{"meta":{"query_hash":"d51412095f51","filters":{"venue":"Physiological and Molecular Plant Pathology"},"cohort_total":44,"direct_labels_cover":0,"predictions_cover":44,"exported":44,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/d51412095f51","api":"https://metacan.xera.ac/api/v1/cohort?venue=Physiological+and+Molecular+Plant+Pathology"},"results":[{"id":"W10389568","doi":"10.1016/j.pmpp.2005.01.003","title":"US-1 and US-8 genotypes of Phytophthora infestans differentially affect local, proximal and distal gene expression of phenylalanine ammonia-lyase and 3-hydroxy, 3-methylglutaryl CoA reductase in potato leaves","year":2004,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phytophthora infestans; Phenylalanine ammonia-lyase; Biology; Inoculation; Gene; Gene expression; Genotype; Horticulture; Phenylalanine; Genetics","score_opus":0.008078773801326317,"score_gpt":0.20035782242099043,"score_spread":0.1922790486196641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W10389568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995927,0.0029012943,0.00007898003,0.00008167587,0.000019186984,0.00023606165,0.0007347249,0.000013000636,0.000008110273],"genre_scores_gemma":[0.997419,0.0016283531,0.0006996615,0.000054423916,0.000022529037,0.000011042552,0.00016113369,0.0000017855189,0.0000020918399],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986953,0.00016827702,0.00028195663,0.00047600572,0.00010666393,0.00027178516],"domain_scores_gemma":[0.9995699,0.000092903,0.00013421001,0.00006132985,0.000022558876,0.000119122036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012660652,0.00022977703,0.00050751405,0.000026382704,0.00007839379,0.000013088046,0.00008406165,0.00017113196,0.0000052628698],"category_scores_gemma":[0.000036260346,0.00009809013,0.000045361994,0.00009507048,0.0005883761,0.000047418354,0.00017859027,0.0001422364,1.4031764e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003663205,0.00020452878,0.007130932,0.00007197587,0.000009644263,0.00040919372,0.000040481485,0.000020541947,0.9900364,0.00018608765,0.0000013009077,0.0015225931],"study_design_scores_gemma":[0.0005673156,0.0009888955,0.57972,0.00008045399,0.000022557278,0.00024804412,0.0000549701,0.00003786542,0.41711906,0.0009522326,0.000015127769,0.00019344625],"about_ca_topic_score_codex":0.000092789116,"about_ca_topic_score_gemma":0.00011349638,"teacher_disagreement_score":0.57291734,"about_ca_system_score_codex":0.000005309659,"about_ca_system_score_gemma":0.0000074959758,"threshold_uncertainty_score":0.39999995},"labels":[],"label_agreement":null},{"id":"W112839988","doi":"10.1016/j.pmpp.2012.07.004","title":"Monitoring Fusarium complex mycelia replacement by mycopathogenic Sphaerodes using alcohol percentage test, qRT-PCR and HPLC","year":2012,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Fusarium; Biology; Mycotoxin; Mycelium; Chemotype; Fungi imperfecti; High-performance liquid chromatography; Trichothecene; Botany; Microbiology; Horticulture; Chromatography; Chemistry","score_opus":0.043947117337795306,"score_gpt":0.25158866537149427,"score_spread":0.20764154803369897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W112839988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995825,0.002993829,0.000025535144,0.00012149131,0.0001371943,0.00027694882,0.000324989,0.0000651802,0.00022986796],"genre_scores_gemma":[0.99729604,0.0008205681,0.00059829216,0.0005420009,0.0003391726,0.000027281154,0.00032793402,0.000002405494,0.000046335306],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982048,0.00019256485,0.0002761404,0.00053713477,0.00015719161,0.00063215854],"domain_scores_gemma":[0.999386,0.00014025954,0.0001083115,0.000088365974,0.00002586073,0.00025121242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023323984,0.00030906187,0.00038788913,0.000011613923,0.00027923318,0.000041799074,0.00016277854,0.00022460696,0.00009284206],"category_scores_gemma":[0.000049016136,0.00012226847,0.00008543542,0.000102273545,0.00015208132,0.000091966074,0.00027863926,0.00021782822,0.000010266782],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004026884,0.000198362,0.022831341,0.000010757994,0.000014304148,0.000038769667,0.000050897037,5.529528e-7,0.97409505,0.00010506421,0.00030885593,0.0023057617],"study_design_scores_gemma":[0.0005680217,0.0013334954,0.76594526,0.00004013357,0.00010023368,0.0010080091,0.0003604771,0.000103489234,0.22275563,0.00029297257,0.006699765,0.0007925176],"about_ca_topic_score_codex":0.000028895056,"about_ca_topic_score_gemma":0.0000019660404,"teacher_disagreement_score":0.75133944,"about_ca_system_score_codex":0.000018065886,"about_ca_system_score_gemma":0.0000022953398,"threshold_uncertainty_score":0.4985963},"labels":[],"label_agreement":null},{"id":"W1489880960","doi":"10.1016/j.pmpp.2005.05.006","title":"Silicon induces antifungal compounds in powdery mildew-infected wheat","year":2005,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Silicon Effects in Agriculture","field":"Agricultural and Biological Sciences","cited_by":204,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Powdery mildew; Biology; Blumeria graminis; Haustorium; Botany; Hypha; Sphaerotheca; Phytoalexin; Abiotic component; Ascomycota; Bioassay; Mildew; Plant physiology; Plant disease resistance; Host (biology); Biochemistry","score_opus":0.013559371247509808,"score_gpt":0.21517198158235812,"score_spread":0.2016126103348483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1489880960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99728674,0.00065272866,0.0000010423903,0.0009882203,0.00008668521,0.00024976674,0.000060470673,0.00010445744,0.0005698655],"genre_scores_gemma":[0.9975951,0.00012932865,0.00007113414,0.0016907486,0.00018957612,0.00003164394,0.0002712467,0.00000138203,0.000019869038],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982053,0.00036158742,0.00026129495,0.0005793953,0.00012624935,0.0004661842],"domain_scores_gemma":[0.9994641,0.000246148,0.000071281625,0.00007174365,0.000026810421,0.000119924385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017201765,0.00026839698,0.0004102915,0.000024363197,0.00010808182,0.000033025342,0.00021659787,0.00034276233,0.00010183494],"category_scores_gemma":[0.00007713706,0.00009709836,0.00009065516,0.0002431427,0.00017044031,0.000082184946,0.00015750442,0.00034731443,0.000032001746],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004273895,0.00020522329,0.0034830181,0.000005265299,0.000007710534,0.00017142382,0.000030672138,0.000013587793,0.9877538,0.00043256336,0.00043878288,0.0074152285],"study_design_scores_gemma":[0.00044285512,0.00065675116,0.86924434,0.000027957894,0.000012469654,0.0003366208,0.00006569909,0.000109317734,0.12626196,0.00068428996,0.0017476883,0.00041003496],"about_ca_topic_score_codex":0.000030471323,"about_ca_topic_score_gemma":0.00011415627,"teacher_disagreement_score":0.86576134,"about_ca_system_score_codex":0.000018390874,"about_ca_system_score_gemma":0.000004135177,"threshold_uncertainty_score":0.39595562},"labels":[],"label_agreement":null},{"id":"W1491927243","doi":"10.1006/pmpp.2001.0322","title":"Pre-inoculation of Ri T-DNA transformed cucumber roots with the mycoparasite, Verticillium lecanii, induces host defense reactions against Pythium ultimum infection","year":2001,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Pythium ultimum; Hypha; Pythium; Botany; Verticillium dahliae; Root rot; Xylem; Pathogen; Microbiology; Biological pest control","score_opus":0.01636652535767781,"score_gpt":0.2263672762907392,"score_spread":0.21000075093306136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1491927243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99835676,0.000093435105,0.00011306374,0.0004627221,0.000080687525,0.0002469289,0.00007423237,0.000043861757,0.0005282967],"genre_scores_gemma":[0.99879783,0.00041157534,0.00002630606,0.00036105674,0.00004587073,0.000032291744,0.00028519414,0.0000015520595,0.00003829591],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989037,0.00023547174,0.00022905233,0.00027259483,0.00010050777,0.00025866626],"domain_scores_gemma":[0.99948645,0.0001701613,0.00012888086,0.00008008485,0.00007371876,0.0000607056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013013108,0.00017884016,0.0002361824,0.000020658923,0.00028410027,0.000024585761,0.00010480502,0.0001623054,0.000036540623],"category_scores_gemma":[0.00003794767,0.00006194703,0.00007264593,0.00021342392,0.00017915225,0.00011682218,0.000036527756,0.0002706662,0.000005836893],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023805015,0.00016776499,0.0021710345,0.0000059406034,0.00002606819,0.000033165536,0.00006123173,0.00006978134,0.99450535,0.000072918425,0.00006474898,0.0025839577],"study_design_scores_gemma":[0.00035312952,0.0011360429,0.8842574,0.000044718392,0.000061365245,0.0006222591,0.00012488714,0.00025122796,0.108322464,0.00020556693,0.0043478967,0.00027306253],"about_ca_topic_score_codex":0.00050504605,"about_ca_topic_score_gemma":0.0006531542,"teacher_disagreement_score":0.8861829,"about_ca_system_score_codex":0.000013595043,"about_ca_system_score_gemma":0.000007777713,"threshold_uncertainty_score":0.25261265},"labels":[],"label_agreement":null},{"id":"W1491982843","doi":"10.1016/j.pmpp.2008.11.003","title":"TAB2, a nucleoside diphosphate protein kinase, is a component of the tMEK2 disease resistance pathway in tomato","year":2008,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Carleton University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Nucleoside; Plant disease resistance; Nucleoside-diphosphate kinase; Kinase; Component (thermodynamics); Biochemistry; Gene","score_opus":0.015429232451684106,"score_gpt":0.19243311025927712,"score_spread":0.17700387780759302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1491982843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977399,0.00058090844,0.0000020555685,0.00083459256,0.000035690606,0.00026660107,0.0004135816,0.000017410357,0.00010922906],"genre_scores_gemma":[0.99893177,0.00011863057,0.000039376806,0.00072732556,0.000011910991,0.000038637158,0.000059448033,8.7881887e-7,0.000072011266],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989483,0.00022829868,0.00022770096,0.00027412412,0.000090301866,0.00023131877],"domain_scores_gemma":[0.9996399,0.000061180894,0.00010342153,0.00009858436,0.000025484267,0.000071386436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007699282,0.0001415629,0.00024033732,0.0000100649095,0.00015853571,0.0000071290547,0.00021288956,0.00007582686,0.00004815185],"category_scores_gemma":[0.00004936404,0.000049138667,0.00009500723,0.00014041938,0.00022373704,0.000036131605,0.00017018478,0.00017631738,0.000005400381],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016244155,0.00022745122,0.0010833138,0.0000099657345,0.000004513204,0.00027207244,0.000042269472,0.0000020486032,0.9972803,0.0004716346,0.00015566558,0.00028832853],"study_design_scores_gemma":[0.00023454038,0.00014619833,0.77545244,0.00010249001,0.000005278609,0.00009055935,0.00003912885,0.000036929574,0.21885343,0.0014762192,0.0033748602,0.00018791312],"about_ca_topic_score_codex":0.00011172959,"about_ca_topic_score_gemma":0.00010205209,"teacher_disagreement_score":0.7784269,"about_ca_system_score_codex":0.0000089442665,"about_ca_system_score_gemma":0.000008730479,"threshold_uncertainty_score":0.20038167},"labels":[],"label_agreement":null},{"id":"W1493257545","doi":"10.1006/pmpp.2002.0425","title":"In this issue: secondary metabolites and plant defence","year":2002,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Allelopathy and phytotoxic interactions","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology","score_opus":0.01736953949768523,"score_gpt":0.2053592087941205,"score_spread":0.1879896692964353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1493257545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944853,0.002091373,0.0000023476503,0.00094713416,0.00007663892,0.00010051717,0.00017612384,0.00002362677,0.0020969163],"genre_scores_gemma":[0.9961484,0.001189097,0.000089220215,0.002228819,0.000080103644,0.00002368393,0.00006857386,6.6113216e-7,0.0001714562],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990536,0.00014421862,0.00015723112,0.0003384193,0.00005639084,0.00025016477],"domain_scores_gemma":[0.99968785,0.00014444526,0.000042548683,0.000039063685,0.000010758501,0.00007530608],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008561156,0.00014047239,0.00022936483,0.000013627313,0.000107370724,0.000017669192,0.0000909951,0.00012515903,0.0016594598],"category_scores_gemma":[0.000038340604,0.000055120723,0.000039753402,0.00008712459,0.00012503717,0.00007404603,0.0000879598,0.00022404637,0.000042505722],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027209793,0.0000976,0.00037583784,0.000006063673,0.000006527555,0.00039583922,0.00016118668,6.149523e-7,0.9889335,0.0021487249,0.0013070869,0.006539815],"study_design_scores_gemma":[0.0014986405,0.0031310038,0.53693014,0.00010894931,0.00007929094,0.005083019,0.0009116784,0.0014639314,0.109671645,0.03687753,0.30223086,0.0020133194],"about_ca_topic_score_codex":0.00002902393,"about_ca_topic_score_gemma":0.000032669643,"teacher_disagreement_score":0.87926185,"about_ca_system_score_codex":0.0000034857205,"about_ca_system_score_gemma":0.0000012553578,"threshold_uncertainty_score":0.99925315},"labels":[],"label_agreement":null},{"id":"W1515629842","doi":"10.1016/j.pmpp.2006.06.004","title":"The family 10 of plant pathogenesis-related proteins: Their structure, regulation, and function in response to biotic and abiotic stresses","year":2006,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":419,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada","funders":"","keywords":"Biology; Abiotic component; Function (biology); Gene family; Adaptation (eye); Protein family; Gene; Abiotic stress; Computational biology; Biotic stress; Pathogenesis; Genetics; Cell biology; Evolutionary biology; Neuroscience; Ecology; Gene expression; Immunology","score_opus":0.009738874823966985,"score_gpt":0.18684449367152198,"score_spread":0.177105618847555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1515629842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99785,0.0010422582,0.000004664921,0.0002960994,0.000033747492,0.00024839805,0.00049944065,0.0000142111285,0.000011173883],"genre_scores_gemma":[0.9994626,0.0001791311,0.000026539461,0.00010177259,0.0000131395345,0.000008959191,0.00018665512,9.1803975e-7,0.000020277008],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989381,0.0003469661,0.00023157604,0.0002541864,0.00005000744,0.00017919723],"domain_scores_gemma":[0.99946845,0.0003246612,0.00008190005,0.000056442746,0.000030275574,0.000038253675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018254187,0.00013400782,0.00019549856,0.000024295938,0.00016346521,0.000025016465,0.000075448545,0.000121958634,0.0000118711205],"category_scores_gemma":[0.00007933102,0.000046633184,0.000024471456,0.00013052693,0.00015320444,0.000033889384,0.00008434828,0.00010636672,8.605515e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000597209,0.000044617376,0.0005631552,0.0000065308873,0.000006048046,0.000015778971,0.000022076045,0.000011261207,0.9947931,0.00026349982,0.000037039845,0.0036396547],"study_design_scores_gemma":[0.00016667925,0.00068326545,0.9632618,0.000028485098,0.00000939724,0.00011354729,0.000117597825,0.00008003845,0.030610349,0.0037975449,0.0010157815,0.000115555],"about_ca_topic_score_codex":0.00013522989,"about_ca_topic_score_gemma":0.00020011165,"teacher_disagreement_score":0.9641828,"about_ca_system_score_codex":0.0000054243164,"about_ca_system_score_gemma":0.000004478146,"threshold_uncertainty_score":0.1901646},"labels":[],"label_agreement":null},{"id":"W1516636792","doi":"10.1016/j.pmpp.2010.09.001","title":"Effect of Mitovirus infection on formation of infection cushions and virulence of Botrytis cinerea","year":2010,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Huazhong Agricultural University","keywords":"Botrytis cinerea; Pectinase; Biology; Inoculation; Laccase; Strain (injury); Microbiology; Virulence; Oxalic acid; Pectin; Botany; Horticulture; Enzyme; Biochemistry","score_opus":0.01474609326120666,"score_gpt":0.25319893669003396,"score_spread":0.2384528434288273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1516636792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993395,0.00006269202,0.000013430574,0.00003883004,0.00004046888,0.00016351968,0.00024116796,0.000012323056,0.00008805923],"genre_scores_gemma":[0.99902445,0.00083583675,0.000017203402,0.000022063803,0.00001877392,0.000014222957,0.00006559738,4.449779e-7,0.0000014083336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992131,0.00020869436,0.00018046919,0.00016964103,0.00009854367,0.00012952738],"domain_scores_gemma":[0.9994039,0.000349497,0.00012827989,0.00004000968,0.000039518934,0.000038779628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022306974,0.00010262219,0.0002742006,0.00002643487,0.000058619273,0.000003100247,0.000043799788,0.00012017909,0.0000093689705],"category_scores_gemma":[0.0002632821,0.00003835413,0.0000518986,0.00010354139,0.00023121362,0.000046269797,0.000080703154,0.00015210458,0.00000107231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015057699,0.000062839485,0.0033600114,0.00005557645,0.000007496244,0.0000052629466,0.00001330893,0.0000038596645,0.9860272,0.00032344012,0.000018826886,0.009971622],"study_design_scores_gemma":[0.00013493985,0.0025558362,0.34216815,0.00002143675,0.000012031769,0.000030649062,0.000002228553,0.00006864535,0.654618,0.00027922436,0.000054051197,0.000054754117],"about_ca_topic_score_codex":0.00015033674,"about_ca_topic_score_gemma":0.00010381305,"teacher_disagreement_score":0.33880815,"about_ca_system_score_codex":0.0000021752512,"about_ca_system_score_gemma":0.0000017295073,"threshold_uncertainty_score":0.1564036},"labels":[],"label_agreement":null},{"id":"W1518783157","doi":"10.1016/j.pmpp.2005.09.009","title":"Genes encoding pathogenesis-related proteins PR-2, PR-3 and PR-9, are differentially regulated in potato leaves inoculated with isolates from US-1 and US-8 genotypes of Phytophthora infestans (Mont.) de Bary","year":2005,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phytophthora infestans; Biology; Inoculation; Pathogenesis-related protein; Genotype; Gene; Pathogenesis; Botany; Genetics; Horticulture; Solanaceae; Immunology","score_opus":0.007879395887983313,"score_gpt":0.17931159452379025,"score_spread":0.17143219863580694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1518783157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935592,0.0053089955,0.000021461321,0.00019655608,0.00001579907,0.00040073064,0.00042686655,0.00004755251,0.00002288019],"genre_scores_gemma":[0.99679065,0.0019673374,0.00080720114,0.00013364846,0.0000360366,0.000029439141,0.0002181434,0.000004162497,0.000013369414],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981115,0.00032231188,0.00038013342,0.00064254145,0.000114504975,0.0004290482],"domain_scores_gemma":[0.9993943,0.00011559889,0.000218361,0.00008546516,0.000046253812,0.00014004193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014564021,0.00032707464,0.0005882353,0.000038648544,0.00014289007,0.000032475637,0.00013758375,0.0003362465,0.000019988629],"category_scores_gemma":[0.00003388663,0.00014021389,0.000055371096,0.00018600443,0.0002891505,0.00007873679,0.00013651153,0.00020624384,7.2793114e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029690453,0.00014494246,0.07161248,0.000029901645,0.000038782717,0.00041559842,0.00007356308,0.00006882488,0.9240874,0.0000671229,0.0000016761095,0.0031627924],"study_design_scores_gemma":[0.00046069198,0.0005079153,0.9321401,0.00013690973,0.00004552173,0.00020076176,0.00007553162,0.00061233697,0.06500939,0.00042732165,0.00006127939,0.0003222088],"about_ca_topic_score_codex":0.00011753549,"about_ca_topic_score_gemma":0.00054096343,"teacher_disagreement_score":0.86052763,"about_ca_system_score_codex":0.000012877647,"about_ca_system_score_gemma":0.000012939627,"threshold_uncertainty_score":0.5717756},"labels":[],"label_agreement":null},{"id":"W1521440949","doi":"10.1016/j.pmpp.2004.05.004","title":"Gene cloning of a thaumatin-like (PR-5) protein of western white pine (Pinus monticola D. Don) and expression studies of members of the PR-5 group","year":2004,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada","funders":"Canadian Forest Service; University of Victoria","keywords":"Biology; Pathogenesis-related protein; Thaumatin; Complementary DNA; Western blot; Methyl jasmonate; cDNA library; Molecular biology; Gene; Sequence analysis; White (mutation); Gene expression; Botany; Genetics","score_opus":0.023108053114907514,"score_gpt":0.2322890703888476,"score_spread":0.2091810172739401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521440949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99858993,0.0008741927,0.000019271347,0.00009660373,0.000034750166,0.00023368785,0.00012950577,0.000006083278,0.00001599754],"genre_scores_gemma":[0.9992199,0.00025564534,0.0004199417,0.00004972485,0.000008409366,0.00001318318,0.000026730866,8.021305e-7,0.00000568558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991109,0.00015618437,0.0003268533,0.00018517098,0.00008531253,0.00013561532],"domain_scores_gemma":[0.9994446,0.00007496294,0.000316242,0.00007580273,0.000061685416,0.000026712436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013305503,0.00012367523,0.00040590198,0.000013551414,0.00006598198,0.0000030666833,0.00014320415,0.000089471585,0.0000066111884],"category_scores_gemma":[0.00005845144,0.000042266125,0.000076728815,0.000090369525,0.00033055927,0.000037440197,0.00024206072,0.00011498052,1.02187656e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011523762,0.0001754445,0.0013200665,0.00006270569,0.000026015196,0.000008486625,0.00020171842,0.000023469773,0.9975632,0.00007600084,0.000005920062,0.00042174535],"study_design_scores_gemma":[0.00030645705,0.000935991,0.1606938,0.0002682782,0.000022643053,0.00007642215,0.00039860848,0.0000081827075,0.8365802,0.00059636583,0.00002496337,0.00008806053],"about_ca_topic_score_codex":0.00013374722,"about_ca_topic_score_gemma":0.0000712127,"teacher_disagreement_score":0.16098295,"about_ca_system_score_codex":0.000004040287,"about_ca_system_score_gemma":0.000003877282,"threshold_uncertainty_score":0.17235625},"labels":[],"label_agreement":null},{"id":"W1526740267","doi":"10.1006/pmpp.2000.0295","title":"Evidence for sulfate derepression of an arylsulfatase gene of Colletotrichum gloeosporioides f. sp.malvae during infection of round-leaved mallow, Malva pusilla","year":2000,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Neurospora crassa; Botany; Gene; Gene expression; Microbiology; Heterothallic; Colletotrichum; Sclerotinia sclerotiorum; Genetics; Mating type","score_opus":0.032986198899416314,"score_gpt":0.24804243029733047,"score_spread":0.21505623139791416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1526740267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973671,0.0014066334,0.0000176565,0.00003897899,0.000023316054,0.0002840441,0.00083074387,0.000015326166,0.000016234704],"genre_scores_gemma":[0.9961822,0.003042508,0.0002885506,0.000050643554,0.000039459967,0.000020647007,0.00036005932,0.0000013511005,0.000014586428],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987613,0.00015193263,0.00036103636,0.00036210087,0.00012626857,0.00023738043],"domain_scores_gemma":[0.9993932,0.00015595491,0.00019731997,0.00009363501,0.00006953171,0.00009032422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014699594,0.00015893558,0.00041379017,0.000019740455,0.000080900914,0.0000062163144,0.00013846037,0.00015251776,0.00006303478],"category_scores_gemma":[0.00007002014,0.0000722521,0.00012529602,0.00014410769,0.00015290426,0.00007452965,0.000054108834,0.00006074812,8.0533835e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001160725,0.00024560536,0.0035982642,0.000093489776,0.00001797003,0.000058929087,0.000013923052,0.00016571496,0.99016845,0.00004722281,0.000010364023,0.0044193296],"study_design_scores_gemma":[0.00031785588,0.001020003,0.53736985,0.00008501932,0.000043825243,0.0000455813,0.000015369043,0.00009915838,0.46009222,0.0007249424,0.0000476017,0.00013858532],"about_ca_topic_score_codex":0.000086565444,"about_ca_topic_score_gemma":0.00004287994,"teacher_disagreement_score":0.5337716,"about_ca_system_score_codex":0.000005469638,"about_ca_system_score_gemma":0.000008879505,"threshold_uncertainty_score":0.2946355},"labels":[],"label_agreement":null},{"id":"W1533752099","doi":"10.1016/j.pmpp.2004.10.002","title":"Tolerance to a non-host isolate of Verticillium dahliae in tomato","year":2004,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Verticillium dahliae; Biology; Verticillium wilt; Pathogen; Host (biology); Fungus; Verticillium; Colonization; Population; Fungal pathogen; Limiting; Botany; Microbiology; Genetics","score_opus":0.01248062407313515,"score_gpt":0.2166074396769265,"score_spread":0.20412681560379134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1533752099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99889547,0.00008781277,0.000044081906,0.00048100253,0.00005933694,0.00013945703,0.00011570861,0.00001593459,0.00016117067],"genre_scores_gemma":[0.99871457,0.0000611652,0.00016840121,0.0009772527,0.000016890648,0.000015641814,0.000039086884,6.4808467e-7,0.000006367181],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99919075,0.00006056481,0.00020705817,0.0002485923,0.000050188555,0.00024283149],"domain_scores_gemma":[0.9997587,0.00004754951,0.000046147736,0.000055534318,0.000023466882,0.00006856333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000076444034,0.000121064804,0.0002610244,0.000018154919,0.00005113625,0.000008732923,0.00014507829,0.00009522066,0.000028035578],"category_scores_gemma":[0.00003509792,0.000049572034,0.00005018086,0.00015497446,0.000060879822,0.000038996815,0.000110396526,0.00013647991,0.000019897783],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085868676,0.00015115966,0.00022550469,0.000004750669,0.0000035309176,0.00010538686,0.000057093628,0.00008319444,0.9984338,0.0002171048,0.000018171622,0.0006144186],"study_design_scores_gemma":[0.00040860026,0.0012307392,0.7020572,0.00008856545,0.0000070967308,0.00020647749,0.00010712517,0.000079002035,0.2937053,0.0012106093,0.00063784415,0.00026145228],"about_ca_topic_score_codex":0.00025621924,"about_ca_topic_score_gemma":0.00016518148,"teacher_disagreement_score":0.7047285,"about_ca_system_score_codex":0.000010003815,"about_ca_system_score_gemma":0.000004566613,"threshold_uncertainty_score":0.20214888},"labels":[],"label_agreement":null},{"id":"W1535454177","doi":"10.1016/j.pmpp.2008.01.003","title":"Conservation of NON-EXPRESSOR OF PATHOGENESIS-RELATED GENES1 function between Arabidopsis thaliana and Brassica napus","year":2007,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Plant Biotechnology Institute; University of Saskatchewan","funders":"","keywords":"Biology; Pseudomonas syringae; Arabidopsis; Brassica; Arabidopsis thaliana; Canola; NPR1; Systemic acquired resistance; Plant disease resistance; Mutant; Gene; Genetics; Microbiology; Botany","score_opus":0.017829409438158698,"score_gpt":0.21938034718388785,"score_spread":0.20155093774572916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1535454177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99892515,0.0002515623,0.00016580719,0.00011528425,0.00005201344,0.00011904572,0.0002561908,0.000014707814,0.00010022048],"genre_scores_gemma":[0.9992319,0.00014066398,0.00011774391,0.00013742375,0.000023357456,0.0000036688498,0.00033262288,8.6651505e-7,0.000011763649],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990991,0.00011400873,0.0003104629,0.00023085727,0.000067249835,0.00017832822],"domain_scores_gemma":[0.9994258,0.00021751747,0.00018906269,0.00005400873,0.00005643958,0.00005714697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023119716,0.00012479232,0.00030360222,0.000022816432,0.00008286775,0.0000058672085,0.00008461804,0.00018055816,0.000030196288],"category_scores_gemma":[0.00004058476,0.00005449746,0.00006327733,0.00012353604,0.00017038838,0.000045403056,0.000075986085,0.00011186742,0.000001619511],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009733627,0.00007524304,0.010421518,0.000011957431,0.000025766907,0.00001723353,0.000020253767,9.897169e-7,0.97916484,0.00011629997,0.000032341683,0.010016193],"study_design_scores_gemma":[0.00013536538,0.000512658,0.7362848,0.00001720903,0.00003188885,0.00004690035,0.00006091864,0.000018942757,0.26214668,0.000427739,0.00022507782,0.00009180199],"about_ca_topic_score_codex":0.00011945594,"about_ca_topic_score_gemma":0.000025058273,"teacher_disagreement_score":0.7258633,"about_ca_system_score_codex":0.000003998328,"about_ca_system_score_gemma":0.0000034971229,"threshold_uncertainty_score":0.22223419},"labels":[],"label_agreement":null},{"id":"W1546567378","doi":"10.1016/j.pmpp.2005.12.004","title":"Characterization of the ToxB gene from North African and Canadian isolates of Pyrenophora tritici-repentis","year":2005,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pyrenophora; Biology; ORFS; Genetics; Gene; Locus (genetics); Open reading frame; Microbiology; Peptide sequence","score_opus":0.008582089505586908,"score_gpt":0.16516661217225914,"score_spread":0.15658452266667222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1546567378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979926,0.00029471042,0.0000030643278,0.0006473595,0.000028585344,0.00013034882,0.00082876516,0.0000070109286,0.00006758081],"genre_scores_gemma":[0.9987702,0.00030460206,0.00006920783,0.00044818092,0.000060291848,0.0000067176006,0.00033242014,5.593369e-7,0.000007857944],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99930835,0.000088834866,0.00017413899,0.0002132085,0.000054860782,0.0001606082],"domain_scores_gemma":[0.99971366,0.000041311745,0.00009011243,0.000049970477,0.000028268443,0.000076663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000040701558,0.00010284839,0.00021499442,0.000008348873,0.00007273142,0.0000071190157,0.00012844724,0.00010188444,0.000045733777],"category_scores_gemma":[0.000017059041,0.000033070577,0.0000472232,0.000106254985,0.00012036609,0.000024433371,0.000072873874,0.00007623493,0.0000010095979],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014860495,0.00003861247,0.0025346945,0.0000030761992,0.0000094074785,0.000005085833,0.00004560313,7.72097e-7,0.9919752,0.00017671939,0.0000128737265,0.0051830783],"study_design_scores_gemma":[0.0000883954,0.00023246203,0.73394334,0.000009080071,0.000018757935,0.000022306403,0.000021933793,0.000022563141,0.26350668,0.00033183626,0.0017072713,0.00009538384],"about_ca_topic_score_codex":0.0013617277,"about_ca_topic_score_gemma":0.006116729,"teacher_disagreement_score":0.73140866,"about_ca_system_score_codex":0.000004128148,"about_ca_system_score_gemma":0.0000046110254,"threshold_uncertainty_score":0.34132785},"labels":[],"label_agreement":null},{"id":"W1557278569","doi":"10.1016/s0885-5765(03)00088-2","title":"Cytological and pharmacological evidence that biotrophic fungi trigger different cell death execution processes in host and nonhost cells during the hypersensitive response","year":2003,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Hypersensitive response; Programmed cell death; Powdery mildew; Cytoplasm; Extracellular; Cell biology; Intracellular; Plasmodesma; Vacuole; Botany; Plant cell; Hypha; Apoptosis; Biochemistry; Gene","score_opus":0.029207769795681526,"score_gpt":0.23206011055262563,"score_spread":0.2028523407569441,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1557278569","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968208,0.0022131465,0.0000065798454,0.00045072855,0.00005192611,0.00030663362,0.00009354311,0.000026692049,0.000029917297],"genre_scores_gemma":[0.9938368,0.0055719344,0.000026062116,0.00047064558,0.00001871064,0.000033413107,0.000018934923,0.000001302297,0.000022154416],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977761,0.0010548455,0.0002027423,0.0005081803,0.00008807219,0.00037008326],"domain_scores_gemma":[0.99864405,0.0010608378,0.00010589787,0.000055257548,0.000033606775,0.00010033152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002866324,0.00025116626,0.00033467924,0.000025118012,0.00031006744,0.0000511317,0.00011350234,0.00019976482,0.00003754618],"category_scores_gemma":[0.00022271632,0.00008515825,0.000047791014,0.00013097304,0.00030758412,0.00008187515,0.00015997358,0.00038689852,0.000003706094],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007961883,0.00017433267,0.0025276376,0.000015879139,0.00000745031,0.00040254436,0.00006315254,0.0000016608049,0.9957805,0.00004514743,0.000007656416,0.00017784149],"study_design_scores_gemma":[0.0003276885,0.00073031266,0.6205886,0.000041978692,0.000025740668,0.000854134,0.0002838238,0.000023920747,0.3765903,0.0001165109,0.0001957224,0.00022123795],"about_ca_topic_score_codex":0.00002442824,"about_ca_topic_score_gemma":0.00002061741,"teacher_disagreement_score":0.6191902,"about_ca_system_score_codex":0.000018062321,"about_ca_system_score_gemma":0.000007502687,"threshold_uncertainty_score":0.34726527},"labels":[],"label_agreement":null},{"id":"W1566021911","doi":"10.1006/pmpp.1999.0243","title":"Defense enzymes induced in cucumber roots by treatment with plant growth-promoting rhizobacteria (PGPR) and Pythium aphanidermatum","year":2000,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":532,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; McGill University","funders":"","keywords":"Pythium aphanidermatum; Rhizobacteria; Biology; Peroxidase; Phenylalanine ammonia-lyase; Polyphenol oxidase; Pseudomonas; Microbiology; Horticulture; Botany; Enzyme; Rhizosphere; Bacteria; Biochemistry; Biological pest control","score_opus":0.012123116434002094,"score_gpt":0.19798552776923542,"score_spread":0.18586241133523332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1566021911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99851876,0.0003681505,7.140472e-7,0.00030814455,0.000033257667,0.00018352272,0.00030991875,0.00003982262,0.00023770859],"genre_scores_gemma":[0.9979783,0.000835795,0.000032979533,0.00046599383,0.000027467371,0.000033876488,0.00058745925,0.0000018034688,0.00003631074],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987015,0.00024254112,0.00021080559,0.0004216636,0.000059939815,0.00036352198],"domain_scores_gemma":[0.999649,0.00011386478,0.00006269922,0.000056303496,0.000015986981,0.00010212973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006694711,0.00024649294,0.0003378491,0.00001644386,0.00015000177,0.000043173317,0.00009317652,0.00017070718,0.00012957532],"category_scores_gemma":[0.00001212458,0.00009253552,0.000035797195,0.00009478131,0.00008932857,0.000083407795,0.000054811735,0.00020035764,0.000010681146],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020480814,0.00022269189,0.001743939,0.000004795821,0.000015481466,0.00037932885,0.00006342224,2.5541263e-7,0.9911768,0.000060653514,0.00009634456,0.006031492],"study_design_scores_gemma":[0.0024364097,0.0088749835,0.52482873,0.0001852165,0.00008519131,0.0072928322,0.00035019068,0.0002477615,0.4425589,0.001367681,0.010364561,0.0014075041],"about_ca_topic_score_codex":0.00056191924,"about_ca_topic_score_gemma":0.00032884613,"teacher_disagreement_score":0.5486179,"about_ca_system_score_codex":0.000014707179,"about_ca_system_score_gemma":0.00000449088,"threshold_uncertainty_score":0.3773489},"labels":[],"label_agreement":null},{"id":"W1567034739","doi":"10.1016/j.pmpp.2005.05.005","title":"Metabolic profiling and factor analysis to discriminate quantitative resistance in wheat cultivars against fusarium head blight","year":2005,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":113,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Grain Research Centre; McGill University","funders":"Shiraz University","keywords":"Inoculation; Biology; Fusarium; Cultivar; Pathogen; Horticulture; Fungi imperfecti; Botany; Microbiology","score_opus":0.02685811707722144,"score_gpt":0.2578518753964434,"score_spread":0.23099375831922195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1567034739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953496,0.0021681853,0.000055896715,0.0014018223,0.000024827106,0.00026482574,0.00030907165,0.000033716646,0.00039209306],"genre_scores_gemma":[0.99534523,0.0004976312,0.0024872622,0.0012324711,0.00005042859,0.000048649847,0.00029516857,0.0000011416603,0.00004199048],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984115,0.00022203622,0.00026217234,0.00061563327,0.00011324557,0.00037545967],"domain_scores_gemma":[0.9995853,0.0001044433,0.000066176784,0.000065414344,0.000032745847,0.00014594174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121360405,0.00023648259,0.0004997763,0.00004934042,0.00010836859,0.000028633189,0.0001469661,0.00015279658,0.000013867019],"category_scores_gemma":[0.00005410961,0.00008550028,0.000097577285,0.00055544876,0.000100677804,0.00008573328,0.00013082677,0.0001826402,0.000007803001],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008527778,0.00010219372,0.0012962802,0.0000051389834,0.000048522255,0.00007039768,0.000214862,0.000020599113,0.98909974,0.00563912,0.000016790707,0.0034010643],"study_design_scores_gemma":[0.00040710988,0.0006369762,0.81093675,0.000024999837,0.00015256257,0.00002168864,0.00033765592,0.00018982396,0.17885761,0.0017452652,0.005991123,0.00069844245],"about_ca_topic_score_codex":0.000013713163,"about_ca_topic_score_gemma":0.00063042337,"teacher_disagreement_score":0.8102421,"about_ca_system_score_codex":0.000009794943,"about_ca_system_score_gemma":0.0000025520446,"threshold_uncertainty_score":0.34866002},"labels":[],"label_agreement":null},{"id":"W1580896487","doi":"10.1006/pmpp.2003.0441","title":"Modified expression of two receptor kinase genes in hexaploid oat (Avena sativa L.) on inoculation with crown rust","year":2002,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology; Gene; Genetics; Locus (genetics)","score_opus":0.02933447810562301,"score_gpt":0.2207670053246196,"score_spread":0.1914325272189966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1580896487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991026,0.00017806269,0.000016792097,0.000145102,0.000033434946,0.00014200484,0.00010940789,0.000020191032,0.0002523891],"genre_scores_gemma":[0.99915916,0.0002035097,0.00017370138,0.00020324606,0.00002738048,0.000017426246,0.00019387304,0.0000010447519,0.000020668042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990126,0.00022980133,0.00019543788,0.00028416904,0.0000789021,0.00019910908],"domain_scores_gemma":[0.9996406,0.000116538526,0.00010007955,0.00006559692,0.000027958155,0.00004922031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007110851,0.00015045602,0.00024683867,0.000024863419,0.00008697794,0.000012027623,0.000105210376,0.00010567601,0.00015878047],"category_scores_gemma":[0.000028626646,0.000054993154,0.00004461609,0.0001179311,0.00010219072,0.000058773985,0.00006108869,0.00017588327,0.000009828683],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020574906,0.00026782916,0.0005715899,0.0000049419755,0.0000036453894,0.00005213676,0.000036771165,0.00014174583,0.9922837,0.00019456011,0.00005450943,0.0061828005],"study_design_scores_gemma":[0.0008717113,0.00216804,0.15485948,0.0001562176,0.000011764585,0.00012766871,0.00012575372,0.0005481374,0.8392013,0.0005166667,0.0010323129,0.00038095773],"about_ca_topic_score_codex":0.00009028961,"about_ca_topic_score_gemma":0.00003468046,"teacher_disagreement_score":0.15428789,"about_ca_system_score_codex":0.000009642823,"about_ca_system_score_gemma":0.0000014871721,"threshold_uncertainty_score":0.22425556},"labels":[],"label_agreement":null},{"id":"W1582269918","doi":"10.1006/pmpp.2000.0270","title":"A functional gene-for-gene interaction is required for the production of an oxidative burst in response to infection with avirulent Pseudomonas syringae pv. tomato in Arabidopsis thaliana","year":2000,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pseudomonas syringae; Biology; Arabidopsis thaliana; Arabidopsis; Respiratory burst; Hypersensitive response; Virulence; Microbiology; Pathogen; Gene; Genetics; Mutant; Plant disease resistance; Biochemistry","score_opus":0.030610472774960755,"score_gpt":0.25085952581889304,"score_spread":0.22024905304393227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1582269918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99810874,0.000036438956,0.00010001087,0.0008750793,0.00008186745,0.00056711887,0.00021065875,0.000013888908,0.000006176851],"genre_scores_gemma":[0.9988933,0.00007316781,0.00022183731,0.00029012322,0.00004251346,0.00020856327,0.00023535031,0.0000013524359,0.00003374738],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989453,0.00026054188,0.00021543166,0.00033528428,0.000060031874,0.00018343278],"domain_scores_gemma":[0.99952435,0.00024136255,0.00007589103,0.0000695052,0.000052475785,0.000036407793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003506541,0.00012753956,0.00019784375,0.000037546575,0.00011956367,0.000014396683,0.00007550559,0.00008643254,0.000037363003],"category_scores_gemma":[0.00009062606,0.000050668736,0.000051835996,0.00019406047,0.000065311884,0.00010596953,0.00002351486,0.00011489539,0.0000025513289],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005342444,0.0002407782,0.0003715345,0.0000049342943,0.000013262158,0.00000790287,0.00012069171,0.0006421274,0.9878046,0.000020227562,0.00004578814,0.005385694],"study_design_scores_gemma":[0.00038264898,0.0025122142,0.61607033,0.000052846146,0.00001886281,0.00028075185,0.00023673997,0.0004334965,0.37864524,0.0003061438,0.0008805833,0.00018012013],"about_ca_topic_score_codex":0.00032655694,"about_ca_topic_score_gemma":0.00045154494,"teacher_disagreement_score":0.6156988,"about_ca_system_score_codex":0.000028003653,"about_ca_system_score_gemma":0.0000068427958,"threshold_uncertainty_score":0.20662111},"labels":[],"label_agreement":null},{"id":"W1585402513","doi":"10.1006/pmpp.2002.0435","title":"Hydrogen peroxide plays a critical role in the defence response of tomato to Cladosporium fulvum","year":2002,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Hydrogen peroxide; Conidium; Catalase; Callose; Superoxide dismutase; Germ tube; Reactive oxygen species; Microbiology; Cladosporium; Hypha; Phytoalexin; Appressorium; Nicotinamide adenine dinucleotide phosphate; Biochemistry; Botany; Oxidase test; Cell wall; Enzyme; Aspergillus","score_opus":0.014372135785424373,"score_gpt":0.23243499858784136,"score_spread":0.218062862802417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1585402513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99706775,0.0015132257,0.00014461862,0.0003339588,0.000024717314,0.00018452307,0.00055397965,0.000009154783,0.00016804959],"genre_scores_gemma":[0.99752617,0.00012677094,0.00024447034,0.0019111972,0.000035508223,0.000052186737,0.00008384809,0.0000082404395,0.0000116365945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843615,0.0004323854,0.00023444455,0.0004377697,0.00011762851,0.00034158918],"domain_scores_gemma":[0.99942166,0.00010886271,0.000040290808,0.0002805823,0.000029567042,0.00011901349],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002554537,0.00018130288,0.0002524226,0.00004893766,0.00005405864,0.00000910274,0.00025452996,0.00017263503,0.000018015806],"category_scores_gemma":[0.00045296812,0.00012243752,0.00009225466,0.00010663302,0.00017356817,0.000003514909,0.00015309433,0.00011562231,0.0000152045195],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005652461,0.00020062468,0.00061272806,0.000012334626,0.000008484163,0.00053497014,0.00011511204,0.000039569302,0.9969921,0.0006012439,0.0002211366,0.000096424184],"study_design_scores_gemma":[0.0012504958,0.004931543,0.26236546,0.00007397963,0.000088089364,0.002291084,0.000689828,0.00071848807,0.7218958,0.0016434711,0.0031007745,0.00095098896],"about_ca_topic_score_codex":0.0000042808942,"about_ca_topic_score_gemma":0.0000043344166,"teacher_disagreement_score":0.27509633,"about_ca_system_score_codex":0.0000041682415,"about_ca_system_score_gemma":0.000011455893,"threshold_uncertainty_score":0.4992857},"labels":[],"label_agreement":null},{"id":"W1586525548","doi":"10.1016/j.pmpp.2005.11.002","title":"Nitric oxide modulates H2O2-mediated defenses in the Colletotrichum coccodes–tomato interaction","year":2005,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant responses to elevated CO2","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Callose; Catalase; Biology; Superoxide dismutase; Nitric oxide; Reactive oxygen species; Lycopersicon; Superoxide; Microbiology; Hydrogen peroxide; Solanaceae; Biochemistry; Cell biology; Botany; Cell wall; Oxidative stress; Enzyme","score_opus":0.016121297869425524,"score_gpt":0.21439606679117498,"score_spread":0.19827476892174944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1586525548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99742645,0.00048055948,0.0000047569347,0.0014126172,0.000022955348,0.00024688107,0.00012502917,0.000070033384,0.00021074155],"genre_scores_gemma":[0.995715,0.00029660677,0.000062047024,0.0034449063,0.00005616597,0.00005104426,0.00035424164,0.000001143117,0.000018821805],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982546,0.00055562594,0.00026026944,0.00039465242,0.00014367231,0.0003912089],"domain_scores_gemma":[0.99893963,0.0007947839,0.000090598696,0.00007399917,0.000033458517,0.000067522364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026983942,0.00020561847,0.0002775346,0.000040023995,0.00012758085,0.000038276117,0.00026295532,0.0001919407,0.000052172654],"category_scores_gemma":[0.0002651627,0.000069214344,0.00007099543,0.0003792182,0.000108350694,0.000068049725,0.00009338998,0.00028334788,0.00006148727],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017364149,0.00014635008,0.00045795375,0.0000027042993,0.00000781667,0.00041074242,0.000030404475,0.000065690554,0.99478227,0.00025631028,0.00049573486,0.0031704018],"study_design_scores_gemma":[0.0009202927,0.00093906047,0.9262739,0.000042858555,0.000046848785,0.002855125,0.0006279464,0.0038819194,0.040452708,0.0021431388,0.021005718,0.00081052375],"about_ca_topic_score_codex":0.00003782202,"about_ca_topic_score_gemma":0.00010233094,"teacher_disagreement_score":0.95432955,"about_ca_system_score_codex":0.00001792479,"about_ca_system_score_gemma":0.0000055582227,"threshold_uncertainty_score":0.2822479},"labels":[],"label_agreement":null},{"id":"W1592039021","doi":"10.1016/j.pmpp.2010.08.003","title":"Sulfated macroalgal polysaccharides λ-carrageenan and ι-carrageenan differentially alter Arabidopsis thaliana resistance to Sclerotinia sclerotiorum","year":2010,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acadian Seaplants (Canada); Nova Scotia Department of Agriculture","funders":"Atlantic Canada Opportunities Agency; Department of Agriculture, Nova Scotia","keywords":"Sclerotinia sclerotiorum; Carrageenan; Biology; Salicylic acid; Jasmonic acid; Arabidopsis thaliana; Botany; Arabidopsis; Sulfation; Microbiology; Biochemistry; Mutant; Gene","score_opus":0.01165197085818716,"score_gpt":0.1976429813711601,"score_spread":0.18599101051297293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1592039021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996953,0.00017424588,0.000057452813,0.0013668628,0.00022436326,0.00036947028,0.0005956496,0.000102921134,0.00015601638],"genre_scores_gemma":[0.9977086,0.0001401069,0.00057666335,0.0010359676,0.00015279504,0.000048935744,0.00019647462,0.000004184301,0.00013624024],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99778146,0.00015617275,0.00031781537,0.0008790903,0.00019251088,0.0006729816],"domain_scores_gemma":[0.99925196,0.00007883747,0.000109787,0.0001437909,0.00004959833,0.00036601812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022089071,0.00036725614,0.00049133657,0.000034383556,0.00034107614,0.00009272128,0.00030300583,0.00030540806,0.00013259897],"category_scores_gemma":[0.00005435873,0.00015293353,0.00010901518,0.00019069621,0.00020858528,0.000060473398,0.0002572804,0.00037165475,0.000018342902],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012755912,0.00008430847,0.0005282513,0.000011573335,0.000017405328,0.0002689761,0.00003727907,7.089474e-7,0.9944537,0.0017316509,0.00016400448,0.0025745705],"study_design_scores_gemma":[0.00059973425,0.0010003082,0.5712171,0.00008988284,0.00006580535,0.0003342444,0.0001391607,0.000055830533,0.4185508,0.004757103,0.0021406033,0.0010494235],"about_ca_topic_score_codex":0.000028582825,"about_ca_topic_score_gemma":0.00095347315,"teacher_disagreement_score":0.57590294,"about_ca_system_score_codex":0.000006012828,"about_ca_system_score_gemma":0.000006380038,"threshold_uncertainty_score":0.6236448},"labels":[],"label_agreement":null},{"id":"W159464391","doi":"10.1006/pmpp.2000.0275","title":"Expression of plant defence-related (PR-protein) transcripts during hardening and dehardening of winter wheat","year":2000,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Chitinase; Biology; Glucanase; Phenylalanine ammonia-lyase; Peroxidase; Pathogenesis-related protein; Isozyme; Poaceae; Cultivar; Gene expression; Botany; Horticulture; Gene; Molecular biology; Genetics; Enzyme; Biochemistry","score_opus":0.009946679876615763,"score_gpt":0.1815892888561651,"score_spread":0.17164260897954933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W159464391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987584,0.0006577632,0.0000018401397,0.00008927604,0.000019963067,0.00016464705,0.00014929069,0.00003299221,0.00012587552],"genre_scores_gemma":[0.99953675,0.000087012435,0.0001866564,0.000057508383,0.000017211472,0.000012671976,0.000074688476,0.0000016295046,0.000025887506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987329,0.0001795444,0.00031567508,0.0003864393,0.00011676731,0.00026862338],"domain_scores_gemma":[0.99968314,0.000057570593,0.00009679838,0.00005827068,0.00002225952,0.00008197723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010256653,0.00017800587,0.0003823047,0.000016997026,0.000094718176,0.000008931194,0.00013949441,0.0001893062,0.00022134725],"category_scores_gemma":[0.000023018296,0.00007447451,0.00009587283,0.000082194856,0.00020968982,0.00005073364,0.00007329114,0.00016033562,0.00000265715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017546111,0.000050672053,0.0008155547,0.000027022852,0.000013231757,0.00009172508,0.00014865107,0.0000021336962,0.997461,0.000049806265,0.000007139972,0.0011575947],"study_design_scores_gemma":[0.0003198593,0.00046773508,0.07367799,0.00014591895,0.000021733005,0.00019539105,0.00006388222,0.000012219015,0.92450917,0.0003930386,0.000027997303,0.00016508505],"about_ca_topic_score_codex":0.000019165296,"about_ca_topic_score_gemma":0.000004135263,"teacher_disagreement_score":0.07295185,"about_ca_system_score_codex":0.0000039541146,"about_ca_system_score_gemma":0.0000027574595,"threshold_uncertainty_score":0.30369824},"labels":[],"label_agreement":null},{"id":"W1602669306","doi":"10.1006/pmpp.2002.0420","title":"Milsana-induced resistance in powdery mildew-infected cucumber plants correlates with the induction of chalcone synthase and chalcone isomerase","year":2002,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":95,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Natural Resources Canada; Canadian Forest Service","funders":"","keywords":"Cucumis; Powdery mildew; Chalcone synthase; Chalcone isomerase; Sphaerotheca; Biology; Flavonoid; Chalcone; Botany; Mildew; Flavonoid biosynthesis; Inducer; Cucurbitaceae; Biochemistry; Gene; Gene expression; Antioxidant; Chemistry","score_opus":0.022009990293512194,"score_gpt":0.20389485241248353,"score_spread":0.18188486211897134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1602669306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971998,0.001411146,0.0000022297409,0.00085018517,0.000040316172,0.00017465133,0.00014035174,0.000018704526,0.00016264955],"genre_scores_gemma":[0.9985979,0.0009202787,0.000018751929,0.00030655673,0.00002141353,0.000019614741,0.00008700567,0.0000012017535,0.00002727173],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99897003,0.00022899482,0.00019470291,0.000298646,0.00006808985,0.00023952307],"domain_scores_gemma":[0.9995158,0.00021725935,0.00011509317,0.000071389986,0.000026870895,0.00005359139],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010770109,0.00016675924,0.0002874045,0.00002409263,0.0001335573,0.000013885998,0.00009796237,0.00014373507,0.00007399954],"category_scores_gemma":[0.000039923445,0.00005870515,0.000030580777,0.00014383238,0.00019831532,0.000065271495,0.00006476337,0.00027611034,0.00000425333],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014618669,0.00018131733,0.00074798544,0.0000071574154,0.000016550484,0.00014595645,0.00008961709,0.0000012324477,0.99644053,0.00011028928,0.000104443,0.0020087585],"study_design_scores_gemma":[0.0019863858,0.0028583582,0.8106839,0.00035371663,0.00008005159,0.0020556992,0.0010834106,0.00039637325,0.17689031,0.0010693008,0.0016331894,0.0009092959],"about_ca_topic_score_codex":0.00016628904,"about_ca_topic_score_gemma":0.00055859966,"teacher_disagreement_score":0.8195502,"about_ca_system_score_codex":0.0000062800987,"about_ca_system_score_gemma":0.0000020386092,"threshold_uncertainty_score":0.23939265},"labels":[],"label_agreement":null},{"id":"W1606872057","doi":"10.1016/j.pmpp.2005.03.004","title":"Proteomic and phosphoproteomic approaches to understand plant–pathogen interactions","year":2005,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Queen's University; Carleton University","funders":"","keywords":"Biology; Computational biology; Proteomics; Context (archaeology); Arabidopsis thaliana; Phosphoproteomics; Proteome; Arabidopsis; Oryza sativa; Function (biology); Protein phosphorylation; Phosphorylation; Cell biology; Genetics; Gene; Mutant; Protein kinase A","score_opus":0.06700468444660941,"score_gpt":0.21900889191112427,"score_spread":0.15200420746451487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1606872057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99635124,0.0001401076,0.00011383719,0.00205878,0.000055140663,0.0003760128,0.0005715007,0.000053038708,0.00028031334],"genre_scores_gemma":[0.99749494,0.00012528732,0.0008007601,0.0010738133,0.00008876103,0.000046310673,0.00030781273,0.0000015791907,0.000060739618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988551,0.00014334591,0.00020049133,0.00042830882,0.000061139865,0.00031162417],"domain_scores_gemma":[0.99962443,0.0000833111,0.00006378673,0.00006956631,0.00001364784,0.00014528328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012528225,0.0002001193,0.00025968903,0.000023449376,0.000250311,0.000049859344,0.00013877971,0.00011641467,0.000097321565],"category_scores_gemma":[0.000034680994,0.000085286716,0.000057184436,0.00008978832,0.00010902839,0.00008994969,0.00018509116,0.00026036866,0.000036019712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011479901,0.000106070525,0.00013979623,0.0000043540117,0.00001397087,0.000036036272,0.000092328366,0.000009461896,0.98941153,0.0006290954,0.00024321373,0.009199362],"study_design_scores_gemma":[0.0013051035,0.0034916163,0.31544283,0.00016361558,0.00012143497,0.0062669534,0.0018652701,0.0015763645,0.6177496,0.0059776907,0.0440454,0.0019941304],"about_ca_topic_score_codex":0.0000536665,"about_ca_topic_score_gemma":0.00011063589,"teacher_disagreement_score":0.37166193,"about_ca_system_score_codex":0.000020214593,"about_ca_system_score_gemma":0.000004724947,"threshold_uncertainty_score":0.34778914},"labels":[],"label_agreement":null},{"id":"W203993752","doi":"10.1016/j.pmpp.2013.01.001","title":"Regulated gene silencing in the fungal pathogen Ophiostoma novo-ulmi","year":2013,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Advanced Low Carbon Technology Research and Development Program; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; RNA interference; Gene silencing; Catabolite repression; Gene; Reporter gene; Gene expression; Ophiostoma; Heterologous; Expression cassette; Regulation of gene expression; Promoter; Cell biology; Genetics; Fungus; Botany; RNA; Vector (molecular biology); Recombinant DNA","score_opus":0.015943462739531476,"score_gpt":0.1981035477563592,"score_spread":0.1821600850168277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W203993752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99826384,0.00023722589,0.0000042774655,0.0008621372,0.00006311935,0.00022624493,0.00011371961,0.00003156569,0.00019789915],"genre_scores_gemma":[0.9975967,0.00011113825,0.000057720306,0.0018389552,0.000053673073,0.00004739303,0.00027892456,8.5606166e-7,0.000014643242],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987094,0.000362591,0.00021119314,0.00030568082,0.00008023033,0.00033091754],"domain_scores_gemma":[0.9995907,0.0001785809,0.00006262629,0.00008441508,0.000030076806,0.000053609678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017445833,0.00016273289,0.00021549982,0.000015689246,0.000168976,0.000044570854,0.00026275188,0.00014885019,0.00015796005],"category_scores_gemma":[0.00004810557,0.00005206777,0.00006669517,0.00015661727,0.00009952402,0.00007389024,0.00012238503,0.00027675138,0.000054972643],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019145002,0.00009905481,0.00031243998,0.0000018544977,0.0000048576962,0.0002810893,0.00006479959,0.000003971543,0.9951686,0.00012849532,0.0001940699,0.0037215927],"study_design_scores_gemma":[0.00021998433,0.00062699115,0.9336707,0.000019501013,0.000011509839,0.0021534574,0.000366081,0.00019415286,0.05951319,0.0021328356,0.00080132566,0.00029026548],"about_ca_topic_score_codex":0.00024363778,"about_ca_topic_score_gemma":0.000057162753,"teacher_disagreement_score":0.9356554,"about_ca_system_score_codex":0.000007978359,"about_ca_system_score_gemma":0.0000033019417,"threshold_uncertainty_score":0.21232621},"labels":[],"label_agreement":null},{"id":"W2186428316","doi":"10.1016/j.pmpp.2015.11.004","title":"Pre-treatment with calcium enhanced defense-related genes' expression in the soybean's isoflavones pathway in response to Sclerotinia sclerotiorum","year":2015,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Sclerotinia sclerotiorum; Biology; Inoculation; Genistein; Daidzein; Calcium; Microbiology; Gene expression; Botany; Isoflavones; Gene; Horticulture; Biochemistry; Internal medicine; Endocrinology","score_opus":0.026518913976478133,"score_gpt":0.2227254850048277,"score_spread":0.19620657102834957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2186428316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980722,0.00029778742,0.00006396549,0.0006408408,0.00006439905,0.00066027214,0.00009647719,0.000036505786,0.000067529116],"genre_scores_gemma":[0.99888116,0.00004934919,0.00020646489,0.0005135832,0.000028369952,0.00017980796,0.00010462705,0.000002109502,0.000034541747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977342,0.00076251425,0.00027227215,0.00056651776,0.00018235706,0.00048215824],"domain_scores_gemma":[0.99946725,0.000159392,0.00007810539,0.00011140909,0.000030261972,0.00015355565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005020473,0.00026237845,0.00036385105,0.000035759804,0.00010355845,0.000026216978,0.00022345946,0.00020053014,0.000010104239],"category_scores_gemma":[0.000045066867,0.00007959805,0.00005434457,0.00029807125,0.00009098601,0.000038851307,0.00009202958,0.00015742877,0.00001193344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00143971,0.00024901167,0.00049538293,0.000002147143,0.0000037700288,0.0007575992,0.00041265532,0.000085637694,0.9940977,0.000111421185,0.000012546719,0.0023324115],"study_design_scores_gemma":[0.0022912323,0.010727812,0.39806262,0.00019274626,0.000017088147,0.0004063144,0.001825631,0.00009506255,0.58213115,0.0017771347,0.0016591408,0.00081408845],"about_ca_topic_score_codex":0.00003584443,"about_ca_topic_score_gemma":0.00049290713,"teacher_disagreement_score":0.41196656,"about_ca_system_score_codex":0.000028728491,"about_ca_system_score_gemma":0.000017775594,"threshold_uncertainty_score":0.32459143},"labels":[],"label_agreement":null},{"id":"W2192707282","doi":"10.1016/j.pmpp.2011.09.003","title":"ANAC055 and ANAC092 contribute non-redundantly in an EIN2-dependent manner to Age-Related Resistance in Arabidopsis","year":2011,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Arizona Biomedical Research Commission; Javna Agencija za Raziskovalno Dejavnost RS; Chinese Academy of Sciences","keywords":"Biology; Jasmonic acid; Arabidopsis; Pseudomonas syringae; Mutant; Cell biology; Transcription factor; Wild type; Plant disease resistance; Genetics; Gene","score_opus":0.0204690940089867,"score_gpt":0.21609415549935543,"score_spread":0.19562506149036873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2192707282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983387,0.00052613934,0.000006025813,0.00033360548,0.000038916565,0.00025645355,0.00023205047,0.000024190738,0.00024393327],"genre_scores_gemma":[0.9986522,0.00034607662,0.00013738248,0.000648989,0.000015943417,0.000038599246,0.00011783492,0.0000014165491,0.000041564283],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99833286,0.00024976637,0.0002828517,0.0006033431,0.000092019094,0.00043914493],"domain_scores_gemma":[0.99959797,0.000077360986,0.00006076816,0.00007582107,0.000018173945,0.00016991851],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018498635,0.00020563292,0.000404734,0.00004079544,0.000071372364,0.000021911681,0.0001826603,0.00019593065,0.000032782813],"category_scores_gemma":[0.000042915683,0.000092061244,0.000038055456,0.00020108795,0.00013410235,0.000070679394,0.00012083494,0.00020127377,0.000006856452],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083221856,0.00022438499,0.010768931,0.000009759686,0.0000080828295,0.0052313213,0.00027280475,0.000010977613,0.97807914,0.0010422148,0.00003021492,0.0034899209],"study_design_scores_gemma":[0.0004476427,0.00055385544,0.9917134,0.00004743916,0.000005822846,0.00006645364,0.00007436407,0.00006326017,0.0036055439,0.0029269126,0.0002310567,0.0002642356],"about_ca_topic_score_codex":0.00024431487,"about_ca_topic_score_gemma":0.0036305666,"teacher_disagreement_score":0.98094445,"about_ca_system_score_codex":0.00001036358,"about_ca_system_score_gemma":0.0000038459266,"threshold_uncertainty_score":0.37541485},"labels":[],"label_agreement":null},{"id":"W2563674418","doi":"10.1016/j.pmpp.2016.12.005","title":"Exploring the role of DIR1, DIR1-like and other lipid transfer proteins during systemic immunity in Arabidopsis","year":2016,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Arabidopsis; Plant lipid transfer proteins; Immunity; Plant Immunity; Arabidopsis thaliana; Botany; Immune system; Immunology; Cell biology; Biochemistry; Gene; Mutant","score_opus":0.023090238129635593,"score_gpt":0.18843035618730578,"score_spread":0.16534011805767018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2563674418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983847,0.000963654,0.000010170936,0.0001397125,0.000028211985,0.00020035497,0.00018407535,0.000015767953,0.00007330958],"genre_scores_gemma":[0.99883944,0.0009577789,0.000007602106,0.00007072571,0.0000324488,0.00006790597,0.000008245411,0.0000010018338,0.000014864606],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989884,0.0002466584,0.0001864789,0.00026463275,0.00007178849,0.00024202562],"domain_scores_gemma":[0.9997062,0.00013998276,0.00003756515,0.00006148719,0.000007916331,0.000046856276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001360965,0.00013288352,0.00025399405,0.000011575909,0.000094962685,0.000007239938,0.00014255554,0.000077209275,0.0000083816485],"category_scores_gemma":[0.000019265462,0.00003639683,0.000046114164,0.000077463585,0.00019127945,0.000048874976,0.00006798416,0.00010126227,0.000002128659],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096795506,0.00004085401,0.0035598793,0.000013397691,0.000005756273,0.00004466403,0.000071335846,8.828864e-7,0.99226004,0.00058819767,6.7346394e-7,0.003317529],"study_design_scores_gemma":[0.00029527195,0.00021288212,0.78130746,0.0001583669,0.000010034103,0.0002256306,0.00020324207,0.0000047006065,0.2162292,0.0005983945,0.0005666744,0.00018814349],"about_ca_topic_score_codex":0.000060468872,"about_ca_topic_score_gemma":0.0000843909,"teacher_disagreement_score":0.7777476,"about_ca_system_score_codex":0.0000047327144,"about_ca_system_score_gemma":0.0000020629718,"threshold_uncertainty_score":0.14842196},"labels":[],"label_agreement":null},{"id":"W2583186634","doi":"10.1006/pmpp.2002.0408","title":"The root nodule–arbuscular mycorrhizae–plant pathogen relationship","year":2002,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Species evenness; Species richness; Spore; Abiotic component; Biology; Biomass (ecology); Soil biology; Soil pH; Agronomy; Ecology; Botany; Soil water","score_opus":0.019519443888304528,"score_gpt":0.19051227694111905,"score_spread":0.1709928330528145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2583186634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991202,0.0029416417,0.000036145062,0.0015342366,0.00023467079,0.00023874798,0.0018119434,0.00009122681,0.0019094038],"genre_scores_gemma":[0.9950484,0.0018890271,0.000057942372,0.0007459478,0.00016630374,0.000055214772,0.0018349473,0.0000018572919,0.0002003581],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99837285,0.0003413876,0.0002669918,0.00043689672,0.0001454771,0.0004364047],"domain_scores_gemma":[0.9978249,0.0017876421,0.00009286894,0.000117398566,0.00003464196,0.00014251379],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020964228,0.00022163123,0.00023838914,0.000013289791,0.0006400523,0.00006451774,0.0002568604,0.00019707221,0.0007514362],"category_scores_gemma":[0.00035582812,0.000073170595,0.00013700343,0.00015817548,0.00005027781,0.000056504065,0.00011803403,0.00032711556,0.00047242816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008405553,0.00015384487,0.014369044,0.000007088485,0.000029583174,0.0005766535,0.00005374805,0.000016629256,0.93712026,0.03205096,0.009971526,0.0055665886],"study_design_scores_gemma":[0.00043537858,0.002222339,0.39048228,0.00009981795,0.00017616995,0.005238928,0.0003004303,0.0054033045,0.0067211296,0.03936167,0.547839,0.0017195387],"about_ca_topic_score_codex":0.000032995405,"about_ca_topic_score_gemma":0.000045542514,"teacher_disagreement_score":0.9303992,"about_ca_system_score_codex":0.000008327455,"about_ca_system_score_gemma":0.0000020746502,"threshold_uncertainty_score":0.82276994},"labels":[],"label_agreement":null},{"id":"W2768472756","doi":"10.1006/pmpp.2000.0262","title":"COMMENTARY Salicylic acid and its role in plant defense responses: what do we really know?","year":2000,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Callose; Salicylic acid; Plant virus; Abiotic component; Defence mechanisms; Microorganism; Systemic acquired resistance; Elicitor; Virus; Bacteria; Host (biology); Plant defense against herbivory; Microbiology; Botany; Cell wall; Virology; Biochemistry; Ecology; Arabidopsis; Enzyme","score_opus":0.02536341125537929,"score_gpt":0.25210135154399876,"score_spread":0.2267379402886195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2768472756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96830696,0.025245504,1.13569335e-7,0.005078139,0.00002166014,0.0002560655,0.00095137977,0.000041429972,0.00009876396],"genre_scores_gemma":[0.88563263,0.111016594,0.000022288355,0.0028930341,0.00004877598,0.000051478368,0.0003031429,0.0000014361875,0.000030627692],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99791014,0.00060703175,0.00023632865,0.0005638729,0.00015022882,0.0005324158],"domain_scores_gemma":[0.9993679,0.0003477736,0.000042885134,0.00006582855,0.000016726655,0.00015891164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028566286,0.00024103242,0.00039831363,0.000030001656,0.00017630341,0.00006184207,0.00019723795,0.00017556788,0.00013549849],"category_scores_gemma":[0.00006495118,0.000096731565,0.000053380383,0.00014570761,0.00019408794,0.00012400214,0.00024039205,0.0002724247,0.000028388551],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006427436,0.00012237199,0.0002110806,0.0000093828785,0.000015066358,0.0011082017,0.00013171158,0.0000015692501,0.9529285,0.00018707436,0.00062754896,0.044014744],"study_design_scores_gemma":[0.0045284354,0.011221782,0.47447044,0.0012056129,0.00012272809,0.0050717234,0.0045336713,0.0010662335,0.19523112,0.029346922,0.26960322,0.0035981094],"about_ca_topic_score_codex":0.00004768908,"about_ca_topic_score_gemma":0.00014444556,"teacher_disagreement_score":0.7576974,"about_ca_system_score_codex":0.000012502301,"about_ca_system_score_gemma":0.000004687214,"threshold_uncertainty_score":0.39445987},"labels":[],"label_agreement":null},{"id":"W2917980262","doi":"10.1016/j.pmpp.2019.02.007","title":"Changes in phenylpropanoid pathway gene expression in roots and leaves of susceptible and resistant Brassica napus lines in response to Plasmodiophora brassicae inoculation","year":2019,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Clubroot; Phenylpropanoid; Biology; Brassicaceae; Brassica; Gene; Inoculation; Botany; Brassica oleracea; Gene expression; Microbiology; Genetics; Biosynthesis; Horticulture","score_opus":0.011253991769658515,"score_gpt":0.20855784791152646,"score_spread":0.19730385614186793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2917980262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792624,0.0011555706,0.0000013435354,0.00044093688,0.000018410301,0.00029920717,0.00013683244,0.000008626582,0.000012860724],"genre_scores_gemma":[0.99900687,0.0005850273,0.00014377506,0.00015499766,0.00001388642,0.00002380542,0.00006156709,0.0000013387751,0.000008744176],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998669,0.00031150325,0.00022522078,0.0004395569,0.000096531345,0.0002581677],"domain_scores_gemma":[0.99960065,0.00018231096,0.0000655783,0.0000579551,0.0000150583755,0.00007847712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023115905,0.00015572428,0.00035525416,0.000065700886,0.000026954312,0.0000125675315,0.000079112266,0.00015567683,0.0000048563024],"category_scores_gemma":[0.00007097134,0.000073208466,0.00002058255,0.00019921764,0.00007810747,0.000034514196,0.00012774067,0.000103975144,0.0000010561902],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016623338,0.00009044882,0.02953892,0.000027373017,0.0000015592988,0.00016540848,0.000077755896,0.00003385848,0.9665802,0.000032415952,0.0000037405848,0.0017859497],"study_design_scores_gemma":[0.00033376954,0.00068675977,0.7404092,0.00008964595,0.0000019369106,0.000010550783,0.000100022975,0.000053844862,0.25770622,0.00042335293,0.00005326863,0.0001314564],"about_ca_topic_score_codex":0.00003138837,"about_ca_topic_score_gemma":0.00096331554,"teacher_disagreement_score":0.71087027,"about_ca_system_score_codex":0.000009266308,"about_ca_system_score_gemma":0.000007901413,"threshold_uncertainty_score":0.29853547},"labels":[],"label_agreement":null},{"id":"W344253813","doi":"10.1006/pmpp.2001.0326","title":"A modified Rpl3 gene from rice confers tolerance of the Fusarium graminearum mycotoxin deoxynivalenol to transgenic tobacco","year":2001,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Fusarium; Mycotoxin; Gene; Agrobacterium tumefaciens; Transgene; Oryza sativa; Genetically modified crops; Genetically modified rice; Microbiology; Botany; Genetics","score_opus":0.018653207846111967,"score_gpt":0.19942393846703246,"score_spread":0.1807707306209205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W344253813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99693847,0.0004050705,0.000113963644,0.0009484029,0.00012485971,0.0004059138,0.00062836887,0.00004004248,0.0003949018],"genre_scores_gemma":[0.99714774,0.00023209896,0.0001735508,0.0020027522,0.00012941871,0.00004602404,0.00022356983,0.0000015458618,0.000043323824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998432,0.00021660814,0.00028546565,0.00051748357,0.0001669423,0.00038153463],"domain_scores_gemma":[0.9994762,0.00011336464,0.00009787742,0.00013505893,0.000046010886,0.00013148917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009547219,0.0002397502,0.00039753955,0.00001015417,0.00013468457,0.00001776639,0.00042958165,0.00022982509,0.000056626268],"category_scores_gemma":[0.000042139567,0.000077945275,0.00016959742,0.00027631858,0.00013944389,0.0000308633,0.00015581255,0.00020373512,0.000012455363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013129217,0.00013021506,0.0005150018,0.0000033799056,0.000019827652,0.000049381328,0.000061939034,0.00003655598,0.99602574,0.0005221391,0.00007566517,0.002428845],"study_design_scores_gemma":[0.00046007975,0.0009043134,0.4146772,0.000018694425,0.00004965677,0.00012835902,0.000093385235,0.00006499114,0.5767381,0.002090621,0.0043378826,0.00043671424],"about_ca_topic_score_codex":0.00007736524,"about_ca_topic_score_gemma":0.000033123044,"teacher_disagreement_score":0.41928765,"about_ca_system_score_codex":0.000007833574,"about_ca_system_score_gemma":0.0000052860732,"threshold_uncertainty_score":0.3178516},"labels":[],"label_agreement":null},{"id":"W4321019751","doi":"10.1016/j.pmpp.2023.101971","title":"A multilayer strategy is needed to uncover the clubroot pathogen mysteries","year":2023,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; BASF Schweiz; Canada Foundation for Innovation; Génome Québec","keywords":"Clubroot; Biology; Obligate; Obligate parasite; Pathogen; Biotechnology; Resistance (ecology); Host (biology); Botany; Microbiology; Genetics; Agronomy; Brassica","score_opus":0.028649338176050497,"score_gpt":0.23182726333676212,"score_spread":0.20317792516071162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321019751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99553066,0.000282524,0.000006356909,0.002709131,0.000053302934,0.00023398244,0.0009619633,0.00008000437,0.00014207688],"genre_scores_gemma":[0.9918236,0.00027164666,0.000018641818,0.0073040747,0.000081873084,0.000055744204,0.00032013742,0.0000012968719,0.00012294803],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987731,0.0001435319,0.00015913512,0.00039317962,0.00013311679,0.00039790958],"domain_scores_gemma":[0.9995894,0.00012387984,0.00003902209,0.00008365437,0.000025613024,0.00013846686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116404844,0.00017762961,0.00022171355,0.000012258962,0.00019338801,0.000042501215,0.00021307183,0.0001199127,0.00006344305],"category_scores_gemma":[0.00003480883,0.000056167453,0.00008528181,0.00025402987,0.00009712585,0.000023172379,0.00018678105,0.00009936868,0.00014157883],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084572326,0.00002789493,0.00014422693,0.000005582331,0.000011638595,0.0002892688,0.00007265345,0.000028113906,0.9890303,0.00018977266,0.0054213554,0.004694591],"study_design_scores_gemma":[0.0006948137,0.0024154976,0.75266385,0.000063419604,0.00010285345,0.0002864098,0.0024940746,0.00061470503,0.10685287,0.013889372,0.11856423,0.0013578761],"about_ca_topic_score_codex":0.000020910229,"about_ca_topic_score_gemma":0.00004915835,"teacher_disagreement_score":0.8821775,"about_ca_system_score_codex":0.0000040499685,"about_ca_system_score_gemma":0.0000057375764,"threshold_uncertainty_score":0.22904423},"labels":[],"label_agreement":null},{"id":"W4376868760","doi":"10.1016/j.pmpp.2023.102048","title":"Biocontrol of plant diseases by Bacillus spp.","year":2023,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":154,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"University of Tehran","keywords":"Biology; Rhizosphere; Biological pest control; Bacillus (shape); Biotechnology; Crop; Bacillus thuringiensis; Food security; Bacteria; Ecology; Agriculture; Microbiology","score_opus":0.014239238763835291,"score_gpt":0.20820784350572658,"score_spread":0.1939686047418913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376868760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919143,0.00044678504,0.000006026636,0.0004363162,0.00007455709,0.0001211343,0.0068478296,0.00006931917,0.000083775194],"genre_scores_gemma":[0.99601454,0.0005190156,0.000009908573,0.0004792092,0.00003132359,0.00001988952,0.002876055,7.76078e-7,0.000049301667],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990733,0.00014400619,0.00018670385,0.00026043432,0.000069797985,0.0002657457],"domain_scores_gemma":[0.9995789,0.00018787796,0.00007474277,0.000055384484,0.00002122862,0.000081860846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000076601755,0.00013674296,0.00027721754,0.000015973317,0.000105460764,0.000012098665,0.00015227044,0.000105274004,0.00012678605],"category_scores_gemma":[0.000057219924,0.00005080045,0.000086690816,0.00014200389,0.00013341925,0.000033810964,0.00012244286,0.000117868134,0.00004669335],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006800313,0.00010065623,0.00022960758,0.0000059268486,0.000014557626,0.0001027441,0.0000067348255,0.0000019146944,0.98809135,0.00016460863,0.008419841,0.0027940383],"study_design_scores_gemma":[0.0014704128,0.0039527453,0.50533086,0.00010479784,0.00013322115,0.00084098324,0.00052055775,0.00081266125,0.30431464,0.0059089656,0.17533472,0.0012754245],"about_ca_topic_score_codex":0.00007106786,"about_ca_topic_score_gemma":0.000012089532,"teacher_disagreement_score":0.68377674,"about_ca_system_score_codex":0.0000037555374,"about_ca_system_score_gemma":0.0000029277317,"threshold_uncertainty_score":0.20715822},"labels":[],"label_agreement":null},{"id":"W4402294263","doi":"10.1016/j.pmpp.2024.102393","title":"Microbial consortia mediated regulation of plant defense: A promising tool for sustaining crops protection","year":2024,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Plant defense against herbivory; Biotechnology; Defence mechanisms; Crop protection; Ecology; Environmental protection; Gene; Biochemistry","score_opus":0.021513466001534257,"score_gpt":0.2246355744669758,"score_spread":0.20312210846544154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402294263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975652,0.00023343253,0.0003936133,0.00026787852,0.000115111885,0.00043837412,0.00089666544,0.00006503223,0.00002470713],"genre_scores_gemma":[0.9984112,0.000042005413,0.00020112736,0.000098935976,0.000058720438,0.000048580652,0.0011188346,0.0000013662444,0.000019239504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906635,0.00013523798,0.00024573668,0.00029000765,0.000049570415,0.00021310165],"domain_scores_gemma":[0.9995797,0.00021770845,0.000079884776,0.000038178187,0.000052126918,0.000032344797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019297183,0.00012945021,0.00021862448,0.000023948154,0.00013571081,0.000036019836,0.00007044756,0.00015169602,0.00003681649],"category_scores_gemma":[0.00013024553,0.00005442563,0.00008484436,0.00010706175,0.00009773364,0.00005932191,0.00005208116,0.00015251672,0.000003201033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021124497,0.000049110535,0.000031259686,0.000044196353,0.00001986349,0.000035177418,0.00004320563,0.000006661828,0.9942185,0.00068932783,0.00016159238,0.004489848],"study_design_scores_gemma":[0.00086428283,0.0032931278,0.071568675,0.00044777902,0.00013831047,0.002323072,0.00035446376,0.007548095,0.8831714,0.0066519678,0.022799676,0.0008391513],"about_ca_topic_score_codex":0.000037625745,"about_ca_topic_score_gemma":0.00001762638,"teacher_disagreement_score":0.11104711,"about_ca_system_score_codex":0.000012107614,"about_ca_system_score_gemma":0.000010557877,"threshold_uncertainty_score":0.22194128},"labels":[],"label_agreement":null},{"id":"W4408606496","doi":"10.1016/j.pmpp.2025.102672","title":"Outstanding biocontrol and plant growth promotion traits of Pseudomonas fluorescens UM270 and other plant-associated Pseudomonas","year":2025,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Biology; Pseudomonas fluorescens; Pseudomonas; Plant growth; Biological pest control; Pseudomonadales; Pseudomonadaceae; Botany; Biotechnology; Bacteria; Genetics","score_opus":0.0180236179588518,"score_gpt":0.22277350559397596,"score_spread":0.20474988763512417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408606496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967944,0.00051985396,0.00003033033,0.00044285177,0.00006060276,0.00025511335,0.0016660045,0.000038886126,0.000191944],"genre_scores_gemma":[0.9987306,0.0004265831,0.00005606231,0.0004315478,0.000021029444,0.000018073817,0.0002942857,0.0000014064701,0.00002039696],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987017,0.00026506267,0.00028301877,0.00038140803,0.000073581934,0.0002952234],"domain_scores_gemma":[0.99948317,0.000229182,0.00013067946,0.000042823696,0.00003884537,0.00007529094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019912272,0.0002133483,0.00042478685,0.000039620365,0.00019218642,0.000030915726,0.000110351786,0.00022279982,0.000018971936],"category_scores_gemma":[0.000108315384,0.000092024915,0.000066010856,0.0001193009,0.00021852377,0.000052372,0.00012317284,0.00021459165,0.0000010852178],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016592034,0.00020553211,0.0023783578,0.000022573759,0.000049430655,0.000056813285,0.000050187286,4.0368585e-7,0.9925306,0.0027027028,0.0001386261,0.0016988823],"study_design_scores_gemma":[0.0020478053,0.0025829067,0.80221474,0.00040953487,0.00018020677,0.000970893,0.000370119,0.0004980533,0.17946875,0.009066638,0.0014354062,0.00075495406],"about_ca_topic_score_codex":0.00011449362,"about_ca_topic_score_gemma":0.00008688307,"teacher_disagreement_score":0.81306183,"about_ca_system_score_codex":0.000010400197,"about_ca_system_score_gemma":0.0000059060535,"threshold_uncertainty_score":0.3752667},"labels":[],"label_agreement":null},{"id":"W4409709055","doi":"10.1016/j.pmpp.2025.102713","title":"Mango Tree Sudden Decline disease: 65-years global perspective of ecology, biology, epidemiology, and management - Challenge of tropical landscape pathology","year":2025,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Office of Research, Innovation and Commercialization, University of Agriculture Faisalabad; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Universidad Francisco de Vitoria; Bahauddin Zakariya University","keywords":"Biology; Ecology; Tree (set theory); Perspective (graphical); Disease; Pathology","score_opus":0.015307904891277563,"score_gpt":0.279375064986329,"score_spread":0.2640671600950515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409709055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9796328,0.0147134885,0.0008398732,0.00085489755,0.000099847275,0.00035301613,0.0022616375,0.000018556591,0.001225888],"genre_scores_gemma":[0.98880213,0.008642012,0.000932763,0.00088453456,0.000043615215,0.00005816548,0.0006093689,0.000008552606,0.000018862082],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99763304,0.00056581537,0.00047303838,0.0008312202,0.0000586129,0.0004382664],"domain_scores_gemma":[0.99911183,0.00011412504,0.00018741182,0.00034391822,0.00007371222,0.000169024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024243604,0.00029527547,0.00074914546,0.000095806114,0.00005695974,0.000003404727,0.00025436305,0.00040463966,0.000009521582],"category_scores_gemma":[0.0003218945,0.00023956443,0.00018260826,0.00011145797,0.000950642,0.000004090047,0.00072512304,0.00013358823,0.0000012246303],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025119388,0.000929353,0.19183429,0.00032977725,0.0005479017,0.0010030351,0.000027728702,0.000026113874,0.50853014,0.2893479,0.00066852703,0.004243291],"study_design_scores_gemma":[0.0012350077,0.0012174555,0.9620315,0.000036428108,0.000209962,0.000091811795,0.000114039525,0.000060771872,0.00088307797,0.033183478,0.0006739269,0.00026253483],"about_ca_topic_score_codex":0.000011136098,"about_ca_topic_score_gemma":0.000034399058,"teacher_disagreement_score":0.7701972,"about_ca_system_score_codex":0.000012200905,"about_ca_system_score_gemma":0.000038483504,"threshold_uncertainty_score":0.97691536},"labels":[],"label_agreement":null},{"id":"W4411078979","doi":"10.1016/j.pmpp.2025.102783","title":"Development of a rapid screen to identify formulations that enhance plant resistance to viral infection","year":2025,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Suncor Energy (Canada); Centennial College; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; McMaster University","keywords":"Biology; Resistance (ecology); Viral infection; Virology; Biotechnology; Computational biology; Virus; Ecology","score_opus":0.040075312173168905,"score_gpt":0.30441642764047766,"score_spread":0.26434111546730876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411078979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971672,0.00016782487,0.0008862008,0.0005839742,0.000039935974,0.00033303702,0.00050098496,0.000032910633,0.00028790807],"genre_scores_gemma":[0.9969974,0.00011525055,0.001814045,0.00067587936,0.000017274213,0.00008346189,0.00022450193,5.733183e-7,0.00007162321],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988696,0.00010884333,0.00021850938,0.00036486352,0.00013905585,0.0002991283],"domain_scores_gemma":[0.9996272,0.00013289883,0.000050332885,0.00005628554,0.000043170065,0.00009014657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019693103,0.00013846789,0.0002713071,0.00004294665,0.00021147764,0.00001619055,0.00015007629,0.00008530499,0.000016391334],"category_scores_gemma":[0.00013144454,0.0000587902,0.000047683727,0.00024138558,0.00006195256,0.00003535869,0.00030456815,0.000097832395,0.000012409553],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015224385,0.00005481967,0.00024015096,0.000013451931,0.000019828354,0.000020616368,0.00006533318,0.0000046294626,0.99001235,0.0009102775,0.00076786097,0.0077384226],"study_design_scores_gemma":[0.00009411975,0.00024465553,0.5383372,0.000070010865,0.000008257179,0.000004935346,0.000028528777,0.000008042199,0.44658482,0.0012609736,0.013191984,0.0001664801],"about_ca_topic_score_codex":0.000026566806,"about_ca_topic_score_gemma":0.0005105101,"teacher_disagreement_score":0.5434275,"about_ca_system_score_codex":0.000016600376,"about_ca_system_score_gemma":0.000010114134,"threshold_uncertainty_score":0.23973948},"labels":[],"label_agreement":null},{"id":"W4412495607","doi":"10.1016/j.pmpp.2025.102840","title":"MicroRNAs associated with spot blotch in bread wheat (Triticum aestivum)","year":2025,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Science and Engineering Research Board","keywords":"Biology; microRNA; Poaceae; Botany; Leaf spot; Agronomy; Biotechnology; Horticulture; Genetics; Gene","score_opus":0.009295003543685376,"score_gpt":0.20092877191349906,"score_spread":0.1916337683698137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412495607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971848,0.0012674942,0.000012121374,0.0006518608,0.000030789302,0.00016350659,0.00024029487,0.00003767927,0.00041144138],"genre_scores_gemma":[0.9981698,0.0002303748,0.00002693738,0.0010752648,0.000012862097,0.000024016976,0.00038341896,7.2124107e-7,0.00007659678],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988784,0.00015537247,0.00016137697,0.00038620838,0.00006914405,0.00034950284],"domain_scores_gemma":[0.999668,0.0001551235,0.000040596093,0.000047990525,0.000027085143,0.00006120123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009067705,0.00016933981,0.0002945853,0.00002045252,0.00007974612,0.000014618317,0.00013016512,0.00016243814,0.000018824625],"category_scores_gemma":[0.000056481716,0.00006451475,0.000045814824,0.00023774772,0.0001385038,0.000020900867,0.00007023379,0.00014630526,0.000004896499],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012883892,0.00020984151,0.006420183,0.00000905857,0.000016713335,0.0007332907,0.0000063362354,0.00000832579,0.99011844,0.0004259836,0.00024359883,0.00167939],"study_design_scores_gemma":[0.0005761615,0.0004301031,0.961444,0.00014266043,0.00003497429,0.00006581616,0.000046250516,0.000036415302,0.03340515,0.0026509867,0.0008898471,0.0002776101],"about_ca_topic_score_codex":0.000019739835,"about_ca_topic_score_gemma":0.00022745256,"teacher_disagreement_score":0.9567133,"about_ca_system_score_codex":0.0000118136095,"about_ca_system_score_gemma":0.000010413282,"threshold_uncertainty_score":0.26308352},"labels":[],"label_agreement":null},{"id":"W4412828196","doi":"10.1016/j.pmpp.2025.102850","title":"Bioprotective and biofertilizing effects of bacteria isolated from the melon rhizosphere: A sustainable strategy for controlling fusarium wilt and enhancing melon yield and quality","year":2025,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Espace pour la vie","funders":"","keywords":"Melon; Biology; Rhizosphere; Fusarium wilt; Yield (engineering); Fusarium oxysporum; Bacteria; Horticulture; Botany; Agronomy","score_opus":0.01711006094035158,"score_gpt":0.2377835444859638,"score_spread":0.22067348354561223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412828196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99627495,0.00235586,0.0003952904,0.00030687248,0.000037421996,0.00044967065,0.00014771621,0.000016113236,0.000016084305],"genre_scores_gemma":[0.9990769,0.00039300654,0.00007094512,0.0003212861,0.000015441035,0.000036325127,0.00007161619,8.12586e-7,0.000013685999],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900746,0.00021728268,0.00020962085,0.00031371473,0.00003012576,0.00022177659],"domain_scores_gemma":[0.9984713,0.0012817763,0.00010037013,0.000048751397,0.000053599855,0.00004418442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022004513,0.00014962655,0.00034758757,0.000009059594,0.00027537238,0.000046313697,0.00007192234,0.00015801137,0.000004809831],"category_scores_gemma":[0.0003422132,0.00005753291,0.00003810106,0.00007280262,0.00016348484,0.000055779215,0.0001415088,0.00015767354,9.079935e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047923476,0.000039331488,0.00026662482,0.00005805012,0.00004007624,0.000010555544,0.00006437615,6.324267e-7,0.9948211,0.00072310236,0.000004755673,0.0034922042],"study_design_scores_gemma":[0.00079890195,0.0015382126,0.32115316,0.00016608318,0.00009170958,0.00003301376,0.0015291062,0.00029060096,0.66573447,0.008230672,0.00017215023,0.00026194606],"about_ca_topic_score_codex":0.0013316612,"about_ca_topic_score_gemma":0.00021947658,"teacher_disagreement_score":0.3290866,"about_ca_system_score_codex":0.000005658889,"about_ca_system_score_gemma":0.000006678112,"threshold_uncertainty_score":0.2346124},"labels":[],"label_agreement":null},{"id":"W4412890179","doi":"10.1016/j.pmpp.2025.102867","title":"Analysis of novel volatile compounds, plant-beneficial traits, and genomic features of the endophyte Bacillus velezensis ITCE1 and its crosstalk with Trichoderma","year":2025,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Tecnológico Nacional de México","keywords":"Biology; Endophyte; Crosstalk; Trichoderma; Botany; Biotechnology","score_opus":0.013835588726176911,"score_gpt":0.210377469062594,"score_spread":0.1965418803364171,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412890179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99669105,0.0010573692,0.000019435205,0.00015196925,0.000024276469,0.00013365893,0.0018202835,0.000008306163,0.00009368217],"genre_scores_gemma":[0.9992708,0.00028509286,0.000058296602,0.00021194809,0.0000093011495,0.000005461518,0.00013607052,6.5764686e-7,0.000022355704],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99920523,0.00010409841,0.00020234447,0.00026374275,0.000060224647,0.00016433017],"domain_scores_gemma":[0.9995284,0.00021959441,0.00012617321,0.000046948226,0.000044044034,0.000034847264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007232766,0.00014726681,0.00041760757,0.0000390029,0.00016339845,0.000017286697,0.00012927364,0.00010941795,0.0000087908375],"category_scores_gemma":[0.000028550403,0.000051981773,0.000082634826,0.00028203387,0.0001986344,0.00002861993,0.0001543908,0.00015066874,7.8399374e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002094483,0.00010694235,0.0011472277,0.000014642235,0.00016582927,0.000008455278,0.000045826273,0.00003110861,0.99559224,0.0004042463,0.000029554776,0.0022444564],"study_design_scores_gemma":[0.00032849162,0.00026341755,0.96113473,0.000025747642,0.00024515996,0.00013681891,0.00010191828,0.00063360506,0.03665613,0.000078986195,0.00027395698,0.00012104941],"about_ca_topic_score_codex":0.000098911885,"about_ca_topic_score_gemma":0.00020330465,"teacher_disagreement_score":0.9599875,"about_ca_system_score_codex":0.000003778905,"about_ca_system_score_gemma":0.00000692909,"threshold_uncertainty_score":0.21197551},"labels":[],"label_agreement":null},{"id":"W4417138099","doi":"10.1016/j.pmpp.2025.103081","title":"Elsinoё spp. and elsinochromes: Phytotoxins of the scab-causing fungus Elsinoë spp. in cassava superelongation disease","year":2025,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Fungus; Phytotoxin; Host (biology); Disease; Necrosis; Crop","score_opus":0.012406129538908198,"score_gpt":0.21573328937265615,"score_spread":0.20332715983374794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417138099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99531513,0.0033072627,0.000008523294,0.00060626963,0.000058759062,0.0002318751,0.00030666357,0.000015113122,0.00015040518],"genre_scores_gemma":[0.9983223,0.00083357986,0.00002593749,0.00063592807,0.000025150524,0.000013262545,0.00010901702,8.273783e-7,0.000034010074],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99884886,0.00020270549,0.00022120404,0.0003639891,0.000102901264,0.0002603697],"domain_scores_gemma":[0.9996289,0.00011357018,0.000065478955,0.00008260306,0.000026886422,0.000082578146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009979077,0.00016296857,0.00026976928,0.000021073829,0.00011998011,0.000018265328,0.000118566895,0.00011792369,0.000016686061],"category_scores_gemma":[0.000071823204,0.00006250319,0.000071518814,0.00022727094,0.0002443202,0.000034367353,0.00015609692,0.00012628113,0.000001296912],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101510464,0.00012592065,0.014232795,0.00004249125,0.000010310677,0.00016242127,0.000016429387,0.000015992,0.98199517,0.0006860802,0.00008133405,0.0025295496],"study_design_scores_gemma":[0.00022970368,0.00008766503,0.97823477,0.00009861116,0.00003375973,0.000027302427,0.000054027565,0.00013015035,0.015507502,0.004999984,0.00044963567,0.00014688775],"about_ca_topic_score_codex":0.00002549376,"about_ca_topic_score_gemma":0.00011106877,"teacher_disagreement_score":0.96648765,"about_ca_system_score_codex":0.0000100861225,"about_ca_system_score_gemma":0.000016857446,"threshold_uncertainty_score":0.2548806},"labels":[],"label_agreement":null},{"id":"W881629181","doi":"10.1016/j.pmpp.2015.05.006","title":"Comparative expression of genes controlling cell wall-degrading enzymes in Verticillium dahliae isolates from olive, potato and sunflower","year":2015,"lang":"en","type":"article","venue":"Physiological and Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Verticillium dahliae; Biology; Sunflower; Gene; Verticillium wilt; Enzyme; Microbiology; Botany; Genetics; Biochemistry; Horticulture","score_opus":0.035031795782944165,"score_gpt":0.23357007315861092,"score_spread":0.19853827737566676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W881629181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99549717,0.0040162345,0.000018343551,0.000068404035,0.000047702066,0.00010386393,0.00015688667,0.000013526019,0.00007785057],"genre_scores_gemma":[0.9990244,0.000432397,0.00018591956,0.00016255333,0.000018844348,0.000008143617,0.00016156663,7.047107e-7,0.0000054539573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906045,0.00022250933,0.00021246295,0.000259735,0.000049838352,0.00019497376],"domain_scores_gemma":[0.9995058,0.00025106128,0.00008411434,0.000040409344,0.000037891634,0.00008068555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009601524,0.0001419236,0.0003693291,0.00001635543,0.000061721854,0.00001603743,0.0000978456,0.00011075356,0.000018533025],"category_scores_gemma":[0.000030468658,0.00005681971,0.000038571197,0.00005756453,0.00010664371,0.00006337088,0.000102571736,0.00014930246,0.0000026987882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017992067,0.00011604489,0.002409798,0.000003578992,0.0000059928116,0.000036070072,0.00020877013,0.000024807303,0.9966781,0.0000550747,0.000043605476,0.0002382028],"study_design_scores_gemma":[0.00063286023,0.00061046385,0.06845263,0.000063511194,0.000016787366,0.00003800485,0.000847734,0.0009960615,0.92654085,0.0011273946,0.00045104677,0.00022265968],"about_ca_topic_score_codex":0.00040118612,"about_ca_topic_score_gemma":0.00008031619,"teacher_disagreement_score":0.070137285,"about_ca_system_score_codex":0.000006309075,"about_ca_system_score_gemma":0.000003885956,"threshold_uncertainty_score":0.23170406},"labels":[],"label_agreement":null}]}