{"meta":{"query_hash":"e4ccf1c4d3a5","filters":{"venue":"Organogenesis"},"cohort_total":14,"direct_labels_cover":0,"predictions_cover":14,"exported":14,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/e4ccf1c4d3a5","api":"https://metacan.xera.ac/api/v1/cohort?venue=Organogenesis"},"results":[{"id":"W1964745697","doi":"10.4161/org.4.3.6504","title":"Blood pressure follows the kidney","year":2008,"lang":"en","type":"article","venue":"Organogenesis","topic":"Birth, Development, and Health","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Fetal programming; Blood pressure; Medicine; Epidemiology; Kidney; Bioinformatics; Kidney development; Intensive care medicine; Fetus; Pregnancy; Biology; Internal medicine; Genetics","score_opus":0.02207350180925314,"score_gpt":0.25283930205608424,"score_spread":0.2307658002468311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964745697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92491966,0.005872863,0.00012675796,0.021431139,0.0005343622,0.0008897681,0.000028708315,0.00029052148,0.045906223],"genre_scores_gemma":[0.9581704,0.024540516,0.0010589715,0.009896854,0.00033175442,0.000026120855,0.000016889453,0.00004295887,0.0059155184],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99899024,0.00004366264,0.0001885729,0.00022153798,0.00026959478,0.00028638603],"domain_scores_gemma":[0.99917746,0.000032047283,0.000052502997,0.0003917434,0.000070643844,0.0002756346],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017752123,0.00013184699,0.0002161155,0.00004698256,0.00033717006,0.0000069348853,0.000125984,0.00009926552,0.00092602917],"category_scores_gemma":[0.00011934389,0.00008434333,0.00007529474,0.0002435931,0.00008988697,0.00003121483,0.000037357415,0.00011538283,0.00021941091],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018513958,0.00077824225,0.5694767,0.0005500151,0.0014896059,0.0004355737,0.004451897,0.0000012728207,0.10114602,0.009158639,0.3082771,0.0040497505],"study_design_scores_gemma":[0.0028857798,0.00017273014,0.36373284,0.000083529754,0.0013387639,0.0011718234,0.00014181987,0.000012502534,0.19660002,0.00050804066,0.43299967,0.00035248205],"about_ca_topic_score_codex":0.00005486144,"about_ca_topic_score_gemma":0.000008166344,"teacher_disagreement_score":0.2057439,"about_ca_system_score_codex":0.000012844417,"about_ca_system_score_gemma":0.0006709461,"threshold_uncertainty_score":0.99998724},"labels":[],"label_agreement":null},{"id":"W1987486932","doi":"10.4161/org.4.4.7082","title":"Adipose tissue engineering with cells in engineered matrices","year":2008,"lang":"en","type":"article","venue":"Organogenesis","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Health Sciences Centre; Queen's University","funders":"","keywords":"Adipose tissue; Tissue engineering; Biomedical engineering; Biology; Medicine; Endocrinology","score_opus":0.015712412160232735,"score_gpt":0.23682603168648517,"score_spread":0.22111361952625244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987486932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99651104,0.0012996348,0.00040303354,0.00014310384,0.000050335664,0.00036156474,0.0000035348978,0.00009058415,0.0011371786],"genre_scores_gemma":[0.99147487,0.0003838986,0.004471809,0.000030457659,0.000102647726,0.000023809047,0.000006318013,0.00006025135,0.003445934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870515,0.000018793668,0.00019607267,0.00026750145,0.0004148405,0.0003976679],"domain_scores_gemma":[0.9993022,0.0000821088,0.000025228996,0.00030309765,0.00006899878,0.00021834095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012702853,0.0001681227,0.000291422,0.0003199829,0.000037601687,0.000009235555,0.000117789314,0.00008892521,0.00067345146],"category_scores_gemma":[0.000053943382,0.0001377941,0.000029855582,0.00085858366,0.000028883904,0.000060051127,0.00003709094,0.00014213866,0.00025960713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009762039,0.00011049172,0.02296964,0.00022602969,0.00004662269,0.0018427601,0.00027876376,0.00056370744,0.97206134,0.000008857404,0.0004164811,0.0013776878],"study_design_scores_gemma":[0.000898242,0.00021158245,0.03882111,0.00008115504,0.000028685925,0.00036929475,0.000024603754,0.00047688995,0.9519303,3.165566e-7,0.0069792583,0.0001785974],"about_ca_topic_score_codex":0.00012503858,"about_ca_topic_score_gemma":0.0000126945315,"teacher_disagreement_score":0.020131074,"about_ca_system_score_codex":0.00010768673,"about_ca_system_score_gemma":0.00013064149,"threshold_uncertainty_score":0.7373821},"labels":[],"label_agreement":null},{"id":"W2017205529","doi":"10.4161/org.6.3.12125","title":"The relationship between nephron number, kidney size and body weight in two inbred mouse strains","year":2010,"lang":"en","type":"article","venue":"Organogenesis","topic":"Birth, Development, and Health","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Nephron; Inbred strain; Kidney; Body weight; Biology; Anatomy; Endocrinology; Genetics; Gene","score_opus":0.023705289053832165,"score_gpt":0.3063655091109379,"score_spread":0.2826602200571057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017205529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893633,0.000064550506,0.000017414826,0.007648282,0.00015729657,0.00032386504,0.000019938898,0.00005849903,0.0023468349],"genre_scores_gemma":[0.9940641,0.0017731965,0.0018855357,0.0010388236,0.00032327502,0.000017299244,0.000030799387,0.000038148002,0.0008288088],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988206,0.000064509826,0.00032064322,0.00025297902,0.00020470578,0.00033654086],"domain_scores_gemma":[0.9987633,0.00042538106,0.000080331825,0.00032827063,0.00005122712,0.000351471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046848613,0.00015273923,0.00023248451,0.000058861187,0.00030417324,0.000032163603,0.000103283404,0.00013632943,0.00022605306],"category_scores_gemma":[0.0008395728,0.000114399605,0.000031215255,0.00028361203,0.00010845058,0.000069549424,0.000042518037,0.00036881567,0.00007735555],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024360153,0.00003674362,0.962435,0.000043281252,0.000021210974,0.000005943678,0.00044446456,1.1224219e-8,0.027701667,0.0071267392,0.0013502848,0.0008102847],"study_design_scores_gemma":[0.0015449309,0.000023324295,0.9838989,0.000024934767,0.00004170816,0.000019007864,0.0000786539,0.000003612041,0.0061795157,0.0028181742,0.0052366396,0.00013059129],"about_ca_topic_score_codex":0.00021300453,"about_ca_topic_score_gemma":0.00086071144,"teacher_disagreement_score":0.02152215,"about_ca_system_score_codex":0.0000636855,"about_ca_system_score_gemma":0.0005423925,"threshold_uncertainty_score":0.46650806},"labels":[],"label_agreement":null},{"id":"W2036540051","doi":"10.4161/15476278.2014.970089","title":"Age associated communication between cells and matrix: a potential impact on stem cell-based tissue regeneration strategies","year":2014,"lang":"en","type":"review","venue":"Organogenesis","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Society for Exercise Physiology","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; AO Foundation","keywords":"Decellularization; Extracellular matrix; Cell biology; Mesenchymal stem cell; Stem cell; Regeneration (biology); Regenerative medicine; Biology; Tissue engineering; Immunology; Chondrogenesis; Chemistry; Genetics","score_opus":0.024957581000128452,"score_gpt":0.3244726846885928,"score_spread":0.29951510368846435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036540051","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004850829,0.98967934,0.0038339077,0.000097497934,0.00020579956,0.00096061954,0.00013621534,0.00017634877,0.000059429796],"genre_scores_gemma":[0.06430098,0.9265298,0.0005239768,0.000013318813,0.0007387039,0.000057063473,0.002289377,0.00019392544,0.0053528454],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976538,0.00048422228,0.0006522937,0.00048371594,0.00039346024,0.0003324981],"domain_scores_gemma":[0.9982468,0.0002332163,0.00042248055,0.0007417051,0.00011012266,0.00024570874],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00044739575,0.0006591714,0.0021539836,0.00037167448,0.00018072319,0.000095170464,0.00018432592,0.0005932487,0.00006911745],"category_scores_gemma":[0.000023422806,0.0004635509,0.00028504897,0.0003960949,0.00009183861,0.00004485688,0.000041165138,0.0004298517,0.000057180423],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006405357,0.00043908955,0.00006569142,0.029087361,0.0016582882,0.00024115072,0.00028618774,0.002843049,0.020576367,0.00007189489,0.0055754357,0.93909144],"study_design_scores_gemma":[0.0036175074,0.0030379556,0.00054228946,0.025211222,0.01299323,0.000088353474,0.000091520014,0.00061520666,0.046068154,0.00000701694,0.90575963,0.0019679223],"about_ca_topic_score_codex":0.00004815111,"about_ca_topic_score_gemma":0.0000038367316,"teacher_disagreement_score":0.93712354,"about_ca_system_score_codex":0.00030374114,"about_ca_system_score_gemma":0.0003586176,"threshold_uncertainty_score":0.9997816},"labels":[],"label_agreement":null},{"id":"W2042388748","doi":"10.4161/org.5.2.9128","title":"Assuring consumer safety without animals","year":2009,"lang":"en","type":"article","venue":"Organogenesis","topic":"Animal testing and alternatives","field":"Veterinary","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Society for the Study of Architecture in Canada","funders":"","keywords":"Consumer safety; Scope (computer science); Risk analysis (engineering); Legislation; Directive; European union; Cosmetics; Business; Variety (cybernetics); Emerging technologies; Biotechnology; Computer science; Medicine; Biology","score_opus":0.12052834427122712,"score_gpt":0.37583976439549865,"score_spread":0.25531142012427155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042388748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98104095,0.00062142464,0.00045931272,0.00022332791,0.00007309827,0.00008846809,0.000012237067,0.00032551048,0.017155683],"genre_scores_gemma":[0.99509317,0.000053190084,0.0033137884,0.00022276962,0.00017229911,0.00000245836,0.0000027778376,0.00002862089,0.0011109399],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998971,0.00006600743,0.00021600004,0.00030510136,0.00016414448,0.00027774455],"domain_scores_gemma":[0.9994594,0.00007962735,0.0000836741,0.00023437393,0.00005523798,0.0000876866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016843696,0.0001714564,0.0002126099,0.000056830624,0.00017042391,0.000038378825,0.0001792375,0.000053123185,0.0006077147],"category_scores_gemma":[0.00011790222,0.00015728446,0.00006512113,0.00014928919,0.00004003517,0.000083638486,0.000040701805,0.000077547906,0.00047292342],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041156745,0.000100176476,0.10248459,0.00001592299,0.00006717112,0.00018072937,0.00027157593,0.000004866254,0.8575036,0.0006903509,0.00042470734,0.037844747],"study_design_scores_gemma":[0.00089947536,0.001347185,0.813564,0.00014299017,0.00009328279,0.000416435,0.00017484739,0.00022803755,0.16447617,0.0006091784,0.017264226,0.00078415434],"about_ca_topic_score_codex":0.000025799105,"about_ca_topic_score_gemma":0.0000013033266,"teacher_disagreement_score":0.7110794,"about_ca_system_score_codex":0.000035320132,"about_ca_system_score_gemma":0.00002476902,"threshold_uncertainty_score":0.665405},"labels":[],"label_agreement":null},{"id":"W2042830693","doi":"10.4161/org.5.4.9632","title":"Metakaryotic stem cell lineages in organogenesis of humans and other metazoans","year":2009,"lang":"en","type":"article","venue":"Organogenesis","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Universiteit Leiden","keywords":"Organogenesis; Biology; Stem cell; Evolutionary biology; Anatomy; Cell biology; Genetics; Gene","score_opus":0.014761803250728974,"score_gpt":0.25039971099705394,"score_spread":0.23563790774632495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042830693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927467,0.0055179764,0.00030336186,0.00012891059,0.00003313726,0.00022878344,0.000029067443,0.000012390365,0.0009996538],"genre_scores_gemma":[0.9958228,0.00076763675,0.0007019917,0.00020428633,0.000058201444,0.000007964334,0.00001357556,0.00004185483,0.0023816957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845487,0.00014043682,0.00035122596,0.00047611882,0.00022888395,0.00034847122],"domain_scores_gemma":[0.99921423,0.00002477363,0.0000977675,0.00047898616,0.0000779251,0.00010634128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003204154,0.00022331462,0.00033224808,0.00018089867,0.000051593513,0.000018578352,0.0002942099,0.00017321158,0.00008039632],"category_scores_gemma":[0.000020839376,0.00020905778,0.000094594005,0.00032643563,0.00007966355,0.000005691736,0.0001026617,0.00006487218,0.000014784127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046417044,0.00015521496,0.021794397,0.00005268057,0.000047392296,0.000008375997,0.00007709374,0.000051282335,0.97515935,0.000012762979,0.00012881056,0.0024662472],"study_design_scores_gemma":[0.0005220042,0.00023658773,0.025934238,0.000011691177,0.00005410812,0.000007734066,0.00010019973,0.000023058345,0.97086847,0.000014515413,0.0020161776,0.00021119676],"about_ca_topic_score_codex":0.00004643819,"about_ca_topic_score_gemma":0.000053188818,"teacher_disagreement_score":0.0047503393,"about_ca_system_score_codex":0.000016599657,"about_ca_system_score_gemma":0.00008233792,"threshold_uncertainty_score":0.85251284},"labels":[],"label_agreement":null},{"id":"W2071749299","doi":"10.4161/org.6.4.12393","title":"Human umbilical cord perivascular cells (HUCPVC)","year":2010,"lang":"en","type":"article","venue":"Organogenesis","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Umbilical cord; Wound healing; Fibrin; Medicine; Mesenchymal stem cell; Population; Fibrin glue; Pathology; Stem cell; Bone marrow; Cord lining; Surgery; Andrology; Anatomy; Chemistry; Biology; Adult stem cell; Immunology; Endothelial stem cell; In vitro; Cell biology","score_opus":0.022301113399588898,"score_gpt":0.3135683204329049,"score_spread":0.291267207033316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071749299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870331,0.00009630934,0.000043417767,0.00056120387,0.00025083413,0.00042992426,0.0000037274808,0.00011674075,0.011464706],"genre_scores_gemma":[0.98296833,0.000022861914,0.0011668612,0.00023019844,0.0004605292,0.000025811947,0.000012552387,0.00007124377,0.015041615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99799055,0.00006149247,0.00026955464,0.00046832854,0.00070933724,0.00050075934],"domain_scores_gemma":[0.99829775,0.00005668984,0.000040534065,0.0009212175,0.00018073893,0.0005030943],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00041545482,0.00019450801,0.00035479487,0.00012648724,0.00019132638,0.000041239946,0.00026713585,0.00022888175,0.015439272],"category_scores_gemma":[0.00017109035,0.00016753435,0.0001894476,0.00035828305,0.000181682,0.000044647608,0.00014916458,0.00041752853,0.0016291357],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000375075,0.00017281687,0.015862498,0.000073702366,0.000047780697,0.00012724973,0.0000410539,1.8372101e-7,0.9747917,0.00013550215,0.0026019097,0.006108085],"study_design_scores_gemma":[0.0007069356,0.0002664047,0.058864187,0.000013750153,0.00007115934,0.000119704615,0.000034875146,0.000023177261,0.8767117,0.000023565877,0.062975876,0.00018861597],"about_ca_topic_score_codex":0.00013397766,"about_ca_topic_score_gemma":0.00004976654,"teacher_disagreement_score":0.098079965,"about_ca_system_score_codex":0.00005239804,"about_ca_system_score_gemma":0.00014495786,"threshold_uncertainty_score":0.9991482},"labels":[],"label_agreement":null},{"id":"W2081882129","doi":"10.4161/org.6.3.12392","title":"Development, characterization and clinical use of a biodegradable composite scaffold for bone engineering in oro-maxillo-facial surgery","year":2010,"lang":"en","type":"review","venue":"Organogenesis","topic":"Bone Tissue Engineering Materials","field":"Engineering","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Scaffold; PLGA; Biomedical engineering; Materials science; Biomaterial; Tissue engineering; Dental alveolus; Dentistry; Nanotechnology; Medicine","score_opus":0.053610844206171036,"score_gpt":0.26937123626465187,"score_spread":0.21576039205848083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081882129","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20864533,0.7838417,0.003528584,0.000002942053,0.0018881937,0.0013275418,0.00032908173,0.0004353026,0.000001304172],"genre_scores_gemma":[0.00036396724,0.9844351,0.013877557,0.0000022928339,0.00019248271,0.00015875153,0.0006064711,0.00029929797,0.00006408161],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99756217,0.00003505154,0.0015161,0.00037085888,0.00013243263,0.00038335784],"domain_scores_gemma":[0.9988961,0.0004074832,0.00022486622,0.0003151744,0.000043007476,0.00011335872],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005096536,0.0005214504,0.0022654817,0.0005481678,0.000032119817,0.0000739594,0.00013851807,0.0006385768,0.000018792902],"category_scores_gemma":[0.00016511217,0.0005489883,0.00021890947,0.0004072543,0.000027401966,0.00018548302,0.000067272034,0.00018554155,0.000008689372],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008040549,0.000041121606,0.00028827632,0.019512597,0.00018660055,0.000010801247,0.00003757578,0.000077092154,0.028332906,0.0000043629625,0.00002436134,0.9514763],"study_design_scores_gemma":[0.00021302117,0.000010005045,0.0011118315,0.0042217937,0.00026306306,0.000028957917,4.5282755e-7,0.00048013523,0.011180669,1.3925616e-7,0.9817963,0.0006936357],"about_ca_topic_score_codex":0.000007596524,"about_ca_topic_score_gemma":0.000008636203,"teacher_disagreement_score":0.98177195,"about_ca_system_score_codex":0.0000878834,"about_ca_system_score_gemma":0.00010767969,"threshold_uncertainty_score":0.99969614},"labels":[],"label_agreement":null},{"id":"W2085138801","doi":"10.4161/org.26202","title":"Somatic cell transformation into stem cell-like cells induced by different microenvironments","year":2013,"lang":"en","type":"review","venue":"Organogenesis","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biomod (Canada)","funders":"","keywords":"Reprogramming; Induced pluripotent stem cell; Somatic cell; Embryonic stem cell; Cell biology; Biology; Cell potency; Stem cell; Progenitor cell; Cellular differentiation; Cell; Cell type; Genetics","score_opus":0.017711314917537843,"score_gpt":0.2527309565816865,"score_spread":0.23501964166414863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085138801","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06299162,0.93406916,0.00031081383,0.000013848006,0.00026699068,0.0019266718,0.0001486422,0.000025044867,0.0002472355],"genre_scores_gemma":[0.004651568,0.9869128,0.00008987112,0.00003569716,0.00010093892,0.00035629334,0.0015454311,0.00021263659,0.006094806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99665344,0.00040552262,0.0008657337,0.00088667095,0.0005105666,0.0006780619],"domain_scores_gemma":[0.99825007,0.00002993222,0.00040304477,0.0009719291,0.000042870375,0.00030218123],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015484987,0.00083807163,0.0011478899,0.00016663413,0.00016974317,0.000099783596,0.00087436516,0.00086201745,0.00024695016],"category_scores_gemma":[0.0000021188735,0.0007033418,0.00052690064,0.00018200235,0.000055778753,0.000011392035,0.0003091506,0.0002703299,0.0012845786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004071114,0.00020418891,0.0000024539631,0.010057759,0.000113704584,0.000001793441,0.00004719643,5.5175906e-7,0.80721444,4.5017295e-8,0.0024504024,0.17990337],"study_design_scores_gemma":[0.00023708894,0.00009683998,0.000001152895,0.0002804394,0.00024809517,0.0000032672679,0.000025813735,0.0000023794014,0.5517869,4.7442862e-7,0.44686744,0.00045009382],"about_ca_topic_score_codex":0.000022995191,"about_ca_topic_score_gemma":0.0000026697721,"teacher_disagreement_score":0.44441703,"about_ca_system_score_codex":0.00020988008,"about_ca_system_score_gemma":0.00014816581,"threshold_uncertainty_score":0.99954176},"labels":[],"label_agreement":null},{"id":"W2090987920","doi":"10.4161/org.6.4.12650","title":"Directed assembly of cell-laden hydrogels for engineering functional tissues","year":2010,"lang":"en","type":"review","venue":"Organogenesis","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; National Institute of Biomedical Imaging and Bioengineering; Charles Stark Draper Laboratory","keywords":"Scaffold; Tissue engineering; Self-healing hydrogels; Nanotechnology; Cell encapsulation; Biomedical engineering; Materials science; Engineering","score_opus":0.03400919031635308,"score_gpt":0.29141426599127757,"score_spread":0.2574050756749245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090987920","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016839436,0.99254715,0.004685055,0.000006688864,0.0008662277,0.0006551476,0.00012287317,0.0005531942,0.00039525112],"genre_scores_gemma":[0.000112292735,0.9903182,0.007820367,0.0000017309225,0.0005322687,0.00025672466,0.00017019373,0.00027763483,0.00051063474],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99803466,0.000031580836,0.00062528567,0.00035422237,0.0004629655,0.0004913181],"domain_scores_gemma":[0.99832183,0.00081895356,0.000107649095,0.00046733834,0.00012502604,0.00015918884],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036105548,0.00043248694,0.0011994232,0.0004100598,0.000043795237,0.00003293514,0.0004998186,0.00070609135,0.00032060457],"category_scores_gemma":[0.00042837177,0.00040728503,0.00040104653,0.0006376182,0.000044573353,0.000056990386,0.00011010131,0.00044901724,0.00010640491],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000020126176,0.000036726346,0.0000024984506,0.035706814,0.00027665403,0.000004463537,0.00001395575,0.00006124678,0.02224341,0.000017200633,0.0017003743,0.9399347],"study_design_scores_gemma":[0.00009719575,0.000017709683,0.0000040545556,0.0014202365,0.00026222257,0.000009205263,7.2013495e-7,0.0006971275,0.04643663,0.0000021222374,0.95070344,0.00034931756],"about_ca_topic_score_codex":0.0000045627307,"about_ca_topic_score_gemma":0.0000012232415,"teacher_disagreement_score":0.9490031,"about_ca_system_score_codex":0.000109057066,"about_ca_system_score_gemma":0.00014324009,"threshold_uncertainty_score":0.9998379},"labels":[],"label_agreement":null},{"id":"W2091351218","doi":"10.4161/org.25412","title":"Development of three dimensional culture and expression of integrin heterodimers in human embryonic stem cells","year":2013,"lang":"en","type":"article","venue":"Organogenesis","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biomod (Canada)","funders":"","keywords":"Embryonic stem cell; Extracellular matrix; Cell biology; Stem cell; Cell culture; Integrin; Induced pluripotent stem cell; Tissue engineering; Self-healing hydrogels; Scaffold; Chemistry; Biology; Cell; Biomedical engineering; Biochemistry; Medicine; Genetics","score_opus":0.014320799437263793,"score_gpt":0.23901644202243938,"score_spread":0.22469564258517558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091351218","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99894625,0.0006612926,0.000073286414,0.000014407302,0.000025357944,0.00020738412,0.0000054208313,0.0000028698976,0.00006374649],"genre_scores_gemma":[0.9973043,0.000048748225,0.0019751664,0.00001007891,0.000011431373,0.000017434872,0.000020919771,0.000016071854,0.0005958134],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999052,0.000047159967,0.00025845377,0.0002679799,0.00019213128,0.0001823081],"domain_scores_gemma":[0.9995322,0.000007382203,0.00008755854,0.00021701217,0.00009104327,0.00006475999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013247223,0.00012468915,0.00017511318,0.00006922106,0.0000400479,0.0000061514625,0.0001607103,0.00013583318,0.00006449616],"category_scores_gemma":[0.000005226957,0.00010114456,0.000037035465,0.0000873172,0.000069882924,0.000004876585,0.00025683377,0.000058615984,0.000006475269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019134188,0.00006299702,0.0064579993,0.00007195278,0.000019547442,7.7008343e-7,0.000105301966,0.000019448646,0.9915375,0.0000014161494,0.00020747425,0.0014964534],"study_design_scores_gemma":[0.00032915125,0.00006573898,0.010824753,0.000052983807,0.0000040528544,0.000001741874,0.000090347596,0.000012354417,0.98806167,0.00000401877,0.00044752265,0.000105651234],"about_ca_topic_score_codex":0.000031716787,"about_ca_topic_score_gemma":0.000065941,"teacher_disagreement_score":0.004366754,"about_ca_system_score_codex":0.000017316792,"about_ca_system_score_gemma":0.000064036125,"threshold_uncertainty_score":0.41245553},"labels":[],"label_agreement":null},{"id":"W2091806499","doi":"10.4161/org.20261","title":"Role of the extracellular matrix in epithelial morphogenesis","year":2012,"lang":"en","type":"review","venue":"Organogenesis","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Nautical Research Society","funders":"","keywords":"Extracellular matrix; Hemidesmosome; Morphogenesis; Cell biology; Mechanotransduction; Mechanosensitive channels; Biology; Basement membrane; Epidermis (zoology); Mechanosensation; Anatomy; Adherens junction; Cell; Cadherin; Genetics","score_opus":0.01688239642007133,"score_gpt":0.27100484595819135,"score_spread":0.25412244953812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091806499","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033541888,0.995496,0.000049560986,0.0000069034077,0.0004051422,0.00041427597,0.00015714375,0.0000051631323,0.000111661626],"genre_scores_gemma":[0.0043004113,0.99249625,0.00010702539,0.000006309266,0.000347317,0.00006601207,0.0001393586,0.0000985967,0.002438741],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983864,0.00019164666,0.00056950306,0.00037401766,0.00016895082,0.0003094875],"domain_scores_gemma":[0.99863064,0.000018878025,0.00036134102,0.00086649286,0.000054594777,0.000068021545],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023311848,0.00034232435,0.0006801726,0.0001155649,0.000060580212,0.000012676929,0.0005610582,0.0004658383,0.00028358537],"category_scores_gemma":[0.000041357307,0.0002515654,0.0007076624,0.00033977235,0.000039286566,0.0000031779784,0.00029986058,0.00014860248,0.000053873042],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007009208,0.00014600641,0.000046488807,0.0010135241,0.00015771257,0.0000012764802,0.00001714328,0.0000023708824,0.6954919,0.00015297388,0.000069194495,0.3028944],"study_design_scores_gemma":[0.00007092394,0.000019486057,0.000009493186,0.00034072998,0.00042716836,0.000036724934,0.000014870087,0.000002048108,0.14902514,0.000007635805,0.8498158,0.00023001045],"about_ca_topic_score_codex":0.00005170433,"about_ca_topic_score_gemma":0.000041859177,"teacher_disagreement_score":0.8497466,"about_ca_system_score_codex":0.00004441073,"about_ca_system_score_gemma":0.0002204357,"threshold_uncertainty_score":0.9999937},"labels":[],"label_agreement":null},{"id":"W2093978807","doi":"10.4161/org.2.1.1757","title":"The Possibility of Muscle Tissue Reconstruction Using Shape Memory Alloys","year":2005,"lang":"en","type":"article","venue":"Organogenesis","topic":"3D Shape Modeling and Analysis","field":"Engineering","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hatch (Canada)","funders":"","keywords":"Anatomy; Biomedical engineering; Computer science; Medicine","score_opus":0.013975183051861868,"score_gpt":0.2246148885165448,"score_spread":0.2106397054646829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093978807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926816,0.00095034286,0.005729785,0.00006211844,0.000119098804,0.000044543103,0.000004876424,0.00010796396,0.00029962015],"genre_scores_gemma":[0.99603903,0.00014527078,0.003541886,0.000009997963,0.0001401316,0.0000018214481,0.0000014203753,0.000023853443,0.000096597876],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9993227,0.000025303529,0.0002485569,0.00013278506,0.00011528154,0.00015534225],"domain_scores_gemma":[0.9995524,0.000036939527,0.000038309012,0.00027532852,0.000057390836,0.00003960307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020201426,0.00009848024,0.00014062774,0.000047278525,0.00012911433,0.000019834124,0.00012228912,0.000059547034,0.00016241621],"category_scores_gemma":[0.00002549551,0.00007997579,0.000069301466,0.0002092562,0.00004253339,0.00007840904,0.00001820045,0.000052077685,0.000020213158],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000021815868,0.000010617553,0.0005463899,0.000019510753,0.000054857308,3.742418e-7,0.00013051885,0.14853066,0.35507524,0.0000034179084,0.000036225774,0.49559003],"study_design_scores_gemma":[0.00007888426,0.0000052905793,0.00086615194,0.000012297559,0.00006820746,0.000006900276,0.00012375867,0.6434361,0.3549192,0.00003432266,0.00033021648,0.000118682496],"about_ca_topic_score_codex":0.000047313522,"about_ca_topic_score_gemma":0.00006506561,"teacher_disagreement_score":0.49547133,"about_ca_system_score_codex":0.00006292837,"about_ca_system_score_gemma":0.000018366483,"threshold_uncertainty_score":0.3261318},"labels":[],"label_agreement":null},{"id":"W3204177662","doi":"10.1080/15476278.2021.1936785","title":"Connection of ES Cell-derived Collecting Ducts and Ureter-like Structures to Host Kidneys in Culture","year":2021,"lang":"en","type":"article","venue":"Organogenesis","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Kidney Research UK; York University","keywords":"Ureter; Connection (principal bundle); Cell culture; Anatomy; Biology; Cell biology; Medicine; Engineering; Surgery","score_opus":0.005505582950404626,"score_gpt":0.21734332860211142,"score_spread":0.2118377456517068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204177662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99710596,0.0022540234,0.00005283051,0.00012861847,0.00015477574,0.000076209275,0.000012107589,0.000004567954,0.00021093852],"genre_scores_gemma":[0.99760205,0.0009633666,0.00048802522,0.00022052876,0.000062334206,0.0000043830278,0.00002774327,0.000012942185,0.00061863655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994167,0.000037914113,0.0001224871,0.00024232965,0.00006136399,0.00011919097],"domain_scores_gemma":[0.99969363,0.000005341251,0.00004485656,0.00011069322,0.000083239254,0.000062250394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000329124,0.00009662087,0.000121695484,0.000034859877,0.000051577535,0.000012211679,0.000047853293,0.000144839,0.00002309633],"category_scores_gemma":[0.000059238406,0.00008408045,0.00003199509,0.00023418445,0.000025028554,0.0000020971663,0.00005306169,0.000044717093,7.20739e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040828756,0.000012174966,0.0026807208,0.00003918146,0.000031643467,0.000006214422,0.00031934667,0.00009688581,0.9956669,0.0000027821875,0.0007903208,0.00031295678],"study_design_scores_gemma":[0.0003559206,0.00009385968,0.005604449,0.000020204643,0.000018122644,0.000023675373,0.0005013035,0.0000029429686,0.9908186,0.000008008746,0.0024401532,0.000112750786],"about_ca_topic_score_codex":0.000043433476,"about_ca_topic_score_gemma":0.00005957518,"teacher_disagreement_score":0.0048483354,"about_ca_system_score_codex":0.000013532107,"about_ca_system_score_gemma":0.00008393465,"threshold_uncertainty_score":0.34287012},"labels":[],"label_agreement":null}]}