000004437367,0.0000612817,0.00029431767,0.000059143866,0.000150062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001915902,0.00014293987,0.00014453488,0.00004872244,0.000037197577,0.000015072648,0.00015992136,0.0001017501,0.000025029256],"category_scores_gemma":[0.000043583997,0.00013942964,0.000079633646,0.00008125762,0.000085991116,0.000004202486,0.000057953774,0.000072973744,0.000011974922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052716036,0.0003627952,0.00000814344,0.00003277039,0.000026065414,0.000048851725,0.00018161746,0.00030204593,0.9977367,0.000013391307,0.00012857701,0.000631905],"study_design_scores_gemma":[0.002798119,0.0009788292,0.0000047075655,0.000010387186,0.000012073981,0.0000049579735,0.0004780623,0.00052507175,0.99383724,0.000047270856,0.0011490985,0.00015417613],"about_ca_topic_score_codex":0.00003503599,"about_ca_topic_score_gemma":0.000007929171,"teacher_disagreement_score":0.009693393,"about_ca_system_score_codex":0.000014436319,"about_ca_system_score_gemma":0.00009604421,"threshold_uncertainty_score":0.5685776},"labels":[],"label_agreement":null},{"id":"W2169331243","doi":"10.1016/j.molcel.2011.07.013","title":"Interaction of Arabidopsis DET1 with CCA1 and LHY in Mediating Transcriptional Repression in the Plant Circadian Clock","year":2011,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Light effects on plants","field":"Agricultural and Biological Sciences","cited_by":128,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Croucher Foundation; National Institutes of Health; National Science Foundation","keywords":"Biology; Psychological repression; Circadian clock; Transcription factor; Arabidopsis; Genetics; MYB; Photomorphogenesis; Corepressor; Cell biology; Repressor; Gene; Mutant; Gene expression","score_opus":0.020390362814962232,"score_gpt":0.18523507274726317,"score_spread":0.16484470993230094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169331243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980121,0.00010252496,0.0000042613215,0.00010030259,0.000021449705,0.00012715957,0.000008454692,0.0000043249147,0.0016193892],"genre_scores_gemma":[0.9997872,0.00001298823,0.00006778111,0.00008649889,0.000010340782,0.000008698908,0.000021462007,5.310111e-7,0.000004464131],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994193,0.00011153448,0.00011430316,0.00013891268,0.00011710341,0.00009885359],"domain_scores_gemma":[0.9998116,0.00007569122,0.00004914644,0.000032479747,0.000008167486,0.000022911488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018346259,0.00006003419,0.000077844896,0.000016664133,0.000020716714,0.00000780627,0.000088933026,0.000042222822,0.000024845494],"category_scores_gemma":[0.00001072178,0.00001962981,0.000016816482,0.00012355049,0.00002005207,0.000055051758,0.000009412446,0.000092754846,0.0000015560548],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007575491,0.000101038,0.0615678,0.000013583826,0.0000025838963,0.00006280252,0.001717688,0.0000072312973,0.9330057,0.000060246868,0.000008070189,0.0033775275],"study_design_scores_gemma":[0.0003021614,0.00023924913,0.735501,0.000085541884,0.0000073837655,0.000018507526,0.0006652939,0.00019549835,0.26249677,0.00014134942,0.00024170685,0.000105571795],"about_ca_topic_score_codex":0.0007024754,"about_ca_topic_score_gemma":0.001065519,"teacher_disagreement_score":0.67393315,"about_ca_system_score_codex":0.0000066556627,"about_ca_system_score_gemma":0.000002748587,"threshold_uncertainty_score":0.10619373},"labels":[],"label_agreement":null},{"id":"W2169532007","doi":"10.1016/j.molcel.2013.08.029","title":"Telomeric Noncoding RNA TERRA Is Induced by Telomere Shortening to Nucleate Telomerase Molecules at Short Telomeres","year":2013,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":233,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Telomere; Telomerase; Biology; RNA; Telomerase RNA component; Cell biology; Ribonucleoprotein; Telomere-binding protein; Telomerase reverse transcriptase; Genetics; DNA; Gene; DNA-binding protein","score_opus":0.013645784246985822,"score_gpt":0.24397427650262893,"score_spread":0.2303284922556431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169532007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9679122,0.0014478944,0.0011381259,0.001944405,0.00036143968,0.0021309373,0.00005741713,0.00049919635,0.024508376],"genre_scores_gemma":[0.97759825,0.00019002186,0.007416862,0.009964135,0.00019508286,0.00029976957,0.00014520803,0.00036563995,0.0038250077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99329853,0.00016942265,0.0012478856,0.0018955937,0.0014437746,0.001944783],"domain_scores_gemma":[0.9959508,0.00010468329,0.00023695726,0.0015787187,0.00039398472,0.0017348166],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00030174543,0.0012154421,0.0013967288,0.0008580695,0.0005265594,0.0002706885,0.00078314065,0.0004977562,0.0030583255],"category_scores_gemma":[0.00012695012,0.0011672442,0.0005652949,0.0016610175,0.00021696811,0.000400633,0.0006030356,0.00086563354,0.002959134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014199021,0.00035152162,0.0036002996,0.00019713384,0.00018042792,0.00052854687,0.0010141912,0.000018182103,0.9123986,0.000011945602,0.024531178,0.057026014],"study_design_scores_gemma":[0.0015327205,0.00074736954,0.0050757993,0.00028460837,0.00028040027,0.00016105498,0.00082785095,0.0008889714,0.9644393,0.000028932918,0.024068099,0.0016649391],"about_ca_topic_score_codex":0.0006196552,"about_ca_topic_score_gemma":0.0000126972145,"teacher_disagreement_score":0.055361077,"about_ca_system_score_codex":0.0005069204,"about_ca_system_score_gemma":0.00018632063,"threshold_uncertainty_score":0.99907774},"labels":[],"label_agreement":null},{"id":"W2170797477","doi":"10.1016/s1097-2765(00)00138-6","title":"Cytoskeletal Protein PSTPIP1 Directs the PEST-Type Protein Tyrosine Phosphatase to the c-Abl Kinase to Mediate Abl Dephosphorylation","year":2000,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chronic Myeloid Leukemia Treatments","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute","keywords":"Biology; Protein tyrosine phosphatase; Dephosphorylation; ABL; Phosphorylation; Phosphatase; Cell biology; Tyrosine phosphorylation; PEST analysis; Tyrosine kinase; Tyrosine; Biochemistry; Signal transduction; Botany","score_opus":0.006673850473986136,"score_gpt":0.23052373433268936,"score_spread":0.22384988385870322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170797477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97908807,0.0027190552,0.00028767902,0.0062815933,0.00012417167,0.006410943,0.00003712488,0.00013401532,0.0049173725],"genre_scores_gemma":[0.9816072,0.00003220375,0.0020667135,0.002803402,0.0001786704,0.000824893,0.0001788907,0.00010353503,0.01220448],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974128,0.00017331787,0.00038431748,0.00063854,0.0007380936,0.0006529528],"domain_scores_gemma":[0.9980783,0.00004041671,0.000091555,0.0012529385,0.00012396809,0.00041280963],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00037973488,0.00041487726,0.000344413,0.00007843669,0.00024096845,0.00007178096,0.00037241893,0.00013135088,0.001094907],"category_scores_gemma":[0.00020692969,0.00026071796,0.00015330393,0.0008129811,0.000069295864,0.00006779374,0.00008975092,0.0003500645,0.00275758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021558881,0.0011020777,0.00036999967,0.00026762483,0.00022609434,0.0022526076,0.0018170814,0.0017924878,0.84754354,0.00025019166,0.011027283,0.13119514],"study_design_scores_gemma":[0.002478923,0.0008432724,0.0011952455,0.00017500887,0.00017951783,0.000025540701,0.00003753046,0.00033167007,0.85255605,0.000047275742,0.14179249,0.00033744855],"about_ca_topic_score_codex":0.00065692025,"about_ca_topic_score_gemma":0.00008936169,"teacher_disagreement_score":0.13085769,"about_ca_system_score_codex":0.0005489306,"about_ca_system_score_gemma":0.00037493792,"threshold_uncertainty_score":0.9999845},"labels":[],"label_agreement":null},{"id":"W2179237675","doi":"10.1016/j.molcel.2015.11.006","title":"Targeting Mitosis in Cancer: Emerging Strategies","year":2015,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":496,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Biology; Mitosis; Cell cycle; Cancer; Cell cycle checkpoint; Computational biology; Genome instability; Cancer research; Bioinformatics; Cell biology; Genetics; DNA damage; DNA","score_opus":0.018378343178344428,"score_gpt":0.3073261492278631,"score_spread":0.2889478060495187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2179237675","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004349855,0.99543935,0.00067598524,0.000008001208,0.00025938495,0.00048068215,0.000052488787,0.00001541209,0.0026336857],"genre_scores_gemma":[0.00025144717,0.99744993,0.00048813445,0.00006205998,0.00021268225,0.00017323921,0.00081228634,0.00012003631,0.00043020368],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979392,0.00018305988,0.0005363109,0.0006871904,0.0001736677,0.00048054286],"domain_scores_gemma":[0.9990699,0.0000061542064,0.00025318106,0.00048711436,0.000072195035,0.00011145497],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00024052543,0.00050335604,0.000884645,0.00014982402,0.00003878536,0.000065628476,0.00045069907,0.00055313826,0.000018876244],"category_scores_gemma":[0.000018107728,0.00049271,0.00037866834,0.00023929721,0.00003925114,0.0000041861717,0.00025138227,0.00033413555,0.00002559977],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017817072,0.00027688095,0.000030276471,0.016914843,0.000363185,0.00022849708,0.000135162,0.0011161672,0.07750597,0.00006771576,0.010969942,0.89237356],"study_design_scores_gemma":[0.00019862285,0.000047826397,1.0353805e-7,0.00097117905,0.00019365065,0.00000514819,0.000073918716,0.000022560698,0.0018971838,0.000012499364,0.99603325,0.0005440367],"about_ca_topic_score_codex":0.000120845565,"about_ca_topic_score_gemma":0.000055529275,"teacher_disagreement_score":0.9850633,"about_ca_system_score_codex":0.00008346314,"about_ca_system_score_gemma":0.0007046955,"threshold_uncertainty_score":0.99975246},"labels":[],"label_agreement":null},{"id":"W2191719293","doi":"10.1016/j.molcel.2015.10.039","title":"EP400 Deposits H3.3 into Promoters and Enhancers during Gene Activation","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":149,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research","keywords":"Chromatin; Biology; Enhancer; ChIA-PET; Promoter; Histone H3; Histone; Nucleosome; Cell biology; Transcription (linguistics); Acetylation; Histone code; Histone-modifying enzymes; Pioneer factor; Transcription coregulator; Molecular biology; Chromatin remodeling; Transcription factor; Gene; Genetics; Gene expression","score_opus":0.003846120310723142,"score_gpt":0.1928419872073431,"score_spread":0.18899586689661996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2191719293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990428,0.000463553,0.007892506,0.0000720735,0.000059029913,0.00014401432,0.0000015880242,0.000010540083,0.00092869863],"genre_scores_gemma":[0.9943999,0.000055215118,0.0050625745,0.000111251524,0.0000441322,0.000012431882,0.00006796319,0.000028066539,0.00021844082],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930376,0.000027405385,0.00012038177,0.0002835555,0.0000960966,0.00016879017],"domain_scores_gemma":[0.99954647,0.0000013439578,0.000058725505,0.0002282225,0.000048470287,0.000116782256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006631839,0.00012957494,0.00008621633,0.000028443876,0.000053007883,0.000032443673,0.0000993679,0.00010589847,0.0000013539476],"category_scores_gemma":[0.00001390455,0.00013971444,0.000036432084,0.000046522087,0.00003261946,0.0000035600006,0.000115058116,0.00005476803,0.000004963319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002409057,0.000022724484,0.00027254707,0.000028305141,0.000017684892,0.000007837935,0.00014913664,0.0003425757,0.9984262,0.000006727722,0.000037133126,0.00066502084],"study_design_scores_gemma":[0.0005368653,0.00011526315,0.00041093605,0.0000063243797,0.000011458983,0.000011234936,0.000060776074,0.00036777757,0.99759495,0.00009391496,0.00061788585,0.0001726048],"about_ca_topic_score_codex":0.000021652135,"about_ca_topic_score_gemma":0.000010106457,"teacher_disagreement_score":0.003971928,"about_ca_system_score_codex":0.00003337999,"about_ca_system_score_gemma":0.000049238144,"threshold_uncertainty_score":0.5697389},"labels":[],"label_agreement":null},{"id":"W2195792396","doi":"10.1016/j.molcel.2015.11.002","title":"The Cohesin Complex Prevents the End Joining of Distant DNA Double-Strand Ends","year":2015,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; Ligue Contre le Cancer; Agence Nationale de la Recherche","keywords":"Biology; Cohesin; Genetics; Genome; DNA; DNA replication; Cell biology; Computational biology; Gene; Chromatin","score_opus":0.024224386479070468,"score_gpt":0.24934682900875257,"score_spread":0.2251224425296821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2195792396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9713205,0.00152389,0.0066517717,0.00026745882,0.00023049583,0.0004099915,0.000020437237,0.000016591322,0.019558825],"genre_scores_gemma":[0.99802464,0.000029005885,0.00057369965,0.00015895115,0.00004447744,0.000022338505,0.00006154669,0.00002985208,0.001055467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987679,0.00013916139,0.00025036873,0.0002678397,0.00030039542,0.00027430913],"domain_scores_gemma":[0.9990057,0.000016954406,0.00013473736,0.00066743314,0.0000767495,0.00009842877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050052017,0.00016470773,0.00014154916,0.000014997584,0.00010458018,0.000037269936,0.0004361504,0.000091163296,0.000012401465],"category_scores_gemma":[0.000029809871,0.00010507484,0.0001330936,0.000078009485,0.00015064703,0.0000023430787,0.0001818299,0.00009091176,0.0000074079003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014694459,0.000052049138,0.000060430986,0.000011897905,0.0000471341,0.000010341426,0.00011710367,0.00009032264,0.99700785,0.00046287512,0.0013158913,0.00067714683],"study_design_scores_gemma":[0.001068208,0.00021074049,0.000046635618,0.0000072041494,0.000030450563,0.000008499574,0.00019227788,0.00012673595,0.9262561,0.00038625902,0.07153926,0.00012760439],"about_ca_topic_score_codex":0.000018459095,"about_ca_topic_score_gemma":0.000015583566,"teacher_disagreement_score":0.070751734,"about_ca_system_score_codex":0.000014389791,"about_ca_system_score_gemma":0.0000889964,"threshold_uncertainty_score":0.42848277},"labels":[],"label_agreement":null},{"id":"W2224164996","doi":"10.1016/j.molcel.2015.12.013","title":"HELB Is a Feedback Inhibitor of DNA End Resection","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":150,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; U.S. Bureau of Land Management","keywords":"Biology; Resection; Homologous recombination; Helicase; Translocase; DNA; Downregulation and upregulation; DNA damage; DNA repair; Cell biology; Poly ADP ribose polymerase; Molecular biology; Genetics; Polymerase; Gene; RNA; Chromosomal translocation; Surgery","score_opus":0.005534681121458895,"score_gpt":0.2093668388175764,"score_spread":0.2038321576961175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2224164996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845213,0.0003546549,0.007153603,0.00017012376,0.00017960015,0.00015921886,0.000022766804,0.00001623872,0.007422488],"genre_scores_gemma":[0.9944053,0.000050074177,0.001019528,0.00023053406,0.00009124971,0.0000138875985,0.000014136384,0.000033880286,0.0041413875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990037,0.000057511454,0.0001866973,0.00035136638,0.00018478127,0.00021591793],"domain_scores_gemma":[0.99926054,0.000005638896,0.00008911333,0.00048692373,0.00008393112,0.00007384328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012424674,0.00013827224,0.0001228619,0.000046952013,0.000024575182,0.000007606922,0.00015605443,0.00016694548,0.00012915292],"category_scores_gemma":[0.000037038604,0.00011117142,0.00013975396,0.000078597695,0.000056573044,0.0000030672816,0.00012240023,0.00003986283,0.000066423556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007204964,0.000057264446,0.0000771863,0.000024076915,0.000022514507,0.000007837148,0.000020742398,9.42336e-7,0.995472,0.00005690443,0.0020260115,0.0021624658],"study_design_scores_gemma":[0.0006520337,0.00042957152,0.000045103763,0.000022637361,0.000013684194,0.000005746517,0.0000145497515,0.000004080847,0.9727521,0.00021926448,0.025693633,0.00014757385],"about_ca_topic_score_codex":0.000008961478,"about_ca_topic_score_gemma":0.00000508603,"teacher_disagreement_score":0.02366762,"about_ca_system_score_codex":0.000015987383,"about_ca_system_score_gemma":0.00004497567,"threshold_uncertainty_score":0.4533439},"labels":[],"label_agreement":null},{"id":"W2231683418","doi":"10.1016/j.molcel.2015.12.009","title":"TRF2-Mediated Control of Telomere DNA Topology as a Mechanism for Chromosome-End Protection","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":157,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; Ligue Contre le Cancer; Institute of Cancer Research; National Institutes of Health; Fondation ARC pour la Recherche sur le Cancer; Agence Nationale de la Recherche; Infrastructures en Biologie Santé et Agronomie","keywords":"Biology; Telomere; Mechanism (biology); Genetics; Chromosome; DNA; Cell biology; Computational biology; Gene","score_opus":0.009035536612572859,"score_gpt":0.22974301676289988,"score_spread":0.220707480150327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2231683418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9237599,0.00040523236,0.06784793,0.0029843203,0.00032978022,0.0022396913,0.00010718779,0.00012645996,0.0021995257],"genre_scores_gemma":[0.99718636,0.000061269595,0.00057395635,0.00081051665,0.00008877846,0.0001969834,0.000022989976,0.000046900703,0.0010122673],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851733,0.00007694345,0.00036222817,0.00039026642,0.00026359473,0.0003896539],"domain_scores_gemma":[0.9989273,0.00009220096,0.00017413183,0.00038867583,0.00024500632,0.00017269974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016082889,0.0002154141,0.00046476515,0.00017272329,0.000054512388,0.0000061662654,0.00011906055,0.0002240141,0.00027625225],"category_scores_gemma":[0.000321121,0.00015673088,0.00018993548,0.00017891142,0.00013003075,0.000047612757,0.000022074963,0.00010989169,0.0000980707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048124188,0.00022462434,0.00011941474,0.00017845588,0.000068517555,0.000082461374,0.00009222032,2.679003e-7,0.9891244,0.002618001,0.00006672581,0.0069436766],"study_design_scores_gemma":[0.00748529,0.0014855529,0.0001985095,0.000093964176,0.0001097868,0.00007234603,0.0000737517,0.00008159531,0.981809,0.002080308,0.0063053863,0.00020450549],"about_ca_topic_score_codex":0.000060627608,"about_ca_topic_score_gemma":0.000008439605,"teacher_disagreement_score":0.07342647,"about_ca_system_score_codex":0.00006473419,"about_ca_system_score_gemma":0.0001543024,"threshold_uncertainty_score":0.63912994},"labels":[],"label_agreement":null},{"id":"W2278379148","doi":"10.1016/j.molcel.2016.01.019","title":"PARP1 Links CHD2-Mediated Chromatin Expansion and H3.3 Deposition to DNA Repair by Non-homologous End-Joining","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":273,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Chromatin; Biology; Cell biology; Chromatin remodeling; Histone; PARP1; DNA; Genome instability; DNA repair; Non-homologous end joining; Polymerase; Poly ADP ribose polymerase; Genetics; Molecular biology; DNA damage","score_opus":0.0031708361739157223,"score_gpt":0.19840287149487207,"score_spread":0.19523203532095634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2278379148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.965285,0.00053460937,0.032260764,0.0002543994,0.000121514306,0.00036602552,0.000029357432,0.00010412426,0.0010441734],"genre_scores_gemma":[0.99077815,0.000082691105,0.006888651,0.001268537,0.00006431481,0.000072306306,0.00018454401,0.00006498412,0.0005958477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983327,0.00010984923,0.00027747898,0.0006768434,0.00020241909,0.0004007169],"domain_scores_gemma":[0.9990681,0.000019846128,0.00009885332,0.0005223012,0.00006273849,0.00022815652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002106118,0.00026406092,0.00020635722,0.000062263636,0.00008401682,0.000029151382,0.00015814451,0.000424329,0.000034220706],"category_scores_gemma":[0.000086564956,0.00022468004,0.000113322,0.00009530878,0.00005113132,0.00000819371,0.00021787555,0.00011154362,0.00007377262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004750804,0.000060501334,0.000102285594,0.00002377231,0.000025769323,0.000072539464,0.00005144507,0.0000032449836,0.9925669,0.000005319272,0.0028110845,0.004229647],"study_design_scores_gemma":[0.0007993721,0.00075333624,0.00015507783,0.000053949814,0.000025188407,0.000034048553,0.0000311226,0.00012215019,0.9927114,0.000026183134,0.0049565956,0.00033155456],"about_ca_topic_score_codex":0.000021038411,"about_ca_topic_score_gemma":0.0000070229376,"teacher_disagreement_score":0.025493093,"about_ca_system_score_codex":0.000030042123,"about_ca_system_score_gemma":0.00004581777,"threshold_uncertainty_score":0.91621864},"labels":[],"label_agreement":null},{"id":"W2288948619","doi":"10.1016/j.molcel.2016.02.013","title":"A Specialized Mechanism of Translation Mediated by FXR1a-Associated MicroRNP in Cellular Quiescence","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences","keywords":"EIF4G; Biology; Cell biology; Translation (biology); EIF4E; Repressor; Xenopus; Poly(A)-binding protein; microRNA; Untranslated region; Three prime untranslated region; Messenger RNA; Downregulation and upregulation; Molecular biology; Genetics; Gene expression; Gene","score_opus":0.008127054053792781,"score_gpt":0.22573603959420904,"score_spread":0.21760898554041627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288948619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97767776,0.00089214847,0.019885218,0.0001785792,0.000038049155,0.00023969238,0.000047218917,0.000009108121,0.0010322151],"genre_scores_gemma":[0.9984042,0.00022311056,0.00030004664,0.00007258717,0.000015190324,0.000012546313,0.00012951263,0.00002583793,0.0008169717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986753,0.00016005783,0.000279673,0.00031454896,0.00023146739,0.00033894661],"domain_scores_gemma":[0.99946994,0.000021885833,0.00009631565,0.0002539539,0.000069778165,0.000088115674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029366574,0.00014437184,0.00018899726,0.00007547763,0.000023965027,0.00000893681,0.00020824473,0.00018502322,0.00004811112],"category_scores_gemma":[0.00009645413,0.00012063103,0.00009899083,0.00016787002,0.000059072943,0.000004528215,0.000044296623,0.00006962261,0.000014234807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008998375,0.00010142245,0.00029285686,0.00001404543,0.00001836773,0.000016821561,0.000027644226,0.0000015962758,0.99836123,0.000041900636,0.000288383,0.0007457691],"study_design_scores_gemma":[0.001876851,0.00016553898,0.0000614241,0.00003177128,0.000007339196,4.9357067e-7,0.000017140366,0.00007414329,0.995565,0.000096602926,0.0019491958,0.00015450253],"about_ca_topic_score_codex":0.0000880851,"about_ca_topic_score_gemma":0.00005596759,"teacher_disagreement_score":0.020726426,"about_ca_system_score_codex":0.000028652732,"about_ca_system_score_gemma":0.00006666727,"threshold_uncertainty_score":0.49191907},"labels":[],"label_agreement":null},{"id":"W2290268596","doi":"10.1016/j.molcel.2016.02.005","title":"System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":173,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; Structural Genomics Consortium; University of New Brunswick; University Health Network; University of Toronto; SickKids Foundation; Hospital for Sick Children; York University","funders":"Eshelman Institute for Innovation, University of North Carolina at Chapel Hill; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institutes of Health; Novartis Pharma; Canada Foundation for Innovation; Ontario Ministry of Economic Development and Innovation; Wellcome Trust; American Lebanese Syrian Associated Charities; Fundação de Amparo à Pesquisa do Estado de São Paulo; Genome Canada; National Cancer Institute; AbbVie; Canadian Institutes of Health Research; Innovative Medicines Initiative; Wellcome; Pfizer; Boehringer Ingelheim; U.S. Department of Energy; Howard Hughes Medical Institute","keywords":"Ubiquitin; Biology; NEDD4; Subfamily; Ubiquitin ligase; Computational biology; Cell biology; Ubiquitin-Protein Ligases; Genetics; Gene","score_opus":0.0053550756571722185,"score_gpt":0.19386082664200535,"score_spread":0.18850575098483313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2290268596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94116026,0.00038458392,0.047789108,0.00007340462,0.000037024245,0.00047062495,0.00004082961,0.000031706775,0.010012458],"genre_scores_gemma":[0.99745834,0.00001890481,0.0016814192,0.00007375165,0.000058481008,0.00006755165,0.00003300243,0.00003894137,0.0005695874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883574,0.00012676886,0.00021765268,0.00038243525,0.00018255108,0.00025482546],"domain_scores_gemma":[0.9992198,0.000020694728,0.00015551574,0.00035961953,0.00016868491,0.0000757173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016624524,0.00019056186,0.00018925594,0.000052724314,0.000048237114,0.000012964896,0.00015210532,0.00012679976,0.000011059651],"category_scores_gemma":[0.00004636728,0.0001303311,0.00008723752,0.000104313964,0.00006858863,0.0000050636277,0.00006488301,0.000049217717,0.000013576315],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014405108,0.00006515857,0.0008427829,0.00011769223,0.0000495099,0.000030967818,0.000042349973,0.00007828806,0.99731994,0.00036145403,0.00009908049,0.0008487254],"study_design_scores_gemma":[0.0007487977,0.00072173454,0.00046844932,0.00013240123,0.000030744497,0.000029555027,0.00003705612,0.000051963256,0.9962006,0.00007133352,0.0012935871,0.00021378497],"about_ca_topic_score_codex":0.000025994983,"about_ca_topic_score_gemma":0.0000091189895,"teacher_disagreement_score":0.0562981,"about_ca_system_score_codex":0.000025694553,"about_ca_system_score_gemma":0.00010557982,"threshold_uncertainty_score":0.53147477},"labels":[],"label_agreement":null},{"id":"W2297344571","doi":"10.1016/j.molcel.2016.02.012","title":"Resources for the Comprehensive Discovery of Functional RNA Elements","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":158,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"National Institute of Neurological Disorders and Stroke; National Human Genome Research Institute; Damon Runyon Cancer Research Foundation; National Institutes of Health; National Science Foundation","keywords":"Biology; Computational biology; Immunoprecipitation; RNA; Small hairpin RNA; RNA-binding protein; Transcriptome; ENCODE; Antibody; Gene; Gene expression; Genetics","score_opus":0.01349075589591841,"score_gpt":0.2487587456490736,"score_spread":0.2352679897531552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2297344571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9174442,0.00095328613,0.0804184,0.00027259358,0.000051674342,0.00019725651,0.00003138963,0.0000023648367,0.00062882935],"genre_scores_gemma":[0.99263257,0.00008903788,0.00024999867,0.00019172026,0.00007005016,0.00003004773,0.000015872783,0.000012758489,0.0067079547],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993594,0.000031129974,0.000121771,0.00016760438,0.00014560285,0.00017445302],"domain_scores_gemma":[0.99953824,0.000044649794,0.00005346546,0.00024525198,0.00008667645,0.00003172584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009043163,0.000074385964,0.00006925795,0.00001839945,0.000058296744,0.000012637125,0.0001503939,0.0000400709,0.0000118661],"category_scores_gemma":[0.00004008191,0.000041210766,0.000106823354,0.000031457912,0.00007596512,0.000002667021,0.00008541155,0.000026016347,0.0000039266915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013659796,0.000021988246,0.00029381877,0.000013638707,0.00004662114,0.0000010846926,0.0000047706635,0.000031102074,0.9947564,0.000074720294,0.0022166239,0.0024026176],"study_design_scores_gemma":[0.00070732395,0.00019198708,0.0009976067,0.000008741877,0.000011163864,8.318538e-7,0.00004052656,0.00004464673,0.9381864,0.00006290945,0.059681155,0.000066701585],"about_ca_topic_score_codex":0.000008359722,"about_ca_topic_score_gemma":0.000003096733,"teacher_disagreement_score":0.0801684,"about_ca_system_score_codex":0.0000058147807,"about_ca_system_score_gemma":0.000028540007,"threshold_uncertainty_score":0.16805263},"labels":[],"label_agreement":null},{"id":"W2347118546","doi":"10.1016/j.molcel.2016.03.031","title":"The TIP60 Complex Regulates Bivalent Chromatin Recognition by 53BP1 through Direct H4K20me Binding and H2AK15 Acetylation","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":267,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Université Laval; Lunenfeld-Tanenbaum Research Institute; Centre hospitalier universitaire de Québec","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; Agence Nationale de la Recherche; National Cancer Institute; Compute Canada","keywords":"Biology; Chromatin; Acetylation; Homologous recombination; Histone; Cell biology; DNA repair; Genetics; DNA; Molecular biology; Gene","score_opus":0.00895117194564593,"score_gpt":0.2070641871390911,"score_spread":0.19811301519344518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2347118546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917509,0.0013799648,0.0032793037,0.000490711,0.00008286764,0.00022662092,0.00008112462,0.000019903684,0.0026886214],"genre_scores_gemma":[0.99578154,0.0010664676,0.0016061215,0.00012452852,0.00005419269,0.00002091017,0.000328622,0.00003802798,0.0009795853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895304,0.000085501335,0.0002244312,0.00034749354,0.00012773527,0.00026177583],"domain_scores_gemma":[0.99939996,0.000031490952,0.0001373451,0.00032358398,0.00005132683,0.00005628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017635834,0.0001820074,0.00012372846,0.00001784401,0.00020989658,0.000063553955,0.0001489,0.00012334067,0.000019199537],"category_scores_gemma":[0.000036657293,0.00012420857,0.00007153545,0.00006405868,0.0001074149,0.000006351388,0.0000956998,0.000046025867,0.00002640157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016749995,0.000022400136,0.000106765096,0.000015613936,0.00002851789,0.0000014625789,0.000029372839,0.000006699762,0.9892593,0.000022888436,0.0022807464,0.008209461],"study_design_scores_gemma":[0.00063715247,0.00014457664,0.00038207846,0.000026604608,0.000026222751,0.000008197388,0.000042162803,0.00026451872,0.96116316,0.0005193476,0.03653899,0.00024699947],"about_ca_topic_score_codex":0.0000107512205,"about_ca_topic_score_gemma":0.000008086814,"teacher_disagreement_score":0.034258243,"about_ca_system_score_codex":0.000028896338,"about_ca_system_score_gemma":0.00002012862,"threshold_uncertainty_score":0.5065079},"labels":[],"label_agreement":null},{"id":"W2383534773","doi":"10.1016/j.molcel.2016.04.030","title":"Global Mapping of Human RNA-RNA Interactions","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":407,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; RNA; Computational biology; RNA editing; Non-coding RNA; Genetics; Gene","score_opus":0.012085559260740059,"score_gpt":0.2808641488447676,"score_spread":0.26877858958402756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2383534773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9591307,0.00022477315,0.016314365,0.00013951049,0.000051874824,0.00008096737,0.000013577866,0.000007563029,0.024036653],"genre_scores_gemma":[0.9952566,0.000027386279,0.0004286372,0.000081812366,0.000049899925,0.0000068209215,0.00001403747,0.000011715125,0.0041230717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922913,0.000045523448,0.00015543067,0.00021492317,0.00012939579,0.00022557075],"domain_scores_gemma":[0.9994675,0.000004992106,0.00005779576,0.00031285707,0.00006923645,0.00008764468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008723599,0.000093469556,0.0000949057,0.00003554073,0.00004855646,0.0000104623205,0.00018163813,0.000056817218,0.00005430314],"category_scores_gemma":[0.00003547911,0.00007289654,0.00010824734,0.00008374046,0.000057017936,0.0000031084733,0.000119412536,0.000037983245,0.000020988748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012982335,0.000037013604,0.0010343872,0.000012448459,0.000024349854,0.000011771243,0.0000058083965,0.000004493039,0.9929175,0.000117198564,0.0009773592,0.004844704],"study_design_scores_gemma":[0.00040518047,0.0001275664,0.0006873915,0.00002494063,0.000005239603,0.0000036306335,0.000025037638,0.000007899126,0.9892076,0.00012224588,0.009283154,0.00010008764],"about_ca_topic_score_codex":0.00004683073,"about_ca_topic_score_gemma":0.000022347534,"teacher_disagreement_score":0.036125902,"about_ca_system_score_codex":0.00002178299,"about_ca_system_score_gemma":0.000036057136,"threshold_uncertainty_score":0.29726344},"labels":[],"label_agreement":null},{"id":"W2410440539","doi":"10.1016/j.molcel.2016.05.025","title":"Visualizing Clonal Evolution in Cancer","year":2016,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Biology; Somatic evolution in cancer; Evolutionary biology; Computational biology; Cancer; Genetics","score_opus":0.017015446803171512,"score_gpt":0.32085599955436817,"score_spread":0.30384055275119665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410440539","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018080053,0.99537665,0.0015336209,0.000013369845,0.00035215504,0.00035190716,0.00014338667,0.00000676621,0.0020413613],"genre_scores_gemma":[0.0005673296,0.99785024,0.00010720509,0.000103236554,0.0003591023,0.00016595922,0.00023396635,0.00008428231,0.0005286783],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984955,0.000088968634,0.00037788495,0.00055645366,0.00013034717,0.0003508482],"domain_scores_gemma":[0.99925846,0.000019393234,0.00018466603,0.0004103272,0.000040637173,0.000086523374],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012323947,0.00033554656,0.0005483345,0.00011992655,0.000029185023,0.000024439041,0.00026568462,0.00041192115,0.000041907635],"category_scores_gemma":[0.000036559202,0.00029491205,0.00034906933,0.00013106568,0.000040377814,0.0000013992892,0.00019396238,0.00015127355,0.00005974437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000217297,0.0001606185,0.000052596803,0.0047351215,0.00013731807,0.00011311923,0.000012240706,0.00003710182,0.015211649,0.0006051311,0.003114631,0.9757987],"study_design_scores_gemma":[0.00026693297,0.00005718456,0.0000033467243,0.0018348743,0.00009499522,0.000005772354,0.0000019066359,0.0000020092018,0.0014307899,0.00004930009,0.99585724,0.00039562027],"about_ca_topic_score_codex":0.00008100726,"about_ca_topic_score_gemma":0.00006450857,"teacher_disagreement_score":0.99274266,"about_ca_system_score_codex":0.00020341914,"about_ca_system_score_gemma":0.00058055064,"threshold_uncertainty_score":0.9999503},"labels":[],"label_agreement":null},{"id":"W2410616080","doi":"10.1016/j.molcel.2016.03.029","title":"Long Terminal Repeats: From Parasitic Elements to Building Blocks of the Transcriptional Regulatory Repertoire","year":2016,"lang":"en","type":"review","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":330,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Eye Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Repertoire; Terminal (telecommunication); Genetics; Computational biology; Long terminal repeat; Evolutionary biology; Cell biology; Gene; Genome","score_opus":0.00894375105038294,"score_gpt":0.29464719800650163,"score_spread":0.2857034469561187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410616080","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011971221,0.9742591,0.012464726,0.000017219083,0.0003198799,0.0005052627,0.00015526018,0.000009798324,0.00029756493],"genre_scores_gemma":[0.03351553,0.96004045,0.0031690702,0.00017601947,0.00047787253,0.00014012818,0.00027027781,0.00017392053,0.0020367561],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981368,0.000098268516,0.000570669,0.00060824415,0.00028276298,0.00030325862],"domain_scores_gemma":[0.99865454,0.000013711693,0.00018493198,0.0009858628,0.000050192215,0.0001107504],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013948929,0.00037560877,0.00055159506,0.000065437496,0.00005636138,0.000015622747,0.00053723087,0.00029855562,0.00004474481],"category_scores_gemma":[0.000033268687,0.00027002345,0.00062929216,0.00010544958,0.00005333238,0.0000016406609,0.00013230093,0.00014824356,0.000007408784],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015639316,0.000072792,0.000059926366,0.0019725973,0.0003007735,0.000053290656,0.000026726984,0.00006802358,0.6214344,0.000018917533,0.00048663712,0.37549028],"study_design_scores_gemma":[0.00023968042,0.00007457609,0.00006561274,0.0037092655,0.00037530402,0.00002807925,0.0000039101647,0.000002594379,0.176069,0.000017765706,0.8189973,0.00041688886],"about_ca_topic_score_codex":0.000006503241,"about_ca_topic_score_gemma":0.0000031281643,"teacher_disagreement_score":0.81851065,"about_ca_system_score_codex":0.000040021678,"about_ca_system_score_gemma":0.00017190141,"threshold_uncertainty_score":0.9999752},"labels":[],"label_agreement":null},{"id":"W2410882188","doi":"10.1016/j.molcel.2016.04.033","title":"Chromatin-Bound MDM2 Regulates Serine Metabolism and Redox Homeostasis Independently of p53","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":137,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal","funders":"Université de Montpellier; Institut National Du Cancer; Ligue Contre le Cancer; Fondation ARC pour la Recherche sur le Cancer; Institut National de la Santé et de la Recherche Médicale","keywords":"Biology; Chromatin; Mdm2; Serine; PKM2; Cell biology; NAD+ kinase; Chromatin remodeling; Transcription factor; Biochemistry; Glycolysis; Metabolism; Pyruvate kinase; Gene; Phosphorylation; Enzyme","score_opus":0.0059205945062860655,"score_gpt":0.2146799374858468,"score_spread":0.20875934297956072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410882188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98120964,0.011380803,0.0014673965,0.0005921035,0.00015684431,0.00046167176,0.000040058585,0.00007653611,0.004614953],"genre_scores_gemma":[0.9963999,0.00045759938,0.0018668112,0.00015522029,0.00004313029,0.000018650462,0.000018371757,0.000078182195,0.0009621358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982155,0.00007146767,0.0004162739,0.00046367396,0.0004743052,0.00035875308],"domain_scores_gemma":[0.99870104,0.00003406648,0.00019421247,0.00069428614,0.00014914054,0.00022725468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019871787,0.0002732454,0.0005185186,0.00020973527,0.000044179815,0.000018434388,0.00013211947,0.00020190509,0.00023519956],"category_scores_gemma":[0.00008684376,0.00021051851,0.00016971253,0.0002768486,0.00018919425,0.000072405965,0.00014394223,0.00016018479,0.000042130727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009747539,0.00010019826,0.0002056413,0.00016783456,0.0001453691,0.00024830337,0.00011247357,0.0000042416623,0.9825116,0.00027003651,0.00029294754,0.015843915],"study_design_scores_gemma":[0.0035433837,0.00023531356,0.00409581,0.0002434646,0.00030612494,0.00010472331,0.000027137567,0.000023411172,0.9817183,0.0004334273,0.009021731,0.0002471932],"about_ca_topic_score_codex":0.00006540389,"about_ca_topic_score_gemma":0.000011472786,"teacher_disagreement_score":0.015596721,"about_ca_system_score_codex":0.00006920045,"about_ca_system_score_gemma":0.00012454066,"threshold_uncertainty_score":0.8584696},"labels":[],"label_agreement":null},{"id":"W2411724331","doi":"10.1016/j.molcel.2016.05.010","title":"Cutoff Suppresses RNA Polymerase II Termination to Ensure Expression of piRNA Precursors","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":164,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Piwi-interacting RNA; Cell biology; Polymerase; RNA polymerase; RNA; Molecular biology; Genetics; RNA interference; Gene","score_opus":0.006188132222524633,"score_gpt":0.19512305131764038,"score_spread":0.18893491909511576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411724331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536926,0.00012132488,0.000098853816,0.0016044489,0.00006786305,0.00015275223,0.00006986162,0.000022793452,0.00249282],"genre_scores_gemma":[0.99841976,0.000010588506,0.00026625456,0.00009541668,0.00005301169,0.000013740595,0.000017191744,0.000001090966,0.0011229301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992813,0.000047864327,0.00014572125,0.00020326005,0.00017215611,0.00014968312],"domain_scores_gemma":[0.99966985,0.000050279647,0.00006308565,0.00007296668,0.000055526227,0.00008831318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004693609,0.0000926935,0.00009583846,0.000012997855,0.000090180154,0.000010854582,0.00015907102,0.000060578666,0.0005567507],"category_scores_gemma":[0.000036604375,0.000031487554,0.00006526832,0.00014583646,0.000019877167,0.000043490374,0.00009487676,0.000025216563,0.000026197997],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009489157,0.00008953989,0.0003312524,0.000003772416,0.0000018797281,0.0000029760834,0.000084179635,0.0000042048805,0.9687098,0.000038445934,0.00025799611,0.030466437],"study_design_scores_gemma":[0.000124544,0.00022882012,0.009505038,0.000036081805,0.000008143024,9.884739e-7,0.00002004777,0.0000036304189,0.98077303,0.00022771255,0.008970816,0.00010114449],"about_ca_topic_score_codex":0.00004182439,"about_ca_topic_score_gemma":0.00002148529,"teacher_disagreement_score":0.030365294,"about_ca_system_score_codex":0.000008092714,"about_ca_system_score_gemma":0.000006350437,"threshold_uncertainty_score":0.6096029},"labels":[],"label_agreement":null},{"id":"W2474252696","doi":"10.1016/j.molcel.2012.03.002","title":"RETRACTED: Lysyl Oxidase-like 2 Deaminates Lysine 4 in Histone H3","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":true,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Histone H3; Biology; H3K4me3; Biochemistry; Lysine; Histone; Deamination; Hydroxylation; Enzyme; Promoter; Amino acid; Gene; Gene expression","score_opus":0.004722522111230793,"score_gpt":0.2191526299002267,"score_spread":0.2144301077889959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474252696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98650783,0.0073243733,0.0017937094,0.000058764854,0.0005784406,0.00013790985,0.000014815197,0.000018142086,0.0035660313],"genre_scores_gemma":[0.9953139,0.00016508631,0.0008976997,0.00060786854,0.00026514137,0.000014323876,0.00026723088,0.000039251467,0.0024294876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884593,0.00008550724,0.00021892079,0.00029870213,0.00012472416,0.0004262126],"domain_scores_gemma":[0.9993745,0.0000046391965,0.0000708912,0.0003848495,0.000043803753,0.00012132785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024276495,0.00019231135,0.00017034242,0.0000924322,0.000039526534,0.00001159535,0.00014210127,0.00026237377,0.00009760995],"category_scores_gemma":[0.00004250055,0.00019952745,0.000096989585,0.00017973478,0.00004178061,0.000009085628,0.000082448845,0.00016087605,0.000106597305],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042940777,0.00019322764,0.0012842526,0.000022298533,0.000010845604,0.000010158535,0.00003876147,0.00002102649,0.9896826,0.00002886666,0.007658143,0.001006883],"study_design_scores_gemma":[0.0004403194,0.000050191975,0.0029893816,0.000005855013,0.000022717571,0.000008956525,0.000017741691,0.0000073852248,0.74523056,0.000008585546,0.25101832,0.00019998508],"about_ca_topic_score_codex":0.00007270236,"about_ca_topic_score_gemma":0.000017856026,"teacher_disagreement_score":0.24445203,"about_ca_system_score_codex":0.000025600117,"about_ca_system_score_gemma":0.000025886917,"threshold_uncertainty_score":0.8136493},"labels":[],"label_agreement":null},{"id":"W2503158277","doi":"10.1016/j.molcel.2016.06.030","title":"Cerebellar Ataxia and Coenzyme Q Deficiency through Loss of Unorthodox Kinase Activity","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Coenzyme Q10 studies and effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. National Library of Medicine; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institute on Aging; Fondation pour la Recherche Médicale; École Polytechnique Fédérale de Lausanne; Labex; Institute of Genetics; Michigan Economic Development Corporation; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; U.S. Department of Energy; Agence Nationale de la Recherche; European Research Council; National Science Foundation","keywords":"Biology; Ataxia; Cerebellar ataxia; Kinase; Cell biology; Genetics; Neuroscience","score_opus":0.007376333755932929,"score_gpt":0.2283852467329178,"score_spread":0.22100891297698486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2503158277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9745194,0.004633721,0.019212337,0.00018193093,0.00007603609,0.00017269666,0.000031878368,0.0000100413,0.0011620129],"genre_scores_gemma":[0.9980887,0.00077756227,0.00062610017,0.000119575525,0.000042933996,0.000009649067,0.0000072941066,0.00002443366,0.00030373875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989296,0.000069734924,0.00014721284,0.0004157003,0.00014215149,0.0002955634],"domain_scores_gemma":[0.99931085,0.000023840454,0.00009377878,0.0004363806,0.00006448744,0.00007067684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012208245,0.0001917812,0.0001992212,0.000021168586,0.00007311412,0.000008514201,0.00013796044,0.00011460992,0.000015224762],"category_scores_gemma":[0.00005471451,0.00014425907,0.00010203138,0.00008510024,0.0001814749,0.000004761388,0.00026725818,0.000049126997,0.000008461256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000748313,0.00008624853,0.0030924126,0.00006666926,0.000023416513,0.000028192211,0.000030475658,0.0000039346373,0.9903063,0.00013377954,0.0049778107,0.0011759275],"study_design_scores_gemma":[0.0007642448,0.00038068334,0.0015850605,0.000019379493,0.000030014693,0.000009303195,0.000014903124,0.0000046051687,0.965137,0.00007421443,0.03176589,0.00021471771],"about_ca_topic_score_codex":0.00006615646,"about_ca_topic_score_gemma":0.000025149156,"teacher_disagreement_score":0.026788078,"about_ca_system_score_codex":0.000010359266,"about_ca_system_score_gemma":0.000033269887,"threshold_uncertainty_score":0.5882714},"labels":[],"label_agreement":null},{"id":"W2511736040","doi":"10.1016/j.molcel.2016.07.008","title":"Molecular Principles of Gene Fusion Mediated Rewiring of Protein Interaction Networks in Cancer","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research","keywords":"Biology; Interaction network; Fusion protein; Gene; Protein–protein interaction; Fusion gene; Computational biology; Genetics; Cell biology","score_opus":0.010111843729091819,"score_gpt":0.23724782476990827,"score_spread":0.22713598104081645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2511736040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97203255,0.0014481585,0.025070028,0.00009694629,0.00007764426,0.0003315538,0.000008904479,0.000007129375,0.0009270706],"genre_scores_gemma":[0.9987745,0.00019602675,0.00066718494,0.00004888999,0.000023994822,0.000051717594,0.00003750504,0.00002345277,0.00017669683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989455,0.00009626803,0.00036116276,0.00026597964,0.00015582977,0.00017526832],"domain_scores_gemma":[0.9993236,0.000006863663,0.0002274615,0.00029564512,0.000098039745,0.000048367678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016175787,0.000132207,0.00016076927,0.000091368245,0.00001255999,0.000003969517,0.00014639737,0.00014995346,0.000028930204],"category_scores_gemma":[0.00008281531,0.000107649634,0.00008462953,0.00014562652,0.000052595653,0.000006381762,0.00009004544,0.000066482586,0.0000017406784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008188546,0.000072722854,0.00084463775,0.000031815405,0.000014678749,0.0000064915303,0.000012724821,0.0012028129,0.99441475,0.000050894156,0.000013560089,0.0032530278],"study_design_scores_gemma":[0.0006735237,0.00012996388,0.0003949518,0.00014591873,0.000007022053,9.0989266e-7,0.00001093564,0.00037545114,0.9953044,0.000010002654,0.0028173598,0.00012953208],"about_ca_topic_score_codex":0.00007098397,"about_ca_topic_score_gemma":0.000027923927,"teacher_disagreement_score":0.026741968,"about_ca_system_score_codex":0.00002729909,"about_ca_system_score_gemma":0.00005559286,"threshold_uncertainty_score":0.4389825},"labels":[],"label_agreement":null},{"id":"W2512450462","doi":"10.1016/j.molcel.2016.07.003","title":"Cryo-EM of Mitotic Checkpoint Complex-Bound APC/C Reveals Reciprocal and Conformational Regulation of Ubiquitin Ligation","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":163,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; Ubiquitin; Mitosis; Reciprocal; Cell biology; Ubiquitin ligase; Ligation; Biophysics; Genetics; Molecular biology","score_opus":0.00815758915504954,"score_gpt":0.2187140806442229,"score_spread":0.21055649148917335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512450462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.964537,0.00021214552,0.033870112,0.000084139676,0.000032337062,0.00019045101,0.00003454504,0.000004394361,0.0010348393],"genre_scores_gemma":[0.99702287,0.00006728788,0.0022861508,0.00008920615,0.000031643813,0.0000070424567,0.00016665504,0.000013643507,0.00031551212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914473,0.000048252747,0.0003622454,0.00018523763,0.0001331881,0.0001263424],"domain_scores_gemma":[0.99933183,0.000013136272,0.00022859816,0.00022092329,0.00015917831,0.000046320954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001723292,0.00011084207,0.00015784144,0.00004566645,0.000026772046,0.000008440942,0.000086161686,0.0001271778,0.0000234621],"category_scores_gemma":[0.000045115292,0.00009421991,0.00007157758,0.000048877504,0.00010134593,0.000006973128,0.00006532471,0.000031007396,0.0000033426431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044511205,0.000036368496,0.00043763767,0.00010640379,0.000016686517,3.7908958e-7,0.000051127983,0.00002163539,0.9967354,0.0005809529,0.00021125944,0.0017576173],"study_design_scores_gemma":[0.00065301865,0.00016376752,0.006383025,0.000048565536,0.000022363507,0.0000061195515,0.00003170741,0.00016375465,0.9906081,0.00071046693,0.0010912779,0.00011781703],"about_ca_topic_score_codex":0.00000554477,"about_ca_topic_score_gemma":0.0000040860505,"teacher_disagreement_score":0.03248582,"about_ca_system_score_codex":0.000012000333,"about_ca_system_score_gemma":0.000046862977,"threshold_uncertainty_score":0.38421765},"labels":[],"label_agreement":null},{"id":"W2529800031","doi":"10.1016/j.molcel.2016.09.024","title":"53BP1 Goes Back to Its p53 Roots","year":2016,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Biology; Cell biology; Computational biology","score_opus":0.011307752876844318,"score_gpt":0.23083315411328734,"score_spread":0.219525401236443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529800031","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023365624,0.0059205517,0.0065125395,0.7811251,0.0023701498,0.0029515934,0.00027644742,0.00033883943,0.19816819],"genre_scores_gemma":[0.0026225087,0.0001440534,0.0014116178,0.8847524,0.004331704,0.00014828432,0.0005668635,0.000577806,0.10544478],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99574125,0.0001460998,0.0005738586,0.001301168,0.0010645184,0.0011731287],"domain_scores_gemma":[0.99726325,0.0000528523,0.00021570512,0.0017482865,0.00028329692,0.0004366205],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001524713,0.000829819,0.00096139003,0.00046715702,0.00006128026,0.000060453007,0.0005098622,0.0016499346,0.0022692746],"category_scores_gemma":[0.000104311286,0.0007197544,0.0006449432,0.0003946674,0.00006820136,0.000042591684,0.00027800535,0.0019409829,0.019718146],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045564597,0.000032045264,0.000004015927,0.00042453644,0.0001408969,0.0077318633,0.000031336553,0.0000058459605,0.23829706,0.0000060671155,0.751747,0.001533747],"study_design_scores_gemma":[0.0012878402,0.00030682958,0.000009870287,0.0006710327,0.00030946775,0.000117750256,0.0000021075375,0.000006255419,0.21650997,0.000027146465,0.78010184,0.0006498773],"about_ca_topic_score_codex":0.000031059997,"about_ca_topic_score_gemma":0.0000044668463,"teacher_disagreement_score":0.10362726,"about_ca_system_score_codex":0.00049603236,"about_ca_system_score_gemma":0.0004383256,"threshold_uncertainty_score":0.9996461},"labels":[],"label_agreement":null},{"id":"W2532168152","doi":"10.1016/j.molcel.2016.09.002","title":"Tail and Kinase Modules Differently Regulate Core Mediator Recruitment and Function In Vivo","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":138,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Mediator; Biology; RNA polymerase II; Coactivator; Cell biology; Promoter; Function (biology); Genetics; Gene; Transcription factor; Gene expression","score_opus":0.01055339288845378,"score_gpt":0.20678136262183977,"score_spread":0.196227969733386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2532168152","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966657,0.0011528087,0.0014972577,0.00011696369,0.00006856091,0.0002098487,0.000021170043,0.000005972585,0.0002616908],"genre_scores_gemma":[0.99821347,0.0006654824,0.00038783508,0.00009841576,0.000027880218,0.000030348845,0.000022744722,0.000021796739,0.0005320203],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992721,0.00002891358,0.000138816,0.0003166427,0.00007078844,0.00017272931],"domain_scores_gemma":[0.9996176,0.00000565362,0.0000515825,0.0002246046,0.000019879304,0.00008068616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007308217,0.00013910193,0.00011087779,0.00003558851,0.000029231918,0.000016382479,0.000060947088,0.00011363434,0.000012518648],"category_scores_gemma":[0.000011081765,0.000108362256,0.000027830285,0.000027913518,0.000055144723,0.0000023351117,0.00010989694,0.00003447689,0.000002043121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000395548,0.000033473414,0.0042435317,0.000021435491,0.000012103195,0.000010032465,0.00001964413,0.000007076698,0.98985374,0.00012996132,0.00009810605,0.005531348],"study_design_scores_gemma":[0.0021209805,0.00041060097,0.016247382,0.000038048995,0.000033513814,0.0000094442175,0.000055959445,0.0005425776,0.96931154,0.0017077158,0.009162528,0.0003597388],"about_ca_topic_score_codex":0.0000069057132,"about_ca_topic_score_gemma":0.000039856935,"teacher_disagreement_score":0.020542223,"about_ca_system_score_codex":0.000015863661,"about_ca_system_score_gemma":0.000014072951,"threshold_uncertainty_score":0.44188845},"labels":[],"label_agreement":null},{"id":"W2552764510","doi":"10.1016/j.molcel.2016.10.021","title":"An RB-EZH2 Complex Mediates Silencing of Repetitive DNA Sequences","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":167,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; University of British Columbia; Children’s Health Research Institute; Cancer Care Ontario; Western University","funders":"National Cancer Institute; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Gene silencing; Genetics; Computational biology; EZH2; DNA; DNA methylation; Cell biology; Histone; Gene; Gene expression","score_opus":0.008994051918990532,"score_gpt":0.23376170476687794,"score_spread":0.2247676528478874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2552764510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98693365,0.00024654774,0.008549003,0.00008048507,0.00009421357,0.0001446266,0.00003768443,0.000027120685,0.0038866883],"genre_scores_gemma":[0.9957288,0.00005800653,0.003613027,0.00018126248,0.00006660895,0.000013339384,0.000058867074,0.000030859082,0.00024924974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987655,0.00011855464,0.0002287321,0.0004310488,0.00020035387,0.00025579217],"domain_scores_gemma":[0.9990858,0.00001554274,0.0001325151,0.00053929456,0.00011922976,0.000107661515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019414797,0.00016714302,0.00017095437,0.000044906075,0.00003471308,0.000010017214,0.0002947377,0.0001295151,0.00010893399],"category_scores_gemma":[0.00006730824,0.0001295181,0.000107193766,0.0000708609,0.00012515382,0.0000060774046,0.00009479633,0.00003859595,0.00002048868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002125156,0.000052481293,0.00027004906,0.00001758627,0.000021456,0.000023269122,0.000047943366,0.000011201301,0.9978791,0.00022586265,0.000105290484,0.001324542],"study_design_scores_gemma":[0.0003499584,0.0004907597,0.00018505473,0.000025073206,0.000018303763,0.0000063007774,0.00012524382,0.00003247041,0.9968886,0.00041454923,0.0012680613,0.00019566885],"about_ca_topic_score_codex":0.000023903565,"about_ca_topic_score_gemma":0.000011455395,"teacher_disagreement_score":0.008795149,"about_ca_system_score_codex":0.0000148338995,"about_ca_system_score_gemma":0.00006757991,"threshold_uncertainty_score":0.5281595},"labels":[],"label_agreement":null},{"id":"W2558513990","doi":"10.1016/j.molcel.2016.10.033","title":"Acetylation of PCNA Sliding Surface by Eco1 Promotes Genome Stability through Homologous Recombination","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Ottawa; Université de Montréal; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Proliferating cell nuclear antigen; Biology; Homologous recombination; DNA repair; DNA clamp; DNA damage; Cell biology; Establishment of sister chromatid cohesion; DNA; Replication protein A; DNA polymerase; Molecular biology; DNA replication; Cohesin; Biochemistry; Chromatin; DNA-binding protein; Gene; Reverse transcriptase; RNA; Transcription factor","score_opus":0.009166830431272891,"score_gpt":0.214652169441807,"score_spread":0.20548533901053412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558513990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9289513,0.00057835557,0.06826047,0.00013669062,0.000110172405,0.00032690758,0.00003878292,0.000027172826,0.0015701134],"genre_scores_gemma":[0.9928672,0.000069440044,0.006363574,0.000043613323,0.00001797425,0.000011651354,0.00009843682,0.000034163902,0.0004939917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987154,0.0001572385,0.00026972545,0.00044718376,0.00016821282,0.0002422607],"domain_scores_gemma":[0.9991403,0.00001750966,0.00017162506,0.0004946893,0.00012765397,0.000048181235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003180104,0.0001681511,0.00016701913,0.000018316323,0.00004222008,0.000010450603,0.0001949395,0.00019340009,0.000059864447],"category_scores_gemma":[0.00009205881,0.00014451575,0.000107586566,0.000084386884,0.00004891278,0.0000108131635,0.00011735976,0.00005057594,0.00001528848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024422054,0.00012221362,0.00023371853,0.00003375861,0.000020815654,0.000002107397,0.000051243933,0.000013679927,0.9985609,0.00013547092,0.00010458185,0.00069707056],"study_design_scores_gemma":[0.00053989043,0.0003594093,0.00008492081,0.0000098005885,0.000016468355,0.0000028215497,0.000018781095,0.000030108136,0.99507475,0.001228355,0.002447353,0.00018733447],"about_ca_topic_score_codex":0.000014168751,"about_ca_topic_score_gemma":0.0000027362014,"teacher_disagreement_score":0.06391582,"about_ca_system_score_codex":0.000045566478,"about_ca_system_score_gemma":0.000044426175,"threshold_uncertainty_score":0.58931816},"labels":[],"label_agreement":null},{"id":"W2561257622","doi":"10.1016/j.molcel.2016.11.007","title":"Gene Architectures that Minimize Cost of Gene Expression","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Human Genome Research Institute; National Heart, Lung, and Blood Institute; Azrieli Foundation; National Institutes of Health; Laufer Center for Physical and Quantitative Biology, Stony Brook University; Minerva Foundation","keywords":"Biology; Gene; Gene expression; Genetics; Computational biology","score_opus":0.010121528526683295,"score_gpt":0.21530309236731582,"score_spread":0.20518156384063252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2561257622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8299227,0.001506784,0.1661147,0.00010194894,0.00010062402,0.0002656294,0.00003554874,0.0000117362115,0.0019403344],"genre_scores_gemma":[0.97901654,0.000106291205,0.019627139,0.00016468616,0.00006561048,0.000040627754,0.000020596057,0.000035959347,0.0009225717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989479,0.00011156495,0.00016983943,0.00034821883,0.0001849831,0.00023746668],"domain_scores_gemma":[0.9992016,0.000016559476,0.0001130184,0.00053859135,0.00003985833,0.00009035034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012552938,0.0001730573,0.00016444968,0.000041432206,0.000035018173,0.000007848015,0.00026163048,0.00016068747,0.00008653158],"category_scores_gemma":[0.000039975723,0.000118924116,0.00014840419,0.000036002984,0.00006099753,0.000001325457,0.00009779401,0.0000339659,0.000017285456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100399986,0.000042107993,0.00020450525,0.00001404045,0.000017167074,0.000012886753,0.000015492054,0.000014805729,0.98675877,0.000005081444,0.00020936706,0.012605365],"study_design_scores_gemma":[0.00057193113,0.00011808672,0.000088013425,0.000026303745,0.00001416325,0.000007606393,0.0000074710115,9.802266e-7,0.9920832,0.00018118991,0.0067204447,0.00018058777],"about_ca_topic_score_codex":0.0000035207559,"about_ca_topic_score_gemma":7.464807e-7,"teacher_disagreement_score":0.14909382,"about_ca_system_score_codex":0.0000059017166,"about_ca_system_score_gemma":0.00003215262,"threshold_uncertainty_score":0.48495847},"labels":[],"label_agreement":null},{"id":"W2567608080","doi":"10.1016/j.molcel.2016.11.033","title":"Misregulation of an Activity-Dependent Splicing Network as a Common Mechanism Underlying Autism Spectrum Disorders","year":2016,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":190,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"European Research Council; Canadian Institutes of Health Research","keywords":"RNA splicing; Biology; Autism; Alternative splicing; Transcriptome; Neuroscience; RNA-binding protein; Autism spectrum disorder; Genetics; Gene; Gene expression; Messenger RNA; RNA; Psychology; Psychiatry","score_opus":0.009709837936076984,"score_gpt":0.26236597712404314,"score_spread":0.25265613918796614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2567608080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9156155,0.00014545402,0.08190845,0.00049871794,0.00006579422,0.00024081478,0.0000037915597,0.000016821132,0.0015046635],"genre_scores_gemma":[0.9980668,0.00007656838,0.0006081802,0.00007882088,0.00004334503,0.000011471116,0.000019489908,0.000040929273,0.0010544125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856126,0.0001578225,0.00018355773,0.00039306012,0.00027226168,0.0004320405],"domain_scores_gemma":[0.9992148,0.000016502026,0.000114354036,0.000498885,0.0000144228525,0.00014102536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026976783,0.00017397257,0.00017508244,0.000057188554,0.000105532774,0.000023358545,0.0002242798,0.00014868053,0.000026105843],"category_scores_gemma":[0.00001472655,0.00014790276,0.00010894724,0.00009291753,0.00005062999,0.000011503501,0.00013403608,0.000090806265,0.000010705843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009504626,0.000071032766,0.00026099407,0.00001859339,0.000029810573,0.000012408357,0.000015092575,0.000512464,0.9873846,0.0026702916,0.000011446652,0.008918194],"study_design_scores_gemma":[0.00078825635,0.0005908067,0.0011784045,0.000036691556,0.000016141277,0.000006998671,0.000019869636,0.0009167311,0.982502,0.013488426,0.00024006273,0.00021564963],"about_ca_topic_score_codex":0.00029221326,"about_ca_topic_score_gemma":0.00030282798,"teacher_disagreement_score":0.08245129,"about_ca_system_score_codex":0.00003202066,"about_ca_system_score_gemma":0.00006170072,"threshold_uncertainty_score":0.6031299},"labels":[],"label_agreement":null},{"id":"W2569383255","doi":"10.1016/j.molcel.2016.11.002","title":"In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":291,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"Deutsche Forschungsgemeinschaft; Wellcome Trust; Wellcome","keywords":"Endoribonuclease; Biology; RNase P; RNA; Exosome complex; RNase MRP; Ribonuclease III; Cell biology; Non-coding RNA; RNase H; Degradosome; Biogenesis; RNase PH; Cleavage (geology); Molecular biology; Biochemistry; Gene; RNA interference","score_opus":0.00496909293613587,"score_gpt":0.1987791751624202,"score_spread":0.19381008222628432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2569383255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99710524,0.00062854623,0.00008802806,0.00026550112,0.0001114541,0.00016096156,0.000014449108,0.0000025521936,0.001623267],"genre_scores_gemma":[0.9991799,0.000414546,0.00019327605,0.00008308131,0.0000408445,0.0000070100964,0.0000058809323,0.000015855729,0.00005960864],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999156,0.00003423358,0.00019100156,0.00026826703,0.00006330793,0.000287211],"domain_scores_gemma":[0.99936074,0.0000053992167,0.00012083284,0.0004563462,0.00001692888,0.000039750226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015448082,0.0001326234,0.00015511985,0.00004725003,0.000074633215,0.000038475642,0.0003347008,0.00020961877,0.0000061390197],"category_scores_gemma":[0.000032417604,0.000112632675,0.000048326714,0.00003367756,0.00017983477,0.000004090899,0.0003094887,0.00011890321,0.000001108112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030928815,0.000039928345,0.002145059,0.000024587333,0.0000063431307,0.000033239136,0.000096426586,0.0000049001987,0.99646837,0.00014677185,0.000044050885,0.00095937646],"study_design_scores_gemma":[0.0005426006,0.00010520227,0.004162694,0.000023437864,0.000006609516,0.0000030847518,0.00015253591,0.00014599327,0.9917459,0.00018156103,0.002797187,0.00013321904],"about_ca_topic_score_codex":0.00016406005,"about_ca_topic_score_gemma":0.00013622404,"teacher_disagreement_score":0.0047225133,"about_ca_system_score_codex":0.000008646047,"about_ca_system_score_gemma":0.000024228266,"threshold_uncertainty_score":0.45930272},"labels":[],"label_agreement":null},{"id":"W2570114214","doi":"10.1016/j.molcel.2016.12.004","title":"A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":150,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; Princess Margaret Cancer Centre; University of Toronto; University Health Network; University of Regina; Lunenfeld-Tanenbaum Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canada Foundation for Innovation; Ontario Genomics Institute; U.S. Army; National Cancer Institute; University of Toronto; Canadian Cancer Society Research Institute; Ontario Genomics; Canada Research Chairs; Ontario Research Foundation; Cystic Fibrosis Canada; International Business Machines Corporation; Princess Margaret Cancer Foundation; Genome Canada","keywords":"Interactome; Protein tyrosine phosphatase; Biology; Receptor tyrosine kinase; Phosphatase; Cell biology; Proto-oncogene tyrosine-protein kinase Src; Signal transduction; Phosphorylation; Protein phosphatase 2; Receptor Protein-Tyrosine Kinases; Biochemistry; Gene","score_opus":0.006763962407670889,"score_gpt":0.2482097339682852,"score_spread":0.2414457715606143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2570114214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9807098,0.013471744,0.0020869134,0.00036118322,0.00021913071,0.00046602005,0.0012251822,0.000013637937,0.0014464159],"genre_scores_gemma":[0.99781734,0.000026369742,0.0010719242,0.00023360213,0.000037784896,0.000034876906,0.00039240587,0.0000209908,0.0003647055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987068,0.00007894324,0.00026694706,0.00043317417,0.00024305185,0.00027105975],"domain_scores_gemma":[0.99730664,0.0000041594735,0.00038057627,0.0021042882,0.000112392976,0.00009192161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015170364,0.00021929204,0.0002645035,0.00003187671,0.00018064656,0.00007815203,0.0011138036,0.00012446566,0.00008303727],"category_scores_gemma":[0.00024655485,0.00017697453,0.00039492865,0.00026271582,0.00022504457,0.000008049378,0.00068830955,0.000079119214,0.000015143617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012700971,0.0001872685,0.011346277,0.00003195451,0.00050909905,0.000015348569,0.000007498767,0.00013113288,0.9825957,0.0014689683,0.001989824,0.0015899177],"study_design_scores_gemma":[0.00046668173,0.00009664225,0.013421517,0.000024337574,0.00037993607,8.8557584e-7,0.0000050691883,0.000056629982,0.97449356,0.00006652626,0.010791193,0.00019702184],"about_ca_topic_score_codex":0.00030507054,"about_ca_topic_score_gemma":0.00007729614,"teacher_disagreement_score":0.017107567,"about_ca_system_score_codex":0.000025111982,"about_ca_system_score_gemma":0.00008058931,"threshold_uncertainty_score":0.7216812},"labels":[],"label_agreement":null},{"id":"W2570732803","doi":"10.1016/j.molcel.2016.11.003","title":"Arginine Methylation: The Coming of Age","year":2017,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1026,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Methylation; Methyltransferase; Epigenetics; Protein arginine methyltransferase 5; RNA splicing; Arginine; Alternative splicing; Regulator; DNA methylation; Cell biology; Translation (biology); Messenger RNA; Genetics; DNA; Gene expression; Gene; RNA; Amino acid","score_opus":0.04240636544437597,"score_gpt":0.3333107077680683,"score_spread":0.29090434232369233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2570732803","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007237468,0.99140996,0.0016673815,0.000024482602,0.0002563008,0.00052860164,0.000023601746,0.00000662323,0.006010696],"genre_scores_gemma":[0.0014070341,0.99483114,0.00026600025,0.000019482006,0.00025052897,0.000045051933,0.0006014618,0.00006808749,0.0025112312],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986541,0.00017861734,0.000422889,0.00037431138,0.00018458017,0.00018549696],"domain_scores_gemma":[0.9979555,0.000019390702,0.00067057466,0.0012444453,0.00006677008,0.00004329208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027616444,0.00029090155,0.0006445854,0.000060710256,0.00009766772,0.00003215599,0.00052765716,0.00041828907,0.000018633693],"category_scores_gemma":[0.000053184533,0.00022127233,0.00055496854,0.0000891002,0.00012382353,0.0000017284054,0.00019479248,0.00019957103,0.000015628575],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009552177,0.000031865544,7.7906844e-7,0.002855653,0.00030418887,0.000019345758,0.00002069317,0.00016203664,0.017451247,0.000059215407,0.0013703983,0.977715],"study_design_scores_gemma":[0.00016199588,0.000050105806,0.0000013992975,0.00061768363,0.0004521891,0.000010380448,0.0000021943915,0.000010140785,0.014522649,0.000019940968,0.9839313,0.00022002908],"about_ca_topic_score_codex":0.000011570681,"about_ca_topic_score_gemma":0.000006913951,"teacher_disagreement_score":0.9825609,"about_ca_system_score_codex":0.0000252822,"about_ca_system_score_gemma":0.00019372218,"threshold_uncertainty_score":0.9023224},"labels":[],"label_agreement":null},{"id":"W2572830166","doi":"10.1016/j.molcel.2016.12.007","title":"Coupling of Homologous Recombination and the Checkpoint by ATR","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":182,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Université Laval","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"Cyclin-dependent kinase; Homologous recombination; Biology; G2-M DNA damage checkpoint; CDK inhibitor; DNA damage; Cell biology; Phosphorylation; Mutant; DNA repair; DNA; Cell cycle; Cell cycle checkpoint; Genetics; Cell; Gene","score_opus":0.004551997638530882,"score_gpt":0.2145905688245928,"score_spread":0.21003857118606192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2572830166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99105376,0.0013110169,0.0037236991,0.0002932432,0.000087930355,0.00017524044,0.0000046799973,0.000005853649,0.003344574],"genre_scores_gemma":[0.99833965,0.00013832272,0.00049618265,0.00006950162,0.000014373594,0.000012068056,0.000020801921,0.000015203343,0.0008938938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994536,0.000021684667,0.00012596235,0.00020005001,0.000085423744,0.00011327109],"domain_scores_gemma":[0.9992182,0.0000064005503,0.00015929772,0.0005401789,0.00004621783,0.000029687133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029852285,0.00008801432,0.000108876804,0.000010774189,0.00011847004,0.000030881205,0.00023790578,0.00009092904,0.0000052795403],"category_scores_gemma":[0.000088229244,0.000069891146,0.000069399204,0.000011340292,0.0001705216,0.000002231145,0.00017789868,0.00005438667,0.000002504124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037503018,0.000024711358,0.00010753745,0.000013963813,0.00001724065,0.0000032463709,0.000019383293,0.000016889622,0.998646,0.00032775357,0.00027554636,0.0005102007],"study_design_scores_gemma":[0.0010971884,0.000100908415,0.0000963738,0.000005075593,0.000020669284,0.0000050271096,0.00001832202,0.00071182306,0.99585664,0.00068701844,0.0013169311,0.00008399635],"about_ca_topic_score_codex":0.000034304492,"about_ca_topic_score_gemma":0.0000030600036,"teacher_disagreement_score":0.00728589,"about_ca_system_score_codex":0.0000044183003,"about_ca_system_score_gemma":0.0000151670765,"threshold_uncertainty_score":0.28500783},"labels":[],"label_agreement":null},{"id":"W2584485311","doi":"10.1016/j.molcel.2017.01.011","title":"Multilayered Control of Alternative Splicing Regulatory Networks by Transcription Factors","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":201,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; Stem Cell Network","keywords":"Biology; RNA splicing; Alternative splicing; Transcription factor; Zinc finger; RNA-binding protein; Computational biology; SR protein; Cell biology; Genetics; Gene; RNA; Messenger RNA","score_opus":0.009447882491405053,"score_gpt":0.24785276719651092,"score_spread":0.23840488470510587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2584485311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9221166,0.0007942674,0.07600847,0.00003498468,0.00008341262,0.0002041487,0.000022578939,0.0000058304245,0.000729724],"genre_scores_gemma":[0.99873865,0.00007630656,0.00011049722,0.000068232795,0.000050666073,0.000008554945,0.00004729892,0.000027417966,0.0008723967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989694,0.00006992077,0.00018610769,0.00029891197,0.00018817758,0.00028749922],"domain_scores_gemma":[0.9990219,0.000007645522,0.00017169761,0.00060521264,0.00008080452,0.00011275268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001646439,0.00015398768,0.00018055347,0.000029576804,0.00015597648,0.000040889674,0.0003623997,0.0001355828,0.000009423591],"category_scores_gemma":[0.000046953584,0.00014636274,0.00014701922,0.000019112153,0.00011411384,0.0000070812684,0.000054347554,0.00011528845,0.000001649824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008639031,0.0000429575,0.0028914781,0.000015132828,0.000051725194,0.0000064330548,0.000024278088,0.0019442876,0.9938725,0.000013909893,0.00024547437,0.0008054341],"study_design_scores_gemma":[0.0012738636,0.0001725194,0.0022628577,0.000014841725,0.000017670058,7.008535e-7,0.00003125136,0.009641831,0.98550296,0.000008592091,0.00092206046,0.00015083603],"about_ca_topic_score_codex":0.00022540017,"about_ca_topic_score_gemma":0.000014247708,"teacher_disagreement_score":0.07662204,"about_ca_system_score_codex":0.000013424214,"about_ca_system_score_gemma":0.000024245706,"threshold_uncertainty_score":0.5968499},"labels":[],"label_agreement":null},{"id":"W2588127177","doi":"10.1016/j.molcel.2017.01.007","title":"Systematic Investigation of Transcription Factor Activity in the Context of Chromatin Using Massively Parallel Binding and Expression Assays","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Research Council; National Institutes of Health; Azrieli Foundation","keywords":"Biology; Chromatin; ChIA-PET; Nucleosome; Transcription factor; Gene expression; ChIP-sequencing; Genetics; Context (archaeology); Regulation of gene expression; Gene; Computational biology","score_opus":0.01800856871386259,"score_gpt":0.2358457911329377,"score_spread":0.2178372224190751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588127177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99453706,0.00019876997,0.0048081717,0.000021100395,0.00002734246,0.00030726517,0.000017234463,0.0000012343341,0.00008183289],"genre_scores_gemma":[0.9987434,0.000025341229,0.0011750493,0.000011484454,0.0000064370843,0.000008493463,0.00001339499,0.0000100842035,0.0000063198577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992859,0.00013905884,0.0002230747,0.00014832929,0.000111027795,0.00009261274],"domain_scores_gemma":[0.99919367,0.000012635211,0.00040613904,0.00033330917,0.00003251124,0.00002176307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022037578,0.00009896314,0.00018010696,0.000032341177,0.00007282897,0.000028083685,0.00018405874,0.00009712283,8.1024905e-7],"category_scores_gemma":[0.00004703205,0.00007866025,0.00005530208,0.000021574644,0.0000799155,0.000007610479,0.000045349152,0.00005289037,1.7396795e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011476117,0.000020654483,0.0015694787,0.0014708457,0.000010302514,0.0000015336753,0.00044752963,0.00007113758,0.996334,0.000022273898,0.0000012285742,0.00003954892],"study_design_scores_gemma":[0.00043026783,0.000066756824,0.0065330775,0.00042993654,0.000022472552,0.000002543563,0.00033183847,0.003616051,0.9884304,0.000051697643,0.0000010063516,0.00008396485],"about_ca_topic_score_codex":0.000054620596,"about_ca_topic_score_gemma":0.000019453664,"teacher_disagreement_score":0.007903604,"about_ca_system_score_codex":0.000011074549,"about_ca_system_score_gemma":0.000027634307,"threshold_uncertainty_score":0.32076716},"labels":[],"label_agreement":null},{"id":"W2591772585","doi":"10.1016/j.molcel.2017.01.031","title":"The SMX DNA Repair Tri-nuclease","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre","funders":"National Institute of General Medical Sciences; Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Louis-Jeantet Foundation; Wellcome Trust; Francis Crick Institute; Canada Research Chairs; European Research Council; National Institutes of Health; Cancer Research UK","keywords":"Biology; Nuclease; DNA; DNA repair; Genetics; Computational biology; Molecular biology; Cell biology","score_opus":0.006671147333934638,"score_gpt":0.22618832311600556,"score_spread":0.21951717578207092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591772585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9417429,0.0012022739,0.0012376119,0.0005060697,0.000448119,0.00030661377,0.000008929032,0.00007337061,0.05447412],"genre_scores_gemma":[0.9889419,0.000100660596,0.0010486869,0.0004894119,0.0001434898,0.000027393255,0.000019471156,0.00004962478,0.009179356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998817,0.00007543572,0.00016784637,0.00041332084,0.00018596518,0.00034039427],"domain_scores_gemma":[0.99766415,0.000007778743,0.00013994575,0.0020029212,0.00006210225,0.00012311703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002961458,0.0001773144,0.000111730245,0.000015061513,0.00061763264,0.00014439756,0.00072720216,0.00014534428,0.000019599483],"category_scores_gemma":[0.000197343,0.00014148996,0.0002679196,0.000022139784,0.00013509727,0.0000037090026,0.00038527694,0.000102064325,0.000116254814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049517465,0.00004313674,0.00011287175,0.000008932183,0.000037344333,0.00007647349,0.000009844432,0.0000053274807,0.9909098,0.0005357086,0.005967713,0.0022433428],"study_design_scores_gemma":[0.00038462883,0.00012218581,0.00017803359,0.0000037041796,0.000020792342,0.0000066078196,0.000017166749,0.000088044486,0.7252314,0.00027454845,0.27351433,0.00015852496],"about_ca_topic_score_codex":0.000016827866,"about_ca_topic_score_gemma":0.000014583128,"teacher_disagreement_score":0.26754662,"about_ca_system_score_codex":0.000011825287,"about_ca_system_score_gemma":0.00005834946,"threshold_uncertainty_score":0.5769793},"labels":[],"label_agreement":null},{"id":"W2594111041","doi":"10.1016/j.molcel.2017.01.032","title":"Mitochondrial Ca2+ Uniporter Is a Mitochondrial Luminal Redox Sensor that Augments MCU Channel Activity","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":231,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Center for Research Resources; National Institute of General Medical Sciences; Fondo Nacional de Desarrollo Científico y Tecnológico; National Institute on Drug Abuse; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; China Scholarship Council; Natural Sciences and Engineering Research Council of Canada; State of Delaware","keywords":"Uniporter; Biology; Redox; Mitochondrion; Cell biology; Biophysics; Biochemistry; Cytosol; Enzyme","score_opus":0.017920291480361027,"score_gpt":0.2548449659061815,"score_spread":0.23692467442582046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594111041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9389345,0.00022676605,0.020593308,0.00093396555,0.011407614,0.0010260268,0.00017558165,0.000060991988,0.026641259],"genre_scores_gemma":[0.965227,0.00009588138,0.0026927853,0.001615464,0.0035303421,0.00010700699,0.00024107272,0.00012251592,0.026367921],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973104,0.00020320671,0.00030325828,0.0011096327,0.00040057342,0.00067290396],"domain_scores_gemma":[0.99728465,0.000010939278,0.0003916313,0.0018781009,0.00013102657,0.00030366192],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011702506,0.00048221825,0.00040437642,0.00009352347,0.0005345169,0.00019218918,0.00068873295,0.0006102462,0.00025780493],"category_scores_gemma":[0.000114674396,0.0004931701,0.00041838453,0.000054648277,0.0002447377,0.000020838894,0.0003139393,0.0003260075,0.00023136326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007890969,0.0001733747,0.00047191538,0.000025464415,0.00008590356,0.00020785637,0.00008305728,0.000010014865,0.97300106,0.000011117,0.024637427,0.00050370226],"study_design_scores_gemma":[0.0027159173,0.00041047693,0.0004877666,0.000014981338,0.00008846672,0.00006139153,0.00002655673,0.000039577368,0.85459167,0.00005799021,0.14098845,0.0005167347],"about_ca_topic_score_codex":0.0001437068,"about_ca_topic_score_gemma":0.000060145372,"teacher_disagreement_score":0.11840938,"about_ca_system_score_codex":0.00003083579,"about_ca_system_score_gemma":0.000138568,"threshold_uncertainty_score":0.999752},"labels":[],"label_agreement":null},{"id":"W2595206365","doi":"10.1016/j.molcel.2017.02.019","title":"PARK2 Depletion Connects Energy and Oxidative Stress to PI3K/Akt Activation via PTEN S-Nitrosylation","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Ministry of Education, Israel; National Institutes of Health; Cancer Research UK; National Cancer Institute; National Institute of General Medical Sciences; Francis Crick Institute","keywords":"PTEN; S-Nitrosylation; Protein kinase B; PI3K/AKT/mTOR pathway; Biology; Cancer research; Cell biology; Nitric Oxide Synthase Type III; AMPK; Nitric oxide; Signal transduction; Enos; Phosphorylation; Protein kinase A; Biochemistry; Nitric oxide synthase; Endocrinology","score_opus":0.009482582371411355,"score_gpt":0.22092429000868624,"score_spread":0.21144170763727488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2595206365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90552855,0.00020098114,0.091447584,0.00045986028,0.00020847628,0.00024708762,0.000027253262,0.000043878314,0.001836361],"genre_scores_gemma":[0.99788576,0.000025008218,0.00036306173,0.0005805335,0.000030647072,0.00004196185,0.00026072317,0.000027322569,0.0007849486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887913,0.00017818324,0.00017726894,0.0004257112,0.00005471939,0.00028496925],"domain_scores_gemma":[0.9991601,0.00004281464,0.00019115767,0.00045141764,0.000105685554,0.00004882409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001088162,0.00021504764,0.00022005454,0.00011004507,0.00048472796,0.00007288536,0.00021197346,0.00018740304,0.00010969159],"category_scores_gemma":[0.0000604739,0.00020800256,0.000050075483,0.00005576261,0.00009055858,0.00020002278,0.00016152317,0.00012576819,0.00010910003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010380296,0.00006294576,0.00015393847,0.000010271735,0.00004847146,0.000013706527,0.00015510153,0.00001397757,0.9885632,0.0023443312,0.00018419688,0.008346094],"study_design_scores_gemma":[0.00089320523,0.00024712502,0.0014642866,0.000030283632,0.000033357155,0.0000049532973,0.000067737856,0.000024064637,0.9870304,0.0008648206,0.009097878,0.00024192428],"about_ca_topic_score_codex":0.00020276051,"about_ca_topic_score_gemma":0.00004626803,"teacher_disagreement_score":0.09235728,"about_ca_system_score_codex":0.000034834113,"about_ca_system_score_gemma":0.000019932844,"threshold_uncertainty_score":0.8482098},"labels":[],"label_agreement":null},{"id":"W2595517073","doi":"10.1016/j.molcel.2017.02.028","title":"Phagebook: The Social Network","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Quorum sensing; Bacteria; Social network (sociolinguistics); Genetics; World Wide Web; Social media; Computer science","score_opus":0.008904656024977168,"score_gpt":0.2396240624476774,"score_spread":0.23071940642270022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2595517073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.956691,0.0003668397,0.00036464422,0.00089003524,0.00044473077,0.00012816378,0.000004600561,0.0000103034245,0.04109965],"genre_scores_gemma":[0.99628335,0.000018495457,0.0003442282,0.0009009137,0.00092784537,0.000003831796,0.000024015795,0.000022728185,0.0014745615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992812,0.000047100715,0.00009833091,0.00022040594,0.000082158054,0.00027078475],"domain_scores_gemma":[0.9992613,0.000002484808,0.00010347265,0.0005637555,0.000030208628,0.000038767485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014248096,0.00011921547,0.00008836398,0.0000050823123,0.00087399024,0.00015401316,0.0003512858,0.00011676967,0.000016882583],"category_scores_gemma":[0.00001838941,0.0000910908,0.00011761546,0.000013361727,0.00013190808,0.0000021807612,0.00022812822,0.00008189471,0.000031908832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021724827,0.000010765527,0.00012263525,0.0000030597532,0.000017764885,0.000013328266,0.00002012404,0.0000074109485,0.99046606,0.00025490767,0.006274479,0.0027877165],"study_design_scores_gemma":[0.0003290407,0.000050755458,0.0018385808,0.0000034099496,0.000022029244,0.000004863437,0.000015685468,0.000012240016,0.72750866,0.000079385674,0.26996404,0.00017129992],"about_ca_topic_score_codex":0.000020189933,"about_ca_topic_score_gemma":0.000011476781,"teacher_disagreement_score":0.26368955,"about_ca_system_score_codex":0.0000037718803,"about_ca_system_score_gemma":0.000025988636,"threshold_uncertainty_score":0.67221147},"labels":[],"label_agreement":null},{"id":"W2596004793","doi":"10.1016/j.molcel.2017.02.008","title":"Structural and Molecular Mechanisms of Cytokine-Mediated Endocrine Resistance in Human Breast Cancer Cells","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":119,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute on Deafness and Other Communication Disorders; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institute on Alcohol Abuse and Alcoholism; National Institutes of Health","keywords":"Biology; Cytokine; Endocrine system; Coactivator; Cancer research; Tumor microenvironment; Phosphorylation; Immune system; Cell biology; Endocrinology; Immunology; Transcription factor; Hormone; Gene; Genetics","score_opus":0.006404039183853894,"score_gpt":0.23488759829394784,"score_spread":0.22848355911009394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2596004793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99591166,0.0009785031,0.0011906116,0.00013409583,0.00009583546,0.0002348787,0.00020022821,0.00001051938,0.0012436501],"genre_scores_gemma":[0.99824244,0.000052994237,0.001193734,0.0001504432,0.000032664262,0.000022322827,0.00007124402,0.000049263475,0.00018490704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985557,0.0000696236,0.00029447136,0.00051470805,0.00021295335,0.0003525232],"domain_scores_gemma":[0.9987313,0.0000055974633,0.00025643167,0.0008047493,0.000095894706,0.00010600516],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012459098,0.00025433325,0.00027313796,0.00006953814,0.00011578813,0.00004388815,0.00043611779,0.00014324754,0.000026924215],"category_scores_gemma":[0.00002545678,0.00026690218,0.00008928247,0.000056005076,0.00016430758,0.000007104407,0.00026168124,0.0001385439,0.0000017758904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056067613,0.00003496233,0.0006625368,0.00007803604,0.000026869346,0.0001601539,0.000025809746,0.000075051255,0.99820477,0.00056327926,0.00005455112,0.000057933186],"study_design_scores_gemma":[0.001200607,0.000071635404,0.0022211543,0.00004606889,0.00002441737,0.000007792089,0.000011790487,0.000042512424,0.9948053,0.0009564397,0.0003316234,0.00028065717],"about_ca_topic_score_codex":0.00024747333,"about_ca_topic_score_gemma":0.00022911835,"teacher_disagreement_score":0.0033994475,"about_ca_system_score_codex":0.000020659489,"about_ca_system_score_gemma":0.000057361445,"threshold_uncertainty_score":0.9999783},"labels":[],"label_agreement":null},{"id":"W2606492372","doi":"10.1016/j.molcel.2017.03.006","title":"Delayed Accumulation of H3K27me3 on Nascent DNA Is Essential for Recruitment of Transcription Factors at Early Stages of Stem Cell Differentiation","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research","keywords":"Biology; Transcription factor; Stem cell; Cell biology; Cellular differentiation; Transcription (linguistics); DNA; Genetics; Computational biology; Evolutionary biology; Gene","score_opus":0.038845081272587116,"score_gpt":0.28471912768604984,"score_spread":0.24587404641346272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606492372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883251,0.00011718364,0.010486185,0.00001393174,0.0001236026,0.0005764392,0.00023769465,0.0000024950957,0.00011737068],"genre_scores_gemma":[0.9989731,0.00007506071,0.00031577214,0.000008326033,0.000013760844,0.000016243806,0.0003521551,0.000024021077,0.00022161534],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990798,0.000034313936,0.00034089203,0.00024373847,0.00016691879,0.00013431533],"domain_scores_gemma":[0.9987957,0.000007162052,0.0005517363,0.00048839254,0.00012018086,0.000036855825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007988594,0.0001490919,0.00020113056,0.0000406461,0.00007093118,0.000013313319,0.00019409419,0.00014569491,0.0000073157044],"category_scores_gemma":[0.0000040333084,0.00014808585,0.00021555778,0.000016885579,0.000042675387,0.0000045007764,0.000054717406,0.000031708558,4.7653478e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020074855,0.00019449886,0.002935923,0.00019540118,0.000058946396,2.1146981e-7,0.00028374657,0.00045572544,0.995197,0.000043080516,0.000017349179,0.00041734657],"study_design_scores_gemma":[0.0010261924,0.00068324787,0.012108477,0.000018054347,0.00007753379,7.746075e-8,0.00004029131,0.0008056016,0.98496234,0.00003538046,0.000120691235,0.00012209256],"about_ca_topic_score_codex":0.000039424453,"about_ca_topic_score_gemma":0.00001541263,"teacher_disagreement_score":0.010647947,"about_ca_system_score_codex":0.000026359894,"about_ca_system_score_gemma":0.000024148881,"threshold_uncertainty_score":0.6038766},"labels":[],"label_agreement":null},{"id":"W2616140259","doi":"10.1016/j.molcel.2017.05.007","title":"Synthetic Genomics: Rewriting the Genome Chromosome by Chromosome","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Biology; Genomics; Genetics; Chromosome; Genome; Rewriting; Computational biology; Gene; Programming language","score_opus":0.00496972017538335,"score_gpt":0.24295880810386267,"score_spread":0.2379890879284793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2616140259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9645199,0.008316584,0.013106138,0.00060670753,0.00024119967,0.00036266292,0.0000473156,0.00002908939,0.01277037],"genre_scores_gemma":[0.9972014,0.0003256571,0.0005612206,0.0002951264,0.00024678907,0.00003575157,0.00006860984,0.000065612985,0.0011998686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987152,0.000038519367,0.00021533835,0.0004675298,0.00015068003,0.0004126903],"domain_scores_gemma":[0.99828506,0.0000081096505,0.00012119805,0.0014384475,0.000039562943,0.00010762301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021294254,0.0002341299,0.00016275169,0.000021188216,0.0004264422,0.00016836758,0.0008243622,0.0001394536,0.000039511408],"category_scores_gemma":[0.00006295873,0.00020598921,0.00015112224,0.00002764032,0.00013885395,0.0000042453294,0.00034207315,0.00015170344,0.00006099084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059495073,0.000024049063,0.000052185143,0.00002317732,0.000030506584,0.000020378722,0.00003745884,0.00032886345,0.99823165,0.000025977453,0.00048103338,0.0007387787],"study_design_scores_gemma":[0.000325963,0.00007827383,0.00023081673,0.000009591424,0.000029057093,0.000023857114,0.0000405901,0.000171224,0.8753642,0.000044566703,0.12339492,0.0002869416],"about_ca_topic_score_codex":0.000022831997,"about_ca_topic_score_gemma":0.000005545107,"teacher_disagreement_score":0.12291388,"about_ca_system_score_codex":0.000022104798,"about_ca_system_score_gemma":0.00004725329,"threshold_uncertainty_score":0.8399996},"labels":[],"label_agreement":null},{"id":"W2621164287","doi":"10.1016/j.molcel.2017.05.029","title":"DNA Replication Is Required for Circadian Clock Function by Regulating Rhythmic Nucleosome Composition","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Key Research and Development Program of China; U.S. Department of the Interior; Fonds de Recherche du Québec - Santé; National Institutes of Health; Cancer Prevention and Research Institute of Texas; Welch Foundation","keywords":"Biology; Circadian clock; DNA replication; Eukaryotic DNA replication; Control of chromosome duplication; Origin recognition complex; Circadian rhythm; Genetics; Cell biology; Pre-replication complex; Nucleosome; Licensing factor; DNA re-replication; Oscillating gene; Histone; Bacterial circadian rhythms; DNA; Gene; Neuroscience","score_opus":0.021574312308323983,"score_gpt":0.2564140812789906,"score_spread":0.23483976897066663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2621164287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9724385,0.0001944784,0.01553142,0.0015902795,0.0003878977,0.0008053452,0.00006447702,0.00011558114,0.008872006],"genre_scores_gemma":[0.99611956,0.000013973002,0.00035352784,0.0015556432,0.00012511958,0.00008332159,0.000050553645,0.000051284263,0.001647042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840426,0.000054723405,0.00025296686,0.0007376313,0.00020943729,0.00034098982],"domain_scores_gemma":[0.9981509,0.00003829295,0.00032415037,0.0013037527,0.000047335983,0.00013557261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017031001,0.00016824766,0.00015803218,0.000067181885,0.0007946889,0.00021688153,0.00024608427,0.00014082395,0.000034622266],"category_scores_gemma":[0.00013209146,0.0001995069,0.00013225399,0.00007628639,0.0000892782,0.0002974901,0.000050366245,0.000111593574,0.00013566724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003815387,0.000032021315,0.000061963496,0.000029557958,0.0000028670559,0.0000071721274,0.00010841605,0.000009972908,0.98827153,0.00503088,0.0019721852,0.004435272],"study_design_scores_gemma":[0.0007752867,0.00008531539,0.0010252058,0.00002583654,0.000025169906,0.000017547793,0.000008560664,0.0024580925,0.9568518,0.0009839397,0.037518233,0.00022503157],"about_ca_topic_score_codex":0.0000142338085,"about_ca_topic_score_gemma":6.628753e-7,"teacher_disagreement_score":0.035546046,"about_ca_system_score_codex":0.00007330068,"about_ca_system_score_gemma":0.000028670867,"threshold_uncertainty_score":0.8135655},"labels":[],"label_agreement":null},{"id":"W2622198941","doi":"10.1016/j.molcel.2017.05.020","title":"Autophagy-Dependent Shuttling of TBC1D5 Controls Plasma Membrane Translocation of GLUT1 and Glucose Uptake","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":155,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Cancer Institute; Samuel Waxman Cancer Research Foundation; Government of Canada; U.S. Department of Defense","keywords":"Retromer; Autophagy; Cell biology; GLUT1; Endosome; Biology; Glucose transporter; Sorting nexin; Intracellular; Biochemistry; Endocrinology","score_opus":0.010390191279845298,"score_gpt":0.25708079728689753,"score_spread":0.24669060600705223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2622198941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908538,0.0042602457,0.001373641,0.00014679943,0.00007817285,0.0003737884,0.0000173688,0.000019706935,0.002876502],"genre_scores_gemma":[0.998603,0.0004574162,0.0005567504,0.00010231464,0.000028418943,0.000010671984,0.000012857279,0.000024213872,0.0002043786],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902135,0.0000294465,0.00031678416,0.00021059977,0.00026538968,0.00015642444],"domain_scores_gemma":[0.99899346,0.000022873073,0.00023707151,0.0005506492,0.00008384811,0.00011208134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017138578,0.00013832306,0.00037195985,0.000061953695,0.000069770766,0.000015287182,0.00013999444,0.000096917385,0.00006635566],"category_scores_gemma":[0.00003842568,0.00012752821,0.00012362782,0.000029680317,0.0001225785,0.00005867864,0.000021870297,0.00009340719,0.000005262976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036224825,0.00022604031,0.0002592458,0.00023752793,0.000116691575,0.00010519985,0.00023989058,0.000050253017,0.9859333,0.00042625118,0.0000036113954,0.012039718],"study_design_scores_gemma":[0.0052752052,0.00021002702,0.005757156,0.0001065391,0.00019500557,0.000009495324,0.00004201367,0.0015398501,0.9863696,0.00019417648,0.00020426876,0.00009666884],"about_ca_topic_score_codex":0.00004643956,"about_ca_topic_score_gemma":0.0000029187092,"teacher_disagreement_score":0.01194305,"about_ca_system_score_codex":0.000012189166,"about_ca_system_score_gemma":0.00007263157,"threshold_uncertainty_score":0.520045},"labels":[],"label_agreement":null},{"id":"W2741865238","doi":"10.1016/j.molcel.2017.06.033","title":"Focal Adhesion- and IGF1R-Dependent Survival and Migratory Pathways Mediate Tumor Resistance to mTORC1/2 Inhibition","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer; Occupational Cancer Research Centre","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"mTORC1; PI3K/AKT/mTOR pathway; Biology; Protein kinase B; Cancer research; Cell biology; Integrin; Insulin-like growth factor 1 receptor; Focal adhesion; Signal transduction; Cell growth; Cell; Growth factor; Receptor; Biochemistry","score_opus":0.010690500472340055,"score_gpt":0.23212940339225008,"score_spread":0.22143890291991003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741865238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926162,0.0032475316,0.0013375273,0.0002190329,0.00025027228,0.0002308317,0.0000570009,0.00001706252,0.0020245789],"genre_scores_gemma":[0.9981089,0.00013685656,0.00063107774,0.00046132834,0.00018609379,0.00003790127,0.000028962662,0.00004306046,0.0003657913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985738,0.000081240345,0.00019463807,0.00059962977,0.00025092228,0.00029980612],"domain_scores_gemma":[0.9989031,0.000012765992,0.00013089243,0.00063891,0.000080817415,0.00023351081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002868826,0.00022291762,0.00018840526,0.00003960577,0.00023783692,0.00010977367,0.00020321818,0.00014221063,0.000007875512],"category_scores_gemma":[0.00012354556,0.00023335178,0.000057690922,0.000027187789,0.00013746314,0.000008376229,0.00029342674,0.000117221694,0.000009972383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010434544,0.000026625517,0.001224646,0.00004859104,0.00001550612,0.00011641305,0.00004778261,0.000010442173,0.99678135,0.000064382606,0.0012140676,0.0003458509],"study_design_scores_gemma":[0.0007810888,0.00021606786,0.0019320922,0.000050318118,0.00002399901,0.000008576112,0.00004315955,0.00001346328,0.9822719,0.00019615403,0.014132858,0.00033029477],"about_ca_topic_score_codex":0.000030067009,"about_ca_topic_score_gemma":0.00018850378,"teacher_disagreement_score":0.014509419,"about_ca_system_score_codex":0.00002716941,"about_ca_system_score_gemma":0.00007760868,"threshold_uncertainty_score":0.95158094},"labels":[],"label_agreement":null},{"id":"W2756264987","doi":"10.1016/j.molcel.2017.08.013","title":"mTOR Controls Mitochondrial Dynamics and Cell Survival via MTFP1","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":396,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal Neurological Institute and Hospital; McGill University","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Vetenskapsrådet; Howard Hughes Medical Institute; Cancerfonden; Canadian Diabetes Association; Medical Research Council; Terry Fox Research Institute","keywords":"Mitochondrial fission; Biology; mTORC1; Cell biology; PI3K/AKT/mTOR pathway; mitochondrial fusion; RPTOR; Mitochondrion; GTPase; Mitochondrial biogenesis; mTORC2; Signal transduction; Mitochondrial DNA; Biochemistry","score_opus":0.006634367875222086,"score_gpt":0.22411907619432822,"score_spread":0.21748470831910613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2756264987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7461816,0.0010150858,0.1904854,0.0004476764,0.004795687,0.00066876115,0.000096866446,0.000039705123,0.056269232],"genre_scores_gemma":[0.98635924,0.00010379248,0.0035883703,0.0005403802,0.0007590433,0.000029360826,0.00023076095,0.000057757974,0.008331267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986801,0.0001079977,0.00020894026,0.0005350691,0.00014218812,0.00032567285],"domain_scores_gemma":[0.99870056,0.00001126495,0.00016810873,0.0008738997,0.000075429285,0.00017075003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111911744,0.00023697554,0.00024080828,0.000034738,0.00027589346,0.00011465197,0.00032911528,0.00031259103,0.000072537645],"category_scores_gemma":[0.00008060189,0.00024081796,0.0001236519,0.000018196073,0.00015533529,0.000005822089,0.00021939147,0.0001509038,0.000069528985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019058051,0.00005891079,0.0008833906,0.000017899845,0.000020267717,0.00004906423,0.000014012278,0.0000130132785,0.9964751,0.0001656718,0.0010416065,0.0010705052],"study_design_scores_gemma":[0.004871073,0.00063736795,0.00062369194,0.0000061063697,0.000071260925,0.000032984964,0.000042514195,0.0007205875,0.85662204,0.00016523321,0.13559915,0.0006079982],"about_ca_topic_score_codex":0.000044397297,"about_ca_topic_score_gemma":0.000085678126,"teacher_disagreement_score":0.24017768,"about_ca_system_score_codex":0.000012477297,"about_ca_system_score_gemma":0.000050504637,"threshold_uncertainty_score":0.9820271},"labels":[],"label_agreement":null},{"id":"W2760870410","doi":"10.1016/j.molcel.2017.09.002","title":"The Anti-CRISPR Story: A Battle for Survival","year":2017,"lang":"en","type":"review","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"CRISPR; Biology; Genome editing; Arms race; Cas9; Computational biology; Genome; Battle; Gene; Genetics","score_opus":0.0348125794065268,"score_gpt":0.37391671817545175,"score_spread":0.3391041387689249,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760870410","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000009477857,0.97617847,0.020336194,0.000031585067,0.0014117103,0.0005999045,0.000068023386,0.000013050219,0.0013515591],"genre_scores_gemma":[0.00016301812,0.99568117,0.0003983145,0.0000128493375,0.0004308917,0.00018470021,0.00029929745,0.00012102682,0.0027087587],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99861383,0.00009433395,0.00025205262,0.000494188,0.00013696284,0.00040864528],"domain_scores_gemma":[0.9983559,0.000086343265,0.00018874352,0.0012167741,0.00006060339,0.00009163682],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003748636,0.0003860937,0.00061943865,0.000034572306,0.00031935165,0.00010897485,0.00074931444,0.00034138956,0.0000031420252],"category_scores_gemma":[0.00022591915,0.0002908173,0.00071464473,0.000034639314,0.00007547762,0.0000010701267,0.00020106041,0.00021103345,0.000024147415],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009855768,0.000043603304,0.0000011651791,0.0051469654,0.0003409156,0.000020292806,0.000008913206,0.00003954133,0.0044794255,0.0001043177,0.013691346,0.9761137],"study_design_scores_gemma":[0.0001908989,0.00007233904,5.700752e-7,0.0002358463,0.00026778525,0.000006477771,0.0000051561833,0.000008099401,0.004205569,0.0000061232713,0.9946403,0.00036085906],"about_ca_topic_score_codex":0.0000028715774,"about_ca_topic_score_gemma":0.0000071106015,"teacher_disagreement_score":0.9809489,"about_ca_system_score_codex":0.000016442382,"about_ca_system_score_gemma":0.00022267202,"threshold_uncertainty_score":0.9999544},"labels":[],"label_agreement":null},{"id":"W2765972697","doi":"10.1016/j.molcel.2017.10.005","title":"Spt6 Gets in the Way of Polycomb to Promote ESC Pluripotency","year":2017,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Biology; Polycomb-group proteins; Cell biology; Computational biology; Genetics; Transcription factor; Repressor; Gene","score_opus":0.00979484271231455,"score_gpt":0.24228310633528483,"score_spread":0.2324882636229703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765972697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75517225,0.01776429,0.0047052014,0.16628835,0.0009758366,0.002724074,0.00016629689,0.000018360513,0.052185345],"genre_scores_gemma":[0.8653119,0.00062942854,0.0029661567,0.12058315,0.0017953304,0.0001376394,0.0013261512,0.0001995706,0.007050659],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982343,0.00017189012,0.00034414508,0.00053259486,0.0003463269,0.00037078647],"domain_scores_gemma":[0.99819005,0.000010616037,0.0002513228,0.0014147622,0.00008703077,0.00004621885],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034983244,0.00030485654,0.000290796,0.00010721756,0.00006276674,0.00004939851,0.00089513086,0.0006735201,0.000012786878],"category_scores_gemma":[0.00008415069,0.00024951375,0.0002114406,0.000058254765,0.000062609986,0.0000017868642,0.00019627067,0.00049550575,0.00002197948],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018623154,0.00007314876,0.00009469306,0.00015362287,0.000035403362,0.00042646725,0.00017180966,0.000053593216,0.9415099,0.000004621594,0.053977564,0.003480528],"study_design_scores_gemma":[0.00017550954,0.00018459799,0.00015749322,0.000027827995,0.00002322194,0.0000018171604,0.0000036559295,0.0000049431587,0.4530951,0.00017138387,0.54595125,0.00020320287],"about_ca_topic_score_codex":0.00011833453,"about_ca_topic_score_gemma":0.000027667193,"teacher_disagreement_score":0.4919737,"about_ca_system_score_codex":0.0000134772645,"about_ca_system_score_gemma":0.00007920917,"threshold_uncertainty_score":0.9999957},"labels":[],"label_agreement":null},{"id":"W2766355785","doi":"10.1016/j.molcel.2017.09.027","title":"A General Strategy for Discovery of Inhibitors and Activators of RING and U-box E3 Ligases with Ubiquitin Variants","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"H2020 European Research Council; European Commission; Cancer Research UK; Mitacs; Genome Canada; Québec Consortium for Drug Discovery; Diamond Light Source","keywords":"Biology; Ubiquitin; Ubiquitin-Protein Ligases; Ubiquitin ligase; Computational biology; Drug discovery; Bioinformatics; Genetics; Cell biology; Gene","score_opus":0.012430100675038715,"score_gpt":0.24255352132354355,"score_spread":0.23012342064850483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766355785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956375,0.00059102697,0.0020456195,0.00001865579,0.000022780761,0.00025154065,0.0000697306,0.0000027433368,0.0013604353],"genre_scores_gemma":[0.9980755,0.00007157955,0.0015538256,0.000022619837,0.000049892762,0.000018961702,0.000019460933,0.000021834861,0.00016633204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993324,0.000024367147,0.00014800673,0.0002574732,0.00007860975,0.00015913107],"domain_scores_gemma":[0.99939555,0.000008907177,0.00019490355,0.00029936587,0.000046470454,0.000054801403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001019404,0.00013482476,0.00017629578,0.000027115715,0.00008384954,0.000045388286,0.00011301779,0.000091748356,0.0000012903805],"category_scores_gemma":[0.00003591695,0.000117315605,0.000047346097,0.0000155508,0.00016001235,0.000012028854,0.00012013907,0.00004287515,6.872102e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001533103,0.000040265233,0.0021095288,0.00017173651,0.00003831469,0.0000055626483,0.0000366392,0.000016428789,0.9957936,0.00028269246,0.000012314529,0.0013396065],"study_design_scores_gemma":[0.00089223555,0.0006514358,0.0018376856,0.00005081711,0.000030664956,0.0000065460645,0.000052776755,0.000037053596,0.99597347,0.0001259973,0.00019870677,0.00014259263],"about_ca_topic_score_codex":0.000057287714,"about_ca_topic_score_gemma":0.000010393823,"teacher_disagreement_score":0.0024380255,"about_ca_system_score_codex":0.0000025417528,"about_ca_system_score_gemma":0.000052952557,"threshold_uncertainty_score":0.47839916},"labels":[],"label_agreement":null},{"id":"W2773025088","doi":"10.1016/j.molcel.2017.11.018","title":"SnapShot: Lysine Methylation beyond Histones","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Western University","funders":"","keywords":"Biology; Histone; Histone methyltransferase; Lysine; Histone code; Methylation; Chromatin; Snapshot (computer storage); EZH2; Histone methylation; Genetics; Cell biology; Computational biology; DNA methylation; Nucleosome; DNA; Gene expression; Amino acid; Gene","score_opus":0.0065184193532334045,"score_gpt":0.24460694869515162,"score_spread":0.2380885293419182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773025088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9492662,0.0037257054,0.008798054,0.0009154601,0.0004402465,0.00022220907,0.000008753064,0.000017995808,0.03660537],"genre_scores_gemma":[0.99532956,0.00007609015,0.0009100726,0.00012846735,0.00019392207,0.00001363415,0.0003188448,0.00003289445,0.0029964894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911976,0.00003623626,0.00015978322,0.00034762706,0.00015016933,0.00018642402],"domain_scores_gemma":[0.99880254,0.000002807085,0.00017765425,0.0008696528,0.00008050722,0.00006683013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011378846,0.00014989066,0.000117989955,0.000041566705,0.00022443327,0.000057195823,0.0002509968,0.00017419082,0.000084869986],"category_scores_gemma":[0.000048343743,0.00016343954,0.00011733544,0.000033926106,0.00008444257,0.000006607665,0.000114572314,0.00006887233,0.000031035237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030471067,0.000026316513,0.00036104638,0.000010196996,0.000028449493,0.000005424199,0.000018303082,0.0007090325,0.99046504,0.00004799069,0.002688997,0.005608716],"study_design_scores_gemma":[0.0004805268,0.00007433916,0.0021562565,0.0000043020086,0.000040859253,0.000004306458,0.0000044010576,0.000295257,0.88549805,0.00016534256,0.11108104,0.00019534094],"about_ca_topic_score_codex":0.00020722955,"about_ca_topic_score_gemma":0.0001583274,"teacher_disagreement_score":0.108392045,"about_ca_system_score_codex":0.00003960434,"about_ca_system_score_gemma":0.00008025734,"threshold_uncertainty_score":0.6664871},"labels":[],"label_agreement":null},{"id":"W2775215876","doi":"10.1016/j.molcel.2017.11.007","title":"A Unique ISR Program Determines Cellular Responses to Chronic Stress","year":2017,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":208,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Uppsala Multidisciplinary Center for Advanced Computational Science; Wellcome; American Diabetes Association; Canadian Institutes of Health Research; Vetenskapsrådet; Science for Life Laboratory; Canadian Cancer Society Research Institute; National Institutes of Health; Knut och Alice Wallenbergs Stiftelse; Cancerfonden; Grantová Agentura České Republiky; Swedish Foundation for International Cooperation in Research and Higher Education; Wellcome Trust","keywords":"Biology; Computational biology; Chronic stress; Genetics; Cell biology; Neuroscience","score_opus":0.007561886778909208,"score_gpt":0.2754317055557109,"score_spread":0.26786981877680166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2775215876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98866224,0.0011630027,0.0015791247,0.0002460642,0.00014474554,0.0005803314,0.00006152291,0.000038496626,0.0075244764],"genre_scores_gemma":[0.99540895,0.00007118104,0.0013592952,0.00023493273,0.00017215226,0.00018892785,0.000094927454,0.000050803774,0.002418801],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853843,0.00008135895,0.00019715186,0.00055631046,0.0001984988,0.00042823007],"domain_scores_gemma":[0.9980713,0.0000069867656,0.000121688994,0.0014035301,0.00008931349,0.00030715563],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009727408,0.00026123066,0.00018008731,0.000050352402,0.0002516149,0.00021879892,0.0007003322,0.00015140085,0.000026513018],"category_scores_gemma":[0.00014594034,0.00025193594,0.00017581563,0.000038466642,0.00012210988,0.0000058709707,0.0003996844,0.00008827975,0.000046018748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001401595,0.0001857083,0.0051428056,0.00008203594,0.000027663378,0.00032562195,0.000020053105,0.00007757384,0.9864105,0.000041266194,0.00074289413,0.0068037445],"study_design_scores_gemma":[0.0006057443,0.00054413517,0.0016020178,0.000038087743,0.00003405806,0.0000050906187,0.0000138700525,0.00009160029,0.93871665,0.000025485007,0.057987876,0.0003353638],"about_ca_topic_score_codex":0.00005234611,"about_ca_topic_score_gemma":0.00006185461,"teacher_disagreement_score":0.057244983,"about_ca_system_score_codex":0.000020514479,"about_ca_system_score_gemma":0.00014852583,"threshold_uncertainty_score":0.99999326},"labels":[],"label_agreement":null},{"id":"W2783088162","doi":"10.1016/j.molcel.2017.12.026","title":"A Regulatory Module Controlling Homeostasis of a Plant Immune Kinase","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":279,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; Queen's University; Chinese Academy of Sciences; Universities Space Research Association","keywords":"Biology; Immune system; Homeostasis; Cell biology; Kinase; Protein-Serine-Threonine Kinases; Computational biology; Protein kinase A; Immunology","score_opus":0.00977245754757681,"score_gpt":0.19282359215991773,"score_spread":0.18305113461234093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783088162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969704,0.00063298346,0.00006563697,0.000095279596,0.0000945914,0.00009513221,0.00014486018,0.000021175118,0.001879918],"genre_scores_gemma":[0.99942183,0.00002151744,0.00018755805,0.00009920616,0.000043097967,0.000003901417,0.00006915187,9.1228577e-7,0.00015282103],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993628,0.00005755561,0.00018128505,0.00013696868,0.000094590825,0.00016675917],"domain_scores_gemma":[0.9996615,0.00004118276,0.00009379932,0.00008878246,0.00007268723,0.000042056774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011809331,0.00008972939,0.0001501298,0.000014323597,0.000109204186,0.000020019723,0.00016748882,0.000053721695,0.0002709003],"category_scores_gemma":[0.0000151942395,0.00003838308,0.00010334191,0.00012882131,0.00006664989,0.00004552173,0.000052008614,0.000081076345,0.000045509485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004772382,0.00009190348,0.000070070244,0.0000041312665,0.0000117600675,0.0000074815393,0.00002886817,0.000004060292,0.9938205,0.000053632888,0.0002049571,0.0056549134],"study_design_scores_gemma":[0.00019159827,0.00023767503,0.0064575775,0.000025908874,0.0000136944645,0.000007940693,0.00009517,0.00017691715,0.9721866,0.00008543434,0.020410106,0.00011132942],"about_ca_topic_score_codex":0.00050308264,"about_ca_topic_score_gemma":0.00007250197,"teacher_disagreement_score":0.02163385,"about_ca_system_score_codex":0.00001224262,"about_ca_system_score_gemma":0.0000056863823,"threshold_uncertainty_score":0.2966168},"labels":[],"label_agreement":null},{"id":"W2783306773","doi":"10.1016/j.molcel.2017.12.028","title":"Interactome Screening Identifies the ER Luminal Chaperone Hsp47 as a Regulator of the Unfolded Protein Response Transducer IRE1α","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":165,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Office of Naval Research Global; Air Force Office of Scientific Research; Fondo Nacional de Desarrollo Científico y Tecnológico; Comisión Nacional de Investigación Científica y Tecnológica; Fondo de Fomento al Desarrollo Científico y Tecnológico; Canadian Institutes of Health Research; Institut National de la Santé et de la Recherche Médicale; Consejo Nacional de Innovación, Ciencia y Tecnología; Société Francophone du Diabète; Cancer Research UK; Instituto Millenium; Ligue Contre le Cancer; Agence Nationale de la Recherche; Deutsche Forschungsgemeinschaft; Muscular Dystrophy Association; Michael J. Fox Foundation for Parkinson's Research","keywords":"Biology; Interactome; Regulator; Unfolded protein response; Cell biology; Chaperone (clinical); Computational biology; Genetics; Endoplasmic reticulum; Pathology; Gene","score_opus":0.010277257488462324,"score_gpt":0.2700249305262367,"score_spread":0.2597476730377744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783306773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99405074,0.0003891359,0.0017429712,0.0014509328,0.00009137486,0.0009498727,0.000010857669,0.00001142439,0.001302717],"genre_scores_gemma":[0.9930959,0.000004967204,0.00036453933,0.00027201296,0.000144831,0.00010791611,0.000008981203,0.00004934197,0.0059515303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99763894,0.0006754318,0.00031572822,0.00043503934,0.0005132333,0.00042165478],"domain_scores_gemma":[0.998427,0.000024173767,0.000101184465,0.0011178504,0.00023419922,0.000095630814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086934754,0.00021444604,0.00017534175,0.00006781417,0.00021186424,0.000054143304,0.0007834265,0.00017533728,0.00015365925],"category_scores_gemma":[0.0003277961,0.00014040955,0.00021949569,0.00027779935,0.0005707941,0.000007843651,0.00037495725,0.00024439057,0.00004791055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010521217,0.000060497237,0.00004511372,0.000032073953,0.00005195877,0.000012990336,0.00036042754,0.0000050438216,0.9970276,0.000023141165,0.00027191354,0.0010571308],"study_design_scores_gemma":[0.000524642,0.00045771612,0.0009798796,0.00006226677,0.00001973591,0.000018069455,0.00015833584,0.00005998194,0.97807336,0.00006836881,0.019410865,0.00016680015],"about_ca_topic_score_codex":0.00008605409,"about_ca_topic_score_gemma":0.000029459601,"teacher_disagreement_score":0.01913895,"about_ca_system_score_codex":0.00002105432,"about_ca_system_score_gemma":0.0002012023,"threshold_uncertainty_score":0.5725735},"labels":[],"label_agreement":null},{"id":"W2784370070","doi":"10.1016/j.molcel.2017.12.020","title":"High-Density Proximity Mapping Reveals the Subcellular Organization of mRNA-Associated Granules and Bodies","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":820,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Jewish General Hospital; McGill University; SickKids Foundation; University of Toronto; Sinai Health System; Montreal Clinical Research Institute; Lunenfeld-Tanenbaum Research Institute","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Government of Ontario; Canada Research Chairs; Canada Foundation for Innovation; Canadian Institutes of Health Research","keywords":"Biology; Messenger RNA; Translation (biology); Cell biology; Stress granule; Core protein; RNA-binding protein; RNA; P-bodies; Rna processing; Ribonucleoprotein; Precursor mRNA; RNA splicing; Molecular biology; Genetics; Gene","score_opus":0.007705005522753465,"score_gpt":0.2118725875610718,"score_spread":0.20416758203831833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784370070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959168,0.0004073007,0.0030281756,0.00017288185,0.000035563546,0.00019781145,0.000006286909,0.000009725901,0.00022548062],"genre_scores_gemma":[0.9986272,0.000085611464,0.00039305963,0.00013661537,0.000051762938,0.0000031462187,0.00004415967,0.000018520568,0.0006399146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990891,0.00013762737,0.0001637141,0.00023287354,0.00016532536,0.00021134257],"domain_scores_gemma":[0.9992589,0.000011102339,0.0000992745,0.00028574007,0.00029122326,0.000053769738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034258454,0.000110920846,0.00013619126,0.000031097272,0.00016605758,0.000025898775,0.00015350016,0.00010128753,0.000008643437],"category_scores_gemma":[0.0002440067,0.000086750035,0.000040858697,0.00012628613,0.0001970067,0.000003000503,0.00016070536,0.000073867224,0.0000045134652],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001174826,0.00003097328,0.011942136,0.000026569733,0.0000334649,0.000004685711,0.00008467788,0.000003074683,0.9872978,0.00007224199,0.00030273644,0.0001899078],"study_design_scores_gemma":[0.00031015996,0.00012903541,0.014592904,0.000013763083,0.000016491975,0.0000026011198,0.000064482876,0.000057309637,0.9842419,0.00021086876,0.0002587217,0.00010176068],"about_ca_topic_score_codex":0.00011902246,"about_ca_topic_score_gemma":0.00003795794,"teacher_disagreement_score":0.0030558822,"about_ca_system_score_codex":0.000009433274,"about_ca_system_score_gemma":0.000031254014,"threshold_uncertainty_score":0.35375637},"labels":[],"label_agreement":null},{"id":"W2785845366","doi":"10.1016/j.molcel.2018.01.030","title":"Cdc48/VCP Promotes Chromosome Morphogenesis by Releasing Condensin from Self-Entrapment in Chromatin","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Condensin; Chromatin; Biology; Chromatin remodeling; Cell biology; Mitosis; Prophase; Chromosome segregation; DNA; Chromosome; Genetics; Cohesin; Gene; Meiosis","score_opus":0.003027425180648428,"score_gpt":0.18929192714728282,"score_spread":0.18626450196663438,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2785845366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945106,0.0019037916,0.0016112375,0.000101393125,0.00014772933,0.00033932726,0.00009687629,0.000034055203,0.0012550274],"genre_scores_gemma":[0.9906225,0.00017097573,0.007778546,0.00040031355,0.00013105468,0.000023888244,0.00059841323,0.000075124335,0.00019918935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981705,0.00010603538,0.00038725295,0.0006572687,0.00021177213,0.00046717527],"domain_scores_gemma":[0.9990458,0.000009933502,0.00014906413,0.0005874467,0.00007536196,0.00013241678],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001119916,0.0003132036,0.00025644238,0.000057527548,0.00008961018,0.000064603235,0.00031620337,0.00025360374,0.00008472901],"category_scores_gemma":[0.000017428192,0.0003451765,0.00011399314,0.00014275359,0.000096738295,0.0000047814287,0.00018273485,0.000112010945,0.000075538264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020849524,0.00021807587,0.00060117885,0.000023285878,0.00005124081,0.000035569043,0.00012595403,0.00002493186,0.9973636,0.000008784928,0.0010270171,0.0004994672],"study_design_scores_gemma":[0.00094807724,0.0002704203,0.0007350945,0.00002764925,0.000033169923,0.000009469042,0.00007314301,0.001718831,0.98806703,0.00011566438,0.007580092,0.00042133138],"about_ca_topic_score_codex":0.00015715325,"about_ca_topic_score_gemma":0.000059758113,"teacher_disagreement_score":0.009296587,"about_ca_system_score_codex":0.00007494231,"about_ca_system_score_gemma":0.000099296085,"threshold_uncertainty_score":0.99990004},"labels":[],"label_agreement":null},{"id":"W2785977970","doi":"10.1016/j.molcel.2018.01.006","title":"Transcriptional Pause Sites Delineate Stable Nucleosome-Associated Premature Polyadenylation Suppressed by U1 snRNP","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":128,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; Natural Sciences and Engineering Research Council of Canada; U.S. Public Health Service; Uehara Memorial Foundation","keywords":"Biology; Polyadenylation; Nucleosome; snRNP; Genetics; Histone; Cell biology; Ribonucleoprotein; DNA; RNA; Gene","score_opus":0.007543768243081384,"score_gpt":0.2342873998950574,"score_spread":0.226743631651976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2785977970","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902579,0.0015131881,0.005883868,0.00031397655,0.00006416286,0.000233939,0.00013430526,0.000030949548,0.001567693],"genre_scores_gemma":[0.98973244,0.00007691502,0.0005920728,0.00062771497,0.00012333276,0.0000159797,0.0014738475,0.00004565215,0.0073120543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849147,0.00011415515,0.00021035908,0.0004134127,0.00031434215,0.00045627373],"domain_scores_gemma":[0.99922025,0.000008324209,0.000067480054,0.00032441624,0.00022017064,0.00015936114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017490551,0.00019563861,0.00014688187,0.00005000984,0.00015700098,0.00007979975,0.00022709172,0.00024807782,0.000168145],"category_scores_gemma":[0.00007293508,0.0001942835,0.000108839864,0.00014693606,0.00008206532,0.000010984896,0.000059951843,0.00015121812,0.000053434836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010780859,0.00011816138,0.0005640162,0.000017411883,0.00005163854,0.000008709698,0.000033874374,0.000032913533,0.97961396,0.000016690172,0.01932882,0.0001059696],"study_design_scores_gemma":[0.00088645285,0.00031765216,0.00041415254,0.000011862041,0.000021627779,0.0000024745516,0.000022484923,0.0011151178,0.97127765,0.00004056041,0.025661012,0.00022897703],"about_ca_topic_score_codex":0.00005678918,"about_ca_topic_score_gemma":0.000050731458,"teacher_disagreement_score":0.0083363615,"about_ca_system_score_codex":0.000023685565,"about_ca_system_score_gemma":0.0000620995,"threshold_uncertainty_score":0.7922651},"labels":[],"label_agreement":null},{"id":"W2788004032","doi":"10.1016/j.molcel.2018.01.027","title":"Ubiquitin-Mediated Regulation of RIPK1 Kinase Activity Independent of IKK and MK2","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":141,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; Niilo Helanderin Säätiö; European Research Council; Medical Research Council; Medical Research Council Canada; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Lister Institute of Preventive Medicine; National Institute for Health and Care Research; Breast Cancer Now","keywords":"Biology; Ubiquitin; IκB kinase; Cell biology; Kinase; RIPK1; Posttranslational modification; Ubiquitin ligase; Signal transduction; Genetics; Biochemistry; Enzyme; NF-κB; Apoptosis; Gene; Programmed cell death","score_opus":0.0069998340086347074,"score_gpt":0.21742685050062874,"score_spread":0.21042701649199402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788004032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923403,0.0002700075,0.00522976,0.000020764788,0.000059286005,0.00014637556,0.000026286081,0.000007637995,0.0018995493],"genre_scores_gemma":[0.9988987,0.000014590223,0.00079085486,0.00004965931,0.00005029341,0.000004410827,0.00005607413,0.000020938405,0.00011447109],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999124,0.00008235277,0.00018652488,0.00027659413,0.00017635884,0.00015419562],"domain_scores_gemma":[0.99924904,0.000010569897,0.00017622046,0.00034669624,0.00015517695,0.00006230468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001935114,0.00012423945,0.00015459575,0.000052141757,0.000027460757,0.0000059106533,0.00010935953,0.00016135801,0.000025318584],"category_scores_gemma":[0.00006414848,0.00013080548,0.000062242325,0.00008602629,0.00016832672,0.000002996174,0.0001173004,0.00005946663,0.000004527247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089559035,0.00008711511,0.0007026647,0.000052419255,0.000022192242,0.000004007243,0.00005496644,0.000016425498,0.9979669,0.000045084576,0.000076321565,0.0008823565],"study_design_scores_gemma":[0.0005632906,0.000424584,0.0033529678,0.000016081223,0.000023233548,0.000002864719,0.000013861689,0.00014156097,0.9943162,0.00008672843,0.0009359523,0.00012264433],"about_ca_topic_score_codex":0.000034841396,"about_ca_topic_score_gemma":0.0000126122995,"teacher_disagreement_score":0.006558375,"about_ca_system_score_codex":0.000007875213,"about_ca_system_score_gemma":0.00005366463,"threshold_uncertainty_score":0.53340924},"labels":[],"label_agreement":null},{"id":"W2791106424","doi":"10.1016/j.molcel.2018.02.002","title":"The Ubiquitin E3/E4 Ligase UBE4A Adjusts Protein Ubiquitylation and Accumulation at Sites of DNA Damage, Facilitating Double-Strand Break Repair","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institute of General Medical Sciences; National Cancer Institute; European Research Council; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Universidad de Sevilla; Medical Research Council; Dr. Miriam and Sheldon G. Adelson Medical Research Foundation; National Science Foundation; A-T Children's Project; American Cancer Society; Israel Cancer Research Fund; Israel Science Foundation; National Natural Science Foundation of China; Ministerio de Economía y Competitividad","keywords":"Ubiquitin ligase; Biology; Ubiquitin; DNA repair; DNA damage; Homologous recombination; DNA ligase; Cell biology; DNA; DNA Ligases; Genetics; Molecular biology; Gene","score_opus":0.016667333509254565,"score_gpt":0.2667753621186635,"score_spread":0.2501080286094089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791106424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950947,0.0005138359,0.0015876993,0.00005629942,0.000043930693,0.0006673656,0.000020623746,0.000043859098,0.0019716644],"genre_scores_gemma":[0.99580324,0.000016458636,0.0026961865,0.00006308062,0.00007523929,0.00004061183,0.00013393121,0.000029760453,0.0011415159],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984855,0.000147755,0.00034884282,0.00046464952,0.00026142897,0.00029178898],"domain_scores_gemma":[0.99890375,0.000029983115,0.00020133455,0.0005519846,0.00022246751,0.00009045325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053248106,0.00021207688,0.0001605824,0.000042415246,0.00020575084,0.000038815095,0.0001665516,0.00020296026,0.000016938871],"category_scores_gemma":[0.00011619722,0.00018648872,0.00012196833,0.00011093996,0.00018927906,0.000011651583,0.00024640362,0.000088698034,0.000010474814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026757357,0.0000357625,0.0003241354,0.00008434828,0.000029897963,0.0000052544465,0.00024228757,0.000049092818,0.99775994,0.00012792146,0.000084331055,0.0009894304],"study_design_scores_gemma":[0.0010034869,0.0004556288,0.00052825594,0.000028533344,0.00003328624,0.000005564758,0.000105912484,0.0015140888,0.9930045,0.00015943543,0.0029610097,0.00020030861],"about_ca_topic_score_codex":0.00003068481,"about_ca_topic_score_gemma":0.000118206175,"teacher_disagreement_score":0.0047554756,"about_ca_system_score_codex":0.00002274607,"about_ca_system_score_gemma":0.0000449705,"threshold_uncertainty_score":0.7604789},"labels":[],"label_agreement":null},{"id":"W2794049848","doi":"10.1016/j.molcel.2018.02.005","title":"Dynamic Regulation of Long-Chain Fatty Acid Oxidation by a Noncanonical Interaction between the MCL-1 BH3 Helix and VLCAD","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Analytical Chemistry and Sensors","field":"Chemical Engineering","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; Leukemia and Lymphoma Society; National Cancer Institute; National Institutes of Health; National Science Foundation","keywords":"Biology; Helix (gastropod); Biochemistry; Fatty acid; Chain (unit); Cell biology; Beta oxidation; Biophysics","score_opus":0.005707042000299564,"score_gpt":0.22710228439486407,"score_spread":0.2213952423945645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794049848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.821951,0.000072090865,0.17631009,0.00019326768,0.00001846951,0.00006233296,0.0000058226647,0.000021892994,0.0013650818],"genre_scores_gemma":[0.9992094,0.0000054228854,0.000374576,0.00003935811,0.00003930138,0.000002404646,0.00005664404,0.000014002707,0.00025888177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930364,0.000029216562,0.00020414684,0.00018148549,0.00014750753,0.00013401096],"domain_scores_gemma":[0.9995758,0.000059244932,0.00006956373,0.00018892999,0.000049006263,0.000057483572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009774211,0.00010457766,0.00012601216,0.000017542516,0.000040269664,0.000013206098,0.00008805451,0.00011450225,0.00006230688],"category_scores_gemma":[0.00006519402,0.00008712629,0.000053864987,0.000095287236,0.00009971634,0.000047173406,0.00003898826,0.00015851097,0.00001643966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015479747,0.0000149208,0.00017702751,0.00003382643,0.00001739532,0.0000010317291,0.00004644741,0.000101382444,0.99858254,0.000041290652,0.00003881473,0.0009298266],"study_design_scores_gemma":[0.00017825686,0.000031879543,0.00055723416,0.000019278661,0.000042692613,0.0000018792183,0.000020670259,0.048552357,0.9501587,0.00007675897,0.00026827338,0.00009202841],"about_ca_topic_score_codex":0.000011920186,"about_ca_topic_score_gemma":0.0000017128187,"teacher_disagreement_score":0.17725845,"about_ca_system_score_codex":0.000039480197,"about_ca_system_score_gemma":0.0000071748777,"threshold_uncertainty_score":0.3552907},"labels":[],"label_agreement":null},{"id":"W2796092158","doi":"10.1016/j.molcel.2018.03.001","title":"Odilorhabdins, Antibacterial Agents that Cause Miscoding by Binding at a New Ribosomal Site","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":139,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Micropharma (Canada)","funders":"Argonne National Laboratory; Nuclear Physics; Direction Générale de l’Armement; Office of Science; Illinois State University; National Institutes of Health; National Center for Research Resources; National Institute of General Medical Sciences; European Federation of Pharmaceutical Industries and Associations","keywords":"Biology; Binding site; Ribosomal protein; Computational biology; Ribosome; Biochemistry; RNA","score_opus":0.014552200582296447,"score_gpt":0.24610305395952817,"score_spread":0.23155085337723172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796092158","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99382114,0.00031756202,0.0014790898,0.00009959284,0.0008285549,0.00024068146,0.00007448284,0.000034382894,0.003104536],"genre_scores_gemma":[0.98834425,0.000107334236,0.00083840836,0.000374569,0.0006393377,0.0000016506207,0.0006176579,0.000083532555,0.008993286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980602,0.0000882562,0.00027255836,0.0007267685,0.00025682512,0.0005953666],"domain_scores_gemma":[0.99887407,0.000006745363,0.0001775897,0.00064715516,0.000049875787,0.00024454814],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011646461,0.00034405087,0.0002413514,0.000055735116,0.00019708656,0.00011617788,0.00036176405,0.00027747377,0.0002850326],"category_scores_gemma":[0.000036098438,0.00035966828,0.00015794305,0.00010987794,0.00015927709,0.0000106943035,0.0002933994,0.0000978953,0.00037874916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016625736,0.000047210586,0.024709968,0.000020549756,0.000057723115,0.00005148084,0.00008060129,9.050515e-7,0.9249266,0.00000439999,0.0498591,0.00007521523],"study_design_scores_gemma":[0.0008600294,0.00020680677,0.0021473214,0.000028129742,0.000044639153,0.000016385091,0.000018061035,0.000008211358,0.87042886,0.0000045028096,0.12585796,0.00037907276],"about_ca_topic_score_codex":0.000050523213,"about_ca_topic_score_gemma":0.00003517135,"teacher_disagreement_score":0.075998865,"about_ca_system_score_codex":0.000059108832,"about_ca_system_score_gemma":0.00007263972,"threshold_uncertainty_score":0.9998855},"labels":[],"label_agreement":null},{"id":"W2796261729","doi":"10.1016/j.molcel.2018.02.034","title":"Separating Actin-Dependent Chemokine Receptor Nanoclustering from Dimerization Indicates a Role for Clustering in CXCR4 Signaling and Function","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Agencia Estatal de Investigación; Ministerio de Economía y Competitividad; Generalitat de Catalunya; University of Oxford; Centres de Recerca de Catalunya","keywords":"Biology; Chemokine receptor; Cell biology; Nanoclusters; Actin; Chemokine; Signal transduction; Receptor; Actin cytoskeleton; Motility; G protein-coupled receptor; Biophysics; Cytoskeleton; Cell; Biochemistry; Materials science; Nanotechnology","score_opus":0.008611380374303238,"score_gpt":0.2390206382587034,"score_spread":0.23040925788440017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796261729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9580175,0.00023450419,0.040433004,0.00009284195,0.00023080313,0.00045266544,0.000006171845,0.000046968795,0.00048553073],"genre_scores_gemma":[0.992303,0.0000061726737,0.006909086,0.00018490673,0.00027561624,0.000032234402,0.000078086734,0.000052215215,0.00015867222],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987865,0.000029394641,0.00031585712,0.00041385947,0.00019223726,0.00026216416],"domain_scores_gemma":[0.9995056,0.000035052657,0.00014774848,0.0001539233,0.00006356111,0.00009412065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015986126,0.00018784628,0.00027061524,0.00011552423,0.00009901653,0.000043386393,0.000058557598,0.00014347318,0.000099201185],"category_scores_gemma":[0.00006347575,0.00019474742,0.000075787175,0.0001840853,0.000029212402,0.00008442153,0.000107692715,0.00014674349,0.000004926512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020594153,0.000049342012,0.005608335,0.00012119204,0.000023406757,0.00000240183,0.00058753137,0.00016634143,0.989037,0.000001559691,0.000008819981,0.00418816],"study_design_scores_gemma":[0.0019464875,0.00017784466,0.00042879098,0.00024862372,0.000069305956,0.0000038143446,0.00025448334,0.017784879,0.9779229,0.000047876092,0.0009195988,0.00019537279],"about_ca_topic_score_codex":0.000070970855,"about_ca_topic_score_gemma":0.000014494582,"teacher_disagreement_score":0.0342855,"about_ca_system_score_codex":0.00009536612,"about_ca_system_score_gemma":0.000042177206,"threshold_uncertainty_score":0.79415697},"labels":[],"label_agreement":null},{"id":"W2796906206","doi":"10.1016/j.molcel.2018.03.012","title":"Dynamics of PARKIN-Dependent Mitochondrial Ubiquitylation in Induced Neurons and Model Systems Revealed by Digital Snapshot Proteomics","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":197,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; Michael J. Fox Foundation for Parkinson's Research","keywords":"Parkin; Mitophagy; Biology; Cell biology; Ubiquitin ligase; Ubiquitin; PINK1; Phosphorylation; Endocytic cycle; Ubiquitin-Protein Ligases; Mitochondrion; Signal transduction; Biochemistry; Endocytosis; Receptor; Autophagy; Apoptosis","score_opus":0.008914647816676866,"score_gpt":0.24047765540907154,"score_spread":0.23156300759239468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796906206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98922247,0.00019809927,0.007901191,0.000080566235,0.0001037919,0.0008321548,0.00005127056,0.00001501648,0.0015954584],"genre_scores_gemma":[0.9992398,0.0000150644455,0.00025926338,0.00007245456,0.000048541555,0.000028615104,0.00014964349,0.000025335117,0.00016128537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999072,0.000037627018,0.00027417447,0.00023900672,0.0002116284,0.00016557227],"domain_scores_gemma":[0.9994732,0.000011732802,0.00010639107,0.00025137278,0.00006234853,0.00009495515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000060794275,0.00013078806,0.00023361981,0.00008029107,0.000022985641,0.000025081834,0.00006772729,0.000117201576,0.000006845663],"category_scores_gemma":[0.000023382741,0.00012846211,0.000047825633,0.000096533,0.00005528812,0.00006607737,0.000037862057,0.00012306438,0.0000025862996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004525143,0.0003192022,0.002511073,0.00014312471,0.00003707423,0.00005339073,0.0002170872,0.00023053176,0.9954715,0.0002140965,0.000095352916,0.000255092],"study_design_scores_gemma":[0.0075479886,0.0012530279,0.0018862488,0.00020258484,0.00016538179,0.000026163352,0.00011848598,0.4094407,0.5775487,0.0013133936,0.00007017517,0.0004271805],"about_ca_topic_score_codex":0.000028248985,"about_ca_topic_score_gemma":0.0000045007614,"teacher_disagreement_score":0.4179228,"about_ca_system_score_codex":0.000056072244,"about_ca_system_score_gemma":0.00007722153,"threshold_uncertainty_score":0.52385324},"labels":[],"label_agreement":null},{"id":"W2801628465","doi":"10.1016/j.molcel.2018.03.037","title":"Phosphatidylinositol-5-Phosphate 4-Kinases Regulate Cellular Lipid Metabolism By Facilitating Autophagy","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":113,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; National Cancer Institute, Cairo University; Biotechnology and Biological Sciences Research Council; National Cancer Institute; National Institutes of Health; Mary Kay Foundation; American Cancer Society; U.S. Department of Defense; Lustgarten Foundation; American Association for Cancer Research","keywords":"Biology; Autophagy; Phosphatidylinositol; Kinase; Cell biology; Lipid metabolism; Protein-Serine-Threonine Kinases; Metabolism; Biochemistry; Phosphate; Protein kinase A; Apoptosis","score_opus":0.005814138429088461,"score_gpt":0.23641886164038425,"score_spread":0.2306047232112958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801628465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96174663,0.021686438,0.00448881,0.000268915,0.0005515264,0.00056174793,0.000047095175,0.00027553586,0.010373292],"genre_scores_gemma":[0.9868652,0.00015253726,0.002334812,0.0026077842,0.00034368638,0.000039870825,0.0001467094,0.00009522545,0.007414157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975664,0.00011249591,0.00047119308,0.0006612046,0.000537131,0.000651558],"domain_scores_gemma":[0.9983731,0.000048051395,0.00017342904,0.0008050081,0.00020159259,0.00039882484],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020471754,0.0004163331,0.00053141866,0.00010136883,0.00022153194,0.00005736673,0.00024632196,0.00019256191,0.0011174097],"category_scores_gemma":[0.000051309198,0.00038917313,0.00031187956,0.0003345374,0.0002570841,0.00012162716,0.000083412,0.00022887143,0.00069191976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023362001,0.0003803003,0.000117508665,0.00011577048,0.0001842328,0.00047324374,0.00058187364,0.000008947574,0.98114043,0.00036036846,0.007167167,0.009236544],"study_design_scores_gemma":[0.0020974337,0.00030039728,0.00051762984,0.00005245483,0.00024137052,0.000009727678,0.00008128596,0.00069111574,0.89869446,0.00032295787,0.09663882,0.00035236575],"about_ca_topic_score_codex":0.000068431196,"about_ca_topic_score_gemma":6.212813e-7,"teacher_disagreement_score":0.08947165,"about_ca_system_score_codex":0.00005082836,"about_ca_system_score_gemma":0.00011417533,"threshold_uncertainty_score":0.999856},"labels":[],"label_agreement":null},{"id":"W2804760342","doi":"10.1016/j.molcel.2018.05.006","title":"At Long Last, a C-Terminal Bookend for the Ubiquitin Code","year":2018,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Biology; Ubiquitin; Proteasome; Sequence (biology); Terminal (telecommunication); Computational biology; Cell biology; Genetics; Gene; Engineering","score_opus":0.01578952635573849,"score_gpt":0.24365455496712518,"score_spread":0.2278650286113867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804760342","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14006889,0.05392009,0.12601048,0.47077295,0.007375388,0.017839244,0.0070467554,0.0004366821,0.17652951],"genre_scores_gemma":[0.020393267,0.00027049094,0.0020810117,0.7863143,0.016829943,0.0014176068,0.006541995,0.0005755028,0.16557588],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976038,0.00014572195,0.00032890314,0.0008592703,0.00031798828,0.0007443688],"domain_scores_gemma":[0.9983613,0.000061756786,0.00024063287,0.0010973229,0.00015093728,0.00008804843],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002864212,0.00052290945,0.000322501,0.00005472858,0.00028307477,0.00008879969,0.00080847467,0.0010227859,0.00028208387],"category_scores_gemma":[0.000050174734,0.00042449663,0.0005016294,0.00005720987,0.0002525066,0.0000020231648,0.00046728028,0.0005537533,0.00018569696],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007905141,0.00002157726,0.000015463904,0.0002495335,0.00010770992,0.00029558127,0.000028291966,0.0000030353835,0.14003897,0.0000043850105,0.85839295,0.0007634692],"study_design_scores_gemma":[0.00035455427,0.00027144063,0.0000034056045,0.000025538311,0.00009809827,0.00006302738,0.000003168562,0.000018520217,0.4090114,0.000031775206,0.589791,0.00032808352],"about_ca_topic_score_codex":0.0000071872846,"about_ca_topic_score_gemma":0.000044188622,"teacher_disagreement_score":0.31554136,"about_ca_system_score_codex":0.000042616753,"about_ca_system_score_gemma":0.00013749624,"threshold_uncertainty_score":0.9998207},"labels":[],"label_agreement":null},{"id":"W2809080492","doi":"10.1016/j.molcel.2018.05.013","title":"Direct Phosphorylation of SRC Homology 3 Domains by Tyrosine Kinase Receptors Disassembles Ligand-Induced Signaling Networks","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Institut National de la Recherche Scientifique; Université Laval; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Centre hospitalier de l'Université Laval; PROTEO","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Mitacs; Canadian Institutes of Health Research; Fondation du cancer du sein du Québec","keywords":"Biology; Proto-oncogene tyrosine-protein kinase Src; Phosphorylation; Cell biology; Receptor tyrosine kinase; Signal transduction; Receptor; Tyrosine kinase; SH2 domain; Tyrosine; Tyrosine phosphorylation; Protein-Tyrosine Kinases; Homology (biology); Biochemistry; Gene","score_opus":0.004929459412172305,"score_gpt":0.21492399008423915,"score_spread":0.20999453067206686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809080492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9571182,0.0020898336,0.037266675,0.000024324505,0.0002895059,0.00020543546,0.000016793638,0.000018436578,0.0029707907],"genre_scores_gemma":[0.9976251,0.0002611224,0.00095398386,0.00027934375,0.00016806308,0.000014492605,0.00035857846,0.000050645172,0.00028863727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871224,0.000098768505,0.00030172965,0.00043609072,0.00011915858,0.00033200902],"domain_scores_gemma":[0.9991698,0.0000143259895,0.00017237525,0.00041756043,0.00013458304,0.00009130728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017430949,0.00022905982,0.00023917962,0.000046142355,0.000088384426,0.000018783343,0.00021295557,0.0003078311,0.000018651532],"category_scores_gemma":[0.000030904786,0.0002347201,0.00014281497,0.00015531397,0.00011607855,0.0000043718082,0.00010776129,0.00009433965,0.000008583067],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007677207,0.00011810125,0.00046591635,0.000016699252,0.00004735115,0.000004441833,0.000032914577,0.00016571546,0.99577504,0.00002220161,0.002434587,0.00084024866],"study_design_scores_gemma":[0.00051436643,0.0005083326,0.000034911456,0.000018965107,0.000049249982,0.0000024769897,0.000028036931,0.00032569925,0.9886293,0.000015063356,0.009613967,0.00025965355],"about_ca_topic_score_codex":0.000044798868,"about_ca_topic_score_gemma":0.00001929948,"teacher_disagreement_score":0.04050693,"about_ca_system_score_codex":0.000019576852,"about_ca_system_score_gemma":0.000051335417,"threshold_uncertainty_score":0.9571608},"labels":[],"label_agreement":null},{"id":"W2809592012","doi":"10.1016/j.molcel.2018.05.018","title":"Histone Methylation by SETD1A Protects Nascent DNA through the Nucleosome Chaperone Activity of FANCD2","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; University of Birmingham; Medical Research Council Canada; Cancer Research UK","keywords":"Biology; FANCD2; Cell biology; Histone; Histone methylation; Histone methyltransferase; DNA replication; Histone H3; Control of chromosome duplication; Genome instability; FANCA; DNA repair; Genetics; DNA methylation; DNA damage; DNA; Fanconi anemia; Gene; Gene expression","score_opus":0.00749194732902144,"score_gpt":0.24509802975613754,"score_spread":0.2376060824271161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809592012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96070313,0.00076062157,0.033347044,0.00024869063,0.00015042908,0.0005635523,0.000018902838,0.000024053777,0.004183545],"genre_scores_gemma":[0.99711055,0.00003236103,0.0015629866,0.00032279253,0.00008475572,0.000042980482,0.000038592752,0.000041932686,0.0007630685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987462,0.00014893529,0.00018016396,0.0004036324,0.00025562567,0.00026544827],"domain_scores_gemma":[0.998996,0.0000065493828,0.0001697627,0.0006698443,0.00010702328,0.000050782684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018921294,0.00019066893,0.00016820792,0.000019625739,0.000096295465,0.000012703078,0.0002722583,0.00017214594,0.00004180941],"category_scores_gemma":[0.000038959857,0.00015816244,0.00012146208,0.000118031865,0.00017793373,0.0000067873416,0.00016430132,0.00010373983,0.000027589784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006430485,0.00013055124,0.0000037331672,0.000026276659,0.00003445348,0.0000021597227,0.00016111774,0.00000692744,0.9973046,0.00009905914,0.00079947576,0.00136732],"study_design_scores_gemma":[0.00038605725,0.00051331084,0.000032746164,0.000007778241,0.000023290444,0.0000027588155,0.000024597775,0.00008288615,0.9579282,0.00019697552,0.040629506,0.00017192733],"about_ca_topic_score_codex":0.00005110862,"about_ca_topic_score_gemma":0.0000089327295,"teacher_disagreement_score":0.03983003,"about_ca_system_score_codex":0.000028912358,"about_ca_system_score_gemma":0.000044478387,"threshold_uncertainty_score":0.6449677},"labels":[],"label_agreement":null},{"id":"W2883604250","doi":"10.1016/j.molcel.2018.09.016","title":"Polymer Simulations of Heteromorphic Chromatin Predict the 3D Folding of Complex Genomic Loci","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":209,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"H2020 European Research Council; Medical Research Council; Medical Research Council Canada","keywords":"Biology; Chromatin; Folding (DSP implementation); Computational biology; Polymer physics; Protein folding; Evolutionary biology; Genetics; Cell biology; DNA; Polymer","score_opus":0.009206873666067605,"score_gpt":0.22033498285359324,"score_spread":0.21112810918752564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883604250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888868,0.0004963028,0.008460655,0.000041906034,0.000055573328,0.0001842799,0.000087221604,0.0000054571406,0.0017818088],"genre_scores_gemma":[0.99757874,0.00001682272,0.0019073029,0.00011606156,0.00007014426,0.0000040640775,0.0001603149,0.000030260277,0.000116263756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990951,0.00006347252,0.00031866075,0.00021178486,0.00012625108,0.00018475947],"domain_scores_gemma":[0.99910635,0.0000125096885,0.00021454114,0.00052816304,0.0000978711,0.00004054689],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001071996,0.0001387059,0.00016442765,0.00003519633,0.00007651564,0.0000104517385,0.00030729652,0.00009527287,0.000077206845],"category_scores_gemma":[0.0000144161995,0.00011973638,0.000117890064,0.00008601259,0.0002315311,0.0000016465402,0.00017143479,0.00005205709,0.000006021627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012529609,0.00005016575,0.0004062127,0.000030803396,0.000050873692,8.646911e-7,0.000083909894,0.0014596912,0.9974779,0.000056705296,0.00016247683,0.00020786487],"study_design_scores_gemma":[0.00042890874,0.00028642462,0.00097016635,0.000009436054,0.000046662335,0.0000039386982,0.000036179914,0.02109389,0.9753973,0.00005916005,0.0015320606,0.0001358979],"about_ca_topic_score_codex":0.000029481142,"about_ca_topic_score_gemma":0.000015916201,"teacher_disagreement_score":0.022080628,"about_ca_system_score_codex":0.000010215338,"about_ca_system_score_gemma":0.00005078886,"threshold_uncertainty_score":0.4882708},"labels":[],"label_agreement":null},{"id":"W2885168066","doi":"10.1016/j.molcel.2018.07.006","title":"In Vivo Evidence for ATPase-Dependent DNA Translocation by the Bacillus subtilis SMC Condensin Complex","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":93,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Science Foundation of Sri Lanka; Vallee Foundation; Natural Sciences and Engineering Research Council of Canada; Indiana University; National Institutes of Health; National Science Foundation","keywords":"Condensin; Biology; Bacillus subtilis; ATPase; Cell biology; DNA; ATP hydrolysis; Chromosome segregation; Saccharomyces cerevisiae; Biophysics; Cohesin; Chromosome; Genetics; Biochemistry; Bacteria; Chromatin; Enzyme; Gene","score_opus":0.01987562823539506,"score_gpt":0.25900543097819767,"score_spread":0.2391298027428026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885168066","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9712598,0.00113427,0.02560893,0.0006400155,0.000126984,0.0005019363,0.0000730382,0.0000078019875,0.0006472523],"genre_scores_gemma":[0.9969321,0.000100137215,0.00082160864,0.001112366,0.00008131988,0.00004585912,0.00009107415,0.00003339081,0.0007821398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892795,0.00007049269,0.0002371208,0.0003674007,0.00013076766,0.00026625782],"domain_scores_gemma":[0.9992885,0.00002326452,0.00007916738,0.00044742695,0.00010807414,0.000053583335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025753793,0.000163969,0.00012779221,0.000023877994,0.000091334936,0.000038003884,0.0003032238,0.00012690181,0.000050044153],"category_scores_gemma":[0.000038119982,0.00014571662,0.00009326469,0.00007205301,0.00012651358,0.0000040433056,0.000057513964,0.000061487735,0.000014107327],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059564936,0.000043816868,0.00003655718,0.000021169117,0.000012913495,0.000002173634,0.00009404624,0.00007103109,0.9936145,0.000045027697,0.0056008925,0.00039830685],"study_design_scores_gemma":[0.00071831373,0.00023578764,0.000055567292,0.000011752419,0.00001772424,0.0000068068557,0.00007355454,0.0038262147,0.96423155,0.00015354776,0.030477116,0.00019203802],"about_ca_topic_score_codex":0.00007112984,"about_ca_topic_score_gemma":0.0003023815,"teacher_disagreement_score":0.029382924,"about_ca_system_score_codex":0.00003131444,"about_ca_system_score_gemma":0.000063345244,"threshold_uncertainty_score":0.59421515},"labels":[],"label_agreement":null},{"id":"W2887405675","doi":"10.1016/j.molcel.2018.07.023","title":"Single Live Cell Monitoring of Protein Turnover Reveals Intercellular Variability and Cell-Cycle Dependence of Degradation Rates","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fondation Pierre Mercier; Canadian Institutes of Health Research; SystemsX.ch; Carigest","keywords":"Biology; Protein turnover; Protein degradation; Cell biology; Cytokinesis; Proteasome; Cell cycle; Protein biosynthesis; Intracellular; Cell; Biochemistry; Cell division","score_opus":0.00666042578323316,"score_gpt":0.24674808047805494,"score_spread":0.24008765469482177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887405675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9563487,0.0010971689,0.041208785,0.0000063632506,0.00007014689,0.00023382479,0.000007106046,0.000006102108,0.0010217949],"genre_scores_gemma":[0.9890263,0.000027221871,0.010604958,0.000006148515,0.000054674776,0.000007416677,0.0000126689765,0.000021763475,0.0002388347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999048,0.00006760794,0.00026867536,0.0003130676,0.00012917914,0.00017345493],"domain_scores_gemma":[0.9993133,0.000012948086,0.00012360606,0.00035037997,0.00014043601,0.000059325386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022310119,0.00014889293,0.00016153012,0.000035623816,0.000026641375,0.000011545721,0.00014023288,0.00012527624,0.000014481967],"category_scores_gemma":[0.00005028488,0.00015644227,0.000063270556,0.00007367383,0.00009091753,0.0000051291627,0.00012511239,0.00006857339,0.000002426123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026926196,0.00010048419,0.0027290676,0.00020419263,0.000009992217,0.0000019142765,0.0001534023,0.00013346803,0.9962416,0.000005512712,0.0000064985893,0.00038690952],"study_design_scores_gemma":[0.00029494535,0.00038363753,0.0007556767,0.000041151787,0.000024353862,0.000001457107,0.0001096396,0.00019581127,0.9978345,0.00010373508,0.00010592486,0.00014917702],"about_ca_topic_score_codex":0.00003126087,"about_ca_topic_score_gemma":0.0000025938248,"teacher_disagreement_score":0.032677606,"about_ca_system_score_codex":0.000010446846,"about_ca_system_score_gemma":0.000033138433,"threshold_uncertainty_score":0.63795304},"labels":[],"label_agreement":null},{"id":"W2889729436","doi":"10.1016/j.molcel.2018.08.005","title":"Structural Basis for Regulation of Phosphoinositide Kinases and Their Involvement in Human Disease","year":2018,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":266,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Biology; Kinase; Disease; Protein-Serine-Threonine Kinases; Phosphoinositide 3-kinase; Cell biology; Human disease; Computational biology; Signal transduction; Protein kinase A; Genetics; PI3K/AKT/mTOR pathway; Gene; Internal medicine","score_opus":0.04109922541070341,"score_gpt":0.3339861591482495,"score_spread":0.29288693373754604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889729436","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034528274,0.9629363,0.00006286262,0.000010949979,0.000037811926,0.0021513333,0.000081569786,0.000011592627,0.0001793182],"genre_scores_gemma":[0.078483224,0.9192275,0.00038801393,0.000060977745,0.00011900307,0.0002948279,0.00091567147,0.00010969226,0.00040110562],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984232,0.000090774134,0.00050323055,0.00043967584,0.00025876617,0.0002843595],"domain_scores_gemma":[0.9988762,0.00011907249,0.0001989108,0.0005339471,0.00009964866,0.00017223132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021305341,0.00029790154,0.0009645022,0.00022232268,0.00003832527,0.00001553153,0.00013263743,0.00014643991,0.000049161805],"category_scores_gemma":[0.00009129875,0.00022409033,0.0003217887,0.00018699895,0.00015090643,0.000025470119,0.000125261,0.00012361289,0.0000021556314],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067186594,0.0005429799,0.00015061027,0.5098158,0.0008103471,0.0005820162,0.00082450674,0.000018928004,0.00564738,0.00084873044,0.0020151222,0.4780717],"study_design_scores_gemma":[0.030198744,0.002104823,0.0004656964,0.09732886,0.0045864508,0.00008958683,0.00018462402,0.005269635,0.08380746,0.0021107355,0.77185094,0.0020024637],"about_ca_topic_score_codex":0.00020785021,"about_ca_topic_score_gemma":0.00001702946,"teacher_disagreement_score":0.76983577,"about_ca_system_score_codex":0.0029414436,"about_ca_system_score_gemma":0.002310008,"threshold_uncertainty_score":0.9138138},"labels":[],"label_agreement":null},{"id":"W2889812869","doi":"10.1016/j.molcel.2018.09.001","title":"The Mcm2-Ctf4-Polα Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":195,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; National Institutes of Health; National Institute of General Medical Sciences; Medical Research Council Canada; Wellcome Trust","keywords":"Biology; Replisome; Genetics; DNA replication; Helicase; Cell biology; Prokaryotic DNA replication; DNA; Nucleosome; Epigenetics; Histone; Origin of replication; Eukaryotic DNA replication; Gene","score_opus":0.005937917657568832,"score_gpt":0.23404911705946066,"score_spread":0.22811119940189184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889812869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97009015,0.0011193726,0.018729972,0.0003163047,0.00033481783,0.000345626,0.000042896496,0.000047786416,0.008973051],"genre_scores_gemma":[0.9953203,0.000041755055,0.0008454828,0.00063663156,0.00012489558,0.000043648794,0.00006321655,0.000048587164,0.0028754799],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842376,0.000090397414,0.00023916301,0.00051781855,0.00024063695,0.00048822715],"domain_scores_gemma":[0.9990761,0.000012124961,0.000019205965,0.0006289312,0.00008774668,0.00017587644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000232275,0.000251197,0.00015721607,0.000040418985,0.00023685498,0.000052031955,0.0003909201,0.00014312207,0.000070254995],"category_scores_gemma":[0.000030592328,0.00020994106,0.00018958947,0.000118083895,0.00015240225,0.0000037967027,0.00010952825,0.00010384248,0.00017598618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009680521,0.000049776227,0.000051981402,0.00001176834,0.000038420047,0.000015313622,0.00024627493,0.00001507924,0.9947051,0.00011083176,0.0016288166,0.0030298806],"study_design_scores_gemma":[0.00043483777,0.0005416195,0.000059611586,0.0000072194443,0.000021291344,0.000006995088,0.00018699392,0.000043693166,0.85063237,0.000084402775,0.14773716,0.00024380734],"about_ca_topic_score_codex":0.00003849409,"about_ca_topic_score_gemma":0.00007368915,"teacher_disagreement_score":0.14610834,"about_ca_system_score_codex":0.000030323688,"about_ca_system_score_gemma":0.000049901595,"threshold_uncertainty_score":0.8561148},"labels":[],"label_agreement":null},{"id":"W2891885918","doi":"10.1016/j.molcel.2018.08.018","title":"Efficient and Accurate Quantitative Profiling of Alternative Splicing Patterns of Any Complexity on a Laptop","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":218,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; EMBO","keywords":"Biology; Profiling (computer programming); Computational biology; Laptop; Alternative splicing; Bioinformatics; Genetics; Exon; Computer science; Gene; Operating system","score_opus":0.032601598672691495,"score_gpt":0.3164912180641551,"score_spread":0.2838896193914636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891885918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9765658,0.00013321123,0.021941105,0.00002318747,0.000023359453,0.00020206913,0.000035511875,0.0000030776666,0.0010726745],"genre_scores_gemma":[0.9973586,0.000018768415,0.0024417082,0.00005545932,0.000023248222,0.0000048707166,0.000017172175,0.000013949261,0.00006622556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990903,0.000086155575,0.00018533754,0.0002644077,0.00017264481,0.00020116274],"domain_scores_gemma":[0.99940187,0.000019559337,0.00012592714,0.00021711968,0.0001709884,0.00006456671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019632062,0.00011320694,0.00016093241,0.00005923327,0.000042381187,0.000008116144,0.00012535484,0.000049098362,0.0000073014035],"category_scores_gemma":[0.00005100852,0.00010188885,0.000055270717,0.00006870744,0.00017409543,0.0000013156618,0.00012454431,0.000071341354,0.0000024115684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016029064,0.0000743719,0.0019032386,0.00007130803,0.000033856766,0.000006061044,0.00014808045,0.00040336416,0.99595344,0.0010179332,0.0000045978604,0.00022348244],"study_design_scores_gemma":[0.000472371,0.0011209657,0.0012766507,0.000054125776,0.000007877139,0.0000013125032,0.00019977936,0.010477191,0.9862131,0.000055138364,0.000025601417,0.000095896765],"about_ca_topic_score_codex":0.0001448784,"about_ca_topic_score_gemma":0.000016224485,"teacher_disagreement_score":0.020792795,"about_ca_system_score_codex":0.0000075127236,"about_ca_system_score_gemma":0.000029579058,"threshold_uncertainty_score":0.4154907},"labels":[],"label_agreement":null},{"id":"W2892569542","doi":"10.1016/j.molcel.2018.08.020","title":"Comprehensive Mapping of Histone Modifications at DNA Double-Strand Breaks Deciphers Repair Pathway Chromatin Signatures","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":319,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; Fundacja na rzecz Nauki Polskiej; Narodowe Centrum Nauki; Fondation pour la Recherche Médicale; Ligue Contre le Cancer; Agence Nationale de la Recherche","keywords":"Biology; Chromatin; Histone; DNA; Cell biology; DNA repair; Genetics; Computational biology; Histone code; Double strand; Nucleosome","score_opus":0.014002896135564264,"score_gpt":0.2551855146196655,"score_spread":0.24118261848410122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892569542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97671515,0.0015177521,0.009202575,0.000038906575,0.00016080735,0.00039719258,0.000036444435,0.00006623005,0.011864918],"genre_scores_gemma":[0.99066126,0.000022940269,0.0072881156,0.00022524159,0.000078509765,0.000034273515,0.0001633782,0.00005092132,0.0014753543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984814,0.00008362239,0.00034861092,0.00053989876,0.0002386676,0.00030778785],"domain_scores_gemma":[0.9986146,0.000012272002,0.00019441056,0.00081925566,0.0002405619,0.000118915734],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001125591,0.00024314727,0.00023908204,0.00007199748,0.00012304705,0.000011787005,0.000281928,0.00025553856,0.000073808005],"category_scores_gemma":[0.000016929886,0.00025806934,0.00025037417,0.0001491077,0.00023081107,0.00000412776,0.00018235807,0.000093873496,0.00003567003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085145075,0.00009686414,0.000020751222,0.00006497756,0.00007620504,0.000015633255,0.00017380466,0.00015651727,0.9974544,0.00012681216,0.0014595346,0.00026936247],"study_design_scores_gemma":[0.0010795647,0.00026670183,0.00015043115,0.000021932723,0.000030766438,0.000010719561,0.00008546618,0.00030547997,0.96293515,0.000060471153,0.034789957,0.0002633396],"about_ca_topic_score_codex":0.000031399875,"about_ca_topic_score_gemma":0.000019790636,"teacher_disagreement_score":0.03451922,"about_ca_system_score_codex":0.0000460763,"about_ca_system_score_gemma":0.00007836745,"threshold_uncertainty_score":0.9999871},"labels":[],"label_agreement":null},{"id":"W2899466270","doi":"10.1016/j.molcel.2018.10.008","title":"Genome-wide CRISPR-Cas9 Interrogation of Splicing Networks Reveals a Mechanism for Recognition of Autism-Misregulated Neuronal Microexons","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":140,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canada First Research Excellence Fund; Human Frontier Science Program; Ontario Institute for Regenerative Medicine; EMBO; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Simons Foundation","keywords":"Biology; RNA splicing; Spliceosome; Alternative splicing; CRISPR; Enhancer; Genetics; Computational biology; Mechanism (biology); Gene; RNA; Gene expression; Exon","score_opus":0.013181216728112104,"score_gpt":0.25245005615129307,"score_spread":0.23926883942318097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899466270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77260256,0.000121063065,0.22652155,0.000056351735,0.000060078357,0.00034033103,0.000024618712,0.0000066430275,0.0002668054],"genre_scores_gemma":[0.9950662,0.000033658314,0.0038764314,0.00020934804,0.0000694705,0.000025284728,0.0002913034,0.000035504054,0.00039276635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987955,0.00008876592,0.00034988477,0.00032104686,0.00013855594,0.0003062141],"domain_scores_gemma":[0.99906534,0.000022031985,0.00020067014,0.00030062476,0.00032836263,0.000082976316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026261323,0.00014621303,0.00019465943,0.00008793143,0.00006314772,0.000012409388,0.0001782503,0.0001573376,0.000020558522],"category_scores_gemma":[0.00007648174,0.00015641541,0.00015616711,0.00012249769,0.00009233081,0.000004878164,0.00009632368,0.0000814792,0.0000033767385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017132348,0.00005137576,0.00006393106,0.00007203966,0.00004403543,0.0000022334132,0.000037301877,0.00009087448,0.99869376,0.00007209867,0.00010608535,0.00059495604],"study_design_scores_gemma":[0.0006799722,0.00086364674,0.00064163085,0.000047304275,0.000037385107,0.000004114196,0.000049434995,0.003199692,0.99358463,0.00057745265,0.00017309091,0.00014166345],"about_ca_topic_score_codex":0.000032939814,"about_ca_topic_score_gemma":0.000018941484,"teacher_disagreement_score":0.22264512,"about_ca_system_score_codex":0.000018182833,"about_ca_system_score_gemma":0.00006257159,"threshold_uncertainty_score":0.6378435},"labels":[],"label_agreement":null},{"id":"W2900406456","doi":"10.1016/j.molcel.2018.09.031","title":"MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":213,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; Princess Margaret Cancer Centre; Ontario Institute for Cancer Research; University of Toronto; University Health Network","funders":"Eshelman Institute for Innovation, University of North Carolina at Chapel Hill; Natural Sciences and Engineering Research Council of Canada; Janssen Biotech; Canadian Institutes of Health Research; Innovative Medicines Initiative; Ontario Ministry of Research, Innovation and Science; Canada Research Chairs; Wellcome Trust; Mount Sylvia Diatomite; Ontario Genomics Institute; Canada Foundation for Innovation; Genome Canada; AbbVie; Merck KGaA; Boehringer Ingelheim; Pfizer","keywords":"Biology; Interactome; Transcription factor; Carcinogenesis; Genetics; Histone; Cell biology; Acetylation; Enhancer; DNA-binding protein; Computational biology; Gene","score_opus":0.015492187824190585,"score_gpt":0.24364713127477913,"score_spread":0.22815494345058854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900406456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96551746,0.00021270159,0.021065876,0.0002849902,0.00022230556,0.0009550558,0.000053192347,0.000045070814,0.011643334],"genre_scores_gemma":[0.9879649,0.0000057211582,0.004041992,0.0011137807,0.0003955239,0.0002606028,0.0002118953,0.00006301354,0.0059425314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983073,0.00014434861,0.00024778873,0.0006476303,0.00022610702,0.00042683206],"domain_scores_gemma":[0.9988049,0.000008798838,0.000103958344,0.00057495135,0.00028011826,0.00022725767],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023631784,0.00027813407,0.000197543,0.000078146346,0.00019109531,0.000069160145,0.00031389162,0.00014487433,0.00012536641],"category_scores_gemma":[0.00011889131,0.00026713422,0.00013592506,0.00020175443,0.000077282224,0.0000064544406,0.0002401428,0.00012805358,0.00036529504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010844354,0.0000677066,0.00065754505,0.00003273194,0.000032598793,0.000025143918,0.00006184994,0.000009174083,0.9972589,0.00028791674,0.0011694218,0.00028855525],"study_design_scores_gemma":[0.00031330145,0.0006127598,0.00046842848,0.00004851703,0.0000189176,0.000011738615,0.00004272432,0.000021010166,0.9601183,0.00014221347,0.03785281,0.00034931122],"about_ca_topic_score_codex":0.000012354971,"about_ca_topic_score_gemma":0.000016928212,"teacher_disagreement_score":0.03714064,"about_ca_system_score_codex":0.00002986884,"about_ca_system_score_gemma":0.00011753613,"threshold_uncertainty_score":0.99997807},"labels":[],"label_agreement":null},{"id":"W2904329518","doi":"10.1016/j.molcel.2018.11.006","title":"Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":189,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heart and Stroke Foundation; University of Toronto; SickKids Foundation; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"Structural Genomics Consortium; National Institute of General Medical Sciences; Janssen Biotech; Canadian Institutes of Health Research; Innovative Medicines Initiative; Uehara Memorial Foundation; Canada Foundation for Innovation; Ontario Ministry of Economic Development and Innovation; Wellcome Trust; Medical Research Council; Cancer Research Society; Genome Canada; Boehringer Ingelheim; University of Toronto; Eesti Teadusagentuur; AbbVie; Merck; Pfizer; Natural Sciences and Engineering Research Council of Canada; Alfred P. Sloan Foundation","keywords":"Bromodomain; Interactome; BRD4; BET inhibitor; Biology; Computational biology; Protein–protein interaction; Chromatin; Plasma protein binding; Genetics; Acetylation; Gene; Cell biology","score_opus":0.007724121999411446,"score_gpt":0.26320184555885473,"score_spread":0.25547772355944326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904329518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97851115,0.00037767054,0.010787348,0.00004952414,0.00027180047,0.00013485448,0.0000036735562,0.000015706886,0.009848276],"genre_scores_gemma":[0.99584514,0.000011382177,0.0032716745,0.00032744344,0.0001855938,0.000008347356,0.000051533432,0.000020486686,0.0002784176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990763,0.00007378868,0.00022876685,0.00027028387,0.00013742245,0.00021345777],"domain_scores_gemma":[0.9995952,0.000006521062,0.000095120195,0.00016935405,0.0000632409,0.000070510345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001827664,0.0001247093,0.0001274951,0.000043105658,0.000058890204,0.000014175711,0.00018737215,0.00010362351,0.00007486997],"category_scores_gemma":[0.00008091978,0.00012035671,0.0001569363,0.00009601741,0.000070261594,0.0000048173433,0.00015801561,0.00008393598,0.000023131883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002697475,0.000050230432,0.00043043197,0.000008770415,0.000032064025,0.000012538562,0.000032494623,0.0000058477326,0.9975313,0.000021465878,0.0012519745,0.00059592177],"study_design_scores_gemma":[0.00045305237,0.00024504756,0.000069167036,0.0000118367125,0.000018500357,0.0000018041645,0.000029841189,0.000068526024,0.98063326,0.000032296644,0.01829829,0.0001383724],"about_ca_topic_score_codex":0.0000052119917,"about_ca_topic_score_gemma":7.797644e-7,"teacher_disagreement_score":0.017333975,"about_ca_system_score_codex":0.000011043323,"about_ca_system_score_gemma":0.000026766116,"threshold_uncertainty_score":0.4908004},"labels":[],"label_agreement":null},{"id":"W2906080767","doi":"10.1016/j.molcel.2018.11.022","title":"Defining the Transcriptional Ecosystem","year":2018,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Transcriptional regulation; Gene; Transcription (linguistics); Regulation of gene expression; Transcription factor; Genetics","score_opus":0.009097081420164665,"score_gpt":0.23697669022915552,"score_spread":0.22787960880899086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906080767","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021038466,0.9915985,0.0014195662,0.000008883756,0.00032240743,0.00037507594,0.00016422397,0.000010755971,0.005890226],"genre_scores_gemma":[0.00064584904,0.9963749,0.00060600956,0.00011261551,0.00023842092,0.000081816965,0.0010466386,0.000101194215,0.00079257134],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984995,0.00015982502,0.0004013701,0.00048704795,0.00015764672,0.0002945943],"domain_scores_gemma":[0.99892914,0.00001226763,0.00022008104,0.000718445,0.000052288324,0.00006774861],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023183538,0.00037097625,0.00047922306,0.00003968924,0.00012433833,0.000064374355,0.0006091408,0.00038508215,0.000028499986],"category_scores_gemma":[0.000012345339,0.00026685916,0.0006625653,0.00009044491,0.000055650853,8.20943e-7,0.00014178197,0.00019146419,0.00023079767],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004865222,0.0006036016,0.000008781477,0.0554011,0.003123037,0.00024727426,0.000264493,0.00027055872,0.018692622,0.02067685,0.029731626,0.8709314],"study_design_scores_gemma":[0.00010156897,0.00006999404,2.3262757e-7,0.00043447554,0.00027217393,0.000051938685,0.000007639814,0.00003279028,0.00040574127,0.00002973112,0.99828273,0.00031099765],"about_ca_topic_score_codex":0.0000015588915,"about_ca_topic_score_gemma":0.000008428705,"teacher_disagreement_score":0.9685511,"about_ca_system_score_codex":0.000029298899,"about_ca_system_score_gemma":0.00023729628,"threshold_uncertainty_score":0.99997836},"labels":[],"label_agreement":null},{"id":"W2906993189","doi":"10.1016/j.molcel.2018.12.012","title":"CDK4 Inhibitors Thwart Immunity by Inhibiting Phospho-RB-NF-κB Complexes","year":2019,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; London Health Sciences Centre; Cancer Care Ontario; Western University","funders":"","keywords":"Retinoblastoma; Biology; Retinoblastoma protein; Molecular biology; Transcription factor; Phosphorylation; NF-κB; Cell cycle; Cancer research; Cell biology; Cell; Signal transduction; Gene; Biochemistry","score_opus":0.008661321601578132,"score_gpt":0.21721802502925866,"score_spread":0.20855670342768054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906993189","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24604946,0.06146576,0.005788419,0.43400177,0.008888482,0.011984431,0.0021472145,0.0024615268,0.22721294],"genre_scores_gemma":[0.13997285,0.00035356727,0.001529393,0.81957215,0.00275426,0.00019759382,0.013113851,0.0013141747,0.021192145],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99407154,0.00036624662,0.0011010973,0.0014557114,0.0015618416,0.0014435726],"domain_scores_gemma":[0.99663264,0.0001483971,0.0006755753,0.001961657,0.00032136,0.00026037596],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0003953993,0.0012672832,0.001592791,0.00042798163,0.00021880308,0.00014411676,0.00062051107,0.0022510944,0.00056653545],"category_scores_gemma":[0.00014148487,0.0013575237,0.0010273593,0.0006059994,0.00028600614,0.000093535156,0.00050785945,0.0064763306,0.00150111],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039299593,0.000099561454,0.000023436993,0.00064960663,0.00017182462,0.0020266983,0.00010073069,0.00001330844,0.41077766,0.0000032889789,0.58575094,0.0003436709],"study_design_scores_gemma":[0.0015588789,0.00024254974,0.0000025456318,0.0006204342,0.00035068474,0.00011289548,0.00003278366,0.00004118531,0.47287676,0.000021446742,0.5233997,0.00074012147],"about_ca_topic_score_codex":0.000602087,"about_ca_topic_score_gemma":0.000006573279,"teacher_disagreement_score":0.38557038,"about_ca_system_score_codex":0.00069564086,"about_ca_system_score_gemma":0.00061952346,"threshold_uncertainty_score":0.99927634},"labels":[],"label_agreement":null},{"id":"W2908320633","doi":"10.1016/j.molcel.2018.12.011","title":"The Cell-Death-Associated Polymer PAR Feeds Forward α-Synuclein Toxicity in Parkinson’s Disease","year":2019,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Parkinson's Disease Mechanisms and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Azrieli Foundation","keywords":"Biology; Parkinson's disease; Disease; Alpha-synuclein; Toxicity; Programmed cell death; Genetics; Internal medicine; Apoptosis","score_opus":0.008920848612019921,"score_gpt":0.2203389742928337,"score_spread":0.21141812568081378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908320633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7214499,0.019117424,0.00022193587,0.22945419,0.0016110037,0.004788999,0.0010415007,0.00033641467,0.02197862],"genre_scores_gemma":[0.7439508,0.00040939,0.000067435205,0.23202369,0.00037254218,0.00026769997,0.0013551245,0.00027096205,0.021282358],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99572426,0.00036192973,0.00057112053,0.0010839019,0.0010621505,0.0011966224],"domain_scores_gemma":[0.99764395,0.00013521127,0.000356329,0.0013893893,0.00009530797,0.00037979428],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00024039128,0.00083907635,0.00091039133,0.00024245524,0.00020214911,0.00012160245,0.00046987773,0.00084304746,0.00017269877],"category_scores_gemma":[0.00006510083,0.0006402474,0.0007970963,0.00030756218,0.000074888005,0.00005393287,0.00018533158,0.0014326365,0.0006436051],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009406231,0.0027702425,0.033417307,0.0010145892,0.0012127992,0.046172068,0.00017470373,0.000019069592,0.014171158,0.000029463466,0.8985309,0.0015471072],"study_design_scores_gemma":[0.004423663,0.0002669331,0.007860165,0.00025567957,0.0013293561,0.0000055755004,0.000016440128,0.0001700573,0.03193269,0.00016140842,0.9528004,0.00077765883],"about_ca_topic_score_codex":0.00019202386,"about_ca_topic_score_gemma":0.000014185744,"teacher_disagreement_score":0.0542695,"about_ca_system_score_codex":0.00055119407,"about_ca_system_score_gemma":0.00044942476,"threshold_uncertainty_score":0.9996049},"labels":[],"label_agreement":null},{"id":"W2909524758","doi":"10.1016/j.molcel.2018.12.002","title":"RNA Polymerase II CTD Tyrosine 1 Is Required for Efficient Termination by the Nrd1-Nab3-Sen1 Pathway","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Compute Canada","keywords":"Biology; RNA polymerase II; CTD; RNA polymerase III; Molecular biology; Small nuclear RNA; Polymerase; Cell biology; Genetics; RNA-dependent RNA polymerase; Gene expression; Gene; Promoter","score_opus":0.005632953091990278,"score_gpt":0.22363777462498097,"score_spread":0.2180048215329907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909524758","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97863156,0.0036548784,0.011110312,0.0011877452,0.00020608873,0.0006565779,0.00014208522,0.000012847604,0.0043979194],"genre_scores_gemma":[0.9837121,0.000048335412,0.00020061874,0.0013309327,0.00007034632,0.000116603565,0.0003187536,0.00003429834,0.014168042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989904,0.000037783077,0.00018426483,0.00038956638,0.00015429857,0.00024365555],"domain_scores_gemma":[0.9991234,0.0000072148655,0.00010246044,0.0006161976,0.0000950243,0.000055686352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014136809,0.00015789962,0.00010731951,0.000025737183,0.00016057353,0.000035904206,0.00023802501,0.000119000724,0.000063939624],"category_scores_gemma":[0.000013755322,0.0001258806,0.00013795187,0.00008956676,0.000046975358,0.0000028367028,0.00007839169,0.000056783592,0.00003467896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035213834,0.000100908655,0.000013808995,0.00001630564,0.00001565692,5.9935087e-7,0.000060187303,0.00013635936,0.98334163,0.000112966634,0.011189157,0.0049771727],"study_design_scores_gemma":[0.000605196,0.00018524405,0.000034507993,0.000005336187,0.000016650658,0.0000017469519,0.000034415654,0.0007591923,0.82739323,0.000018584129,0.17079267,0.00015320122],"about_ca_topic_score_codex":0.000016322992,"about_ca_topic_score_gemma":0.0000010659694,"teacher_disagreement_score":0.15960352,"about_ca_system_score_codex":0.00002217784,"about_ca_system_score_gemma":0.00006255092,"threshold_uncertainty_score":0.51332617},"labels":[],"label_agreement":null},{"id":"W2911246008","doi":"10.1016/j.molcel.2018.12.010","title":"BRCA1 Haploinsufficiency Is Masked by RNF168-Mediated Chromatin Ubiquitylation","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Alex's Lemonade Stand Foundation for Childhood Cancer; Ellison Medical Foundation; U.S. Department of Defense","keywords":"Biology; Haploinsufficiency; Chromatin; Ubiquitin; Genetics; Cell biology; DNA; Phenotype; Gene","score_opus":0.00309312888647488,"score_gpt":0.19635423612784045,"score_spread":0.19326110724136558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911246008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9787932,0.0006041073,0.0068900175,0.00012293707,0.00017488022,0.0004204048,0.00003947837,0.00006075533,0.01289422],"genre_scores_gemma":[0.99250907,0.000034263096,0.0012012091,0.0012113659,0.000032956137,0.000019626948,0.000510885,0.000058444028,0.0044221636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984436,0.00007654151,0.00025171723,0.00057329703,0.00029163263,0.0003632256],"domain_scores_gemma":[0.99903804,0.000007633153,0.0001225432,0.00064828095,0.000071005044,0.00011250928],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016934167,0.0002321129,0.00017636074,0.000051301147,0.000046870562,0.000036326408,0.00029172024,0.00024917495,0.000390277],"category_scores_gemma":[0.00003265399,0.00024770875,0.00013684729,0.00015578851,0.000032831915,0.0000056121644,0.00014925317,0.000106868225,0.000762773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017155804,0.00012048891,0.00035697725,0.0000310035,0.00001851072,0.0000063354078,0.00004629131,0.00003679279,0.99417657,0.000030179648,0.0048958636,0.00026385763],"study_design_scores_gemma":[0.0007195749,0.00036446162,0.00013057097,0.000008420527,0.000014903482,0.000003911334,0.000031387077,0.0011755294,0.9594338,0.000055457913,0.037763484,0.00029849133],"about_ca_topic_score_codex":0.000017165974,"about_ca_topic_score_gemma":0.0000016398087,"teacher_disagreement_score":0.034742735,"about_ca_system_score_codex":0.00002618975,"about_ca_system_score_gemma":0.000064964006,"threshold_uncertainty_score":0.9999975},"labels":[],"label_agreement":null},{"id":"W2913385233","doi":"10.1016/j.molcel.2019.01.001","title":"Rad5 Recruits Error-Prone DNA Polymerases for Mutagenic Repair of ssDNA Gaps on Undamaged Templates","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Associazione Italiana per la Ricerca sul Cancro; Canadian Cancer Society","keywords":"Biology; DNA replication; Proliferating cell nuclear antigen; DNA polymerase; DNA; DNA repair; Cell biology; DNA synthesis; Genetics; Replication protein A; Eukaryotic DNA replication; Control of chromosome duplication; DNA damage; DNA-binding protein; Gene","score_opus":0.011689887726458579,"score_gpt":0.24604333291095112,"score_spread":0.23435344518449255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913385233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992434,0.0012265207,0.0008323111,0.000050757448,0.0002500618,0.000991126,0.00006121104,0.00006373719,0.0040902644],"genre_scores_gemma":[0.99088556,0.00003624584,0.0030988685,0.00037408533,0.000055373235,0.000070681206,0.0002456879,0.00008906514,0.0051444424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827963,0.000113546725,0.0003392636,0.0006499772,0.00022495081,0.0003926308],"domain_scores_gemma":[0.9986463,0.00003376552,0.0001830906,0.0009417048,0.00008970328,0.000105423256],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002526812,0.0002885246,0.00031088057,0.000089048044,0.00005339128,0.00001423865,0.00029715768,0.00024761766,0.00008200406],"category_scores_gemma":[0.00007967928,0.00029134564,0.00039936934,0.00011764412,0.00005597092,0.0000044636204,0.0001250757,0.000105854444,0.00005896877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023440579,0.00014903616,0.00017873125,0.00015315461,0.000095790034,0.000011996742,0.000032472686,0.00007616499,0.9977815,0.0002322822,0.0006840686,0.0003703773],"study_design_scores_gemma":[0.0012976214,0.0015065884,0.00012452711,0.00004163788,0.000055559412,0.0000061172277,0.00006876662,0.00013864545,0.9856325,0.000169705,0.010631678,0.00032664672],"about_ca_topic_score_codex":0.00001396792,"about_ca_topic_score_gemma":0.000003844161,"teacher_disagreement_score":0.012149013,"about_ca_system_score_codex":0.000020894046,"about_ca_system_score_gemma":0.000091688795,"threshold_uncertainty_score":0.99995387},"labels":[],"label_agreement":null},{"id":"W2932287678","doi":"10.1016/j.molcel.2019.02.003","title":"A Combined Approach Reveals a Regulatory Mechanism Coupling Src’s Kinase Activity, Localization, and Phosphotransferase-Independent Functions","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research","funders":"National Institute of General Medical Sciences; National Health and Medical Research Council; Canadian Institute for Advanced Research; National Institutes of Health; National Science Foundation","keywords":"Biology; Proto-oncogene tyrosine-protein kinase Src; Kinase; Protein kinase domain; Cell biology; Biochemistry; SH3 domain; Phosphorylation; Computational biology; Mutant; Gene","score_opus":0.005901689365378777,"score_gpt":0.199143859036544,"score_spread":0.19324216967116523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2932287678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7455628,0.00066404144,0.25207567,0.0000357434,0.00008019979,0.0005604686,0.00001199403,0.00003217974,0.0009769468],"genre_scores_gemma":[0.9974497,0.000040472813,0.0007840286,0.00029115303,0.000037115067,0.000036554284,0.00019274944,0.000052639843,0.0011156091],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856675,0.00006801608,0.00022011457,0.00059547095,0.00026909212,0.0002805859],"domain_scores_gemma":[0.99915767,0.0000063766233,0.00008729202,0.0004885321,0.00010512121,0.00015503312],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027423643,0.00024668497,0.00021374269,0.00007885553,0.0001391818,0.000054071315,0.000121930585,0.00023385067,0.00005569316],"category_scores_gemma":[0.000014086187,0.00026735855,0.00011554281,0.00014528657,0.000047170004,0.000009350196,0.00010020636,0.00013269218,0.00002067198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013371224,0.0001440864,0.00038613402,0.0001080571,0.000039543465,0.000009604392,0.000033366803,0.0047372305,0.99303705,0.0011374103,0.000082879975,0.0001509098],"study_design_scores_gemma":[0.0016631599,0.00027310356,0.0002940008,0.000030498752,0.000052141888,0.000011120469,0.00006971936,0.01789686,0.97783196,0.0004133753,0.0010761402,0.000387938],"about_ca_topic_score_codex":0.000018432556,"about_ca_topic_score_gemma":0.000002091878,"teacher_disagreement_score":0.2518869,"about_ca_system_score_codex":0.00002792786,"about_ca_system_score_gemma":0.00007361764,"threshold_uncertainty_score":0.9999779},"labels":[],"label_agreement":null},{"id":"W2934823619","doi":"10.1016/j.molcel.2019.03.003","title":"The Phospho-Code Determining Circadian Feedback Loop Closure and Output in Neurospora","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; National Institutes of Health","keywords":"Biology; Circadian rhythm; Circadian clock; Negative feedback; Neurospora; Phosphorylation; Bacterial circadian rhythms; Cell biology; Genetics; Transcription factor; Transcription (linguistics); Gene; Neurospora crassa; Neuroscience; Mutant","score_opus":0.010926517684791063,"score_gpt":0.213168661123296,"score_spread":0.20224214343850494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2934823619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9855823,0.0010115821,0.000025313071,0.00027985102,0.0003731276,0.00033133605,0.0000053501403,0.00003562069,0.0123555465],"genre_scores_gemma":[0.9944358,0.00013176561,0.000032413238,0.001479769,0.000020905507,0.000009839459,8.8365084e-7,0.000041825726,0.003846823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984462,0.000103837556,0.00021916628,0.0005320433,0.00021851936,0.0004801977],"domain_scores_gemma":[0.99917245,0.00013021585,0.00007378167,0.0004655607,0.00001208891,0.00014592393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017833777,0.00018478715,0.00017142824,0.00007037308,0.000119798286,0.00013511954,0.00026172888,0.00009874637,0.000014087825],"category_scores_gemma":[0.00008721481,0.00015974785,0.000068480964,0.0002552432,0.00010392446,0.00009275223,0.000096619275,0.00031636344,0.0003168022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060882117,0.000084208485,0.14881568,0.00007451711,0.000004258478,0.0017700202,0.0015087066,0.00028000603,0.82659364,0.004749164,0.0002620635,0.01579686],"study_design_scores_gemma":[0.0012514105,0.000096725555,0.03560747,0.000035094028,0.000009399625,0.000079784884,0.00012230336,0.0015628855,0.9165426,0.00017975942,0.044144873,0.00036771572],"about_ca_topic_score_codex":0.00001602952,"about_ca_topic_score_gemma":0.000012785026,"teacher_disagreement_score":0.113208205,"about_ca_system_score_codex":0.000025922584,"about_ca_system_score_gemma":0.0000535582,"threshold_uncertainty_score":0.6514329},"labels":[],"label_agreement":null},{"id":"W2939394455","doi":"10.1016/j.molcel.2019.04.007","title":"Unveiling the Mutational Mechanism of the Bacterial Genotoxin Colibactin in Colorectal Cancer","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Genetics; DNA; DNA damage; Microbiome; Escherichia coli; Gene","score_opus":0.0037106863310855326,"score_gpt":0.21829581807186177,"score_spread":0.21458513174077623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939394455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978528,0.00020364487,0.00008490814,0.00019721972,0.00031657476,0.0003977545,0.000024133598,0.0000021949884,0.00092079205],"genre_scores_gemma":[0.99911755,0.000019959865,0.00009657848,0.0003561484,0.000048893817,0.000019518076,0.000028590759,0.000015017302,0.00029772922],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929017,0.000097189295,0.0001612514,0.00018458083,0.0000945048,0.00017233157],"domain_scores_gemma":[0.99965996,0.00000929167,0.00008948582,0.00018197828,0.00003683013,0.000022434002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013751775,0.00009117643,0.00009592064,0.000016878374,0.00003897697,0.000009031672,0.00020359468,0.00009804171,0.00013493285],"category_scores_gemma":[0.000010082032,0.00006225098,0.000075330674,0.00008582601,0.00003638902,0.0000014336774,0.00009100454,0.000101242375,0.000012682782],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005386151,0.000030539817,0.0007711505,0.000020561007,0.000009561741,0.000001230514,0.000103262166,0.00024979073,0.9983964,0.00023451126,0.000085342224,0.000043802298],"study_design_scores_gemma":[0.0005279586,0.00006117821,0.0055607203,0.000010205095,0.000007028021,0.0000033385159,0.00005727797,0.000079296995,0.9909516,0.000059789523,0.0026033658,0.00007825493],"about_ca_topic_score_codex":0.000114703835,"about_ca_topic_score_gemma":0.00016283493,"teacher_disagreement_score":0.0074448003,"about_ca_system_score_codex":0.000021917389,"about_ca_system_score_gemma":0.0002227799,"threshold_uncertainty_score":0.25385213},"labels":[],"label_agreement":null},{"id":"W2944544356","doi":"10.1016/j.molcel.2019.04.019","title":"The Cardiac Ryanodine Receptor Phosphorylation Hotspot Embraces PKA in a Phosphorylation-Dependent Manner","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; RYR-1 Foundation; Canadian Light Source","keywords":"Ryanodine receptor; Phosphorylation; Biology; Ryanodine receptor 2; Protein kinase A; Calmodulin; Cell biology; Protein subunit; Intracellular; Kinase; Biochemistry; Biophysics; Enzyme","score_opus":0.004282610333232761,"score_gpt":0.20143649212365317,"score_spread":0.1971538817904204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944544356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870549,0.0021498234,0.0009975139,0.00035098701,0.0013944301,0.00051054306,0.000009169575,0.00002023291,0.0075124144],"genre_scores_gemma":[0.98496145,0.00028279025,0.00014473443,0.00018455656,0.00015375772,0.000046028294,0.0002538762,0.000034927896,0.013937872],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870235,0.000109109176,0.00026334604,0.00039804747,0.0002622132,0.00026492635],"domain_scores_gemma":[0.9992978,0.00001768921,0.00011247634,0.0004116643,0.00009958194,0.000060773298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003447224,0.00018135484,0.00013755467,0.000057948306,0.000104618135,0.000058200767,0.00016250748,0.00018294451,0.00012411551],"category_scores_gemma":[0.000032401902,0.00015260324,0.00012746901,0.0001679188,0.000034971643,0.000009016895,0.00007068075,0.00012237956,0.00027546112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025288571,0.00006687879,0.007344003,0.00001737142,0.000032495376,0.0000021685498,0.00010358782,0.0052764677,0.98097664,0.00030369914,0.0027971377,0.0028266802],"study_design_scores_gemma":[0.0009180729,0.00015331966,0.0047149365,0.000011396414,0.000012895016,0.0000011606701,0.00021565171,0.0013740263,0.8263086,0.00008546199,0.16590288,0.00030160716],"about_ca_topic_score_codex":0.000024429086,"about_ca_topic_score_gemma":0.00001274829,"teacher_disagreement_score":0.16310576,"about_ca_system_score_codex":0.00004533666,"about_ca_system_score_gemma":0.000051581508,"threshold_uncertainty_score":0.62229794},"labels":[],"label_agreement":null},{"id":"W2945769997","doi":"10.1016/j.molcel.2019.04.032","title":"When Degradation Elicits the Alarm: N-Terminal Degradation of NLRP1B Unleashes Its Inflammasome Activity","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Inflammasome; Pyrin domain; Biology; Innate immune system; Degradation (telecommunications); AIM2; Cell biology; Mechanism (biology); Terminal (telecommunication); Immune system; Immunology; Inflammation","score_opus":0.006434004226881281,"score_gpt":0.21207008518036277,"score_spread":0.2056360809534815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945769997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920704,0.0008237746,0.0014887257,0.00022674655,0.00013160714,0.0004158415,0.000008353049,0.000010940766,0.004823655],"genre_scores_gemma":[0.9956071,0.000120076234,0.00016584036,0.0001752554,0.00003637852,0.000021037595,0.00017290539,0.000030060726,0.0036713565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883044,0.00013134496,0.000235572,0.00031427134,0.00023243466,0.00025591935],"domain_scores_gemma":[0.9990881,0.000013183866,0.00019251519,0.0005319989,0.00013641069,0.0000377895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020580212,0.0001992853,0.00016728273,0.000055050703,0.000067042725,0.000028090943,0.0003094624,0.00015866593,0.000060444305],"category_scores_gemma":[0.000041785053,0.00016654389,0.00015531099,0.00010992247,0.00005323589,0.000017788065,0.000120110744,0.00012636824,0.00007532172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008594391,0.00005997382,0.0015617363,0.000050977305,0.000039701565,0.0000030870135,0.00006666421,0.00015399951,0.9932746,0.00009835718,0.00025034565,0.004354612],"study_design_scores_gemma":[0.00060021674,0.00020994972,0.0028099043,0.000013668068,0.000036503083,0.000005328505,0.00007753389,0.00025600323,0.98112655,0.00004529797,0.01461263,0.00020639351],"about_ca_topic_score_codex":0.0000278908,"about_ca_topic_score_gemma":0.0000122377805,"teacher_disagreement_score":0.014362284,"about_ca_system_score_codex":0.000013366748,"about_ca_system_score_gemma":0.00008006668,"threshold_uncertainty_score":0.67914623},"labels":[],"label_agreement":null},{"id":"W2950751886","doi":"10.1016/j.molcel.2018.10.010","title":"Spatial Organization of Single mRNPs at Different Stages of the Gene Expression Pathway","year":2018,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":157,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Université de Montréal","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Ribonucleoprotein; Messenger RNP; Biology; Messenger RNA; Translation (biology); Ribosome; Cell biology; Gene expression; Gene; Protein biosynthesis; Genetics; RNA","score_opus":0.006752091198490567,"score_gpt":0.21100840895726422,"score_spread":0.20425631775877365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950751886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902941,0.00013557656,0.008912487,0.000022900696,0.000057555906,0.00011757795,0.000012553204,0.0000029825374,0.00044429666],"genre_scores_gemma":[0.9987031,0.000016901888,0.00021596732,0.000032228734,0.000050398598,0.0000018291399,0.000041392053,0.000017597567,0.0009205464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992951,0.00007449986,0.00014068116,0.00016565675,0.00018754705,0.00013647876],"domain_scores_gemma":[0.99935216,0.000004172018,0.0000956357,0.00035818826,0.0001494796,0.000040390314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000049239326,0.000082849845,0.00008999886,0.000019175292,0.000056382596,0.0000054458637,0.00018271289,0.000073599556,0.000047237023],"category_scores_gemma":[0.00005917214,0.00005708711,0.000055555658,0.000073557625,0.00009529132,0.0000012701762,0.00027734245,0.000033070733,0.0000027277192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023705301,0.00007660578,0.010588325,0.00002219493,0.000007846688,0.0000010097283,0.000033861215,0.000012502989,0.9888127,0.0000037404625,0.00012421039,0.00029332362],"study_design_scores_gemma":[0.00026555732,0.00024109455,0.0026585697,0.000013948155,0.0000051912307,9.1418747e-7,0.00001114562,0.000019001498,0.9962758,0.0000056918307,0.0004416669,0.00006146019],"about_ca_topic_score_codex":0.000023405386,"about_ca_topic_score_gemma":0.000017207356,"teacher_disagreement_score":0.00869652,"about_ca_system_score_codex":0.000012370639,"about_ca_system_score_gemma":0.000023840312,"threshold_uncertainty_score":0.23279448},"labels":[],"label_agreement":null},{"id":"W2951350919","doi":"10.1016/j.molcel.2019.05.019","title":"HCF-1 Regulates De Novo Lipogenesis through a Nutrient-Sensitive Complex with ChREBP","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; U.S. National Library of Medicine; Terry Fox Foundation; Canada Foundation for Innovation; National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; McGill University","keywords":"Carbohydrate-responsive element-binding protein; Biology; Lipogenesis; Promoter; Transcription factor; Demethylase; Cell biology; Epigenetics; Gene; Gene expression; Biochemistry","score_opus":0.008814186993874321,"score_gpt":0.22327275782140216,"score_spread":0.21445857082752784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951350919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9787713,0.0004916927,0.0018960504,0.0005835068,0.00010073479,0.0005237033,0.00000872093,0.00007332297,0.01755093],"genre_scores_gemma":[0.9887773,0.000034468114,0.0051919855,0.0027906003,0.00014505202,0.000011806736,0.00005084058,0.000057924357,0.0029400657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869084,0.00005595676,0.00017804687,0.0003860204,0.0002992803,0.00038983874],"domain_scores_gemma":[0.9991324,0.000022861128,0.00007321414,0.0005097939,0.00010876903,0.00015298244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000087162385,0.00022673326,0.00039349755,0.00006263188,0.00004172001,0.000023838122,0.000087444125,0.0001016715,0.00017806957],"category_scores_gemma":[0.000009133419,0.0001802866,0.00013225935,0.0002266675,0.00007308982,0.000053469932,0.000051705556,0.00015389311,0.00029446027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004360642,0.00027346375,0.0040953686,0.0001588755,0.0001059218,0.00042484846,0.0012135009,0.000057722635,0.9918354,0.00039204044,0.00041229837,0.0005944516],"study_design_scores_gemma":[0.005536675,0.00042444438,0.02530734,0.00013493834,0.00030544843,0.00032513382,0.0003394937,0.00027739015,0.86999625,0.00009926712,0.09692142,0.00033219872],"about_ca_topic_score_codex":0.000060369024,"about_ca_topic_score_gemma":0.0000035651296,"teacher_disagreement_score":0.121839195,"about_ca_system_score_codex":0.00004749766,"about_ca_system_score_gemma":0.00008574173,"threshold_uncertainty_score":0.7351874},"labels":[],"label_agreement":null},{"id":"W2952436256","doi":"10.1016/j.molcel.2019.04.008","title":"Crosstalk between RNA Pol II C-Terminal Domain Acetylation and Phosphorylation via RPRD Proteins","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"National Institute of General Medical Sciences; National Institute on Drug Abuse; National Cancer Institute; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; James B. Pendleton Charitable Trust; University of California, San Francisco; American Society for Microbiology","keywords":"RNA polymerase II; Biology; Acetylation; Phosphorylation; Cell biology; Transcription (linguistics); Crosstalk; Heptad repeat; CTD; Transcription factor II F; Molecular biology; Biochemistry; RNA; RNA polymerase; Peptide sequence; Gene; Gene expression; Promoter","score_opus":0.0048706086174124625,"score_gpt":0.2342249921908012,"score_spread":0.22935438357338875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952436256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98275834,0.00042895263,0.01402334,0.00010112282,0.000030589334,0.000514354,0.000008621751,0.000011631396,0.0021230665],"genre_scores_gemma":[0.9950518,0.000018739962,0.0014882315,0.00007915262,0.00007390993,0.000018631708,0.0001444809,0.000027237698,0.0030978322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891937,0.000057361118,0.00016094527,0.00035972297,0.00020438,0.00029824206],"domain_scores_gemma":[0.9994594,0.000005130153,0.000067547604,0.0002983016,0.000050636943,0.00011897276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018737244,0.00014907651,0.00012887786,0.000046360383,0.00012938326,0.000047179437,0.00011913031,0.00015231232,0.00003106948],"category_scores_gemma":[0.000012986146,0.00014948413,0.000065757544,0.00007600758,0.000050477298,0.000008494267,0.0001623969,0.00011636696,0.000030476496],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052072748,0.000023177738,0.004770858,0.00003201786,0.000016893611,0.00000993694,0.000045896013,0.000022396836,0.9907168,0.000018445176,0.000046704983,0.0042448128],"study_design_scores_gemma":[0.0007989312,0.00051244104,0.0047649904,0.000012008313,0.000009509698,0.0000062051763,0.000024973908,0.00024207945,0.98822945,0.00015166005,0.0050489777,0.00019876217],"about_ca_topic_score_codex":0.00004928802,"about_ca_topic_score_gemma":0.000005715662,"teacher_disagreement_score":0.012535109,"about_ca_system_score_codex":0.000019050101,"about_ca_system_score_gemma":0.000044856642,"threshold_uncertainty_score":0.60957855},"labels":[],"label_agreement":null},{"id":"W2954333568","doi":"10.1016/j.molcel.2019.05.033","title":"Oncogenic Biogenesis of pri-miR-17∼92 Reveals Hierarchy and Competition among Polycistronic MicroRNAs","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Terry Fox Research Institute; Canada Foundation for Innovation","keywords":"Biology; microRNA; Biogenesis; Hierarchy; Competition (biology); Messenger RNA; Cell biology; Genetics; Computational biology; Gene; Ecology","score_opus":0.0034312897459337246,"score_gpt":0.1995933754955672,"score_spread":0.19616208574963345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954333568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929799,0.003795834,0.0012563688,0.00003206548,0.000060294555,0.00039580872,0.000054448265,0.000011335045,0.0014139488],"genre_scores_gemma":[0.9972747,0.00010227458,0.0010581246,0.00008791042,0.000036512112,0.0000081781,0.00035155707,0.00003816575,0.0010425551],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987952,0.00009632519,0.00027958502,0.00042346364,0.00015577165,0.0002496663],"domain_scores_gemma":[0.9991221,0.000007841582,0.0001837605,0.00050497067,0.00007795533,0.000103384955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013656747,0.00019090179,0.00020350689,0.000078344536,0.000034139237,0.000017276525,0.00016363901,0.00017296367,0.00008785697],"category_scores_gemma":[0.000011799375,0.00020883727,0.00015166705,0.00010770849,0.000115915995,0.0000053137974,0.00013466003,0.00006223601,0.0000309924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057433906,0.00006269411,0.009825692,0.000106388376,0.00005186377,0.0000035767919,0.000015949578,0.000054643773,0.98934674,0.00008385587,0.00020079393,0.00019035283],"study_design_scores_gemma":[0.00074387796,0.00016029122,0.016984101,0.00003233974,0.000053522697,0.000007946148,0.000019074307,0.000029750865,0.9764198,0.00009926709,0.0052235588,0.0002264839],"about_ca_topic_score_codex":0.00002464677,"about_ca_topic_score_gemma":0.0000044070466,"teacher_disagreement_score":0.012926969,"about_ca_system_score_codex":0.000027558235,"about_ca_system_score_gemma":0.000066018576,"threshold_uncertainty_score":0.8516137},"labels":[],"label_agreement":null},{"id":"W2956721657","doi":"10.1016/j.molcel.2019.06.021","title":"Translating Material Science into Biological Function","year":2019,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Biology; Function (biology); Computational biology; Evolutionary biology","score_opus":0.01168461545142561,"score_gpt":0.24601867778968067,"score_spread":0.23433406233825507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2956721657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90687543,0.000925113,0.013074575,0.065096594,0.001533841,0.0009105894,0.0000513319,0.000059733633,0.011472797],"genre_scores_gemma":[0.75883865,0.000052588228,0.0015349068,0.22897318,0.0027505565,0.000050048446,0.0018268711,0.00011596819,0.0058572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99774396,0.00013928107,0.00022309955,0.0008247488,0.00043295958,0.00063595484],"domain_scores_gemma":[0.9991447,0.000009755848,0.000088281355,0.0005824253,0.0001044009,0.00007043366],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004243088,0.00028328644,0.00022528527,0.00012473759,0.00014479527,0.00012695265,0.00054528925,0.0007298507,0.000075108685],"category_scores_gemma":[0.00006431865,0.0002496244,0.00016881345,0.00015734443,0.00024947006,0.0000044553526,0.00021056052,0.0006011092,0.00009301225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043409564,0.000010345746,0.000034243505,0.000072681585,0.000015711177,0.000075927936,0.0000067848673,0.000011652488,0.947662,0.0000044510207,0.050640922,0.0014218526],"study_design_scores_gemma":[0.00023334532,0.00039747517,0.000013641027,0.0000132989935,0.000013023431,0.0000070564192,0.000007074187,0.000059318518,0.5244835,0.000034246747,0.47443825,0.00029975353],"about_ca_topic_score_codex":0.00003315782,"about_ca_topic_score_gemma":0.0000016354942,"teacher_disagreement_score":0.42379734,"about_ca_system_score_codex":0.000036908576,"about_ca_system_score_gemma":0.00026210945,"threshold_uncertainty_score":0.9999956},"labels":[],"label_agreement":null},{"id":"W2960110396","doi":"10.1016/j.molcel.2019.06.001","title":"Nuclear TARBP2 Drives Oncogenic Dysregulation of RNA Splicing and Decay","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre; McGill Genome Centre","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; Damon Runyon Cancer Research Foundation; Howard Hughes Medical Institute","keywords":"Biology; RNA splicing; Intron; RNA; Cell biology; RNA-binding protein; Gene expression; Regulation of gene expression; Gene; Alternative splicing; Messenger RNA; Regulator; Genetics","score_opus":0.0031380302748142963,"score_gpt":0.20068543349139,"score_spread":0.1975474032165757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2960110396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99095565,0.0010938236,0.0014374591,0.00004063341,0.000043013442,0.0001262849,0.0000032647022,0.0000050748517,0.006294799],"genre_scores_gemma":[0.99834937,0.00012416033,0.0007496605,0.00008883027,0.000022614566,0.000003341912,0.000028030465,0.000019649013,0.00061434234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999458,0.000022951532,0.00012216068,0.00021516412,0.00007773416,0.00010400163],"domain_scores_gemma":[0.9995619,0.0000026448588,0.00006939047,0.00028883305,0.000040488972,0.000036741483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055978122,0.00008168895,0.00008919797,0.000028412771,0.000025447322,0.000010607053,0.00008282465,0.0000757554,0.000036530964],"category_scores_gemma":[0.0000031267696,0.00008274799,0.000053507218,0.000050270854,0.00003518813,0.000002868635,0.000050541887,0.000035198434,0.000013896471],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014427445,0.000019536777,0.0008060718,0.000020778794,0.000014990758,5.894112e-7,0.00003862002,0.00022158447,0.9962939,0.00038360426,0.000058084177,0.0021278043],"study_design_scores_gemma":[0.00033458706,0.00011027143,0.0030665414,0.000008785471,0.000016679589,0.0000019683075,0.000045978704,0.00038573635,0.98437804,0.0000417897,0.011498725,0.00011087111],"about_ca_topic_score_codex":0.000015100789,"about_ca_topic_score_gemma":0.0000015802744,"teacher_disagreement_score":0.011915842,"about_ca_system_score_codex":0.000006674615,"about_ca_system_score_gemma":0.000019225708,"threshold_uncertainty_score":0.3374365},"labels":[],"label_agreement":null},{"id":"W2963929100","doi":"10.1016/j.molcel.2019.07.003","title":"Break Check: Transcription-Driven Topoisomerase II Collisions near Chromatin Loop Anchors Are Hotspots for DNA Damage and Translocations","year":2019,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Cancer therapeutics and mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation","funders":"Canada Research Chairs","keywords":"Biology; Chromatin; Topoisomerase; Chromosomal translocation; DNA damage; Transcription (linguistics); DNA; Genetics; Cell biology; Computational biology; Gene","score_opus":0.010609525980035095,"score_gpt":0.23031817567451882,"score_spread":0.21970864969448373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2963929100","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7534615,0.008012477,0.037135832,0.18938628,0.0015228271,0.004954242,0.0044928496,0.000091341004,0.0009426954],"genre_scores_gemma":[0.44375128,0.0018559777,0.0077086147,0.5106582,0.0021983804,0.0011184226,0.011828367,0.00065635255,0.02022439],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980284,0.0000734353,0.00034941497,0.0008295999,0.00023148497,0.00048764315],"domain_scores_gemma":[0.9987606,0.000018507271,0.00019534973,0.0007695651,0.00014992403,0.00010609704],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009838952,0.00048271197,0.00043887238,0.00009439675,0.00030347475,0.00009860191,0.00034130266,0.0008972911,0.000044174645],"category_scores_gemma":[0.000009155413,0.00052053516,0.00035778226,0.00012772738,0.000108892666,0.0000066233883,0.000065093256,0.00042746458,0.000009468011],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040469688,0.000078833065,0.0000053208178,0.000327423,0.00013674046,0.000028306216,0.00013929716,0.000111730136,0.8963188,0.000019328827,0.10246859,0.0003251636],"study_design_scores_gemma":[0.0013021675,0.00042272516,0.000029272074,0.00007381971,0.00024033812,0.000009662078,0.000047438883,0.00040087302,0.29774278,0.0000618129,0.69911647,0.00055261655],"about_ca_topic_score_codex":0.000030673353,"about_ca_topic_score_gemma":0.000037357688,"teacher_disagreement_score":0.598576,"about_ca_system_score_codex":0.00003782224,"about_ca_system_score_gemma":0.00022892372,"threshold_uncertainty_score":0.9997246},"labels":[],"label_agreement":null},{"id":"W2969469813","doi":"10.1016/j.molcel.2019.07.005","title":"Regulation of Co-transcriptional Pre-mRNA Splicing by m6A through the Low-Complexity Protein hnRNPG","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":377,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Human Genome Research Institute; National Institutes of Health; University of Chicago; National Institute of General Medical Sciences; Center for Outcomes Research and Evaluation, Yale School of Medicine","keywords":"RNA splicing; Biology; RNA polymerase II; Alternative splicing; Ribonucleoprotein; Exon; Cell biology; Messenger RNA; RNA-binding protein; SR protein; RNA; Heterogeneous nuclear ribonucleoprotein; Precursor mRNA; Protein splicing; Genetics; Gene expression; Gene; Promoter","score_opus":0.009647741907729938,"score_gpt":0.24017058710955444,"score_spread":0.2305228452018245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969469813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9659279,0.0009544133,0.024196938,0.0002228835,0.000050088027,0.00052429613,0.000042935913,0.000007589514,0.00807298],"genre_scores_gemma":[0.9956381,0.000027459688,0.0007287049,0.00020778632,0.000039791303,0.00004464366,0.00026471278,0.000020202346,0.0030286466],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910617,0.00006558191,0.00020234536,0.00027632862,0.0001923859,0.00015721074],"domain_scores_gemma":[0.9992858,0.0000034169548,0.000113475224,0.0004949996,0.000075752534,0.000026524207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011092074,0.00012034143,0.000104921346,0.000013140667,0.00006462963,0.000017317623,0.00020856319,0.00009643742,0.00012753658],"category_scores_gemma":[0.000005318573,0.000099297635,0.00010270008,0.00007339574,0.00009653176,0.000006095243,0.000027899092,0.000078945945,0.000021406368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041374227,0.00006193186,0.00015618102,0.00004474172,0.000016292357,1.7942203e-7,0.000057538044,0.0004670929,0.99629444,0.0015767947,0.0010876362,0.00019578444],"study_design_scores_gemma":[0.00037036286,0.00008372032,0.0018583785,0.000014809878,0.000011834242,0.0000011788608,0.000032112985,0.0001601974,0.9619318,0.0005302491,0.034881957,0.00012337856],"about_ca_topic_score_codex":0.000075803364,"about_ca_topic_score_gemma":0.0000043306527,"teacher_disagreement_score":0.034362633,"about_ca_system_score_codex":0.00001498444,"about_ca_system_score_gemma":0.000049257036,"threshold_uncertainty_score":0.40492398},"labels":[],"label_agreement":null},{"id":"W2971821708","doi":"10.1016/j.molcel.2019.07.038","title":"Decreased Enhancer-Promoter Proximity Accompanying Enhancer Activation","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":359,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Medical Research Council","keywords":"Enhancer; Biology; Enhancer RNAs; Cell biology; Promoter activity; Computational biology; Genetics; Transcription factor; Promoter; Gene; Gene expression","score_opus":0.0042733107091981245,"score_gpt":0.2080018998472716,"score_spread":0.20372858913807348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971821708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9792207,0.00013613736,0.013447127,0.00005960279,0.00013308611,0.00037333657,0.000005332237,0.000018139172,0.006606568],"genre_scores_gemma":[0.9956852,0.000024453548,0.0027273542,0.00023450064,0.00006980545,0.000027217598,0.00017612145,0.00004367675,0.0010116526],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988976,0.000044877448,0.00018914185,0.0004380702,0.00014870561,0.00028159836],"domain_scores_gemma":[0.99921465,0.0000050789645,0.00010997761,0.00052111916,0.00007028491,0.000078911384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001067614,0.00019338631,0.00014839903,0.000034784855,0.00005039494,0.000042987387,0.00022569626,0.00016408181,0.000113811366],"category_scores_gemma":[0.000014222608,0.00020015324,0.00011829098,0.00007407155,0.00002314145,0.000007480366,0.00012527342,0.00010724673,0.00011775214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031695457,0.000094362695,0.00041977514,0.00004420071,0.000023431463,0.0000018772087,0.000027163027,0.00023638314,0.9975967,0.000024767898,0.000103257524,0.0013964137],"study_design_scores_gemma":[0.0007186385,0.00008913671,0.00065374677,0.000014979752,0.000012707499,0.0000021085539,0.00002699453,0.0010903408,0.99278134,0.00013648858,0.0042109136,0.00026259996],"about_ca_topic_score_codex":0.000012520688,"about_ca_topic_score_gemma":0.000004255041,"teacher_disagreement_score":0.016464548,"about_ca_system_score_codex":0.000033578053,"about_ca_system_score_gemma":0.00007709052,"threshold_uncertainty_score":0.8162012},"labels":[],"label_agreement":null},{"id":"W2975852908","doi":"10.1016/j.molcel.2019.08.028","title":"Metabolic Diversity in Human Non-Small Cell Lung Cancer Cells","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":231,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Genentech; Sierra Oncology; Bayer Fund; Howard Hughes Medical Institute; Cancer Prevention and Research Institute of Texas; Exelixis; GlaxoSmithKline; Takeda Pharmaceuticals U.S.A.; Spectrum Pharmaceuticals; Pfizer; Welch Foundation; AstraZeneca; American Association for Cancer Research; Boehringer Ingelheim","keywords":"Biology; Signal transduction; Cell; Cancer cell; Cell culture; Reprogramming; Lung cancer; Gene; Gene expression; Metabolic pathway; Cell biology; Computational biology; Cancer; Cell metabolism; Cell type; Cancer research; Genetics; Internal medicine","score_opus":0.006149663453332328,"score_gpt":0.22150311456421248,"score_spread":0.21535345111088017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2975852908","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9707105,0.013264841,0.00046859693,0.000021057285,0.0010938011,0.00050302636,0.00002802082,0.000013464555,0.013896674],"genre_scores_gemma":[0.99040705,0.0013446328,0.000260525,0.00058691145,0.00036597397,0.000032891498,0.000060505652,0.00004966727,0.0068918355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837065,0.000073280586,0.00022926995,0.00063016656,0.0001971945,0.0004994409],"domain_scores_gemma":[0.9990781,0.0000041212256,0.000106874955,0.0006041186,0.00006379617,0.00014301213],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015987748,0.00028286153,0.0003245529,0.0001039446,0.00009539901,0.000027646736,0.00042478554,0.00023041197,0.0001787209],"category_scores_gemma":[0.000002874019,0.0003100245,0.00022027275,0.00017070159,0.000039745508,0.0000057418165,0.00054144626,0.00020047568,0.00005751127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025224002,0.00011098705,0.009324758,0.00008314453,0.000029099207,0.000008377498,0.00016003105,0.00069351046,0.9872742,0.000018195366,0.0019971759,0.00027528315],"study_design_scores_gemma":[0.0015812368,0.000051078892,0.0031250059,0.000012285896,0.00007664607,7.031805e-7,0.00004489398,0.000072901115,0.89615893,0.000011770724,0.09849016,0.00037435818],"about_ca_topic_score_codex":0.0009223026,"about_ca_topic_score_gemma":0.00020407759,"teacher_disagreement_score":0.09649299,"about_ca_system_score_codex":0.000028176046,"about_ca_system_score_gemma":0.000111303525,"threshold_uncertainty_score":0.9999352},"labels":[],"label_agreement":null},{"id":"W2978726884","doi":"10.1016/j.molcel.2019.09.012","title":"Cas9 Allosteric Inhibition by the Anti-CRISPR Protein AcrIIA6","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de Recherche du Québec - Santé; French Infrastructure for Integrated Structural Biology; National Institutes of Health; Agence Nationale de la Recherche","keywords":"CRISPR; Biology; Allosteric regulation; Cas9; DNA; Computational biology; Gene; Genetics; Receptor","score_opus":0.002630197039431335,"score_gpt":0.22571061009440446,"score_spread":0.22308041305497311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978726884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9783864,0.0017369669,0.015188308,0.00023645273,0.0001120654,0.0004478261,0.000011106417,0.000016510507,0.0038643517],"genre_scores_gemma":[0.9965669,0.00003031119,0.0003188223,0.00043169426,0.00005163206,0.000031421492,0.00011288083,0.00003560963,0.002420747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991291,0.00004251876,0.0001376577,0.0003033074,0.0001369664,0.0002504331],"domain_scores_gemma":[0.999431,0.0000029610787,0.000037713773,0.00044270445,0.000032577427,0.000053000513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097979784,0.00015981232,0.00010114808,0.000019483754,0.000042207947,0.00003295474,0.00015108511,0.00010777282,0.000045732962],"category_scores_gemma":[0.000009116102,0.00013198619,0.000089144814,0.000078801735,0.000026819696,0.0000023447926,0.00010888472,0.0001015619,0.00010717391],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008117653,0.000027596798,0.00010017523,0.000027580703,0.000013724688,0.000008144118,0.000023891294,0.00028463337,0.9967846,0.0000142531,0.002288188,0.00041904638],"study_design_scores_gemma":[0.00035419577,0.00012434451,0.00008115103,0.000008780713,0.000010535719,0.000013831105,0.00003905736,0.0001112383,0.9392053,0.000016230199,0.059855856,0.0001794855],"about_ca_topic_score_codex":0.000013450214,"about_ca_topic_score_gemma":0.000002445448,"teacher_disagreement_score":0.057579357,"about_ca_system_score_codex":0.000008246936,"about_ca_system_score_gemma":0.000024156927,"threshold_uncertainty_score":0.5382241},"labels":[],"label_agreement":null},{"id":"W2980567099","doi":"10.1016/j.molcel.2019.09.014","title":"Properties of Stress Granule and P-Body Proteomes","year":2019,"lang":"en","type":"review","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":477,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; Sinai Health System; Lunenfeld-Tanenbaum Research Institute","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Proteome; Stress granule; Granule (geology); Computational biology; Cell biology; Bioinformatics; Genetics; Gene","score_opus":0.024997057569205346,"score_gpt":0.28245133728720995,"score_spread":0.2574542797180046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980567099","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011247386,0.9867917,0.00008096252,0.00000395155,0.000031468837,0.00096773315,0.00003551958,0.0000049656537,0.00083631277],"genre_scores_gemma":[0.003448048,0.9928644,0.00008970747,0.000011565065,0.00003876575,0.00008266191,0.00011114069,0.000055999502,0.003297751],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987123,0.0001290343,0.00028332908,0.0004155999,0.00018663504,0.0002730741],"domain_scores_gemma":[0.9992001,0.0000046205196,0.0001529034,0.0004976279,0.000062479594,0.0000822688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012518189,0.00027391087,0.0006756244,0.00007723812,0.000029523684,0.000027021006,0.00026845426,0.00026249723,0.000010434173],"category_scores_gemma":[0.000032884323,0.00020630135,0.00024459977,0.000071001086,0.000093085706,0.0000017544114,0.00024744216,0.00016613766,0.000019804913],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023805545,0.000116544135,0.000020776526,0.07145828,0.0002538217,0.000032599084,0.000017121614,0.000002866568,0.6985359,0.000026074867,0.00023875809,0.22927345],"study_design_scores_gemma":[0.00025600355,0.0002779912,9.058051e-7,0.0030187962,0.00017380249,0.000009737171,0.000012336819,0.0000073366996,0.28914854,0.0000025719755,0.7067488,0.00034321845],"about_ca_topic_score_codex":0.000021826378,"about_ca_topic_score_gemma":0.0000011550202,"teacher_disagreement_score":0.70651,"about_ca_system_score_codex":0.000008032352,"about_ca_system_score_gemma":0.00018525371,"threshold_uncertainty_score":0.8412725},"labels":[],"label_agreement":null},{"id":"W2980949872","doi":"10.1016/j.molcel.2019.09.017","title":"Alternative Splicing Regulatory Networks: Functions, Mechanisms, and Evolution","year":2019,"lang":"en","type":"review","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":819,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Medical Research Council; Canadian Institutes of Health Research; Canada First Research Excellence Fund; European Research Council; Cancer Research UK; Wellcome Trust; Simons Foundation","keywords":"Biology; RNA splicing; Alternative splicing; Computational biology; Context (archaeology); Genetics; RNA-binding protein; RNA; Gene; splice; Exon","score_opus":0.015269924631120238,"score_gpt":0.2718626628350002,"score_spread":0.25659273820387996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980949872","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026484425,0.88234735,0.11553391,0.0000037813209,0.00021507715,0.00059929193,0.000016802313,0.000014454099,0.001004516],"genre_scores_gemma":[0.001561163,0.9911947,0.00047643128,0.00005930344,0.00021523777,0.00006544118,0.00042849587,0.00009891194,0.0059002643],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99804246,0.0002317157,0.00032270217,0.00073620566,0.00023487284,0.00043204616],"domain_scores_gemma":[0.9989015,0.00001846961,0.0002056175,0.0006505758,0.00006921756,0.00015465905],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029768783,0.00039437966,0.00063046796,0.0001364027,0.00010534801,0.00005643869,0.0002577108,0.0004404259,0.000010560807],"category_scores_gemma":[0.000030089812,0.0003655482,0.00031835356,0.00014097804,0.00005391725,0.0000044719236,0.00030854842,0.0003412882,0.000055305394],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000796781,0.00017517124,0.000018979768,0.016533703,0.00133214,0.00017212557,0.000014367905,0.0018724342,0.08790503,0.00358345,0.0059783994,0.88233453],"study_design_scores_gemma":[0.0004336988,0.00034704473,0.0000033544366,0.0017594728,0.0005605749,0.000060905553,0.000019404872,0.00111268,0.0015441232,0.00011577176,0.99328166,0.00076129136],"about_ca_topic_score_codex":0.00004148997,"about_ca_topic_score_gemma":0.0000044408393,"teacher_disagreement_score":0.98730326,"about_ca_system_score_codex":0.00008220234,"about_ca_system_score_gemma":0.00018659254,"threshold_uncertainty_score":0.99987966},"labels":[],"label_agreement":null},{"id":"W2985349530","doi":"10.1016/j.molcel.2019.10.010","title":"ATR Protects the Genome against R Loops through a MUS81-Triggered Feedback Loop","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":145,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; Fonds de Recherche du Québec - Santé; Edward P. Evans Foundation","keywords":"Biology; Genome instability; Cell biology; DNA replication; DNA damage; Genetics; Gene; DNA","score_opus":0.005742060480475551,"score_gpt":0.20040456425234657,"score_spread":0.19466250377187103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2985349530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96686214,0.0018050431,0.0036791924,0.00021940896,0.00024532294,0.0013506212,0.00001480868,0.000053198655,0.025770232],"genre_scores_gemma":[0.9868761,0.00008857184,0.0019277503,0.001979636,0.00012348984,0.00009400699,0.00012567456,0.00009611134,0.008688662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980538,0.00015515163,0.00026309374,0.0006930991,0.0003081031,0.00052674],"domain_scores_gemma":[0.99836177,0.000009292047,0.00013759456,0.0013004265,0.000095428084,0.000095502284],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022961994,0.00032697307,0.00023202505,0.000031258056,0.00009756336,0.00006296182,0.0006198498,0.00026663407,0.00009495285],"category_scores_gemma":[0.00003420623,0.0002611067,0.000270926,0.00018985393,0.00007408325,0.000006306788,0.00034570752,0.00022113357,0.0007385431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048320235,0.00007578213,0.000036036665,0.0000514179,0.000059287948,0.000037403654,0.00007845455,0.00030784786,0.9983377,0.00009477836,0.00041315253,0.00045980676],"study_design_scores_gemma":[0.0008688132,0.00028922845,0.000056872053,0.00001233279,0.000023573602,0.000012594153,0.00008434482,0.00010498376,0.9041152,0.00018328032,0.09388943,0.00035934936],"about_ca_topic_score_codex":0.00001580887,"about_ca_topic_score_gemma":0.000004740708,"teacher_disagreement_score":0.094222516,"about_ca_system_score_codex":0.000030347344,"about_ca_system_score_gemma":0.00011253401,"threshold_uncertainty_score":0.9999841},"labels":[],"label_agreement":null},{"id":"W2994169676","doi":"10.1016/j.molcel.2019.11.003","title":"Targeting UBE4A Revives Viperin Protein in Epithelium to Enhance Host Antiviral Defense","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Biology; Antiviral protein; Acetylation; Virology; Cell biology; Interferon; Viral replication; Epithelium; Virus; Gene; RNA; Genetics","score_opus":0.0032652701633904845,"score_gpt":0.22217952222866752,"score_spread":0.21891425206527704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994169676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886857,0.0028456214,0.00042573514,0.00018222968,0.00026615907,0.00065249647,0.000006727522,0.000037229565,0.0068980865],"genre_scores_gemma":[0.9832768,0.000022555087,0.00028360647,0.00034736417,0.0000071966433,0.000037698446,0.000015169397,0.000027481203,0.015982116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855304,0.0003573876,0.00026689458,0.00035710854,0.00003332272,0.00043225018],"domain_scores_gemma":[0.9995352,0.000032360447,0.000062435865,0.00031844998,0.00003463125,0.000016916943],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024701655,0.00018970291,0.00026824992,0.00013714477,0.000041395248,0.000016540993,0.00022844803,0.00014945681,0.00046978745],"category_scores_gemma":[0.00008570036,0.00017984482,0.000087932305,0.0001463757,0.000046606998,0.000051659685,0.0001387828,0.00027869403,0.006307784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003389349,0.000074337,0.0003525094,0.000039000643,0.0000138583855,0.000032792337,0.0003631582,0.0000050600916,0.99798685,0.00008653559,0.00018921502,0.00051772344],"study_design_scores_gemma":[0.0003954897,0.00029850187,0.0004722498,0.00011132355,0.0000040636633,0.000004397553,0.00017769066,0.0000043070145,0.9586258,0.000006631079,0.039674558,0.00022497917],"about_ca_topic_score_codex":0.0000582189,"about_ca_topic_score_gemma":0.0000039468755,"teacher_disagreement_score":0.039485343,"about_ca_system_score_codex":0.00003356257,"about_ca_system_score_gemma":0.00003624372,"threshold_uncertainty_score":0.99446595},"labels":[],"label_agreement":null},{"id":"W2994360576","doi":"10.1016/j.molcel.2019.11.007","title":"Altered m6A Modification of Specific Cellular Transcripts Affects Flaviviridae Infection","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":196,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Mental Health; WorldQuant Foundation; National Heart, Lung, and Blood Institute; National Institutes of Health; Pershing Square Sohn Cancer Research Alliance; Natural Sciences and Engineering Research Council of Canada; American Heart Association; Vallee Foundation; University of North Carolina; Burroughs Wellcome Fund; National Aeronautics and Space Administration","keywords":"Biology; Flaviviridae; Virology; Computational biology; Genetics; Virus; Hepatitis C virus","score_opus":0.00953239989758277,"score_gpt":0.2217736493226846,"score_spread":0.2122412494251018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994360576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95309955,0.0019688944,0.036991052,0.000039595718,0.00030205806,0.00038007242,0.000011222931,0.000014449094,0.0071930774],"genre_scores_gemma":[0.99791616,0.0003033762,0.00034136683,0.000059651513,0.00008138497,0.000032660737,0.00020214927,0.00003465182,0.001028605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989696,0.00007496718,0.00020272096,0.0003943626,0.00016415384,0.00019416556],"domain_scores_gemma":[0.9990413,0.0000036019492,0.00015945057,0.00065426755,0.00008213972,0.000059218815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012166473,0.0001596947,0.00015189049,0.00006885269,0.00003541885,0.000018973255,0.00015401474,0.0001460611,0.0000677384],"category_scores_gemma":[0.000005289849,0.00017004223,0.0001563897,0.0001425521,0.000041759453,0.000006275792,0.000024823417,0.0000815127,0.00007506148],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003185018,0.000103080325,0.0013086697,0.000057902416,0.000019909081,9.751898e-7,0.0000334538,0.00090042595,0.995437,0.00022125035,0.00057727285,0.0013081564],"study_design_scores_gemma":[0.00055714377,0.00018756276,0.004142601,0.000011096531,0.00001835219,0.0000013616365,0.000013051692,0.00016624283,0.9568949,0.00003684035,0.03778932,0.00018153622],"about_ca_topic_score_codex":0.00002599619,"about_ca_topic_score_gemma":0.0000031615502,"teacher_disagreement_score":0.044816576,"about_ca_system_score_codex":0.000019587505,"about_ca_system_score_gemma":0.00004045127,"threshold_uncertainty_score":0.69341207},"labels":[],"label_agreement":null},{"id":"W2996619543","doi":"10.1016/j.molcel.2019.11.017","title":"Splicing Kinetics and Coordination Revealed by Direct Nascent RNA Sequencing through Nanopores","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":258,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; Fonds de Recherche du Québec - Santé; National Institutes of Health","keywords":"Intron; RNA splicing; Biology; RNA; Genetics; Exonic splicing enhancer; Splicing factor; Transcription (linguistics); Exon; Alternative splicing; Spliceosome; Post-transcriptional modification; Gene; Cell biology","score_opus":0.006385463928448113,"score_gpt":0.23430160311827752,"score_spread":0.22791613918982942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996619543","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98229,0.0027648634,0.0015945536,0.00014673076,0.00007365763,0.00029831604,0.000007996819,0.000015060113,0.012808801],"genre_scores_gemma":[0.99065006,0.00028834795,0.0007967755,0.00035007022,0.000046925943,0.0000098912615,0.0000938932,0.000034654055,0.0077294093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879146,0.00007601205,0.00017508483,0.00041033898,0.00021077304,0.00033631007],"domain_scores_gemma":[0.9994329,0.000011722056,0.00006921069,0.0003239308,0.00007097256,0.00009124718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001641996,0.00016703413,0.00016025954,0.00003199265,0.000061348735,0.0000479033,0.00013715774,0.000119417615,0.000014529075],"category_scores_gemma":[0.00004442534,0.00016385443,0.00006141027,0.000090099944,0.000042347157,0.0000065643567,0.0001265996,0.0001050134,0.000016797389],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023120574,0.000024127134,0.0012682793,0.000058733458,0.000019492787,0.000011044144,0.000038303027,0.00007346178,0.99567807,0.000022588913,0.0022217839,0.0005609885],"study_design_scores_gemma":[0.0005735461,0.00028493066,0.00014317648,0.000028885826,0.000011315226,0.0000058964506,0.00006990522,0.0003539586,0.97995394,0.000028197097,0.018340273,0.00020597373],"about_ca_topic_score_codex":0.00010214691,"about_ca_topic_score_gemma":0.0000069247913,"teacher_disagreement_score":0.016118487,"about_ca_system_score_codex":0.000039370083,"about_ca_system_score_gemma":0.000036943056,"threshold_uncertainty_score":0.668179},"labels":[],"label_agreement":null},{"id":"W2999304491","doi":"10.1016/j.molcel.2019.12.027","title":"Candidate Cancer Driver Mutations in Distal Regulatory Elements and Long-Range Chromatin Interaction Networks","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":108,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; Princess Margaret Cancer Centre; Hospital for Sick Children; University of Toronto; Ontario Institute for Cancer Research","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Institute for Cancer Research; Eesti Teadusagentuur; University of Toronto; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Biology; Chromatin; Genetics; Gene; Computational biology; Genome; Carcinogenesis; Epigenetics; Indel; Exome; Exome sequencing; Mutation","score_opus":0.0043347280909043495,"score_gpt":0.2174485476374324,"score_spread":0.21311381954652805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999304491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930178,0.0007940299,0.0054749213,0.00015142333,0.00006735778,0.00016633933,0.000024639305,0.0000071145028,0.00029639486],"genre_scores_gemma":[0.9986196,0.00017058097,0.0003364423,0.0004341882,0.000055723343,0.000025244824,0.00026630884,0.000024018027,0.00006786319],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9992681,0.000035262852,0.00018324857,0.00027317356,0.00007143128,0.00016879705],"domain_scores_gemma":[0.9996769,0.0000027278743,0.000076990706,0.00013665685,0.00002177149,0.00008497898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000042435382,0.00012488788,0.00010174944,0.000022232392,0.000039291805,0.000027823235,0.000083861065,0.000080925995,0.00002610387],"category_scores_gemma":[0.00000675405,0.00013887692,0.00004027939,0.00006634827,0.00003476522,0.000004407354,0.00009259889,0.00008813609,0.0000029680425],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005109244,0.000063839594,0.041692905,0.00007155604,0.000052142746,0.000050542545,0.00034826234,0.015786441,0.93967056,0.000025960228,0.00039114634,0.0017955306],"study_design_scores_gemma":[0.007924901,0.0009245731,0.23581953,0.00016371548,0.00025500753,0.00003217103,0.000913829,0.45332494,0.28399152,0.00015021983,0.014305829,0.0021937343],"about_ca_topic_score_codex":0.000051095405,"about_ca_topic_score_gemma":0.0003677605,"teacher_disagreement_score":0.65567905,"about_ca_system_score_codex":0.000026569767,"about_ca_system_score_gemma":0.000029950621,"threshold_uncertainty_score":0.56632364},"labels":[],"label_agreement":null},{"id":"W2999860983","doi":"10.1016/j.molcel.2019.10.031","title":"HMCES Functions in the Alternative End-Joining Pathway of the DNA DSB Repair during Class Switch Recombination in B Cells","year":2019,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; Structural Genomics Consortium; University of Toronto","funders":"Eshelman Institute for Innovation, University of North Carolina at Chapel Hill; Janssen Pharmaceuticals; U.S. National Library of Medicine; Pfizer; Natural Sciences and Engineering Research Council of Canada; Takeda Canada; Canadian Institutes of Health Research; Innovative Medicines Initiative; Leukemia and Lymphoma Society of Canada; National Institutes of Health; Canada Foundation for Innovation; Ontario Ministry of Research, Innovation and Science; Wellcome Trust; Consejo Nacional de Ciencia y Tecnología; National Institute of Allergy and Infectious Diseases; National Center for Research Resources; AbbVie; Novartis Pharma; Ontario Genomics Institute; Genome Canada; Office of Science; Boehringer Ingelheim; Bayer; National Cancer Institute; Merck","keywords":"Biology; Recombination; DNA; Non-homologous end joining; Immunoglobulin class switching; Cell biology; Class (philosophy); Genetics; DNA repair; B cell; Gene; Antibody; Computer science","score_opus":0.004756061082385877,"score_gpt":0.19346853153473387,"score_spread":0.18871247045234799,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999860983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909045,0.00013823973,0.00015866608,0.000091949594,0.0002894318,0.00042227836,0.0000066379794,0.000010552624,0.007977756],"genre_scores_gemma":[0.99862766,0.000014027152,0.00015588099,0.00016478823,0.00002109558,0.000036243982,0.000017902916,0.000021587126,0.00094079965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870455,0.00026522393,0.00026196375,0.0003409268,0.00021687754,0.0002104562],"domain_scores_gemma":[0.9992102,0.000021961048,0.00014247624,0.00056111446,0.000044407792,0.000019869483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041510098,0.00013949057,0.00013091353,0.00007118849,0.000037628986,0.000013384353,0.00032502812,0.00011519216,0.000020155636],"category_scores_gemma":[0.000034659042,0.0001036623,0.00015108786,0.00022065225,0.000029345192,0.000006319379,0.000152061,0.00017514187,0.0000137771185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022538567,0.00009999853,0.0021198273,0.00003034493,0.00001292827,0.00000940557,0.0003441567,0.0009780404,0.99605876,0.00016879056,0.000029110457,0.00012608423],"study_design_scores_gemma":[0.00066058396,0.00012375384,0.0021499582,0.000032882384,0.000007756733,0.0000035984626,0.0005215953,0.0005754605,0.99429274,0.00020321117,0.0013061373,0.00012234878],"about_ca_topic_score_codex":0.00006150622,"about_ca_topic_score_gemma":0.000093760515,"teacher_disagreement_score":0.007723186,"about_ca_system_score_codex":0.00003503176,"about_ca_system_score_gemma":0.000052434687,"threshold_uncertainty_score":0.42272258},"labels":[],"label_agreement":null},{"id":"W3000877897","doi":"10.1016/j.molcel.2019.12.023","title":"Cancer Cells Employ Nuclear Caspase-8 to Overcome the p53-Dependent G2/M Checkpoint through Cleavage of USP28","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Cancer Institute; Bundesministerium für Bildung und Forschung; Fonds National de la Recherche Luxembourg; Prostate Cancer Canada","keywords":"Biology; Caspase; Cell cycle checkpoint; Cell biology; Mitosis; NLRP1; Caspase 3; Caspase 2; Apoptosis; Cell cycle; DNA damage; Cancer research; Caspase 8; G2-M DNA damage checkpoint; Cancer cell; Programmed cell death; Cancer; Genetics; DNA","score_opus":0.01952912643812511,"score_gpt":0.25216878922658403,"score_spread":0.23263966278845893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000877897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95172966,0.0030374809,0.0048863045,0.012073569,0.00056408317,0.0020480847,0.00013998299,0.00020669059,0.025314154],"genre_scores_gemma":[0.98343474,0.0001607584,0.0013045752,0.014331979,0.00015666595,0.00004392814,0.000013062552,0.00016993374,0.00038437115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974229,0.00011019578,0.0005294299,0.0006440983,0.00077514234,0.0005182638],"domain_scores_gemma":[0.99836683,0.000027442999,0.00018639781,0.00090426696,0.0001299003,0.00038514906],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015309251,0.00036196772,0.00055296766,0.00006268684,0.00008403392,0.000031403168,0.00039786828,0.00019302631,0.0005284205],"category_scores_gemma":[0.000060311777,0.0003007319,0.00038222337,0.00051566825,0.00010605195,0.000052762203,0.00030811262,0.0005679396,0.00048286756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027262437,0.00014959431,0.00004009791,0.00019451596,0.00014329415,0.00068391307,0.0033191498,0.0012155663,0.98143786,0.00009976185,0.0119707715,0.00047283887],"study_design_scores_gemma":[0.0016091459,0.0005952328,0.00016164452,0.00010714145,0.00029762654,0.000021018743,0.000315952,0.00021988255,0.9390551,0.000027388633,0.057285793,0.00030409195],"about_ca_topic_score_codex":0.001093758,"about_ca_topic_score_gemma":0.0000389803,"teacher_disagreement_score":0.045315024,"about_ca_system_score_codex":0.00021067639,"about_ca_system_score_gemma":0.00020311495,"threshold_uncertainty_score":0.9999445},"labels":[],"label_agreement":null},{"id":"W3002960004","doi":"10.1016/j.molcel.2019.12.025","title":"Allosteric Regulation of BH3 Proteins in Bcl-xL Complexes Enables Switch-like Activation of Bax","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; McMaster University; University of Toronto; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Deutsche Forschungsgemeinschaft","keywords":"Bcl-xL; Allosteric regulation; Biology; Activator (genetics); Cell biology; Apoptosis; Function (biology); Plasma protein binding; Programmed cell death; Biochemistry; Enzyme; Receptor","score_opus":0.010538622288981045,"score_gpt":0.20660282764514865,"score_spread":0.1960642053561676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3002960004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95948946,0.0002914576,0.038746547,0.00015444706,0.000033028817,0.00040737804,0.00000654268,0.000006983938,0.0008641412],"genre_scores_gemma":[0.9967227,0.000041240266,0.0027195683,0.00011671502,0.000034009186,0.000011987298,0.00019866531,0.000020608288,0.0001344806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910146,0.000059010385,0.00029485387,0.0002535005,0.00016290677,0.00012827934],"domain_scores_gemma":[0.99948096,0.0000045005218,0.000185892,0.0002084594,0.00007706216,0.000043105614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008381947,0.00012260427,0.00017207107,0.00005506685,0.000018227198,0.0000063619345,0.00010663962,0.00012927601,0.000027248056],"category_scores_gemma":[0.000019244479,0.00012343144,0.00008027474,0.00016925874,0.00003301659,0.0000060148577,0.00006991376,0.00004797788,0.0000017249157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009637232,0.00007295384,0.000237347,0.00013741481,0.00001204583,0.0000013137565,0.00011579869,0.0021049604,0.99560076,0.00018504249,0.00005541155,0.0013805514],"study_design_scores_gemma":[0.0005936865,0.00028811753,0.0022178327,0.000026934202,0.000011681252,7.0826053e-7,0.00005156419,0.0014865437,0.9921039,0.00021525237,0.0028806054,0.00012321465],"about_ca_topic_score_codex":0.000056021927,"about_ca_topic_score_gemma":0.000009789507,"teacher_disagreement_score":0.037233252,"about_ca_system_score_codex":0.000009638777,"about_ca_system_score_gemma":0.000037844664,"threshold_uncertainty_score":0.5033388},"labels":[],"label_agreement":null},{"id":"W3004286746","doi":"10.1016/j.molcel.2020.01.006","title":"Autism-Misregulated eIF4G Microexons Control Synaptic Translation and Higher Order Cognitive Functions","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":124,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Hospital for Sick Children; Occupational Cancer Research Centre; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; EIF4G; Neuroscience; Synaptic plasticity; Translation (biology); Alternative splicing; RNA-binding protein; EIF4E; Genetics; RNA; Messenger RNA; Gene","score_opus":0.010873607777085634,"score_gpt":0.2255572849337736,"score_spread":0.21468367715668799,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004286746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9269962,0.0038788484,0.06372236,0.0022882237,0.000043983186,0.0003699347,0.00004496788,0.000028424412,0.002627089],"genre_scores_gemma":[0.9970355,0.000038754064,0.00030440657,0.001318399,0.00004320541,0.000020019197,0.00016507518,0.000028480366,0.0010461803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990404,0.00008861005,0.00013736731,0.00035530873,0.00011813544,0.0002601394],"domain_scores_gemma":[0.9995598,0.000015613572,0.000034545086,0.00012305815,0.00007351102,0.00019346358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005975993,0.00014647117,0.00012965313,0.00003024137,0.00009523705,0.000036799414,0.000072697556,0.00012927657,0.00007267662],"category_scores_gemma":[0.00003239474,0.00014757096,0.00006590903,0.0001346395,0.00008611103,0.0000043237837,0.000032189593,0.00012481248,0.00003576234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014890461,0.000030844927,0.00020247028,0.000022234197,0.00011093582,0.000027781094,0.000033154953,0.00007163337,0.9966152,0.00001675081,0.00038872715,0.0023313672],"study_design_scores_gemma":[0.0113732135,0.0019301701,0.005938652,0.000052019917,0.00043876815,0.000032423064,0.0002516636,0.013914685,0.9143363,0.00006782082,0.05059874,0.0010654913],"about_ca_topic_score_codex":0.000015489022,"about_ca_topic_score_gemma":0.0000045869488,"teacher_disagreement_score":0.08227884,"about_ca_system_score_codex":0.0000053109575,"about_ca_system_score_gemma":0.00004882548,"threshold_uncertainty_score":0.6017769},"labels":[],"label_agreement":null},{"id":"W3004450975","doi":"10.1016/j.molcel.2020.01.020","title":"Imprinted Maternally Expressed microRNAs Antagonize Paternally Driven Gene Programs in Neurons","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Eye Institute; National Institutes of Health; National Cancer Institute; Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genomic imprinting; microRNA; Gene silencing; Genetics; Gene; Regulation of gene expression; Gene expression; Gene cluster; Psychological repression; DNA methylation","score_opus":0.013404715163751761,"score_gpt":0.20686282610414045,"score_spread":0.19345811094038867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004450975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920025,0.00028909268,0.0063306154,0.00035083716,0.000095874086,0.000328183,0.000008936178,0.000027929167,0.0005660506],"genre_scores_gemma":[0.99344397,0.000084055646,0.0049712993,0.0011056956,0.00007730494,0.000028067056,0.00008575436,0.00006518623,0.00013866214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983521,0.000075913435,0.00033761258,0.000613301,0.00016694407,0.00045411277],"domain_scores_gemma":[0.9992671,0.0000026515586,0.00010871973,0.00037587946,0.000054369037,0.00019125684],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000067521294,0.0002563652,0.0002111372,0.000038852606,0.00003337632,0.00007284741,0.0004448697,0.00013763255,0.000028685721],"category_scores_gemma":[0.000022733262,0.0002684964,0.00014502725,0.00012503765,0.000040742103,0.0000033927638,0.00036041762,0.00015356623,0.000045377987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030568142,0.000086339074,0.024619322,0.00003710392,0.00002299903,0.00013713873,0.00009550455,0.00016908541,0.973196,0.0000015015553,0.00003647635,0.0015679131],"study_design_scores_gemma":[0.0011328328,0.00042737348,0.011272733,0.000015237241,0.000014604558,0.000027787746,0.000034583794,0.00046891658,0.9797903,0.0000076059487,0.006499358,0.0003087252],"about_ca_topic_score_codex":0.000048356593,"about_ca_topic_score_gemma":0.000007293065,"teacher_disagreement_score":0.013346588,"about_ca_system_score_codex":0.00001003865,"about_ca_system_score_gemma":0.00005394565,"threshold_uncertainty_score":0.9999767},"labels":[],"label_agreement":null},{"id":"W3006908568","doi":"10.1016/j.molcel.2020.02.006","title":"Lamina-Dependent Stretching and Unconventional Chromosome Compartments in Early C. elegans Embryos","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Universität Basel; Howard Hughes Medical Institute","keywords":"Biology; Caenorhabditis elegans; Lamina; Embryo; Cell biology; Chromosome; Evolutionary biology; Genetics; Anatomy; Gene","score_opus":0.0104343744308056,"score_gpt":0.2401636326067961,"score_spread":0.2297292581759905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006908568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99723816,0.0006208933,0.00067363016,0.00024915414,0.000023134688,0.0001734598,0.000012041053,0.0000075491403,0.0010019749],"genre_scores_gemma":[0.99875623,0.00003900567,0.0002101622,0.00036901102,0.00004587583,0.000011922835,0.00007081387,0.000018321076,0.00047866383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989839,0.000069803995,0.00015346096,0.00033480523,0.00019384385,0.0002641442],"domain_scores_gemma":[0.9996355,0.0000047341196,0.00003340602,0.00013860459,0.00002290913,0.00016481074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000093017414,0.00012325242,0.00012137425,0.00003282151,0.00004012488,0.000040776074,0.00013576091,0.000069078924,0.000016616184],"category_scores_gemma":[0.000018975747,0.00012989684,0.000050729817,0.00007111445,0.000033861335,0.0000052521295,0.00014034814,0.00013519754,0.00001909968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039036848,0.00005018981,0.014364489,0.00003218252,0.00001908009,0.0001267695,0.000068823996,0.00010013398,0.9847589,0.000048743663,0.00011326016,0.00027836827],"study_design_scores_gemma":[0.0021527372,0.0005660723,0.009857754,0.000022368306,0.000011828953,0.000008889993,0.00014146858,0.0016350126,0.98311114,0.0000638735,0.0021283268,0.00030052726],"about_ca_topic_score_codex":0.00005201968,"about_ca_topic_score_gemma":0.00002196918,"teacher_disagreement_score":0.0045067356,"about_ca_system_score_codex":0.000012919483,"about_ca_system_score_gemma":0.00004070493,"threshold_uncertainty_score":0.5297039},"labels":[],"label_agreement":null},{"id":"W3010258033","doi":"10.1016/j.molcel.2019.12.020","title":"Classification and Nomenclature of Metacaspases and Paracaspases: No More Confusion with Caspases","year":2020,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Ottawa Hospital; University of Ottawa","funders":"National Institute of General Medical Sciences; Knut och Alice Wallenbergs Stiftelse","keywords":"Biology; Confusion; Nomenclature; Caspase; Computational biology; Genetics; Apoptosis; Zoology; Taxonomy (biology); Programmed cell death; Psychoanalysis","score_opus":0.008155676471147587,"score_gpt":0.20713723488022007,"score_spread":0.19898155840907247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010258033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7960495,0.034060553,0.010739813,0.15024091,0.00043396672,0.0029428173,0.00062698673,0.00008783798,0.0048176353],"genre_scores_gemma":[0.77524036,0.005458289,0.008283981,0.19674699,0.001433061,0.00010982138,0.0082154805,0.00027509057,0.004236921],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986013,0.000074204,0.00024125818,0.00064341107,0.00023878158,0.0002010244],"domain_scores_gemma":[0.9991275,0.000016480604,0.00026988535,0.00036753595,0.0001371782,0.000081387225],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000046334197,0.00034773737,0.0003505735,0.00006957317,0.00006528251,0.000035417335,0.000110925816,0.0006018889,0.000015594671],"category_scores_gemma":[0.000019886937,0.0002846062,0.00008117067,0.00007868701,0.00016915453,0.000004576638,0.000115998584,0.00034051712,0.0000023553425],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009083283,0.000027098575,0.000052980246,0.00051635207,0.00009100422,0.00026102993,0.000045181947,0.000007996093,0.9526238,0.000037098525,0.045662824,0.00058384496],"study_design_scores_gemma":[0.0008762308,0.0009757084,0.00024597446,0.000107353575,0.0003990462,0.000083935694,0.000060072216,0.00027481496,0.3081625,0.00007259762,0.6881327,0.0006090779],"about_ca_topic_score_codex":0.000022429425,"about_ca_topic_score_gemma":0.0000023082773,"teacher_disagreement_score":0.6444613,"about_ca_system_score_codex":0.00000726682,"about_ca_system_score_gemma":0.000062625986,"threshold_uncertainty_score":0.9999606},"labels":[],"label_agreement":null},{"id":"W3015118083","doi":"10.1016/j.molcel.2020.03.010","title":"Cdk1 Controls Global Epigenetic Landscape in Embryonic Stem Cells","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome Canada; University of Toronto","funders":"National Institutes of Health; National Cancer Institute; Fundacja na rzecz Nauki Polskiej; National Institute of General Medical Sciences; Neos Therapeutics","keywords":"Cyclin-dependent kinase 1; Biology; Cell biology; Chromatin; Embryonic stem cell; Histone; Epigenetics; Cell cycle; Genetics; Gene","score_opus":0.008138251915596167,"score_gpt":0.21931836240771715,"score_spread":0.211180110492121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015118083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9694955,0.010461272,0.013304176,0.0003804191,0.00011415186,0.0003156341,0.000027549555,0.000016940925,0.0058843847],"genre_scores_gemma":[0.99804336,0.00030794906,0.00047287208,0.00079672266,0.00009801817,0.000017637356,0.000052633073,0.000029596516,0.00018118539],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998599,0.00012597507,0.00026135988,0.0004934444,0.00017805016,0.00034215758],"domain_scores_gemma":[0.99936146,0.000008039733,0.000084858,0.0003149214,0.000047475954,0.00018325137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012212702,0.00020949934,0.00021074018,0.000023476381,0.000031606985,0.00003651131,0.00023707541,0.00019013534,0.00003193656],"category_scores_gemma":[0.000013862499,0.00022320464,0.00012721482,0.00017172436,0.00002992938,0.000002332998,0.000111603185,0.00010187329,0.00008773325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006516928,0.000050969902,0.0044799824,0.00002776833,0.000016371821,0.00003861341,0.000034321703,0.0036599466,0.9894724,0.000028350712,0.00019171945,0.0019343854],"study_design_scores_gemma":[0.0013810805,0.00042718928,0.0009780555,0.000006332835,0.000021795435,7.7798563e-7,0.000048165766,0.0011553781,0.97258043,0.00007947273,0.023025312,0.0002960162],"about_ca_topic_score_codex":0.000011235049,"about_ca_topic_score_gemma":0.000014875574,"teacher_disagreement_score":0.028547915,"about_ca_system_score_codex":0.000017275737,"about_ca_system_score_gemma":0.00007914481,"threshold_uncertainty_score":0.91020215},"labels":[],"label_agreement":null},{"id":"W3016408341","doi":"10.1016/j.molcel.2020.03.028","title":"Protein Aggregation Triggered by Rewired Protein Homeostasis during Neuronal Differentiation","year":2020,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Biology; Neural stem cell; Cell biology; Protein aggregation; Cellular differentiation; Homeostasis; Stem cell; Genetics; Gene","score_opus":0.005086395429878914,"score_gpt":0.18856994866018556,"score_spread":0.18348355323030666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016408341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9329137,0.002575641,0.0014264751,0.05937684,0.00015741792,0.0020926304,0.00064726983,0.00008591188,0.00072410406],"genre_scores_gemma":[0.92239344,0.00013631412,0.0003189831,0.05575095,0.0010766315,0.0006434903,0.014839241,0.00024619323,0.0045947353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99721855,0.00026774162,0.00044762413,0.0010391308,0.0005284404,0.00049852906],"domain_scores_gemma":[0.9987166,0.00000536075,0.0003726658,0.00063898496,0.00009257997,0.00017381393],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000037915717,0.00055179565,0.00038478058,0.000080587364,0.00012866482,0.00012369116,0.00037239117,0.0006618322,0.00005712123],"category_scores_gemma":[0.00008909503,0.0005782908,0.00035880142,0.00013161662,0.000070806695,0.0000065017807,0.00018188963,0.0006420019,0.00004086268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010656888,0.00007977271,0.000012086195,0.00048464694,0.00007462567,0.0003060153,0.000009893943,0.0000058673995,0.84125006,0.0000014154557,0.15733479,0.00033423674],"study_design_scores_gemma":[0.0013710605,0.000176786,0.000019482597,0.00008518285,0.000106841384,0.0000035926314,0.0000048613265,0.000037080074,0.85483104,0.00004118937,0.14275208,0.0005707929],"about_ca_topic_score_codex":0.000015132094,"about_ca_topic_score_gemma":7.9118524e-7,"teacher_disagreement_score":0.014582703,"about_ca_system_score_codex":0.00003830559,"about_ca_system_score_gemma":0.00012287936,"threshold_uncertainty_score":0.99966687},"labels":[],"label_agreement":null},{"id":"W3018428740","doi":"10.1016/j.molcel.2020.04.007","title":"A Family of Argonaute-Interacting Proteins Gates Nuclear RNAi","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Cancer Research UK; Human Frontier Science Program; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"Argonaute; RNA interference; Biology; Piwi-interacting RNA; RasiRNA; Genetics; Epigenetics; Gene silencing; Germline; Cell biology; Caenorhabditis elegans; Gene; RNA","score_opus":0.006495592036190433,"score_gpt":0.2432312902615753,"score_spread":0.23673569822538487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3018428740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9577861,0.0011880238,0.033936925,0.0002698451,0.000066971195,0.00019368035,0.000007467369,0.00002327143,0.006527722],"genre_scores_gemma":[0.9940489,0.000038130114,0.005251192,0.00046714165,0.00007154149,0.000005826767,0.00001804333,0.000037656115,0.00006158722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992825,0.000020636724,0.0001727983,0.00024889107,0.000102328006,0.00017285882],"domain_scores_gemma":[0.9996063,0.000004026756,0.00005717428,0.00020104721,0.00004006679,0.0000913691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004333767,0.00012771989,0.00013164298,0.000018917193,0.000022549779,0.000013084144,0.000164016,0.000073132556,0.000018976158],"category_scores_gemma":[0.00004978565,0.00013620898,0.00011036799,0.000072322044,0.000022048109,0.000001760917,0.0001127119,0.00008691145,0.000018578981],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027988805,0.00002583886,0.00006779732,0.000068387446,0.000022972834,0.000013290367,0.00011313463,0.001531891,0.99718165,0.000037288955,0.0003953532,0.0005143915],"study_design_scores_gemma":[0.0002892983,0.00021986467,0.00010767333,0.000014401411,0.000013961892,0.00000261468,0.00010798945,0.0013489798,0.97147596,0.000008808574,0.026261471,0.00014898466],"about_ca_topic_score_codex":0.000009678382,"about_ca_topic_score_gemma":6.3016495e-7,"teacher_disagreement_score":0.036262788,"about_ca_system_score_codex":0.0000033441465,"about_ca_system_score_gemma":0.00002322049,"threshold_uncertainty_score":0.55544406},"labels":[],"label_agreement":null},{"id":"W3018649179","doi":"10.1016/j.molcel.2020.03.031","title":"Absolute Quantification of Transcription Factors Reveals Principles of Gene Regulation in Erythropoiesis","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":117,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Medical Research Council; Wellcome Trust","keywords":"Biology; Transcription factor; Erythropoiesis; Gene; Gene regulatory network; Context (archaeology); Regulation of gene expression; Transcriptional regulation; Repressor; Transcription (linguistics); Computational biology; Genetics; Gene expression; Cell biology","score_opus":0.01862632320075403,"score_gpt":0.21784466925206747,"score_spread":0.19921834605131344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3018649179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9671511,0.00033749995,0.031820886,0.000078457866,0.00002749051,0.00019502218,0.000028425746,0.000003687113,0.0003574017],"genre_scores_gemma":[0.9966886,0.00008516058,0.0028544546,0.000027740227,0.000011361419,0.0000049803643,0.00026648436,0.000016741642,0.000044484732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992066,0.00004439844,0.00034387628,0.00020777101,0.00009962297,0.000097717886],"domain_scores_gemma":[0.99950135,0.0000034807358,0.00018607722,0.00021513276,0.000059164682,0.000034809636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000089193396,0.00009556379,0.00014882348,0.0000368192,0.000012599285,0.000004395485,0.00011467817,0.00010244066,0.000008223784],"category_scores_gemma":[0.000023160594,0.0001035251,0.00008664602,0.0001071361,0.000038474325,0.0000026678988,0.000021271659,0.00003573045,0.0000010192656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026001157,0.000045382523,0.0017367958,0.00010683859,0.000011879828,5.05536e-7,0.00021075337,0.0063808924,0.9912066,0.00016556164,0.000011138118,0.000097671924],"study_design_scores_gemma":[0.00026404017,0.00011026411,0.019631581,0.000009601346,0.000015137486,2.7866022e-7,0.00008728075,0.0029485903,0.97645485,0.00004620369,0.00033756346,0.00009458049],"about_ca_topic_score_codex":0.000021353957,"about_ca_topic_score_gemma":0.00001117504,"teacher_disagreement_score":0.029537464,"about_ca_system_score_codex":0.000009478755,"about_ca_system_score_gemma":0.00002685456,"threshold_uncertainty_score":0.42216307},"labels":[],"label_agreement":null},{"id":"W3021075530","doi":"10.1016/j.molcel.2020.04.014","title":"Cryo-EM Structures and Regulation of Arabinofuranosyltransferase AftD from Mycobacteria","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Magnetic and Electromagnetic Effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Center for Research Resources; Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa; European Regional Development Fund; National Institute of Allergy and Infectious Diseases; Horizon 2020; Fundação para a Ciência e a Tecnologia; Horizon 2020 Framework Programme; National Institutes of Health; Alberta Glycomics Centre; University of Alabama; Simons Foundation; H2020 Marie Skłodowska-Curie Actions; Empire State Development's Division of Science, Technology and Innovation; Agency for Science, Technology and Research; National Institute of General Medical Sciences; University of Alabama at Birmingham; Columbia University","keywords":"Biology; Computational biology; Mycobacterium; Microbiology; Bacteria; Genetics","score_opus":0.0032506926144536285,"score_gpt":0.1794735906680811,"score_spread":0.17622289805362748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021075530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908529,0.0016182881,0.0058550625,0.00016002255,0.000038911174,0.00017699956,0.00003058336,0.000010398904,0.001256842],"genre_scores_gemma":[0.99726796,0.00007522103,0.0017779575,0.0005169571,0.00008061507,0.0000053202816,0.00018232936,0.000021092113,0.00007253669],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991519,0.00007292371,0.00017118112,0.0003290217,0.00011342886,0.00016157904],"domain_scores_gemma":[0.99957913,0.000009059462,0.00004966484,0.0002095771,0.00003458212,0.00011795641],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000034225093,0.00015464678,0.00016751069,0.000016608547,0.000024721023,0.000017090302,0.000103759994,0.00012904627,0.00013501392],"category_scores_gemma":[0.000026437623,0.00015423191,0.000061743696,0.00005872166,0.000054565447,0.000002231799,0.000042422173,0.0000631434,0.0000032889031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001271761,0.000015721836,0.00028247418,0.000062317326,0.000015862399,0.0000059494078,0.00009800046,0.000027255659,0.99647796,0.00007526574,0.00035326247,0.0024587682],"study_design_scores_gemma":[0.0007550344,0.00071226084,0.009087386,0.000005411362,0.000046370387,0.0000022646582,0.00001873221,0.00013609683,0.9863284,0.00030624136,0.002434363,0.00016742584],"about_ca_topic_score_codex":0.000029778721,"about_ca_topic_score_gemma":0.000004640362,"teacher_disagreement_score":0.010149532,"about_ca_system_score_codex":0.0000020455009,"about_ca_system_score_gemma":0.000029094866,"threshold_uncertainty_score":0.62893945},"labels":[],"label_agreement":null},{"id":"W3033493591","doi":"10.1016/j.molcel.2020.05.005","title":"Single-Molecule Imaging of Telomerase RNA Reveals a Recruitment-Retention Model for Telomere Elongation","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research","keywords":"Telomere; Telomerase; Biology; Telomerase RNA component; RNA; Cell biology; Telomerase reverse transcriptase; Genetics; Gene","score_opus":0.06579403348340888,"score_gpt":0.285764837583462,"score_spread":0.2199708041000531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033493591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8176678,0.0015305122,0.17296594,0.0026521597,0.00010643766,0.0023401107,0.00006596282,0.00015470361,0.0025163617],"genre_scores_gemma":[0.97790504,0.00004532999,0.0187572,0.0024231025,0.00007557793,0.00011941021,0.00019286558,0.00008062904,0.00040083175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99785626,0.000068717985,0.00061701704,0.0005863615,0.00044571512,0.0004259134],"domain_scores_gemma":[0.99863744,0.000043138058,0.00029301218,0.0004113722,0.000300831,0.00031421785],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020319282,0.00029961666,0.0005050014,0.00016769566,0.00008602323,0.00002967592,0.00016570247,0.00011102217,0.000040377094],"category_scores_gemma":[0.00021183505,0.0003071972,0.00032284312,0.00041768394,0.0000813614,0.00013096868,0.000056307956,0.0001801303,0.000020120633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030856248,0.0002472417,0.000665534,0.0006574135,0.000044953562,0.00007591976,0.00070393307,0.00028682084,0.98378754,0.00013941522,0.00087040005,0.012212269],"study_design_scores_gemma":[0.0026016003,0.00039699397,0.0002099375,0.00016577702,0.00025887424,0.000012699897,0.00019841852,0.09515857,0.8995351,0.00031298585,0.0008146564,0.00033435036],"about_ca_topic_score_codex":0.000012735521,"about_ca_topic_score_gemma":0.0000010156173,"teacher_disagreement_score":0.16023724,"about_ca_system_score_codex":0.00008604381,"about_ca_system_score_gemma":0.00012393709,"threshold_uncertainty_score":0.999938},"labels":[],"label_agreement":null},{"id":"W3033735360","doi":"10.1016/j.molcel.2020.05.021","title":"Endogenous DNA 3′ Blocks Are Vulnerabilities for BRCA1 and BRCA2 Deficiency and Are Reversed by the APE2 Nuclease","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":118,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; Lunenfeld-Tanenbaum Research Institute; National Research Council Canada; Mount Sinai Hospital","funders":"Basic Energy Sciences; National Institute of Environmental Health Sciences; Medical Research Council; Canada Research Chairs; National Institutes of Health; Office of Science; Department of Energy, Labor and Economic Growth; National Center for Research Resources; Krembil Foundation; Argonne National Laboratory; U.S. Department of Energy; European Molecular Biology Organization; Canadian Cancer Society; Canadian Institutes of Health Research; National Research Council","keywords":"Biology; Nuclease; Endogeny; DNA; Genetics; Cell biology; Computational biology; Molecular biology; Biochemistry","score_opus":0.00969186557819323,"score_gpt":0.21997487695582926,"score_spread":0.21028301137763603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033735360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9717453,0.014127132,0.0119702695,0.0010255898,0.000045356235,0.00039016033,0.00008985748,0.000018183711,0.0005881626],"genre_scores_gemma":[0.99793166,0.00017737133,0.00043372638,0.0011736964,0.000059022917,0.000027420338,0.00002901702,0.000029306262,0.00013878757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918336,0.000027590782,0.00012643171,0.00036150205,0.000080974765,0.00022014072],"domain_scores_gemma":[0.99955976,0.000017443828,0.000048065613,0.0002221673,0.000035968704,0.00011658476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000074703596,0.0001622185,0.00013179776,0.000010849913,0.00011857456,0.00003879377,0.00012211512,0.00008637979,0.0000073248452],"category_scores_gemma":[0.00008047908,0.0001394765,0.00006407122,0.000043375545,0.00007802569,0.00000181766,0.00009497525,0.00007526272,0.0000011387161],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002816396,0.000021954807,0.00021672115,0.00011749387,0.000016546912,0.00000848892,0.0002510974,0.00017066658,0.9955953,0.000012567105,0.0029288956,0.0006321054],"study_design_scores_gemma":[0.000845487,0.00026065912,0.00012622657,0.00000928351,0.0000582035,0.000022835662,0.0010833123,0.00059223484,0.94478303,0.000044798024,0.051896263,0.00027764667],"about_ca_topic_score_codex":0.000008665924,"about_ca_topic_score_gemma":0.000004483444,"teacher_disagreement_score":0.05081225,"about_ca_system_score_codex":0.0000047815024,"about_ca_system_score_gemma":0.000017787426,"threshold_uncertainty_score":0.5687687},"labels":[],"label_agreement":null},{"id":"W3035475906","doi":"10.1016/j.molcel.2020.05.025","title":"Tuning Transcription Factor Availability through Acetylation-Mediated Genomic Redistribution","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"RIKEN; European Research Council; Fonds de Recherche du Québec - Santé; Associazione Italiana per la Ricerca sul Cancro; Centre National de la Recherche Scientifique; Ligue Contre le Cancer; Institut National Du Cancer; Ludwig Institute for Cancer Research; Institut National de la Santé et de la Recherche Médicale; NIHR Oxford Biomedical Research Centre; Wellcome Trust; Agence Nationale de la Recherche; Háskóli Íslands; L'Oreal USA; Fondazione Cariplo; Cancer Research UK; Harry J. Lloyd Charitable Trust; Melanoma Research Alliance; Medical Research Council; Cancer Research Society","keywords":"Biology; Transcription factor; Microphthalmia-associated transcription factor; Sp3 transcription factor; CREB; General transcription factor; E-box; Activating transcription factor 2; Cell biology; IRF4; Enhancer; Molecular biology; Genetics; Promoter; Gene expression; Gene","score_opus":0.010675634198566115,"score_gpt":0.2068054044442742,"score_spread":0.19612977024570807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035475906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.889878,0.0003985459,0.10752953,0.00034734624,0.00008172349,0.00020984554,0.000119907076,0.000030788116,0.0014043151],"genre_scores_gemma":[0.99577934,0.000065205895,0.0017389468,0.00060807867,0.00009054681,0.000009237551,0.0016359041,0.000031318497,0.00004143594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891573,0.000063633444,0.00025095863,0.00041937892,0.00012278136,0.00022752355],"domain_scores_gemma":[0.99945456,0.0000051880775,0.00009469877,0.00027149354,0.000066559645,0.00010748358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000065073975,0.00017686434,0.00013700253,0.000011225755,0.00007739153,0.000031075502,0.00017682766,0.00017830703,0.00005980197],"category_scores_gemma":[0.000050415023,0.00019864982,0.0001267455,0.00009577067,0.000044407076,0.0000058266014,0.000063044674,0.00011776289,0.00005620594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033475415,0.00003171573,0.00033696828,0.00002842335,0.000019097202,0.0000034702045,0.00021377433,0.00040774568,0.9984643,0.000046711666,0.00025106999,0.00016324065],"study_design_scores_gemma":[0.0010300371,0.00027876478,0.001466233,0.000005309197,0.000035319186,0.0000029468922,0.00013823119,0.011011354,0.9607687,0.00015616487,0.024697753,0.0004092039],"about_ca_topic_score_codex":0.0000069222524,"about_ca_topic_score_gemma":0.0000031759378,"teacher_disagreement_score":0.10590133,"about_ca_system_score_codex":0.000039214283,"about_ca_system_score_gemma":0.000065955,"threshold_uncertainty_score":0.81007046},"labels":[],"label_agreement":null},{"id":"W3042076923","doi":"10.1016/j.molcel.2020.06.029","title":"Systematic Discovery of Short Linear Motifs Decodes Calcineurin Phosphatase Signaling","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":85,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"National Institute of General Medical Sciences; Carl Tryggers Stiftelse för Vetenskaplig Forskning; Ontario Genomics; National Institutes of Health; Vetenskapsrådet; Science Foundation Ireland; Government of Canada; Canadian Institutes of Health Research; LOEWE-Zentrum für Translationale Medizin und Pharmakologie; Ontario Research Foundation; Government of Ontario; Stanford University","keywords":"Biology; In silico; Phosphatase; Calcineurin; Cell biology; Interactome; Proteome; Computational biology; Nuclear transport; Ankyrin repeat; Biochemistry; Phosphorylation; Gene; Cell nucleus","score_opus":0.012575438289918181,"score_gpt":0.23655069185634478,"score_spread":0.2239752535664266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042076923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9468113,0.0068379934,0.045403093,0.000040459992,0.000074175834,0.00041755073,0.00011015381,0.00002525694,0.00027998482],"genre_scores_gemma":[0.9975268,0.00002510447,0.0014275376,0.0005948055,0.00009165127,0.000028146986,0.00019744536,0.00005579184,0.000052720436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984513,0.0001245821,0.0004526055,0.00045798847,0.00026278934,0.000250748],"domain_scores_gemma":[0.9990789,0.00002360261,0.0001234288,0.0005087572,0.00007931401,0.00018597493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015727051,0.00023634688,0.0003320584,0.000025973504,0.000034940145,0.000025534022,0.00036182572,0.00011444357,0.000011179966],"category_scores_gemma":[0.00027633226,0.0002305412,0.000251646,0.00013926248,0.00006397926,0.000005902614,0.00017747466,0.00009549141,0.000017381059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007177637,0.00009740589,0.0004637477,0.0037779883,0.00007798524,0.00010811603,0.000050536204,0.004981191,0.9901739,0.000040105842,0.00014262041,0.0000146629145],"study_design_scores_gemma":[0.00033988708,0.00018976857,0.000010919378,0.0002540818,0.00013178677,0.0000023777932,0.000056992627,0.0013043394,0.9973736,0.000011922783,0.00009030197,0.00023406546],"about_ca_topic_score_codex":0.0000066964803,"about_ca_topic_score_gemma":4.658596e-7,"teacher_disagreement_score":0.050715465,"about_ca_system_score_codex":0.000009481693,"about_ca_system_score_gemma":0.00008013209,"threshold_uncertainty_score":0.94011974},"labels":[],"label_agreement":null},{"id":"W3043467755","doi":"10.1016/j.molcel.2020.06.035","title":"Beyond Equilibrium Phase Diagrams: Enzymatic Activity Shakes Up Bacterial Condensates","year":2020,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacteria; Biology; Scopus; Thermodynamics; Biochemistry; Physics; Genetics","score_opus":0.013366864711872421,"score_gpt":0.23809380278950365,"score_spread":0.22472693807763122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3043467755","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75224966,0.005050419,0.012392081,0.21057132,0.005505476,0.0034695899,0.0013345323,0.0002940192,0.009132906],"genre_scores_gemma":[0.4826385,0.00015028742,0.0022491813,0.48661402,0.009811846,0.00047125557,0.007736837,0.0006896326,0.009638433],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968214,0.0004555661,0.00041528224,0.0011452315,0.00045080693,0.0007117015],"domain_scores_gemma":[0.9983161,0.000047324284,0.0003485385,0.0010144529,0.00008512162,0.00018847447],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014620858,0.000764735,0.00069136516,0.00007468087,0.000088208864,0.0001894981,0.0007287578,0.001263699,0.00041170855],"category_scores_gemma":[0.0001225204,0.0007756332,0.00054755504,0.000105744606,0.00013443394,0.000007922774,0.00034039468,0.00073677674,0.00022636737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001154014,0.000059555765,7.000442e-7,0.00025137194,0.00012548736,0.00050922023,0.000024465095,9.565938e-7,0.73787445,0.0000023147247,0.25973505,0.0013010347],"study_design_scores_gemma":[0.00080672046,0.00041905008,2.0007663e-7,0.000024710325,0.00012254613,0.000011864031,0.0000051193,0.00002046577,0.64774185,0.00028552153,0.34999168,0.0005702396],"about_ca_topic_score_codex":0.000012644851,"about_ca_topic_score_gemma":0.0000017440484,"teacher_disagreement_score":0.2760427,"about_ca_system_score_codex":0.00002774352,"about_ca_system_score_gemma":0.0001901598,"threshold_uncertainty_score":0.99946946},"labels":[],"label_agreement":null},{"id":"W3044710522","doi":"10.1016/j.molcel.2020.07.005","title":"Rationally Designed APOBEC3B Cytosine Base Editors with Improved Specificity","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":166,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"National Transgenic Science and Technology Program; Youth Innovation Promotion Association of the Chinese Academy of Sciences; National Natural Science Foundation of China; United Soybean Board","keywords":"Biology; Cas9; Cytidine deaminase; Computational biology; Genome; genomic DNA; Cytosine; Genetics; Cytidine; DNA; Gene; Biochemistry; Enzyme","score_opus":0.005181607873979125,"score_gpt":0.2164771484335223,"score_spread":0.2112955405595432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044710522","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3168049,0.00048335973,0.67917717,0.000982071,0.00020992126,0.0002878348,0.00001648502,0.00003967496,0.0019985996],"genre_scores_gemma":[0.9841254,0.000015084423,0.013664631,0.00091935217,0.00091287924,0.000015796844,0.00013490331,0.00004373292,0.00016824549],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990904,0.000027236061,0.00014708609,0.00037364347,0.00014943627,0.00021219818],"domain_scores_gemma":[0.99947155,0.0000051912343,0.00004043868,0.00024563062,0.00007254648,0.00016465642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057439673,0.00018194472,0.000120573546,0.000019500769,0.00004359019,0.000027892977,0.000151638,0.000090139845,0.000041136536],"category_scores_gemma":[0.000029231962,0.0001709622,0.00007204286,0.0001045835,0.000031223593,0.000002481972,0.000058646514,0.00008498889,0.000016370223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009674084,0.000033896416,0.00008623312,0.000019136289,0.000023345747,0.000022765193,0.0000270651,0.0033443714,0.9926776,0.000012327023,0.003458096,0.00019838577],"study_design_scores_gemma":[0.00065902853,0.0004112179,0.00008923588,0.0000038996723,0.000021454098,0.0000035783066,0.000023801489,0.001415859,0.9692583,0.000003433736,0.02787661,0.00023359946],"about_ca_topic_score_codex":0.0000050035833,"about_ca_topic_score_gemma":0.000003982581,"teacher_disagreement_score":0.6673205,"about_ca_system_score_codex":0.000008036627,"about_ca_system_score_gemma":0.00008133785,"threshold_uncertainty_score":0.69716364},"labels":[],"label_agreement":null},{"id":"W3047205783","doi":"10.1016/j.molcel.2020.07.010","title":"Genome-Wide Screens Reveal that Resveratrol Induces Replicative Stress in Human Cells","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Sirtuins and Resveratrol in Medicine","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; Hôpital Maisonneuve-Rosemont; Université de Montréal; McGill University; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Resveratrol; Biology; DNA damage; Genetic screen; Pterostilbene; Sirtuin; Genetics; Acetylation; Ribonucleotide reductase; Cell biology; Gene; Histone deacetylase; Histone; DNA; Biochemistry; Protein subunit","score_opus":0.02247901854479986,"score_gpt":0.2623387495918175,"score_spread":0.23985973104701766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047205783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9750622,0.0014893016,0.00045353503,0.00498796,0.000060322,0.00073124346,0.000013206955,0.00006727214,0.017134992],"genre_scores_gemma":[0.9918778,0.00008866902,0.00064753735,0.0061439965,0.0002516167,0.00002944365,0.00009220869,0.000056996105,0.0008117541],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99794614,0.0001257321,0.0003856825,0.00063993013,0.00047982647,0.00042270694],"domain_scores_gemma":[0.9987793,0.000045527067,0.00013208772,0.0005773253,0.000078043,0.0003877106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020840816,0.00027456097,0.0005132913,0.00013722159,0.0000785764,0.000025591262,0.0002359507,0.00017818078,0.00016957133],"category_scores_gemma":[0.00006885592,0.00023130211,0.00014714444,0.00035854883,0.00011604787,0.000045628036,0.00010706917,0.0006356089,0.000057751018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013609696,0.00017141626,0.012015699,0.0001193641,0.0000532092,0.0016198796,0.0008213095,0.00013562196,0.98319334,0.00002224055,0.0015118868,0.0001999613],"study_design_scores_gemma":[0.0035285896,0.001150886,0.017477486,0.00014374279,0.0001285104,0.000008486549,0.00087169535,0.00012623637,0.96775955,0.00003400924,0.008455404,0.00031542793],"about_ca_topic_score_codex":0.0000747842,"about_ca_topic_score_gemma":0.0000075394055,"teacher_disagreement_score":0.016815612,"about_ca_system_score_codex":0.000067865694,"about_ca_system_score_gemma":0.000075925265,"threshold_uncertainty_score":0.94322264},"labels":[],"label_agreement":null},{"id":"W3077605905","doi":"10.1016/j.molcel.2020.08.001","title":"Structural Basis of the Activation of Heterotrimeric Gs-Protein by Isoproterenol-Bound β1-Adrenergic Receptor","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Institute on Drug Abuse; National Institutes of Health; National Cancer Institute; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research","keywords":"Heterotrimeric G protein; Biology; Helix (gastropod); Contractility; Receptor; Cell biology; G protein; G protein-coupled receptor; Regulator; Adrenergic receptor; Biophysics; Protein structure; Biochemistry; Endocrinology; Gene","score_opus":0.008269874856863866,"score_gpt":0.1963895758624705,"score_spread":0.18811970100560663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3077605905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939872,0.00046653443,0.004679916,0.00016106368,0.00006575791,0.00030248627,0.000026482307,0.0000058004566,0.00030476754],"genre_scores_gemma":[0.9984744,0.000011246396,0.0009982244,0.00023144252,0.000048955262,0.000013809146,0.0000659992,0.000026554828,0.00012934807],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989937,0.000095626434,0.00026337747,0.0002849811,0.00020194269,0.00016038715],"domain_scores_gemma":[0.9993396,0.000003361863,0.00023184958,0.00029283634,0.00007205308,0.00006031864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059125632,0.00015965405,0.00018018315,0.000017726712,0.000047632217,0.000012736745,0.00028550738,0.00013019588,0.00018834861],"category_scores_gemma":[0.000033171305,0.00012659667,0.00017711562,0.00015506867,0.000058577443,0.0000042726374,0.00011691014,0.000091053,0.000002609608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055151108,0.000016899043,0.00005670439,0.00004434658,0.000030431742,2.4793937e-7,0.000060513037,0.00023628295,0.99849117,0.000023253384,0.00023623192,0.00074874674],"study_design_scores_gemma":[0.0003578545,0.00027904857,0.000016406573,0.000016709908,0.000014773998,3.977337e-7,0.000041644926,0.00015435822,0.9974209,0.000041704963,0.0015192408,0.00013692722],"about_ca_topic_score_codex":0.000049323666,"about_ca_topic_score_gemma":4.7263802e-7,"teacher_disagreement_score":0.0044872286,"about_ca_system_score_codex":0.000008382707,"about_ca_system_score_gemma":0.000042145137,"threshold_uncertainty_score":0.51624626},"labels":[],"label_agreement":null},{"id":"W3086729742","doi":"10.1016/j.molcel.2020.08.014","title":"Processive Activity of Replicative DNA Polymerases in the Replisome of Live Eukaryotic Cells","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Canada Foundation for Innovation","keywords":"Replisome; Biology; Okazaki fragments; DNA replication; Cell biology; DNA polymerase; Pre-replication complex; Genetics; Saccharomyces cerevisiae; Eukaryotic DNA replication; DNA; Gene","score_opus":0.009103390506665157,"score_gpt":0.22512921501326882,"score_spread":0.21602582450660368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3086729742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99571764,0.00072141545,0.0011991851,0.00023945307,0.000019194804,0.00039238678,0.00002541265,0.0000072127023,0.0016780738],"genre_scores_gemma":[0.9988737,0.00004429132,0.00045571185,0.0004819642,0.000022152946,0.00003106913,0.000017166825,0.000021622822,0.00005233561],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881804,0.00016551379,0.00023422479,0.00041600998,0.0001929888,0.00017319685],"domain_scores_gemma":[0.99903524,0.000025153198,0.00024906808,0.0005608147,0.00007696098,0.00005275713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001384639,0.00015255266,0.00021859216,0.000029420144,0.000017622147,0.0000057480515,0.00038041393,0.00010321173,0.000011608492],"category_scores_gemma":[0.00011270789,0.00012634399,0.00012742881,0.00020770077,0.00009243992,0.0000039270208,0.00013650877,0.00010608587,0.0000055255678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105472755,0.00017109507,0.00013516839,0.00010865185,0.00002334515,0.000021167845,0.00066019146,0.000047807014,0.9981983,0.00003708558,0.00011879631,0.00037296803],"study_design_scores_gemma":[0.00033798258,0.0007012667,0.00021039014,0.000015435035,0.00002625157,0.0000022645695,0.00035117537,0.00007176259,0.9979206,0.0000616733,0.00017788695,0.00012334804],"about_ca_topic_score_codex":0.00002706879,"about_ca_topic_score_gemma":0.0000033476872,"teacher_disagreement_score":0.0031560196,"about_ca_system_score_codex":0.0000066764223,"about_ca_system_score_gemma":0.00008537285,"threshold_uncertainty_score":0.5152158},"labels":[],"label_agreement":null},{"id":"W3092520164","doi":"10.1016/j.molcel.2020.09.028","title":"H3 K27M and EZHIP Impede H3K27-Methylation Spreading by Inhibiting Allosterically Stimulated PRC2","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":146,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"National Center for Research Resources; National Institute of General Medical Sciences; Greater Milwaukee Foundation; Childhood Brain Tumor Foundation; Rally Foundation; Sidney Kimmel Foundation for Cancer Research; National Cancer Institute","keywords":"Histone H3; Biology; PRC2; Chromatin; Lysine; Cell biology; Histone; Methylation; CpG site; Methyltransferase; Drosophila melanogaster; Biochemistry; DNA methylation; Amino acid; DNA; Gene expression; Gene","score_opus":0.008420176058249884,"score_gpt":0.22405437355479715,"score_spread":0.21563419749654728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092520164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94613266,0.0031808312,0.048022088,0.00036960375,0.00003477206,0.00023297177,0.000014268614,0.00002845116,0.0019843453],"genre_scores_gemma":[0.99678916,0.00019955855,0.0018141133,0.0006575534,0.00008314755,0.000007730572,0.00030734,0.000047094272,0.00009429015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870974,0.000105471576,0.0002734392,0.0004878363,0.0001646382,0.00025886862],"domain_scores_gemma":[0.9994123,0.000018468572,0.00012058631,0.0001676569,0.00008723012,0.00019376035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015310591,0.00020225532,0.00016271399,0.000028638207,0.000078583966,0.00006530706,0.00010591255,0.00018576396,0.00001536454],"category_scores_gemma":[0.00015790632,0.00021874206,0.00006347711,0.00014540984,0.000040038278,0.0000062859503,0.00014636765,0.00011889829,0.0000101944415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036381687,0.000020962148,0.0006519775,0.00002987513,0.0000191184,0.000008005215,0.00010154925,0.00047127207,0.99531525,0.000007752854,0.00014779015,0.0031900853],"study_design_scores_gemma":[0.00056778686,0.0003125458,0.0001482777,0.000009270439,0.000022854272,0.0000010566309,0.000030780637,0.0032512734,0.988144,0.00005899533,0.0071934615,0.000259738],"about_ca_topic_score_codex":0.000014237346,"about_ca_topic_score_gemma":0.0000013605485,"teacher_disagreement_score":0.0506565,"about_ca_system_score_codex":0.000010535883,"about_ca_system_score_gemma":0.00003175282,"threshold_uncertainty_score":0.8920042},"labels":[],"label_agreement":null},{"id":"W3100601686","doi":"10.1016/j.molcel.2020.10.044","title":"Bridging a DNA Break to Leave a Poly(ADP-Ribose) Mark on Chromatin","year":2020,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research","keywords":"Chromatin; Biology; DNA; DNA damage; Nucleosome; Poly ADP ribose polymerase; Cell biology; DNA repair; Context (archaeology); Genetics; Polymerase","score_opus":0.014420237022582872,"score_gpt":0.2569893186674573,"score_spread":0.2425690816448744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3100601686","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033533294,0.0007795635,0.0053619742,0.9388052,0.00067436654,0.0013683301,0.0001671469,0.00031976277,0.049170308],"genre_scores_gemma":[0.015823176,0.000020488484,0.0014283812,0.9684006,0.006019868,0.00018334437,0.00058231107,0.0003004721,0.0072413357],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966439,0.00016827822,0.0004924327,0.0010048201,0.0009942367,0.00069633586],"domain_scores_gemma":[0.99831843,0.000059461443,0.00021472538,0.0010021519,0.000087220185,0.0003179904],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000102712766,0.00063870486,0.0008350612,0.00033438846,0.000079690464,0.00007094506,0.00031123514,0.0005381771,0.00075462024],"category_scores_gemma":[0.00004870411,0.00067202095,0.00044326246,0.00041972834,0.00006634481,0.000026310245,0.00010483594,0.0018840318,0.0026139917],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015523507,0.000049785784,0.000004086387,0.00045544872,0.00011059311,0.009754429,0.00019628867,0.0000047077865,0.12144999,0.0000034944644,0.86550725,0.0023087168],"study_design_scores_gemma":[0.0017817961,0.0004987144,0.000018730332,0.00077957776,0.00012743258,0.000102371065,0.0000079517,0.000050135473,0.23974423,0.00003970746,0.7563424,0.0005069522],"about_ca_topic_score_codex":0.000052628395,"about_ca_topic_score_gemma":7.7652453e-7,"teacher_disagreement_score":0.11829425,"about_ca_system_score_codex":0.0004695405,"about_ca_system_score_gemma":0.00026212324,"threshold_uncertainty_score":0.9995731},"labels":[],"label_agreement":null},{"id":"W3101668228","doi":"10.1016/j.molcel.2020.11.028","title":"Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":131,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; Pulmonary Fibrosis Foundation; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; National Institute on Aging; C3.ai Digital Transformation Institute; National Science Foundation; National Institutes of Health; Massachusetts Consortium on Pathogen Readiness","keywords":"Biology; Host (biology); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Coronavirus disease 2019 (COVID-19); Sars virus; 2019-20 coronavirus outbreak; Type (biology); Genetics; Ecology; Pathology; Disease; Infectious disease (medical specialty)","score_opus":0.046672032244720066,"score_gpt":0.3406889250218824,"score_spread":0.29401689277716236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3101668228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892848,0.00052210107,0.00043430156,0.0006162181,0.000072506664,0.00047362683,0.0000142616655,0.00006260742,0.008519592],"genre_scores_gemma":[0.94949716,0.000003725233,0.0005594603,0.04954522,0.000083126164,0.0000150083,0.000005720284,0.00005409465,0.00023648932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829173,0.00011257424,0.00027933432,0.0004216887,0.00052968465,0.00036501334],"domain_scores_gemma":[0.9990962,0.000043653654,0.00006245889,0.0004876006,0.0002223543,0.00008772129],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021509838,0.00018670758,0.00033696054,0.00017627074,0.00006787339,0.000023270457,0.00024638764,0.00011878572,0.000040740237],"category_scores_gemma":[0.00017082739,0.00018670231,0.00017947426,0.0006662758,0.00005923628,0.000042487398,0.00014944613,0.00026308975,0.00071020605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089180015,0.00014163034,0.0009883072,0.00017807077,0.000037069363,0.0004845069,0.000261211,0.0000013372461,0.99440897,0.000029780731,0.002457811,0.00011948154],"study_design_scores_gemma":[0.0007128954,0.00095861766,0.00034746426,0.000024515128,0.000052469346,0.000006937849,0.000057121237,0.000035021858,0.8279938,0.000015842315,0.16965282,0.00014246655],"about_ca_topic_score_codex":0.000099216275,"about_ca_topic_score_gemma":0.0000047205513,"teacher_disagreement_score":0.167195,"about_ca_system_score_codex":0.00006631046,"about_ca_system_score_gemma":0.0002830576,"threshold_uncertainty_score":0.9128499},"labels":[],"label_agreement":null},{"id":"W3107475249","doi":"10.1016/j.molcel.2020.10.038","title":"Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":141,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Cancer Institute; National Institutes of Health; Queen's University","keywords":"Biology; Gene isoform; Histone; Linker; Dynamics (music); Computational biology; Cell biology; Genetics; DNA; Gene","score_opus":0.003941980886170353,"score_gpt":0.20076881257642945,"score_spread":0.1968268316902591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107475249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99301803,0.00050255004,0.005296299,0.00014264694,0.000019087043,0.00014043042,0.000041379335,0.00000995321,0.00082962995],"genre_scores_gemma":[0.99841154,0.000032522286,0.00093033194,0.00015200958,0.00002925466,0.0000049540863,0.00031713536,0.00003734411,0.00008493813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992057,0.000017481658,0.00018976569,0.0002997759,0.00011572151,0.00017153505],"domain_scores_gemma":[0.99948496,0.0000027370047,0.00011754893,0.00024702217,0.000036813522,0.000110938476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000021378071,0.00019506985,0.00020799467,0.000019443647,0.000054445238,0.000018088085,0.00015639541,0.000102614635,0.000012354115],"category_scores_gemma":[0.0000063197153,0.0001537288,0.00006278232,0.000043536962,0.000119924225,0.0000017400823,0.00014614407,0.00008070599,6.2279287e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039609527,0.000048530932,0.00561515,0.0001762335,0.000059358044,0.000013808642,0.00011095848,0.00010232653,0.9926042,0.0008067395,0.000057487192,0.00036560977],"study_design_scores_gemma":[0.0021577692,0.0018749858,0.02648248,0.00002669491,0.00013663527,0.000028065346,0.00024024167,0.0058320393,0.9603123,0.0010006235,0.0011528874,0.0007552612],"about_ca_topic_score_codex":0.0000112904245,"about_ca_topic_score_gemma":0.000038239457,"teacher_disagreement_score":0.03229187,"about_ca_system_score_codex":0.000013619275,"about_ca_system_score_gemma":0.000022082357,"threshold_uncertainty_score":0.62688786},"labels":[],"label_agreement":null},{"id":"W3108703593","doi":"10.1016/j.molcel.2020.11.010","title":"A Role for the Mre11-Rad50-Xrs2 Complex in Gene Expression and Chromosome Organization","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of General Medical Sciences; Université de Montpellier; Institut National Du Cancer; Ligue Contre le Cancer; Cancéropôle Ile de France; Agence Nationale de la Recherche","keywords":"Biology; Rad50; Chromatin; Genetics; Transcription (linguistics); Gene; Cell biology; Transcription factor; Computational biology; DNA-binding protein","score_opus":0.006154153203340528,"score_gpt":0.19158167523713465,"score_spread":0.18542752203379412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108703593","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759539,0.00090506254,0.022164779,0.00049966946,0.000021468155,0.00030872514,0.000022447213,0.0000074015434,0.00011655637],"genre_scores_gemma":[0.9950287,0.00012269255,0.0036171062,0.00085328106,0.00006123869,0.000017604041,0.0002386583,0.0000312268,0.000029537303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993982,0.000023759894,0.00012885962,0.0002491916,0.000059224516,0.00014081666],"domain_scores_gemma":[0.99967176,0.0000076621445,0.000048843474,0.00017903857,0.000037533788,0.000055170556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000050783077,0.00010757576,0.00009109201,0.00001196324,0.00006401145,0.000029171377,0.00014849541,0.00008042332,0.000010655655],"category_scores_gemma":[0.000031110354,0.00009159024,0.00003287452,0.00007953101,0.000026862559,0.0000017218708,0.00013145621,0.00004650818,0.0000028232341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013958169,0.00002013528,0.00041644683,0.000022192491,0.0000067865694,0.0000019343383,0.00012700312,0.00079487445,0.99818265,0.000022305552,0.0002457608,0.00014594005],"study_design_scores_gemma":[0.00070476724,0.00011367711,0.0007144305,0.00000353741,0.000012819422,0.0000042806455,0.00010198676,0.012217054,0.9810397,0.000066827844,0.00488166,0.0001392643],"about_ca_topic_score_codex":0.0000049090695,"about_ca_topic_score_gemma":0.0000037294928,"teacher_disagreement_score":0.019074764,"about_ca_system_score_codex":0.000007106423,"about_ca_system_score_gemma":0.000024571777,"threshold_uncertainty_score":0.37349418},"labels":[],"label_agreement":null},{"id":"W3111131568","doi":"10.1016/j.molcel.2020.11.043","title":"Seeing Atoms: Single-Particle Cryo-EM Breaks the Atomic Barrier","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research; National Institutes of Health; Simons Foundation","keywords":"Biology; Particle (ecology); Biophysics; Ecology","score_opus":0.00660232138050237,"score_gpt":0.2506475485459078,"score_spread":0.24404522716540544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111131568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80135995,0.00247664,0.19257455,0.00092720793,0.000018107115,0.00028229004,0.000011912564,0.00006455711,0.002284802],"genre_scores_gemma":[0.9929393,0.00008519731,0.002375822,0.004129616,0.00008336495,0.000047858255,0.00003524791,0.000041441202,0.00026217545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990681,0.00003806762,0.0001580667,0.0003520055,0.00009293472,0.00029086543],"domain_scores_gemma":[0.9993936,0.0000054299944,0.000059434067,0.0003882299,0.000039250368,0.00011404615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055233195,0.00015142541,0.0000975479,0.000007408037,0.00012639033,0.000038154598,0.0002805123,0.000087280896,0.000026695621],"category_scores_gemma":[0.000016785638,0.00012926255,0.00010377314,0.0001298433,0.00005287864,0.000004108905,0.000132305,0.00012982992,0.00004257044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016564525,0.000026683654,0.00006122273,0.0000061885735,0.000008945397,0.0000035489797,0.000058489244,0.00007241708,0.99707556,0.00041015056,0.00114089,0.0011193274],"study_design_scores_gemma":[0.0001569522,0.000109245586,0.000009056271,0.00000219471,0.0000138000905,0.000004394427,0.000046097408,0.0003100784,0.8054946,0.00016479046,0.1935523,0.000136498],"about_ca_topic_score_codex":0.000002654632,"about_ca_topic_score_gemma":0.00000249463,"teacher_disagreement_score":0.19241141,"about_ca_system_score_codex":0.000014103429,"about_ca_system_score_gemma":0.000033471933,"threshold_uncertainty_score":0.5271174},"labels":[],"label_agreement":null},{"id":"W3111684381","doi":"10.1016/j.molcel.2020.11.036","title":"Mitochondrial Threonyl-tRNA Synthetase TARS2 Is Required for Threonine-Sensitive mTORC1 Activation","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; University of Toronto; McGill University; Lunenfeld-Tanenbaum Research Institute; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"mTORC1; Biology; GTPase; Cell biology; Threonine; Transfer RNA; GTP'; Amino acid; Biochemistry; Cytoplasm; Mitochondrion; Signal transduction; Phosphorylation; Enzyme; Gene; Serine; RNA; PI3K/AKT/mTOR pathway","score_opus":0.015948800515955017,"score_gpt":0.2484621366591712,"score_spread":0.23251333614321618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111684381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61226976,0.0010633807,0.37702832,0.003002403,0.0007821919,0.0015275661,0.0003644361,0.0000995693,0.003862359],"genre_scores_gemma":[0.9871419,0.000029682884,0.0057415706,0.005211241,0.00095680275,0.00009632327,0.0003921977,0.000096989,0.00033330385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824065,0.0000755905,0.00028673612,0.00075313094,0.00025346148,0.00039042253],"domain_scores_gemma":[0.99896574,0.0000303108,0.00017213501,0.00045679483,0.00018976761,0.00018523479],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009059949,0.00030537322,0.00025591027,0.000035272533,0.0001029531,0.00004629787,0.00027341428,0.0002661581,0.000051761464],"category_scores_gemma":[0.00019077379,0.0003263168,0.00028302337,0.00013295405,0.00007981263,0.000009476941,0.00011143933,0.00013744987,0.00004104133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005290303,0.00004751837,0.000017258226,0.0000470297,0.00009525602,0.000015935138,0.00016152851,0.00033686974,0.9831921,0.0000613435,0.014887954,0.00060817896],"study_design_scores_gemma":[0.001285534,0.00049970514,0.000006401345,0.00002004951,0.00006593452,0.000002632089,0.0000455614,0.0005736819,0.925378,0.000120708515,0.07164152,0.0003602515],"about_ca_topic_score_codex":0.000016243024,"about_ca_topic_score_gemma":0.000002148671,"teacher_disagreement_score":0.37487212,"about_ca_system_score_codex":0.00004192394,"about_ca_system_score_gemma":0.00015004746,"threshold_uncertainty_score":0.9999189},"labels":[],"label_agreement":null},{"id":"W3112014125","doi":"10.1016/j.molcel.2020.11.011","title":"The Smc5/6 Core Complex Is a Structure-Specific DNA Binding and Compacting Machine","year":2020,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Ottawa","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Genome; DNA; Chromosome; Effector; Cell biology; Genetics; Gene; ATP hydrolysis; Computational biology; ATPase; Biochemistry; Enzyme","score_opus":0.023391442567705353,"score_gpt":0.23447167516009687,"score_spread":0.2110802325923915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112014125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933568,0.001611444,0.0024746167,0.00072645803,0.000084820036,0.00022351841,0.00005693398,0.000030206756,0.0014352037],"genre_scores_gemma":[0.9960869,0.000094487135,0.0018339419,0.0016298046,0.00008426593,0.0000036253539,0.00010802659,0.000043110645,0.00011583611],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988947,0.000054178512,0.00017918494,0.00041708216,0.00016701204,0.00028782606],"domain_scores_gemma":[0.99936986,0.0000143164625,0.00009270522,0.0003354758,0.00003521998,0.00015244885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008573469,0.00020160893,0.00014987208,0.000017064971,0.00021865456,0.00008354461,0.00025180765,0.00009754696,0.000048079804],"category_scores_gemma":[0.000026261281,0.00016381351,0.00008557724,0.0000967192,0.00007471413,0.0000024135347,0.00023583487,0.00014725333,0.000013435771],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040144212,0.000008144235,0.00020878272,0.000017062222,0.000028491582,0.000020026824,0.00012739627,0.0000120749155,0.996292,0.0001416218,0.0017991338,0.001305116],"study_design_scores_gemma":[0.00045834985,0.00015239102,0.00008283532,0.000004415315,0.000015276759,0.000016143193,0.00013327891,0.0017128701,0.89662045,0.00010069871,0.1005001,0.000203162],"about_ca_topic_score_codex":0.0000045056745,"about_ca_topic_score_gemma":0.000003844197,"teacher_disagreement_score":0.09967153,"about_ca_system_score_codex":0.000009615056,"about_ca_system_score_gemma":0.000018494622,"threshold_uncertainty_score":0.66801214},"labels":[],"label_agreement":null},{"id":"W3118904292","doi":"10.1016/j.molcel.2020.12.011","title":"A phage-encoded anti-activator inhibits quorum sensing in Pseudomonas aeruginosa","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":163,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Canada Foundation for Innovation","keywords":"Quorum sensing; Pilus; Biology; Pseudomonas aeruginosa; Bacteriophage; Bacteria; Pilin; Microbiology; Activator (genetics); Cell biology; Genetics; Biofilm; Escherichia coli; Gene","score_opus":0.005563795648175261,"score_gpt":0.20995389942702564,"score_spread":0.20439010377885036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118904292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97868496,0.00006730927,0.0014957886,0.00051269855,0.00019061545,0.00010814608,0.0000059324757,0.000029069795,0.018905502],"genre_scores_gemma":[0.9947911,0.000016451559,0.0030195743,0.00094702485,0.00001683333,0.000002283056,0.000014836403,0.0000223451,0.001169574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889463,0.00008292645,0.00019799499,0.00037445116,0.00012717706,0.00032284347],"domain_scores_gemma":[0.9995714,0.000015560056,0.00005588791,0.00026138997,0.000009674183,0.00008610442],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006864306,0.00014908123,0.00015844949,0.000035272667,0.00007315904,0.000059889,0.00008963843,0.00007409872,0.0014087607],"category_scores_gemma":[0.00001801992,0.0001642317,0.00008950903,0.00032104267,0.000052239786,0.00016320775,0.00020265297,0.00020694197,0.00058234844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000039314905,0.000111047244,0.00044813048,0.0000062088793,0.000004147995,0.0007079368,0.00015281672,0.00020579682,0.99621296,0.0000046494815,0.00045381088,0.0016885881],"study_design_scores_gemma":[0.00033486466,0.0000122175725,0.004947228,0.000023321209,0.000008224038,0.00006757813,0.000088253066,0.00021339186,0.9805356,0.000025405458,0.013558294,0.00018558041],"about_ca_topic_score_codex":0.0003708964,"about_ca_topic_score_gemma":0.00016733696,"teacher_disagreement_score":0.017735928,"about_ca_system_score_codex":0.00012667943,"about_ca_system_score_gemma":0.000022597998,"threshold_uncertainty_score":0.9995041},"labels":[],"label_agreement":null},{"id":"W3119695715","doi":"10.1016/j.molcel.2020.12.010","title":"CARM1 regulates replication fork speed and stress response by stimulating PARP1","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Montréal; Centre hospitalier universitaire de Québec","funders":"National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council; Fonds de Recherche du Québec - Santé; National Cancer Institute; National Institutes of Health; Cancer Research UK; Wellcome Trust","keywords":"Biology; PARP1; DNA replication; Fork (system call); Cell biology; Replication (statistics); DNA damage; Genetics; DNA; Poly ADP ribose polymerase; Polymerase; Computer science; Virology","score_opus":0.005927424538897505,"score_gpt":0.23218232398015295,"score_spread":0.22625489944125546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119695715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99356925,0.0023474086,0.0026934913,0.00021046694,0.00004737988,0.00016028227,0.000042384465,0.000027905415,0.0009014452],"genre_scores_gemma":[0.9933857,0.000044032677,0.0034951428,0.00033591336,0.000027364882,0.000009553585,0.0004047611,0.000039837043,0.0022577127],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864966,0.00017626272,0.00018186167,0.0006309324,0.00013787745,0.00022338834],"domain_scores_gemma":[0.9988834,0.000020414831,0.000075420634,0.0008326524,0.00009329111,0.00009478004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025256764,0.00015000938,0.0001274697,0.000021137608,0.00006899943,0.00004366582,0.00010876411,0.00015407043,0.000010646157],"category_scores_gemma":[0.00019774718,0.00017596161,0.00006847983,0.00008766149,0.000034696157,0.0000032563853,0.00016532066,0.00007062409,0.0000049326513],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010538237,0.000042047337,0.00045408506,0.000020589956,0.000020817786,0.00003572791,0.000032266595,0.00015275658,0.9973403,0.000027081041,0.0006224975,0.0011464265],"study_design_scores_gemma":[0.00044565304,0.00013845258,0.0002752337,0.00001472329,0.000021749369,0.000016074911,0.00006527422,0.0005166385,0.9877992,0.00010482893,0.010404283,0.00019786929],"about_ca_topic_score_codex":0.0000066155176,"about_ca_topic_score_gemma":0.0000023912853,"teacher_disagreement_score":0.009781785,"about_ca_system_score_codex":0.000013748336,"about_ca_system_score_gemma":0.000050677565,"threshold_uncertainty_score":0.71755064},"labels":[],"label_agreement":null},{"id":"W3122065046","doi":"10.1016/j.molcel.2020.12.027","title":"XerD unloads bacterial SMC complexes at the replication terminus","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Indiana University","keywords":"Recombinase; Biology; Condensin; Bacillus subtilis; Chromosome segregation; Chromosome; Cell biology; Ter protein; DNA; Holliday junction; DNA replication; Genetics; Recombination; Origin of replication; Homologous recombination; Bacteria; Gene","score_opus":0.00733967155098859,"score_gpt":0.22101630543095696,"score_spread":0.21367663387996838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3122065046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99318963,0.0009892118,0.00045582643,0.0012548718,0.00032058492,0.0001578384,0.000040270013,0.000019361167,0.003572389],"genre_scores_gemma":[0.99418044,0.00018285896,0.0006094392,0.0008098035,0.00022148486,0.000024411029,0.00081710547,0.00002980899,0.0031246669],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987883,0.000094135605,0.00020048767,0.0005515423,0.00010996759,0.00025557328],"domain_scores_gemma":[0.99854285,0.0000062430813,0.00008646393,0.0012211244,0.0000883086,0.00005502445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011186704,0.00016593073,0.00013169604,0.000018062487,0.00012624946,0.0000486698,0.00028470444,0.00026226646,0.00017337075],"category_scores_gemma":[0.00004296451,0.00013615545,0.00011829372,0.000102463026,0.00013040702,0.0000012864709,0.00046410924,0.000090869355,0.00006171826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003849978,0.00004477551,0.00006949814,0.000008054848,0.0000212146,0.000030167968,0.000009050236,0.000005749567,0.9929738,0.000067572306,0.0030825988,0.0036490383],"study_design_scores_gemma":[0.00024339615,0.00007579625,0.00026032858,0.0000019890283,0.000015991007,0.00004614778,0.0000081630815,0.0000044988487,0.6485116,0.0000543072,0.35065922,0.000118576914],"about_ca_topic_score_codex":0.000011401915,"about_ca_topic_score_gemma":0.000049644834,"teacher_disagreement_score":0.34757662,"about_ca_system_score_codex":0.000017553786,"about_ca_system_score_gemma":0.000087159744,"threshold_uncertainty_score":0.5552258},"labels":[],"label_agreement":null},{"id":"W3123961566","doi":"10.1016/j.molcel.2020.12.044","title":"Food for Growth: Distinct Nutrient Preferences between Primary Tumors and Metastases","year":2021,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Fonds de Recherche du Québec - Santé; Canada Research Chairs","keywords":"Biology; Primary (astronomy); Nutrient; Cancer research; Internal medicine; Computational biology; Biotechnology; Ecology","score_opus":0.014983470795642658,"score_gpt":0.2201829377331914,"score_spread":0.20519946693754873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123961566","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55875283,0.30660906,0.040861167,0.058019806,0.005506408,0.005881694,0.01409677,0.00016363383,0.010108641],"genre_scores_gemma":[0.3373196,0.010465927,0.014845936,0.45274305,0.054195292,0.002316583,0.11491621,0.0010907392,0.012106621],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976205,0.0001543171,0.0003741553,0.0010190099,0.0002999902,0.0005320086],"domain_scores_gemma":[0.99884874,0.00004902927,0.00022480774,0.0005706743,0.00017934412,0.00012742862],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015432452,0.00051358034,0.00066152774,0.00008504547,0.00010258024,0.00009733482,0.00033263696,0.00061237323,0.0000144231435],"category_scores_gemma":[0.00007868366,0.00050346315,0.0003812887,0.00009564068,0.00013344275,0.0000040213117,0.00028446116,0.0004297295,0.0000022574068],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008035564,0.0000988819,0.00023216548,0.001943267,0.00066226575,0.000071754555,0.000040288152,0.0000010763032,0.12297505,0.000037974758,0.87004435,0.0038125694],"study_design_scores_gemma":[0.00067289715,0.00042029374,0.00012521718,0.000045419565,0.00041366927,0.000010479868,0.000010351574,2.793527e-7,0.21464983,0.0002910271,0.78286177,0.0004987859],"about_ca_topic_score_codex":0.000022046566,"about_ca_topic_score_gemma":0.000008749078,"teacher_disagreement_score":0.39472327,"about_ca_system_score_codex":0.000020546328,"about_ca_system_score_gemma":0.0002714634,"threshold_uncertainty_score":0.9997417},"labels":[],"label_agreement":null},{"id":"W3131890270","doi":"10.1016/j.molcel.2021.01.030","title":"microRNA-induced translational control of antiviral immunity by the cap-binding protein 4EHP","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Jewish General Hospital; Christie (Canada); Children's Hospital of Eastern Ontario; McGill University; Occupational Cancer Research Centre","funders":"Medical Research Council; Canadian Institutes of Health Research; Terry Fox Research Institute","keywords":"Biology; Gene silencing; microRNA; Cell biology; Messenger RNA; Translation (biology); Viral replication; Downregulation and upregulation; Interferon; RNA interference; Virus; RNA; Virology; Genetics; Gene","score_opus":0.007688551285005734,"score_gpt":0.21632119290425525,"score_spread":0.20863264161924952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131890270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896027,0.0049592615,0.0013776083,0.0005259623,0.00015606533,0.0002391852,0.00007262829,0.00001550901,0.0030510868],"genre_scores_gemma":[0.99427426,0.0000074936097,0.000033603057,0.0001549163,0.00000420765,0.000013589469,0.00011666472,0.000015084094,0.0053801998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986074,0.00069623697,0.0002496847,0.00016522319,0.00004267525,0.00023877788],"domain_scores_gemma":[0.9994436,0.00008037553,0.0000953985,0.00028328274,0.00008840738,0.000008948947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002140186,0.00013781998,0.00021330938,0.000038489456,0.00013869045,0.000013232979,0.00020952211,0.0001537997,0.0003837851],"category_scores_gemma":[0.00004194015,0.00010959627,0.00016503643,0.000098318225,0.00012509713,0.000033183253,0.000037931946,0.00032328183,0.00012409892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020929083,0.00013227965,0.000055323137,0.000013948929,0.00011980677,0.000012860182,0.00020494703,6.247514e-7,0.99784935,0.00025446212,0.00031705116,0.0008300351],"study_design_scores_gemma":[0.0015677775,0.00010286698,0.00013524349,0.00002272157,0.000035123405,0.000024078856,0.00019673487,0.000003317534,0.98799855,0.000020542271,0.009776144,0.000116929776],"about_ca_topic_score_codex":0.00006589403,"about_ca_topic_score_gemma":0.0000040930345,"teacher_disagreement_score":0.00985085,"about_ca_system_score_codex":0.000012615386,"about_ca_system_score_gemma":0.00011022584,"threshold_uncertainty_score":0.44692063},"labels":[],"label_agreement":null},{"id":"W3132000107","doi":"10.1016/j.molcel.2021.01.038","title":"DNA hypomethylating agents increase activation and cytolytic activity of CD8+ T cells","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Princess Margaret Cancer Centre; University of Toronto; Centre Hospitalier de l’Université de Montréal; University Health Network","funders":"Instituto de Salud Carlos III; Canadian Institutes of Health Research; Terry Fox Research Institute; Ontario Institute for Cancer Research; Fundação de Amparo à Pesquisa do Estado de São Paulo; Natural Sciences and Engineering Research Council of Canada; European Regional Development Fund; Breast Cancer Research Foundation; Princess Margaret Cancer Foundation; European Commission; Canadian Cancer Society; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Albert Einstein Cancer Center","keywords":"Biology; Cytolysis; Cytotoxic T cell; DNA; CD8; Cancer research; Molecular biology; Virology; Cell biology; Immunology; Biochemistry; Immune system; In vitro","score_opus":0.010496163774317042,"score_gpt":0.2391530267311409,"score_spread":0.22865686295682386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132000107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9833581,0.00075527997,0.012213437,0.000030873038,0.0000482065,0.000103912105,0.000008793429,0.0000052324463,0.0034761738],"genre_scores_gemma":[0.99716175,0.00016884676,0.0021355094,0.0000643068,0.000038369533,0.000004698715,0.0000616278,0.000021990209,0.00034288137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990871,0.00012924752,0.00016581785,0.00031235866,0.00014915476,0.00015630403],"domain_scores_gemma":[0.99936795,0.000021992098,0.00012569704,0.00029442974,0.00011077947,0.00007913312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015748285,0.00012799274,0.00013945953,0.000041753206,0.000038053702,0.000019597035,0.00006466966,0.00012767236,0.000013998812],"category_scores_gemma":[0.000108328655,0.00014386747,0.00006972,0.00012512218,0.000036969534,0.0000046756795,0.00012326852,0.00006931016,0.0000022056786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020272737,0.00008090661,0.0006128212,0.000051758954,0.000021048692,0.000008290276,0.000029428049,0.0001843509,0.9945888,0.000010863954,0.000023124305,0.0043683406],"study_design_scores_gemma":[0.00040368654,0.00008925685,0.0019930564,0.0000116229585,0.000024434956,8.674062e-7,0.000021226322,0.00030183472,0.99567306,0.00011558946,0.0012222562,0.00014312257],"about_ca_topic_score_codex":0.000029163572,"about_ca_topic_score_gemma":0.0000038504704,"teacher_disagreement_score":0.013803678,"about_ca_system_score_codex":0.000010350923,"about_ca_system_score_gemma":0.0000666658,"threshold_uncertainty_score":0.5866745},"labels":[],"label_agreement":null},{"id":"W3134944368","doi":"10.1016/j.molcel.2021.01.032","title":"PQBP1 promotes translational elongation and regulates hippocampal mGluR-LTD by suppressing eEF2 phosphorylation","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Nanjing University; Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Biology; Elongation factor; Phosphorylation; Cell biology; Translational frameshift; Translational regulation; Metabotropic glutamate receptor; Translation (biology); Biochemistry; Ribosome; RNA; Glutamate receptor; Messenger RNA; Receptor","score_opus":0.003985770282424572,"score_gpt":0.1949893883373667,"score_spread":0.19100361805494212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134944368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99029434,0.004253186,0.0037306913,0.00034314464,0.000060157745,0.00013098403,0.000019082448,0.000010461789,0.0011579343],"genre_scores_gemma":[0.995116,0.00015982625,0.0029501389,0.00023179885,0.000011580701,0.000009886575,0.0010200934,0.000027901455,0.00047279245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904764,0.000058876376,0.000165538,0.00039330655,0.00015383765,0.00018081086],"domain_scores_gemma":[0.99964577,0.000006099769,0.000050485116,0.00016143109,0.00006929945,0.00006689698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006400469,0.00015108124,0.000091944494,0.000021993808,0.00010065392,0.00005899566,0.000062737556,0.00011524078,0.000033902015],"category_scores_gemma":[0.000018379389,0.00017250562,0.000051123043,0.00007922579,0.000048371057,0.000005344483,0.00004900819,0.000062869534,0.0000038153253],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016950282,0.00005936616,0.0008547908,0.000022179529,0.00001549729,0.0000056269473,0.00006928856,0.00008684002,0.994953,0.000015500611,0.00048673546,0.0034142463],"study_design_scores_gemma":[0.0005484531,0.000047825193,0.008120383,0.000008881483,0.000016095017,0.000009326979,0.00003577205,0.00033795054,0.98394185,0.00038533952,0.006341997,0.0002060975],"about_ca_topic_score_codex":0.0000031932032,"about_ca_topic_score_gemma":0.000005652057,"teacher_disagreement_score":0.0110111,"about_ca_system_score_codex":0.000005422265,"about_ca_system_score_gemma":0.00006321785,"threshold_uncertainty_score":0.7034575},"labels":[],"label_agreement":null},{"id":"W3157600695","doi":"10.1016/j.molcel.2021.04.017","title":"ecDNA party bus: Bringing the enhancer to you","year":2021,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health; Banting Research Foundation","keywords":"Extrachromosomal DNA; Biology; Enhancer; Chromatin; DNA; Genetics; Gene; Transcription factor; Molecular biology; Genome","score_opus":0.004921206274725312,"score_gpt":0.1976036287272999,"score_spread":0.19268242245257458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157600695","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52435035,0.014520522,0.02776596,0.3817973,0.0027652762,0.0017287619,0.00032856208,0.000084595136,0.04665864],"genre_scores_gemma":[0.10481021,0.0004454971,0.0029048277,0.8519131,0.0036250101,0.00015262948,0.002962494,0.00032581517,0.03286045],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99806285,0.000103232764,0.00028331755,0.0007478669,0.00025869414,0.00054403534],"domain_scores_gemma":[0.9984619,0.000010341493,0.00012714704,0.0012196221,0.00010231543,0.00007865911],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013895037,0.00039499585,0.0002716666,0.000042667372,0.000116561845,0.00013322294,0.0006492058,0.0006079674,0.000088844055],"category_scores_gemma":[0.000029202554,0.00034444666,0.00030820203,0.000116927906,0.000046967627,0.0000010760798,0.00049926253,0.0006365945,0.00009027765],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000034008858,0.000015541229,0.0000053420467,0.00007505583,0.000076660515,0.0003795466,0.000045084773,0.00032463376,0.48910657,0.0000033397494,0.50954795,0.00041685617],"study_design_scores_gemma":[0.00011588894,0.00004578992,0.000005740728,0.000025768244,0.00005092221,0.000019560182,0.000022015633,0.00008601074,0.23916046,0.000022355769,0.7600776,0.00036788508],"about_ca_topic_score_codex":0.000019919926,"about_ca_topic_score_gemma":0.000013845144,"teacher_disagreement_score":0.47011575,"about_ca_system_score_codex":0.000038298167,"about_ca_system_score_gemma":0.00014935693,"threshold_uncertainty_score":0.99990076},"labels":[],"label_agreement":null},{"id":"W3158401410","doi":"10.1016/j.molcel.2021.04.007","title":"The oxidoreductase PYROXD1 uses NAD(P)+ as an antioxidant to sustain tRNA ligase activity in pre-tRNA splicing and unfolded protein response","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Boehringer Ingelheim Stiftung; Medizinische Universität Wien; Ministarstvo Prosvete, Nauke i Tehnološkog Razvoja; Austrian Science Fund; Boehringer Ingelheim Fonds; Institute of Physics Belgrade","keywords":"Biology; Transfer RNA; RNA splicing; DNA ligase; Oxidoreductase; NAD+ kinase; RNA ligase; Biochemistry; Enzyme; RNA; Gene","score_opus":0.0054999263512955695,"score_gpt":0.2573851389672958,"score_spread":0.2518852126160002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158401410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99590456,0.0012646101,0.0009944784,0.001085049,0.000042386877,0.000519616,0.000014963928,0.00001128848,0.00016303307],"genre_scores_gemma":[0.99743634,0.0001267731,0.0005666217,0.00032068172,0.000039809744,0.00012304919,0.0000177119,0.00003295286,0.0013360623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983627,0.00039631472,0.00019802367,0.00054386695,0.00015974848,0.00033935485],"domain_scores_gemma":[0.99889725,0.000019766427,0.000069964255,0.0007326566,0.00010940391,0.00017098323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046841594,0.00018776936,0.0001442375,0.000055142857,0.00017026834,0.000121693796,0.00019374104,0.00011354333,0.000005918048],"category_scores_gemma":[0.0002109663,0.00016592367,0.00006324361,0.00024031084,0.00007367503,0.000010354,0.00014834115,0.0001284578,0.000003910434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073929847,0.00015219538,0.00012149223,0.000018719908,0.000014641812,0.00014409058,0.00014763986,0.00012777481,0.99418265,0.00010200508,0.0000789287,0.00417057],"study_design_scores_gemma":[0.0005244274,0.0002630306,0.0042228377,0.000023836803,0.000012017567,0.000015252153,0.0003188822,0.000068177214,0.983953,0.0001308972,0.010245315,0.00022233675],"about_ca_topic_score_codex":0.00028240297,"about_ca_topic_score_gemma":0.00024398498,"teacher_disagreement_score":0.010229654,"about_ca_system_score_codex":0.000043094744,"about_ca_system_score_gemma":0.00032736865,"threshold_uncertainty_score":0.6766171},"labels":[],"label_agreement":null},{"id":"W3158623004","doi":"10.1016/j.molcel.2021.04.012","title":"Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Sinai Health System; Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Fonds de Recherche du Québec - Santé; Canada Foundation for Innovation; Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research; Government of Ontario","keywords":"Interactome; Biology; Proteostasis; Chaperone (clinical); Ciliogenesis; Computational biology; Biotinylation; Proteomics; Cell biology; Hsp70; Function (biology); Genetics; Heat shock protein; Molecular biology; Gene","score_opus":0.014682055893815204,"score_gpt":0.2611743831444179,"score_spread":0.24649232725060266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158623004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907212,0.0007149495,0.006751977,0.00008272886,0.00012479995,0.00022893192,0.000010396625,0.0000037205627,0.0013612577],"genre_scores_gemma":[0.99855024,0.000024873476,0.00069924176,0.00006330744,0.00008551104,0.000014789961,0.00015031108,0.000017841512,0.00039386516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988376,0.00020972326,0.0002452909,0.0002428891,0.00027503094,0.00018946387],"domain_scores_gemma":[0.9990801,0.000013574408,0.00010194822,0.0004478485,0.0003153295,0.000041178682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072995346,0.00010820396,0.00014660547,0.000025754589,0.00007612635,0.000009854634,0.00017057554,0.000105829036,0.00004817552],"category_scores_gemma":[0.000029915176,0.00008797696,0.00015502465,0.00016014637,0.00007374673,0.0000023058853,0.00028268032,0.00011633876,0.0000026369253],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002160176,0.00008984416,0.0018623271,0.00008144696,0.000054728192,0.000005505241,0.000016121783,0.0006611271,0.9965524,0.0004572681,0.00013019674,0.000067419816],"study_design_scores_gemma":[0.000380043,0.00007217262,0.0071500577,0.000030633153,0.000015168534,0.0000032479873,0.000020760153,0.00006334334,0.9892967,0.00015844216,0.0027265805,0.00008284762],"about_ca_topic_score_codex":0.00000948664,"about_ca_topic_score_gemma":0.00000767131,"teacher_disagreement_score":0.007829021,"about_ca_system_score_codex":0.000015382868,"about_ca_system_score_gemma":0.00010361058,"threshold_uncertainty_score":0.3587596},"labels":[],"label_agreement":null},{"id":"W3159215495","doi":"10.1016/j.molcel.2021.04.018","title":"Timer-based proteomic profiling of the ubiquitin-proteasome system reveals a substrate receptor of the GID ubiquitin ligase","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"H2020 European Research Council; National Human Genome Research Institute; Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft; Horizon 2020 Framework Programme; FP7 Coherent Development of Research Policies; National Institutes of Health; European Molecular Biology Organization","keywords":"Degron; Deubiquitinating enzyme; Biology; Ubiquitin; Ubiquitin ligase; Proteasome; Ubiquitin-Protein Ligases; Cell biology; Saccharomyces cerevisiae; Protein degradation; Proteome; Ubiquitin-conjugating enzyme; Biochemistry; Yeast; Gene","score_opus":0.008935202021180184,"score_gpt":0.21074877514172888,"score_spread":0.2018135731205487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159215495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99249315,0.0014217545,0.0006107037,0.00025514164,0.00020382609,0.0015244166,0.0001713084,0.00002011625,0.0032995539],"genre_scores_gemma":[0.9961871,0.000011895186,0.0023755694,0.00025846227,0.000088416076,0.00018818925,0.000065642926,0.000060851635,0.0007638908],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99738985,0.0006665991,0.0006034043,0.000534688,0.00040291392,0.0004025468],"domain_scores_gemma":[0.9976952,0.000019878506,0.00054001383,0.0013087678,0.0003404697,0.000095648815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057155057,0.00030017734,0.0003556754,0.000034786975,0.0001341112,0.000026624155,0.000668201,0.00021703649,0.000036814767],"category_scores_gemma":[0.00018410724,0.00021586115,0.00048502255,0.0003448137,0.0001952494,0.000004179436,0.00033114155,0.00025694742,0.000011131226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007156229,0.00011487477,0.0011071034,0.0008047949,0.00004898881,0.000010920866,0.000040060826,0.00017536231,0.9971349,0.0002989018,0.000089283385,0.00010321946],"study_design_scores_gemma":[0.00071738625,0.00012858314,0.00015616776,0.0003731491,0.00006889984,0.000012131101,0.000112893365,0.00010947159,0.9972271,0.000048237438,0.0008046453,0.00024138278],"about_ca_topic_score_codex":0.00002013315,"about_ca_topic_score_gemma":0.000004215454,"teacher_disagreement_score":0.0036939036,"about_ca_system_score_codex":0.000034453362,"about_ca_system_score_gemma":0.00058793166,"threshold_uncertainty_score":0.88025624},"labels":[],"label_agreement":null},{"id":"W3163249352","doi":"10.1016/j.molcel.2021.04.014","title":"Intrinsically disordered Meningioma-1 stabilizes the BAF complex to cause AML","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Hyundai Hope On Wheels; National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; Leukemia and Lymphoma Society; Children's Hospital of Philadelphia; European Molecular Biology Organization; American Society of Hematology; Doris Duke Charitable Foundation","keywords":"Biology; Myeloid leukemia; Enhancer; Cancer research; Progenitor cell; Myeloid; Chromatin; Transcription factor; Leukemia; Haematopoiesis; Chromosomal translocation; Cell biology; Stem cell; Genetics; Gene","score_opus":0.012005155937524572,"score_gpt":0.24186213130596693,"score_spread":0.22985697536844235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163249352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96850514,0.0010299257,0.015544454,0.0037719728,0.00016686827,0.00038711977,0.000022353064,0.000030056943,0.010542123],"genre_scores_gemma":[0.99322635,0.000036217425,0.0023016743,0.0024839654,0.00008396054,0.00003960043,0.00018832617,0.000025338339,0.0016145918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988525,0.00013795629,0.00019297066,0.00037981934,0.00018848266,0.00024825105],"domain_scores_gemma":[0.9990871,0.000010869413,0.000045136163,0.00060885894,0.00012985991,0.00011820998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010498274,0.00015785327,0.00012135615,0.00002566232,0.000107011016,0.00006408149,0.00024114182,0.00008516232,0.00013719598],"category_scores_gemma":[0.00015142343,0.00012904679,0.00011701938,0.00019248435,0.000057604702,0.0000024877802,0.0002724264,0.00008756748,0.00006450564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022604332,0.000070499984,0.00012112667,0.000007968852,0.000028297683,0.000031711344,0.00005660203,0.000048960497,0.98908406,0.0003113406,0.008572316,0.0016445055],"study_design_scores_gemma":[0.00029516933,0.00008825912,0.00021248004,0.0000032724308,0.000012120573,0.0000066790935,0.0000824944,0.00002504484,0.7148996,0.000057353664,0.2841754,0.00014212071],"about_ca_topic_score_codex":0.000012606023,"about_ca_topic_score_gemma":0.000048039423,"teacher_disagreement_score":0.2756031,"about_ca_system_score_codex":0.0000127865815,"about_ca_system_score_gemma":0.000088269284,"threshold_uncertainty_score":0.52623755},"labels":[],"label_agreement":null},{"id":"W3173520655","doi":"10.1016/j.molcel.2021.05.024","title":"Genome-wide mapping of human DNA replication by optical replication mapping supports a stochastic model of eukaryotic replication","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Human Genome Research Institute; National Institutes of Health; Institut National Du Cancer; National Institute of General Medical Sciences; Centre National de la Recherche Scientifique; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche","keywords":"Biology; Origin recognition complex; Replication timing; Licensing factor; DNA replication; Pre-replication complex; Replication (statistics); Origin of replication; Computational biology; Control of chromosome duplication; Chromatin; Genetics; Genome; Eukaryotic DNA replication; DNA; Gene; Virology","score_opus":0.013865201992058599,"score_gpt":0.23808490016755543,"score_spread":0.22421969817549683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173520655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6582841,0.0004213566,0.3394614,0.000108218155,0.000018712344,0.0003342123,0.000019882207,0.000022703956,0.0013293823],"genre_scores_gemma":[0.98669976,0.000033271208,0.010581147,0.00016971813,0.000022916978,0.0000855835,0.0015637097,0.00005707738,0.0007867912],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974273,0.00009010699,0.00070047437,0.0012013756,0.00029858932,0.00028218047],"domain_scores_gemma":[0.99582016,0.00001588278,0.00046873826,0.0032275023,0.00035800625,0.00010972131],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005353344,0.0002190446,0.00029661664,0.00009041815,0.0000643958,0.000015906364,0.0003023178,0.00022866006,0.000015136091],"category_scores_gemma":[0.0003772704,0.00027116088,0.00018542928,0.00024674094,0.00007644465,0.000008957188,0.0002150494,0.00011062932,0.000004600508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013092214,0.00018450597,0.00016412989,0.00015981002,0.000042000607,0.0000036273518,0.00008462243,0.0020006842,0.9965476,0.00027158723,0.00013663826,0.00039172743],"study_design_scores_gemma":[0.00034283748,0.00012245469,0.00048686512,0.000034620272,0.000050146176,0.00001165026,0.00007212145,0.00639392,0.9912087,0.00077619526,0.0002612167,0.00023932621],"about_ca_topic_score_codex":0.000006510463,"about_ca_topic_score_gemma":0.000001235435,"teacher_disagreement_score":0.32888025,"about_ca_system_score_codex":0.000048114878,"about_ca_system_score_gemma":0.0001513523,"threshold_uncertainty_score":0.9999741},"labels":[],"label_agreement":null},{"id":"W3185845130","doi":"10.1016/j.molcel.2021.06.009","title":"Transcription-mediated supercoiling regulates genome folding and loop formation","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Social Fund; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Division of Civil, Mechanical and Manufacturing Innovation; H2020 Marie Skłodowska-Curie Actions; Guangzhou Regenerative Medicine and Health Guangdong Laboratory; Agencia Estatal de Investigación; Horizon 2020; Faculty of Science and Engineering, University of Manchester; University of California, San Francisco; National Institutes of Health; Research Executive Agency; National Natural Science Foundation of China; University of Oxford; Centres de Recerca de Catalunya; National Institute of General Medical Sciences; European Commission; Ministerio de Ciencia e Innovación; Generalitat de Catalunya; University of Edinburgh; European Regional Development Fund; Broad Institute; European Molecular Biology Laboratory; University of Pennsylvania; University of Michigan; Albert Ellis Institute; Institute of Genetics; Agència de Gestió d'Ajuts Universitaris i de Recerca; National Science Foundation","keywords":"Chromatin; Cohesin; Biology; DNA supercoil; Cell biology; Transcription (linguistics); Biophysics; DNA; Genetics; DNA replication","score_opus":0.004482778490302261,"score_gpt":0.1823629174231754,"score_spread":0.17788013893287313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3185845130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985775,0.0034943046,0.009560768,0.00009295817,0.00005356558,0.000081747465,0.000015787415,0.000011883376,0.00091398065],"genre_scores_gemma":[0.99565953,0.0005993273,0.002487784,0.00022131704,0.00003191957,0.0000058978335,0.0006825983,0.000025242909,0.0002863775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992752,0.00003522442,0.00017028014,0.00025525974,0.00007931628,0.00018473824],"domain_scores_gemma":[0.99960464,0.000004604497,0.000036784262,0.00021720781,0.00006931899,0.00006744906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007996892,0.0001231074,0.00010220862,0.000027796119,0.00007375364,0.000049317056,0.00007246493,0.00011637822,0.000016065724],"category_scores_gemma":[0.000017814387,0.00013995389,0.00006674392,0.000069625945,0.000025356103,0.0000056423232,0.000056558412,0.000058105248,0.0000064586434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000053150347,0.000022049559,0.00007228701,0.000046292967,0.00001565192,0.000019113693,0.000085404776,0.00040771105,0.9989403,0.00004883706,0.000017113442,0.00031991987],"study_design_scores_gemma":[0.00046557595,0.000050725976,0.00030424274,0.000008946575,0.000025099062,0.000038113052,0.0002173309,0.004143811,0.9903677,0.00013298192,0.0040430822,0.00020237036],"about_ca_topic_score_codex":0.0000035554046,"about_ca_topic_score_gemma":0.000010787752,"teacher_disagreement_score":0.009884531,"about_ca_system_score_codex":0.000013032729,"about_ca_system_score_gemma":0.000035490884,"threshold_uncertainty_score":0.57071537},"labels":[],"label_agreement":null},{"id":"W3187294536","doi":"10.1016/j.molcel.2021.07.010","title":"FACT is recruited to the +1 nucleosome of transcribed genes and spreads in a Chd1-dependent manner","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council; Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health; Korea Foundation for Advanced Studies; Compute Canada","keywords":"Nucleosome; Biology; Chromatin; RNA polymerase II; Histone; Genetics; Cell biology; Transcription (linguistics); Computational biology; Saccharomyces cerevisiae; Gene; Histone code; Epigenetics; Promoter; Gene expression","score_opus":0.006635612514777994,"score_gpt":0.21111658350976847,"score_spread":0.2044809709949905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3187294536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949522,0.0022233853,0.001038261,0.000679497,0.00004653907,0.00017833759,0.00004481858,0.0000028941436,0.0008340867],"genre_scores_gemma":[0.9973662,0.00034871345,0.0008928271,0.0007483034,0.000016899468,0.000013137096,0.000049742644,0.000022954271,0.000541242],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991839,0.000053814445,0.00018898326,0.00029655988,0.00010114948,0.0001755967],"domain_scores_gemma":[0.99947125,0.0000044145013,0.00003985295,0.0003769668,0.00004999887,0.000057512545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009175414,0.00012479739,0.00013736637,0.000031850883,0.000025581314,0.00002013465,0.00015732175,0.000097959455,0.00002435882],"category_scores_gemma":[0.000009738106,0.00010814871,0.00007373806,0.00010150395,0.000026084497,0.000001273797,0.000113975744,0.00006282397,0.0000045300226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018072624,0.00005456579,0.0005265636,0.000029223651,0.000022320557,0.000025567462,0.00028473337,0.0003196687,0.9972097,0.00003145401,0.000107304164,0.0013707913],"study_design_scores_gemma":[0.00045130658,0.00008936548,0.0014762327,0.000010822689,0.000018229697,0.000011116474,0.00020056091,0.00030488826,0.98592395,0.00006381041,0.011301644,0.00014806654],"about_ca_topic_score_codex":0.000039821734,"about_ca_topic_score_gemma":0.00012400236,"teacher_disagreement_score":0.011285779,"about_ca_system_score_codex":0.000008253272,"about_ca_system_score_gemma":0.000042287378,"threshold_uncertainty_score":0.44101766},"labels":[],"label_agreement":null},{"id":"W3192327720","doi":"10.1016/j.molcel.2021.07.013","title":"Reconstitution of the destruction complex defines roles of AXIN polymers and APC in β-catenin capture, phosphorylation, and ubiquitylation","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"Cancer Research UK; Wellcome Trust","keywords":"Biology; Wnt signaling pathway; Phosphorylation; Catenin; Cell biology; Ubiquitin; Ubiquitin ligase; Immunoprecipitation; Beta-catenin; Signal transduction; Biochemistry; Genetics; Cell culture; Gene","score_opus":0.008164343447599934,"score_gpt":0.20621447116343478,"score_spread":0.19805012771583486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192327720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934946,0.004297911,0.0012494226,0.00007485422,0.000053485892,0.00007819974,0.000004757367,0.0000020396344,0.00074473064],"genre_scores_gemma":[0.9985515,0.00021958127,0.0010126841,0.00004564369,0.000008663032,0.0000043967007,0.00005388187,0.000006244401,0.00009744073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945545,0.000050768638,0.00017627503,0.00016562235,0.000077493074,0.00007439295],"domain_scores_gemma":[0.9997047,0.000004974391,0.00009777904,0.00010081698,0.00007449533,0.000017195624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008949011,0.00007579996,0.00009419519,0.00002840638,0.000030198276,0.000006836728,0.00004406701,0.000082934705,0.000010127261],"category_scores_gemma":[0.000022754968,0.00006840931,0.000028868695,0.0001130318,0.00011723457,0.000003967308,0.000052880816,0.000039029397,1.2772091e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023439334,0.000013714341,0.032927983,0.000033089666,0.00001074829,7.389641e-7,0.00008502867,0.00020724899,0.96470404,0.00017654173,0.000023370558,0.0017940813],"study_design_scores_gemma":[0.00034759592,0.000016011596,0.034672655,0.000023009916,0.000015408423,0.000007380395,0.000106549895,0.000081230064,0.96404934,0.00025143902,0.00035373407,0.00007563515],"about_ca_topic_score_codex":0.00004881637,"about_ca_topic_score_gemma":0.00007628672,"teacher_disagreement_score":0.0050568655,"about_ca_system_score_codex":0.0000076520455,"about_ca_system_score_gemma":0.000071189446,"threshold_uncertainty_score":0.2789651},"labels":[],"label_agreement":null},{"id":"W3195620775","doi":"10.1016/j.molcel.2021.07.029","title":"Molecular mechanisms of early plant pattern-triggered immune signaling","year":2021,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":475,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"H2020 European Research Council; Horizon 2020; European Research Council; Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; Universität Zürich; European Commission; Gatsby Charitable Foundation; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; European Molecular Biology Organization","keywords":"Biology; Pattern recognition receptor; Cell biology; Signal transduction; Immune system; Receptor; Reprogramming; Immunity; Phosphorylation; Kinase; Plant Immunity; Cell signaling; Cytoplasm; Cell; Immunology; Genetics; Arabidopsis; Gene","score_opus":0.024652323184590114,"score_gpt":0.23458224366229877,"score_spread":0.20992992047770864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195620775","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014549856,0.9831794,0.00048187646,0.000012869001,0.00022033081,0.00038512735,0.0006318527,0.000034201876,0.0005045138],"genre_scores_gemma":[0.02771964,0.96930844,0.00016386842,0.00006812707,0.000042577292,0.00004006172,0.0024776314,0.000009935525,0.0001697216],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99779385,0.0004096634,0.0007246684,0.0004458293,0.00026517687,0.00036079797],"domain_scores_gemma":[0.99892753,0.00014683862,0.0005133323,0.00022482501,0.000097136595,0.00009034947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020684574,0.00042927905,0.0013067999,0.00004566468,0.00010345248,0.00009470281,0.0006052174,0.00034496552,0.0004926845],"category_scores_gemma":[0.000019979436,0.00018987808,0.0010219063,0.00039115248,0.000029748076,0.00004869231,0.00023662769,0.00049640756,0.00006979232],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000029196192,0.00019080391,3.316398e-7,0.0008594062,0.0001364845,0.00036546343,0.000010923996,0.0000019849958,0.6323185,0.000056720703,0.000038638973,0.36601782],"study_design_scores_gemma":[0.0001206729,0.0002708976,0.0000039268775,0.006499901,0.0005509649,0.00011932788,0.000055429897,0.000005141902,0.28281808,0.000067438,0.7087423,0.0007459009],"about_ca_topic_score_codex":0.0005699461,"about_ca_topic_score_gemma":0.000011653158,"teacher_disagreement_score":0.7087037,"about_ca_system_score_codex":0.00004132577,"about_ca_system_score_gemma":0.00004490706,"threshold_uncertainty_score":0.77430034},"labels":[],"label_agreement":null},{"id":"W3199727001","doi":"10.1016/j.molcel.2021.08.032","title":"Mitochondrial-derived compartments: A “fusel alcohol generator” in yeast?","year":2021,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Biology; Fusel alcohol; Yeast; Mitochondrion; Saccharomyces cerevisiae; Alcohol; Cell biology; Biochemistry","score_opus":0.009857838482394412,"score_gpt":0.21324399660239396,"score_spread":0.20338615811999955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199727001","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86414766,0.032014795,0.008516596,0.07759052,0.010297242,0.0024478093,0.00046959487,0.00017928884,0.004336506],"genre_scores_gemma":[0.20539522,0.0026149598,0.022034286,0.67075807,0.034463428,0.0006135241,0.031617165,0.0009860554,0.03151728],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99794334,0.00016184819,0.0003484411,0.0008795101,0.0002107125,0.00045615755],"domain_scores_gemma":[0.998957,0.0000015561111,0.00011665271,0.00077171903,0.00009252455,0.000060587146],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000074526,0.00042686262,0.00040532878,0.0001164713,0.000033966517,0.000059015456,0.00027630583,0.00083744625,0.00004022957],"category_scores_gemma":[0.000033522105,0.00046388604,0.00022789878,0.00017747014,0.000041095434,0.0000024567473,0.00013341787,0.0006568415,0.00004396644],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008155331,0.000044919347,0.0000054022507,0.00006696659,0.000047349902,0.00022748183,0.000009987189,0.00014412212,0.67822033,5.642157e-7,0.3211325,0.00009221922],"study_design_scores_gemma":[0.0004240425,0.00002757555,0.00000599971,0.00002408774,0.000028573339,0.000013894948,0.0000030595218,0.000006789825,0.4956028,0.0000015296444,0.5035899,0.00027174698],"about_ca_topic_score_codex":0.000038765513,"about_ca_topic_score_gemma":0.000009462286,"teacher_disagreement_score":0.65875244,"about_ca_system_score_codex":0.00003708423,"about_ca_system_score_gemma":0.00011206997,"threshold_uncertainty_score":0.9997813},"labels":[],"label_agreement":null},{"id":"W3199921626","doi":"10.1016/j.molcel.2021.08.028","title":"A hydride transfer complex reprograms NAD metabolism and bypasses senescence","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Jewish General Hospital; Université de Montréal; Institute for Research in Immunology and Cancer; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; National Foundation for Science and Technology Development; Canadian Cancer Society Research Institute; Steirische Wirtschaftsförderungsgesellschaft; Canadian Institutes of Health Research; Institut Du Cancer de Montréal; Bundesministerium für Digitalisierung und Wirtschaftsstandort; Natural Sciences and Engineering Research Council of Canada; Bundesministerium für Verkehr, Innovation und Technologie; Österreichischen Akademie der Wissenschaften; Terry Fox Research Institute; Canadian Imperial Bank of Commerce","keywords":"Biology; Senescence; NAD+ kinase; Cancer cell; Cell biology; Cytosol; Carcinogenesis; Malic enzyme; Biochemistry; Enzyme; Cancer; Dehydrogenase; Gene; Genetics","score_opus":0.011508387627625164,"score_gpt":0.23853036496580743,"score_spread":0.22702197733818227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199921626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9440862,0.014096221,0.038246136,0.00018448617,0.00007621775,0.00012160359,0.000010178901,0.000014224623,0.0031647284],"genre_scores_gemma":[0.99325585,0.0010233681,0.004690026,0.00034852128,0.000063688305,0.000013392181,0.0001762672,0.000027792172,0.00040109537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988979,0.000097799726,0.0001725669,0.00047065975,0.00013981109,0.00022122491],"domain_scores_gemma":[0.9993692,0.0000071120458,0.000025019535,0.0003896155,0.00010337755,0.00010567312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011449897,0.00015513515,0.00014874067,0.000021880194,0.00006566231,0.000053959724,0.00008786142,0.000118123426,0.000022144459],"category_scores_gemma":[0.00003332848,0.0001631687,0.0000918213,0.00010703053,0.000059671267,0.0000025907639,0.00007421063,0.00007014613,0.000005246913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000101346195,0.000053939522,0.00060230406,0.0000215357,0.000022607213,0.000044387867,0.00003043014,0.00004067642,0.99221325,0.000112948845,0.00003859565,0.006809161],"study_design_scores_gemma":[0.00037956398,0.000048173657,0.0017058364,0.0000043825294,0.000033436565,0.000008199419,0.000027485094,0.00008575494,0.8831821,0.00015937742,0.11418162,0.00018404488],"about_ca_topic_score_codex":0.000024391768,"about_ca_topic_score_gemma":0.000028705532,"teacher_disagreement_score":0.11414303,"about_ca_system_score_codex":0.0000038571934,"about_ca_system_score_gemma":0.000051095012,"threshold_uncertainty_score":0.6653827},"labels":[],"label_agreement":null},{"id":"W3203019814","doi":"10.1016/j.molcel.2021.09.011","title":"Cellular pathways influenced by protein arginine methylation: Implications for cancer","year":2021,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":181,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research","keywords":"Biology; Methylation; Arginine; DNA methylation; Cancer; Cancer research; Computational biology; Genetics; Bioinformatics; Cell biology; Amino acid; Gene; Gene expression","score_opus":0.021215849819155013,"score_gpt":0.30254741538270025,"score_spread":0.2813315655635452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203019814","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028781328,0.965988,0.029888466,0.00011006289,0.00017499074,0.002494771,0.0007198254,0.000029817811,0.00030625844],"genre_scores_gemma":[0.0003720845,0.9800907,0.0015730949,0.00008176399,0.00034944128,0.003735158,0.011476573,0.00018711036,0.0021340996],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976429,0.000169845,0.00063304626,0.0009808458,0.00017126209,0.0004021053],"domain_scores_gemma":[0.9981063,0.000018527035,0.0004903948,0.0009643814,0.0002824849,0.00013791189],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017269573,0.00052764843,0.0008490428,0.00009221905,0.000123677,0.00005774306,0.0003568752,0.0007865805,0.00004237062],"category_scores_gemma":[0.000053549524,0.0005558595,0.0007197418,0.00036757413,0.00005625414,0.0000047235935,0.00013526922,0.00021951713,0.000010881202],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000061868254,0.00006122186,6.597476e-7,0.0023254796,0.0002377171,0.0000018398102,0.000007613874,0.0001834266,0.66784024,0.00011698434,0.0037458215,0.32547277],"study_design_scores_gemma":[0.00028009622,0.00006913229,3.0387216e-7,0.0006653754,0.000435596,0.0000029836099,0.000002101846,0.00001069118,0.20456918,0.000036222267,0.7934544,0.00047391807],"about_ca_topic_score_codex":0.000015271524,"about_ca_topic_score_gemma":0.000007345641,"teacher_disagreement_score":0.78970855,"about_ca_system_score_codex":0.00013101884,"about_ca_system_score_gemma":0.0007994239,"threshold_uncertainty_score":0.9996893},"labels":[],"label_agreement":null},{"id":"W3203078114","doi":"10.1016/j.molcel.2021.09.007","title":"Intrinsic bias at non-canonical, β-arrestin-coupled seven transmembrane receptors","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Moonshot Research and Development Program; Science and Engineering Research Board; Japan Society for the Promotion of Science; National Health and Medical Research Council; Canadian Institutes of Health Research; The Wellcome Trust DBT India Alliance; Japan Science and Technology Agency; Lady Tata Memorial Trust; Daiichi Sankyo Foundation of Life Science; Wellcome Trust; Council of Scientific and Industrial Research, India; Fonds de Recherche du Québec - Santé; Department of Science and Technology, Ministry of Science and Technology, India; Department of Biotechnology, Ministry of Science and Technology, India; Indian Institute of Technology Kanpur; Japan Agency for Medical Research and Development; Uehara Memorial Foundation; European Molecular Biology Organization","keywords":"G protein-coupled receptor; Biology; Receptor; Transmembrane protein; Arrestin; Transmembrane domain; Signal transduction; Cell biology; Biochemistry","score_opus":0.01103722955922016,"score_gpt":0.21938420263854283,"score_spread":0.20834697307932268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203078114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97781056,0.0020722593,0.014204041,0.000239525,0.00055693317,0.00021724665,0.000009834173,0.000027806753,0.0048617856],"genre_scores_gemma":[0.98963535,0.0003688387,0.0033231296,0.0006623967,0.00024550036,0.000027417664,0.00035663598,0.00008110963,0.0052996404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808806,0.0001278463,0.000344811,0.0007023897,0.00027136554,0.00046554327],"domain_scores_gemma":[0.9989109,0.000018869783,0.00009667954,0.0006070804,0.00014793024,0.00021851397],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022133633,0.00029700907,0.00029175056,0.000043737626,0.00013490595,0.000051712257,0.000260199,0.00029132533,0.0011601605],"category_scores_gemma":[0.00007330627,0.00030569738,0.00030435188,0.0002117317,0.000055328757,0.0000037541643,0.00018688726,0.00017947155,0.00010720113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058584126,0.00007247422,0.0000750945,0.000042546264,0.000053944157,0.0001484833,0.00005465299,0.00052357,0.9960652,0.000024386281,0.0010183939,0.0018626832],"study_design_scores_gemma":[0.00086858205,0.0001593011,0.000023461767,0.000020094405,0.00004123073,0.00002922835,0.00004658376,0.00023589552,0.90544194,0.000039201943,0.09273687,0.00035761527],"about_ca_topic_score_codex":0.000020348147,"about_ca_topic_score_gemma":0.00003222436,"teacher_disagreement_score":0.09171848,"about_ca_system_score_codex":0.000037853126,"about_ca_system_score_gemma":0.0002259257,"threshold_uncertainty_score":0.9999395},"labels":[],"label_agreement":null},{"id":"W3205659506","doi":"10.1016/j.molcel.2021.09.029","title":"Adaptive translational pausing is a hallmark of the cellular response to severe environmental stress","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Center for Advancing Translational Sciences; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institute on Aging","keywords":"Biology; Cell biology; Integrated stress response; Translation (biology); Cellular stress response; Stress granule; Mitochondrion; Fragmentation (computing); Fight-or-flight response; Cellular adaptation; Messenger RNA; Genetics; Gene","score_opus":0.006241176127011421,"score_gpt":0.19067039671730915,"score_spread":0.18442922059029773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3205659506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818995,0.0010652677,0.015217286,0.00042876176,0.00006537225,0.0002035227,0.00013860504,0.0000029502933,0.0009787274],"genre_scores_gemma":[0.9947641,0.000012587117,0.0034453203,0.0005621099,0.000026457159,0.000012014741,0.000031579075,0.000023364668,0.0011224502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988734,0.000265085,0.00015748452,0.00030786745,0.00023357758,0.0001625998],"domain_scores_gemma":[0.9994222,0.000014860227,0.000058036763,0.00041580867,0.000026632659,0.000062485466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014153626,0.0001330661,0.00010948784,0.000018355393,0.00006646991,0.000011371243,0.00017743061,0.00011173329,0.00014997192],"category_scores_gemma":[0.000021124404,0.00011936285,0.00016131974,0.00007523905,0.000036908743,0.0000020488949,0.00011503252,0.00005704443,0.000010485477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026851002,0.000068124784,0.0001323579,0.000009262014,0.000032656797,0.000023900893,0.00015911863,0.00039959708,0.9979985,0.000016824117,0.00006642781,0.0008247674],"study_design_scores_gemma":[0.0002835529,0.00009302963,0.0004176924,0.000021567168,0.000024095305,0.0000062962436,0.00013663425,0.000016676051,0.99191874,0.00010218278,0.006830509,0.00014904673],"about_ca_topic_score_codex":0.0000041172925,"about_ca_topic_score_gemma":0.000002666786,"teacher_disagreement_score":0.01286461,"about_ca_system_score_codex":0.000010218746,"about_ca_system_score_gemma":0.00008677865,"threshold_uncertainty_score":0.48674756},"labels":[],"label_agreement":null},{"id":"W3208274049","doi":"10.1016/j.molcel.2021.10.008","title":"Histone H3.3 K27M and K36M mutations de-repress transposable elements through perturbation of antagonistic chromatin marks","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill Genome Centre; Jewish General Hospital; McGill University","funders":"National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; PRC2; Histone H3; Chromatin; Genetics; Histone; Cell biology; Psychological repression; Repressor; Gene; Gene expression","score_opus":0.008069492349100359,"score_gpt":0.21940724408721202,"score_spread":0.21133775173811165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208274049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99249184,0.00076073856,0.00051239727,0.00067956303,0.00003791085,0.00011092089,0.00007499916,0.000014610045,0.0053170295],"genre_scores_gemma":[0.9955904,0.000050956616,0.003044982,0.00013620066,0.000021006748,0.000011923775,0.00027984928,0.000001123397,0.00086356665],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993197,0.00006231967,0.0001793455,0.00018786566,0.00011734532,0.00013347357],"domain_scores_gemma":[0.99971795,0.00005010608,0.00006060159,0.000053087282,0.00007613345,0.00004209534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000050865878,0.00007828226,0.00010396972,0.0000045065376,0.00011381091,0.000023641953,0.00006413766,0.00005118089,0.00055251],"category_scores_gemma":[0.00002486966,0.00004215774,0.00004562025,0.00017644453,0.000041134226,0.000037492,0.0000226065,0.000042387175,0.0000048971665],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000039760216,0.00013965234,0.0015812262,0.000024247605,0.000011349569,0.000011686687,0.00037735523,0.00006917548,0.99531144,0.0004194471,0.00003126212,0.0020191704],"study_design_scores_gemma":[0.00050717633,0.00017520104,0.035627477,0.000035877394,0.00011189356,0.000023315515,0.00034779916,0.002496554,0.9464544,0.0070306077,0.0069462745,0.00024340818],"about_ca_topic_score_codex":0.00010237838,"about_ca_topic_score_gemma":0.00009067719,"teacher_disagreement_score":0.048857037,"about_ca_system_score_codex":0.000020444042,"about_ca_system_score_gemma":0.000028437162,"threshold_uncertainty_score":0.6049597},"labels":[],"label_agreement":null},{"id":"W3212303755","doi":"10.1016/j.molcel.2021.10.026","title":"Parp1 promotes sleep, which enhances DNA repair in neurons","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Sleep and Wakefulness Research","field":"Neuroscience","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Mental Health; Achelis Foundation; Azrieli Foundation; Israel Science Foundation; Division of Graduate Education; United States-Israel Binational Science Foundation; European Research Council; National Institutes of Health; National Science Foundation","keywords":"Biology; PARP1; DNA repair; Poly ADP ribose polymerase; DNA damage; Cell biology; Zebrafish; Sleep deprivation; Sleep (system call); Polymerase; Neuroscience; DNA; Circadian rhythm; Genetics; Gene","score_opus":0.022076685286272546,"score_gpt":0.2716922070683053,"score_spread":0.24961552178203278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212303755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.972838,0.00027339597,0.000391821,0.00083249935,0.00017737389,0.00022906193,0.000008552524,0.00010946378,0.025139866],"genre_scores_gemma":[0.99785244,0.00004552702,0.00021331006,0.00067530596,0.00002782879,0.000061115665,0.0000041868166,0.00002922608,0.0010910345],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99766856,0.00044361842,0.00021851102,0.0006969859,0.0004721058,0.0005001848],"domain_scores_gemma":[0.99906355,0.00015079968,0.000037871796,0.0005570031,0.00007183858,0.00011890947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018723815,0.000155285,0.00017588603,0.00010921742,0.000093580245,0.00006284059,0.00030764833,0.00007822716,0.00023724764],"category_scores_gemma":[0.0009570399,0.00015466339,0.000097128635,0.0010824716,0.0000676608,0.00010021827,0.00020343009,0.00031268588,0.00022379479],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011502734,0.00024504412,0.00059046975,0.00003897703,0.000002343336,0.0018285762,0.00011960449,0.00005756222,0.9950107,0.00028888436,0.00020288417,0.001603503],"study_design_scores_gemma":[0.00034172827,0.00005701528,0.00049478345,0.000015565194,0.0000050800104,0.000014843549,0.000032597036,0.0015494499,0.9910061,0.00034113077,0.005972181,0.00016954026],"about_ca_topic_score_codex":0.000021641408,"about_ca_topic_score_gemma":0.000056749574,"teacher_disagreement_score":0.0250145,"about_ca_system_score_codex":0.00002420397,"about_ca_system_score_gemma":0.00011531398,"threshold_uncertainty_score":0.630699},"labels":[],"label_agreement":null},{"id":"W3217449227","doi":"10.1016/j.molcel.2021.11.008","title":"Sugar defeats the Hippo: Glycogen regulation of the Hippo pathway in liver","year":2021,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Biology; Hippo signaling pathway; Glycogen; Carcinogenesis; Cell biology; Cancer research; Signal transduction; Biochemistry; Gene","score_opus":0.010034645167069117,"score_gpt":0.19312496895939055,"score_spread":0.18309032379232143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217449227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.887559,0.023705281,0.0015344308,0.06967473,0.0013132495,0.001735346,0.00030607372,0.000040631687,0.014131273],"genre_scores_gemma":[0.87658745,0.00023047921,0.00028417617,0.11195327,0.001088066,0.00007448154,0.0014595352,0.00016608903,0.0081564635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973536,0.00065401633,0.0004362871,0.00066515227,0.00045597742,0.00043498204],"domain_scores_gemma":[0.9980625,0.000039138202,0.0002950873,0.0014040982,0.00015695166,0.000042260395],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003414261,0.00039471837,0.0003424426,0.000067816654,0.00009660622,0.000039751576,0.0007451671,0.0010065178,0.000072434676],"category_scores_gemma":[0.00007164374,0.0002774653,0.00047921602,0.00025261755,0.00015872766,0.0000024417227,0.00031244112,0.00084818393,0.000022534408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018928136,0.000047528607,0.00010434296,0.0001462922,0.000066541026,0.00022284912,0.00014128903,0.0003795097,0.95919394,0.000012938389,0.03875788,0.0009079489],"study_design_scores_gemma":[0.0002450429,0.000050327915,0.000062146035,0.000070154725,0.000042326392,0.000015750835,0.000016469437,0.000039925748,0.6056489,0.00008699875,0.39348188,0.000240073],"about_ca_topic_score_codex":0.00008873239,"about_ca_topic_score_gemma":0.000044349334,"teacher_disagreement_score":0.35472402,"about_ca_system_score_codex":0.000038463295,"about_ca_system_score_gemma":0.00031325684,"threshold_uncertainty_score":0.99996775},"labels":[],"label_agreement":null},{"id":"W4200424290","doi":"10.1016/j.molcel.2021.12.002","title":"The CRISPR-Cas toolbox and gene editing technologies","year":2021,"lang":"en","type":"review","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":397,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"China Postdoctoral Science Foundation; National Postdoctoral Program for Innovative Talents; Chinese Academy of Sciences; China Association for Science and Technology","keywords":"CRISPR; Biology; Genome editing; Toolbox; Computational biology; Epigenetics; Gene; Cas9; Computer science; Genetics","score_opus":0.010077251134158163,"score_gpt":0.30614277559078457,"score_spread":0.2960655244566264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200424290","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000040151535,0.9894982,0.008921557,0.000049125192,0.0002698846,0.0002711379,0.000015406576,0.000040683793,0.00089384295],"genre_scores_gemma":[0.0002520354,0.99741155,0.0013539946,0.000025921487,0.0001856693,0.00007720181,0.00014961889,0.000072236755,0.00047175004],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986045,0.00006556877,0.0003114003,0.00053058297,0.00013061846,0.00035734955],"domain_scores_gemma":[0.99904525,0.0000288252,0.00011069302,0.00071536214,0.000049613114,0.00005023929],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016663858,0.00036773714,0.0005051723,0.00004435777,0.000144337,0.00010889654,0.0003459008,0.0004312371,0.000002577141],"category_scores_gemma":[0.00012943435,0.00027987748,0.0002973171,0.00012986007,0.00009132443,0.0000011226895,0.00039434418,0.00028183695,0.0000067221986],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[9.519777e-7,0.0000131829875,0.000001180166,0.0015850177,0.0001310398,0.00008870151,0.00000884506,0.000011996941,0.010353597,0.00006195918,0.001455955,0.9862876],"study_design_scores_gemma":[0.000072065515,0.000035172397,2.1693222e-7,0.00034707336,0.00018263976,0.00007785081,0.0000672912,0.000004658941,0.0787477,0.000010711386,0.9201688,0.00028578323],"about_ca_topic_score_codex":0.0000025211016,"about_ca_topic_score_gemma":0.0000036405252,"teacher_disagreement_score":0.9860018,"about_ca_system_score_codex":0.000014119556,"about_ca_system_score_gemma":0.00010462266,"threshold_uncertainty_score":0.9999653},"labels":[],"label_agreement":null},{"id":"W4200426070","doi":"10.1016/j.molcel.2021.11.012","title":"Mechanism of PINK1 activation by autophosphorylation and insights into assembly on the TOM complex","year":2021,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Mechanism (biology); Autophosphorylation; PINK1; Cell biology; Computational biology; Phosphorylation; Genetics; Mitophagy; Autophagy; Epistemology; Protein kinase A","score_opus":0.00796993263574918,"score_gpt":0.21624846157638836,"score_spread":0.20827852894063917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200426070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9730445,0.004293081,0.020871403,0.00052245584,0.00003764733,0.00021659638,0.000012574822,0.000008948252,0.0009927846],"genre_scores_gemma":[0.99764323,0.0001099279,0.00092245993,0.0008040917,0.0000128357915,0.000017661128,0.0003757418,0.000017007726,0.00009706888],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99927527,0.00008523638,0.00013508667,0.00025908338,0.00014380578,0.00010150586],"domain_scores_gemma":[0.9994507,0.000017243248,0.00008751985,0.000326207,0.00008350205,0.00003482843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006801145,0.00011621663,0.00009591207,0.000016440226,0.00006603752,0.000020862026,0.00010050404,0.000090465546,0.000017091172],"category_scores_gemma":[0.00006978712,0.00009848702,0.00004192044,0.00008623525,0.00003221981,0.0000036561407,0.00010292816,0.000061418345,0.0000034083653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020439747,0.000049903698,0.0000066791536,0.00001698618,0.000016049966,0.000003088721,0.000040980325,0.000015456919,0.9817191,0.01624774,0.0012468867,0.00061672786],"study_design_scores_gemma":[0.0002503235,0.00015910206,0.00014801974,0.000012767567,0.000010353217,0.0000010346477,0.000035746023,0.00019515463,0.98765177,0.0023047086,0.009122375,0.00010866972],"about_ca_topic_score_codex":0.000025095685,"about_ca_topic_score_gemma":0.0000031061425,"teacher_disagreement_score":0.024598697,"about_ca_system_score_codex":0.000010965433,"about_ca_system_score_gemma":0.000042593598,"threshold_uncertainty_score":0.40161842},"labels":[],"label_agreement":null},{"id":"W4206200487","doi":"10.1016/j.molcel.2021.12.017","title":"Barcodes, co-cultures, and deep learning take genetically encoded biosensor multiplexing to the nth degree","year":2022,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Biosensor; Multiplexing; Degree (music); Computational biology; Computer science; Biochemistry; Telecommunications; Physics; Acoustics","score_opus":0.011559366249931846,"score_gpt":0.2557165016715405,"score_spread":0.24415713542160863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206200487","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16633397,0.056419097,0.14126071,0.5778545,0.0014637823,0.009690475,0.0018439816,0.0015591122,0.043574363],"genre_scores_gemma":[0.39935535,0.0025381937,0.052553903,0.5274854,0.0023563264,0.00021471053,0.006701826,0.00043904624,0.0083553],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968093,0.00047320346,0.00039863418,0.0011631907,0.00049795746,0.00065773877],"domain_scores_gemma":[0.99860567,0.000049238704,0.00021682528,0.00087074377,0.00012205277,0.0001354466],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031032355,0.0005937274,0.0004281078,0.00012855172,0.00048764262,0.0001349114,0.00059210387,0.0007087055,0.000020065909],"category_scores_gemma":[0.00018887533,0.00046154042,0.00031098124,0.00021263192,0.00019510288,0.0000025565093,0.0005227977,0.0014487685,0.000010812314],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051533043,0.000028876033,0.000024600984,0.00005219418,0.00014386157,0.00037123004,0.00005805727,0.00028107633,0.8856182,0.0000038706185,0.10619159,0.007174884],"study_design_scores_gemma":[0.00015731399,0.00025988265,0.0000065419163,0.000012741109,0.000090065354,0.000038475762,0.00004319227,0.00011583337,0.3377848,0.000009650332,0.66102374,0.0004577678],"about_ca_topic_score_codex":0.00003079746,"about_ca_topic_score_gemma":0.000034660912,"teacher_disagreement_score":0.55483216,"about_ca_system_score_codex":0.00004711812,"about_ca_system_score_gemma":0.000052078554,"threshold_uncertainty_score":0.99978364},"labels":[],"label_agreement":null},{"id":"W4206238555","doi":"10.1016/j.molcel.2021.12.026","title":"CRISPR-based genome editing through the lens of DNA repair","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":210,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Cancer Institute","keywords":"Genome editing; DNA repair; CRISPR; Recombinase; Transposase; DNA; Genome; Nucleotide excision repair; DNA damage","score_opus":0.007107046487407899,"score_gpt":0.24720928223716665,"score_spread":0.24010223574975875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206238555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87699896,0.00557945,0.10558477,0.00058217853,0.00039834363,0.00037717042,0.00006351905,0.000052819705,0.010362774],"genre_scores_gemma":[0.99694824,0.000016919372,0.0019079125,0.0006536232,0.00010411402,0.00003853996,0.00008037188,0.00003184077,0.00021841157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907774,0.00007256479,0.00018552812,0.00025398805,0.0001930617,0.00021714917],"domain_scores_gemma":[0.99937063,0.000009486576,0.000066589244,0.00049221807,0.000035718673,0.000025377673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001675489,0.00012407482,0.000106883126,0.000021988932,0.000109589644,0.0000066515668,0.00024885024,0.000043325028,0.00007074536],"category_scores_gemma":[0.000022271704,0.000114509065,0.00019235334,0.000112621936,0.000044122782,0.0000012664188,0.00020051158,0.00012440108,0.0000025995057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012058999,0.000043744392,0.000055633136,0.000028989414,0.000023779428,0.000009958613,0.000110892994,0.04560531,0.95322126,0.00007411683,0.00076219364,0.0000520499],"study_design_scores_gemma":[0.00026907385,0.00018269691,0.000103220176,0.0000020336945,0.000025696689,0.000004453653,0.00022168765,0.00051616534,0.79588866,0.000029932004,0.2026274,0.00012894919],"about_ca_topic_score_codex":0.000019511095,"about_ca_topic_score_gemma":0.000002812415,"teacher_disagreement_score":0.20186521,"about_ca_system_score_codex":0.000012323262,"about_ca_system_score_gemma":0.000056242778,"threshold_uncertainty_score":0.4669544},"labels":[],"label_agreement":null},{"id":"W4210407991","doi":"10.1016/j.molcel.2022.01.003","title":"ecDNAs personify cancer gangsters","year":2022,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; Princess Margaret Cancer Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; Oncogene; Carcinogenesis; Extrachromosomal DNA; Transcription (linguistics); Genetics; Gene; Cancer; Cancer research; Cell cycle","score_opus":0.006818385115012445,"score_gpt":0.2181749025159427,"score_spread":0.21135651740093025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210407991","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.072647125,0.079087324,0.0015558596,0.72817254,0.008587665,0.0024392332,0.004161611,0.00014581454,0.10320281],"genre_scores_gemma":[0.010750931,0.0023083794,0.00029978165,0.9574213,0.0035653294,0.00034256055,0.0043948693,0.00029029895,0.02062652],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979857,0.00008283504,0.00024033025,0.0008135221,0.00033402836,0.0005435684],"domain_scores_gemma":[0.9988481,0.000015572976,0.00017287201,0.00080817554,0.000068154324,0.000087167646],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007837994,0.00042482076,0.00029582626,0.00008754515,0.00012101131,0.00006962481,0.0005484247,0.0006264199,0.0009679523],"category_scores_gemma":[0.000023186501,0.00049688836,0.00036427382,0.00009552051,0.00007080453,0.0000011937856,0.00041068354,0.00089961087,0.000044206736],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022397298,0.000023387818,0.000035305762,0.00009107681,0.00009312775,0.00061295513,0.00003243181,0.00025756174,0.061479352,0.000003841696,0.93695897,0.0003896034],"study_design_scores_gemma":[0.00037704207,0.0002038871,0.000004491911,0.000010496691,0.000113249625,0.000012416102,0.000024114745,0.000010769725,0.05392378,0.00002083878,0.94471925,0.00057963864],"about_ca_topic_score_codex":0.00025245416,"about_ca_topic_score_gemma":0.000027404407,"teacher_disagreement_score":0.22924878,"about_ca_system_score_codex":0.0001426105,"about_ca_system_score_gemma":0.0003890674,"threshold_uncertainty_score":0.9999453},"labels":[],"label_agreement":null},{"id":"W4212807776","doi":"10.1016/j.molcel.2009.04.005","title":"Hidesaburo Hanafusa 1929–2009","year":2009,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"National Academy of Sciences; General Motors Foundation; American Association for Cancer Research","keywords":"Generosity; Wife; Humility; Excellence; Honor; Honesty; Dignity; Biology; Originality; Psychoanalysis; Environmental ethics; Sociology; Classics; Social science; Law; Psychology; History; Political science","score_opus":0.0032921634614667948,"score_gpt":0.19626005579202954,"score_spread":0.19296789233056275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212807776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7744332,0.00008738182,0.002323879,0.0007290319,0.00013935094,0.00011778109,0.0000046675723,0.000053699598,0.22211102],"genre_scores_gemma":[0.99030536,0.000010280908,0.0015966044,0.0024500997,0.000019806695,0.0000020795985,0.0000071825352,0.000009060533,0.00559955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993648,0.000019539191,0.000108027925,0.00020787353,0.0000890412,0.00021070737],"domain_scores_gemma":[0.9996518,0.0000042559473,0.00003338046,0.00022639977,0.0000033591857,0.00008080798],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000036474332,0.00010086671,0.0000761312,0.000017933828,0.00006534444,0.000037050377,0.00014911138,0.000043530563,0.003807756],"category_scores_gemma":[0.0000042269644,0.00009932951,0.00007577952,0.000111300345,0.000030717918,0.00009426727,0.000046750047,0.00009929061,0.002691741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000031091977,0.00006914732,0.0000457364,7.862725e-7,0.000001550659,0.00005269508,0.00004161309,0.000085191,0.981267,0.000023805702,0.007782293,0.010627115],"study_design_scores_gemma":[0.00022012055,0.00011158724,0.015935551,0.0000056808103,0.000016723583,0.000018428982,0.0000148023,0.00009167675,0.60282046,0.00030212977,0.38023487,0.00022798739],"about_ca_topic_score_codex":0.0001246314,"about_ca_topic_score_gemma":0.000014921363,"teacher_disagreement_score":0.37844652,"about_ca_system_score_codex":0.000050809365,"about_ca_system_score_gemma":0.00000350622,"threshold_uncertainty_score":0.9980848},"labels":[],"label_agreement":null},{"id":"W4212931835","doi":"10.1016/j.molcel.2022.02.011","title":"Regulation of GTPase function by autophosphorylation","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Institute of General Medical Sciences; Office of Science; Canada Foundation for Innovation; Argonne National Laboratory; Princess Margaret Cancer Foundation; Cancer Research UK; American Cancer Society; Doris Duke Charitable Foundation; Office of Research Infrastructure Programs, National Institutes of Health; Taiho Pharmaceutical; National Institutes of Health; Canadian Cancer Society Research Institute; National Cancer Institute; National Science Foundation","keywords":"Biology; Autophosphorylation; GTPase; Cell biology; Function (biology); Computational biology; Phosphorylation; Protein kinase A","score_opus":0.0039568265161280146,"score_gpt":0.19192219395382534,"score_spread":0.18796536743769732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212931835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9185867,0.0022736606,0.076012716,0.00007203378,0.00010671149,0.00026665675,0.00003406594,0.000020119856,0.0026273748],"genre_scores_gemma":[0.9974804,0.000006537825,0.00043853206,0.00018022663,0.000023142058,0.00003933468,0.0007369014,0.000019342748,0.0010755993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999161,0.00009617547,0.0001835507,0.00022582008,0.00021956433,0.000113859394],"domain_scores_gemma":[0.9995398,0.0000025710858,0.00013165132,0.00023802364,0.000049301572,0.00003866613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017997406,0.00009186618,0.00007944846,0.00004651291,0.00010952385,0.000006785545,0.00008170876,0.00005437661,0.00025981953],"category_scores_gemma":[0.000011134032,0.00011099009,0.00008172691,0.0001361965,0.000023212127,0.0000028900179,0.0000813159,0.0000635916,0.0000038607945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088829576,0.00006409185,0.000100149206,0.000012077185,0.000009955609,0.0000011323103,0.000013099248,0.008044012,0.98767674,0.00024784432,0.0019983815,0.0017436913],"study_design_scores_gemma":[0.00044169172,0.00023064693,0.00034299234,0.0000019206718,0.000016277068,0.0000020421764,0.00002431829,0.0013741795,0.92162335,0.00026269272,0.07556151,0.00011835716],"about_ca_topic_score_codex":0.000011500583,"about_ca_topic_score_gemma":4.3288674e-7,"teacher_disagreement_score":0.07889372,"about_ca_system_score_codex":0.000021467476,"about_ca_system_score_gemma":0.0000389521,"threshold_uncertainty_score":0.45260447},"labels":[],"label_agreement":null},{"id":"W4213081970","doi":"10.1016/j.molcel.2021.12.010","title":"Systematic mapping of nuclear domain-associated transcripts reveals speckles and lamina as hubs of functionally distinct retained introns","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":122,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; SickKids Foundation; Mount Sinai Hospital; University of Toronto","funders":"","keywords":"Biology; Intron; Nuclear lamina; RNA; Cell biology; Gene; Genetics; Cell nucleus; Lamina; Computational biology; RNA splicing; Function (biology); Nuclear protein; Transcription factor; Anatomy","score_opus":0.005923408483105351,"score_gpt":0.20396540318365577,"score_spread":0.19804199470055042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213081970","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955783,0.0012449645,0.0006898761,0.000099603036,0.000030766794,0.00034369229,0.000038574897,0.0000069325365,0.001967316],"genre_scores_gemma":[0.9983623,0.000026463156,0.00026413766,0.00007260722,0.000011517721,0.000019206336,0.00007940744,0.0000251047,0.0011392522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856955,0.00030256037,0.00034921296,0.00024712775,0.00031586166,0.00021570169],"domain_scores_gemma":[0.99937224,0.000024023464,0.00018692775,0.000264529,0.00008167993,0.00007061476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005118427,0.00012345937,0.00029164855,0.000075268516,0.00011525027,0.000011025442,0.0001810201,0.00005837524,0.000045955934],"category_scores_gemma":[0.0001422977,0.00012481531,0.00013071892,0.00014654218,0.00008015617,0.000002563105,0.00014644525,0.00011304879,0.0000013722837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008603409,0.00009349556,0.00045290682,0.001418077,0.00012501159,0.000024363882,0.00016853023,0.00003384561,0.9969897,0.00039925263,0.00018889092,0.000019846604],"study_design_scores_gemma":[0.010702207,0.008385784,0.0220845,0.0023765513,0.0006399936,0.00020934083,0.016346041,0.0017147686,0.925248,0.0033654466,0.006978807,0.001948536],"about_ca_topic_score_codex":0.000034890425,"about_ca_topic_score_gemma":0.0000061044534,"teacher_disagreement_score":0.07174172,"about_ca_system_score_codex":0.000027057893,"about_ca_system_score_gemma":0.000053843833,"threshold_uncertainty_score":0.50898206},"labels":[],"label_agreement":null},{"id":"W4214906120","doi":"10.1016/j.molcel.2022.02.022","title":"The case for brakes: Why restrain the size of Bax and Bak pores in outer mitochondrial membranes?","year":2022,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Biology; Mitochondrion; Cell biology; Apoptosis; Mitochondrial DNA; Membrane; Bacterial outer membrane; Biophysics; Genetics; Gene","score_opus":0.005220292780862683,"score_gpt":0.20969094394844356,"score_spread":0.20447065116758087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214906120","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5395519,0.04104571,0.0006492812,0.39964685,0.0030845075,0.006447972,0.00091979426,0.000030749718,0.008623217],"genre_scores_gemma":[0.27951792,0.0032046977,0.000982836,0.6851163,0.003930565,0.002182098,0.0041321926,0.00063294306,0.020300446],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983746,0.00026729438,0.00037680534,0.00043682024,0.0001650179,0.00037947268],"domain_scores_gemma":[0.99888927,0.00016766449,0.00019188893,0.0006770906,0.000052702908,0.00002136245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025402935,0.00028895048,0.00025177622,0.000042545274,0.00019274089,0.00005545856,0.0004485174,0.00040936982,0.000033825676],"category_scores_gemma":[0.000150928,0.00020136556,0.0002671279,0.00007818437,0.00021515465,0.000002725256,0.00020125623,0.0005325546,7.6735705e-7],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003789279,0.00004473776,0.000011652291,0.0003498671,0.00017285891,0.0020363948,0.00030009964,0.000052023395,0.3531555,0.000024614827,0.64284456,0.0006287635],"study_design_scores_gemma":[0.0009868522,0.0002681646,0.0000032309022,0.000010411446,0.000059849233,0.00012796852,0.00032052633,0.000014631739,0.07370935,0.00015379197,0.9240924,0.0002528126],"about_ca_topic_score_codex":0.00013697708,"about_ca_topic_score_gemma":0.00014374462,"teacher_disagreement_score":0.28546944,"about_ca_system_score_codex":0.000010542397,"about_ca_system_score_gemma":0.000095666,"threshold_uncertainty_score":0.8211449},"labels":[],"label_agreement":null},{"id":"W4214935896","doi":"10.1016/j.molcel.2022.02.003","title":"MFN2-driven mitochondria-to-nucleus tethering allows a non-canonical nuclear entry pathway of the mitochondrial pyruvate dehydrogenase complex","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell biology; MFN2; Lamin; Inner membrane; Mitochondrion; Nuclear lamina; Cell nucleus; mitochondrial fusion; Nucleus; Mitochondrial DNA; Biochemistry; Nuclear protein","score_opus":0.008856781476918327,"score_gpt":0.21064329106288435,"score_spread":0.20178650958596603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214935896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986887,0.000121148594,0.0031714286,0.00036341054,0.0019632508,0.0009224146,0.00016152964,0.000031209984,0.006378652],"genre_scores_gemma":[0.9884279,0.000011939735,0.0062627187,0.0028139006,0.00036721135,0.00012646487,0.00012006805,0.00011397892,0.0017558271],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974606,0.00041807845,0.00047508586,0.0007222135,0.00042352706,0.0005004859],"domain_scores_gemma":[0.99840164,0.000018584848,0.00020934003,0.0010754598,0.0000764891,0.00021850664],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013784578,0.00031912455,0.00034020847,0.00008135438,0.00033243926,0.000027920492,0.0008684042,0.00018765577,0.0006377718],"category_scores_gemma":[0.00007360589,0.00029590496,0.00046365187,0.00030457764,0.00012903876,0.000003954435,0.0011305095,0.00037198365,0.00006737572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038579764,0.00021248483,0.00011865774,0.000019303821,0.0000591755,0.000052454478,0.00020940164,0.0048443926,0.9875023,0.0000866245,0.006261703,0.00024773565],"study_design_scores_gemma":[0.0014115107,0.0005530189,0.000084075524,0.0000075862704,0.000037520866,0.00003490154,0.00011560372,0.00034991265,0.584952,0.00002559648,0.4121186,0.00030968693],"about_ca_topic_score_codex":0.000047204747,"about_ca_topic_score_gemma":0.000027596176,"teacher_disagreement_score":0.4058569,"about_ca_system_score_codex":0.00005246206,"about_ca_system_score_gemma":0.00018839673,"threshold_uncertainty_score":0.99994934},"labels":[],"label_agreement":null},{"id":"W4221095165","doi":"10.1016/j.molcel.2021.12.008","title":"Identification and functional characterization of transcriptional activators in human cells","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":132,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Proteome; Computational biology; Chromatin; Transactivation; Transcription factor; Fusion protein; Activator (genetics); Proteomics; Transcription (linguistics); Human proteome project; Interactome; Cell biology; Genetics; Gene","score_opus":0.005865599256928514,"score_gpt":0.19604770706779456,"score_spread":0.19018210781086606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221095165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940461,0.00006301583,0.00533418,0.00005403403,0.0000908081,0.00013687531,0.000027314542,0.0000036054582,0.00024407373],"genre_scores_gemma":[0.9986568,0.000008696051,0.00003210037,0.0000868794,0.000019384386,0.000039605966,0.00059120526,0.000009411393,0.0005559343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993903,0.00006720472,0.00016361491,0.00017577535,0.0001350234,0.00006806239],"domain_scores_gemma":[0.9997755,0.0000012779716,0.00007531161,0.00010369651,0.000022685545,0.000021514496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114634706,0.00006031714,0.000055212775,0.00007139452,0.00006362807,0.0000071745553,0.00004957349,0.000035031462,0.00008296909],"category_scores_gemma":[0.000003234242,0.00007387716,0.00003269138,0.0000911269,0.000026125326,0.000004917215,0.00003778114,0.000059029993,7.123945e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023450144,0.00007817634,0.0004374104,0.000010420983,0.0000041218264,7.1287656e-7,0.000027368127,0.00009065723,0.9987911,0.00028471177,0.00004840657,0.00020349359],"study_design_scores_gemma":[0.00033919825,0.0000647837,0.008437562,0.0000014456582,0.000003426157,0.0000012511205,0.00003100969,0.00004280878,0.98484373,0.0000461217,0.0061171576,0.00007150177],"about_ca_topic_score_codex":0.0000049205205,"about_ca_topic_score_gemma":8.673096e-7,"teacher_disagreement_score":0.013947336,"about_ca_system_score_codex":0.000013329842,"about_ca_system_score_gemma":0.000023464176,"threshold_uncertainty_score":0.30126232},"labels":[],"label_agreement":null},{"id":"W4225875678","doi":"10.1016/j.molcel.2022.01.025","title":"RIF1 acts in DNA repair through phosphopeptide recognition of 53BP1","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; DNA repair; Cell biology; Chromatin; Phosphopeptide; DNA; DNA damage; Phosphorylation; DNA-binding protein; Effector; Molecular biology; Genetics; Transcription factor","score_opus":0.009538286228411836,"score_gpt":0.21740857887866055,"score_spread":0.20787029265024873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225875678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.980633,0.00069348235,0.0007049947,0.000039733975,0.000155492,0.00028566064,0.00003533273,0.000031917873,0.017420352],"genre_scores_gemma":[0.9932778,0.000055567,0.004803241,0.000557699,0.000023990466,0.00008626992,0.00025723648,0.000042430747,0.0008957734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986443,0.00016761167,0.0002734582,0.0004225713,0.00023582004,0.00025625687],"domain_scores_gemma":[0.9993024,0.0000075119115,0.00012124183,0.0004814717,0.000043822223,0.000043554126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026955327,0.00015302017,0.0001673993,0.000052475632,0.000050028215,0.00000569546,0.00021535886,0.00009228514,0.00017731711],"category_scores_gemma":[0.00004827617,0.00018460343,0.00018404088,0.00020154587,0.000032639142,0.000004280189,0.00030659907,0.00014803628,0.000016653965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009035581,0.0002038862,0.00013444902,0.00002944122,0.00002119369,0.00007657426,0.00010515576,0.0002454712,0.9976349,0.00007071997,0.00086232665,0.0005255166],"study_design_scores_gemma":[0.00067691715,0.00041737405,0.000054556927,0.000008628952,0.000016427852,0.000011500301,0.00016843947,0.000058815775,0.95465356,0.0006789397,0.043054547,0.00020031806],"about_ca_topic_score_codex":0.000060444818,"about_ca_topic_score_gemma":0.000013976819,"teacher_disagreement_score":0.042981375,"about_ca_system_score_codex":0.000041129213,"about_ca_system_score_gemma":0.000079076366,"threshold_uncertainty_score":0.7527909},"labels":[],"label_agreement":null},{"id":"W4233566367","doi":"10.1016/j.molcel.2012.03.008","title":"Mechanistic Insight into the Microtubule and Actin Cytoskeleton Coupling through Dynein-Dependent RhoGEF Inhibition","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of New Brunswick; Canada Research Chairs; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Microtubule; Dynein; Biology; Cytoskeleton; Cell biology; Dynein ATPase; Actin; Dynactin; Genetics; Cell","score_opus":0.006040476553653042,"score_gpt":0.21917150038685168,"score_spread":0.21313102383319865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233566367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95765275,0.005494559,0.034283165,0.00016125421,0.00018894873,0.0003232991,0.000007978008,0.000023392786,0.0018646779],"genre_scores_gemma":[0.99626446,0.0007959222,0.0013188537,0.00091856555,0.00018028058,0.00003670687,0.00014337727,0.000047854926,0.00029397797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988559,0.000057662877,0.00020850818,0.00034834124,0.00014838389,0.00038124068],"domain_scores_gemma":[0.99934006,0.000012853469,0.000095882475,0.00040392717,0.00005149671,0.00009575569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021162133,0.00023439665,0.00014661254,0.000028900095,0.00020343521,0.000053523087,0.00014384801,0.00020200426,0.000014512428],"category_scores_gemma":[0.000025527359,0.00019508917,0.00009150612,0.00007579397,0.000074975826,0.000011536544,0.00023307197,0.00017231547,0.000030603955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023941942,0.00008490358,0.00012924465,0.000040432184,0.00002825432,0.000006459391,0.00047752814,0.00003129336,0.99811995,0.00047233992,0.0002439904,0.00034168482],"study_design_scores_gemma":[0.00040377455,0.00010821194,0.000035836427,0.000014472483,0.000055817796,0.000025759982,0.00018060068,0.00012093266,0.9705967,0.00014631331,0.028057225,0.00025436995],"about_ca_topic_score_codex":0.000084760024,"about_ca_topic_score_gemma":0.00003407146,"teacher_disagreement_score":0.038611736,"about_ca_system_score_codex":0.00002847293,"about_ca_system_score_gemma":0.000036102436,"threshold_uncertainty_score":0.7955505},"labels":[],"label_agreement":null},{"id":"W4247509559","doi":"10.1016/j.molcel.2005.07.017","title":"Crystal Structure of Bacteriophage λcII and Its DNA Complex","year":2005,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Transcription (linguistics); Bacteriophage; RNA polymerase; Molecular biology; DNA; Protein subunit; RNA; RNA polymerase II; Promoter; Polymerase; Genetics; Gene; Gene expression; Escherichia coli","score_opus":0.005657438673157806,"score_gpt":0.20400666738224074,"score_spread":0.19834922870908295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247509559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917538,0.00007136566,0.00010817129,0.00010941298,0.0000385489,0.00009394,0.0000457536,0.000011296942,0.007767686],"genre_scores_gemma":[0.9975877,0.000008813655,0.0013755184,0.00026530537,0.00001740712,7.9638454e-7,0.000014530243,0.000011629975,0.00071831886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994694,0.000019892188,0.00012655265,0.000169872,0.00007302875,0.00014124524],"domain_scores_gemma":[0.99974704,0.0000050073218,0.000054814394,0.00012565294,0.000005176446,0.00006230879],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000017721455,0.00009679842,0.00010114768,0.000016767306,0.000044307322,0.000017985858,0.000095808355,0.00004424739,0.0057584653],"category_scores_gemma":[0.0000025978331,0.0000932843,0.000041321862,0.000058547837,0.000052400257,0.000109524306,0.00012316345,0.00007362782,0.00009585437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000050789104,0.000031100957,0.000052198095,0.000008839105,0.000003933233,0.000005600373,0.00011569905,0.00005838368,0.99818397,0.0000101078085,0.000285201,0.0012399026],"study_design_scores_gemma":[0.00020904069,0.000035534842,0.023659177,0.000004453604,0.000012089653,0.000018291845,0.000015090147,0.00018244352,0.934339,0.000008710017,0.041409127,0.000107080894],"about_ca_topic_score_codex":0.000040167037,"about_ca_topic_score_gemma":0.000046488723,"teacher_disagreement_score":0.06384499,"about_ca_system_score_codex":0.000028751612,"about_ca_system_score_gemma":0.0000028668398,"threshold_uncertainty_score":0.9951504},"labels":[],"label_agreement":null},{"id":"W4253948839","doi":"10.1016/j.molcel.2012.05.013","title":"OTUB1 Co-opts Lys48-Linked Ubiquitin Recognition to Suppress E2 Enzyme Function","year":2012,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"Linker; Biology; Fusion protein; Protein Data Bank (RCSB PDB); Protein Data Bank; Protein subunit; Biochemistry; Peptide sequence; Protein structure; Computational biology; Bioinformatics; Computer science; Gene; Recombinant DNA","score_opus":0.0186377062375681,"score_gpt":0.2484181627170809,"score_spread":0.22978045647951278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253948839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9512095,0.0009239375,0.02090271,0.00016881012,0.00044934134,0.00060212193,0.00009418684,0.000060886236,0.025588492],"genre_scores_gemma":[0.9933274,0.000028583137,0.0015778663,0.0020863675,0.0005528068,0.00013722833,0.0009986497,0.000064859334,0.0012262786],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828684,0.00018098454,0.00025905363,0.00044599854,0.000232798,0.000594333],"domain_scores_gemma":[0.99898547,0.0000124906965,0.0000873815,0.00047627804,0.00010281046,0.00033555753],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035214305,0.00026852387,0.00018031451,0.000085170184,0.00010861768,0.00004404916,0.00019932006,0.00028520654,0.00032936165],"category_scores_gemma":[0.000067116474,0.0002897333,0.00015607997,0.00012567666,0.0000372064,0.000011198327,0.00012106383,0.00015682926,0.0007273129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013825779,0.00014107881,0.00022197576,0.000041260046,0.000029559778,0.00000652903,0.00009987502,0.000017974084,0.9884797,0.00003577878,0.005362235,0.005425818],"study_design_scores_gemma":[0.0004797804,0.00032155617,0.00023941266,0.000011246278,0.000036352125,0.00001016874,0.00005205497,0.000009222666,0.79433876,0.000057480127,0.20412214,0.00032180507],"about_ca_topic_score_codex":0.00001258261,"about_ca_topic_score_gemma":0.00000344195,"teacher_disagreement_score":0.1987599,"about_ca_system_score_codex":0.000023913242,"about_ca_system_score_gemma":0.000039445626,"threshold_uncertainty_score":0.9999555},"labels":[],"label_agreement":null},{"id":"W4256073793","doi":"10.1016/j.molcel.2019.06.035","title":"Transcription Restart Establishes Chromatin Accessibility after DNA Replication","year":2019,"lang":"en","type":"erratum","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre","funders":"Lundbeckfonden","keywords":"Biology; Chromatin; Genetics; Transcription (linguistics); DNA replication; Origin recognition complex; Computational biology; DNA; Cell biology; Eukaryotic DNA replication","score_opus":0.005783188342225699,"score_gpt":0.22005362096377337,"score_spread":0.21427043262154769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256073793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93157417,0.0062624244,0.003520143,0.00019596591,0.0059407633,0.0011871939,0.0003362073,0.000060106977,0.050923],"genre_scores_gemma":[0.86851394,0.00094229856,0.0015614155,0.000677292,0.0007359484,0.0002074677,0.012313097,0.00022593385,0.1148226],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971147,0.00014589504,0.00055486476,0.0014054631,0.00033685786,0.00044217834],"domain_scores_gemma":[0.9967333,0.000005647556,0.00036456346,0.0026254486,0.00017031709,0.000100716206],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003368714,0.0005164577,0.00041059288,0.00008976073,0.0000702534,0.00016414563,0.0006409812,0.0010948195,0.00010252315],"category_scores_gemma":[0.00006067298,0.00055418495,0.00036382265,0.00013058368,0.00007945353,0.000009288663,0.00020981621,0.00046891483,0.000089153385],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066855326,0.00012599054,0.000099765384,0.00053451344,0.0000530739,0.000014854605,0.000046565936,0.00004242593,0.8271883,0.000009653166,0.1711149,0.00070306787],"study_design_scores_gemma":[0.00071969046,0.00035805037,0.0025103535,0.00013376374,0.0001827892,0.000011146971,0.000040602616,0.00085411273,0.28816155,0.00035223356,0.7055047,0.0011709774],"about_ca_topic_score_codex":0.00003062934,"about_ca_topic_score_gemma":0.00006161215,"teacher_disagreement_score":0.5390268,"about_ca_system_score_codex":0.00008955325,"about_ca_system_score_gemma":0.0003455046,"threshold_uncertainty_score":0.99969095},"labels":[],"label_agreement":null},{"id":"W4283372776","doi":"10.1016/j.molcel.2022.06.005","title":"Methionine oxidation activates pyruvate kinase M2 to promote pancreatic cancer metastasis","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"MSRA; Biology; PKM2; Methionine; Pancreatic cancer; Metastasis; Cancer research; Pyruvate kinase; Cell biology; Biochemistry; Metabolism; Cancer; Glycolysis; Amino acid; Genetics","score_opus":0.008962032232641753,"score_gpt":0.2502191793818909,"score_spread":0.24125714714924917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283372776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98725724,0.006427998,0.0036117735,0.000568811,0.000663092,0.0005343985,0.00009832671,0.000029313247,0.0008090377],"genre_scores_gemma":[0.9907523,0.00047182332,0.0030071544,0.0016660226,0.00037054042,0.0006189797,0.00032047695,0.000072164825,0.002720578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835527,0.00017085377,0.00022600048,0.0005656405,0.00030983886,0.0003724127],"domain_scores_gemma":[0.9991163,0.000006069816,0.000111388625,0.0005158895,0.00008634778,0.00016398357],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002751982,0.00023124811,0.00024654073,0.00010411774,0.00020567414,0.00003445595,0.00027769216,0.000068277644,0.00030853332],"category_scores_gemma":[0.000047716043,0.0002539657,0.00016300802,0.0003298733,0.000027328715,0.000005785088,0.00031754444,0.00016058404,0.000017681115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010880616,0.00009667554,0.000038644594,0.000026667223,0.00009401858,0.0000074668615,0.000107012675,0.0017347449,0.9803574,0.000027858989,0.0028851398,0.014515535],"study_design_scores_gemma":[0.00037736006,0.00013533891,0.000102155485,0.000003901185,0.00009218915,0.0000024031824,0.000045441833,0.000026749134,0.6160715,0.000031996125,0.3829102,0.00020072197],"about_ca_topic_score_codex":0.0002517068,"about_ca_topic_score_gemma":0.000029296572,"teacher_disagreement_score":0.38002506,"about_ca_system_score_codex":0.0000571668,"about_ca_system_score_gemma":0.00013899458,"threshold_uncertainty_score":0.99999124},"labels":[],"label_agreement":null},{"id":"W4283389428","doi":"10.1016/j.molcel.2022.06.004","title":"Mitochondrial protein import stress regulates the LC3 lipidation step of mitophagy through NLRX1 and RRBP1","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; York University; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Mitophagy; Biology; Cell biology; Mitochondrion; Lipid-anchored protein; Endoplasmic reticulum; Autophagy; Biochemistry; Apoptosis","score_opus":0.0057665647058536005,"score_gpt":0.22810780098432537,"score_spread":0.22234123627847177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283389428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99175775,0.0046165283,0.00048414205,0.0005701118,0.0001905543,0.0008897853,0.000019138013,0.000025428513,0.0014465791],"genre_scores_gemma":[0.9975336,0.000035913425,0.00055965834,0.00048091175,0.00009525034,0.000124524,0.000064215405,0.000026189977,0.0010797192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897707,0.00010865307,0.00022873492,0.00022657064,0.0003076595,0.00015128766],"domain_scores_gemma":[0.9993785,0.000018982606,0.00012212586,0.00039903654,0.00003938354,0.000041954692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008629834,0.00012326268,0.00018996448,0.00004139626,0.00012484053,0.000012017733,0.000119418626,0.000046824676,0.00021600649],"category_scores_gemma":[0.00001292047,0.00009513076,0.00009713145,0.00016694491,0.00008843806,0.00003540693,0.000097740616,0.00015838488,0.0000027854437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054512627,0.00040777228,0.0011616868,0.00017639642,0.0001555343,0.00013253653,0.0005664244,0.000077415665,0.99261856,0.0012736663,0.0011615681,0.0017233068],"study_design_scores_gemma":[0.0021475796,0.00035389827,0.0016988077,0.000035832418,0.0001221826,0.000010719293,0.0003687795,0.00024834368,0.9811772,0.0012830762,0.012440865,0.000112710346],"about_ca_topic_score_codex":0.00007025907,"about_ca_topic_score_gemma":0.0000016894572,"teacher_disagreement_score":0.01144136,"about_ca_system_score_codex":0.000025424168,"about_ca_system_score_gemma":0.00008106413,"threshold_uncertainty_score":0.38793197},"labels":[],"label_agreement":null},{"id":"W4284700495","doi":"10.1016/j.molcel.2022.06.011","title":"Captured snapshots of PARP1 in the active state reveal the mechanics of PARP1 allostery","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Cancer Institute; Cancer Research UK","keywords":"PARP1; Poly ADP ribose polymerase; NAD+ kinase; Biology; Allosteric regulation; Active site; Biophysics; Biochemistry; DNA damage; Molecular mechanics; DNA; Cell biology; Enzyme; Molecular dynamics; Chemistry; Polymerase; Computational chemistry","score_opus":0.014311591857158225,"score_gpt":0.2558549279518664,"score_spread":0.24154333609470816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4284700495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986488,0.0013835733,0.0014721614,0.0028441118,0.00019305138,0.0011130482,0.0001460326,0.000011692602,0.006348333],"genre_scores_gemma":[0.99669456,0.00005445378,0.000096795775,0.0027760225,0.000017301834,0.0001297371,0.00004043308,0.000022090642,0.00016860383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832207,0.00043139592,0.00031840618,0.00018813353,0.0005497955,0.00019017403],"domain_scores_gemma":[0.9990779,0.00009630586,0.00021374832,0.0005184401,0.00006209638,0.000031514886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054792006,0.00012200928,0.00024778192,0.00007116495,0.000050239792,0.0000038762887,0.00025832778,0.000036578887,0.00019358119],"category_scores_gemma":[0.000018847537,0.00008256615,0.00012841716,0.00032486563,0.00005821708,0.000019998939,0.000081537626,0.00036181966,0.0000021403196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011262012,0.0004993216,0.00018193453,0.00012804875,0.00012771136,0.00027176458,0.013544684,0.002273269,0.9764584,0.00044150368,0.0040241885,0.00092297595],"study_design_scores_gemma":[0.0032504096,0.0006173466,0.0005514866,0.000050944378,0.00008859947,0.00004075775,0.0034448295,0.00030931004,0.97600865,0.0034895851,0.012002812,0.00014528084],"about_ca_topic_score_codex":0.00009489449,"about_ca_topic_score_gemma":0.0000103811835,"teacher_disagreement_score":0.010206565,"about_ca_system_score_codex":0.00008704679,"about_ca_system_score_gemma":0.000121243844,"threshold_uncertainty_score":0.336695},"labels":[],"label_agreement":null},{"id":"W4288737722","doi":"10.1016/j.molcel.2022.06.019","title":"HelR is a helicase-like protein that protects RNA polymerase from rifamycin antibiotics","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; McMaster University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Rifamycin; Biology; RNA polymerase; Helicase; Microbiology; Polymerase; Transcription (linguistics); Antibiotics; RNA; Virology; DNA; Genetics; Gene","score_opus":0.015813224218640266,"score_gpt":0.24621854303361257,"score_spread":0.2304053188149723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288737722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889089,0.001994844,0.00032341483,0.0030259788,0.00009596909,0.0019508791,0.00028757047,0.00009773766,0.003314709],"genre_scores_gemma":[0.99135005,0.000044219327,0.0013085053,0.004740619,0.00008450572,0.00012418145,0.00019935812,0.00007035525,0.0020782237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99751294,0.00021792833,0.0002198116,0.0005528304,0.00092233997,0.0005741526],"domain_scores_gemma":[0.99860954,0.000039682403,0.000088249166,0.00076194253,0.0000561116,0.00044444183],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019163173,0.00024755578,0.000328229,0.00016766778,0.00019906917,0.00005549316,0.0002377478,0.0000876571,0.003550064],"category_scores_gemma":[0.00006892458,0.00024166981,0.0002029158,0.00036183003,0.00005157477,0.000047515245,0.00034093283,0.0005575252,0.00026894556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036586725,0.0006177034,0.0015800311,0.00014883147,0.000062879655,0.0036286907,0.00019765922,0.000001878953,0.9854987,0.000012229786,0.0066251745,0.0012603282],"study_design_scores_gemma":[0.0019288193,0.0007958411,0.00079509284,0.000062892264,0.000056332647,0.000024489078,0.00012636908,0.00017192223,0.9715345,0.00005888132,0.024197467,0.0002474244],"about_ca_topic_score_codex":0.0012165096,"about_ca_topic_score_gemma":0.0000059359077,"teacher_disagreement_score":0.017572293,"about_ca_system_score_codex":0.000112725436,"about_ca_system_score_gemma":0.00022580758,"threshold_uncertainty_score":0.9973608},"labels":[],"label_agreement":null},{"id":"W4288950872","doi":"10.1016/j.molcel.2022.06.031","title":"Regulation of alternative polyadenylation by the C2H2-zinc-finger protein Sp1","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of New Brunswick; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Polyadenylation; Zinc finger; Sp1 transcription factor; Repressor; Untranslated region; Cleavage and polyadenylation specificity factor; RNA; Three prime untranslated region; Transcription factor; Transcription (linguistics); Gene; Genetics; Messenger RNA; Cell biology; Molecular biology; Gene expression; Promoter","score_opus":0.006714788650070376,"score_gpt":0.23325868543026423,"score_spread":0.22654389678019385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288950872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898506,0.0007295817,0.0062812506,0.0003281531,0.000033995704,0.00034432329,0.000018378654,0.000004748609,0.002408969],"genre_scores_gemma":[0.9930802,0.0000068788504,0.00018014596,0.00012370218,0.0000339801,0.00006611967,0.0001367834,0.000017344577,0.00635485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989981,0.00017937063,0.00014189884,0.00020815575,0.00030450424,0.00016795254],"domain_scores_gemma":[0.999523,0.000006127027,0.00009810965,0.00028575776,0.000051358184,0.00003566801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002529815,0.000084255065,0.00007135622,0.000033004017,0.00014099696,0.000013873659,0.00021865228,0.00003582952,0.000072463066],"category_scores_gemma":[0.000028746887,0.00007225946,0.00006905923,0.00011003115,0.000043211785,0.0000027358642,0.0001815489,0.00011719074,0.0000035677936],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005433366,0.000041653697,0.00010126963,0.000007736082,0.000016395259,0.000002388043,0.00004087847,0.0009011329,0.9962783,0.00011523523,0.0013618802,0.001078827],"study_design_scores_gemma":[0.00030548274,0.0002335923,0.00019307795,0.0000027740023,0.000005534846,0.000002664995,0.000068554,0.001147364,0.9852837,0.00014640436,0.012527719,0.00008313443],"about_ca_topic_score_codex":0.00010820738,"about_ca_topic_score_gemma":0.0000032389962,"teacher_disagreement_score":0.011165839,"about_ca_system_score_codex":0.00002221559,"about_ca_system_score_gemma":0.000041001134,"threshold_uncertainty_score":0.29466552},"labels":[],"label_agreement":null},{"id":"W4288950922","doi":"10.1016/j.molcel.2022.06.036","title":"Systematic exploration of dynamic splicing networks reveals conserved multistage regulators of neurogenesis","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"National Institutes of Health; University of Toronto; European Commission; Canada First Research Excellence Fund; Government of Ontario; Canadian Institutes of Health Research; Mitacs; Ontario Genomics; Genome Canada","keywords":"Neurogenesis; Biology; Alternative splicing; RNA splicing; Exon; Splicing factor; Neural stem cell; Cell biology; Genetics; Stem cell; Gene; RNA","score_opus":0.009388622461572226,"score_gpt":0.2390231089349369,"score_spread":0.22963448647336465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288950922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9769168,0.00241683,0.019954104,0.00002150751,0.00005254005,0.0005091137,0.000015483065,0.000007328188,0.00010630105],"genre_scores_gemma":[0.9986373,0.00005512077,0.0003799588,0.00006011827,0.000007701568,0.00007290678,0.00008373133,0.000032887383,0.0006702596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983704,0.00039302956,0.00045361024,0.00027495905,0.0002847241,0.00022329071],"domain_scores_gemma":[0.99900234,0.000026785665,0.0002906023,0.00052493875,0.000089709145,0.00006563166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047005725,0.00013110928,0.00028850773,0.00008336854,0.00008627243,0.000008570632,0.00024887203,0.00005800682,0.000012278186],"category_scores_gemma":[0.00007815958,0.0001393044,0.00015793437,0.0002037388,0.00004818982,0.0000046411405,0.00021529569,0.000090790774,7.38218e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005428629,0.00005643118,0.00025678452,0.0015181452,0.000057784426,0.000017924809,0.00003224509,0.016425667,0.9814552,0.000038058482,0.000036952006,0.000050502862],"study_design_scores_gemma":[0.0006301738,0.00043480817,0.00022887465,0.0001688684,0.00008446597,0.000009776774,0.0003800361,0.028265016,0.9695479,0.000024683683,0.00003225574,0.00019311027],"about_ca_topic_score_codex":0.000050818915,"about_ca_topic_score_gemma":0.000012156133,"teacher_disagreement_score":0.021720523,"about_ca_system_score_codex":0.000018404466,"about_ca_system_score_gemma":0.000046440502,"threshold_uncertainty_score":0.56806684},"labels":[],"label_agreement":null},{"id":"W4291582562","doi":"10.1016/j.molcel.2022.07.009","title":"Reactive metabolic byproducts contribute to antibiotic lethality under anaerobic conditions","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Defense Threat Reduction Agency; National Institute of Allergy and Infectious Diseases; Broad Institute; Banting Research Foundation; National Institutes of Health; National Science Foundation; James S. McDonnell Foundation; Harvard University","keywords":"Lethality; Antibiotics; Anaerobic exercise; Biology; Microbiology; Reactive oxygen species; Bacteria; Biochemistry; Toxicology; Genetics; Physiology","score_opus":0.010973539638099357,"score_gpt":0.2719342323779247,"score_spread":0.2609606927398253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4291582562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99253815,0.0013989588,0.0011132876,0.0015449999,0.00018772022,0.00057056145,0.00036877015,0.000025527783,0.0022520076],"genre_scores_gemma":[0.9962819,0.00003073725,0.00037795628,0.0012218935,0.000065423555,0.00008730886,0.0005416907,0.00003693894,0.0013561117],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806225,0.00034252382,0.00018568592,0.00061828166,0.00031641225,0.00047483723],"domain_scores_gemma":[0.99896586,0.000012846819,0.000069397014,0.00063585164,0.00014908164,0.00016696169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003158807,0.00020313458,0.00023719357,0.00009133257,0.00033811215,0.00003480679,0.0003109539,0.000053647334,0.00008589765],"category_scores_gemma":[0.00013173187,0.00022219907,0.00012787827,0.00031824037,0.000092043294,0.0000044018047,0.00076005625,0.00019393397,0.000047643283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006446804,0.00015000405,0.00019676329,0.000010740665,0.0001414938,0.000040335566,0.000043749504,0.00059502915,0.9940798,0.00027922587,0.0043329964,0.00006537659],"study_design_scores_gemma":[0.0005602486,0.0002959303,0.007798857,0.000002319708,0.00004389945,0.000008179697,0.00017673301,0.000004464497,0.8863811,0.00010096179,0.10436794,0.00025937802],"about_ca_topic_score_codex":0.00007597058,"about_ca_topic_score_gemma":0.000015354739,"teacher_disagreement_score":0.10769873,"about_ca_system_score_codex":0.000058192916,"about_ca_system_score_gemma":0.00013592806,"threshold_uncertainty_score":0.9061015},"labels":[],"label_agreement":null},{"id":"W4294190705","doi":"10.1016/j.molcel.2022.08.010","title":"SLC4A7 and mTORC1 raise nucleotide synthesis with bicarbonate","year":2022,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"mTORC1; Nucleotide; Bicarbonate; Biology; Cell growth; Biochemistry; Molecular biology; Gene; Signal transduction; PI3K/AKT/mTOR pathway; Endocrinology","score_opus":0.0038995091684246347,"score_gpt":0.17754390103494458,"score_spread":0.17364439186651995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294190705","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5287095,0.080001004,0.004340988,0.2187054,0.00211779,0.0035844983,0.0013070608,0.00036530028,0.16086847],"genre_scores_gemma":[0.2039641,0.0030859604,0.0031324727,0.7510314,0.0031476317,0.0006103138,0.0021737446,0.0008707495,0.0319836],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978165,0.00016871371,0.00023203024,0.00089744147,0.00036361188,0.0005217148],"domain_scores_gemma":[0.9988161,0.000020681384,0.00016930216,0.0008323767,0.00004849623,0.000113075905],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012405384,0.0005043745,0.00042337444,0.00010346557,0.00011851517,0.00005460106,0.00039095207,0.0005117044,0.00023961697],"category_scores_gemma":[0.000028127748,0.00046058322,0.00018534856,0.00010512499,0.00014826302,0.000002747311,0.0003854976,0.0007465048,0.000013494863],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111176254,0.000051591735,0.000058850437,0.00021126107,0.000265269,0.0017600125,0.00003413862,0.000054833166,0.27866116,0.000027868917,0.7173439,0.0014199116],"study_design_scores_gemma":[0.00036210066,0.00017544607,0.000021694199,0.000014531115,0.00020753584,0.000046974706,0.000014615915,0.000006539676,0.117619514,0.000013045438,0.88095903,0.0005589725],"about_ca_topic_score_codex":0.0000496888,"about_ca_topic_score_gemma":0.000003314295,"teacher_disagreement_score":0.53232604,"about_ca_system_score_codex":0.000018615261,"about_ca_system_score_gemma":0.0001046533,"threshold_uncertainty_score":0.9997846},"labels":[],"label_agreement":null},{"id":"W4294782877","doi":"10.1016/j.molcel.2022.08.015","title":"An ADP-ribosyltransferase toxin kills bacterial cells by modifying structured non-coding RNAs","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; McMaster University","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Canadian Institutes of Health Research","keywords":"Biology; Ribozyme; RNA; Ribonuclease; ADP-ribosylation; Microbiology; Transfer RNA; Secretion; Cell biology; Enzyme; Biochemistry; Gene","score_opus":0.004515751041375376,"score_gpt":0.19829045376979199,"score_spread":0.1937747027284166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294782877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96962154,0.0008198668,0.025220012,0.00005471886,0.0025696822,0.000517442,0.00047735038,0.00018328124,0.00053610606],"genre_scores_gemma":[0.9968783,0.0000308625,0.0006003879,0.0005673391,0.000036313053,0.000071099836,0.0008265244,0.000107005864,0.0008821417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977767,0.0004314307,0.00037933563,0.0006226163,0.00011033161,0.0006795997],"domain_scores_gemma":[0.9991339,0.000028436907,0.00011306033,0.00062596047,0.000030105153,0.00006857826],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026343623,0.00035795194,0.0003788748,0.00012807768,0.0005424079,0.00006600926,0.00062554,0.00023377301,0.0039180643],"category_scores_gemma":[0.0000063383327,0.00038916068,0.00019533053,0.0001760948,0.0000682223,0.00012575588,0.00017403412,0.0006674334,0.000102160106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016858891,0.00023646066,0.0000043699592,0.000015803284,0.000064694905,0.00005884313,0.0005684342,0.00026962484,0.99540704,0.00013098247,0.0017564822,0.00131868],"study_design_scores_gemma":[0.0021762762,0.0005174363,0.0000133448675,0.0000061789965,0.000049517927,0.000022860704,0.00033306982,0.00006265911,0.94285834,0.00008458825,0.053431317,0.0004444391],"about_ca_topic_score_codex":0.00013040086,"about_ca_topic_score_gemma":0.0000041977632,"teacher_disagreement_score":0.05254872,"about_ca_system_score_codex":0.00009669619,"about_ca_system_score_gemma":0.000073401934,"threshold_uncertainty_score":0.99985605},"labels":[],"label_agreement":null},{"id":"W4295948384","doi":"10.1016/j.molcel.2022.08.027","title":"Control of ribosomal RNA synthesis by hematopoietic transcription factors","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of General Medical Sciences; National Cancer Institute; National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; American Heart Association; Damon Runyon Cancer Research Foundation; Canadian Institutes of Health Research; American Society of Hematology; American Cancer Society; Alex's Lemonade Stand Foundation for Childhood Cancer; Marsden Fund; Cancer Prevention and Research Institute of Texas","keywords":"Biology; Ribosomal RNA; RNA polymerase I; Transcription (linguistics); Transcription factor; RNA polymerase II; Genetics; General transcription factor; RNA; Cell biology; Computational biology; Promoter; Gene; Gene expression; RNA polymerase","score_opus":0.005135054712384612,"score_gpt":0.19505144404135846,"score_spread":0.18991638932897384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295948384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9691035,0.0020486924,0.026823275,0.0001063135,0.0000754586,0.00015727135,0.00022548273,0.0000079920155,0.0014519696],"genre_scores_gemma":[0.99915254,0.000031663098,0.00007622273,0.00012608124,0.000011861749,0.00009132959,0.00012745759,0.000022156999,0.0003606736],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991614,0.00009609142,0.00018907565,0.00023239892,0.00017179514,0.0001492199],"domain_scores_gemma":[0.99953634,0.0000065755635,0.000089045156,0.00029071714,0.000031100637,0.000046244844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009223502,0.00010901946,0.00012616816,0.00002997597,0.00008913038,0.0000075005933,0.000183084,0.000051241546,0.00019628479],"category_scores_gemma":[0.000010078864,0.00011442649,0.00014089646,0.000076415046,0.000039821203,0.0000017412381,0.000029122457,0.000067819965,0.0000022641736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032010932,0.00011904931,0.00022576212,0.000014050828,0.000028886976,0.0000015792245,0.000035172543,0.0003881611,0.9976929,0.00008615719,0.0010911451,0.00028516573],"study_design_scores_gemma":[0.00036298443,0.00012703091,0.000097282275,0.0000017338571,0.00004057316,0.0000018129248,0.00011165037,0.0000648179,0.9703327,0.00002308655,0.028710224,0.00012613166],"about_ca_topic_score_codex":0.00002981201,"about_ca_topic_score_gemma":7.917376e-7,"teacher_disagreement_score":0.03004901,"about_ca_system_score_codex":0.00001746733,"about_ca_system_score_gemma":0.000036649562,"threshold_uncertainty_score":0.46661767},"labels":[],"label_agreement":null},{"id":"W4302424796","doi":"10.1016/j.molcel.2022.09.007","title":"Histone methylation antagonism drives tumor immune evasion in squamous cell carcinomas","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; McGill University; Princess Margaret Cancer Centre; McGill Genome Centre","funders":"National Institute of Dental and Craniofacial Research; National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institutes of Health","keywords":"Biology; Cancer research; DNA methylation; Chromatin; Immune system; Interferon; Epigenomics; Histone; Epigenetics; Innate immune system; Chromatin immunoprecipitation; Immunology; DNA; Gene expression; Genetics; Gene; Promoter","score_opus":0.007126746983249766,"score_gpt":0.23639000798261287,"score_spread":0.2292632609993631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4302424796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9762519,0.014197236,0.0031405606,0.00006598047,0.00026709036,0.0003243441,0.000018217632,0.000014634122,0.0057200254],"genre_scores_gemma":[0.99753445,0.00007952948,0.00079520186,0.00014106989,0.000049756054,0.00006751774,0.00046556402,0.00004991773,0.00081697723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982723,0.00029083656,0.00034735043,0.0004959448,0.00028811125,0.0003054699],"domain_scores_gemma":[0.99924356,0.000014778751,0.00015384586,0.00046826273,0.000047290392,0.00007227658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003768596,0.00020309484,0.00018490359,0.00014534398,0.00016544398,0.000019487941,0.00023674408,0.00008686484,0.00007029721],"category_scores_gemma":[0.00003013178,0.00024080776,0.00013743858,0.00020670982,0.000040491494,0.00000415161,0.00027924925,0.00020777438,0.000011618552],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052619824,0.00018829598,0.0014594485,0.000021960916,0.0000037335515,0.00004392371,0.0001498668,0.006339999,0.99120057,0.00002245298,0.00004214396,0.00047496764],"study_design_scores_gemma":[0.001021555,0.00041704782,0.0023198281,0.000001564877,0.000018632498,0.0000031435527,0.00013588791,0.00059710623,0.9781134,0.00018181761,0.016907303,0.0002826957],"about_ca_topic_score_codex":0.00013561998,"about_ca_topic_score_gemma":0.00001154904,"teacher_disagreement_score":0.021282556,"about_ca_system_score_codex":0.000087506036,"about_ca_system_score_gemma":0.00008918732,"threshold_uncertainty_score":0.9819855},"labels":[],"label_agreement":null},{"id":"W4304143157","doi":"10.1016/j.molcel.2022.09.019","title":"Nuclear mRNA metabolism drives selective basket assembly on a subset of nuclear pore complexes in budding yeast","year":2022,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health; Canada Foundation for Innovation","keywords":"Biology; Nuclear pore; Nucleoplasm; Cell biology; Nucleoporin; Nuclear transport; RNA; Messenger RNA; Nuclear export signal; RNA-binding protein; Cytoplasm; Nuclear lamina; RNA polymerase II; Transcription (linguistics); Nuclear protein; Nucleolus; Cell nucleus; Transcription factor; Gene expression; Genetics; Gene","score_opus":0.007586465207125954,"score_gpt":0.23583756287820143,"score_spread":0.2282510976710755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304143157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99356246,0.00030957523,0.000045671943,0.00010759282,0.000041638854,0.00020952523,0.000053975607,0.000011622223,0.0056579593],"genre_scores_gemma":[0.99872166,0.000037031106,0.00040795244,0.0003658575,0.000029896033,0.000015708125,0.00010071934,0.000055970628,0.0002652227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99841195,0.00025018599,0.00021700904,0.00040320153,0.00034277904,0.00037487785],"domain_scores_gemma":[0.9994093,0.00001066892,0.00009531133,0.00033659925,0.000052544394,0.000095546464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002548108,0.00017038923,0.00023414046,0.00015863251,0.00013527428,0.000022814822,0.0003509047,0.00006986448,0.00008691773],"category_scores_gemma":[0.000044489567,0.00018546115,0.00014128714,0.00026470242,0.000051552957,0.0000046144737,0.00032563633,0.00028183102,0.000008476218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021476063,0.00018162723,0.00028322753,0.000019408822,0.00003859555,0.00006798756,0.00018929181,0.00077858265,0.99609953,0.0006631361,0.0012372109,0.00022662454],"study_design_scores_gemma":[0.0014604613,0.0009876455,0.00396463,0.000020438983,0.00002128057,0.000019384437,0.0011521381,0.0013139099,0.9480113,0.00009009683,0.042579286,0.00037947178],"about_ca_topic_score_codex":0.00010473541,"about_ca_topic_score_gemma":0.000012398919,"teacher_disagreement_score":0.04808829,"about_ca_system_score_codex":0.00003693942,"about_ca_system_score_gemma":0.000059120004,"threshold_uncertainty_score":0.75628865},"labels":[],"label_agreement":null},{"id":"W4313529454","doi":"10.1016/j.molcel.2022.12.026","title":"Exclusion of m6A from splice-site proximal regions by the exon junction complex dictates m6A topologies and mRNA stability","year":2023,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":201,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Horizon 2020; European Research Council; Israel Science Foundation; Horizon 2020 Framework Programme; H2020 European Research Council; Centre National de la Recherche Scientifique; Austrian Science Fund; Agence Nationale de la Recherche; Weizmann Institute of Science; Azrieli Foundation; Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale; European Commission","keywords":"Biology; Exon; Intron; RNA splicing; splice; In silico; Messenger RNA; Cell biology; Alternative splicing; Cytoplasm; Splice site mutation; Genetics; Computational biology; RNA; Gene","score_opus":0.021637061728498712,"score_gpt":0.24500715009792431,"score_spread":0.2233700883694256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313529454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924901,0.0019025158,0.0036727155,0.0007836361,0.00006011791,0.00023488738,0.00009096968,0.000023238194,0.00074179255],"genre_scores_gemma":[0.99790204,0.0008060949,0.0002323615,0.0001162411,0.000032362528,0.000039989372,0.00053100707,0.000014157082,0.0003257285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916536,0.000082896506,0.0001659905,0.000314035,0.00011696858,0.00015476573],"domain_scores_gemma":[0.9993476,0.00002260791,0.00008661155,0.00044575028,0.00006006142,0.0000373531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001305431,0.00011527218,0.00010976116,0.00002216533,0.00013381786,0.000015822785,0.00013939882,0.000091954964,0.000026321746],"category_scores_gemma":[0.000032150587,0.000088389985,0.00006440063,0.0001236355,0.00018628621,0.000004006984,0.00016844741,0.00006735516,0.00000634773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038123453,0.00004084751,0.0014191571,0.000015269487,0.000015945865,0.0000010396166,0.00012683576,0.000040306186,0.9924085,0.000034129524,0.004625264,0.0012345377],"study_design_scores_gemma":[0.00038072953,0.00014552027,0.010236032,0.000007034956,0.00003395148,0.0000011038114,0.00059005973,0.0006783989,0.9542713,0.00047843394,0.033029027,0.00014841041],"about_ca_topic_score_codex":0.00033407952,"about_ca_topic_score_gemma":0.000044331522,"teacher_disagreement_score":0.038137246,"about_ca_system_score_codex":0.000010693071,"about_ca_system_score_gemma":0.000023795023,"threshold_uncertainty_score":0.3604439},"labels":[],"label_agreement":null},{"id":"W4317436165","doi":"10.1016/j.molcel.2022.12.028","title":"SMARCA4 vulnerability in H3K27M midline glioma: A silver bullet for a lethal disease","year":2023,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"National Institutes of Health; Genome Canada; Alex's Lemonade Stand Foundation for Childhood Cancer","keywords":"Glioma; Biology; Epigenetics; Cancer research; Physics; Internal medicine; Genetics; Medicine; Gene","score_opus":0.012037146573044867,"score_gpt":0.27076210941725787,"score_spread":0.258724962844213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317436165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937538,0.000969928,0.0037640494,0.00046416858,0.00012336383,0.00038205192,0.000075922144,0.000038887814,0.00042783254],"genre_scores_gemma":[0.997431,0.000027969734,0.00067213125,0.00028288743,0.000113065675,0.00016752395,0.00042237918,0.00004040224,0.0008426845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987003,0.0000663127,0.00022829715,0.0005066749,0.00014567732,0.00035269037],"domain_scores_gemma":[0.99927944,0.000018475876,0.000042190593,0.00046678126,0.00006214799,0.00013098572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028980375,0.00017527705,0.0001576987,0.00006774336,0.000051541476,0.000018795894,0.00017608133,0.00011882989,0.000025022762],"category_scores_gemma":[0.00013674928,0.00017951753,0.00018907164,0.00020945873,0.000049495986,0.0000018045328,0.00010677296,0.00008750201,0.000026877988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002447493,0.00014784042,0.0005753036,0.00016418172,0.000016724505,0.0001147924,0.000036597572,0.0049412763,0.9884571,0.000018879598,0.0044871825,0.00079541275],"study_design_scores_gemma":[0.004232972,0.00031573948,0.0017080129,0.00004921481,0.00005995664,0.000009293676,0.000070081755,0.022341201,0.9135897,0.0014615334,0.05541418,0.0007481017],"about_ca_topic_score_codex":0.00003543829,"about_ca_topic_score_gemma":0.00001626855,"teacher_disagreement_score":0.074867345,"about_ca_system_score_codex":0.000026845351,"about_ca_system_score_gemma":0.0001114709,"threshold_uncertainty_score":0.73205125},"labels":[],"label_agreement":null},{"id":"W4322762568","doi":"10.1016/j.molcel.2023.02.005","title":"The winding road toward transcriptional repression","year":2023,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Enhancer; Psychological repression; Downregulation and upregulation; Cell biology; Regulation of gene expression; Genetics; Transcriptional regulation; Transition (genetics); Gene; Gene expression","score_opus":0.010155877917398524,"score_gpt":0.21703227332612526,"score_spread":0.20687639540872674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322762568","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2534004,0.016271414,0.013673294,0.67371464,0.007977919,0.0022655947,0.0007024631,0.00029801918,0.03169629],"genre_scores_gemma":[0.31269267,0.0045364574,0.0022444397,0.52468914,0.012189184,0.00045469461,0.019422075,0.0012877395,0.12248361],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982116,0.00010685611,0.0003009497,0.00059832184,0.00032529456,0.0004569418],"domain_scores_gemma":[0.9989584,0.000015444448,0.00015534401,0.0007576558,0.00006212718,0.000051012794],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020101707,0.00032064103,0.00018908002,0.000045277222,0.0002173863,0.0001142328,0.00059769425,0.0007815005,0.000013430286],"category_scores_gemma":[0.000026987522,0.00026202638,0.00033569604,0.000079314304,0.00008045263,0.0000012715951,0.0001937921,0.0006688235,0.00009083234],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010465811,0.000009850443,0.00000731253,0.00006930969,0.000070119946,0.00016160021,0.000027090586,0.0001986486,0.4336642,0.000014510285,0.5649892,0.00077768514],"study_design_scores_gemma":[0.0002339227,0.000069399015,0.00005212384,0.00002848896,0.000047816062,0.000013967165,0.00002207304,0.00029604466,0.032170728,0.00027173193,0.9664224,0.0003713534],"about_ca_topic_score_codex":0.000014883129,"about_ca_topic_score_gemma":0.0000049945043,"teacher_disagreement_score":0.40149346,"about_ca_system_score_codex":0.000030731124,"about_ca_system_score_gemma":0.0001030568,"threshold_uncertainty_score":0.9999832},"labels":[],"label_agreement":null},{"id":"W4327575293","doi":"10.1016/j.molcel.2023.02.018","title":"A central chaperone-like role for 14-3-3 proteins in human cells","year":2023,"lang":"en","type":"article","venue":"Molecular Cell","topic":"14-3-3 protein interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; Canada Research Chairs; Canada Foundation for Innovation; Canadian Institutes of Health Research; Ontario Genomics; Genome Canada","keywords":"Biology; Chaperone (clinical); Cell biology; Computational biology","score_opus":0.00772552760995717,"score_gpt":0.24637987096426658,"score_spread":0.2386543433543094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327575293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895502,0.0002270585,0.00502887,0.00015883605,0.0002687512,0.001345972,0.000050111867,0.000060313658,0.003309939],"genre_scores_gemma":[0.99236184,0.000020383048,0.0012590428,0.00025056757,0.00012234256,0.00063597556,0.00032194925,0.00007010759,0.004957814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847776,0.00005747051,0.00024292785,0.00050113356,0.00014321828,0.0005774761],"domain_scores_gemma":[0.99930245,0.000007880652,0.00006966475,0.0004552576,0.000057884798,0.000106894724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013961508,0.00020318257,0.00015481209,0.00012262263,0.0000964759,0.000036616104,0.00026420187,0.00018515144,0.00003999616],"category_scores_gemma":[0.000030404532,0.00022866916,0.00017067028,0.00020544074,0.000042696316,0.0000052883793,0.00014097994,0.00014101091,0.00007004179],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035100584,0.00011360892,0.00013152446,0.000036188576,0.00001799375,0.00002177405,0.000098368444,0.0005532592,0.99641746,0.000061036735,0.0021679779,0.000345725],"study_design_scores_gemma":[0.00077594834,0.00025013273,0.00019074553,0.0000147656265,0.000010469601,0.0000022860515,0.000087501154,0.0002663966,0.9044207,0.00023688427,0.09350143,0.00024275809],"about_ca_topic_score_codex":0.000063899584,"about_ca_topic_score_gemma":0.00009106966,"teacher_disagreement_score":0.09199676,"about_ca_system_score_codex":0.0000360108,"about_ca_system_score_gemma":0.000058087564,"threshold_uncertainty_score":0.93248576},"labels":[],"label_agreement":null},{"id":"W4361002012","doi":"10.1016/j.molcel.2023.03.005","title":"Ferroptosis: A flexible constellation of related biochemical mechanisms","year":2023,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Ferroptosis and cancer prognosis","field":"Medicine","cited_by":200,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Biology; Constellation; Computational biology; Cell biology","score_opus":0.045070389512088256,"score_gpt":0.3212561821711186,"score_spread":0.27618579265903037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361002012","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000077288925,0.98811585,0.00033070153,0.000033241533,0.00014463729,0.0010989773,0.000030698917,0.00015982117,0.010008805],"genre_scores_gemma":[0.0010220743,0.9968496,0.0007624037,0.00005074181,0.000026148167,0.00007158786,0.00035330126,0.00014455646,0.00071960455],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99785954,0.00009736496,0.0008374175,0.0005095437,0.00040996692,0.00028618905],"domain_scores_gemma":[0.99877006,0.000042321528,0.00040343375,0.00054653967,0.000095617055,0.00014204223],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001984464,0.00038336896,0.0016918725,0.00029649143,0.000026077145,0.000013000009,0.00016233049,0.000608725,0.00018896723],"category_scores_gemma":[0.000028659771,0.00032654483,0.00089370477,0.00085300766,0.00007040861,0.000015160899,0.0001016738,0.00038644337,0.00026087492],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095841315,0.00087269704,0.0000063454454,0.17343804,0.0025510313,0.0003976105,0.00012866777,0.00001169655,0.033565857,0.0023384425,0.010913745,0.77568],"study_design_scores_gemma":[0.0011977754,0.0004696646,8.227331e-7,0.0280382,0.007206969,0.00006534562,0.000041706746,0.000055447625,0.0675994,0.00035608868,0.89426,0.0007085724],"about_ca_topic_score_codex":0.000010275333,"about_ca_topic_score_gemma":6.157534e-8,"teacher_disagreement_score":0.88334626,"about_ca_system_score_codex":0.000107510146,"about_ca_system_score_gemma":0.0003285458,"threshold_uncertainty_score":0.99991864},"labels":[],"label_agreement":null},{"id":"W4378978545","doi":"10.1016/j.molcel.2023.05.003","title":"When the +1 nucleosome gets in the way, TFIIH fails but does not fall","year":2023,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"Institute of Genetics; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Transcription factor II H; Translocase; Nucleosome; Transcription (linguistics); Cell biology; Genetics; Biophysics; Promoter; Gene; Histone; Gene expression; Chromosomal translocation","score_opus":0.012796546651827351,"score_gpt":0.22603116620290814,"score_spread":0.21323461955108078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378978545","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14787056,0.004685997,0.000898292,0.8307186,0.0010957835,0.0015490213,0.00041221725,0.00006343537,0.012706101],"genre_scores_gemma":[0.23647133,0.0016204104,0.00017530302,0.7207557,0.0027950183,0.00061762566,0.0013874096,0.00023532579,0.035941873],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977983,0.00029196814,0.00032884255,0.0006741788,0.00040082185,0.0005058637],"domain_scores_gemma":[0.99816096,0.000039844093,0.00015503736,0.0015410027,0.00006906443,0.00003408397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033184746,0.00036875028,0.00023655928,0.00007245303,0.00013726813,0.00019282856,0.0013177004,0.0006676448,0.000031556585],"category_scores_gemma":[0.000033299988,0.00020553706,0.00028268778,0.00010027618,0.0001457895,0.0000040166456,0.00022045843,0.00090165157,0.00018897768],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013441904,0.000037079186,0.000021231679,0.000072190436,0.000068324814,0.0003607976,0.00026171398,0.000031984353,0.26933667,0.000031205927,0.7287104,0.0010549237],"study_design_scores_gemma":[0.000237915,0.000052964202,0.000093617804,0.000016641816,0.000048815404,0.0000061882934,0.00015615913,0.000014959544,0.06416183,0.0003225847,0.9345533,0.00033499853],"about_ca_topic_score_codex":0.00035893792,"about_ca_topic_score_gemma":0.00018982198,"teacher_disagreement_score":0.2058429,"about_ca_system_score_codex":0.000027916378,"about_ca_system_score_gemma":0.00008501593,"threshold_uncertainty_score":0.83815575},"labels":[],"label_agreement":null},{"id":"W4383314189","doi":"10.1016/j.molcel.2023.06.005","title":"Go along to get along: Integrator at active replication forks defuses co-directional transcription-replication conflicts","year":2023,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Biology; Replication (statistics); Transcription (linguistics); Cell biology; Integrator; Genetics; Computational biology; Virology; Computer science; Telecommunications","score_opus":0.015830715556922063,"score_gpt":0.27118653986934593,"score_spread":0.2553558243124239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383314189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826576,0.00012285936,0.0121023925,0.000346702,0.00017080385,0.0007120639,0.00007199922,0.00019477519,0.003620811],"genre_scores_gemma":[0.9914293,0.00007441056,0.0011344539,0.0007801099,0.00009398239,0.00042496625,0.0022765088,0.00007116683,0.0037150749],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979783,0.00010640988,0.00029137664,0.0010058538,0.00027720295,0.00034082687],"domain_scores_gemma":[0.9984258,0.000019250285,0.000112510774,0.0010655728,0.0001911773,0.0001857051],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030103847,0.00024484322,0.00017008357,0.00012522397,0.00015957396,0.000036261856,0.0002570041,0.00025321834,0.000036455345],"category_scores_gemma":[0.00017182982,0.0002707883,0.00017659171,0.0003118337,0.0000420378,0.000009281581,0.00009498884,0.00012959773,0.000400804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011425283,0.000059938557,0.0003300409,0.000014873209,0.00004713673,0.000008030756,0.00016129774,0.0002124594,0.99305826,0.00016935742,0.0038964693,0.001927873],"study_design_scores_gemma":[0.00034898715,0.00019766195,0.0010461814,0.000008620254,0.00002166108,0.000011673548,0.00007274577,0.00019525428,0.8333647,0.000092113114,0.16439515,0.00024519768],"about_ca_topic_score_codex":0.000047672704,"about_ca_topic_score_gemma":0.00006580744,"teacher_disagreement_score":0.16049868,"about_ca_system_score_codex":0.000102549086,"about_ca_system_score_gemma":0.00006932137,"threshold_uncertainty_score":0.9999744},"labels":[],"label_agreement":null},{"id":"W4384925761","doi":"10.1016/j.molcel.2023.06.024","title":"A lncRNA from the FTO locus acts as a suppressor of the m6A writer complex and p53 tumor suppression signaling","year":2023,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Institute of Environmental Health Sciences; National Cancer Institute; National Institutes of Health","keywords":"Biology; RNA methylation; Messenger RNA; Downregulation and upregulation; RNA splicing; Cancer research; N6-Methyladenosine; Long non-coding RNA; Suppressor; Cell biology; Methylation; DNA methylation; Methyltransferase; RNA; Gene; Gene expression; Genetics","score_opus":0.01346604154700523,"score_gpt":0.2422080281680238,"score_spread":0.22874198662101858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384925761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959486,0.0011742476,0.00034403437,0.0007396739,0.00007601042,0.00022087143,0.0000774316,0.000009641951,0.0014094566],"genre_scores_gemma":[0.9984986,0.00007144687,0.000125826,0.00067252055,0.000062229425,0.000028779803,0.00009377397,0.000022713744,0.00042410576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910814,0.000109847206,0.00016041266,0.00027518623,0.00016595499,0.00018043714],"domain_scores_gemma":[0.99921006,0.00002573987,0.0000882473,0.0005761583,0.000052753036,0.000047024478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011146211,0.00012333918,0.00010771832,0.000016811218,0.00011806565,0.000036870795,0.0003253231,0.00006801577,0.0000723368],"category_scores_gemma":[0.000037622187,0.00007665399,0.00009607222,0.0001241674,0.000104851104,0.0000028263185,0.00024183647,0.000087352004,0.000014514813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029656505,0.00002147494,0.00030266528,0.00001162477,0.000022418899,0.0000055420337,0.00011026126,0.00015523148,0.9950822,0.000038557202,0.0038775948,0.00034278104],"study_design_scores_gemma":[0.00036277293,0.000041501942,0.002686301,0.000023932243,0.00003065491,0.0000028905847,0.00013116079,0.0002605889,0.9551634,0.00019656417,0.040993854,0.00010633265],"about_ca_topic_score_codex":0.000092134105,"about_ca_topic_score_gemma":0.0000061170144,"teacher_disagreement_score":0.039918747,"about_ca_system_score_codex":0.0000051076213,"about_ca_system_score_gemma":0.00004122078,"threshold_uncertainty_score":0.3125859},"labels":[],"label_agreement":null},{"id":"W4384938247","doi":"10.1016/j.molcel.2023.06.025","title":"Genome-scale mapping of DNA damage suppressors through phenotypic CRISPR-Cas9 screens","year":2023,"lang":"en","type":"article","venue":"Molecular Cell","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Human Genome Research Institute; Canadian Cancer Society","keywords":"Biology; DNA damage; Gene; DNA repair; Genetics; CRISPR; Phenotype; Genome; DNA replication; DNA","score_opus":0.010071863029891534,"score_gpt":0.2614268006744917,"score_spread":0.25135493764460015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384938247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9124742,0.001041393,0.07783018,0.00007927002,0.00012645098,0.0001956506,0.000037955648,0.000048425034,0.008166489],"genre_scores_gemma":[0.99446416,0.00015897998,0.0038310415,0.000105079926,0.00008993879,0.000015659754,0.0002485251,0.000058824033,0.0010278095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987324,0.000040230345,0.00025836725,0.00039494951,0.00018046914,0.00039360477],"domain_scores_gemma":[0.9992077,0.0000085979,0.00006252612,0.0005832078,0.000058401627,0.00007958226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012973431,0.00020572185,0.0002023796,0.00007864529,0.000053947653,0.000015872372,0.00028338702,0.00014895666,0.000045638142],"category_scores_gemma":[0.000022636756,0.00022731803,0.00016501099,0.00028688333,0.000062062834,0.0000035430178,0.00023142806,0.00010029164,0.000053782387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011651936,0.000030875002,0.00024712525,0.000093404684,0.000036340814,0.000022009923,0.00024186625,0.0051878206,0.99339086,0.00002536037,0.0005624503,0.00015022946],"study_design_scores_gemma":[0.00040518556,0.000085134736,0.0036983332,0.000013011191,0.000025802701,0.000002769896,0.00025640702,0.00038650073,0.9672086,0.00008300919,0.027580356,0.00025487866],"about_ca_topic_score_codex":0.000020159438,"about_ca_topic_score_gemma":0.0000076214383,"teacher_disagreement_score":0.08198995,"about_ca_system_score_codex":0.000007780352,"about_ca_system_score_gemma":0.000033136243,"threshold_uncertainty_score":0.926976},"labels":[],"label_agreement":null},{"id":"W4388735893","doi":"10.1016/j.molcel.2023.10.017","title":"Active growth signaling promotes senescence and cancer cell sensitivity to CDK7 inhibition","year":2023,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Hospital for Sick Children; SickKids Foundation; University of Toronto; Université de Montréal; McGill University","funders":"Cancer Research UK","keywords":"Biology; Cyclin-dependent kinase; Senescence; Cell growth; PI3K/AKT/mTOR pathway; Cell biology; Cyclin-dependent kinase 7; Growth inhibition; Cancer cell; Signal transduction; Cell cycle; Cancer research; Mechanistic target of rapamycin; Kinase; Cancer; Genetics; Protein kinase A; Cyclin-dependent kinase 2","score_opus":0.0072252625920891786,"score_gpt":0.22842140916203432,"score_spread":0.22119614656994516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388735893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924964,0.00026375367,0.005414921,0.00035462526,0.00007851072,0.000332804,0.000030426369,0.000042346717,0.0009862544],"genre_scores_gemma":[0.9981399,0.00013253246,0.0005067158,0.0005529407,0.00008634604,0.000046386376,0.0001047098,0.000026747293,0.00040368264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900395,0.00009233603,0.00011918199,0.0004055444,0.00014244906,0.00023656237],"domain_scores_gemma":[0.99955916,0.000008819046,0.000051105213,0.00016452087,0.00009716947,0.00011920608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015559798,0.00015277241,0.000105033294,0.00004853025,0.00008607655,0.000031547566,0.00004554829,0.00010735775,0.000011587174],"category_scores_gemma":[0.000044732395,0.00016045451,0.00005014121,0.0001932788,0.000035358466,0.000008462397,0.000131726,0.00007092052,0.000027367592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024954532,0.000026503358,0.00016440917,0.000038121827,0.0000070487263,0.000027970766,0.000087169254,0.00005537191,0.99722016,0.00001217622,0.0005877878,0.0017483133],"study_design_scores_gemma":[0.0002491766,0.00010194342,0.00027342915,0.000023603878,0.000010232057,0.0000029270082,0.00008268608,0.00013826905,0.9971543,0.00003976561,0.0017155017,0.00020818102],"about_ca_topic_score_codex":0.00013010077,"about_ca_topic_score_gemma":0.00003028613,"teacher_disagreement_score":0.0056435806,"about_ca_system_score_codex":0.000021729216,"about_ca_system_score_gemma":0.000045710458,"threshold_uncertainty_score":0.6543145},"labels":[],"label_agreement":null},{"id":"W4389455320","doi":"10.1016/j.molcel.2023.10.034","title":"Systematic analysis of alternative exon-dependent interactome remodeling reveals multitasking functions of gene regulatory factors","year":2023,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Canada Research Chairs; Canadian Institutes of Health Research; Government of Ontario","keywords":"Biology; Exon; Alternative splicing; Intron; Interactome; RNA splicing; Context (archaeology); RNA; Gene; Genetics; Computational biology; Cell biology","score_opus":0.017403727325380584,"score_gpt":0.2764549365302241,"score_spread":0.25905120920484354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389455320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97141576,0.00047209067,0.027454546,0.0000056114645,0.00007296224,0.00024401778,0.000048794413,0.000011978515,0.00027423768],"genre_scores_gemma":[0.9982441,0.00004778758,0.0003520156,0.000012363905,0.000015799491,0.000015415986,0.00021979383,0.000024160749,0.0010685779],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984102,0.00016405889,0.00049652945,0.0003195437,0.0003637509,0.00024586418],"domain_scores_gemma":[0.998842,0.000053634016,0.00026746895,0.0005476302,0.00020443753,0.00008485583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045849718,0.00014786072,0.00041229225,0.00047386973,0.000044877994,0.000012695065,0.00023873868,0.000089342124,0.00001180908],"category_scores_gemma":[0.0002180761,0.00013502753,0.0003446207,0.00061029615,0.000040384144,0.0000053401905,0.00013070485,0.00008791293,0.0000060948546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018770757,0.000035060988,0.0012319898,0.0006383585,0.0007935524,0.000010648637,0.00015310071,0.022497067,0.9745641,0.0000077252425,0.000019156829,0.000030465102],"study_design_scores_gemma":[0.0002247386,0.000086381675,0.001409144,0.0002509972,0.000367405,9.372065e-7,0.0006439389,0.022005854,0.9748626,0.000010512712,0.0000038389007,0.00013370038],"about_ca_topic_score_codex":0.00010584339,"about_ca_topic_score_gemma":0.000014748407,"teacher_disagreement_score":0.02710253,"about_ca_system_score_codex":0.000027243272,"about_ca_system_score_gemma":0.000032375818,"threshold_uncertainty_score":0.5506263},"labels":[],"label_agreement":null},{"id":"W4390577326","doi":"10.1016/j.molcel.2023.12.009","title":"Lysosome identity crisis: Phosphoinositides and mTORC1 negotiate lysosomal behavior","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Calcium signaling and nucleotide metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Metropolitan University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Toronto Metropolitan University","keywords":"mTORC1; Phosphatidylinositol; Lysosome; Cell biology; Biology; Anabolism; Organelle; Catabolism; Kinase; Biochemistry; Signal transduction; Metabolism; PI3K/AKT/mTOR pathway; Enzyme","score_opus":0.0059853177791008615,"score_gpt":0.24198877433734284,"score_spread":0.23600345655824198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390577326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96661377,0.028867112,0.003005581,0.00011645324,0.00042062704,0.0001610478,0.000028473693,0.00007287274,0.00071404217],"genre_scores_gemma":[0.9976503,0.00044756883,0.0004279144,0.00047507836,0.00022159725,0.00003275219,0.00006551391,0.00006299968,0.00061625923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985539,0.00007198806,0.0002283077,0.0006048967,0.00021320059,0.00032775223],"domain_scores_gemma":[0.999383,0.000007791288,0.000036878308,0.00036458118,0.000048610375,0.00015915792],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018417051,0.00024728003,0.00019243768,0.00008373205,0.00008946364,0.0002290829,0.00018620424,0.00016599943,0.000053504562],"category_scores_gemma":[0.000016696154,0.0002497368,0.00019996164,0.0001312882,0.00007321797,0.000015588199,0.00018938337,0.00015562991,0.00007888988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002644729,0.000054161457,0.00042205967,0.00006725515,0.000047321268,0.00022510432,0.00005435138,0.00001722143,0.9958975,0.0005362821,0.0019063572,0.00074594584],"study_design_scores_gemma":[0.0005371487,0.00011397771,0.0009664442,0.000024813055,0.00022377097,0.00005785002,0.00006005827,0.00007352904,0.9734337,0.00039817407,0.023734989,0.00037556308],"about_ca_topic_score_codex":0.000099695084,"about_ca_topic_score_gemma":0.000007265871,"teacher_disagreement_score":0.031036528,"about_ca_system_score_codex":0.000011600921,"about_ca_system_score_gemma":0.00004659816,"threshold_uncertainty_score":0.99999547},"labels":[],"label_agreement":null},{"id":"W4390739386","doi":"10.1016/j.molcel.2023.12.019","title":"Poly(ADP-ribosyl)ation enhances nucleosome dynamics and organizes DNA damage repair components within biomolecular condensates","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Guelph; Hospital for Sick Children; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Nucleosome; Biology; Histone; Chromatin; DNA repair; Cell biology; DNA; DNA damage; XRCC1; Biophysics; Biochemistry; Gene","score_opus":0.004687589669117774,"score_gpt":0.21355200572769756,"score_spread":0.20886441605857978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390739386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98001075,0.006346985,0.0114689395,0.00017512687,0.00041538724,0.00031095435,0.000053471656,0.00024351246,0.0009748617],"genre_scores_gemma":[0.99340314,0.0000962384,0.0042490894,0.0003429404,0.00007323835,0.000019278505,0.00051475863,0.00011381745,0.0011874838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980072,0.00013662936,0.00034293326,0.00085100933,0.0002910086,0.00037122212],"domain_scores_gemma":[0.99907774,0.000015446156,0.00009384846,0.0005677811,0.00008553542,0.00015966926],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025830083,0.00035920486,0.00024591584,0.00012919448,0.00011073287,0.0001593927,0.00024597227,0.00027290056,0.00003630107],"category_scores_gemma":[0.000051883413,0.00036770687,0.00016782837,0.00023931166,0.0001429943,0.000016202235,0.00027242576,0.000163265,0.00006603715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002788669,0.00006270762,0.0001129632,0.0001490399,0.00012292297,0.00021840373,0.000111348265,0.000007486365,0.997198,0.0014896804,0.00017123403,0.00032836167],"study_design_scores_gemma":[0.0003744241,0.00027033963,0.00010878114,0.000057794798,0.00008651127,0.000041663545,0.00013052681,0.00961363,0.9864097,0.00055924704,0.0019129101,0.00043444496],"about_ca_topic_score_codex":0.000029562327,"about_ca_topic_score_gemma":0.000024338431,"teacher_disagreement_score":0.0133923935,"about_ca_system_score_codex":0.000044150023,"about_ca_system_score_gemma":0.000074435855,"threshold_uncertainty_score":0.9998775},"labels":[],"label_agreement":null},{"id":"W4390972802","doi":"10.1016/j.molcel.2023.12.027","title":"Actions speak louder than ORFs: A non-canonical microprotein promotes medulloblastoma oncogenesis","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; ORFS; Medulloblastoma; Carcinogenesis; Genetics; Cancer; Gene; Open reading frame","score_opus":0.009106121836267507,"score_gpt":0.25393412015415456,"score_spread":0.24482799831788707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390972802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9565542,0.0051615355,0.02662823,0.00085737626,0.00027424085,0.00041194295,0.00003891863,0.000053065196,0.010020539],"genre_scores_gemma":[0.99193704,0.00016550167,0.0017940255,0.0002489155,0.00023077258,0.00014765655,0.000090882735,0.000066865236,0.005318359],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867815,0.000051118157,0.00020955331,0.00057963206,0.00017022673,0.00031132568],"domain_scores_gemma":[0.99916965,0.00000600145,0.000039268885,0.00055487314,0.00006991942,0.00016029186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001086279,0.00021822476,0.00013960988,0.00007043875,0.00009555792,0.00010466815,0.00024301287,0.00019076513,0.00012080652],"category_scores_gemma":[0.000020620606,0.00020477583,0.000218152,0.00022147936,0.00008372234,0.000005247091,0.000100068864,0.00013935684,0.00021581844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019683823,0.0000981239,0.00005908269,0.000052592975,0.00007676683,0.000043720032,0.000036569767,0.00004311686,0.9918723,0.00006911257,0.0033341153,0.004294787],"study_design_scores_gemma":[0.00017214639,0.0001406859,0.0001515731,0.00002750813,0.000046332374,0.000024111381,0.000035882673,0.0001761461,0.7762638,0.0000270815,0.22271283,0.000221897],"about_ca_topic_score_codex":0.00006409272,"about_ca_topic_score_gemma":0.000047049798,"teacher_disagreement_score":0.21937872,"about_ca_system_score_codex":0.000041758263,"about_ca_system_score_gemma":0.0003531815,"threshold_uncertainty_score":0.8350516},"labels":[],"label_agreement":null},{"id":"W4391825116","doi":"10.1016/j.molcel.2024.01.018","title":"Specialized replication mechanisms maintain genome stability at human centromeres","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Centre National de la Recherche Scientifique; Medical Research Council; Institut National Du Cancer; Agence Nationale de la Recherche; Infrastructures en Biologie Santé et Agronomie","keywords":"Biology; Centromere; Replication (statistics); Genome; Human genome; Computational biology; DNA replication; Genetics; Evolutionary biology; DNA; Gene; Chromosome; Virology","score_opus":0.01588213110242459,"score_gpt":0.22089213334027819,"score_spread":0.2050100022378536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391825116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915651,0.00035827293,0.0004643692,0.0012592705,0.00009035312,0.00025928085,0.00007143211,0.00011414183,0.0058177966],"genre_scores_gemma":[0.9984094,0.00001131508,0.00032004385,0.00012299925,0.000110757945,0.000022023196,0.00030027126,0.0000014996064,0.0007017274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900174,0.000071463925,0.00015996721,0.0004177766,0.00015831136,0.00019076907],"domain_scores_gemma":[0.9997084,0.00002870705,0.000028718296,0.0001338667,0.000024603634,0.00007571046],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001581058,0.000100992,0.00009255024,0.000008153099,0.00017719461,0.000077457495,0.0001479289,0.000059665435,0.0041183247],"category_scores_gemma":[0.000010710874,0.000044760203,0.000107414424,0.00020044454,0.000023167693,0.000025642883,0.000093017414,0.000057769004,0.00022976563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000031832558,0.000040453437,0.000048363665,0.000007936237,0.0000060904317,0.000011562596,0.00004095988,0.0000028098225,0.9825588,0.015624099,0.000037137343,0.001618619],"study_design_scores_gemma":[0.00015119358,0.00019247615,0.019743133,0.000009440051,0.000037348105,0.0000063126918,0.00008405402,0.00016694189,0.777473,0.06712831,0.13471027,0.00029754185],"about_ca_topic_score_codex":0.00007632966,"about_ca_topic_score_gemma":0.0001941298,"teacher_disagreement_score":0.2050858,"about_ca_system_score_codex":0.00007924631,"about_ca_system_score_gemma":0.0000063155044,"threshold_uncertainty_score":0.996792},"labels":[],"label_agreement":null},{"id":"W4392246539","doi":"10.1016/j.molcel.2024.02.001","title":"The proteomic landscape of genotoxic stress-induced micronuclei","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; Terry Fox Research Institute; Leukemia and Lymphoma Society of Canada; University of Toronto; J.P. Bickell Foundation; Natural Sciences and Engineering Research Council of Canada; Princess Margaret Cancer Foundation","keywords":"Biology; Spliceosome; DNA damage; Micronucleus test; Proteome; Cell biology; Nucleoplasm; Cytoplasm; Genetics; Replisome; DNA repair; RNA splicing; Nuclear protein; DNA; Computational biology; Transcription factor; Gene; Nucleolus; Eukaryotic DNA replication","score_opus":0.00459610922184061,"score_gpt":0.21233553264185534,"score_spread":0.20773942342001472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392246539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899952,0.0042773453,0.0011601415,0.00009033596,0.00021163515,0.00034130848,0.000018702034,0.000030369587,0.0038749706],"genre_scores_gemma":[0.9979538,0.00009271865,0.00060114905,0.000059264108,0.00006785957,0.000037440455,0.000033999513,0.00004636542,0.0011074063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990658,0.00006094679,0.00017979744,0.00031746313,0.00014090545,0.0002350561],"domain_scores_gemma":[0.9993618,0.000008237164,0.00004507149,0.00049670774,0.000037355745,0.000050791336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016062803,0.00014389676,0.00010039367,0.000032683896,0.00005568484,0.00004949794,0.000289124,0.00012369949,0.000019842855],"category_scores_gemma":[0.000017905384,0.00010966186,0.00014785929,0.00009328303,0.00003811342,0.0000018585163,0.00013754066,0.00010085392,0.00004297121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018725364,0.000025487865,0.000029621015,0.00006258041,0.00004650586,0.000025225341,0.000028331802,0.000018138291,0.997421,0.00019668498,0.00050408905,0.0016235738],"study_design_scores_gemma":[0.00015859862,0.00017814296,0.000028280314,0.000020446201,0.000023231263,0.0000071342506,0.0000326185,0.00021360427,0.9847757,0.00013872595,0.014294035,0.00012947527],"about_ca_topic_score_codex":0.0000064839737,"about_ca_topic_score_gemma":0.0000046651867,"teacher_disagreement_score":0.013789946,"about_ca_system_score_codex":0.0000088112165,"about_ca_system_score_gemma":0.000086018204,"threshold_uncertainty_score":0.44718808},"labels":[],"label_agreement":null},{"id":"W4392910874","doi":"10.1016/j.molcel.2024.02.028","title":"A kinetic dichotomy between mitochondrial and nuclear gene expression processes","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institutes of Health; European Molecular Biology Organization","keywords":"Biology; Mitochondrial DNA; Mitochondrial biogenesis; Mitochondrion; Gene expression; Cell biology; Messenger RNA; Mitochondrial ribosome; Nuclear gene; Translation (biology); Oxidative phosphorylation; MT-RNR1; Regulation of gene expression; Gene; Ribosome; Molecular biology; Genetics; RNA; Biochemistry","score_opus":0.007175456906563248,"score_gpt":0.22362640874041195,"score_spread":0.21645095183384871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392910874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9622771,0.006750173,0.022952165,0.00015656708,0.0008265916,0.0003671843,0.00003519824,0.000086751876,0.006548265],"genre_scores_gemma":[0.9905995,0.00027906275,0.0061871605,0.00033490238,0.00087971584,0.000032418582,0.00017442556,0.00006650283,0.0014462712],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988987,0.00007073972,0.000166592,0.00052716304,0.00012038162,0.00021644041],"domain_scores_gemma":[0.99952996,0.000014565807,0.000029774179,0.00026245654,0.00004297304,0.000120286575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005089071,0.00017996665,0.00014125791,0.00006440701,0.000063591826,0.00007815526,0.000121797595,0.00021194764,0.00008480094],"category_scores_gemma":[0.00005171357,0.00016483746,0.00006914588,0.00012091552,0.00006493601,0.0000044993735,0.00011721849,0.00012562005,0.00007111252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042497217,0.000017611814,0.000106715954,0.00009986079,0.000016814807,0.00005904316,0.00007432321,0.000005151012,0.99527746,0.00003260434,0.0035613615,0.0007065322],"study_design_scores_gemma":[0.00032595682,0.00019440927,0.000030373776,0.0000252176,0.000033253444,0.000023339124,0.000013211721,0.000013395071,0.6826863,0.00006385817,0.31642175,0.0001689002],"about_ca_topic_score_codex":0.0000050376243,"about_ca_topic_score_gemma":0.0000014471907,"teacher_disagreement_score":0.31286037,"about_ca_system_score_codex":0.0000056015438,"about_ca_system_score_gemma":0.000056960893,"threshold_uncertainty_score":0.6721876},"labels":[],"label_agreement":null},{"id":"W4392975702","doi":"10.1016/j.molcel.2024.02.033","title":"ERMA (TMEM94) is a P-type ATPase transporter for Mg2+ uptake in the endoplasmic reticulum","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Magnesium in Health and Disease","field":"Nursing","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Congressionally Directed Medical Research Programs; National Institute of General Medical Sciences; Canadian Institutes of Health Research; University of Texas Health Science Center at San Antonio; National Institute on Aging; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; U.S. Department of Defense","keywords":"Endoplasmic reticulum; Biology; Intracellular; Transporter; ATPase; Cell biology; Type (biology); Biochemistry; Gene; Enzyme; Ecology","score_opus":0.012464633390116605,"score_gpt":0.27195577745735633,"score_spread":0.2594911440672397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392975702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97368747,0.0046163485,0.0004366374,0.008041857,0.0013297196,0.0012353642,0.00008779382,0.00010372768,0.010461101],"genre_scores_gemma":[0.9891351,0.000007009151,0.00046925538,0.009742995,0.00009408988,0.00012886363,0.000063681764,0.000044108838,0.00031491698],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985787,0.00007845692,0.00029787348,0.0003769813,0.0002237626,0.0004442183],"domain_scores_gemma":[0.9993247,0.00008459191,0.000028357603,0.00039197135,0.000033279386,0.00013713932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002500009,0.00017985082,0.0001463622,0.00007944872,0.00008690571,0.00010075349,0.00020030333,0.00009822562,0.00026826514],"category_scores_gemma":[0.000029642828,0.00014208216,0.00016981276,0.00030183748,0.000044131895,0.000052759166,0.000008048013,0.00019326352,0.00013772825],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013093076,0.0048002442,0.009290041,0.059078604,0.00014044871,0.02290963,0.07871176,0.0010489536,0.3026302,0.010469455,0.39117733,0.106650256],"study_design_scores_gemma":[0.0028722265,0.0008513222,0.0017872339,0.00013080501,0.0004448201,0.00004502953,0.0003710133,0.0226934,0.09185699,0.003909169,0.8743231,0.00071488076],"about_ca_topic_score_codex":0.000075495045,"about_ca_topic_score_gemma":0.000021779038,"teacher_disagreement_score":0.48314577,"about_ca_system_score_codex":0.000030590683,"about_ca_system_score_gemma":0.000093422364,"threshold_uncertainty_score":0.5793942},"labels":[],"label_agreement":null},{"id":"W4393950548","doi":"10.1016/j.molcel.2024.02.024","title":"Intrinsic disorder: A term to define the specific physicochemical characteristic of protein conformational heterogeneity","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Skaggs Institute for Chemical Biology, Scripps Research Institute; European Research Council; National Institutes of Health; H2020 European Research Council; Canada Research Chairs; Canadian Institutes of Health Research; American Lebanese Syrian Associated Charities; Deutsche Forschungsgemeinschaft; St. Jude Children's Research Hospital","keywords":"Biology; Term (time); Intrinsically disordered proteins; Computational biology; Biochemistry","score_opus":0.004215104578426121,"score_gpt":0.21359254123086568,"score_spread":0.20937743665243957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393950548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9734829,0.0016676971,0.023543512,0.00022212349,0.000077115204,0.00040875407,0.00006293444,0.000013826585,0.00052111974],"genre_scores_gemma":[0.99862903,0.00002654025,0.0006312502,0.00020250314,0.000118453005,0.00005842815,0.00024132952,0.000020155763,0.00007233481],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992092,0.00002861441,0.00019845812,0.00024336208,0.00015071077,0.00016963723],"domain_scores_gemma":[0.99949956,0.0000057660627,0.0000425053,0.00034587117,0.00005226322,0.00005405304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006384982,0.00014613968,0.00011944363,0.000032032836,0.00003534151,0.000036899393,0.00021208842,0.00008019764,0.000013386234],"category_scores_gemma":[0.000015840964,0.00011070476,0.00011793552,0.00011094626,0.00006759473,0.0000033614178,0.00014277683,0.00010292555,0.00002637378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038789156,0.00002838278,0.000059212194,0.00008034936,0.000026347652,0.0000066659622,0.000034793087,0.000030315945,0.99300003,0.00094295375,0.00011771069,0.0056344736],"study_design_scores_gemma":[0.00016235864,0.00011895864,0.000643421,0.000025413468,0.000013824987,0.00001090662,0.000006624035,0.00011625257,0.9693917,0.00027260976,0.029086351,0.00015156402],"about_ca_topic_score_codex":0.0000043996156,"about_ca_topic_score_gemma":0.0000022686734,"teacher_disagreement_score":0.028968642,"about_ca_system_score_codex":0.000010817174,"about_ca_system_score_gemma":0.000040450675,"threshold_uncertainty_score":0.4514409},"labels":[],"label_agreement":null},{"id":"W4394748831","doi":"10.1016/j.molcel.2024.03.023","title":"Structure of the interleukin-5 receptor complex exemplifies the organizing principle of common beta cytokine signaling","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Receptor; Cell biology; Signal transduction; Cytokine; Cytokine receptor; Cell surface receptor; Interleukin-6 receptor; Common gamma chain; Inflammation; Cell signaling; Immune system; Interleukin 10; Interleukin; Immunology; Genetics","score_opus":0.01045512913602446,"score_gpt":0.2358437077220349,"score_spread":0.22538857858601044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394748831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.983127,0.015205974,0.00024391511,0.00028785886,0.00052818574,0.00022154266,0.000071691065,0.000029434894,0.00028442126],"genre_scores_gemma":[0.9988617,0.000049138816,0.00006527159,0.0001366236,0.0000111612635,0.000002447856,0.00004200413,0.000028552286,0.0008031358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988576,0.00038257748,0.00034477175,0.00016688276,0.00005524954,0.0001928836],"domain_scores_gemma":[0.99912864,0.00018266757,0.00013309545,0.00048436146,0.00006578582,0.0000054319553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017057719,0.00015943327,0.0002533105,0.000058176396,0.00013961262,0.000018937602,0.0005250789,0.00012992322,0.0008212485],"category_scores_gemma":[0.000027799197,0.00009061741,0.0001599091,0.00028737437,0.00032267405,0.000030714316,0.0001949566,0.00033706753,0.0000220932],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010600136,0.000034931803,0.00012946823,0.0000896864,0.00019753823,0.0000016674122,0.0012955919,0.000038476497,0.99588144,0.0011584059,0.00038127552,0.000685504],"study_design_scores_gemma":[0.0002527041,0.000084889325,0.000424664,0.00011273326,0.000049749033,0.00001575874,0.00024770372,0.0000058314404,0.9091972,0.000081427555,0.08943732,0.000090025824],"about_ca_topic_score_codex":0.00006901854,"about_ca_topic_score_gemma":0.000005833819,"teacher_disagreement_score":0.08905605,"about_ca_system_score_codex":0.000021204938,"about_ca_system_score_gemma":0.00006584493,"threshold_uncertainty_score":0.89920956},"labels":[],"label_agreement":null},{"id":"W4394935715","doi":"10.1016/j.molcel.2024.03.009","title":"Human DNA polymerase θ does not harbor intrinsic nuclease activity","year":2024,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Telesta Therapeutics (Canada)","funders":"National Cancer Institute","keywords":"Biology; DNA polymerase; Polymerase; Nuclease; DNA polymerase II; Molecular biology; DNA clamp; Biochemistry; DNA; Genetics; RNA; Reverse transcriptase; Gene","score_opus":0.0062366970461364595,"score_gpt":0.2189199410819561,"score_spread":0.21268324403581962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394935715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8462879,0.0023105629,0.0006368005,0.13571824,0.0026609674,0.0012974228,0.00078203174,0.00039064878,0.009915391],"genre_scores_gemma":[0.5712717,0.000041956915,0.00037270944,0.3932837,0.003362703,0.00012285558,0.0008662045,0.00050307513,0.030175101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99676627,0.0002176702,0.00033884752,0.0014660662,0.0004854099,0.0007257285],"domain_scores_gemma":[0.9979559,0.0000089496525,0.00018891194,0.0016035071,0.000071461145,0.00017122208],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00015313242,0.000750848,0.0004772889,0.00018452299,0.00011350674,0.00016971232,0.0006610521,0.0014640078,0.00020413489],"category_scores_gemma":[0.00002963446,0.0006772406,0.0006232043,0.00012947105,0.00012278545,0.0000049581236,0.0006126798,0.0013423214,0.0004110797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019953115,0.0000593825,9.158157e-7,0.00026138968,0.00012782875,0.002285867,0.000007634396,6.79328e-7,0.7166043,0.000021927082,0.28017765,0.00043249046],"study_design_scores_gemma":[0.00022784906,0.00013743904,0.0000020116318,0.000030170879,0.00014149924,0.000008757565,0.0000020055882,0.0000053623116,0.5769303,0.00006425381,0.4219401,0.0005102676],"about_ca_topic_score_codex":0.000058676393,"about_ca_topic_score_gemma":0.0000078965695,"teacher_disagreement_score":0.27501622,"about_ca_system_score_codex":0.00006668238,"about_ca_system_score_gemma":0.00016239751,"threshold_uncertainty_score":0.9998323},"labels":[],"label_agreement":null},{"id":"W4396577866","doi":"10.1016/j.molcel.2024.03.028","title":"Polyphosphate attachment to lysine repeats is a non-covalent protein modification","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Coagulation, Bradykinin, Polyphosphates, and Angioedema","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lysine; Phosphoramidate; Covalent bond; Biology; Polyphosphate; Protonation; Biochemistry; Serine; Phosphate; Amino acid; Phosphorylation; Chemistry; Organic chemistry","score_opus":0.014835752284018672,"score_gpt":0.292566084837204,"score_spread":0.2777303325531853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396577866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9352751,0.009968527,0.033283427,0.010497809,0.0004033232,0.002256567,0.00002350911,0.00034128362,0.007950503],"genre_scores_gemma":[0.9742659,0.000044096352,0.002648588,0.0019459698,0.00015357677,0.00016545516,0.000087186774,0.00007030527,0.020618977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980789,0.000026489144,0.00039326944,0.00064290117,0.0004827709,0.00037569532],"domain_scores_gemma":[0.9989226,0.000012137174,0.00005706689,0.0006307791,0.00009855263,0.0002788673],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020015288,0.00026573232,0.00028932554,0.00020660204,0.00007437131,0.00008858563,0.00011797886,0.000104363215,0.00029321975],"category_scores_gemma":[0.000017493743,0.00024776455,0.00023916188,0.00050699804,0.000029042867,0.00007360775,0.00006413105,0.00013684067,0.00082693633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019903816,0.00043338898,0.0011288181,0.0007993285,0.00018490168,0.00070337125,0.002194409,0.00019127915,0.9461392,0.0010584953,0.010200288,0.03676748],"study_design_scores_gemma":[0.00078707,0.00033972945,0.003744605,0.00047562394,0.00019743695,0.000022750459,0.000042296902,0.0074344757,0.917184,0.00022867517,0.06920557,0.00033778118],"about_ca_topic_score_codex":0.00014879419,"about_ca_topic_score_gemma":0.0000019466847,"teacher_disagreement_score":0.05900528,"about_ca_system_score_codex":0.00014948264,"about_ca_system_score_gemma":0.00013412813,"threshold_uncertainty_score":0.99999744},"labels":[],"label_agreement":null},{"id":"W4399287151","doi":"10.1016/j.molcel.2024.05.012","title":"Assembly of the Tn7 targeting complex by a regulated stepwise process","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Metal complexes synthesis and properties","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Process (computing); Cell biology; Computational biology","score_opus":0.02040785873891537,"score_gpt":0.25551119140042644,"score_spread":0.23510333266151107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399287151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9695914,0.008726568,0.00043039836,0.00083579356,0.00009624359,0.00032571843,0.000010413926,0.0000620083,0.019921482],"genre_scores_gemma":[0.9964645,0.00001186322,0.00032940393,0.00027275158,0.0000215624,0.000009513586,0.000016551367,0.000032210784,0.0028416475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990002,0.000088060086,0.00023969807,0.00020609851,0.0002995583,0.00016642245],"domain_scores_gemma":[0.9995313,0.000026689573,0.000051700823,0.00026851468,0.00007174692,0.000050002356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019547794,0.00012393353,0.00022114695,0.000036246813,0.0000456346,0.000028394697,0.00014032208,0.000049640326,0.00017222011],"category_scores_gemma":[0.000052783944,0.00007345048,0.00014787543,0.00023690607,0.0000605052,0.000026464397,0.000052065425,0.00013272474,0.000025125566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027082817,0.000048853824,0.000057104266,0.00068119465,0.000041645908,0.000015692494,0.00021229924,0.000013443222,0.9921418,0.00007566149,0.005540827,0.0011444289],"study_design_scores_gemma":[0.00017154941,0.00007334699,0.00011458998,0.00022349587,0.00010279476,0.000008182033,0.00008079824,0.0048776837,0.95363694,0.00009150466,0.04052518,0.00009391489],"about_ca_topic_score_codex":0.000021214817,"about_ca_topic_score_gemma":4.3707217e-7,"teacher_disagreement_score":0.038504805,"about_ca_system_score_codex":0.000014915558,"about_ca_system_score_gemma":0.000057720445,"threshold_uncertainty_score":0.29952237},"labels":[],"label_agreement":null},{"id":"W4399566917","doi":"10.1016/j.molcel.2024.05.019","title":"Molecular insights into the activation of Mre11-Rad50 endonuclease activity by Sae2/CtIP","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Dystonia Medical Research Foundation Canada; Commissariat à l'Énergie Atomique et aux Énergies Alternatives; Fondation pour la Recherche Médicale; Grand Équipement National De Calcul Intensif; University of Sussex; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; H2020 European Research Council; Agence Nationale de la Recherche; European Research Council; National Science Foundation","keywords":"Rad50; Nuclease; Biology; Endonuclease; Saccharomyces cerevisiae; DNA; Cell biology; Genetics; DNA-binding protein; Gene","score_opus":0.0038624118952730793,"score_gpt":0.20806155951189348,"score_spread":0.2041991476166204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399566917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9606633,0.0035426437,0.031268958,0.00032741128,0.00018962243,0.0003468962,0.000008886178,0.0000521073,0.0036001264],"genre_scores_gemma":[0.9983212,0.00011045284,0.0004797313,0.00041563268,0.00005269254,0.000043104883,0.00008446534,0.0000738059,0.00041891015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998423,0.00018936126,0.00021980211,0.0005690806,0.0003353888,0.0002633797],"domain_scores_gemma":[0.99896514,0.000024351959,0.00009087158,0.0007485536,0.00007399522,0.00009708043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000169091,0.0002658582,0.0001807474,0.00007128185,0.000076605014,0.000055966935,0.00035345857,0.000209277,0.00002569396],"category_scores_gemma":[0.000058259146,0.00021925538,0.00023467638,0.00024561948,0.000100516874,0.000012050659,0.00020698053,0.00020416435,0.000026323994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048472466,0.00010499988,0.0000064514734,0.000083046994,0.00008619803,0.000039088645,0.00018306477,0.00012701342,0.9927219,0.0006042881,0.0017556503,0.004239807],"study_design_scores_gemma":[0.00024840343,0.00018046907,0.000011073618,0.000024849069,0.000050192048,0.0000051499665,0.000046051653,0.00082390616,0.94503975,0.00059769285,0.05274389,0.00022857761],"about_ca_topic_score_codex":0.00008827734,"about_ca_topic_score_gemma":0.0000053865583,"teacher_disagreement_score":0.050988242,"about_ca_system_score_codex":0.00003816836,"about_ca_system_score_gemma":0.00010938294,"threshold_uncertainty_score":0.8940975},"labels":[],"label_agreement":null},{"id":"W4399577241","doi":"10.1016/j.molcel.2024.05.018","title":"K29-linked free polyubiquitin chains affect ribosome biogenesis and direct ribosomal proteins to the intranuclear quality control compartment","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer; University of Toronto","funders":"National Human Genome Research Institute; Canadian Institutes of Health Research; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Proteostasis; Ribosome biogenesis; Biology; Ribosome; Ribosomal protein; Cell biology; Ribosomal RNA; Compartment (ship); Translation (biology); Biochemistry; RNA; Messenger RNA; Gene","score_opus":0.012197003322845946,"score_gpt":0.2522424467653273,"score_spread":0.24004544344248135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399577241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9694597,0.008883004,0.010997459,0.004239822,0.00024749473,0.001990929,0.0006525472,0.00011803109,0.0034109778],"genre_scores_gemma":[0.9963568,0.0001024187,0.00083391555,0.0015366413,0.00030348616,0.000274329,0.00010628563,0.00007159284,0.00041456657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976944,0.00046291217,0.00031748557,0.00073477917,0.00028595567,0.00050449756],"domain_scores_gemma":[0.9987943,0.000051061175,0.000060485818,0.0008011215,0.00005377388,0.00023924059],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00066535996,0.0003505157,0.00030959144,0.0000781783,0.00018900493,0.00016623744,0.0004223076,0.00018603438,0.000048843613],"category_scores_gemma":[0.000090566195,0.0002732857,0.0002247332,0.00017537456,0.00012460448,0.0000053107206,0.0002808328,0.00017906951,0.00009530432],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014928692,0.00008773279,0.00010982438,0.0001421285,0.00013155432,0.000048057747,0.00017300001,0.000038431463,0.99385387,0.0009722613,0.001581066,0.0027127604],"study_design_scores_gemma":[0.0009308739,0.000650346,0.00067925843,0.000049633974,0.000079252786,0.000012593711,0.000044087355,0.00028225532,0.8731195,0.00014224458,0.1235779,0.00043205483],"about_ca_topic_score_codex":0.000097477765,"about_ca_topic_score_gemma":0.000057071447,"teacher_disagreement_score":0.121996835,"about_ca_system_score_codex":0.000028875746,"about_ca_system_score_gemma":0.00008264693,"threshold_uncertainty_score":0.9999719},"labels":[],"label_agreement":null},{"id":"W4399970126","doi":"10.1016/j.molcel.2024.05.028","title":"Efficient, specific, and combinatorial control of endogenous exon splicing with dCasRx-RBM25","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Simons Foundation","keywords":"Exon; Biology; RNA splicing; Minigene; Exon skipping; Alternative splicing; Computational biology; Exonic splicing enhancer; CRISPR; Genetics; Cell biology; RNA; Gene","score_opus":0.0076723170728470414,"score_gpt":0.21476059787220234,"score_spread":0.2070882807993553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399970126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97044516,0.007822577,0.01751498,0.000039316867,0.00012299945,0.00026917685,0.0000137124825,0.000014816679,0.0037572805],"genre_scores_gemma":[0.9992331,0.00010999271,0.0002488284,0.00003790609,0.000094803014,0.000010696878,0.00001630437,0.00003363874,0.00021472797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989221,0.000056404184,0.00016011974,0.0003601412,0.00021328739,0.00028796232],"domain_scores_gemma":[0.9995079,0.000019653866,0.000034444005,0.0002711625,0.000059362555,0.000107476575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019009427,0.00014980986,0.00017264704,0.00006743399,0.00005002037,0.000046933623,0.00011690451,0.00008649311,0.000009545555],"category_scores_gemma":[0.000013281902,0.00012567203,0.000067880865,0.000112128924,0.00009355808,0.0000015151518,0.00006356368,0.00013003754,0.0000066441276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016651461,0.000052911248,0.0001714646,0.00010104494,0.000051200426,0.00020344842,0.000037237107,0.0004185251,0.99710184,0.00067468267,0.00006807917,0.0009530342],"study_design_scores_gemma":[0.001393826,0.0006673593,0.00004026237,0.00004498284,0.00002762423,0.000051892588,0.00004627356,0.0019242212,0.9897517,0.000032878008,0.0058502248,0.00016875543],"about_ca_topic_score_codex":0.00003695355,"about_ca_topic_score_gemma":0.0000023305386,"teacher_disagreement_score":0.028787961,"about_ca_system_score_codex":0.000011710129,"about_ca_system_score_gemma":0.000070229646,"threshold_uncertainty_score":0.5124756},"labels":[],"label_agreement":null},{"id":"W4400040614","doi":"10.1016/j.molcel.2024.06.003","title":"A cell-free transcription-translation pipeline for recreating methylation patterns boosts DNA transformation in bacteria","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Division of Chemical, Bioengineering, Environmental, and Transport Systems; Novo Nordisk Fonden; Deutsche Forschungsgemeinschaft; Novo Nordisk; Camille and Henry Dreyfus Foundation; National Science Foundation","keywords":"Biology; Methyltransferase; DNA methylation; DNA; Genetics; Transformation (genetics); Methylation; Computational biology; Gene; Gene expression","score_opus":0.010741117364658416,"score_gpt":0.23638754414190452,"score_spread":0.2256464267772461,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400040614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73050976,0.0014409876,0.26577982,0.0006113895,0.00029090766,0.0005648585,0.00012067269,0.0000372166,0.00064437377],"genre_scores_gemma":[0.99258965,0.00025754326,0.004926096,0.00008203808,0.00012728103,0.000086131484,0.0017475421,0.000043539483,0.00014017223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988208,0.000062439714,0.00036328108,0.0004006238,0.00009882677,0.00025404347],"domain_scores_gemma":[0.9995579,0.000012331341,0.000048672136,0.00029071383,0.000046899433,0.000043448155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025154534,0.00019163615,0.00014639064,0.00013843138,0.000041348092,0.00006901603,0.00016645595,0.0003567633,0.00001927786],"category_scores_gemma":[0.000014733158,0.00020015979,0.00013678099,0.0001456894,0.000020602769,0.0000116533065,0.000019531644,0.0001063684,0.000004564318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007230239,0.000043585806,0.000017035249,0.0002074859,0.000010351705,0.000008322463,0.0001664522,0.00009511247,0.9824226,0.00005720343,0.00009189021,0.016807683],"study_design_scores_gemma":[0.0009744309,0.00018150866,0.00007776263,0.000044467928,0.00003752409,0.0000073494616,0.00004145711,0.0041291756,0.9642068,0.00028627118,0.029783655,0.00022958648],"about_ca_topic_score_codex":0.000025563342,"about_ca_topic_score_gemma":0.00008271902,"teacher_disagreement_score":0.2620799,"about_ca_system_score_codex":0.000022289889,"about_ca_system_score_gemma":0.000045294248,"threshold_uncertainty_score":0.8162279},"labels":[],"label_agreement":null},{"id":"W4400281042","doi":"10.1016/j.molcel.2024.06.008","title":"Genome-wide quantification of RNA flow across subcellular compartments reveals determinants of the mammalian transcript life cycle","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Human Genome Research Institute; University of California, San Francisco; Jane Coffin Childs Memorial Fund for Medical Research; Pew Charitable Trusts; National Institutes of Health; National Science Foundation","keywords":"Biology; Cytoplasm; RNA; Chromatin; Polysome; Intron; Cell biology; Gene; Cell nucleus; Messenger RNA; Subcellular localization; Gene expression; Transcription (linguistics); Genetics; Ribosome","score_opus":0.016412302179862472,"score_gpt":0.27814059510086997,"score_spread":0.2617282929210075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400281042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99090236,0.0034783646,0.0047540385,0.00007689136,0.00012148758,0.00029931395,0.00007557004,0.0000069084176,0.00028504658],"genre_scores_gemma":[0.9982851,0.00008631061,0.00021996973,0.00006726218,0.00002511674,0.000014085301,0.000061439394,0.000029711833,0.0012109934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986344,0.00012488876,0.00035447406,0.0003163003,0.00026575808,0.00030418613],"domain_scores_gemma":[0.9991653,0.000011144254,0.00008716099,0.0005616541,0.0000755881,0.00009917339],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032844066,0.00014141385,0.00019216612,0.00003337329,0.000065411914,0.00002974886,0.0003721915,0.00010278882,0.000015527452],"category_scores_gemma":[0.00004689601,0.000113944945,0.00022096778,0.00016449542,0.000115409974,0.0000048049183,0.00008861472,0.000098480894,0.000011325688],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038405364,0.00006294363,0.0045752036,0.00028907333,0.000036800924,0.000014931713,0.00009803483,0.0005476819,0.9936327,0.000008242692,0.00009916796,0.00059686473],"study_design_scores_gemma":[0.00026850012,0.00010646837,0.008521811,0.000048265225,0.000022977383,0.0000020275363,0.00005458279,0.0020985438,0.98691446,0.00003109402,0.0018169095,0.000114378745],"about_ca_topic_score_codex":0.000046496792,"about_ca_topic_score_gemma":0.000022865863,"teacher_disagreement_score":0.007382732,"about_ca_system_score_codex":0.0000119570805,"about_ca_system_score_gemma":0.00007941638,"threshold_uncertainty_score":0.46465403},"labels":[],"label_agreement":null},{"id":"W4400978204","doi":"10.1016/j.molcel.2024.06.028","title":"SARS-CoV-2 Omicron XBB lineage spike structures, conformations, antigenicity, and receptor recognition","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases; Division of Electrical, Communications and Cyber Systems; National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Science Foundation","keywords":"Biology; Antigenicity; Spike (software development); Lineage (genetic); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Receptor; Spike Protein; Evolutionary biology; Virology; 2019-20 coronavirus outbreak; Computational biology; Genetics; Antibody; Gene; Infectious disease (medical specialty); Disease","score_opus":0.029490791306927475,"score_gpt":0.31763619392188736,"score_spread":0.28814540261495986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400978204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98341286,0.0043511214,0.0023006783,0.00030632198,0.00023945738,0.0005234791,0.000051328578,0.00014791134,0.0086668255],"genre_scores_gemma":[0.97877944,0.0001120551,0.0013831459,0.019234402,0.00016970417,0.00002352902,0.00014295851,0.000056837885,0.00009795038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986635,0.00005681694,0.0002858796,0.00035402787,0.00032591674,0.0003138842],"domain_scores_gemma":[0.9994926,0.000039884948,0.0000398658,0.00028332596,0.00010266691,0.00004166148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024252833,0.00019746982,0.00022879327,0.00025678746,0.00007826118,0.00016078295,0.000101897094,0.0001756314,0.000039582774],"category_scores_gemma":[0.000054993037,0.00018035463,0.000117790434,0.00027481656,0.0000877791,0.0001257444,0.000088689194,0.00038440368,0.00040332298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007575659,0.00003945716,0.00017909102,0.00050410244,0.00004717257,0.0001848679,0.00020631429,1.3595371e-7,0.9819,0.000085888816,0.0037384103,0.013038844],"study_design_scores_gemma":[0.0006263862,0.00012507263,0.00005859966,0.0000879304,0.000056824072,0.000049041602,0.000043786215,0.00066395354,0.76078016,0.00022222522,0.23713425,0.00015177549],"about_ca_topic_score_codex":0.00011860499,"about_ca_topic_score_gemma":0.00001041654,"teacher_disagreement_score":0.23339583,"about_ca_system_score_codex":0.000074768715,"about_ca_system_score_gemma":0.00017753942,"threshold_uncertainty_score":0.7354649},"labels":[],"label_agreement":null},{"id":"W4401173915","doi":"10.1016/j.molcel.2024.07.003","title":"The V-ATPase/ATG16L1 axis is controlled by the V1H subunit","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Medical Research Council; Francis Crick Institute; Cancer Research UK; Wellcome Trust","keywords":"Biology; Cell biology; Autophagy; Organelle; ATG16L1; Ubiquitin; Protein subunit; ATG8; ATPase; Membrane; Biophysics; Biochemistry; Enzyme; Gene","score_opus":0.004695814188045361,"score_gpt":0.24432521132197152,"score_spread":0.23962939713392617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401173915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5849519,0.25955144,0.002379199,0.051073577,0.00088337634,0.0022108816,0.00007205957,0.00037565213,0.098501965],"genre_scores_gemma":[0.96097445,0.0006993045,0.000011981552,0.008098297,0.0001093385,0.00008832052,0.00002155668,0.00004439622,0.029952375],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988961,0.000095815085,0.00019435186,0.00022872612,0.00031603576,0.0002689423],"domain_scores_gemma":[0.9990899,0.00017139885,0.000032312677,0.00055570045,0.000043892243,0.00010681068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024412804,0.00016580972,0.00020775205,0.000029110211,0.00018696967,0.00010399357,0.00019858782,0.00007225964,0.0004959825],"category_scores_gemma":[0.000025082894,0.00008141859,0.00030564537,0.00014875385,0.000109514134,0.000023375867,0.000032613432,0.00024568642,0.0005258018],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017994879,0.0004905626,0.0001172797,0.00022511647,0.0020224766,0.0023457643,0.0018495567,0.000009466727,0.30865353,0.0066044643,0.63814664,0.03773563],"study_design_scores_gemma":[0.0032540262,0.00015167362,0.00004472235,0.00003880865,0.0003556685,0.000017472503,0.00011099517,0.0012970284,0.18003957,0.0015828706,0.81296897,0.00013819375],"about_ca_topic_score_codex":0.000028677297,"about_ca_topic_score_gemma":0.0000013192027,"teacher_disagreement_score":0.37602258,"about_ca_system_score_codex":0.000029005754,"about_ca_system_score_gemma":0.00010106952,"threshold_uncertainty_score":0.67582935},"labels":[],"label_agreement":null},{"id":"W4402197358","doi":"10.1016/j.molcel.2024.08.018","title":"PICKLE-mediated nucleosome condensing drives H3K27me3 spreading for the inheritance of Polycomb memory during differentiation","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"PRC2; Chromatin; Nucleosome; Biology; Cell biology; Polycomb-group proteins; Histone; Nucleoprotein; Genetics; Histone H3; DNA; Repressor; Gene; Transcription factor","score_opus":0.011636455634133618,"score_gpt":0.22002843461068336,"score_spread":0.20839197897654974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402197358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99560326,0.0025831324,0.00019025971,0.000598867,0.00018750524,0.00037085227,0.000057725392,0.00006046918,0.00034790277],"genre_scores_gemma":[0.9993573,0.00006003361,0.000055112585,0.00006272049,0.00007239279,0.00001972392,0.000083577565,0.0000030889494,0.0002860827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990079,0.000070166614,0.00018154677,0.00028190538,0.00017676655,0.00028175977],"domain_scores_gemma":[0.99935764,0.00041592188,0.0000507261,0.00008066346,0.00004703404,0.00004798938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016727732,0.00012464929,0.00014702935,0.00002356671,0.00014734468,0.000064856205,0.00024744327,0.00009871682,0.00004094354],"category_scores_gemma":[0.00007127115,0.00004908647,0.0001318814,0.0002348856,0.000094422445,0.000049960086,0.00008621186,0.00014273258,0.000016102475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023400915,0.000020221307,0.00068303494,0.000050941755,0.00003387472,0.000022893175,0.00007408182,0.000008240427,0.9967627,0.00007221846,0.000049044902,0.002199377],"study_design_scores_gemma":[0.0001795801,0.00009456101,0.026288701,0.00006825656,0.000033237004,0.000010440726,0.00015373967,0.0019120809,0.96985054,0.00022317599,0.0010198965,0.00016579514],"about_ca_topic_score_codex":0.00003498322,"about_ca_topic_score_gemma":0.00003829487,"teacher_disagreement_score":0.026912134,"about_ca_system_score_codex":0.00001975328,"about_ca_system_score_gemma":0.0000105151175,"threshold_uncertainty_score":0.20016882},"labels":[],"label_agreement":null},{"id":"W4402391314","doi":"10.1016/j.molcel.2024.08.023","title":"RAPIDASH: Tag-free enrichment of ribosome-associated proteins reveals composition dynamics in embryonic tissue, cancer cells, and macrophages","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institute of Mental Health; National Institutes of Health; Agency for Science, Technology and Research; American Cancer Society; University of California, San Francisco; Dr. Miriam and Sheldon G. Adelson Medical Research Foundation; New York Stem Cell Foundation; Canadian Institutes of Health Research; Damon Runyon Cancer Research Foundation; European Molecular Biology Organization","keywords":"Biology; Ribosome; Translation (biology); Cell biology; Protein biosynthesis; Computational biology; Embryonic stem cell; Ribosome profiling; Gene; Messenger RNA; RNA; Genetics","score_opus":0.004512859683358722,"score_gpt":0.22815093432179587,"score_spread":0.22363807463843716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402391314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.974841,0.019461054,0.0036345113,0.00028628547,0.00015996833,0.0006581088,0.00017711097,0.000020564567,0.00076140265],"genre_scores_gemma":[0.99615616,0.0013179997,0.0011673404,0.00008186944,0.000028436803,0.00011228028,0.00013023439,0.000040919946,0.00096474856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987537,0.00015117557,0.0002539824,0.00040880748,0.00017547613,0.0002568485],"domain_scores_gemma":[0.9994533,0.000012648514,0.0000898544,0.00033772545,0.0000433863,0.000063079766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023823614,0.00019775724,0.00022438554,0.00009108424,0.000035282766,0.00003596657,0.00019598629,0.00020306563,0.000028103581],"category_scores_gemma":[0.000014446358,0.00020016072,0.00007439377,0.00016722764,0.000048088034,0.000004919173,0.00014363076,0.000105455845,0.000004532429],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032643442,0.000090424044,0.00008091534,0.00024125003,0.000049592738,0.000053761596,0.00003869074,0.00006490583,0.99666333,0.00021114023,0.00025264084,0.0022207184],"study_design_scores_gemma":[0.00044154678,0.0002769676,0.00011549303,0.00015982287,0.00003881813,0.0000028275083,0.000025898818,0.00035067007,0.99669385,0.0004969791,0.0011825017,0.00021465344],"about_ca_topic_score_codex":0.00012252791,"about_ca_topic_score_gemma":0.00007415609,"teacher_disagreement_score":0.021315176,"about_ca_system_score_codex":0.00007959536,"about_ca_system_score_gemma":0.00005323891,"threshold_uncertainty_score":0.8162317},"labels":[],"label_agreement":null},{"id":"W4402622603","doi":"10.1016/j.molcel.2024.08.010","title":"Integrated multi-omics analysis of zinc-finger proteins uncovers roles in RNA regulation","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; National Institute of Mental Health; National Institute on Aging; Fonds de Recherche du Québec - Santé; University of California, San Diego; Natural Sciences and Engineering Research Council of Canada; National Science Foundation; Canadian Institutes of Health Research; Chan Zuckerberg Initiative; Association for Women in Science; Myotonic Dystrophy Foundation; National Cancer Institute; National Sleep Foundation; National Institutes of Health","keywords":"Biology; Zinc finger; Computational biology; RNA; Omics; RNA-binding protein; Cell biology; Bioinformatics; Genetics; Gene; Transcription factor","score_opus":0.008977699710030257,"score_gpt":0.2556660673109381,"score_spread":0.24668836760090784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402622603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9653107,0.0012132182,0.032554854,0.00004561797,0.000028215265,0.0001922751,0.00002009131,0.000010527783,0.00062450947],"genre_scores_gemma":[0.99652517,0.00007908154,0.0018511014,0.000037556656,0.000012613097,0.000015892543,0.00027427575,0.000020419984,0.0011839013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990403,0.00007586775,0.0002152647,0.0003100645,0.00015656652,0.00020195488],"domain_scores_gemma":[0.99956715,0.000008103469,0.00003971285,0.00026783717,0.00006381426,0.000053363827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021849874,0.000118545504,0.0001667094,0.00032200397,0.000018170645,0.000032618736,0.00013021802,0.00012239734,0.000017717099],"category_scores_gemma":[0.0000512346,0.00011063093,0.00017022678,0.00072509854,0.000039277777,0.000004447901,0.00006058417,0.000115761955,0.000005111974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041669246,0.00005219454,0.001361102,0.00003803427,0.00019053057,0.000026477424,0.000043926637,0.008129487,0.9877505,0.000045410365,0.000050198956,0.00227048],"study_design_scores_gemma":[0.00026199754,0.00008113569,0.0011015382,0.000026129903,0.000083363564,4.590876e-7,0.0000518446,0.074881665,0.92200226,0.000017148443,0.0013749023,0.00011757176],"about_ca_topic_score_codex":0.00025339,"about_ca_topic_score_gemma":0.00032983447,"teacher_disagreement_score":0.06675218,"about_ca_system_score_codex":0.0000368597,"about_ca_system_score_gemma":0.00009814231,"threshold_uncertainty_score":0.45113984},"labels":[],"label_agreement":null},{"id":"W4402639506","doi":"10.1016/j.molcel.2024.08.037","title":"C2H2-zinc-finger transcription factors bind RNA and function in diverse post-transcriptional regulatory processes","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Zinc finger; Transcription factor; Transcription (linguistics); Function (biology); RNA; Cell biology; Transcriptional regulation; Computational biology; Genetics; Gene","score_opus":0.009482601501125931,"score_gpt":0.21463310882733566,"score_spread":0.20515050732620974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402639506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826106,0.011298429,0.0046270243,0.00012748809,0.000230158,0.00015639493,0.00003552017,0.000022394088,0.00089203735],"genre_scores_gemma":[0.99809736,0.00044120644,0.000085659136,0.00014278923,0.000060602466,0.000028484175,0.0002395193,0.000025557933,0.0008787956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991247,0.000032789365,0.00015035245,0.0003928025,0.00013630824,0.00016305478],"domain_scores_gemma":[0.9996789,0.0000041534217,0.000023034083,0.00016268683,0.00007422128,0.000057011657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008494522,0.00014782962,0.00008548641,0.000107099004,0.00005701219,0.00006322466,0.00007096487,0.00013644206,0.00004717719],"category_scores_gemma":[0.000009012913,0.00014298578,0.00006542641,0.00016026964,0.000055102482,0.000017097818,0.000016007867,0.00010025699,0.0000088171055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045290253,0.000048440084,0.00063625316,0.00014149709,0.000021070806,0.000007649704,0.0001702104,0.00010725709,0.99619454,0.00021843614,0.0001877654,0.0022215976],"study_design_scores_gemma":[0.00070331414,0.00032208642,0.03066767,0.000073702446,0.00009279026,0.000007776241,0.00049193256,0.00016180446,0.8646515,0.0002400067,0.10213469,0.0004527224],"about_ca_topic_score_codex":0.000040625106,"about_ca_topic_score_gemma":0.000053926764,"teacher_disagreement_score":0.13154303,"about_ca_system_score_codex":0.000024715107,"about_ca_system_score_gemma":0.000109982364,"threshold_uncertainty_score":0.5830791},"labels":[],"label_agreement":null},{"id":"W4403028632","doi":"10.1016/j.molcel.2024.09.004","title":"Modulation of fungal phosphate homeostasis by the plant hormone strigolactone","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Tech University; Agriculture and Agri-Food Canada; University of Toronto","funders":"Social Sciences and Humanities Research Council; Alliance de recherche numérique du Canada; Japan Science and Technology Agency; Core Research for Evolutional Science and Technology; Natural Sciences and Engineering Research Council of Canada; Japan Society for the Promotion of Science","keywords":"Strigolactone; Biology; Hormone; Jasmonate; Yeast; Plant hormone; Fungal protein; Arabidopsis; Saccharomyces cerevisiae; Cell biology; Biochemistry; Botany; Gene","score_opus":0.008740370891656388,"score_gpt":0.18892811399592135,"score_spread":0.18018774310426497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403028632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97610384,0.021356987,0.00010515899,0.00036708036,0.000067679124,0.000099023775,0.0006040944,0.000030782554,0.0012653567],"genre_scores_gemma":[0.9989149,0.000374155,0.000014974741,0.000074332005,0.000025050136,0.0000038025821,0.00018213595,8.272204e-7,0.00040985298],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993816,0.00003612833,0.0001165047,0.0001558048,0.0001696308,0.00014030395],"domain_scores_gemma":[0.9998191,0.000059130292,0.00003319667,0.000042838798,0.000011788306,0.000033943008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008866709,0.000080258666,0.00008509633,0.000005286845,0.000060374594,0.000041610376,0.00013439091,0.000048555317,0.000046819736],"category_scores_gemma":[0.0000028554211,0.000025138721,0.00006159015,0.00018640091,0.00003309312,0.00004198766,0.000020877489,0.00007207524,0.000024223615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016770216,0.000022585105,0.00006340878,0.000009232985,0.00000985485,0.000041909934,0.000018340685,0.000016111995,0.98250276,0.00013236026,0.004709055,0.012457642],"study_design_scores_gemma":[0.00012646036,0.00015276123,0.023571333,0.00003561239,0.00003428833,0.000015948139,0.000065504035,0.0014261217,0.89079493,0.00025358846,0.083312444,0.0002109813],"about_ca_topic_score_codex":0.00009559591,"about_ca_topic_score_gemma":0.000015852413,"teacher_disagreement_score":0.09170777,"about_ca_system_score_codex":0.0000075118105,"about_ca_system_score_gemma":0.0000041845915,"threshold_uncertainty_score":0.10251273},"labels":[],"label_agreement":null},{"id":"W4404107499","doi":"10.1016/j.molcel.2024.10.016","title":"Profound synthetic lethality between SMARCAL1 and FANCM","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Lethality; Synthetic lethality; Cell biology; Genetics; DNA repair; DNA","score_opus":0.008678169778705157,"score_gpt":0.25475851063454186,"score_spread":0.2460803408558367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404107499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9743917,0.010229071,0.00874496,0.000245856,0.00012195528,0.00012967248,0.000018112532,0.00003847291,0.006080231],"genre_scores_gemma":[0.99771816,0.00013006794,0.0006170758,0.00016652391,0.00014677258,0.000013935564,0.000052546882,0.00003162732,0.0011233091],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991062,0.000048826227,0.00013633314,0.00040124607,0.00011397711,0.00019339114],"domain_scores_gemma":[0.99956566,0.00001025976,0.000018679977,0.00028489984,0.000023166955,0.00009734456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015941916,0.00013696562,0.00011182105,0.000025144056,0.000043760094,0.00006301061,0.00009755001,0.00012065941,0.000023071281],"category_scores_gemma":[0.000023210385,0.00012823052,0.0000783544,0.000059725287,0.00006611447,0.0000019841439,0.00009229862,0.00010410093,0.000023966919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008503136,0.000019137082,0.00044351578,0.00027012557,0.00005346642,0.00003236375,0.000054927077,0.000038394155,0.9818304,0.00013495848,0.0008905595,0.016223604],"study_design_scores_gemma":[0.00028437324,0.00014918663,0.00042461779,0.00007975505,0.000088385445,0.000021823244,0.000029336743,0.0007357017,0.8682284,0.0009698509,0.12861183,0.00037673436],"about_ca_topic_score_codex":0.0000218388,"about_ca_topic_score_gemma":0.000002951335,"teacher_disagreement_score":0.12772128,"about_ca_system_score_codex":0.000012910071,"about_ca_system_score_gemma":0.000069901216,"threshold_uncertainty_score":0.52290887},"labels":[],"label_agreement":null},{"id":"W4404137287","doi":"10.1016/j.molcel.2024.10.018","title":"A road to rupture: New insights into the loss of micronuclear membrane integrity","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Princess Margaret Cancer Centre; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Princess Margaret Cancer Foundation; Terry Fox Research Institute; Ministry of Health, Ontario","keywords":"Biology; Cell biology; Structural integrity; Membrane; Biochemistry; Structural engineering","score_opus":0.005682256045362131,"score_gpt":0.23119630129318672,"score_spread":0.2255140452478246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404137287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98157066,0.008172434,0.005034052,0.0014875478,0.00016007086,0.00020054332,0.0000038105115,0.000019799914,0.0033510705],"genre_scores_gemma":[0.9954402,0.000073617135,0.0006240196,0.0012312935,0.000095757525,0.0000053883196,0.00003484083,0.000025253526,0.0024696363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992244,0.000056771063,0.00015720197,0.0002870133,0.00014171364,0.0001328772],"domain_scores_gemma":[0.99936175,0.00000495009,0.000025710333,0.00041024806,0.000045517038,0.00015182282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006996972,0.00013121212,0.000099656856,0.0000457924,0.00003565901,0.00004176949,0.00023274009,0.00010711048,0.00006270807],"category_scores_gemma":[0.00002953404,0.000094785144,0.00014781927,0.00017367379,0.00005584724,0.000002840434,0.00011868918,0.0001008162,0.00008264519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005329851,0.0000368574,0.000033985365,0.00004885745,0.00003152562,0.00002814019,0.00045879086,0.00014675027,0.98909926,0.0005220957,0.0057641068,0.0037763407],"study_design_scores_gemma":[0.00019207322,0.00007862939,0.00029424662,0.000017675242,0.00002696389,0.0000030596354,0.000051549716,0.00016233373,0.7106263,0.00024414257,0.28818148,0.00012154268],"about_ca_topic_score_codex":0.00012802424,"about_ca_topic_score_gemma":0.000027080203,"teacher_disagreement_score":0.28241736,"about_ca_system_score_codex":0.000010751334,"about_ca_system_score_gemma":0.00013402961,"threshold_uncertainty_score":0.3865226},"labels":[],"label_agreement":null},{"id":"W4404299430","doi":"10.1016/j.molcel.2024.10.024","title":"PARP enzyme de novo synthesis of protein-free poly(ADP-ribose)","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; National Cancer Institute; National Institutes of Health; University of Oxford; Canada Foundation for Innovation; Canadian Institutes of Health Research; National Research Council; University of Saskatchewan; Canadian Light Source","keywords":"Biology; Poly ADP ribose polymerase; Enzyme; Ribose; Biochemistry; Molecular biology; Polymerase","score_opus":0.009381297734575283,"score_gpt":0.2587283121712924,"score_spread":0.2493470144367171,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404299430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83081,0.035946243,0.02841138,0.009140952,0.00047634618,0.001440027,0.00014643901,0.00047883426,0.09314979],"genre_scores_gemma":[0.9930819,0.000069608395,0.003811024,0.0006747689,0.00018786466,0.00014839793,0.000007815804,0.00006609952,0.0019525156],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987402,0.00006780497,0.00026225825,0.00029494992,0.00034550336,0.0002892764],"domain_scores_gemma":[0.9990666,0.000058236903,0.00005063689,0.00063270034,0.000058020305,0.00013381474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002107788,0.00016666918,0.00026160615,0.00014525141,0.000024473386,0.000018471104,0.00016982468,0.00011809014,0.0005374582],"category_scores_gemma":[0.00008299246,0.0001580447,0.00019279553,0.00027327499,0.00008374541,0.00003628439,0.000047467925,0.00019510432,0.00012516555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104827304,0.00012099664,0.000054180862,0.00060126145,0.0000918491,0.0007556571,0.00016524116,0.000008301022,0.98991346,0.0007208672,0.0031948215,0.004268519],"study_design_scores_gemma":[0.00079609395,0.00013107072,0.000037968686,0.0005153758,0.00009856763,0.00006004132,0.000026234644,0.00013160425,0.94608414,0.0009970581,0.05098175,0.00014009846],"about_ca_topic_score_codex":0.00004308028,"about_ca_topic_score_gemma":0.0000014260476,"teacher_disagreement_score":0.16227192,"about_ca_system_score_codex":0.0001333428,"about_ca_system_score_gemma":0.0002533613,"threshold_uncertainty_score":0.64448756},"labels":[],"label_agreement":null},{"id":"W4404583602","doi":"10.1016/j.molcel.2024.10.043","title":"Lost in translation: Threonine dictates aggregation of CAT tails","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Biology; Translation (biology); Threonine; Computational biology; Evolutionary biology; Cell biology; Genetics; Phosphorylation; Serine","score_opus":0.009016998071066373,"score_gpt":0.25645111055229464,"score_spread":0.24743411248122826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404583602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98141754,0.008724856,0.005498319,0.00021498758,0.00004023472,0.000174406,0.0000073639712,0.0000064640362,0.003915854],"genre_scores_gemma":[0.99785215,0.0002643465,0.0006567443,0.00003364316,0.00002900517,0.0000107796695,0.00008715214,0.000015490225,0.0010506875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999341,0.00003553365,0.00014758683,0.00019807344,0.00012270758,0.00015506336],"domain_scores_gemma":[0.9997498,0.000008975367,0.000017645381,0.0001557616,0.000028013752,0.00003981777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001240601,0.00007960672,0.00008094029,0.00007387143,0.000012184006,0.000019278652,0.00008665015,0.000070321126,0.00003012449],"category_scores_gemma":[0.0000131697125,0.00007565624,0.00006293983,0.00015826918,0.000035111207,0.000003757493,0.000021915846,0.00005724096,0.000017741753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021712127,0.000022967499,0.0005956265,0.00008463333,0.000011551735,0.0000397311,0.000054294906,0.00024346632,0.98974043,0.00006379975,0.00012229917,0.008999506],"study_design_scores_gemma":[0.00025312664,0.0001221735,0.00018314952,0.000046218585,0.0000060375223,0.000003069978,0.000025489479,0.002888398,0.9913211,0.00011195839,0.004955405,0.00008390373],"about_ca_topic_score_codex":0.000038951956,"about_ca_topic_score_gemma":0.00003922871,"teacher_disagreement_score":0.016434638,"about_ca_system_score_codex":0.000009434259,"about_ca_system_score_gemma":0.00005850813,"threshold_uncertainty_score":0.3085172},"labels":[],"label_agreement":null},{"id":"W4405063828","doi":"10.1016/j.molcel.2024.11.005","title":"Silent silencers: Leave no trace","year":2024,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Music History and Culture","field":"Arts and Humanities","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; TRACE (psycholinguistics); Genetics; Computational biology; Linguistics","score_opus":0.015261401017202579,"score_gpt":0.18435232334613816,"score_spread":0.16909092232893558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405063828","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000084160674,0.0073001846,0.00001651208,0.069662385,0.004880142,0.00025958262,0.00015152985,0.0001745685,0.91747093],"genre_scores_gemma":[0.0007267174,0.000013428148,0.000017780087,0.42732254,0.008577331,0.000039329403,0.00023722756,0.00008181404,0.5629839],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984157,0.00007525536,0.00023471664,0.0005296074,0.0003852513,0.00035947718],"domain_scores_gemma":[0.9993309,0.000015131653,0.000086161104,0.000431781,0.00008487793,0.000051195988],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00006452172,0.0003932671,0.0002979027,0.00008274942,0.00018955622,0.00028420083,0.00032821842,0.0004417777,0.033890195],"category_scores_gemma":[0.000004708952,0.00033373837,0.00037747982,0.000025506091,0.0001793761,0.00005676169,0.000050307815,0.0017160625,0.01382265],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000024920469,0.000019698608,1.6163787e-8,0.00061636436,0.00004820156,0.002484243,0.014709185,0.00000156046,0.00029289167,0.0017607724,0.9798881,0.00017651463],"study_design_scores_gemma":[0.00007784205,0.000057697,9.297233e-9,0.00013724061,0.00015543317,0.0000037392222,0.0003791992,0.000008550053,0.0003122767,0.00033055843,0.9980899,0.00044756115],"about_ca_topic_score_codex":0.00005563969,"about_ca_topic_score_gemma":0.000038415772,"teacher_disagreement_score":0.35766014,"about_ca_system_score_codex":0.00009297495,"about_ca_system_score_gemma":0.000067070694,"threshold_uncertainty_score":0.9999115},"labels":[],"label_agreement":null},{"id":"W4405638499","doi":"10.1016/j.molcel.2024.11.033","title":"Mutability and hypermutation antagonize immunoglobulin codon optimality","year":2024,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; National Cancer Institute; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Leukemia and Lymphoma Society","keywords":"Somatic hypermutation; Biology; Genetics; Antibody; Computational biology; B cell","score_opus":0.00868993809292268,"score_gpt":0.28757656663686565,"score_spread":0.27888662854394297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405638499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9813771,0.0058795535,0.0022200472,0.0004946826,0.00010489703,0.00041214513,0.000010247876,0.0001225637,0.00937874],"genre_scores_gemma":[0.9974388,0.00012858184,0.0014737102,0.00016920314,0.000043639233,0.0000166913,0.00004813132,0.000030133122,0.00065110263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869114,0.000073365845,0.00020858299,0.00041390138,0.00034566264,0.00026731755],"domain_scores_gemma":[0.9993198,0.00008438526,0.000017119137,0.0003731479,0.000066717206,0.00013882462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038920093,0.00013621835,0.00019652574,0.00006909329,0.00004191582,0.00007213957,0.000065830136,0.000103585626,0.0001663493],"category_scores_gemma":[0.00009018761,0.00012056162,0.00008597545,0.00022335218,0.00013629044,0.00006125024,0.00008912159,0.00022373421,0.00015312718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039434677,0.00032773826,0.001306262,0.0035344628,0.00017862515,0.006362661,0.0010589801,0.00012383897,0.9587235,0.0008420521,0.0007952192,0.026352314],"study_design_scores_gemma":[0.012765201,0.0005714969,0.0057592723,0.00031704138,0.00036419943,0.001381737,0.00025445048,0.13370867,0.8194831,0.0008797857,0.023962768,0.0005522934],"about_ca_topic_score_codex":0.0003441066,"about_ca_topic_score_gemma":0.0000018076878,"teacher_disagreement_score":0.13924041,"about_ca_system_score_codex":0.0022084948,"about_ca_system_score_gemma":0.0015220027,"threshold_uncertainty_score":0.5775137},"labels":[],"label_agreement":null},{"id":"W4406270192","doi":"10.1016/j.molcel.2024.12.016","title":"RBBP6 anchors pre-mRNA 3′ end processing to nuclear speckles for efficient gene expression","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; Hewitt Foundation; Chan Zuckerberg Initiative; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; National Institute of Environmental Health Sciences; American Cancer Society","keywords":"Biology; RNA splicing; Messenger RNA; Precursor mRNA; Gene expression; Molecular biology; Cell biology; Gene; RNA; Genetics","score_opus":0.0058256429402983945,"score_gpt":0.2628020312752402,"score_spread":0.2569763883349418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406270192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9296879,0.0014153577,0.06544028,0.00019877533,0.00007057479,0.000543497,0.000011450584,0.00001916861,0.002612999],"genre_scores_gemma":[0.98520076,0.000026491773,0.010713814,0.00055952324,0.00007611383,0.000058604495,0.000042743886,0.000035232984,0.003286709],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987072,0.000060712046,0.00017636058,0.00047798041,0.00017372692,0.00040405066],"domain_scores_gemma":[0.99933904,0.000010570217,0.000041148058,0.00036525758,0.000097694945,0.00014630666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023611999,0.00016243545,0.00013716283,0.00009159358,0.00022206373,0.00007088628,0.00027265403,0.00011497122,0.0000123543105],"category_scores_gemma":[0.000112534624,0.00015444699,0.00011132551,0.00014513363,0.00003583026,0.0000023336306,0.00020507764,0.00011562854,0.0000096904705],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017233021,0.00007765213,0.000054558066,0.00009776093,0.000011655882,0.0000074828927,0.000054447115,0.0013508396,0.9887466,0.000017211554,0.002676892,0.006732591],"study_design_scores_gemma":[0.00048605906,0.00017628534,0.00010275263,0.00005681196,0.000010793092,0.0000011866914,0.00006188117,0.0012755034,0.95702416,0.000022258557,0.04062043,0.00016190873],"about_ca_topic_score_codex":0.00000881578,"about_ca_topic_score_gemma":0.0000028126874,"teacher_disagreement_score":0.05551287,"about_ca_system_score_codex":0.000025920335,"about_ca_system_score_gemma":0.00008768034,"threshold_uncertainty_score":0.6298165},"labels":[],"label_agreement":null},{"id":"W4406972424","doi":"10.1016/j.molcel.2025.01.004","title":"A PARP2 active site helix melts to permit DNA damage-induced enzymatic activation","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institutes of Health; National Cancer Institute; University of Pennsylvania","keywords":"Biology; Helix (gastropod); DNA; Enzyme; DNA damage; Biophysics; Cell biology; Active site; Biochemistry; DNA Ligases; Genetics; DNA repair; Molecular biology; Ecology","score_opus":0.011912244729366563,"score_gpt":0.29764059049562624,"score_spread":0.28572834576625966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406972424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95103675,0.00006280574,0.0088227205,0.003709731,0.00016111087,0.0008523134,0.000009345976,0.00010110462,0.035244104],"genre_scores_gemma":[0.9872399,0.000006845959,0.0009096536,0.008723161,0.00006105781,0.00015725635,0.000047799735,0.000034191537,0.0028201297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986885,0.000091886985,0.00024888603,0.00038140942,0.0003161407,0.00027314946],"domain_scores_gemma":[0.9990618,0.000054723194,0.00007857738,0.00051248365,0.00014615284,0.00014621572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116827476,0.00020199564,0.0002821312,0.00025976257,0.00007618773,0.000028328217,0.00010439918,0.000117262134,0.00022164959],"category_scores_gemma":[0.00008015598,0.00020565392,0.00011756172,0.00056067837,0.000022240793,0.00007630242,0.000050541385,0.00021901166,0.00028259374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002832563,0.00013987748,0.00009798256,0.000116520496,0.00006386681,0.000052259744,0.0008556171,0.0000404656,0.9929377,0.00015156296,0.0021119101,0.0031490077],"study_design_scores_gemma":[0.002437328,0.0001868499,0.0027356779,0.00030104298,0.00007358887,0.000003112143,0.00017340356,0.00018153994,0.9852121,0.00026352218,0.00825595,0.0001758822],"about_ca_topic_score_codex":0.000046892226,"about_ca_topic_score_gemma":0.000006008368,"teacher_disagreement_score":0.03620314,"about_ca_system_score_codex":0.00033680117,"about_ca_system_score_gemma":0.00018510241,"threshold_uncertainty_score":0.83863235},"labels":[],"label_agreement":null},{"id":"W4407194176","doi":"10.1016/j.molcel.2025.01.009","title":"Biomolecular condensates: It was RNA all along!","year":2025,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health; Université de Montréal","keywords":"Biology; RNA; Computational biology; Cell biology; Genetics; Gene","score_opus":0.01098720708011423,"score_gpt":0.2338024591329938,"score_spread":0.22281525205287958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407194176","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010097222,0.023263412,0.070407905,0.7589446,0.0037695793,0.004198722,0.0007174991,0.00032041728,0.1282807],"genre_scores_gemma":[0.017894553,0.00043179467,0.003342523,0.92947245,0.0014348133,0.00023897894,0.0036673816,0.00028882409,0.04322871],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99587834,0.0004204851,0.00063127157,0.0014979524,0.0005927156,0.0009792552],"domain_scores_gemma":[0.99742633,0.000037200167,0.00030946414,0.0018868878,0.00018666808,0.00015346361],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00030608336,0.000923968,0.0006790515,0.00023011953,0.0001155469,0.00014385562,0.0011791855,0.0024204298,0.00023958119],"category_scores_gemma":[0.00010206726,0.0009671331,0.0007510655,0.00019106963,0.0001323727,0.0000038076432,0.0004555347,0.0009043947,0.00032119025],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016725638,0.00002665374,0.0000010437064,0.00016394097,0.00019790085,0.0010068644,0.0000088625075,0.0000046705118,0.5270748,0.000010415263,0.47100273,0.00048541027],"study_design_scores_gemma":[0.00028737154,0.00012324027,1.9877433e-7,0.000060110124,0.00014309598,0.000014577092,0.000005629501,0.00000405784,0.49352047,0.00025746072,0.5050454,0.0005383414],"about_ca_topic_score_codex":0.00006425783,"about_ca_topic_score_gemma":0.0000054098687,"teacher_disagreement_score":0.17052788,"about_ca_system_score_codex":0.000048399324,"about_ca_system_score_gemma":0.00032670816,"threshold_uncertainty_score":0.9992779},"labels":[],"label_agreement":null},{"id":"W4408332058","doi":"10.1016/j.molcel.2025.02.012","title":"Profiling transcriptome composition and dynamics within nuclear compartments using SLAM-RT&Tag","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Aging; Natural Sciences and Engineering Research Council of Canada; Howard Hughes Medical Institute","keywords":"Biology; Transcriptome; Computational biology; Profiling (computer programming); Gene expression profiling; Cell biology; Composition (language); Dynamics (music); Genetics; Gene expression; Gene","score_opus":0.011496536117941375,"score_gpt":0.2722371235775859,"score_spread":0.2607405874596445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408332058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.969833,0.0005438174,0.026868902,0.000079889774,0.00007457168,0.0002522119,0.00001348644,0.000015552321,0.0023185413],"genre_scores_gemma":[0.99173594,0.000029910798,0.007140762,0.00032131514,0.00001669187,0.000005328797,0.00015327796,0.000023686673,0.00057306926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899596,0.00007558843,0.00017843214,0.00032119273,0.00016941137,0.00025940838],"domain_scores_gemma":[0.99955577,0.000003895149,0.00004223094,0.0002386942,0.00007501556,0.0000843971],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016361756,0.00014621724,0.00014040462,0.00007326227,0.00014552815,0.000062501764,0.00012639492,0.00010790921,0.0000041251387],"category_scores_gemma":[0.000011169325,0.00015506691,0.000064517495,0.00010734767,0.0000703484,0.000004993868,0.00008586972,0.00012705274,0.0000041414805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007331069,0.00005604757,0.0008815895,0.000072320996,0.00004170094,0.000010927251,0.00002462116,0.00049192435,0.9975695,0.0005340062,0.000059225837,0.00018484457],"study_design_scores_gemma":[0.0012788813,0.00013041301,0.00019074207,0.00006581149,0.00005447931,0.000013508542,0.00013461612,0.044404138,0.95121825,0.000108277294,0.0021081462,0.0002927288],"about_ca_topic_score_codex":0.000029654198,"about_ca_topic_score_gemma":0.0000158038,"teacher_disagreement_score":0.046351224,"about_ca_system_score_codex":0.000048755326,"about_ca_system_score_gemma":0.00005555734,"threshold_uncertainty_score":0.6323445},"labels":[],"label_agreement":null},{"id":"W4408899521","doi":"10.1016/j.molcel.2025.03.004","title":"Widespread variation in molecular interactions and regulatory properties among transcription factor isoforms","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Ontario Institute for Cancer Research","funders":"National Institute of General Medical Sciences; Belgian American Educational Foundation; Melanoma Research Foundation; National Human Genome Research Institute; Wallonie-Bruxelles International; Charles A. King Trust; Fonds De La Recherche Scientifique - FNRS; Melanoma Research Alliance; National Cancer Institute; National Institutes of Health; Andrew Sabin Family Foundation; Fonds Léon Fredericq","keywords":"Biology; Transcription factor; Gene isoform; Variation (astronomy); Computational biology; Genetics; Cell biology; Gene","score_opus":0.004137365612858731,"score_gpt":0.1909724569667155,"score_spread":0.18683509135385676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408899521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97499907,0.00077205314,0.02220323,0.000097190736,0.00013869276,0.00025982747,0.0000070531178,0.000012500544,0.0015103621],"genre_scores_gemma":[0.9980897,0.00007144635,0.0007651393,0.00018725538,0.000010868206,0.000036023608,0.00004388253,0.000020114776,0.0007755917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991552,0.00004870402,0.00022379335,0.00031508846,0.00007786121,0.00017933665],"domain_scores_gemma":[0.99958277,0.0000034616205,0.000057253965,0.00027192725,0.000043457203,0.00004112472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007925336,0.00015537755,0.00012270606,0.00010722186,0.000051753363,0.000045735418,0.00010728233,0.0001318012,0.00000591868],"category_scores_gemma":[0.00002063707,0.0001565845,0.00006690037,0.000101151374,0.000054368324,0.000009438911,0.00006047573,0.000106804524,0.0000018565164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002357502,0.000056322286,0.0014933558,0.00005627172,0.000025237103,0.0000045535435,0.00014408384,0.0006481342,0.99662685,0.00023299744,0.000026306,0.0006623233],"study_design_scores_gemma":[0.00062474987,0.00007100867,0.0287658,0.000057847294,0.000027413987,0.00000268036,0.000101691876,0.0037313153,0.9646995,0.0004413605,0.0012447598,0.00023185121],"about_ca_topic_score_codex":0.00006660073,"about_ca_topic_score_gemma":0.000115164556,"teacher_disagreement_score":0.031927317,"about_ca_system_score_codex":0.00003707722,"about_ca_system_score_gemma":0.00005530999,"threshold_uncertainty_score":0.63853306},"labels":[],"label_agreement":null},{"id":"W4409177439","doi":"10.1016/j.molcel.2025.02.027","title":"Metabolite tunes MDV pathway to maintain mitochondrial fitness","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Diet and metabolism studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Institute of Aging; National Institute of Diabetes and Digestive and Kidney Diseases; University of Pittsburgh","keywords":"Biology; Metabolite; Mitochondrion; Computational biology; Cell biology; Genetics; Evolutionary biology; Biochemistry","score_opus":0.0065426868922394054,"score_gpt":0.25095781772273335,"score_spread":0.24441513083049393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409177439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6522043,0.012550206,0.02679103,0.0064788577,0.0046911454,0.0018579967,0.000042090458,0.00026329074,0.29512113],"genre_scores_gemma":[0.8877714,0.00018970443,0.012769186,0.010616827,0.000587044,0.00024313593,0.00005661382,0.00006912171,0.08769692],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99872977,0.00005332189,0.00024026097,0.0003605869,0.00024311616,0.0003729709],"domain_scores_gemma":[0.99923694,0.00002531808,0.00003313772,0.00042475868,0.0001221053,0.0001577675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011542893,0.00021327709,0.0004547917,0.00019243453,0.000071919545,0.000028879218,0.00013072163,0.00008076676,0.000054079206],"category_scores_gemma":[0.00012916271,0.00018297143,0.00020273095,0.00043058448,0.00004524026,0.00002784496,0.00015112392,0.0001361307,0.00015361153],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035147765,0.00032859886,0.0009952722,0.0002460336,0.00024568822,0.0003897779,0.0005431562,0.000020554835,0.9320462,0.037137195,0.010695082,0.017000997],"study_design_scores_gemma":[0.0015170493,0.00006331367,0.0037562407,0.00005049436,0.00024941962,0.0000012362506,0.00018468303,0.000007530462,0.30763894,0.00089400023,0.6854626,0.00017452169],"about_ca_topic_score_codex":0.00003457108,"about_ca_topic_score_gemma":0.0000055730247,"teacher_disagreement_score":0.6747675,"about_ca_system_score_codex":0.00002407679,"about_ca_system_score_gemma":0.000107394575,"threshold_uncertainty_score":0.74613583},"labels":[],"label_agreement":null},{"id":"W4409199085","doi":"10.1016/j.molcel.2025.03.010","title":"A nuclear RNA degradation code is recognized by PAXT for eukaryotic transcriptome surveillance","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; Hewitt Foundation; Chao Family Comprehensive Cancer Center; Washington Research Foundation","keywords":"Biology; Transcriptome; RNA; Computational biology; Degradation (telecommunications); Cell biology; Code (set theory); Genetics; Gene; Gene expression; Computer science; Set (abstract data type)","score_opus":0.007555864034406408,"score_gpt":0.22536368474388835,"score_spread":0.21780782070948193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409199085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72182286,0.0045875553,0.26398453,0.0014460074,0.00037429045,0.0011405472,0.00025346508,0.000055131313,0.00633565],"genre_scores_gemma":[0.9857295,0.00025441532,0.005141969,0.0023678045,0.000031147687,0.00009190475,0.0002690091,0.000050781928,0.00606346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885,0.000106400665,0.00021838456,0.00044909437,0.00010852588,0.00026761214],"domain_scores_gemma":[0.99940586,0.000017662815,0.000068400026,0.00036989784,0.00007759983,0.000060588816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023336659,0.00018790578,0.0001890007,0.00004331537,0.00009421309,0.000040113046,0.00023329082,0.0001948742,0.00005646649],"category_scores_gemma":[0.000054618347,0.00019790251,0.00017972186,0.00010740352,0.000029309538,0.0000033977185,0.000031365696,0.000056703255,0.000018179822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014609772,0.000053074724,0.00003226908,0.000063119616,0.000048809656,0.0000016197217,0.000021764585,0.0000024391163,0.97831744,0.00008550252,0.0142292315,0.0069986545],"study_design_scores_gemma":[0.0008797668,0.0001370692,0.00001863258,0.000014437548,0.000028077235,8.059738e-7,0.000020821664,0.000102172344,0.86866224,0.00043935791,0.12949888,0.00019776888],"about_ca_topic_score_codex":0.000008669869,"about_ca_topic_score_gemma":0.000004239471,"teacher_disagreement_score":0.2639067,"about_ca_system_score_codex":0.000013632,"about_ca_system_score_gemma":0.000043843225,"threshold_uncertainty_score":0.80702305},"labels":[],"label_agreement":null},{"id":"W4409283259","doi":"10.1016/j.molcel.2025.03.015","title":"MLKL activity requires a splicing-regulated, druggable intramolecular interaction","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Melanoma and MAPK Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"European Research Council; Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Bundesministerium für Bildung und Forschung; Max-Planck-Gesellschaft; Deutsche Forschungsgemeinschaft; Canada Research Chairs; Wellcome Trust; Alexander von Humboldt-Stiftung","keywords":"Biology; Druggability; Intramolecular force; RNA splicing; Alternative splicing; Computational biology; Cell biology; Genetics; Gene; Gene isoform; Stereochemistry; RNA","score_opus":0.00469308000108386,"score_gpt":0.23257445785790754,"score_spread":0.22788137785682366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409283259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9138655,0.0006619886,0.031730488,0.00020519755,0.00041427874,0.00029516983,0.000006969577,0.000049085927,0.052771334],"genre_scores_gemma":[0.9939572,0.00004875821,0.0006509848,0.00068731536,0.00007868805,0.000041963594,0.000090907815,0.00003536474,0.0044087693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851435,0.00012092866,0.00022818113,0.0005942624,0.00015869009,0.00038356977],"domain_scores_gemma":[0.9990049,0.000010208208,0.00009788068,0.0007035458,0.00008542685,0.000098063254],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016275934,0.00026763862,0.00021481191,0.00012103235,0.000113861766,0.00006159593,0.0002699993,0.0002528501,0.000040286766],"category_scores_gemma":[0.000051896746,0.00028164167,0.00018526091,0.00022175619,0.00006388436,0.000008569425,0.00021393293,0.00018394295,0.000047812206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012319049,0.0001309206,0.00013174121,0.000061261286,0.000066166176,0.00004711787,0.000025194766,0.00023638515,0.991217,0.00040373675,0.0033268526,0.004230434],"study_design_scores_gemma":[0.00059046363,0.00016828644,0.00018046096,0.000033174136,0.000046987145,0.000010038046,0.000034790188,0.00035754536,0.9220979,0.00021942402,0.076006964,0.00025394023],"about_ca_topic_score_codex":0.00009603338,"about_ca_topic_score_gemma":0.000020167416,"teacher_disagreement_score":0.08009176,"about_ca_system_score_codex":0.000039451876,"about_ca_system_score_gemma":0.00011159319,"threshold_uncertainty_score":0.9999636},"labels":[],"label_agreement":null},{"id":"W4409329478","doi":"10.1016/j.molcel.2025.02.030","title":"Proton perception and activation of a proton-sensing GPCR","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Education and Child Care","funders":"Zhejiang University; Key Research and Development Program of Zhejiang Province; Ministry of Science and Technology of the People's Republic of China; Natural Science Foundation of Zhejiang Province; National Natural Science Foundation of China","keywords":"Biology; Proton; G protein-coupled receptor; Perception; Computational biology; Cell biology; Signal transduction; Neuroscience; Physics; Nuclear physics","score_opus":0.01980957324834061,"score_gpt":0.29857007749349523,"score_spread":0.27876050424515464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409329478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98129547,0.000013421456,0.0069992165,0.0000711965,0.000024003908,0.0013476886,0.0000013716054,0.000015168389,0.010232474],"genre_scores_gemma":[0.998934,0.000025304525,0.00060015265,0.00011869815,0.0000052810947,0.0000475138,0.0000012814502,0.00000787994,0.00025991935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992471,0.00009254854,0.00010717966,0.00022468416,0.0001953241,0.0001332114],"domain_scores_gemma":[0.9997146,0.000028836092,0.000032639648,0.00015105924,0.000041833046,0.000031037678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009497449,0.00006795435,0.000077208555,0.00011558191,0.000055724915,0.000028525767,0.00007797439,0.00004713747,0.000018325729],"category_scores_gemma":[0.00009870978,0.00006630375,0.000027634984,0.0002337361,0.00007207347,0.000039084764,0.00006834664,0.00009163034,0.000004687801],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003165882,0.000033913275,0.00036509437,0.00015404505,9.670493e-7,0.0000019762979,0.00012090152,0.000011712132,0.99554366,0.00007123117,0.000010562267,0.0036542797],"study_design_scores_gemma":[0.000242841,0.00005899628,0.000331778,0.00003303335,0.0000028757202,6.685056e-7,0.000025129768,0.0026625502,0.9950391,0.00036964653,0.0011777678,0.00005558682],"about_ca_topic_score_codex":0.000019466324,"about_ca_topic_score_gemma":2.8811036e-7,"teacher_disagreement_score":0.01763851,"about_ca_system_score_codex":0.000025625446,"about_ca_system_score_gemma":0.000042564297,"threshold_uncertainty_score":0.27037886},"labels":[],"label_agreement":null},{"id":"W4409540098","doi":"10.1016/j.molcel.2025.03.021","title":"Tripartite phosphorylation of SPT5 by CDK9 times pause release and tunes elongation rate of RNA polymerase II","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; Albert Einstein College of Medicine, Yeshiva University; National Cancer Institute; National Institutes of Health; Georgia Clinical and Translational Science Alliance; McGill University; Stanford University","keywords":"Biology; RNA polymerase II; Elongation; Phosphorylation; Polymerase; Cell biology; Rna processing; RNA; Molecular biology; Genetics; Gene expression; Gene; Promoter","score_opus":0.0018658882212882915,"score_gpt":0.18922311877844616,"score_spread":0.18735723055715786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409540098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99124455,0.0037328578,0.003627641,0.00008978356,0.000042682062,0.00013691314,0.00004050983,0.0000041111775,0.0010809628],"genre_scores_gemma":[0.99725896,0.00029214332,0.00049875304,0.000113726506,0.0000069838243,0.0000059411327,0.00021743063,0.000012633784,0.0015934027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99934095,0.000046664925,0.0002465729,0.00020236903,0.000055573862,0.000107858774],"domain_scores_gemma":[0.99950325,0.000007445119,0.00014716672,0.00023903647,0.00006643409,0.000036683825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010578894,0.00011209335,0.00013990205,0.00004212447,0.000042862583,0.000008015501,0.00008003878,0.00010058238,0.000009439356],"category_scores_gemma":[0.000023632983,0.000119226985,0.000057624973,0.00008939844,0.000057222253,0.0000028557693,0.000080129365,0.000039044313,6.563687e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061899496,0.000080913764,0.00030438564,0.000066807304,0.000033544755,0.0000011753029,0.000038403563,0.00017124043,0.9971197,0.00014750418,0.00079516246,0.0011792234],"study_design_scores_gemma":[0.00064702804,0.00013896223,0.00030271956,0.00001716578,0.000043482785,4.2598543e-7,0.000029855104,0.0013555179,0.9955327,0.00021936517,0.0016104102,0.000102357066],"about_ca_topic_score_codex":0.00006080326,"about_ca_topic_score_gemma":0.0000062034214,"teacher_disagreement_score":0.0060144463,"about_ca_system_score_codex":0.000005905558,"about_ca_system_score_gemma":0.00004729833,"threshold_uncertainty_score":0.4861935},"labels":[],"label_agreement":null},{"id":"W4410816879","doi":"10.1016/j.molcel.2025.05.008","title":"A disordered linker in the Polycomb protein Polyhomeotic tunes phase separation and oligomerization","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Montreal Clinical Research Institute","funders":"U.S. Naval Research Laboratory; National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; National Science Foundation; Canadian Institutes of Health Research; Institute of Genetics; National Institutes of Health; Canada Research Chairs; Office of Naval Research; High Performance Research Computing, Texas A and M University; Canada Foundation for Innovation; Welch Foundation; Université de Montréal","keywords":"Biology; Linker; Cell biology; Intrinsically disordered proteins; Phase (matter); Separation (statistics); Biophysics; Physics; Computer science","score_opus":0.005514117252369757,"score_gpt":0.28809832690435166,"score_spread":0.2825842096519819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410816879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851022,0.0012878308,0.010996169,0.0007224122,0.000016373644,0.0004351601,0.0000023283578,0.0000049493838,0.0014326092],"genre_scores_gemma":[0.9977745,0.00006554947,0.00013789798,0.00035491548,0.000014404838,0.00006256147,0.00007141962,0.00000804744,0.0015107068],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992943,0.00011343135,0.00012159353,0.00020236701,0.00009718671,0.00017116245],"domain_scores_gemma":[0.9997092,0.0000059606223,0.000025033762,0.00021013837,0.000022178714,0.000027500346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014583631,0.00009002398,0.00007431692,0.00007034368,0.00006039966,0.00004900829,0.000112218826,0.00006892942,0.0000029285518],"category_scores_gemma":[0.000045499422,0.000071736125,0.000031350188,0.00019164232,0.00003839213,0.0000036204094,0.000049214894,0.00007756504,0.0000023374037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056621666,0.00009685455,0.00040534107,0.00002750359,0.0000076003817,0.0000073080823,0.00005363102,0.000027723163,0.9968981,0.00022730105,0.000054799428,0.0021371995],"study_design_scores_gemma":[0.0020520745,0.00029848766,0.0012256701,0.000028224276,0.0000120623245,0.0000025925135,0.00020809541,0.002435349,0.98825735,0.00029970997,0.0050246716,0.00015570788],"about_ca_topic_score_codex":0.00004826523,"about_ca_topic_score_gemma":0.000024354758,"teacher_disagreement_score":0.012672329,"about_ca_system_score_codex":0.000005604703,"about_ca_system_score_gemma":0.00004547963,"threshold_uncertainty_score":0.29253143},"labels":[],"label_agreement":null},{"id":"W4411058935","doi":"10.1016/j.molcel.2025.05.012","title":"Off-pore Nup98 condensates mobilize heterochromatic breaks and exclude Rad51","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of General Medical Sciences; Directorate for Mathematical and Physical Sciences; Directorate for Biological Sciences; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Grantová Agentura České Republiky; National Cancer Institute; National Science Foundation; National Institutes of Health; National Institute of Environmental Health Sciences; American Cancer Society","keywords":"Biology; Heterochromatin; RAD51; Cell biology; Nuclear pore; Computational biology; Genetics; DNA; DNA damage; Chromatin; Cytoplasm","score_opus":0.003585477934198656,"score_gpt":0.2308559897424392,"score_spread":0.22727051180824054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411058935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9764211,0.01066904,0.0035417061,0.00021406841,0.00008385797,0.00021464028,0.000010391629,0.000017013805,0.008828157],"genre_scores_gemma":[0.99442947,0.00035184028,0.00059210684,0.000741182,0.00002497343,0.000052872983,0.000083870575,0.000018829132,0.0037048678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914175,0.000044962635,0.00017809152,0.0003612669,0.000083008475,0.00019091305],"domain_scores_gemma":[0.9993778,0.0000074392788,0.00005103229,0.00045072616,0.000051835315,0.00006118279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007452141,0.00015518528,0.00013992177,0.00004515595,0.000075407814,0.000042267613,0.0001530775,0.0001267499,0.00002751589],"category_scores_gemma":[0.000017115752,0.00015185133,0.00007452376,0.00008753305,0.00009591789,0.0000026732114,0.00009987048,0.00006734673,0.000009088316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000150114365,0.00004843853,0.0002791299,0.00006045394,0.00003823927,0.000009092267,0.000024220617,0.000059602873,0.994213,0.00015170204,0.0016451929,0.0034559486],"study_design_scores_gemma":[0.0007234026,0.00008711199,0.0009701472,0.000025597057,0.00004662154,0.000012009723,0.00007991856,0.00033943306,0.9434369,0.00041568084,0.053645235,0.00021793711],"about_ca_topic_score_codex":0.000013452195,"about_ca_topic_score_gemma":0.000006710731,"teacher_disagreement_score":0.05200004,"about_ca_system_score_codex":0.000012374747,"about_ca_system_score_gemma":0.000056309284,"threshold_uncertainty_score":0.6192317},"labels":[],"label_agreement":null},{"id":"W4411509169","doi":"10.1016/j.molcel.2026.03.018","title":"Condition-dependent amorphous protein agglomerates control cytoplasmic rheology","year":2025,"lang":"en","type":"preprint","venue":"Molecular Cell","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Polytechnique Montréal","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Cytoplasm; Rheology; Diffusion; Agglomerate; Biophysics; Escherichia coli; Particle (ecology); Viscoelasticity; Chemistry; Biochemistry; Biology; Materials science; Gene; Physics","score_opus":0.002769482530205511,"score_gpt":0.21567827333152548,"score_spread":0.21290879080131997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411509169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8105806,0.006828503,0.16304001,0.00035548987,0.00097647426,0.0026166735,0.001167356,0.00010179397,0.014333106],"genre_scores_gemma":[0.98610747,0.00013563188,0.002100627,0.0013291513,0.00018074129,0.0004812644,0.0019546465,0.000059481892,0.007651014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974361,0.00023978272,0.0004669763,0.0010897369,0.00024803012,0.0005193699],"domain_scores_gemma":[0.9982268,0.000012829815,0.00030354678,0.0011260066,0.00019561191,0.00013516925],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001673397,0.00058962964,0.0005431629,0.00014051757,0.000103087965,0.00007545425,0.0006515046,0.0011292732,0.000065356035],"category_scores_gemma":[0.00006344736,0.00062499975,0.00034739883,0.000081508355,0.00016205855,0.0000023211685,0.0008028064,0.000674538,0.00003897135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018437127,0.00009946534,0.00025087854,0.00034733317,0.0003016482,0.00020421992,0.000017063594,0.0052734646,0.9909612,0.0010204207,0.0008271442,0.0005127839],"study_design_scores_gemma":[0.0018862264,0.00025729876,0.00006854918,0.00009282367,0.00018543885,0.000029306335,0.000012416734,0.0008516328,0.9831882,0.0051614093,0.0074222805,0.0008443904],"about_ca_topic_score_codex":0.000076869335,"about_ca_topic_score_gemma":0.000036472684,"teacher_disagreement_score":0.17552686,"about_ca_system_score_codex":0.000056700213,"about_ca_system_score_gemma":0.00049560907,"threshold_uncertainty_score":0.99962014},"labels":[],"label_agreement":null},{"id":"W4412630652","doi":"10.1016/j.molcel.2025.07.002","title":"Human mitochondrial RNA polymerase structures reveal transcription start site and slippage mechanism","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Fonds Wetenschappelijk Onderzoek; Canada Excellence Research Chairs, Government of Canada; Flanders Make","keywords":"Biology; RNA polymerase II; Polymerase; Transcription (linguistics); Slippage; RNA polymerase; Mechanism (biology); Transcription factor II D; Cell biology; RNA polymerase I; Transcription preinitiation complex; Genetics; Computational biology; RNA; Gene; Gene expression; Promoter; Physics","score_opus":0.005455512588309528,"score_gpt":0.2299661707048505,"score_spread":0.22451065811654097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412630652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9753495,0.0022329644,0.018440362,0.00018322493,0.00022880315,0.00022105614,0.000036608544,0.0000145941185,0.0032929014],"genre_scores_gemma":[0.9942327,0.00006984315,0.0009146355,0.00059870974,0.00009742469,0.00002794049,0.00014751192,0.000017846658,0.0038933917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991231,0.000070322465,0.00016293062,0.00036915403,0.00009554456,0.00017895618],"domain_scores_gemma":[0.999514,0.0000018351794,0.000043583594,0.00034064057,0.000038119466,0.000061808445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055816192,0.0001505298,0.00011247824,0.000058298192,0.00015934266,0.000046176698,0.00011226771,0.00014218836,0.000031609343],"category_scores_gemma":[0.0000058116284,0.00015487205,0.000080975515,0.00007387318,0.000046875397,0.0000037589646,0.000040698964,0.00010330591,0.000002602461],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030893556,0.000026942751,0.000017735341,0.00002462544,0.000024219358,0.0000052277064,0.000034985518,0.000013724546,0.99505335,0.0022754755,0.0015489502,0.00094387523],"study_design_scores_gemma":[0.00076237204,0.000094188916,0.00026910825,0.000007704935,0.00004535477,0.0000017045636,0.0000359565,0.000018770546,0.9838683,0.0015325819,0.0132010095,0.0001629292],"about_ca_topic_score_codex":0.00005374245,"about_ca_topic_score_gemma":0.00002103163,"teacher_disagreement_score":0.01888321,"about_ca_system_score_codex":0.000012153851,"about_ca_system_score_gemma":0.00004112459,"threshold_uncertainty_score":0.6315499},"labels":[],"label_agreement":null},{"id":"W4412790530","doi":"10.1016/j.molcel.2025.07.003","title":"PALB2 and 53BP1 govern post-resection homologous recombination DNA repair","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital de l'Enfant-Jésus","funders":"National Institute of Environmental Health Sciences; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Canada Research Chairs; National Institute of General Medical Sciences; Foundation for California Community Colleges","keywords":"RAD51; Biology; Homologous recombination; DNA repair; DNA damage; Cell biology; DNA; Chromatin; Molecular biology; Genetics","score_opus":0.002616584817481756,"score_gpt":0.20613468995676326,"score_spread":0.2035181051392815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412790530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97909254,0.0011523961,0.0049312953,0.00023037606,0.0003282202,0.00026692278,0.00000828538,0.00007211491,0.013917879],"genre_scores_gemma":[0.99101835,0.00009644578,0.0011857689,0.0007298211,0.000030561572,0.000031145126,0.00010546809,0.000024089415,0.006778333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989387,0.00010080403,0.00016804827,0.00046319584,0.0001184661,0.00021082927],"domain_scores_gemma":[0.9993633,0.000009207757,0.00006118412,0.00040940792,0.00010148437,0.00005538405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018539255,0.00015885671,0.00012041888,0.0000707881,0.00006790288,0.000027814162,0.00011949528,0.00021792717,0.000015247097],"category_scores_gemma":[0.00010381984,0.00017403065,0.00011462429,0.00011904263,0.000041059902,0.0000042651013,0.00016520426,0.000095846604,0.000013852012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006473036,0.000076536344,0.00025035176,0.00004668752,0.000040534145,0.000023569752,0.000019235624,0.000010117744,0.99502134,0.00055069476,0.0012364927,0.0026597264],"study_design_scores_gemma":[0.00064164907,0.00045264277,0.000768806,0.000012894872,0.000036377856,0.000014305414,0.000043860055,0.00019363902,0.9776656,0.0008541297,0.01913444,0.00018165608],"about_ca_topic_score_codex":0.00003741474,"about_ca_topic_score_gemma":0.00003071576,"teacher_disagreement_score":0.017897947,"about_ca_system_score_codex":0.00003485107,"about_ca_system_score_gemma":0.000057085424,"threshold_uncertainty_score":0.7096764},"labels":[],"label_agreement":null},{"id":"W4413141020","doi":"10.1016/j.molcel.2025.07.013","title":"Ubiquitination of the histone variant mH2A1.2 prevents toxic RAD18 accumulation at a subset of genomic loci upon replication stress","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université Laval","funders":"European Research Council; Université Laval; Fonds de recherche du Québec; Fonds de Recherche du Québec - Santé; Oncode Institute; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Canadian Institutes of Health Research; National Cancer Institute; KWF Kankerbestrijding; Natural Sciences and Engineering Research Council of Canada; Fondation Jean-Louis Lévesque; Netherlands Institute of Government; Cancer Prevention and Research Institute of Texas","keywords":"Biology; Ubiquitin; DNA repair; Histone; DNA damage; Telomere; Cell biology; Genetics; Postreplication repair; Holliday junction; DNA replication; DNA methylation; DNA; DNA mismatch repair; Gene","score_opus":0.008873295629821358,"score_gpt":0.2661165570539666,"score_spread":0.2572432614241452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413141020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9832039,0.0005005722,0.014363938,0.00007623752,0.0001001143,0.00046990282,0.000034537934,0.000009002178,0.0012417837],"genre_scores_gemma":[0.9968031,0.000027287399,0.0007193402,0.00007915785,0.000012677246,0.000027356524,0.00027303005,0.000017959168,0.0020400798],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887234,0.00014882683,0.00032131057,0.00035721733,0.00016820691,0.00013212551],"domain_scores_gemma":[0.99863356,0.000008374428,0.0002954226,0.0009344457,0.00010410302,0.000024081153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023642115,0.00012248819,0.00013974487,0.000054333577,0.000047361027,0.000005410849,0.00028055825,0.00014766006,0.000016513743],"category_scores_gemma":[0.00006391108,0.000115507726,0.00013290561,0.00013056437,0.00003680228,0.0000034590637,0.0002332983,0.00005086976,0.000002422774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005719454,0.000110467896,0.0003889774,0.000100999285,0.000031922227,9.229403e-7,0.000039024108,0.0008401388,0.9971803,0.0003760194,0.00015141834,0.0007226182],"study_design_scores_gemma":[0.00046805348,0.000078412566,0.0028177467,0.000028735532,0.00005613333,0.0000015523277,0.000012485338,0.0009379853,0.9942656,0.0002520033,0.0009887805,0.00009251823],"about_ca_topic_score_codex":0.00002552187,"about_ca_topic_score_gemma":0.000017452385,"teacher_disagreement_score":0.0136445975,"about_ca_system_score_codex":0.000082986924,"about_ca_system_score_gemma":0.00007768476,"threshold_uncertainty_score":0.47102684},"labels":[],"label_agreement":null},{"id":"W4414380518","doi":"10.1016/j.molcel.2025.08.021","title":"mTOR inhibition reprograms cellular lipid homeostasis by inducing alternative lipid uptake and promoting cholesterol transport","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Cancer, Lipids, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; Cancer Center, University of Illinois at Chicago; National Cancer Institute; National Institutes of Health; LAM Foundation; University of Illinois at Chicago; Georgia Technology's Systems Mass Spectrometry Core Facility, Parker H. Petit Institute for Bioengineering and Bioscience","keywords":"PI3K/AKT/mTOR pathway; Lipid metabolism; Mechanistic target of rapamycin; mTORC2; Sirolimus; Lipid raft; Cell growth; Cholesterol; RPTOR; Signal transduction","score_opus":0.006155484737617876,"score_gpt":0.22348012539742057,"score_spread":0.2173246406598027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414380518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818526,0.004900509,0.008853199,0.00019200853,0.0019055003,0.0006405627,0.000053710337,0.00003939515,0.0015625143],"genre_scores_gemma":[0.99446166,0.00081070594,0.0006420019,0.0006920661,0.0019511748,0.000114651564,0.0004105485,0.000053699332,0.00086350914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980681,0.00009217725,0.00039306155,0.0008384751,0.00020060524,0.0004075915],"domain_scores_gemma":[0.9991313,0.000006886755,0.0001471644,0.00047471994,0.00009842375,0.00014150822],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003079724,0.00031563922,0.00030387734,0.00009271831,0.00012870827,0.00006501228,0.00015674597,0.0002445519,0.000009840183],"category_scores_gemma":[0.000037891292,0.00033718484,0.0001626213,0.00019325646,0.00010010853,0.000012672754,0.00009882898,0.00021420265,0.0000036630609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046121404,0.00012307354,0.0004507258,0.00014000044,0.00006691174,0.0000019197496,0.0002946968,0.000014333018,0.9610269,0.000019679095,0.0018615499,0.0359541],"study_design_scores_gemma":[0.00095184636,0.00011453568,0.00023803704,0.00005904067,0.00006561925,0.0000035154785,0.00008711912,0.000030831074,0.67393607,0.000020962154,0.32425553,0.00023691476],"about_ca_topic_score_codex":0.000120324425,"about_ca_topic_score_gemma":0.000022637003,"teacher_disagreement_score":0.32239398,"about_ca_system_score_codex":0.000026921605,"about_ca_system_score_gemma":0.000078712874,"threshold_uncertainty_score":0.99990803},"labels":[],"label_agreement":null},{"id":"W4414802876","doi":"10.1016/j.molcel.2025.08.029","title":"A needed nomenclature for nucleosomes","year":2025,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Princess Margaret Cancer Centre","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"Nucleosome; Histone; Chromatin; Context (archaeology); Function (biology); Genome; Nomenclature; Histone code","score_opus":0.007085951623157156,"score_gpt":0.2604181434180623,"score_spread":0.2533321917949051,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414802876","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007657215,0.98800457,0.005025515,0.000017473529,0.0002683748,0.0010460907,0.00025996013,0.000015599351,0.0052858572],"genre_scores_gemma":[0.000022364036,0.98574215,0.00519503,0.00026101276,0.00013674404,0.00025131457,0.002140852,0.000094926676,0.006155595],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985519,0.000050997467,0.00036825857,0.0005998018,0.0000883528,0.00034071074],"domain_scores_gemma":[0.99892175,0.00002058363,0.00020499877,0.0007092201,0.00006278271,0.00008069208],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009104765,0.000452549,0.0007882141,0.00010245997,0.00007131753,0.000054266657,0.00050462986,0.0006914432,0.000009301151],"category_scores_gemma":[0.000035329842,0.00042832133,0.000872051,0.00013733857,0.00003154246,8.140965e-7,0.00023985846,0.000170257,0.00001412999],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003805385,0.00032300863,8.9651604e-7,0.094696425,0.0010260603,0.000050345516,0.00003882112,0.000030986164,0.01598877,0.0014813385,0.033636194,0.8526891],"study_design_scores_gemma":[0.00026094783,0.00009371767,3.3764078e-8,0.000827783,0.00042476828,0.000006237607,0.000009594893,0.000013644909,0.00094006205,0.00014724983,0.99684674,0.00042922134],"about_ca_topic_score_codex":0.0000029544267,"about_ca_topic_score_gemma":0.0000023888563,"teacher_disagreement_score":0.9632105,"about_ca_system_score_codex":0.00003093001,"about_ca_system_score_gemma":0.00035656552,"threshold_uncertainty_score":0.99981683},"labels":[],"label_agreement":null},{"id":"W4415256079","doi":"10.1016/j.molcel.2025.09.016","title":"Metabolites in the extracellular tumor microenvironment and the shaping of macrophage function","year":2025,"lang":"en","type":"review","venue":"Molecular Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Cancer Institute; Canadian Institutes of Health Research; Canada First Research Excellence Fund","keywords":"Tumor microenvironment; Crosstalk; Macrophage; Reprogramming; Immune system; Innate immune system; Function (biology); Metabolite; Phenotype; Cancer cell","score_opus":0.010468840531978376,"score_gpt":0.23928211610251587,"score_spread":0.2288132755705375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415256079","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00065598945,0.99660754,0.0007001196,0.000033133427,0.00032773748,0.0009740933,0.000036552497,0.0000029255416,0.0006619178],"genre_scores_gemma":[0.0012923402,0.99696773,0.00011635587,0.00027872337,0.00020056318,0.00017752427,0.00011823645,0.000032127657,0.00081642496],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980857,0.000539543,0.0004773401,0.0004670737,0.00017815438,0.00025220157],"domain_scores_gemma":[0.9989536,0.000052653475,0.00026330212,0.0006787783,0.000018234567,0.000033474465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065492955,0.00034485612,0.0007926877,0.000084886655,0.000059743827,0.000033111235,0.0004006678,0.00018544686,0.000012369948],"category_scores_gemma":[0.000044421864,0.00020871924,0.00047254632,0.00017572258,0.00021091726,0.0000020855682,0.0002015127,0.00026633675,0.0000028101797],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019522513,0.0002866914,0.000005349957,0.02018024,0.00054399605,0.000040857216,0.00023961106,0.00003162646,0.1670281,0.0020324732,0.0014605521,0.80795527],"study_design_scores_gemma":[0.0006758933,0.000029818304,0.000005007143,0.00043776358,0.0009215006,0.000015332454,0.000041669926,0.0000025802376,0.006155373,0.000040496212,0.9914846,0.00018997339],"about_ca_topic_score_codex":0.000023234048,"about_ca_topic_score_gemma":0.000005340617,"teacher_disagreement_score":0.99002403,"about_ca_system_score_codex":0.000011470184,"about_ca_system_score_gemma":0.000108162996,"threshold_uncertainty_score":0.8511324},"labels":[],"label_agreement":null},{"id":"W4416019478","doi":"10.1016/j.molcel.2025.10.013","title":"Alternative start codon selection shapes mitochondrial function and rare human diseases","year":2025,"lang":"en","type":"article","venue":"Molecular Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Chan Zuckerberg Initiative; National Institutes of Health; National Science Foundation","keywords":"Alternative splicing; Gene isoform; Phenotype; Function (biology); Allele; Nonsense-mediated decay; Frameshift mutation; Stop codon; Mitochondrion","score_opus":0.00660322569764047,"score_gpt":0.23435752964119608,"score_spread":0.2277543039435556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416019478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8247639,0.0016181192,0.16267776,0.00015858287,0.001440938,0.00054251764,0.000041801137,0.00005902124,0.008697383],"genre_scores_gemma":[0.993019,0.00005141292,0.00039686693,0.0009657334,0.00037631506,0.000051266077,0.00029740838,0.000021670963,0.004820324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998969,0.00013065066,0.00016524176,0.00045694987,0.00009491589,0.00018320291],"domain_scores_gemma":[0.9996177,0.000008728535,0.00005989413,0.0001583195,0.00008281648,0.00007257188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003917748,0.00017035789,0.0001393249,0.000089950016,0.00015636111,0.000040303432,0.00008336278,0.00015961456,0.00008476833],"category_scores_gemma":[0.0000380908,0.00017638344,0.00007310042,0.00010983087,0.00006259529,0.000005176869,0.000079611564,0.00008796812,0.0000096571175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027845922,0.00006741372,0.0013289832,0.00002665724,0.000047967846,0.0000058835853,0.000012035835,0.00013686737,0.99078923,0.00077648845,0.006042288,0.00048774068],"study_design_scores_gemma":[0.002754219,0.0012174518,0.0024743583,0.000023347344,0.00019426321,0.000008958326,0.000060652437,0.00028163783,0.82912904,0.0027797327,0.16066389,0.0004124693],"about_ca_topic_score_codex":0.000029716788,"about_ca_topic_score_gemma":0.000044836503,"teacher_disagreement_score":0.16825514,"about_ca_system_score_codex":0.000014988648,"about_ca_system_score_gemma":0.000043899523,"threshold_uncertainty_score":0.7192708},"labels":[],"label_agreement":null},{"id":"W4417482342","doi":"10.1016/j.molcel.2025.11.024","title":"A molecular trio anchors RNAs on the cell surface","year":2025,"lang":"en","type":"letter","venue":"Molecular Cell","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chinese Academy of Sciences; Canadian Anesthesiologists' Society","keywords":"RNA; Cell; Mechanism (biology); RNA-binding protein; Heparan sulfate; Molecular cell biology; DNA; Long non-coding RNA","score_opus":0.01553111813649034,"score_gpt":0.2653029488596259,"score_spread":0.24977183072313558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417482342","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028504567,0.003812963,0.0015257811,0.66402024,0.00047963872,0.0033075812,0.000071778944,0.00020105428,0.2980764],"genre_scores_gemma":[0.0198182,0.00034286926,0.0007286355,0.8343137,0.00052921503,0.0001352822,0.0005821545,0.00036220485,0.14318773],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99292547,0.00085777906,0.00072603003,0.0015602421,0.0025185712,0.0014118911],"domain_scores_gemma":[0.99535716,0.00053626054,0.000269465,0.0031726023,0.00035861548,0.00030592992],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.000566115,0.0010427395,0.0010929565,0.00051763275,0.00019599553,0.00017978442,0.0012549334,0.0015368572,0.0011042528],"category_scores_gemma":[0.00025968289,0.0007912603,0.0011079056,0.0010646498,0.00024680895,0.000025453886,0.00050964963,0.0065313377,0.0017757528],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010348731,0.00019678549,0.000008607789,0.0008183613,0.00012848215,0.018597247,0.00003724639,0.00011507036,0.2066274,0.00003247197,0.77307767,0.0002571645],"study_design_scores_gemma":[0.00094330986,0.00030089516,0.0000043943887,0.00023891228,0.00023620267,0.00001699969,0.000016477292,0.00012566108,0.41457233,0.00006036248,0.58306926,0.00041517193],"about_ca_topic_score_codex":0.00009027715,"about_ca_topic_score_gemma":0.0000012275949,"teacher_disagreement_score":0.20794493,"about_ca_system_score_codex":0.00041670018,"about_ca_system_score_gemma":0.00094122207,"threshold_uncertainty_score":0.99980885},"labels":[],"label_agreement":null}]}