{"meta":{"query_hash":"32d025fd7d65","filters":{"venue":"Seibutsu Butsuri"},"cohort_total":19,"direct_labels_cover":0,"predictions_cover":19,"exported":19,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/32d025fd7d65","api":"https://metacan.xera.ac/api/v1/cohort?venue=Seibutsu+Butsuri"},"results":[{"id":"W1570564694","doi":"10.2142/biophys.46.s222_1","title":"1P301 ε Subunit Stops Rotation of Thermophilic F1-ATPase; Single Molecular Analysis of the inhibition by the ε subunit(9. Molecular motor (I),Poster Session,Abstract,Meeting Program of EABS &amp; BSJ 2006)","year":2006,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"ATP Synthase and ATPases Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Paul University","funders":"","keywords":"Protein subunit; Molecular motor; Session (web analytics); ATPase; Rotation (mathematics); Thermophile; Chemistry; Biophysics; Biochemistry; Biology; Computer science; Gene; Enzyme; Artificial intelligence","score_opus":0.011505982823154442,"score_gpt":0.2691285426941519,"score_spread":0.2576225598709974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1570564694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962231,0.0004268125,0.0014420785,0.00015989221,0.000051835494,0.00001189054,0.0002880465,0.000071412134,0.0013249364],"genre_scores_gemma":[0.99686664,0.00019582486,0.0007056549,0.0000603532,0.000011536551,0.000014928667,0.00033302006,0.000034421355,0.0017776795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998987,0.000008511864,0.000009442427,0.00002869709,0.000025324054,0.00002946997],"domain_scores_gemma":[0.9998803,0.000025506488,0.000028810335,0.000016038364,0.000010718633,0.000038531387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000115621384,0.00027725697,0.00026045425,0.000121910656,0.00017186397,0.00025099216,0.00033539443,0.0003119388,0.0024729217],"category_scores_gemma":[0.00021867863,0.00020750961,0.00017925157,0.00008567675,0.0002824474,0.00019706397,0.00012833659,0.0005828511,0.00070862053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027973816,0.00003609334,0.00027611814,0.00003820591,0.0000055668825,0.00014166332,0.000013277897,0.0000706949,0.9977228,0.0002690311,0.0001447587,0.0010019859],"study_design_scores_gemma":[0.000029341405,0.0001245248,0.004404022,0.0000055428254,0.000010474509,0.00021587747,0.000016894146,0.0019181132,0.9922863,0.000049721566,0.00093431456,0.000004783658],"about_ca_topic_score_codex":0.001086679,"about_ca_topic_score_gemma":0.000835968,"teacher_disagreement_score":0.0024729217,"about_ca_system_score_codex":0.00031639618,"about_ca_system_score_gemma":0.00024005324,"threshold_uncertainty_score":0.008272707},"labels":[],"label_agreement":null},{"id":"W2610759138","doi":"10.2142/biophys.50.s65_2","title":"1P258 FTIR study of a new fungal rhodopsin(Photobiology:Vision &amp; Photoreception,The 48th Annual Meeting of the Biophysical Society of Japan)","year":2010,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Photobiology; Rhodopsin; Fourier transform infrared spectroscopy; Biophysics; Biology; Optics; Biochemistry; Botany; Physics; Retinal","score_opus":0.03947440079784338,"score_gpt":0.32878550231737586,"score_spread":0.2893111015195325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610759138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99299777,0.0019060381,0.0029413903,0.00016523473,0.000044608205,0.000008475703,0.00015936179,0.000019131321,0.0017579293],"genre_scores_gemma":[0.9936777,0.0009087964,0.0026954974,0.000069145695,0.000021479169,0.0000046642886,0.00024334782,0.000015640771,0.0023638075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999405,0.000005147332,0.0000024826602,0.00001965429,0.000019614614,0.000012502335],"domain_scores_gemma":[0.9999454,0.000012032522,0.000011753273,0.0000033412152,0.000011992415,0.000015434365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010514975,0.00026086456,0.00012423946,0.00022320154,0.00029660284,0.00016225454,0.00027151834,0.00031294415,0.001222642],"category_scores_gemma":[0.00009013544,0.00010034149,0.0002198364,0.00012286939,0.00023970607,0.00046486533,0.00016292116,0.00044416334,0.00020083769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003771694,0.000010056761,0.00010784069,0.00001720144,0.0000023906957,0.00011180916,0.000026416912,0.000022096843,0.998818,0.000048943075,0.00004071536,0.0007567562],"study_design_scores_gemma":[0.000009534883,0.00022726523,0.0071328147,0.0000080552545,0.000023546843,0.00062557514,0.00018464871,0.000985282,0.9883366,0.000060947503,0.0023943302,0.000011313597],"about_ca_topic_score_codex":0.00079958927,"about_ca_topic_score_gemma":0.0007019489,"teacher_disagreement_score":0.001222642,"about_ca_system_score_codex":0.000086449756,"about_ca_system_score_gemma":0.000087371925,"threshold_uncertainty_score":0.0040901303},"labels":[],"label_agreement":null},{"id":"W2610784105","doi":"10.2142/biophys.54.s137_3","title":"3SBA-05 Is enzyme evolution reversible? Exploring fitness landscapes by laboratory evolution(Rise of molecular machines,Symposium,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))","year":2014,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Evolutionary biology; Biology","score_opus":0.004169605084037357,"score_gpt":0.20277921711223146,"score_spread":0.1986096120281941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610784105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9125803,0.0014785096,0.04804662,0.0017451198,0.00038815144,0.00004495328,0.0029653106,0.002511839,0.030239172],"genre_scores_gemma":[0.9736192,0.000298295,0.017989364,0.00015912768,0.000026477132,0.000036667105,0.002111959,0.00034172664,0.005417195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979323,0.000054078177,0.000010467688,0.000058010442,0.00004520901,0.000038981227],"domain_scores_gemma":[0.99969935,0.00008254675,0.000029346316,0.000086322165,0.000048013593,0.000054419088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053429726,0.00029269062,0.0006323879,0.0003253837,0.0005391054,0.001354399,0.00084786257,0.00070164964,0.01147302],"category_scores_gemma":[0.0010252822,0.00024008483,0.0006078068,0.00031970855,0.0004858611,0.0005963731,0.00058611005,0.0006913086,0.0016427251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022695742,0.00066667126,0.026892895,0.00053030706,0.0002927659,0.0008585163,0.00022526176,0.048046354,0.601103,0.16904728,0.018586233,0.1314811],"study_design_scores_gemma":[0.000261541,0.00069313566,0.017141506,0.000061744955,0.00011179758,0.0011281274,0.00016236414,0.5774892,0.28265503,0.08463062,0.035543196,0.000121750294],"about_ca_topic_score_codex":0.001690318,"about_ca_topic_score_gemma":0.0021052063,"teacher_disagreement_score":0.01147302,"about_ca_system_score_codex":0.0006721616,"about_ca_system_score_gemma":0.0005383947,"threshold_uncertainty_score":0.0383811},"labels":[],"label_agreement":null},{"id":"W2610896184","doi":"10.2142/biophys.40.s7_4","title":"Surface dynamics and Hydration of Calmodulin2 : Methionine residues","year":2000,"lang":"fr","type":"article","venue":"Seibutsu Butsuri","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Methionine; Dynamics (music); Chemistry; Biophysics; Biochemistry; Biology; Amino acid; Physics; Acoustics","score_opus":0.008849773598934131,"score_gpt":0.23820227663320132,"score_spread":0.22935250303426719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610896184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987947,0.000084982945,0.00072827225,0.00004792588,0.000005314393,0.0000015787804,0.000017248201,0.000009105438,0.00031093563],"genre_scores_gemma":[0.9993261,0.000057967583,0.00019467965,0.000010425883,0.0000031480813,0.0000023611567,0.000071524526,0.000009026947,0.0003247619],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999727,0.0000022757022,6.308618e-7,0.0000075892985,0.0000060796488,0.0000106997695],"domain_scores_gemma":[0.99994504,0.000015431975,0.000010238018,0.000003637009,0.000008086598,0.000017497494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006448727,0.00020926404,0.00014800603,0.0000880951,0.00040458562,0.00021812058,0.00032163213,0.00022552707,0.0011683778],"category_scores_gemma":[0.00024578485,0.00011911771,0.000115811505,0.000105571824,0.0003052063,0.0003914077,0.00022444355,0.0004356727,0.00010292492],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005997628,0.000062343126,0.0052234475,0.00007848284,0.0000381461,0.00043052956,0.0005177615,0.0026780737,0.98242605,0.0023667747,0.0005514763,0.005027193],"study_design_scores_gemma":[0.00013569806,0.00050196995,0.06082336,0.000021860847,0.00007315867,0.00051276427,0.00096720475,0.16170138,0.76919824,0.0022400678,0.0037494125,0.000074930875],"about_ca_topic_score_codex":0.003216365,"about_ca_topic_score_gemma":0.001929112,"teacher_disagreement_score":0.003216365,"about_ca_system_score_codex":0.00030890477,"about_ca_system_score_gemma":0.00015284921,"threshold_uncertainty_score":0.0063952804},"labels":[],"label_agreement":null},{"id":"W2610917923","doi":"10.2142/biophys.52.s154_3","title":"3PS047 Fabrication of Superparamagnetic Janus Particles Having Various Sizes and Its Application for Non-Destructive Cell Sorting(The 50th Annual Meeting of the Biophysical Society of Japan)","year":2012,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Algal biology and biofuel production","field":"Energy","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kootenay Association for Science & Technology","funders":"","keywords":"Janus; Sorting; Superparamagnetism; Nanotechnology; Fabrication; Materials science; Computer science; Physics; Medicine; Pathology","score_opus":0.009088127226717096,"score_gpt":0.22445922766123733,"score_spread":0.21537110043452024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610917923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91515917,0.0025841817,0.06666696,0.00050761306,0.00023317133,0.00012478691,0.00025755225,0.0003989892,0.01406763],"genre_scores_gemma":[0.9102977,0.0012301563,0.06773126,0.00019619812,0.000041449413,0.00013048814,0.0004642176,0.00009366317,0.01981487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991715,0.000008292279,0.0000069263374,0.000021102562,0.000035615652,0.0000108625645],"domain_scores_gemma":[0.9999486,0.000008610017,0.00001147159,0.000009808429,0.000013020254,0.000008566705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016935519,0.00020485371,0.00012498902,0.00021237847,0.00021612513,0.00029273497,0.0001888295,0.0002739261,0.0014431071],"category_scores_gemma":[0.000086306194,0.00016343416,0.00016641966,0.00008150922,0.00019816417,0.00022473028,0.00021567348,0.00027428908,0.00067438197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009185732,0.000008545639,0.00004121729,0.000017534512,0.0000015804029,0.000027525719,0.000010114081,0.000052714953,0.99636203,0.0003720456,0.000094967574,0.0030025365],"study_design_scores_gemma":[0.0000053244135,0.00004458034,0.00033682634,0.0000024599078,0.0000032355792,0.000099391546,0.000008172236,0.0012427671,0.9927817,0.00007296935,0.0053995335,0.0000030959088],"about_ca_topic_score_codex":0.00023126134,"about_ca_topic_score_gemma":0.0006276904,"teacher_disagreement_score":0.0014431071,"about_ca_system_score_codex":0.00021366496,"about_ca_system_score_gemma":0.00016988585,"threshold_uncertainty_score":0.004827738},"labels":[],"label_agreement":null},{"id":"W2610922306","doi":"10.2142/biophys.51.s25_6","title":"2SQ-03 Mechanosensitive nucleotide release in the lung(2SQ Developing Mechanobiology:from fundamentals to medical applications,The 49th Annual Meeting of the Biophysical Society of Japan)","year":2011,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Medical Imaging and Pathology Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Mechanosensitive channels; Mechanobiology; Biology; Cell biology; Biochemistry; Ion channel","score_opus":0.027490434342722834,"score_gpt":0.28725866600302935,"score_spread":0.2597682316603065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610922306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4727144,0.21553908,0.13044688,0.048514616,0.04271643,0.0007594016,0.0017267227,0.001257015,0.08632546],"genre_scores_gemma":[0.6484998,0.057926517,0.0450045,0.006430812,0.022342477,0.000435087,0.0017590894,0.00037801804,0.2172237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998258,0.000035089783,0.000011996253,0.000052559433,0.000039100592,0.000035489764],"domain_scores_gemma":[0.99986243,0.000024928328,0.000009455385,0.000007801321,0.000035227506,0.000060139493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010395987,0.00047264082,0.00032540574,0.0005702314,0.00041531198,0.00047940598,0.000602742,0.00079633377,0.009399021],"category_scores_gemma":[0.0002481707,0.00023647446,0.00048076923,0.00022302262,0.0006253076,0.0005824962,0.0009181341,0.001115958,0.0016672688],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020063662,0.00043493454,0.0032784264,0.00070196117,0.00008421899,0.0030883965,0.0005118964,0.00073322834,0.7197261,0.020794699,0.07212449,0.17651528],"study_design_scores_gemma":[0.00042396795,0.001705788,0.027140094,0.00014626201,0.00013923025,0.006592345,0.00020008472,0.0081747295,0.59300655,0.0063744993,0.3559743,0.0001221854],"about_ca_topic_score_codex":0.0014420486,"about_ca_topic_score_gemma":0.0016879211,"teacher_disagreement_score":0.009399021,"about_ca_system_score_codex":0.0004412342,"about_ca_system_score_gemma":0.0006184619,"threshold_uncertainty_score":0.03144288},"labels":[],"label_agreement":null},{"id":"W2611067946","doi":"10.2142/biophys.49.s110_1","title":"2P-024 Molecular interactions of CD28 cytoplasmic domains with Grb2 and Gads using their SH3-deficient mutants(Protein:Structure &amp; Function,The 47th Annual Meeting of the Biophysical Society of Japan)","year":2009,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Mutant; SH3 domain; GRB2; Cytoplasm; Function (biology); Cell biology; Chemistry; Signal transducing adaptor protein; Biology; Biophysics; Genetics; Proto-oncogene tyrosine-protein kinase Src; Signal transduction; Gene","score_opus":0.008124324630005859,"score_gpt":0.2442863092171783,"score_spread":0.23616198458717244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611067946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99519014,0.0006050665,0.0012610572,0.00030824827,0.0000661372,0.000021315265,0.00033616615,0.000028993847,0.0021829403],"genre_scores_gemma":[0.99181527,0.00032323063,0.0017420565,0.00010952186,0.000019146608,0.000036508347,0.00132226,0.00003003215,0.0046019536],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983144,0.000031770556,0.000012289499,0.00003085728,0.000041174775,0.000052519543],"domain_scores_gemma":[0.99991953,0.000019199897,0.00001075641,0.000012209843,0.0000072417406,0.00003109403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020296451,0.0005088918,0.00028138785,0.00021407689,0.0003693468,0.00032452279,0.00051863905,0.00031749424,0.0027420667],"category_scores_gemma":[0.0001449627,0.00021550001,0.00034315718,0.0002261004,0.0003463107,0.00023752701,0.0003867235,0.0009048907,0.0006578499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037323992,0.00008275949,0.0003247122,0.000037628404,0.00001812815,0.00021170391,0.000027576776,0.00010964949,0.99716264,0.00056171895,0.00023384261,0.0008562185],"study_design_scores_gemma":[0.00013212992,0.00014698411,0.0044681355,0.000008796292,0.00002594629,0.00053020945,0.00006038956,0.0026796048,0.9871597,0.00012322149,0.0046558576,0.000009119461],"about_ca_topic_score_codex":0.0014159199,"about_ca_topic_score_gemma":0.0020018895,"teacher_disagreement_score":0.0027420667,"about_ca_system_score_codex":0.00063176046,"about_ca_system_score_gemma":0.00033958285,"threshold_uncertainty_score":0.009173095},"labels":[],"label_agreement":null},{"id":"W2611147283","doi":"10.2142/biophys.52.s85_3","title":"1PT101 The crystal structures of hemoglobin from the woolly mammoth in liganded and unliganded states(The 50th Annual Meeting of the Biophysical Society of Japan)","year":2012,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Hemoglobin structure and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Mammoth; Crystal (programming language); Hemoglobin; Crystallography; Chemistry; Geology; Paleontology; Biochemistry; Computer science","score_opus":0.005229875770417703,"score_gpt":0.2108567568946262,"score_spread":0.20562688112420852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611147283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9566096,0.004510828,0.006709753,0.0014022427,0.0003022807,0.000056794426,0.011384165,0.00057634455,0.018448079],"genre_scores_gemma":[0.8337065,0.004413631,0.025356898,0.0007019571,0.00007178059,0.00009877119,0.09500693,0.00033606953,0.04030753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995303,0.0000034914665,0.000002186219,0.000011433686,0.000022836415,0.0000070429214],"domain_scores_gemma":[0.99995196,0.000008486654,0.000010403957,0.0000028478014,0.000010657397,0.000015726551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006760179,0.000247128,0.00024480865,0.00023387969,0.00038950823,0.00044859663,0.00045197495,0.0003601721,0.0076176086],"category_scores_gemma":[0.00018524729,0.00019862042,0.00016033546,0.0004437431,0.00014402291,0.00035371297,0.00018285222,0.0008281139,0.0010577972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058816565,0.00034847332,0.008281432,0.0007577234,0.00010164854,0.0011345778,0.0005151,0.0020142717,0.8811299,0.005497896,0.04067017,0.058960505],"study_design_scores_gemma":[0.00039823676,0.0008284309,0.20369412,0.00018922625,0.00028308242,0.0032624302,0.0011176434,0.068661936,0.38036445,0.0035293652,0.33752745,0.00014368593],"about_ca_topic_score_codex":0.00776695,"about_ca_topic_score_gemma":0.013075603,"teacher_disagreement_score":0.00776695,"about_ca_system_score_codex":0.0006857789,"about_ca_system_score_gemma":0.00040009432,"threshold_uncertainty_score":0.025483489},"labels":[],"label_agreement":null},{"id":"W2611163375","doi":"10.2142/biophys.50.s183_1","title":"3P215 Complex Chemical Physics XXXVIII : The lamellar - vesicle transition of Multilamellar Vesicle in sine oscillatory shear flow(Cell biology,The 48th Annual Meeting of the Biophysical Society of Japan)","year":2010,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Hemoglobin structure and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Vesicle; Sine; Lamellar structure; Shear flow; Shear (geology); Biophysics; Materials science; Physics; Biology; Nanotechnology; Chemical physics; Chemistry; Mechanics; Crystallography; Paleontology; Biochemistry; Geometry; Membrane; Mathematics","score_opus":0.006594850930974741,"score_gpt":0.21801490944470767,"score_spread":0.2114200585137329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611163375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89067405,0.0051258435,0.020501882,0.002298154,0.0016606766,0.00008363692,0.00047743384,0.00052165036,0.07865663],"genre_scores_gemma":[0.963198,0.0009978114,0.0017017106,0.00021058328,0.00011867077,0.000035039953,0.00046158535,0.00008936578,0.033187207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999664,0.0000023622777,5.903774e-7,0.000010432106,0.000009800122,0.0000104982955],"domain_scores_gemma":[0.9999777,0.0000036944466,0.0000035094358,0.0000017941941,0.0000033115257,0.00001005792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006459165,0.0001663727,0.0001245386,0.00027035593,0.0007624861,0.0008222535,0.00029484354,0.00031989542,0.009357124],"category_scores_gemma":[0.00014908094,0.00010968479,0.00015142495,0.0001341684,0.00038703624,0.00047682214,0.00030774338,0.0004929138,0.00083230424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006251407,0.00030139598,0.0027478372,0.00026061718,0.00007602721,0.0017984317,0.0005585363,0.0049288664,0.6469174,0.2753612,0.02415177,0.04227283],"study_design_scores_gemma":[0.00021451186,0.00046713912,0.02804033,0.00007055804,0.000054479984,0.0012800161,0.00050603104,0.2319557,0.501609,0.11150156,0.12419745,0.00010319227],"about_ca_topic_score_codex":0.0010299325,"about_ca_topic_score_gemma":0.00078477553,"teacher_disagreement_score":0.009357124,"about_ca_system_score_codex":0.00076762226,"about_ca_system_score_gemma":0.00024145852,"threshold_uncertainty_score":0.03130269},"labels":[],"label_agreement":null},{"id":"W2611205571","doi":"10.2142/biophys.52.s22_6","title":"1C1400 New colorimetric sandwich assay for detection of pathogens by using antimicrobial peptides as detection probes(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)","year":2012,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Conestoga Meat Packers (Canada)","funders":"","keywords":"Presentation (obstetrics); Antimicrobial; Antimicrobial peptides; Microbiology; Computational biology; Medicine; Biology; Surgery","score_opus":0.015028995368621362,"score_gpt":0.2244616365126889,"score_spread":0.20943264114406754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611205571","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14439906,0.029957613,0.7627758,0.002043053,0.0049879258,0.0025228146,0.00719058,0.017286872,0.028836412],"genre_scores_gemma":[0.18755677,0.013996193,0.7089043,0.0032964027,0.0007748017,0.005504018,0.020580813,0.00062111235,0.058765545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9940917,0.0014892507,0.0004188879,0.0017002961,0.0018630589,0.00043677544],"domain_scores_gemma":[0.99836487,0.00044129635,0.00021538307,0.0001829139,0.00058119005,0.0002143356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033970773,0.0047292397,0.0021148992,0.003930507,0.0009646082,0.001507816,0.004278304,0.003036661,0.0099590495],"category_scores_gemma":[0.002030157,0.0017273608,0.0016020675,0.0015839315,0.00082511955,0.0017215582,0.0022772157,0.005117542,0.0067098797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025842444,0.00028492694,0.0005363012,0.0005738128,0.0000790494,0.000080854115,0.00007075551,0.00019648328,0.9715533,0.0009211248,0.0058726887,0.019572208],"study_design_scores_gemma":[0.00008703035,0.0008868701,0.002818485,0.00015211415,0.00011003923,0.0008931524,0.000063837535,0.009370127,0.95442605,0.00051786547,0.030534573,0.00013987842],"about_ca_topic_score_codex":0.0005265601,"about_ca_topic_score_gemma":0.0013656587,"teacher_disagreement_score":0.0099590495,"about_ca_system_score_codex":0.0011905981,"about_ca_system_score_gemma":0.0011508102,"threshold_uncertainty_score":0.033316314},"labels":[],"label_agreement":null},{"id":"W2611457693","doi":"10.2142/biophys.42.s58_2","title":"1J1600 Inclastic Neutron Scattering from Collective Mutions of Proteins : Theoretical Analysis of the Dynamic Structure Factors in (Q,w)-space","year":2002,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Advanced NMR Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cancer Care South East","funders":"","keywords":"Space (punctuation); Physics; Neutron scattering; Neutron; Nuclear physics; Computer science","score_opus":0.007145414184247112,"score_gpt":0.2416345375566421,"score_spread":0.234489123372395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611457693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75710636,0.0019713885,0.19833526,0.0017376441,0.00039133508,0.000060163664,0.0001983606,0.00046025577,0.03973927],"genre_scores_gemma":[0.98176277,0.0007130711,0.011818292,0.0001850311,0.00007355095,0.00004329722,0.00028750073,0.00022379796,0.00489278],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99985695,0.00003648195,0.0000044779663,0.000031707015,0.00004423402,0.000026135383],"domain_scores_gemma":[0.9998264,0.000042823798,0.000024229645,0.000032262025,0.000033120967,0.000041292893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000683547,0.00064228993,0.00051313144,0.0010438646,0.0011115432,0.0007967284,0.00092593307,0.0009931258,0.0023073163],"category_scores_gemma":[0.001015913,0.00036897496,0.00042764936,0.0006426647,0.001378102,0.0010711434,0.00063549465,0.00074010703,0.00024142815],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030030636,0.000120119956,0.0028604716,0.00035988746,0.000057618912,0.000744154,0.00059841573,0.07872054,0.09923876,0.79691064,0.0039055694,0.016183587],"study_design_scores_gemma":[0.00004337018,0.00007375103,0.004218966,0.000038668968,0.000029696406,0.00027734303,0.00014594266,0.83369404,0.012139358,0.14602727,0.003238445,0.00007309848],"about_ca_topic_score_codex":0.0018608856,"about_ca_topic_score_gemma":0.001900115,"teacher_disagreement_score":0.0023073163,"about_ca_system_score_codex":0.0007233573,"about_ca_system_score_gemma":0.0004898898,"threshold_uncertainty_score":0.0077188015},"labels":[],"label_agreement":null},{"id":"W2611563625","doi":"10.2142/biophys.45.s189_4","title":"2P280 Strongly hydrogen-bonded water molecule present in the rhodopsins with proton-pump activity","year":2005,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Molecule; Proton; Hydrogen bond; Chemistry; Hydrogen; Biophysics; Chemical physics; Physics; Biology; Organic chemistry; Nuclear physics","score_opus":0.03883029236990687,"score_gpt":0.3045468949663243,"score_spread":0.26571660259641744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611563625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967044,0.00040224812,0.001738326,0.00006883207,0.00001133799,0.000003706169,0.000046540626,0.00001759415,0.0010070702],"genre_scores_gemma":[0.9983005,0.0001781709,0.0006684864,0.000025662395,0.000006575769,0.000004876008,0.00010574483,0.000006699379,0.00070329115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999474,0.000006555497,0.0000029386551,0.000016650838,0.000011626829,0.000014655811],"domain_scores_gemma":[0.9999429,0.000006022001,0.00001391336,0.000004307955,0.0000072182597,0.000025507401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007629824,0.00021381598,0.0001475838,0.00017455332,0.00025989066,0.00014202282,0.0002791175,0.00023818809,0.0012856305],"category_scores_gemma":[0.00014316045,0.00013313355,0.00012754896,0.00014502852,0.00028175965,0.00041465595,0.0003013504,0.0002458458,0.00014515649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008991805,0.0000087759445,0.0013972737,0.00003015217,0.000008514776,0.0002512771,0.000031233412,0.00004158246,0.9963612,0.0003217007,0.000052764448,0.0014056297],"study_design_scores_gemma":[0.000026936897,0.00019730972,0.027326778,0.000008138463,0.000049072652,0.001275304,0.00024385976,0.0018158538,0.96600825,0.000812819,0.0022187734,0.000016903137],"about_ca_topic_score_codex":0.0005953196,"about_ca_topic_score_gemma":0.00048262905,"teacher_disagreement_score":0.0012856305,"about_ca_system_score_codex":0.000103849954,"about_ca_system_score_gemma":0.0001736317,"threshold_uncertainty_score":0.0043008924},"labels":[],"label_agreement":null},{"id":"W2611589806","doi":"10.2142/biophys.52.s10_4","title":"2SB-04 Cracking the mystery of nine-ness : mechanisms of centriole formation(2SB Symposium organized by younger generation: Young scientists pioneering future life sciences,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)","year":2012,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"ATP Synthase and ATPases Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"","keywords":"Cognitive science; Biology; Gerontology; Psychology; Medicine","score_opus":0.010061297694924427,"score_gpt":0.24323956091935117,"score_spread":0.23317826322442675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611589806","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2783861,0.37290025,0.13736314,0.08966828,0.024982976,0.00022011058,0.0021561997,0.0023907525,0.0919322],"genre_scores_gemma":[0.6542277,0.09917123,0.034782864,0.006999112,0.005344632,0.00018573155,0.0028612383,0.0007675629,0.19565997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998294,0.000023501949,0.0000074149193,0.00006870455,0.000033531534,0.00003745857],"domain_scores_gemma":[0.9997191,0.000029157001,0.000023222525,0.000019735708,0.00005407561,0.00015469617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011741386,0.0005768564,0.00051610894,0.0007157807,0.0014431882,0.0030059447,0.0006177951,0.0013197542,0.007834296],"category_scores_gemma":[0.00036264362,0.00042574576,0.0003616109,0.00037235045,0.0018132896,0.002321493,0.0014420418,0.00172006,0.0026224123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007792257,0.00009613494,0.005984496,0.0012068389,0.00010397789,0.0010199007,0.0007758274,0.0020045906,0.43716696,0.18034007,0.18318051,0.18734151],"study_design_scores_gemma":[0.000077892495,0.00025108995,0.011606878,0.0003311907,0.00006748746,0.001583015,0.0010584053,0.008260895,0.14071432,0.07464956,0.761274,0.00012534356],"about_ca_topic_score_codex":0.0011674466,"about_ca_topic_score_gemma":0.002098773,"teacher_disagreement_score":0.007834296,"about_ca_system_score_codex":0.0015776873,"about_ca_system_score_gemma":0.0009521713,"threshold_uncertainty_score":0.026208282},"labels":[],"label_agreement":null},{"id":"W2611788288","doi":"10.2142/biophys.53.s157_1","title":"1P308 Real time image analysis technology for identification and collection of clustered cells using on-chip multi-imaging cell sorter(28. Bioengineering,Poster)","year":2013,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kootenay Association for Science & Technology","funders":"","keywords":"Identification (biology); Chip; Computer science; Image (mathematics); Computer vision; Biology; Telecommunications","score_opus":0.012255242454877127,"score_gpt":0.25721620226361025,"score_spread":0.24496095980873311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611788288","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.047370076,0.0033872484,0.9148525,0.0015173681,0.00071589905,0.00042660395,0.0028322174,0.013534071,0.015363978],"genre_scores_gemma":[0.10739384,0.0033463703,0.83733785,0.00078511273,0.00021056992,0.0012460077,0.0044790125,0.0010203994,0.044180833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929976,0.000069209156,0.00003909139,0.00019380038,0.00034007287,0.000058094058],"domain_scores_gemma":[0.99966705,0.000073169074,0.000038017723,0.00005822092,0.0001278619,0.00003570144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009462865,0.0009894492,0.0006761811,0.0014822785,0.0005444094,0.00084533927,0.0014009438,0.0008992758,0.021355623],"category_scores_gemma":[0.0005188942,0.0006025904,0.00058396516,0.0007668593,0.0004477572,0.0010545729,0.0005638236,0.0015884179,0.00828624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084996915,0.000055025183,0.0001860305,0.00017324014,0.000013497793,0.000083122875,0.00004390301,0.00019299611,0.9471194,0.0015439386,0.006499332,0.044004466],"study_design_scores_gemma":[0.000045255554,0.00023606753,0.0030269192,0.0000265479,0.00005008225,0.0012002604,0.000020323227,0.015579277,0.9185676,0.00074754603,0.06044388,0.0000563439],"about_ca_topic_score_codex":0.0007133407,"about_ca_topic_score_gemma":0.0012134191,"teacher_disagreement_score":0.021355623,"about_ca_system_score_codex":0.000663989,"about_ca_system_score_gemma":0.0006874658,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W2611801708","doi":"10.2142/biophys.50.s12_5","title":"2SD1025 Quantifying the Escherichia coli proteome and transcriptome in a single cell with single-molecule sensitivity(2SD Bridging Single Molecule Biophysics and System Biology:New Experimental and Theoretical Challenges,The 48th Annual Meeting of the Biophysical Society of Japan)","year":2010,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Bridging (networking); Proteome; Escherichia coli; Molecule; Transcriptome; Systems biology; Biophysics; Chemistry; Biology; Computational biology; Cell biology; Biochemistry; Gene; Computer science; Gene expression","score_opus":0.023213471494794986,"score_gpt":0.26483446456781823,"score_spread":0.24162099307302323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611801708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7161007,0.0014503264,0.27441964,0.00065894134,0.0003855787,0.00010077433,0.00187889,0.0017681082,0.0032370696],"genre_scores_gemma":[0.68309796,0.00075331796,0.30617902,0.00059554295,0.00010025645,0.00028280626,0.0024608108,0.0002046326,0.006325653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994972,0.00007804569,0.000045435554,0.00020909167,0.00012841888,0.00004178102],"domain_scores_gemma":[0.99979764,0.000051492163,0.000028132112,0.00004971481,0.000039222254,0.00003388313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068941934,0.0005462419,0.00058715895,0.00042284495,0.00031017463,0.00064608443,0.0004958492,0.0007233956,0.0014443259],"category_scores_gemma":[0.00036199586,0.00044681085,0.00025725135,0.00029258095,0.00035068573,0.0006070417,0.00055170956,0.00067144545,0.00042634827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020531323,0.000013223127,0.0004317842,0.000019989151,0.0000052690843,0.000013218449,0.0000127140465,0.000072421695,0.9966185,0.00019393051,0.00010636298,0.0024919973],"study_design_scores_gemma":[0.0000076364095,0.000053283617,0.004284972,0.000003787514,0.000010919192,0.00008277652,0.000018405583,0.006546938,0.98724025,0.00023103712,0.0015083015,0.000011695251],"about_ca_topic_score_codex":0.0005888768,"about_ca_topic_score_gemma":0.0017299397,"teacher_disagreement_score":0.0014443259,"about_ca_system_score_codex":0.00040799158,"about_ca_system_score_gemma":0.00028476492,"threshold_uncertainty_score":0.004831791},"labels":[],"label_agreement":null},{"id":"W4230449127","doi":"10.2142/biophys.45.s104_2","title":"1P290 Prediction of interfaces for oligomerizations of G-protein coupled receptors","year":2005,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Northern Alberta Institute of Technology","funders":"","keywords":"Receptor; Chemistry; Biophysics; Biology; Biochemistry","score_opus":0.011565375433193902,"score_gpt":0.23622887097612855,"score_spread":0.22466349554293463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230449127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9127011,0.00034617828,0.08207328,0.00010601094,0.00005076778,0.00012930976,0.0008548982,0.0010751594,0.0026634266],"genre_scores_gemma":[0.9451881,0.00021355604,0.050076306,0.000045483237,0.0000143529405,0.00008852298,0.0032383527,0.0001982226,0.00093709613],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.999877,0.000020388296,0.000010823134,0.000034631288,0.000030128384,0.000026940645],"domain_scores_gemma":[0.9998109,0.000041597697,0.000028760487,0.000017131157,0.00005082406,0.000050903953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016779348,0.0008368718,0.0006077138,0.0010836027,0.0006334408,0.00075795496,0.00041595113,0.0006472576,0.0014825828],"category_scores_gemma":[0.0005458913,0.0002687443,0.0008555969,0.0005755397,0.00016266799,0.0005839407,0.00032931092,0.00064042833,0.00082224223],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001343718,0.0003104653,0.008205262,0.00025746308,0.000055878605,0.0015750248,0.00016582689,0.014584274,0.9423912,0.007243571,0.0020331948,0.0218341],"study_design_scores_gemma":[0.0001510194,0.00038680105,0.013679804,0.000032151067,0.00015123184,0.0005915556,0.00033861538,0.6126331,0.3601527,0.00620385,0.0056240642,0.00005510272],"about_ca_topic_score_codex":0.00093956786,"about_ca_topic_score_gemma":0.0009940545,"teacher_disagreement_score":0.0014825828,"about_ca_system_score_codex":0.00038632756,"about_ca_system_score_gemma":0.0004683022,"threshold_uncertainty_score":0.0049597025},"labels":[],"label_agreement":null},{"id":"W4254753135","doi":"10.2142/biophys.54.122","title":"Letters from Abroad","year":2014,"lang":"fr","type":"article","venue":"Seibutsu Butsuri","topic":"Legal case studies and regulations","field":"Social Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Chemistry","score_opus":0.011569309725765217,"score_gpt":0.27716470767370455,"score_spread":0.26559539794793935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254753135","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005214423,0.005688979,0.00037706085,0.55529594,0.10209936,0.00021756858,0.00084685866,0.00031418787,0.32994562],"genre_scores_gemma":[0.010292592,0.0014046668,0.00019201121,0.114007175,0.008189678,0.00008471282,0.000167564,0.00007031779,0.8655913],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99899405,0.00018236222,0.00007581672,0.0001405629,0.0003207912,0.00028633323],"domain_scores_gemma":[0.9964495,0.001429989,0.00014694691,0.00018408505,0.001146045,0.00064349495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010968032,0.0007373804,0.0007063985,0.00090622675,0.004626094,0.0036146254,0.000987727,0.009809433,0.21722776],"category_scores_gemma":[0.011595307,0.00037157827,0.0007042546,0.0005079965,0.0009571256,0.0017651796,0.0019139149,0.008799356,0.07770283],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043755434,0.00002457214,0.00020246823,0.000054928943,0.0000048431953,0.0006997612,0.0001752753,0.000025312958,0.00018662761,0.0027637703,0.9882895,0.007529067],"study_design_scores_gemma":[0.000013294046,0.000019186542,0.00083550403,0.00007861697,0.0000046729065,0.000271782,0.00073268166,0.000060281,0.00015981993,0.0013361921,0.99647766,0.000010364903],"about_ca_topic_score_codex":0.0053857425,"about_ca_topic_score_gemma":0.010010494,"teacher_disagreement_score":0.21722776,"about_ca_system_score_codex":0.0017354039,"about_ca_system_score_gemma":0.002730359,"threshold_uncertainty_score":0.72669923},"labels":[],"label_agreement":null},{"id":"W429187425","doi":"10.2142/biophys.46.s170_1","title":"1P093 A Theoretical Analysis on the Free Energy Changes Associated with Protein Folding(3. Protein folding and misfolding (I),Poster Session,Abstract,Meeting Program of EABS &amp; BSJ 2006)","year":2006,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Institute for Nanotechnology","funders":"","keywords":"Session (web analytics); Folding (DSP implementation); Protein folding; Computational biology; Computer science; Chemistry; Engineering; Biology; Biochemistry; World Wide Web; Mechanical engineering","score_opus":0.005913200842647594,"score_gpt":0.22060856213335372,"score_spread":0.21469536129070613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W429187425","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11998185,0.004706131,0.46769065,0.015368785,0.0015975267,0.000106759864,0.00080784445,0.0003972008,0.38934317],"genre_scores_gemma":[0.8161059,0.0036531868,0.04565494,0.001222983,0.0014316472,0.00027054528,0.00047273404,0.00042438396,0.13076374],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9998369,0.00004365198,0.0000032932446,0.000021396438,0.00007015997,0.000024452122],"domain_scores_gemma":[0.9996761,0.00017248455,0.000019404382,0.000028247108,0.000081764716,0.00002204463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005933877,0.00044751677,0.00039257226,0.0012404935,0.001079681,0.0011909662,0.00074782554,0.0010015005,0.025480714],"category_scores_gemma":[0.0017307616,0.00023659805,0.00057789916,0.00061175355,0.0013683093,0.0014047247,0.0007162778,0.00069670816,0.0023438958],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017961815,0.0000239642,0.00016410156,0.000056841825,0.000010272273,0.00008930261,0.000027010154,0.05332891,0.00067656726,0.9323576,0.0066396357,0.0066077737],"study_design_scores_gemma":[0.000014241122,0.000015961048,0.00026737782,0.000024967241,0.0000049883697,0.000067647394,0.0000277524,0.41420922,0.00044737768,0.5769235,0.007989145,0.000007777532],"about_ca_topic_score_codex":0.002351307,"about_ca_topic_score_gemma":0.0015171133,"teacher_disagreement_score":0.025480714,"about_ca_system_score_codex":0.0013828619,"about_ca_system_score_gemma":0.0006207269,"threshold_uncertainty_score":0.0852415},"labels":[],"label_agreement":null},{"id":"W7106528230","doi":"10.2142/biophys.65.289","title":"Dear Young Researchers (Society), From Canada","year":2025,"lang":"en","type":"article","venue":"Seibutsu Butsuri","topic":"Youth Education and Societal Dynamics","field":"Social Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"","score_opus":0.029275447629462433,"score_gpt":0.34030883312600585,"score_spread":0.3110333854965434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7106528230","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051395213,0.03814598,0.00044756147,0.76266605,0.13755222,0.00019650764,0.0020471842,0.00019165411,0.053613335],"genre_scores_gemma":[0.019042388,0.022468066,0.0008994044,0.13717611,0.0069846744,0.00014284428,0.0006757958,0.000097215896,0.8125134],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99697626,0.0001803855,0.000130226,0.00033140436,0.001335319,0.0010464517],"domain_scores_gemma":[0.9704772,0.00055311114,0.00067354634,0.00027979273,0.0146280825,0.013388248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029163046,0.00068605476,0.0008401705,0.0018084337,0.011657844,0.007105752,0.0013461815,0.004819106,0.05799435],"category_scores_gemma":[0.010987176,0.00052910036,0.00055018795,0.0017185761,0.002035651,0.0019144845,0.0034463152,0.0080675455,0.02096871],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024268535,0.000025833671,0.0027647482,0.00011344778,0.000006799094,0.00016626311,0.0005710846,0.000015280013,0.00014500854,0.0010439261,0.96996707,0.025156274],"study_design_scores_gemma":[0.000013925243,0.000016337837,0.0059037977,0.0002478184,0.000013859027,0.00013766141,0.0046505835,0.000025468926,0.00013185645,0.0003550925,0.9884791,0.000024394923],"about_ca_topic_score_codex":0.764277,"about_ca_topic_score_gemma":0.9097685,"teacher_disagreement_score":0.764277,"about_ca_system_score_codex":0.019937204,"about_ca_system_score_gemma":0.12800594,"threshold_uncertainty_score":0.47422242},"labels":[],"label_agreement":null}]}