{"meta":{"query_hash":"500b7e493db6","filters":{"venue":"The Protein Journal"},"cohort_total":32,"direct_labels_cover":0,"predictions_cover":32,"exported":32,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/500b7e493db6","api":"https://metacan.xera.ac/api/v1/cohort?venue=The+Protein+Journal"},"results":[{"id":"W1965545714","doi":"10.1007/s10930-008-9128-1","title":"Size Distribution and Molecular Associations of Plasma Fibronectin and Fibronectin Crosslinked by Transglutaminase 2","year":2008,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Blood properties and coagulation","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Réseau de Recherche en Santé Buccodentaire et Osseuse; McGill University; Advanced Foods and Materials Canada","keywords":"Tissue transglutaminase; Fibronectin; Biophysics; Chaotropic agent; Extracellular matrix; Fibrillogenesis; Cell adhesion; Fibril; Covalent bond; Adhesion; Aqueous solution; Collagen VI; Materials science; Chemistry; Polymer chemistry; Biochemistry; Enzyme; Organic chemistry; Composite material; Biology","score_opus":0.01540299961970509,"score_gpt":0.23367096983657792,"score_spread":0.21826797021687283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965545714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961356,0.0007583321,0.0013181474,0.000066237924,0.000016018425,0.0000061937603,0.000107100925,0.000016936068,0.0015754307],"genre_scores_gemma":[0.9963007,0.00032958362,0.0006505207,0.000054543532,0.000038719856,0.000013777856,0.00032729053,0.00001914698,0.0022657549],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984837,0.000034895715,0.000009489489,0.000037864134,0.00003233901,0.00003703851],"domain_scores_gemma":[0.99939096,0.00023515637,0.00010447399,0.000032877368,0.00010113892,0.00013532114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024010384,0.0002395941,0.00014538088,0.00061326026,0.00016391595,0.00033162592,0.0002614846,0.00034457206,0.001969355],"category_scores_gemma":[0.0006473353,0.00025571248,0.00017302088,0.00018335313,0.0002418613,0.00040711003,0.00020867646,0.000409726,0.0005525063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007790678,0.000024893676,0.0014807355,0.000013638111,0.000015234886,0.00007276521,0.000064473716,0.00006216761,0.99600464,0.00018158693,0.000059889062,0.0012408723],"study_design_scores_gemma":[0.00008444199,0.000887419,0.20338732,0.0000114597615,0.00007968014,0.0013405674,0.00026643553,0.0062732217,0.7835511,0.0006015436,0.0034749014,0.000041837593],"about_ca_topic_score_codex":0.0010415899,"about_ca_topic_score_gemma":0.000521778,"teacher_disagreement_score":0.001969355,"about_ca_system_score_codex":0.00025592052,"about_ca_system_score_gemma":0.00011843498,"threshold_uncertainty_score":0.006588161},"labels":[],"label_agreement":null},{"id":"W1968167623","doi":"10.1023/b:jopc.0000016255.17077.2c","title":"Regulation of NADH/CoQ Oxidoreductase: Do Phosphorylation Events Affect Activity?","year":2004,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Phosphorylation; Biochemistry; NADH dehydrogenase; Superoxide; Mitochondrion; Oxidoreductase; Cytochrome c; Protein kinase A; Protein phosphorylation; Biology; Chemistry; Protein subunit; Enzyme","score_opus":0.010219921481968106,"score_gpt":0.2482588282974132,"score_spread":0.2380389068154451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968167623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9728469,0.008848778,0.008152755,0.003174227,0.00042173787,0.000034766606,0.00054313766,0.000169036,0.0058085904],"genre_scores_gemma":[0.99554116,0.0016602306,0.0005696502,0.00019239965,0.00004701589,0.000008557347,0.00019821442,0.000027373539,0.0017554286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998172,0.000029298766,0.000013848366,0.000051345076,0.000029744491,0.000058626123],"domain_scores_gemma":[0.99966156,0.00008983984,0.00007309648,0.000055120374,0.000054691995,0.00006578837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042810477,0.00037139977,0.00047458595,0.0001816019,0.00027976517,0.0010295851,0.00061685016,0.0006834353,0.003485396],"category_scores_gemma":[0.00055929285,0.00030363182,0.00034529797,0.0002275596,0.0005464574,0.0021727,0.00032572792,0.00069361506,0.0011446461],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012646208,0.00015369216,0.003577245,0.00013219658,0.000044188768,0.00032346667,0.000118261596,0.0002907941,0.9803167,0.0020885256,0.00069915026,0.010991239],"study_design_scores_gemma":[0.00011694158,0.00043174572,0.13929458,0.00003823334,0.00010037709,0.0013403896,0.0004161535,0.0058016456,0.842989,0.003459324,0.0059640827,0.000047506615],"about_ca_topic_score_codex":0.0005982895,"about_ca_topic_score_gemma":0.0007380012,"teacher_disagreement_score":0.003485396,"about_ca_system_score_codex":0.0004612801,"about_ca_system_score_gemma":0.0001601561,"threshold_uncertainty_score":0.011659741},"labels":[],"label_agreement":null},{"id":"W1980865941","doi":"10.1007/s10930-009-9199-7","title":"Quantitative Proteomic Analysis of CMS-Related Changes in Honglian CMS Rice Anther","year":2009,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China; University at Albany; Canadian Institute for Theoretical Astrophysics","keywords":"Biology; Stamen; Gene; Genetics; Nuclear gene; Genome; Cytoplasmic male sterility; Molecular biology; Botany","score_opus":0.009393122718319586,"score_gpt":0.2605151824404878,"score_spread":0.2511220597221682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980865941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938803,0.0006595389,0.0021277731,0.00006794662,0.00003181309,0.000025035455,0.0020094495,0.000053423082,0.0011447079],"genre_scores_gemma":[0.98314315,0.000592386,0.0044685546,0.00015449112,0.000031884087,0.00009030262,0.004582816,0.000054559758,0.0068819043],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999378,0.000004089212,0.000005686179,0.000022625532,0.000014577011,0.000015215277],"domain_scores_gemma":[0.99987733,0.000024582669,0.00002785459,0.000009501771,0.000024414778,0.000036260975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001391626,0.00032109136,0.00034598552,0.000352764,0.0002446129,0.0002967819,0.0001905708,0.00017619744,0.0009784587],"category_scores_gemma":[0.0001185335,0.00019561742,0.0003454776,0.00036563288,0.0001801226,0.00026608334,0.00020750388,0.00052063685,0.00030884115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010638168,0.000008291008,0.00032875384,0.000022607626,0.000006414217,0.000024672323,0.000012831278,0.000011990719,0.9991092,0.000029828609,0.000021765587,0.00031718233],"study_design_scores_gemma":[0.000025991938,0.000270867,0.21184324,0.0000065636546,0.0000920665,0.0004099322,0.00017454564,0.0012039435,0.7838168,0.00010106264,0.0020353314,0.000019771795],"about_ca_topic_score_codex":0.0017928248,"about_ca_topic_score_gemma":0.0025941222,"teacher_disagreement_score":0.0017928248,"about_ca_system_score_codex":0.00039650203,"about_ca_system_score_gemma":0.00024378471,"threshold_uncertainty_score":0.0035648346},"labels":[],"label_agreement":null},{"id":"W1981305922","doi":"10.1007/s10930-006-9050-3","title":"Single Molecule Assays of β-Galactosidase from Two Wild-type Strains of E. coli: Effects of Protease Inhibitors on Microheterogeneity and Different Relative Activities with Differing Substrates","year":2007,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Enzyme Catalysis and Immobilization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg; University of Manitoba","funders":"","keywords":"Protease; Enzyme; Biochemistry; Capillary electrophoresis; Chemistry; Bioorganic chemistry; Bacteria; Enzyme assay; Biology; Molecular biology; Genetics","score_opus":0.00809780254364606,"score_gpt":0.2240606577896447,"score_spread":0.21596285524599865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981305922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9692983,0.0012259914,0.027440859,0.00020852867,0.000111441324,0.00009185772,0.0006331145,0.0002581703,0.0007317976],"genre_scores_gemma":[0.9540483,0.0013133202,0.038830876,0.00011869766,0.000032720054,0.00021027516,0.0028679983,0.0001751496,0.0024027075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919456,0.00014354996,0.00013525184,0.00016998748,0.00024516843,0.00011157336],"domain_scores_gemma":[0.99912995,0.00033631714,0.00011969164,0.00014286971,0.00011892408,0.00015233457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000856848,0.0010338348,0.00091083196,0.00046734916,0.00021605055,0.0008267526,0.0009741473,0.0008422301,0.0008489706],"category_scores_gemma":[0.00088805787,0.00045825023,0.0006820003,0.0005309977,0.00042510018,0.0004584772,0.00034394485,0.0021084996,0.000529969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052901174,0.000019491437,0.000051151183,0.000022457261,0.0000071630016,0.0000096014855,0.0000082135175,0.000020272584,0.9995443,0.000025491376,0.0000073084598,0.00023150927],"study_design_scores_gemma":[0.0000052102223,0.000048076217,0.0005277318,0.0000018287699,0.000010918612,0.000054513665,0.000007944822,0.00027225813,0.9989291,0.000013335242,0.00012595543,0.0000031330621],"about_ca_topic_score_codex":0.0004462424,"about_ca_topic_score_gemma":0.0005933769,"teacher_disagreement_score":0.0010338348,"about_ca_system_score_codex":0.0004799265,"about_ca_system_score_gemma":0.00021903277,"threshold_uncertainty_score":0.0045315027},"labels":[],"label_agreement":null},{"id":"W1994046381","doi":"10.1007/s10930-010-9303-z","title":"Identification of Three Superoxide dismutase Genes from a Geobacillus sp.","year":2011,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Superoxide dismutase; Escherichia coli; Homotetramer; Biochemistry; Gene; Amino acid; Peptide sequence; Molecular biology; Dismutase; Pichia pastoris; Biology; Open reading frame; Chemistry; Enzyme; Recombinant DNA","score_opus":0.014640834606590264,"score_gpt":0.20025862379770812,"score_spread":0.18561778919111785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994046381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914967,0.0006252941,0.004856147,0.0005410058,0.0001030486,0.00005471429,0.0014378186,0.00008641094,0.00079888944],"genre_scores_gemma":[0.9818978,0.00054738513,0.008975866,0.00019945008,0.000017943592,0.000056664812,0.0057540885,0.000031567033,0.0025193444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999838,0.00001460557,0.000021078988,0.00003529834,0.00005682828,0.000034168435],"domain_scores_gemma":[0.999726,0.000059975686,0.000049301398,0.000032914744,0.000060443712,0.0000712852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017942137,0.00064020226,0.0003933916,0.00054048275,0.00021986091,0.0006493466,0.0002833431,0.00055831764,0.00036995288],"category_scores_gemma":[0.00037988578,0.00018976464,0.00044826986,0.00040974477,0.0003166503,0.00029566663,0.00043293246,0.00075776974,0.0003190037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001295548,0.000051667583,0.0010780805,0.0000485786,0.0000057581906,0.00013696025,0.000056153774,0.000032000185,0.9955647,0.000109384964,0.000057694404,0.0027293873],"study_design_scores_gemma":[0.00007038675,0.00047049316,0.037015866,0.00003945674,0.00013044046,0.0026332743,0.00052534434,0.0010644956,0.95132166,0.0005448682,0.00614246,0.000041268875],"about_ca_topic_score_codex":0.0012188386,"about_ca_topic_score_gemma":0.0010779332,"teacher_disagreement_score":0.0012188386,"about_ca_system_score_codex":0.0003475666,"about_ca_system_score_gemma":0.00061474985,"threshold_uncertainty_score":0.002521813},"labels":[],"label_agreement":null},{"id":"W1995615397","doi":"10.1007/s10930-010-9266-0","title":"Effect of Size, Quaternary Structure and Translational Error on the Static and Dynamic Heterogeneity of β-Galactosidase and Measurement of Electrophoretic Dynamic Heterogeneity","year":2010,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Winnipeg","funders":"","keywords":"Bacillus circulans; Lactobacillus reuteri; Beta-galactosidase; Electrophoresis; Lactobacillus helveticus; Capillary electrophoresis; Lactobacillus; Chemistry; Enzyme; Biochemistry; Biology; Chromatography; Escherichia coli","score_opus":0.0048968726411119335,"score_gpt":0.24443346928619908,"score_spread":0.23953659664508714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995615397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9859276,0.00065897487,0.012161379,0.00013812481,0.00007868194,0.000038931703,0.0002027811,0.00010555781,0.0006881652],"genre_scores_gemma":[0.99046046,0.0004390095,0.007023603,0.0000918076,0.000024846024,0.00005748576,0.00035905483,0.00019294446,0.0013507186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985582,0.0004728986,0.00016836764,0.0002499076,0.00041608847,0.00013464032],"domain_scores_gemma":[0.99247205,0.005163338,0.00068344455,0.0008668398,0.00041041904,0.000403855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020324895,0.00072132144,0.00047674056,0.00035526586,0.00031074646,0.0007837292,0.0005423749,0.00053187023,0.0012368902],"category_scores_gemma":[0.0055907816,0.00062700815,0.00037014252,0.00043068168,0.00095362123,0.0007455748,0.00049653574,0.0013906287,0.00022671586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048706922,0.000051412,0.0006400918,0.000026363114,0.00001854468,0.00003465362,0.000052328855,0.00039844867,0.9969131,0.000107761145,0.000024918543,0.0012454141],"study_design_scores_gemma":[0.0000095396845,0.00010823253,0.0018593281,0.000001963574,0.000015796302,0.000045417244,0.0000093428225,0.0019407255,0.995823,0.000037092486,0.00014043473,0.000009247784],"about_ca_topic_score_codex":0.0009088382,"about_ca_topic_score_gemma":0.00085156923,"teacher_disagreement_score":0.0020324895,"about_ca_system_score_codex":0.00058275193,"about_ca_system_score_gemma":0.0003849348,"threshold_uncertainty_score":0.010748982},"labels":[],"label_agreement":null},{"id":"W2011768899","doi":"10.1007/s10930-013-9464-7","title":"Electrophoretic Heterogeneity Limits the Utility of Streptavidin-β-Galactosidase as a Probe in Free Zone Capillary Electrophoresis Separations","year":2013,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg","funders":"","keywords":"Capillary electrophoresis; Electrophoresis; Streptavidin; Conjugate; Chemistry; Electropherogram; Chromatography; DNA; Gel electrophoresis; Biochemistry; Biotin","score_opus":0.0078051392875119995,"score_gpt":0.21000700149543136,"score_spread":0.20220186220791936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011768899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9250894,0.0044562113,0.06656146,0.00069283706,0.00005569197,0.00005597791,0.0001567701,0.00037081903,0.002560768],"genre_scores_gemma":[0.98218864,0.0017107305,0.014328491,0.00032495832,0.00003453624,0.0000500004,0.0002304427,0.00010830833,0.0010239095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99750656,0.0006049089,0.000117695476,0.0004945039,0.0010252019,0.00025107],"domain_scores_gemma":[0.99648774,0.002586925,0.0001870197,0.00022613484,0.00029883752,0.00021336882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018953903,0.00044960075,0.0006895442,0.0007494593,0.00052565325,0.0022304486,0.0010116247,0.0012687239,0.00087464345],"category_scores_gemma":[0.0033775158,0.0006471179,0.0003199891,0.0004757822,0.0012640879,0.0012448137,0.00081772084,0.0010923612,0.0007360286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010294929,0.000021128124,0.0006186921,0.00006915802,0.000011524964,0.000057303463,0.000074170974,0.00022327338,0.9921645,0.00081292744,0.00009070353,0.0057537593],"study_design_scores_gemma":[0.000013383676,0.00018226508,0.002215557,0.000020800411,0.00004364411,0.00060776994,0.00012885712,0.003903909,0.9886579,0.0015977733,0.0026027956,0.000025366384],"about_ca_topic_score_codex":0.001301082,"about_ca_topic_score_gemma":0.0017297264,"teacher_disagreement_score":0.0022304486,"about_ca_system_score_codex":0.00072217506,"about_ca_system_score_gemma":0.00073131063,"threshold_uncertainty_score":0.010023892},"labels":[],"label_agreement":null},{"id":"W2011837359","doi":"10.1007/s10930-006-9062-z","title":"Identification and Biochemical Studies on Novel Non-Nucleoside Inhibitors of the Enzyme Adenosine Kinase","year":2007,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Adenosine and Purinergic Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Adenosine; Nucleoside; Enzyme; Adenosine kinase; Chemistry; Kinase; Biochemistry; Intracellular; Extracellular; Lead compound; Stereochemistry; In vitro; Adenosine deaminase","score_opus":0.015016194525875642,"score_gpt":0.26997335367668757,"score_spread":0.2549571591508119,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011837359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9063635,0.04052158,0.033999898,0.00082392065,0.0004203995,0.00044529667,0.00076948066,0.00026518744,0.016390769],"genre_scores_gemma":[0.95351094,0.017975358,0.018655896,0.00032499523,0.00014194971,0.00023337555,0.0017370809,0.00006358502,0.007356835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986637,0.000023384768,0.000013873686,0.000023084618,0.000041266157,0.00003211909],"domain_scores_gemma":[0.99983525,0.00005649849,0.000028334141,0.000015323056,0.000030764226,0.00003375816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029820172,0.00079478713,0.0005229765,0.00034596506,0.00033281744,0.00051777635,0.0005255087,0.00041223518,0.0014140098],"category_scores_gemma":[0.00030716183,0.00027032886,0.00041657692,0.00021939477,0.00026214958,0.0003952785,0.00020885242,0.001074206,0.0005859366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040759612,0.00022969137,0.00014214311,0.00009228607,0.000022954346,0.00020408981,0.000024266874,0.0005429101,0.9884418,0.0011467747,0.0001868712,0.008558607],"study_design_scores_gemma":[0.00009966416,0.0012597836,0.0008932531,0.000009604533,0.00006172451,0.00085380994,0.000017722103,0.0015664279,0.9847808,0.0002478344,0.010196898,0.0000123992595],"about_ca_topic_score_codex":0.0005047909,"about_ca_topic_score_gemma":0.001039117,"teacher_disagreement_score":0.0014140098,"about_ca_system_score_codex":0.00055119867,"about_ca_system_score_gemma":0.00039247912,"threshold_uncertainty_score":0.004730284},"labels":[],"label_agreement":null},{"id":"W2022633296","doi":"10.1007/s10930-009-9168-1","title":"Practical Considerations When Using Temperature to Obtain Rate Constants and Activation Thermodynamics of Enzymes with Two Catalytic Steps: Native and N460T-β-Galactosidase (E. coli) as Examples","year":2009,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Enzyme Catalysis and Immobilization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Thermodynamics; Chemistry; Catalysis; Reaction rate constant; Enzyme; Atmospheric temperature range; Kinetics; Physical chemistry; Physics; Biochemistry; Quantum mechanics","score_opus":0.020204423536433327,"score_gpt":0.2909066744455686,"score_spread":0.2707022509091353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022633296","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29397005,0.029972373,0.6570566,0.0062170783,0.0017694922,0.00050604704,0.0009291431,0.0016727137,0.0079065105],"genre_scores_gemma":[0.58393437,0.019609656,0.38779035,0.0009156688,0.00018097281,0.0009530374,0.00096976984,0.0006375026,0.0050086016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99737203,0.0008735149,0.0002131628,0.00041497,0.00093416264,0.00019216066],"domain_scores_gemma":[0.99404293,0.004011712,0.00028184277,0.00052108755,0.0010009719,0.00014153468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006831512,0.0018167236,0.0029162422,0.0012680836,0.0010188528,0.0017984419,0.0032899743,0.0022936477,0.0013389426],"category_scores_gemma":[0.014209001,0.0014628606,0.0015624423,0.0015006242,0.0013079522,0.0024789681,0.0010258162,0.0052871485,0.001098188],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004368796,0.00037401504,0.0032536297,0.0014563355,0.00017285498,0.00058942597,0.000598353,0.013100666,0.93274444,0.009793197,0.0017682426,0.035711955],"study_design_scores_gemma":[0.000046646383,0.00040123615,0.002914931,0.00009984681,0.00014080388,0.001178543,0.0003530728,0.02531397,0.94661003,0.013133475,0.00961786,0.00018958857],"about_ca_topic_score_codex":0.0029548542,"about_ca_topic_score_gemma":0.006496928,"teacher_disagreement_score":0.006831512,"about_ca_system_score_codex":0.0013111545,"about_ca_system_score_gemma":0.0011268052,"threshold_uncertainty_score":0.03612894},"labels":[],"label_agreement":null},{"id":"W2032416948","doi":"10.1007/s10930-008-9145-0","title":"Model and Molecular Dynamic Simulations of Active and Inactive Endo-β-1,4-Mannanase in Tomato Fruit","year":2008,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Bioorganic chemistry; Active site; Chemistry; Ripening; Enzyme; Amino acid; Molecular dynamics; Biochemistry; Root mean square; Stereochemistry; Food science; Computational chemistry; Physics","score_opus":0.011953828823096944,"score_gpt":0.21588167647091794,"score_spread":0.203927847647821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032416948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9752423,0.00019141643,0.0031079766,0.00082801393,0.00006775163,0.00005347689,0.0011856364,0.00017787897,0.01914547],"genre_scores_gemma":[0.9934089,0.00011830402,0.0018871146,0.00012641856,0.000016310152,0.00008576844,0.0010309006,0.00009348718,0.0032327983],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998795,0.000018246754,0.0000041020467,0.000026123987,0.000024897747,0.00004716667],"domain_scores_gemma":[0.9996172,0.00016502319,0.00002812859,0.000024001585,0.00005932704,0.000106223335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002218367,0.00066993287,0.00080507644,0.00061812927,0.0015093122,0.0011508245,0.0017755362,0.002467774,0.012872367],"category_scores_gemma":[0.0007651092,0.0005756154,0.0007658417,0.0006318047,0.0012955009,0.00095750095,0.00040917684,0.0011928777,0.0005928597],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016913681,0.00017593266,0.0017735776,0.0000435716,0.0000474343,0.00026998256,0.00008992774,0.9895403,0.0025755146,0.0035684833,0.0009975861,0.00074850325],"study_design_scores_gemma":[0.00010969992,0.00006876522,0.000941304,0.0000076233887,0.000012834207,0.000015953263,0.00007212143,0.9970497,0.00050826324,0.0008348408,0.0003631964,0.00001565716],"about_ca_topic_score_codex":0.043955214,"about_ca_topic_score_gemma":0.024396954,"teacher_disagreement_score":0.043955214,"about_ca_system_score_codex":0.0032047322,"about_ca_system_score_gemma":0.0019258261,"threshold_uncertainty_score":0.08739871},"labels":[],"label_agreement":null},{"id":"W2032932620","doi":"10.1007/s10930-010-9270-4","title":"A New Structure-based Classification of Gram-positive Bacteriocins","year":2010,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Bacteriocin; Computational biology; Antimicrobial peptides; Biology; Classification scheme; Artificial intelligence; Machine learning; Computer science; Antimicrobial; Peptide; Biochemistry; Microbiology","score_opus":0.011666416013332978,"score_gpt":0.20810295756894875,"score_spread":0.19643654155561577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032932620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87070274,0.008154321,0.09716781,0.0010993772,0.00067316793,0.0005444886,0.0038961684,0.0018493742,0.01591267],"genre_scores_gemma":[0.83165693,0.0022488723,0.15193266,0.00051419396,0.00022024768,0.00025007984,0.008838907,0.00020341511,0.0041347137],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99955946,0.000046334757,0.000059194033,0.000086759355,0.0001651048,0.00008308057],"domain_scores_gemma":[0.99895895,0.00015120611,0.00023273802,0.00008818143,0.00035294006,0.00021597603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047123342,0.0009179911,0.00083208736,0.0036006337,0.00071514177,0.0016490575,0.00073698984,0.00085008884,0.0017685243],"category_scores_gemma":[0.001089028,0.00017241729,0.00093024917,0.0015461508,0.0008467134,0.0011113384,0.00077567296,0.0013549196,0.0009799663],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016302131,0.00047926942,0.0162731,0.000605477,0.0001276853,0.00033586356,0.0002212103,0.0017277576,0.8457041,0.004212123,0.0023577546,0.12632549],"study_design_scores_gemma":[0.0011068196,0.009991923,0.21393542,0.0005504275,0.0014428553,0.009287406,0.0013641543,0.15151961,0.4862155,0.033818416,0.09036382,0.0004036957],"about_ca_topic_score_codex":0.00086707337,"about_ca_topic_score_gemma":0.0007613821,"teacher_disagreement_score":0.0036006337,"about_ca_system_score_codex":0.0005705305,"about_ca_system_score_gemma":0.0006820276,"threshold_uncertainty_score":0.0059162974},"labels":[],"label_agreement":null},{"id":"W2033135462","doi":"10.1007/s10930-009-9220-1","title":"Heterogeneous Properties of Individual Molecules of β-Galactosidase from the Thermophilic Bacteria Geobacillus stearothermophilus","year":2010,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Enzyme Catalysis and Immobilization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg","funders":"","keywords":"Geobacillus stearothermophilus; Thermophile; Thermus thermophilus; Bacteria; Mesophile; Thermus; Chemistry; Enzyme; Escherichia coli; Biochemistry; Biology","score_opus":0.012274634600783388,"score_gpt":0.20857770489410438,"score_spread":0.196303070293321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033135462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982674,0.00027505797,0.0009998969,0.000024168254,0.0000044538,0.0000030769354,0.0000715071,0.0000082720935,0.00034614673],"genre_scores_gemma":[0.9989548,0.00013329377,0.0002765672,0.000014304553,0.000004288707,0.0000042286274,0.00026233823,0.000011527886,0.00033862962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998728,0.00002278655,0.000006053096,0.000023440338,0.0000446242,0.000030318319],"domain_scores_gemma":[0.999814,0.00006193201,0.00003225929,0.000015171072,0.000026725353,0.000049920058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017328504,0.0002532027,0.00021242668,0.0002704436,0.00015969586,0.0004309326,0.0001732107,0.00018395306,0.0006296605],"category_scores_gemma":[0.00032677018,0.00013900478,0.00019796041,0.00027225143,0.00030391943,0.00032881272,0.0001825016,0.0005522762,0.00012100013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000829843,0.000010635177,0.0003845834,0.000012250203,0.000009805828,0.000013216367,0.0000191192,0.00010047787,0.99880207,0.0000586985,0.000009253175,0.00049693405],"study_design_scores_gemma":[0.0000128374495,0.00017204201,0.008853892,0.0000049621985,0.00003721869,0.00012402776,0.000057302263,0.0011916026,0.9890225,0.00008115986,0.00043424967,0.00000814599],"about_ca_topic_score_codex":0.0004692412,"about_ca_topic_score_gemma":0.00035952975,"teacher_disagreement_score":0.0006296605,"about_ca_system_score_codex":0.00017315852,"about_ca_system_score_gemma":0.000117130694,"threshold_uncertainty_score":0.0021064281},"labels":[],"label_agreement":null},{"id":"W2041218533","doi":"10.1023/b:jopc.0000020083.81718.55","title":"Phosphorylated Derivatives That Activate or Inhibit Mammalian Adenosine Kinase Provide Insights into the Role of Pentavalent Ions in AK Catalysis","year":2004,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Heart and Stroke Foundation of Canada","keywords":"Chemistry; Pyrophosphate; Phosphate; Adenosine kinase; Phosphonate; Adenosine; Stereochemistry; Catalysis; Vanadate; Medicinal chemistry; Enzyme; Biochemistry","score_opus":0.01187492123634363,"score_gpt":0.2538562890923973,"score_spread":0.2419813678560537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041218533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.982483,0.0021177968,0.006916508,0.00035101984,0.00014326621,0.000044125463,0.00030723168,0.00015230363,0.0074847857],"genre_scores_gemma":[0.9947636,0.0008436206,0.0027386444,0.00005502377,0.000013816079,0.000008674202,0.00023094713,0.00004029624,0.0013052435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991715,0.0000101128835,0.000009823097,0.00001701457,0.000024690034,0.000021285075],"domain_scores_gemma":[0.9999052,0.000030183302,0.000021439408,0.000016275715,0.0000070143783,0.00001979311],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015677713,0.00043726878,0.00031689883,0.00017059066,0.00019407562,0.00057372655,0.00048315566,0.0003735979,0.0019153885],"category_scores_gemma":[0.00021844296,0.000198371,0.00023493996,0.00020313333,0.000444377,0.0006578374,0.00023105968,0.0009880423,0.0003507645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077298743,0.00004393681,0.00019146202,0.00006777856,0.000014582753,0.00025179214,0.000034269357,0.00033306782,0.9913692,0.0034392136,0.00010438968,0.0033774392],"study_design_scores_gemma":[0.00003341376,0.00017435911,0.00031641865,0.0000043326954,0.000021050937,0.00032372496,0.000016757169,0.00062705885,0.99648213,0.0005845319,0.001409154,0.000007090751],"about_ca_topic_score_codex":0.00049374806,"about_ca_topic_score_gemma":0.00067848817,"teacher_disagreement_score":0.0019153885,"about_ca_system_score_codex":0.0004757915,"about_ca_system_score_gemma":0.0002576819,"threshold_uncertainty_score":0.0064076185},"labels":[],"label_agreement":null},{"id":"W2041293018","doi":"10.1007/s10930-004-5225-y","title":"A Novel Neutral Protease from Thermoactinomyces Species 27a: Sequencing of the Gene, Purification, and Characterization of the Enzyme","year":2004,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Russian Science Foundation; Russian Academy of Sciences; Russian Foundation for Basic Research","keywords":"Biochemistry; Peptide sequence; Molecular biology; Esterase; Chemistry; Molecular mass; Amino acid; Open reading frame; Biology; Enzyme; Gene","score_opus":0.023983455134690853,"score_gpt":0.22219103645078653,"score_spread":0.19820758131609567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041293018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9781146,0.0040162145,0.011616161,0.00067089073,0.00026216567,0.00013021323,0.0031924632,0.00026583747,0.00173154],"genre_scores_gemma":[0.94052213,0.0026380948,0.025335284,0.0003079092,0.00013142182,0.00009710068,0.022553463,0.00019894299,0.008215756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999749,0.000019314699,0.000025092906,0.00007170987,0.00006952805,0.000065344146],"domain_scores_gemma":[0.99943453,0.00007654413,0.00009908824,0.000049215818,0.00009878904,0.00024177377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016409921,0.0011456388,0.0010894907,0.00065721414,0.00028841032,0.0011369241,0.0005022831,0.0005875976,0.000801149],"category_scores_gemma":[0.00042367814,0.00028606533,0.0008656102,0.00048378174,0.0004317768,0.000435631,0.00039080816,0.00090674794,0.0009993821],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025119295,0.00005968046,0.00056329515,0.000057133966,0.000009829182,0.0006838755,0.000038236165,0.00010980801,0.9953022,0.000114735354,0.00016968547,0.002640367],"study_design_scores_gemma":[0.0000700752,0.0006788318,0.022620123,0.00003331225,0.00011098441,0.0051542255,0.00023117135,0.0021701022,0.95433986,0.0003794959,0.014153522,0.000058240497],"about_ca_topic_score_codex":0.0016819487,"about_ca_topic_score_gemma":0.0010570709,"teacher_disagreement_score":0.0016819487,"about_ca_system_score_codex":0.00058555335,"about_ca_system_score_gemma":0.00074598746,"threshold_uncertainty_score":0.0042485},"labels":[],"label_agreement":null},{"id":"W2041798014","doi":"10.1007/s10930-006-0011-7","title":"Prediction of Three Dimensional Structure of Calmodulin","year":2006,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Mitacs","keywords":"Calmodulin; Computer science; Flexibility (engineering); Set (abstract data type); Protein structure; Sequence (biology); Computational biology; Data mining; Mathematics; Biology; Statistics; Genetics","score_opus":0.0058938143623266485,"score_gpt":0.19878330479051173,"score_spread":0.1928894904281851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041798014","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92257905,0.00089134404,0.069115385,0.0004439387,0.000095303454,0.000101732716,0.0029159202,0.0016373092,0.0022201003],"genre_scores_gemma":[0.9343562,0.0005319504,0.056229442,0.00007204186,0.000020801073,0.00004428287,0.0074149603,0.000093981274,0.0012362445],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9999474,0.000009746726,0.000003995252,0.000013290368,0.00001817335,0.00000730099],"domain_scores_gemma":[0.9997782,0.000077436984,0.000031335177,0.000018602928,0.000047063142,0.00004728809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012119042,0.0004974273,0.0005192873,0.00042296082,0.00037310334,0.00060724485,0.00046178853,0.00053102174,0.001391317],"category_scores_gemma":[0.000584748,0.00030362056,0.0006515684,0.00028424058,0.00016704304,0.00020160993,0.00016449431,0.0007919098,0.0005473426],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018159994,0.00039912056,0.021685505,0.00050993194,0.00015231765,0.0022084971,0.00019692653,0.08406652,0.82418245,0.0057219085,0.0077898474,0.051271126],"study_design_scores_gemma":[0.00019977352,0.00025605748,0.022371558,0.00004092819,0.000110671055,0.0005794476,0.00013600496,0.78963727,0.17610516,0.003234341,0.0072744433,0.000054397653],"about_ca_topic_score_codex":0.004578608,"about_ca_topic_score_gemma":0.0056882557,"teacher_disagreement_score":0.004578608,"about_ca_system_score_codex":0.0005730456,"about_ca_system_score_gemma":0.0008226599,"threshold_uncertainty_score":0.009103954},"labels":[],"label_agreement":null},{"id":"W2047674282","doi":"10.1023/b:jopc.0000016254.58189.2a","title":"Physical and Kinetic Properties of the Family 3 β-Glucosidase from Aspergillus niger Which Is Important for Cellulose Breakdown","year":2004,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Cellobiose; Chemistry; Aspergillus niger; Substrate (aquarium); Cellulase; Hydrolysis; Enzyme; Chromatography; Stereochemistry; Fucose; Cellulose; Dimer; Salicin; Nuclear chemistry; Organic chemistry; Galactose; Biochemistry; Biology","score_opus":0.009811357751758539,"score_gpt":0.20929828834630038,"score_spread":0.19948693059454184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047674282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99510515,0.0010724143,0.0016064966,0.00008808913,0.000022089866,0.000008897611,0.0006782176,0.00002181145,0.0013967978],"genre_scores_gemma":[0.9963798,0.00037176194,0.0005806047,0.00002302464,0.000008287842,0.000005752165,0.0014556776,0.000012689939,0.0011623784],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990463,0.000014870121,0.000009188077,0.000020456675,0.000028013596,0.000022802862],"domain_scores_gemma":[0.99975115,0.00008710574,0.000046977835,0.000026019248,0.00003976014,0.000049012262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011638542,0.00025740615,0.00010665634,0.00023947489,0.00015355814,0.00031125348,0.00019548336,0.00020090492,0.00078086293],"category_scores_gemma":[0.0003529731,0.00013886197,0.00028041194,0.00031121075,0.0002146942,0.00021005467,0.00009666259,0.0005524916,0.000257482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025401724,0.000041756986,0.00075364165,0.000021200578,0.000005089284,0.000072224095,0.000019075327,0.00019336797,0.99728215,0.00012396977,0.000053972763,0.0011793915],"study_design_scores_gemma":[0.000016522587,0.00019904318,0.02244332,0.000007297087,0.000019079165,0.0005168124,0.000060546663,0.0015033231,0.9737342,0.0002080118,0.0012774798,0.000014462308],"about_ca_topic_score_codex":0.0023953016,"about_ca_topic_score_gemma":0.00073882454,"teacher_disagreement_score":0.0023953016,"about_ca_system_score_codex":0.00027889514,"about_ca_system_score_gemma":0.00016859375,"threshold_uncertainty_score":0.0047626495},"labels":[],"label_agreement":null},{"id":"W2049919198","doi":"10.1007/s10930-008-9129-0","title":"On the Relation Between the Predicted Secondary Structure and the Protein Size","year":2008,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Protein secondary structure; Protein structure; Protein structure prediction; Protein tertiary structure; Function (biology); BETA (programming language); Alpha (finance); Structure function; Chemistry; Biological system; Mathematics; Physics; Biology; Statistics; Computer science; Biochemistry; Genetics","score_opus":0.005337289902904936,"score_gpt":0.19791543538938736,"score_spread":0.19257814548648242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049919198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.880268,0.005159168,0.104691476,0.0009672996,0.00020219946,0.000042511107,0.0010232815,0.00075086387,0.0068952846],"genre_scores_gemma":[0.98565334,0.0009316197,0.011474992,0.000118123724,0.00013625188,0.00001757994,0.00082357664,0.00012029164,0.0007242012],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9988992,0.00038203498,0.00007343593,0.00031043187,0.00028575613,0.00004905332],"domain_scores_gemma":[0.8515828,0.14311223,0.0016683493,0.0012111143,0.00196529,0.0004601922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033255147,0.0005877897,0.0008166408,0.0016151236,0.00039425303,0.0010715725,0.00078177085,0.0010097928,0.0037082974],"category_scores_gemma":[0.036225654,0.00040531618,0.00048842386,0.00090592843,0.00084888766,0.0014489016,0.00047464206,0.0014834349,0.0012804936],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059155617,0.0005304076,0.3258593,0.0010685986,0.00092215865,0.0017571513,0.0004942557,0.19378573,0.27933854,0.016290192,0.0037579783,0.17028007],"study_design_scores_gemma":[0.00010852277,0.0009237597,0.1653289,0.00012004589,0.00046488596,0.0034782127,0.00011330349,0.7429712,0.06559222,0.018627752,0.002102224,0.00016900776],"about_ca_topic_score_codex":0.0005296034,"about_ca_topic_score_gemma":0.0007272353,"teacher_disagreement_score":0.0037082974,"about_ca_system_score_codex":0.0003553068,"about_ca_system_score_gemma":0.00020763745,"threshold_uncertainty_score":0.017587245},"labels":[],"label_agreement":null},{"id":"W2053229995","doi":"10.1007/s10930-008-9147-y","title":"Single Molecule Assays Reveal Differences Between In Vitro and In Vivo Synthesized β-Galactosidase","year":2008,"lang":"en","type":"article","venue":"The Protein Journal","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg; University of Manitoba","funders":"","keywords":"In vivo; Enzyme; In vitro; Molecular biology; Biochemistry; Enzyme assay; Escherichia coli; Chemistry; Biology; Gene","score_opus":0.014871523919700352,"score_gpt":0.2530192963113063,"score_spread":0.23814777239160598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053229995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84284097,0.0020116793,0.14443158,0.0007144333,0.00036418746,0.00007126426,0.0018068915,0.0013505827,0.0064084036],"genre_scores_gemma":[0.9406984,0.0010218377,0.043274585,0.00039274804,0.000045549532,0.0001310328,0.0033271753,0.0009241038,0.010184584],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916327,0.000121528516,0.000089654466,0.00028230288,0.00023009576,0.0001131314],"domain_scores_gemma":[0.99796414,0.00094439025,0.00030897075,0.0002845023,0.00020515006,0.00029291425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008989803,0.0010657355,0.0008221309,0.00042237097,0.00034192717,0.00171586,0.00075126876,0.0010482101,0.0021507915],"category_scores_gemma":[0.001219321,0.00063301774,0.0006926588,0.0003640748,0.0008427547,0.00092410203,0.00052626384,0.0030799608,0.0015159725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003158424,0.000012513025,0.00006998907,0.000023859913,0.0000066405873,0.000016095522,0.000013521267,0.000026344658,0.9992391,0.00015668178,0.000028596693,0.0003750632],"study_design_scores_gemma":[0.000002127655,0.000011879303,0.0003866631,0.0000017700052,0.0000047300623,0.0000384863,0.000006139958,0.00020045465,0.99890363,0.000040853203,0.0004003267,0.0000028574323],"about_ca_topic_score_codex":0.0006848481,"about_ca_topic_score_gemma":0.0010882849,"teacher_disagreement_score":0.0021507915,"about_ca_system_score_codex":0.0009191192,"about_ca_system_score_gemma":0.00036549364,"threshold_uncertainty_score":0.0071951747},"labels":[],"label_agreement":null},{"id":"W2055711823","doi":"10.1007/s10930-011-9376-3","title":"Structural and Functional Properties of Glycerol-3-Phosphate Dehydrogenase from a Mammalian Hibernator","year":2011,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Biology; Torpor; DHAP; Biochemistry; Dehydrogenase; NAD+ kinase; Enzyme; Denaturation (fissile materials); Glycerol-3-phosphate dehydrogenase; Molecular biology; Chemistry; Endocrinology","score_opus":0.045411642642343916,"score_gpt":0.2245961956042242,"score_spread":0.1791845529618803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055711823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99841285,0.00049927447,0.0003654289,0.00006347163,0.000012799452,0.0000044573253,0.00029141115,0.00000821653,0.0003418952],"genre_scores_gemma":[0.9948775,0.00036466244,0.0005385649,0.000037394777,0.000014377565,0.0000058570963,0.002907319,0.000015042535,0.0012393185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999459,0.0000079303545,0.0000063251264,0.000020556281,0.000009007668,0.0000102864815],"domain_scores_gemma":[0.99980825,0.00004629302,0.000042208194,0.00002241188,0.000027050417,0.000053810494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015855228,0.00029609373,0.0002539987,0.00018445431,0.00026088345,0.000347218,0.0003365212,0.00024559486,0.00066832517],"category_scores_gemma":[0.00021862506,0.0001476542,0.00036029643,0.00026821395,0.00035383017,0.00027628063,0.00019193739,0.00049386104,0.00024655563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011013794,0.00005008629,0.0028655895,0.000057712063,0.000027351898,0.00025766643,0.00014663451,0.00027290315,0.9933113,0.00034469154,0.00008134026,0.0014834863],"study_design_scores_gemma":[0.000058296304,0.0008930442,0.071312584,0.000019584144,0.00010500452,0.0017524078,0.00044633241,0.0045184805,0.9151325,0.0004202685,0.00530044,0.00004095255],"about_ca_topic_score_codex":0.0015783514,"about_ca_topic_score_gemma":0.00079566246,"teacher_disagreement_score":0.0015783514,"about_ca_system_score_codex":0.00032899927,"about_ca_system_score_gemma":0.00017343066,"threshold_uncertainty_score":0.0031383038},"labels":[],"label_agreement":null},{"id":"W2076132565","doi":"10.1007/s10930-006-9016-5","title":"Quantitative Analysis of the Conservation of the Tertiary Structure of Protein Segments","year":2006,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Alberta","funders":"","keywords":"Protein Data Bank; Set (abstract data type); Protein Data Bank (RCSB PDB); Sequence (biology); Protein structure; Protein structure prediction; Benchmark (surveying); Data set; Algorithm; Structural alignment; Combinatorics; Mathematics; Computer science; Pattern recognition (psychology); Crystallography; Biology; Sequence alignment; Artificial intelligence; Chemistry; Peptide sequence; Geography; Cartography","score_opus":0.0049530132775218,"score_gpt":0.22777489104016907,"score_spread":0.22282187776264728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076132565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9817467,0.000201147,0.017431779,0.000035417506,0.0000059674153,0.0000069560933,0.00018631447,0.00005973488,0.00032602335],"genre_scores_gemma":[0.99464583,0.000052342006,0.004641553,0.000012878245,0.0000056479416,0.000008973025,0.00031442367,0.000020251051,0.00029795108],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999759,0.00005630883,0.000008895851,0.00008380755,0.00006745258,0.00002450935],"domain_scores_gemma":[0.9982576,0.0010231913,0.00030436376,0.00013872933,0.00016146165,0.00011464894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006347933,0.00016987127,0.00025510346,0.00055374263,0.00017440175,0.00040135358,0.00032940978,0.0003239528,0.0009709386],"category_scores_gemma":[0.0014632648,0.00013729074,0.00021229143,0.00038348732,0.00044981984,0.00039415082,0.00016572862,0.0004902271,0.00012301089],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007165352,0.000090970905,0.0074426164,0.00009191983,0.00005713711,0.000034288263,0.000039443312,0.005853175,0.9719296,0.0013497958,0.00009184402,0.012302702],"study_design_scores_gemma":[0.000084888285,0.00092345016,0.22205944,0.0000143177,0.00013574467,0.00068165595,0.00008906564,0.27469558,0.49694532,0.0030424637,0.0012630845,0.00006500509],"about_ca_topic_score_codex":0.00079985074,"about_ca_topic_score_gemma":0.00095446204,"teacher_disagreement_score":0.0009709386,"about_ca_system_score_codex":0.0005328501,"about_ca_system_score_gemma":0.00020004206,"threshold_uncertainty_score":0.003866136},"labels":[],"label_agreement":null},{"id":"W2083299769","doi":"10.1007/s10930-006-9060-1","title":"Analysis of Protein Three-Dimension Structure Using Amino Acids Depths","year":2007,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Nankai University; Tianjin University; Natural Sciences and Engineering Research Council of Canada; Mitacs; National Natural Science Foundation of China","keywords":"Amino acid residue; Amino acid; Protein structure prediction; Protein structure; Dimension (graph theory); Residue (chemistry); Biological system; Chemistry; Mathematics; Peptide sequence; Biology; Biochemistry; Combinatorics","score_opus":0.009015067726012406,"score_gpt":0.2553170550466521,"score_spread":0.24630198732063968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083299769","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49165928,0.0005377759,0.5041037,0.00014983364,0.000023803721,0.00005587981,0.0005911759,0.0016795596,0.0011989669],"genre_scores_gemma":[0.72568077,0.0003283217,0.2725314,0.000028688566,0.000007029913,0.000039556824,0.00062858657,0.00018308865,0.00057248364],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998845,0.000021426085,0.0000071877716,0.000021461628,0.000047085567,0.000018410401],"domain_scores_gemma":[0.99972945,0.00008848288,0.000040833515,0.000041350286,0.000057872137,0.000041941094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037970114,0.0005164881,0.00044915872,0.0015789121,0.00043698226,0.00064417534,0.0004197501,0.0003044188,0.0009884118],"category_scores_gemma":[0.00068951625,0.0002669361,0.00050435495,0.0008711183,0.00031470848,0.00071968796,0.00068012736,0.0005121251,0.00022354847],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010895157,0.00015189424,0.017286897,0.00034753061,0.00023949546,0.0003254015,0.0005076806,0.03943712,0.70442784,0.016069688,0.0014219256,0.21869504],"study_design_scores_gemma":[0.000035500492,0.00012033704,0.018627757,0.00001641231,0.000078056895,0.0003508963,0.00016533062,0.86359936,0.10269199,0.011511554,0.0027573374,0.00004547958],"about_ca_topic_score_codex":0.0018508787,"about_ca_topic_score_gemma":0.0022332624,"teacher_disagreement_score":0.0018508787,"about_ca_system_score_codex":0.00044624705,"about_ca_system_score_gemma":0.00046969613,"threshold_uncertainty_score":0.0036802888},"labels":[],"label_agreement":null},{"id":"W2084310662","doi":"10.1007/s10930-014-9542-5","title":"Degradation of M r 25,000 Protein by Cathepsin L-like Protease in Xenopus laevis Oocytes","year":2014,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Antipain; Protease; Xenopus; Phosvitin; Leupeptin; Proteases; Cathepsin; Biology; Cathepsin L; Calpain; Protein degradation; Biochemistry; Proteolysis; Molecular biology; Cathepsin B; Cathepsin D; Cytoplasm; Cell biology; Enzyme","score_opus":0.006087460313962303,"score_gpt":0.21348292871266938,"score_spread":0.2073954683987071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084310662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902879,0.0030160306,0.0025645904,0.00032194928,0.000081127335,0.00004630796,0.00054091157,0.00012240683,0.0030187557],"genre_scores_gemma":[0.98523545,0.0013264442,0.002285278,0.000113738344,0.000042150386,0.00004661046,0.001045444,0.000080369624,0.009824525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982315,0.000023108903,0.000027715932,0.00004142845,0.000028650898,0.00005596306],"domain_scores_gemma":[0.99973506,0.000074068026,0.000069542526,0.000031335585,0.00003675634,0.00005320805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000457972,0.0004060668,0.0003208888,0.00043010793,0.00037244218,0.00097565254,0.00042573785,0.00059264724,0.0015036244],"category_scores_gemma":[0.00031327666,0.0003046319,0.00048417342,0.00020089553,0.0003620252,0.0006414852,0.00017551413,0.0009511445,0.0006511922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032476234,0.000026486403,0.00015611613,0.00005464733,0.000010516881,0.0001491382,0.000068545196,0.000037312548,0.998212,0.00036341092,0.000053777843,0.0005433973],"study_design_scores_gemma":[0.000052030784,0.00018151039,0.002449622,0.000014602006,0.000019798386,0.0003165015,0.0000666338,0.00055734866,0.99366695,0.00009871589,0.002568509,0.0000078318435],"about_ca_topic_score_codex":0.0031858513,"about_ca_topic_score_gemma":0.003098303,"teacher_disagreement_score":0.0031858513,"about_ca_system_score_codex":0.0013279326,"about_ca_system_score_gemma":0.00056811085,"threshold_uncertainty_score":0.009634852},"labels":[],"label_agreement":null},{"id":"W2097243165","doi":"10.1007/s10930-006-9029-0","title":"Sequence Representation and Prediction of Protein Secondary Structure for Structural Motifs in Twilight Zone Proteins","year":2006,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Protein secondary structure; Representation (politics); Computer science; Protein structure prediction; Sequence (biology); Artificial intelligence; Pattern recognition (psychology); Structural motif; Protein structure; Algorithm; Biology; Genetics","score_opus":0.007990039470912133,"score_gpt":0.24110989272389133,"score_spread":0.23311985325297918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097243165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97819513,0.00024180215,0.020049276,0.000057024747,0.000016944421,0.000046129342,0.00057142065,0.00026648992,0.00055579736],"genre_scores_gemma":[0.9712157,0.00012761872,0.025181241,0.000025429568,0.000016595395,0.00003510626,0.0023897085,0.00007352432,0.0009351653],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99993277,0.000015896654,0.000006239252,0.000017018536,0.000014491376,0.000013630873],"domain_scores_gemma":[0.9996413,0.000086103144,0.00006769137,0.000024687062,0.00007507557,0.0001051305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021269644,0.00030247035,0.00038433346,0.00074611715,0.00039945578,0.00041013243,0.00027728418,0.00035110323,0.0014036213],"category_scores_gemma":[0.00049245264,0.00013838559,0.00047593281,0.0004987165,0.0001714497,0.0001698005,0.00012788411,0.00045791728,0.0006661685],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015488631,0.00014311397,0.0045749196,0.00015044486,0.000033757526,0.0005679934,0.00020920792,0.004031487,0.9721024,0.0008637893,0.00047224617,0.015301827],"study_design_scores_gemma":[0.00026071983,0.0019067195,0.09450921,0.000073040595,0.00030879473,0.0023805313,0.0004586164,0.22284566,0.6636966,0.0020298741,0.011439716,0.000090578746],"about_ca_topic_score_codex":0.0012586795,"about_ca_topic_score_gemma":0.0013923635,"teacher_disagreement_score":0.0014036213,"about_ca_system_score_codex":0.0002825791,"about_ca_system_score_gemma":0.00032746472,"threshold_uncertainty_score":0.0046955943},"labels":[],"label_agreement":null},{"id":"W2100284529","doi":"10.1007/s10930-009-9216-x","title":"Studies of Glu-416 Variants of β-Galactosidase (E. coli) Show that the Active Site Mg2+ is Not Important for Structure and Indicate that the Main Role of Mg2+ is to Mediate Optimization of Active Site Chemistry","year":2009,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Enzyme Catalysis and Immobilization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Directorate for Biological Sciences; University of Calgary","keywords":"Active site; Chemistry; Glutamine; Stereochemistry; Substrate (aquarium); Enzyme; Valine; Biochemistry; Amino acid; Biology","score_opus":0.012264688901541795,"score_gpt":0.2554997364181713,"score_spread":0.2432350475166295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100284529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940439,0.00062257535,0.003312329,0.000093308234,0.000032326083,0.000015020014,0.00042057797,0.00004004294,0.0014198447],"genre_scores_gemma":[0.99347913,0.0003370802,0.001998748,0.000044999946,0.000006523598,0.000009318281,0.0016022817,0.000106370775,0.002415491],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997266,0.00006364242,0.000034220062,0.000044382818,0.00008340863,0.000047786816],"domain_scores_gemma":[0.9997756,0.000058976286,0.000053559663,0.000034751043,0.000028954782,0.000048164613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002239709,0.0007447231,0.000389136,0.00017880414,0.00026204213,0.0005000672,0.00060706487,0.0003962787,0.0013167182],"category_scores_gemma":[0.0003466182,0.00019244886,0.00044398807,0.00042313503,0.00038202686,0.00025450898,0.000275885,0.00087196985,0.0006387907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000490137,0.00009024715,0.0005788837,0.000064386906,0.00003455272,0.00021086624,0.00006320409,0.0002234559,0.99639434,0.00031708129,0.00006045315,0.0014723435],"study_design_scores_gemma":[0.000010387971,0.00016867703,0.0014707446,0.0000034743982,0.000018923505,0.00040265018,0.00004461916,0.00058129453,0.995526,0.00006520996,0.001699768,0.000008213504],"about_ca_topic_score_codex":0.0018712104,"about_ca_topic_score_gemma":0.0013020706,"teacher_disagreement_score":0.0018712104,"about_ca_system_score_codex":0.00043827549,"about_ca_system_score_gemma":0.00016389672,"threshold_uncertainty_score":0.0044049025},"labels":[],"label_agreement":null},{"id":"W2253666176","doi":"10.1007/s10930-016-9647-0","title":"Post-translational Regulation of Hexokinase Function and Protein Stability in the Aestivating Frog Xenopus laevis","year":2016,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Xenopus; Phosphorylation; Hexokinase; Glycolysis; Biology; Thermostability; Oxidative phosphorylation; Cell biology; Phosphoserine; Biochemistry; Protein phosphorylation; Enzyme; Protein kinase A","score_opus":0.02176522254989034,"score_gpt":0.25473541805165234,"score_spread":0.232970195501762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2253666176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99703896,0.0013098137,0.0006525107,0.00010355428,0.000017992787,0.00000479292,0.00018550712,0.000032808748,0.00065403676],"genre_scores_gemma":[0.9959454,0.00043521184,0.0006284299,0.00006693529,0.000012219059,0.000010011202,0.00033143256,0.000036927475,0.0025333671],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999101,0.00001629207,0.000008834258,0.000029995495,0.000012855606,0.000021864911],"domain_scores_gemma":[0.9998387,0.000025882779,0.00006134419,0.000017106002,0.000024878456,0.000032019416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015477354,0.00024049127,0.00021587327,0.000216568,0.00032023477,0.0005244241,0.00016537533,0.00022903366,0.0014990631],"category_scores_gemma":[0.00016124157,0.00018340872,0.00022477398,0.000116026604,0.0003363725,0.00044006415,0.00020941354,0.0004909926,0.00032278252],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004076341,0.000012828164,0.00063973956,0.000026209114,0.000007950511,0.000048831236,0.000040959712,0.000052355455,0.9974788,0.00032428183,0.000039229668,0.00092127325],"study_design_scores_gemma":[0.000051872645,0.00034344516,0.07487002,0.000014139544,0.00004169078,0.000283754,0.00016030831,0.0014933823,0.9187649,0.00030678135,0.0036466457,0.000023046396],"about_ca_topic_score_codex":0.0016159281,"about_ca_topic_score_gemma":0.0024742784,"teacher_disagreement_score":0.0016159281,"about_ca_system_score_codex":0.0006657474,"about_ca_system_score_gemma":0.00018227813,"threshold_uncertainty_score":0.005014837},"labels":[],"label_agreement":null},{"id":"W2556099291","doi":"10.1007/s10930-016-9689-3","title":"Purification and Characterization of Lactate Dehydrogenase in the Foot Muscle and Hepatopancreas of Otala lactea","year":2016,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Hepatopancreas; Lactate dehydrogenase; Biochemistry; Snail; Biology; Glycolysis; Anaerobic exercise; Enzyme; Ecology","score_opus":0.01236758778240889,"score_gpt":0.1966698614288094,"score_spread":0.1843022736464005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2556099291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99573356,0.0013087431,0.0011939734,0.000088116605,0.000024448547,0.000017854065,0.0006333946,0.000023875069,0.00097603136],"genre_scores_gemma":[0.98611265,0.0008053618,0.001985241,0.000092107075,0.00002841098,0.000023232771,0.0030529671,0.000033928663,0.007865979],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998982,0.00000577783,0.000008666671,0.00003043009,0.00002081421,0.000036042526],"domain_scores_gemma":[0.99982065,0.000024265673,0.000034964134,0.000014812527,0.000050978342,0.000054329594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012686133,0.00041743793,0.00037026498,0.0005331783,0.00035014623,0.00056998665,0.00026143272,0.00019403879,0.0005096537],"category_scores_gemma":[0.00020925008,0.00023041399,0.0003640741,0.00038770892,0.0003113903,0.00038333182,0.00044706947,0.00052986946,0.00037441673],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017662426,0.000018040862,0.0020405764,0.000047865724,0.000009466245,0.00011846531,0.000090787034,0.000027337572,0.9959526,0.0000358641,0.000021591835,0.0014606189],"study_design_scores_gemma":[0.000036100806,0.00084132963,0.38392618,0.000042441676,0.00012886542,0.0013170007,0.0011557085,0.0015985756,0.60261196,0.00018314278,0.008123813,0.000034742417],"about_ca_topic_score_codex":0.01020258,"about_ca_topic_score_gemma":0.010591431,"teacher_disagreement_score":0.01020258,"about_ca_system_score_codex":0.00044358303,"about_ca_system_score_gemma":0.00035749222,"threshold_uncertainty_score":0.020286381},"labels":[],"label_agreement":null},{"id":"W2763787159","doi":"10.1007/s10930-017-9743-9","title":"Characterization of a Novel Alkalophilic Lipase From Aneurinibacillus thermoaerophilus: Lid Heterogeneity and Assignment to Family I.5","year":2017,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Enzyme Catalysis and Immobilization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Wilfrid Laurier University; Université du Québec à Trois-Rivières; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipase; Active site; Enzyme; Chemistry; Biochemistry; Protein secondary structure; Hydrolase; Multiple sequence alignment; Thermostability; Circular dichroism; Protein superfamily; In silico; Stereochemistry; Peptide sequence; Sequence alignment; Gene","score_opus":0.022805392779854893,"score_gpt":0.2566623309354018,"score_spread":0.23385693815554692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763787159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99530727,0.0004321125,0.0021315834,0.00011385609,0.00001287369,0.000026779566,0.0012404837,0.000035357018,0.0006997122],"genre_scores_gemma":[0.98955965,0.0002775553,0.0037337607,0.000053942287,0.000007918631,0.000023205686,0.004509526,0.000018563363,0.0018159675],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999298,0.000010461194,0.0000092226965,0.000016791526,0.000015563484,0.000018107723],"domain_scores_gemma":[0.99987173,0.000023745904,0.00003308572,0.000013385265,0.000028098264,0.00002988872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009519598,0.0002679098,0.00019813339,0.00033729445,0.00013150205,0.00041712346,0.00018586247,0.00022027847,0.0005653716],"category_scores_gemma":[0.00018523776,0.00009791809,0.00034087396,0.0002825395,0.00012160437,0.00017821522,0.00020038741,0.00024999623,0.0003613366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012390355,0.000018811563,0.0011770473,0.000022711365,0.000005669351,0.00015558516,0.00004196329,0.000052579773,0.9969158,0.000039356626,0.000048567905,0.0013978695],"study_design_scores_gemma":[0.0000146040575,0.00032815777,0.043549553,0.000016980794,0.000047010442,0.0014929875,0.00037241486,0.0015404793,0.94695216,0.00007571,0.0055913134,0.000018742632],"about_ca_topic_score_codex":0.002155899,"about_ca_topic_score_gemma":0.0010773661,"teacher_disagreement_score":0.002155899,"about_ca_system_score_codex":0.00025627972,"about_ca_system_score_gemma":0.00020991672,"threshold_uncertainty_score":0.0042867064},"labels":[],"label_agreement":null},{"id":"W3093706645","doi":"10.1007/s10930-020-09934-9","title":"Purification and Regulation of Pyruvate Kinase from the Foot Muscle of the Anoxia and Freeze Tolerant Marine Snail, Littorina littorea","year":2020,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Anoxic waters; Snail; Pyruvate kinase; Biology; Biochemistry; Allosteric regulation; Littorina; Glycolysis; Threonine; Enzyme; Ecology; Mollusca; Serine","score_opus":0.017349073681060107,"score_gpt":0.18781527063076706,"score_spread":0.17046619694970694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093706645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99831223,0.00031257485,0.00042174532,0.00007264072,0.000007731123,0.000008093505,0.00016182767,0.000007811886,0.00069525465],"genre_scores_gemma":[0.9938724,0.00036081573,0.000874613,0.00007311753,0.000008610533,0.00001306609,0.001023027,0.000011796149,0.003762548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999455,0.0000068540035,0.000005348798,0.000016088065,0.000011596399,0.000014573163],"domain_scores_gemma":[0.9998969,0.000017245773,0.000031087635,0.000010253178,0.000020677056,0.000023902914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009069794,0.00019161958,0.0001446676,0.00022680752,0.0002203541,0.0003612736,0.00014036322,0.00013753536,0.00059621345],"category_scores_gemma":[0.000136044,0.00016424387,0.00013812246,0.0001349068,0.0002708376,0.00026152996,0.00028465496,0.0003667493,0.00022476885],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010420501,0.000012433876,0.0012765486,0.000027457074,0.00000350832,0.000039002563,0.000050666702,0.000030772524,0.99761593,0.00006547517,0.000025387928,0.0007485148],"study_design_scores_gemma":[0.000059746082,0.0004930053,0.4388831,0.000030626565,0.00003341561,0.00080020603,0.000570911,0.0020732896,0.5517522,0.0002809148,0.005003003,0.000019562065],"about_ca_topic_score_codex":0.0018700208,"about_ca_topic_score_gemma":0.003712094,"teacher_disagreement_score":0.0018700208,"about_ca_system_score_codex":0.00028602334,"about_ca_system_score_gemma":0.00022353293,"threshold_uncertainty_score":0.0037183166},"labels":[],"label_agreement":null},{"id":"W3114211370","doi":"10.1007/s10930-020-09944-7","title":"Oxidative Damage? Not a Problem! The Characterization of Humanin-like Mitochondrial Peptide in Anoxia Tolerant Freshwater Turtles","year":2021,"lang":"en","type":"article","venue":"The Protein Journal","topic":"GDF15 and Related Biomarkers","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Mitochondrion; Oxidative phosphorylation; Cell biology; Reactive oxygen species; Organelle; Apoptosis; Biochemistry","score_opus":0.013153938810331868,"score_gpt":0.2355956011269609,"score_spread":0.22244166231662904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3114211370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968286,0.0016611875,0.00062746095,0.0004933576,0.000057016932,0.0000064728506,0.00012569538,0.000012645736,0.00018751934],"genre_scores_gemma":[0.9965417,0.00075481564,0.0010733835,0.00038655294,0.000039546718,0.000009381549,0.00021405194,0.000008267241,0.0009723938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999473,0.000009037039,0.000006142857,0.000015127093,0.000008373413,0.000013946779],"domain_scores_gemma":[0.9997913,0.000018208764,0.00007222457,0.00001327655,0.000033820415,0.00007113406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029172614,0.0003046496,0.00016586472,0.00024418204,0.00020725965,0.0003026509,0.00022242167,0.00047978607,0.00084835035],"category_scores_gemma":[0.00026128147,0.000086920605,0.00016356418,0.0001292397,0.0004727298,0.00034193567,0.00030041666,0.00052035257,0.00012995051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074682815,0.00004616077,0.06517491,0.00017349402,0.00011793323,0.0012243192,0.0003042201,0.00009892983,0.9208068,0.00026758935,0.00042923438,0.010609584],"study_design_scores_gemma":[0.00006271153,0.0026066427,0.82021075,0.00009751618,0.00016261634,0.007882797,0.0014854524,0.0005861012,0.15390591,0.0011257957,0.011829813,0.000043900323],"about_ca_topic_score_codex":0.0005693907,"about_ca_topic_score_gemma":0.0009339552,"teacher_disagreement_score":0.00084835035,"about_ca_system_score_codex":0.00017432628,"about_ca_system_score_gemma":0.00012869161,"threshold_uncertainty_score":0.0028380156},"labels":[],"label_agreement":null},{"id":"W3120563036","doi":"10.1007/s10930-020-09953-6","title":"Structure-Based Identification of Potential Drugs Against FmtA of Staphylococcus aureus: Virtual Screening, Molecular Dynamics, MM-GBSA, and QM/MM","year":2021,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":145,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Council of Scientific and Industrial Research, India","keywords":"Teichoic acid; Chemistry; Virtual screening; Staphylococcus aureus; Stereochemistry; Biophysics; Biochemistry; Peptidoglycan; Pharmacophore; Cell wall; Biology; Bacteria","score_opus":0.006062070479929768,"score_gpt":0.23933796404117835,"score_spread":0.2332758935612486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120563036","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9310034,0.0039852555,0.05124318,0.0011667461,0.00011011846,0.00037818024,0.0019916035,0.0016710883,0.008450329],"genre_scores_gemma":[0.9435821,0.0015714236,0.051569764,0.0002603684,0.000022968346,0.00022854042,0.0016086199,0.00009951652,0.0010568246],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99968505,0.00011528555,0.000017026867,0.00003985021,0.00009085218,0.000051967138],"domain_scores_gemma":[0.9997173,0.00013313319,0.000037179205,0.000023041322,0.000055041182,0.000034242334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009785817,0.001176381,0.002175085,0.00071353384,0.0005781047,0.0009375741,0.0013336138,0.00084202876,0.0019176973],"category_scores_gemma":[0.0012437423,0.0004237595,0.001470567,0.00081262016,0.0002769006,0.0005859305,0.0006014853,0.0008759046,0.00031704025],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013543131,0.0010973704,0.0060123308,0.0010849943,0.0005822885,0.0005808256,0.00012042128,0.86539894,0.06275266,0.00529416,0.0033183587,0.052403364],"study_design_scores_gemma":[0.00034665572,0.0007400035,0.001003863,0.00003805854,0.0001971498,0.00012643798,0.00005740391,0.9840412,0.0110515645,0.001109947,0.0012542688,0.000033435444],"about_ca_topic_score_codex":0.0040386356,"about_ca_topic_score_gemma":0.005469103,"teacher_disagreement_score":0.0040386356,"about_ca_system_score_codex":0.0008638478,"about_ca_system_score_gemma":0.0016048966,"threshold_uncertainty_score":0.008030236},"labels":[],"label_agreement":null},{"id":"W4400458746","doi":"10.1007/s10930-024-10214-z","title":"Multiple Protein Profiler 1.0 (MPP): A Webserver for Predicting and Visualizing Physiochemical Properties of Proteins at the Proteome Level","year":2024,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bell (Canada); Canadian Bioethics Society; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Research Nova Scotia; Canadian Institutes of Health Research; Dalhousie University; Genome Canada; Dalhousie Medical Research Foundation","keywords":"Proteome; Visualization; Computer science; Computational biology; Profiling (computer programming); Bioinformatics; Biology; Data mining; Operating system","score_opus":0.04909545888236236,"score_gpt":0.2917700585916594,"score_spread":0.24267459970929703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400458746","genre_codex":"software","genre_gemma":"software","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"software","genre_consensus":"software","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016330993,0.0014786769,0.17450345,0.00029491496,0.000158351,0.00037930792,0.12996097,0.6701668,0.006726459],"genre_scores_gemma":[0.09253612,0.0029428322,0.44737086,0.0010692439,0.00019650496,0.0028420785,0.32373515,0.11503959,0.014267647],"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99902713,0.00012421807,0.00010104311,0.00024301429,0.000401971,0.000102702645],"domain_scores_gemma":[0.9987381,0.00048703642,0.00020421758,0.00021474234,0.00021193892,0.00014397826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022853839,0.003991715,0.0025034037,0.004934816,0.0008598566,0.0023700274,0.003129367,0.0014546869,0.02677011],"category_scores_gemma":[0.0029413411,0.0015983902,0.0014082501,0.003305621,0.000394916,0.0041477284,0.0026867955,0.003137461,0.022231793],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005004304,0.0006534522,0.010787258,0.005526345,0.0011984,0.0019190392,0.00080905436,0.0035149702,0.18172005,0.008719475,0.5395469,0.24060069],"study_design_scores_gemma":[0.0009790271,0.000633878,0.040228203,0.00086797983,0.0005428437,0.004149107,0.00028182793,0.12434665,0.29793543,0.025891274,0.5032135,0.00093029044],"about_ca_topic_score_codex":0.0010998484,"about_ca_topic_score_gemma":0.0012015083,"teacher_disagreement_score":0.02677011,"about_ca_system_score_codex":0.0005662657,"about_ca_system_score_gemma":0.0011045061,"threshold_uncertainty_score":0.089554965},"labels":[],"label_agreement":null},{"id":"W4401668619","doi":"10.1007/s10930-024-10221-0","title":"Structural, Biochemical, and Phylogenetic Analysis of Bacterial and Fungal Carbohydrate Esterase Family 15 Glucuronoyl Esterases in the Rumen","year":2024,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canadian Light Source","keywords":"Rumen; Biology; Biochemistry; Esterase; Enzyme; Cellulase; Glycoside hydrolase; Bacteria; Structural similarity; Ruminococcus; Microbiology; Genetics; Fermentation","score_opus":0.010834092527267693,"score_gpt":0.21218567588296613,"score_spread":0.20135158335569844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401668619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99802834,0.0006324064,0.0005440188,0.00002670328,0.0000028879479,0.000007516184,0.00034763553,0.0000061490805,0.00040421798],"genre_scores_gemma":[0.9954941,0.0006013432,0.0018431531,0.000026901402,0.000006903714,0.000007635639,0.0016044967,0.0000069561493,0.00040844898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998104,0.00003187872,0.000016029155,0.000046225086,0.000049977614,0.00004557758],"domain_scores_gemma":[0.99970526,0.000034130357,0.00009098555,0.000020859708,0.00006145727,0.00008730891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023796973,0.00033680617,0.00029164687,0.00064707315,0.00020249326,0.00041393848,0.00020324667,0.00035078236,0.00029199853],"category_scores_gemma":[0.00038332414,0.00015309264,0.00042369348,0.0008762355,0.0001661414,0.00027645347,0.00021898099,0.00032524168,0.0002129243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063521706,0.000104479775,0.028448172,0.000091719325,0.000050020968,0.0003235764,0.00022633221,0.0005947509,0.96064967,0.000117174284,0.000058940674,0.008699947],"study_design_scores_gemma":[0.000029549743,0.0007974395,0.7559067,0.000042889824,0.00022019428,0.0017338808,0.0012289195,0.011952112,0.22140367,0.00024731696,0.0063932966,0.000044007873],"about_ca_topic_score_codex":0.0025994119,"about_ca_topic_score_gemma":0.0020127755,"teacher_disagreement_score":0.0025994119,"about_ca_system_score_codex":0.00020287685,"about_ca_system_score_gemma":0.0002223939,"threshold_uncertainty_score":0.005168557},"labels":[],"label_agreement":null}]}