{"meta":{"query_hash":"4411a23dadac","filters":{"venue":"Viruses"},"cohort_total":907,"direct_labels_cover":6,"predictions_cover":907,"exported":907,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/4411a23dadac","api":"https://metacan.xera.ac/api/v1/cohort?venue=Viruses"},"results":[{"id":"W1551896540","doi":"10.3390/v7072790","title":"Resistance against Integrase Strand Transfer Inhibitors and Relevance to HIV Persistence","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Dolutegravir; Elvitegravir; Raltegravir; Integrase; Integrase inhibitor; Drug resistance; Virology; Biology; Drug; Medicine; Pharmacology; Genetics; Human immunodeficiency virus (HIV); Antiretroviral therapy; Viral load","score_opus":0.078721512924904,"score_gpt":0.33043320093932566,"score_spread":0.2517116880144217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1551896540","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002950517,0.993715,0.000020208941,0.00038752455,0.00013870535,0.0011612497,0.00016265581,0.0000802137,0.0040393844],"genre_scores_gemma":[0.000049568174,0.9801952,0.0010042896,0.00032862203,0.00014048045,0.00013782251,0.00009433032,0.00006605865,0.017983584],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99811643,0.00007130006,0.0005183248,0.00060593145,0.0003700126,0.0003180183],"domain_scores_gemma":[0.9988898,0.0001551985,0.00006261784,0.0003684325,0.00009567986,0.0004282753],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021010259,0.00051822804,0.0014762722,0.00024063882,0.000078618265,0.000041381125,0.00012241345,0.00019952065,0.000027859898],"category_scores_gemma":[0.00015658503,0.00036250302,0.0002179766,0.00037483944,0.00010152866,0.00009453258,0.00003346748,0.0002954443,0.00025865668],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015707176,0.0001526397,0.000069630725,0.010435727,0.0004991158,0.0003814879,0.0010143603,8.4521965e-8,0.0000071961713,0.00009171054,0.043022458,0.9441685],"study_design_scores_gemma":[0.00062895997,0.000053855798,0.000002477949,0.023054693,0.0009643487,0.000016838665,0.00012320031,1.3208478e-7,0.000035826164,0.0000054014604,0.97476274,0.00035154482],"about_ca_topic_score_codex":0.000003336127,"about_ca_topic_score_gemma":0.00006258082,"teacher_disagreement_score":0.94381696,"about_ca_system_score_codex":0.00024744286,"about_ca_system_score_gemma":0.0004925332,"threshold_uncertainty_score":0.9998827},"labels":[],"label_agreement":null},{"id":"W1557903127","doi":"10.3390/v7072778","title":"Plant Translation Factors and Virus Resistance","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":267,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; EIF4G; EIF4E; Eukaryotic translation; Genetics; RNA silencing; Translation (biology); Viral replication; Gene silencing; Virus; Virology; Computational biology; RNA; RNA interference; Cell biology; Gene; Messenger RNA","score_opus":0.3060115618127227,"score_gpt":0.3629078225538808,"score_spread":0.05689626074115811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1557903127","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006258413,0.99006563,6.931763e-8,0.000019105304,0.00006420963,0.00035116848,0.008334504,0.000068755515,0.00047073196],"genre_scores_gemma":[0.000011827122,0.99915385,0.000012317597,0.000023146586,0.00014632072,0.000032376585,0.00046346788,0.0000017501454,0.00015491161],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99862087,0.00016854654,0.00026709042,0.00034612304,0.0003173239,0.00028002224],"domain_scores_gemma":[0.99895346,0.00071120716,0.00012360212,0.00005215693,0.000030189738,0.00012935673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022921726,0.00030117674,0.00083318865,0.000026379243,0.00017114147,0.00008316966,0.00022598096,0.00017631795,0.000055319506],"category_scores_gemma":[0.000082752274,0.00008569757,0.00011609233,0.00024600743,0.00009079269,0.0001228155,0.000074113224,0.00019652791,0.000058153026],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013366121,0.000022640339,0.00001927319,0.0009066463,0.00006748245,0.000011671432,0.000040545354,7.793764e-9,0.0005819772,0.000032725722,0.009694718,0.98860896],"study_design_scores_gemma":[0.000025044088,0.00003627919,0.00006301249,0.0010205574,0.000068149966,0.000002716398,0.000019514648,1.2183901e-7,0.00003523161,0.00003903999,0.9984686,0.00022176045],"about_ca_topic_score_codex":0.00025794658,"about_ca_topic_score_gemma":0.0030533294,"teacher_disagreement_score":0.9887739,"about_ca_system_score_codex":0.000035993027,"about_ca_system_score_gemma":0.000025181882,"threshold_uncertainty_score":0.34946457},"labels":[],"label_agreement":null},{"id":"W1618770877","doi":"10.3390/v7082825","title":"The Virus-Host Interplay: Biogenesis of +RNA Replication Complexes","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Biology; Viral replication; Virus; Virology; RNA; Biogenesis; Genome; Chikungunya; Host factor; RNA virus; Coronavirus; Host factors; Dengue fever; Genetics; Gene; Coronavirus disease 2019 (COVID-19); Disease; Medicine; Infectious disease (medical specialty)","score_opus":0.09353355832347598,"score_gpt":0.40791396802244734,"score_spread":0.31438040969897135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1618770877","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008016156,0.99731123,0.000018456954,0.000075931086,0.00019789487,0.0009671549,0.0006404215,0.00005380544,0.00065493595],"genre_scores_gemma":[0.00014537228,0.998434,0.000029726774,0.0003048142,0.00036368665,0.00021002686,0.00015889414,0.000057737423,0.0002957396],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982079,0.00013519984,0.00071704126,0.00040744778,0.00031875793,0.00021362696],"domain_scores_gemma":[0.997334,0.00025305335,0.0005566313,0.0014907584,0.00021082026,0.00015475583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037445952,0.00030449228,0.0013308368,0.00011344405,0.00008503951,0.000035925048,0.0003606688,0.00015211897,0.00009420042],"category_scores_gemma":[0.00031641952,0.00017219564,0.0005505919,0.00026372515,0.00014441324,0.000041170497,0.00010449437,0.00013893496,0.00016723032],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009497616,0.000093759554,0.000024108176,0.003026868,0.00036700512,0.000004424076,0.000013042612,2.4370372e-8,0.00018892427,0.00053397083,0.013405226,0.98224765],"study_design_scores_gemma":[0.0002464549,0.0001336868,0.000050497172,0.0036605706,0.0020871449,0.000014403188,0.000023337796,0.000004164552,0.00013693384,0.000025311661,0.9934628,0.00015468716],"about_ca_topic_score_codex":0.0002715265,"about_ca_topic_score_gemma":0.00003372077,"teacher_disagreement_score":0.982093,"about_ca_system_score_codex":0.00007447826,"about_ca_system_score_gemma":0.00041442728,"threshold_uncertainty_score":0.70219344},"labels":[],"label_agreement":null},{"id":"W1950838216","doi":"10.3390/v7092856","title":"Conformational Masking and Receptor-Dependent Unmasking of Highly Conserved Env Epitopes Recognized by Non-Neutralizing Antibodies That Mediate Potent ADCC against HIV-1","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Institutes of Health; Bill and Melinda Gates Foundation","keywords":"Virology; Antibody-dependent cell-mediated cytotoxicity; Neutralization; Antibody; Biology; Effector; Epitope; Neutralizing antibody; Immunization; Virus; Immunology; Monoclonal antibody","score_opus":0.08729650803625864,"score_gpt":0.332190693214722,"score_spread":0.24489418517846334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1950838216","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033038654,0.9901039,0.000021807982,0.000049271468,0.00047353198,0.00090053084,0.0044204285,0.0000607316,0.0006659137],"genre_scores_gemma":[0.003474085,0.99054456,0.00013439475,0.000068988105,0.000044855326,0.00011282516,0.0050918492,0.000048229995,0.00048020823],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973038,0.00057517685,0.00088092126,0.00047400908,0.00017786337,0.00058822683],"domain_scores_gemma":[0.9980832,0.00062205124,0.00072244124,0.00031288594,0.00015529899,0.00010416981],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006922681,0.0005617227,0.0018423105,0.00032808338,0.00022915484,0.0000636267,0.00033161172,0.00050208095,0.00016165858],"category_scores_gemma":[0.00013444218,0.00042008472,0.00026273634,0.0001246709,0.00040516505,0.00023993927,0.00026902094,0.00047927958,0.00088454783],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028224138,0.00041995267,0.0009085145,0.008801293,0.0046487064,0.000054431846,0.0009890284,0.0000023126697,0.0054900637,0.000081342354,0.0335964,0.9447257],"study_design_scores_gemma":[0.0018484722,0.00015375686,0.00002440045,0.0052451985,0.00039655037,0.00004869533,0.00021517483,6.15119e-7,0.009615635,0.000010890001,0.9820037,0.00043691747],"about_ca_topic_score_codex":0.00017120747,"about_ca_topic_score_gemma":0.00002068553,"teacher_disagreement_score":0.9484073,"about_ca_system_score_codex":0.00012983855,"about_ca_system_score_gemma":0.00040440555,"threshold_uncertainty_score":0.99989337},"labels":[],"label_agreement":null},{"id":"W1966567607","doi":"10.3390/v6093377","title":"Is Resistance to Dolutegravir Possible When This Drug Is Used in First-Line Therapy?","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Gilead Sciences; Bristol-Myers Squibb","keywords":"Dolutegravir; Integrase; Integrase inhibitor; Drug resistance; Drug; Virology; Food and drug administration; Human immunodeficiency virus (HIV); Pharmacology; Medicine; Antiretroviral therapy; Pharmacotherapy; Resistance mutation; Viral load; Biology; Internal medicine; Genetics; Gene; Reverse transcriptase","score_opus":0.08767629477125227,"score_gpt":0.3627778801964917,"score_spread":0.27510158542523944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966567607","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017085442,0.99025774,0.000011939076,0.0035596734,0.00019633921,0.001918805,0.00015829323,0.00011246561,0.0036138892],"genre_scores_gemma":[0.000017181435,0.8621412,0.0014652831,0.0032112405,0.00022082079,0.00037011926,0.00009516183,0.00011411262,0.1323649],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971074,0.00012851293,0.00090387557,0.0008165775,0.0005235335,0.00052012503],"domain_scores_gemma":[0.9981829,0.0002894793,0.0002649481,0.00093474897,0.00007320097,0.0002547168],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003743567,0.00075931585,0.0025102403,0.0006128737,0.000109057895,0.000063408945,0.00034962784,0.00029384127,0.0018295713],"category_scores_gemma":[0.00006681664,0.0005046973,0.00047385256,0.00068500463,0.000049123155,0.00008828775,0.00008691212,0.0003799547,0.003010846],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018282556,0.00051577226,0.0032484739,0.008483425,0.00083282037,0.00016415649,0.005011396,4.772799e-8,0.0000019478855,0.00007266446,0.5580053,0.42348123],"study_design_scores_gemma":[0.0012437253,0.00006211404,0.000059542013,0.019227918,0.00036268943,0.0000056672106,0.000012918911,3.143294e-7,0.00015995576,0.00010108421,0.97828233,0.00048175975],"about_ca_topic_score_codex":0.00020763319,"about_ca_topic_score_gemma":0.00088397384,"teacher_disagreement_score":0.42299947,"about_ca_system_score_codex":0.00036284895,"about_ca_system_score_gemma":0.00045633738,"threshold_uncertainty_score":0.9997405},"labels":[],"label_agreement":null},{"id":"W1973828211","doi":"10.3390/v2091867","title":"JaPaFi: A Novel Program for the Identification of Highly Conserved DNA Sequences","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; University of Cambridge","keywords":"Genome; Computational biology; Biology; Conserved sequence; Identification (biology); Indel; Set (abstract data type); Matching (statistics); Genetics; Computer science; DNA; Base sequence; Mathematics; Gene","score_opus":0.09402778525121414,"score_gpt":0.3264323373369102,"score_spread":0.23240455208569605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973828211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99670815,0.00013874493,0.0000071973477,0.0015390646,0.00012068163,0.00060602935,0.0007694045,0.00005515607,0.00005554296],"genre_scores_gemma":[0.9990146,0.00008797948,0.0002654327,0.00012282064,0.00012000543,0.00026346717,0.000020968224,5.3112126e-7,0.000104150786],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992924,0.00001898459,0.00019448996,0.00014585469,0.00017694806,0.00017134906],"domain_scores_gemma":[0.99868274,0.0009959973,0.00010997912,0.00005849442,0.00012326715,0.00002950755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038399448,0.000070801616,0.0000991903,0.000007809286,0.00024166361,0.00006339641,0.00032445494,0.00004203049,0.000034110453],"category_scores_gemma":[0.0004863262,0.000019697743,0.000056117824,0.00017535425,0.00026661783,0.000094514406,0.00005099516,0.00007433021,0.000011766842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002301221,0.00007577735,0.0005066643,0.000006634427,0.000019778396,1.1444721e-7,0.000028109984,3.158796e-7,0.97169214,0.0006538662,0.0009267819,0.026066808],"study_design_scores_gemma":[0.00008989312,0.00014701534,0.050060954,0.0000067933347,0.00001271076,0.0000014649024,0.00018430091,0.00008922369,0.7804418,0.00027099933,0.16861738,0.000077438366],"about_ca_topic_score_codex":0.00063639553,"about_ca_topic_score_gemma":0.0027695254,"teacher_disagreement_score":0.19125031,"about_ca_system_score_codex":0.0000033673896,"about_ca_system_score_gemma":0.00001094789,"threshold_uncertainty_score":0.18587056},"labels":[],"label_agreement":null},{"id":"W1974771539","doi":"10.3390/v6093458","title":"A Filtration Based Technique for Simultaneous SEM and TEM Sample Preparation for the Rapid Detection of Pathogens","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Filtration (mathematics); Chromatography; Sample preparation; Limiting; Size-exclusion chromatography; Adsorption; Sample (material); Virus; Materials science; Chemistry; Analytical Chemistry (journal); Nanotechnology; Biology; Virology; Mathematics; Statistics; Biochemistry","score_opus":0.01659568900247576,"score_gpt":0.26394503338100084,"score_spread":0.24734934437852507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974771539","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16803871,0.000010554486,0.83080214,0.000051023788,0.00006331049,0.00085645256,0.00012388111,0.000018855013,0.000035098066],"genre_scores_gemma":[0.992213,0.000006826891,0.0073216697,0.00015396382,0.000029892852,0.00023874747,0.000009376756,0.000006405455,0.000020116882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996805,0.000019856378,0.000101343234,0.000104775994,0.000029894381,0.00006359895],"domain_scores_gemma":[0.999115,0.00070223515,0.00006728647,0.000090957554,0.000011711269,0.000012818922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012942977,0.00004939052,0.000051778043,0.000011962123,0.0001339868,0.000017340584,0.000036185305,0.000033389828,0.00007001013],"category_scores_gemma":[0.00018932731,0.000036723686,0.000031005657,0.000037393285,0.00003729143,0.00009132959,0.00000969864,0.000020024141,0.0000019026485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068122965,0.000017297993,0.000027394284,0.000009050931,0.0000027859555,1.0137076e-8,0.00004854146,0.0008322101,0.97652584,0.000008790074,0.00007162483,0.022388324],"study_design_scores_gemma":[0.00013246248,0.0002871845,0.00080781,0.00000587841,0.000019885507,0.0000018114928,0.000018068778,0.033128116,0.91456455,0.00007450051,0.050910722,0.000048984602],"about_ca_topic_score_codex":0.00020758988,"about_ca_topic_score_gemma":0.00048765895,"teacher_disagreement_score":0.8241743,"about_ca_system_score_codex":0.000019586645,"about_ca_system_score_gemma":0.0000030944423,"threshold_uncertainty_score":0.14975485},"labels":[],"label_agreement":null},{"id":"W1981743634","doi":"10.3390/v5030873","title":"RSV Fusion: Time for a New Model","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Nucleolin; Viral entry; Tropism; Lipid bilayer fusion; Fusion protein; Glycoprotein; Receptor; Virus; Biology; Virology; Cell; Cell fusion; Cell biology; Computational biology; Cytoplasm; Viral replication; Recombinant DNA; Molecular biology; Genetics","score_opus":0.32769723429484576,"score_gpt":0.4856128828967102,"score_spread":0.1579156486018644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981743634","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000005195015,0.9918399,0.0006064183,0.000040658215,0.00009752621,0.0031662679,0.000061487226,0.00013633768,0.0040462073],"genre_scores_gemma":[5.994619e-8,0.94227487,0.0017464246,0.0004731455,0.00082477025,0.00072700076,0.00004926668,0.000110722576,0.05379372],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99835366,0.000065357264,0.0005018185,0.00041337946,0.0003050145,0.00036078857],"domain_scores_gemma":[0.9985414,0.00020173007,0.0001406844,0.0006656118,0.00014052098,0.00031002684],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019225632,0.00034602574,0.0013903488,0.00040455605,0.00009815885,0.000069010144,0.00020578803,0.00038114752,0.0020663007],"category_scores_gemma":[0.0003558735,0.00023895586,0.0005336494,0.00034989943,0.0000582658,0.00013475658,0.00011618427,0.00039046333,0.008685707],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011157316,0.00005001752,5.273695e-7,0.005565406,0.000110956644,0.0000040881205,0.000003898403,0.0000019085253,0.000062964784,0.00009048588,0.19543432,0.7986643],"study_design_scores_gemma":[0.00031914975,0.0002592616,1.7249651e-7,0.004042343,0.000482882,0.00003168455,6.454223e-7,0.0003870653,0.000027896007,0.00010135871,0.9941345,0.0002130734],"about_ca_topic_score_codex":0.00006145367,"about_ca_topic_score_gemma":0.0000019375982,"teacher_disagreement_score":0.79870015,"about_ca_system_score_codex":0.00016309382,"about_ca_system_score_gemma":0.0015041408,"threshold_uncertainty_score":0.99884593},"labels":[],"label_agreement":null},{"id":"W1986159102","doi":"10.3390/v3112214","title":"Biology and Genomics of Viruses Within the Genus Gammabaculovirus","year":2011,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ontario Forest Research Institute","funders":"","keywords":"Sawfly; Biology; Genome; Entomology; Hymenoptera; Lepidoptera genitalia; Evolutionary biology; Zoology; Gene; Virology; Genetics; Ecology","score_opus":0.059393859842861836,"score_gpt":0.34469318826029843,"score_spread":0.2852993284174366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986159102","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051128096,0.99310154,0.00003802593,0.0000015398,0.00044479902,0.0004017798,0.00037639833,0.000015022808,0.00050807116],"genre_scores_gemma":[0.0011013193,0.99776775,0.00008705852,0.00034863182,0.00039047847,0.000092836046,0.00006347419,0.00006305931,0.00008541509],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984495,0.0002321261,0.00054487964,0.00048140468,0.00006207774,0.00023003113],"domain_scores_gemma":[0.9986004,0.00005288108,0.0005448965,0.0006537838,0.000055153538,0.00009284582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017179699,0.00039552175,0.00072273845,0.00007852957,0.00012738176,0.000025611293,0.00040486903,0.00043716852,0.00004822909],"category_scores_gemma":[0.00011044425,0.00024382806,0.00033701985,0.00009977564,0.00037377974,0.0000040366494,0.0003860577,0.00017922674,0.000028828477],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015021398,0.00024278078,0.00046322634,0.004794188,0.0014733243,0.000006910408,0.00013657198,0.000004536833,0.017456345,0.0031050206,0.007980093,0.9641868],"study_design_scores_gemma":[0.000121381214,0.00025050956,0.000007652766,0.00039783152,0.0003501433,0.00003580074,0.00001283816,3.3348667e-7,0.004621126,0.00014982444,0.9937563,0.0002962873],"about_ca_topic_score_codex":0.00019128007,"about_ca_topic_score_gemma":0.000037126858,"teacher_disagreement_score":0.9857762,"about_ca_system_score_codex":0.000011336659,"about_ca_system_score_gemma":0.00023430769,"threshold_uncertainty_score":0.994302},"labels":[],"label_agreement":null},{"id":"W1991695349","doi":"10.3390/v5061500","title":"The Role of Chromatin in Adenoviral Vector Function","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research; Government of Ontario","keywords":"Biology; Chromatin; Genetic enhancement; Transgene; Gene; Gene delivery; Viral vector; Vector (molecular biology); Computational biology; Virus; Cloning (programming); Cell biology; Helper virus; Genome; Genetics; Recombinant DNA","score_opus":0.03898409742291026,"score_gpt":0.3406381703988326,"score_spread":0.30165407297592234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991695349","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005364559,0.99370164,0.000001669229,0.0000044805274,0.00009436911,0.0005341954,0.000034812532,0.0000067487517,0.0002575217],"genre_scores_gemma":[0.001336286,0.9978207,0.00001138717,0.000027729018,0.00024145536,0.00022467563,0.00006705384,0.000047907568,0.00022283645],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986283,0.00027896755,0.00038384937,0.00027337455,0.00017698479,0.00025853014],"domain_scores_gemma":[0.99913913,0.000056714158,0.00019010845,0.00052858115,0.000045410372,0.000040052422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027604905,0.00022128283,0.00043844737,0.00008263085,0.000054062428,0.000028801134,0.00040676093,0.00026094491,0.000077066055],"category_scores_gemma":[0.000078090205,0.00014405817,0.00019130594,0.00017662565,0.000107711254,0.0000031244879,0.00012477169,0.00018958209,0.00013504535],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013707158,0.00003816485,0.000012591832,0.00053543696,0.000113101996,4.5873816e-7,0.0000047326976,8.5573276e-7,0.047235746,0.00003592999,0.0005653641,0.9513205],"study_design_scores_gemma":[0.00011483073,0.00086850685,0.000010289039,0.00039099524,0.000036119658,0.0000020198709,0.000011427832,0.000001466033,0.021914491,0.00003388629,0.9764701,0.00014584723],"about_ca_topic_score_codex":0.00008255855,"about_ca_topic_score_gemma":0.0002115726,"teacher_disagreement_score":0.97590476,"about_ca_system_score_codex":0.00002726607,"about_ca_system_score_gemma":0.00025774408,"threshold_uncertainty_score":0.5874522},"labels":[],"label_agreement":null},{"id":"W1993335251","doi":"10.3390/v1030979","title":"Innate and Adaptive Immune Responses to Herpes Simplex Virus","year":2009,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":145,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Innate immune system; Herpes simplex virus; Immune system; Acquired immune system; Biology; Immunology; Intrinsic immunity; Immunity; Virus","score_opus":0.0424293037767262,"score_gpt":0.33513933989841976,"score_spread":0.29271003612169355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993335251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945512,0.00079638365,0.00008157423,0.0006669438,0.000062374536,0.00030787566,0.00003861314,0.0001251082,0.003369971],"genre_scores_gemma":[0.99386877,0.00019897538,0.0009808961,0.0040243166,0.00006951428,0.00001905322,0.0000029448208,0.00001553841,0.00081998436],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999211,0.000044713932,0.00018164172,0.00022604786,0.00012055884,0.00021603919],"domain_scores_gemma":[0.9994457,0.00007569575,0.000034609813,0.00022948903,0.00005179629,0.0001627514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000941377,0.00015408236,0.000237396,0.00017248442,0.00013026132,0.00002821479,0.000036728317,0.00006294356,0.00014914812],"category_scores_gemma":[0.00010741962,0.00012269247,0.000046517358,0.00023642469,0.00004401054,0.00010572153,0.000027249582,0.00007203569,0.0002519819],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019248913,0.00065036525,0.003810514,0.00000841097,0.00018776485,0.00018086814,0.00045005995,0.0000028181548,0.02190172,0.0011996882,0.0013810844,0.96830183],"study_design_scores_gemma":[0.0015967853,0.001708897,0.30700737,0.000091543436,0.00010982176,0.00006105799,0.00009510256,0.000014193882,0.0941876,0.0005322238,0.5943757,0.00021969783],"about_ca_topic_score_codex":0.00048904546,"about_ca_topic_score_gemma":0.000042470685,"teacher_disagreement_score":0.96808213,"about_ca_system_score_codex":0.00004743735,"about_ca_system_score_gemma":0.000046353234,"threshold_uncertainty_score":0.5003253},"labels":[],"label_agreement":null},{"id":"W1997653283","doi":"10.3390/v2081766","title":"Antiviral Strategies for Pandemic and Seasonal Influenza","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nexen (Canada)","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Pandemic; Virology; Seasonal influenza; Drug; Public health; Medicine; Antiviral drug; Influenza A virus; Coronavirus disease 2019 (COVID-19); Virus; Intensive care medicine; Biology; Pharmacology; Infectious disease (medical specialty); Disease","score_opus":0.13630041935564322,"score_gpt":0.43117822146243456,"score_spread":0.2948778021067914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997653283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960025,0.00094206975,0.00004292739,0.00012551097,0.0001031794,0.00038914292,0.00006267536,0.00010391451,0.0022280961],"genre_scores_gemma":[0.99525785,0.0001293525,0.0013809265,0.0026874535,0.00030885858,0.00007688816,0.0000031194272,0.000021701138,0.00013386416],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99911124,0.000014216501,0.00014691913,0.00021019265,0.00020504542,0.0003123741],"domain_scores_gemma":[0.99937576,0.00021411825,0.00003421717,0.00016627734,0.00011531152,0.00009432783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021942695,0.00013377689,0.00022032237,0.000083300445,0.00014912471,0.00006236561,0.00006335375,0.00008681218,0.000047574427],"category_scores_gemma":[0.00043055307,0.0001026581,0.000049389557,0.00008028086,0.00031139876,0.0002533132,0.000070158116,0.00027329253,0.00003245288],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067419006,0.000069062065,0.56329834,0.00019552387,0.00013751653,0.000010076373,0.00038263897,5.473332e-7,0.40816385,0.009647365,0.0032382535,0.014182662],"study_design_scores_gemma":[0.0045939516,0.0006751338,0.42431757,0.00008841311,0.00011599099,0.000043830052,0.0008450449,0.00019754018,0.024994405,0.00429121,0.53946054,0.00037635575],"about_ca_topic_score_codex":0.000055222437,"about_ca_topic_score_gemma":0.00009069606,"teacher_disagreement_score":0.53622234,"about_ca_system_score_codex":0.000011896224,"about_ca_system_score_gemma":0.0001627054,"threshold_uncertainty_score":0.4186276},"labels":[],"label_agreement":null},{"id":"W1997659215","doi":"10.3390/v4060940","title":"Analysis of Sequence Polymorphism and Population Structure of Tomato chlorotic dwarf viroid and Potato spindle tuber viroid in Viroid-Infected Tomato Plants","year":2012,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Potato spindle tuber viroid; Viroid; Biology; Genetics; Population; Nucleic acid sequence; Virology; Plant virus; Gene; Virus","score_opus":0.0380543860406777,"score_gpt":0.2808608000536735,"score_spread":0.24280641401299577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997659215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99722797,0.0013336471,3.723075e-7,0.000043677635,0.000026618778,0.00020382155,0.0011201829,0.000026418325,0.000017319107],"genre_scores_gemma":[0.9994055,0.00035378526,0.00003196667,0.00007120806,0.000031744446,0.000005483325,0.0000925862,0.00000174334,0.0000059691547],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986192,0.00011399517,0.0003508037,0.0002576214,0.00030982017,0.00034854858],"domain_scores_gemma":[0.9993385,0.00026349595,0.00016279507,0.000080015314,0.000032779535,0.00012240768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016729276,0.0001864725,0.00047799072,0.00014796841,0.00009452674,0.00002654266,0.00013114084,0.0001066766,0.00010203701],"category_scores_gemma":[0.000110981666,0.000085881635,0.00005461182,0.00075882423,0.00014754692,0.00041872892,0.00012269037,0.00010230162,0.00000260541],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037992166,0.00004118051,0.35426342,0.000014937186,0.00008217115,0.0000018131933,0.00016588051,0.000008958044,0.6443008,0.000025795087,0.000008730543,0.0010482795],"study_design_scores_gemma":[0.00012899628,0.00007436211,0.85176015,0.00003357597,0.00006588401,0.000009111233,0.00014398343,0.00017636274,0.1473941,0.000051370593,0.000022914137,0.0001391736],"about_ca_topic_score_codex":0.0065802764,"about_ca_topic_score_gemma":0.0053771655,"teacher_disagreement_score":0.49749675,"about_ca_system_score_codex":0.000025164614,"about_ca_system_score_gemma":0.0000053823755,"threshold_uncertainty_score":0.9947454},"labels":[],"label_agreement":null},{"id":"W1998676146","doi":"10.3390/v6114227","title":"Resistance Patterns Associated with HCV NS5A Inhibitors Provide Limited Insight into Drug Binding","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"NS5A; Hepatitis C virus; Virology; Protease inhibitor (pharmacology); Drug resistance; Drug; Potency; Medicine; Biology; Pharmacology; Hepacivirus; Virus; In vitro; Viral load; Microbiology; Genetics","score_opus":0.07166580756219074,"score_gpt":0.36192864616928466,"score_spread":0.2902628386070939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998676146","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002077735,0.9899665,0.000017348875,0.00013461224,0.00027370732,0.0026260975,0.00023500732,0.0003956238,0.00427338],"genre_scores_gemma":[0.0009416005,0.9921468,0.00014962771,0.00042586366,0.00056142657,0.00046741575,0.00057166186,0.00034240214,0.004393203],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9946806,0.0008618773,0.0011678538,0.0010125088,0.0014067724,0.0008704207],"domain_scores_gemma":[0.99630433,0.0010730915,0.0007586987,0.0010608278,0.00032949238,0.00047353507],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008726023,0.0008401243,0.0029495584,0.0010655659,0.00024399154,0.00017048945,0.00048437124,0.0005843355,0.00017054135],"category_scores_gemma":[0.0026049877,0.00059633877,0.00040399889,0.0015005714,0.00021317317,0.00024357763,0.00023189909,0.0015056804,0.0006602131],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014689505,0.00036989653,0.01057866,0.050457433,0.0014544799,0.0008848218,0.0008016428,1.66832e-7,0.000031997795,0.000046906353,0.021783866,0.9134432],"study_design_scores_gemma":[0.0006645779,0.00017158249,0.00006461455,0.10008943,0.00072772574,0.000005489232,0.00001414059,0.00000191026,0.00011289297,0.000003197604,0.89756596,0.000578454],"about_ca_topic_score_codex":0.00058709166,"about_ca_topic_score_gemma":0.0043041776,"teacher_disagreement_score":0.9128648,"about_ca_system_score_codex":0.0011023702,"about_ca_system_score_gemma":0.0012640654,"threshold_uncertainty_score":0.9996488},"labels":[],"label_agreement":null},{"id":"W2002833274","doi":"10.3390/v3081415","title":"Correction: Okomo-Adhiambo, M. et al. Neuraminidase Inhibitor Susceptibility Testing in Human Influenza Viruses: A Laboratory Surveillance Perspective. Viruses 2010, 2, 2269-2289","year":2011,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Neuraminidase; Virology; Table (database); Neuraminidase inhibitor; Perspective (graphical); Biology; Coronavirus disease 2019 (COVID-19); Medicine; Computer science; Virus; Database; Internal medicine; Artificial intelligence; Disease; Infectious disease (medical specialty)","score_opus":0.18957165149290187,"score_gpt":0.407145183617567,"score_spread":0.21757353212466515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002833274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9864021,0.0024040292,0.000011518668,0.00024391586,0.0012736431,0.0013989458,0.000219555,0.0007118467,0.007334468],"genre_scores_gemma":[0.95973986,0.00020857416,0.00080558116,0.03801827,0.00046146123,0.00032024123,0.000007793888,0.00019568494,0.00024255157],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99427336,0.000832248,0.0012321036,0.0013893461,0.0010649859,0.001207957],"domain_scores_gemma":[0.9951308,0.0011968273,0.0004165626,0.001315419,0.0014953205,0.00044507155],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020992474,0.0007751681,0.0011364756,0.00078891346,0.0005312435,0.00013399693,0.0004406407,0.0002815886,0.00064518093],"category_scores_gemma":[0.010197628,0.00072260736,0.00019855468,0.0019697235,0.0010070308,0.0010091241,0.00048523056,0.0015216563,0.0005484559],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011249904,0.001232697,0.82189023,0.00014864841,0.00016728308,0.00027869703,0.0031267407,0.000015995529,0.13261585,0.00016367288,0.03893932,0.00029585863],"study_design_scores_gemma":[0.0044636996,0.0016802502,0.85122484,0.0006300843,0.000069575304,0.000043770793,0.0040154285,0.0000898253,0.07890623,0.00016620751,0.057640675,0.0010694278],"about_ca_topic_score_codex":0.012574066,"about_ca_topic_score_gemma":0.005781366,"teacher_disagreement_score":0.05370962,"about_ca_system_score_codex":0.00081081316,"about_ca_system_score_gemma":0.0006886417,"threshold_uncertainty_score":0.9995225},"labels":[],"label_agreement":null},{"id":"W2007671505","doi":"10.3390/v5020619","title":"Phage Lambda P Protein: Trans-Activation, Inhibition Phenotypes and their Suppression","year":2013,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"dnaB helicase; Biology; Repressor lexA; DNA replication; DnaA; Plasmid; Origin of replication; Molecular biology; ColE1; Pre-replication complex; DNA; Cell biology; Genetics; Repressor; Helicase; Gene; Gene expression; RNA","score_opus":0.012636637854671022,"score_gpt":0.2194358139820306,"score_spread":0.20679917612735957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007671505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966132,0.000018426013,0.00045927597,0.00040931202,0.000046316592,0.00027938484,0.000011268541,0.000043585274,0.0021192075],"genre_scores_gemma":[0.9985712,0.000013734784,0.0003094448,0.00051496277,0.000034690147,0.00005040331,0.0000070359756,0.000009714815,0.0004887759],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99957377,0.000023823046,0.00009632492,0.0001513496,0.00004314465,0.00011159423],"domain_scores_gemma":[0.9998102,0.000015603458,0.000035562844,0.00009013334,0.000005927085,0.00004257614],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000027032993,0.00008684,0.00006336023,0.000016100565,0.00012531159,0.00006105016,0.00003901884,0.00003800961,0.0077413134],"category_scores_gemma":[0.0000074244936,0.00006387445,0.000019138586,0.000059816866,0.00007015061,0.0007962774,0.00003826695,0.000064294836,0.00039425318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000063959496,0.000037674134,0.00016838832,0.0000051687466,0.0000028213774,2.062781e-7,0.00030219252,0.0000022943623,0.9858969,0.000015223039,0.0021696093,0.011393134],"study_design_scores_gemma":[0.00013653697,0.000034000073,0.034735776,0.000033447104,0.0000023636076,0.0000030540466,0.000093677976,0.000026393367,0.9254757,0.00030272966,0.039060682,0.00009561943],"about_ca_topic_score_codex":0.0011583697,"about_ca_topic_score_gemma":0.00005279594,"teacher_disagreement_score":0.060421173,"about_ca_system_score_codex":0.000022669677,"about_ca_system_score_gemma":0.0000021965548,"threshold_uncertainty_score":0.99316573},"labels":[],"label_agreement":null},{"id":"W2007884631","doi":"10.3390/v5020423","title":"Is there a Role for Cyclophilin Inhibitors in the Management of Primary Biliary Cirrhosis?","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton","funders":"","keywords":"Primary biliary cirrhosis; Immunosuppression; Tacrolimus; Autoimmune hepatitis; Liver transplantation; Immunology; Medicine; Transplantation; Cirrhosis; Ursodeoxycholic acid; Viral hepatitis; Liver disease; Hepatitis; Internal medicine","score_opus":0.07994993318477601,"score_gpt":0.3414725593914749,"score_spread":0.2615226262066989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007884631","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015229232,0.9924041,0.0000011054849,0.00006675472,0.00008851875,0.0031811176,0.00017443924,0.000015953967,0.002545078],"genre_scores_gemma":[0.0001280841,0.99787855,0.0001517023,0.00070741586,0.0001251227,0.0006753394,0.000084081206,0.0000393266,0.00021039663],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99875927,0.00011019378,0.0004917738,0.00023329776,0.00021798682,0.00018747889],"domain_scores_gemma":[0.9988634,0.00016840606,0.0002209018,0.00066458236,0.000037551257,0.0000451627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023475182,0.0002577077,0.0009542642,0.0001313412,0.000037377424,0.000015845475,0.00030969054,0.00013704842,0.00014445125],"category_scores_gemma":[0.000011067653,0.00014178456,0.000515803,0.00025012408,0.000059809114,0.0000678629,0.00012659378,0.00020146555,0.000054315817],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003010004,0.00048271974,0.0002762368,0.06338335,0.0005384108,0.0000086038035,0.00016090594,3.9480053e-8,0.000002631112,0.00009026666,0.0054307855,0.92959595],"study_design_scores_gemma":[0.0004212477,0.00012870338,0.0018913228,0.017475393,0.00199428,0.0000035538849,0.00030520617,4.5091394e-7,0.000008895994,0.00018330966,0.9774402,0.00014743087],"about_ca_topic_score_codex":0.00020222244,"about_ca_topic_score_gemma":0.0000011163947,"teacher_disagreement_score":0.9720094,"about_ca_system_score_codex":0.0000719269,"about_ca_system_score_gemma":0.00012765675,"threshold_uncertainty_score":0.5781807},"labels":[],"label_agreement":null},{"id":"W2008584102","doi":"10.3390/v2071458","title":"The Genomic Diversity and Phylogenetic Relationship in the Family Iridoviridae","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Iridovirus; Ranavirus; Biology; Genome; ORFS; Phylogenetic tree; Evolutionary biology; Genetics; Virus classification; Gene; Open reading frame","score_opus":0.025389903272646116,"score_gpt":0.23626442811056272,"score_spread":0.2108745248379166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008584102","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943175,0.0036738438,0.000003457597,0.00034981157,0.00024956514,0.00018004695,0.00001233651,0.000016048334,0.001197423],"genre_scores_gemma":[0.99831146,0.0001313609,0.0000060448947,0.0010442279,0.000022532837,0.000007003167,0.000009736033,0.0000039097795,0.00046374215],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995063,0.00010716241,0.000087984736,0.00012987414,0.000016083743,0.0001525782],"domain_scores_gemma":[0.99953806,0.00020918701,0.000034447778,0.00020160305,0.000009636989,0.0000070865267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023374759,0.000079672354,0.000060137052,0.000030385028,0.0010667283,0.000026039113,0.0002762091,0.0000760154,0.000028908551],"category_scores_gemma":[0.000048307866,0.000043674663,0.000026748996,0.00007000593,0.0002661572,0.000037902788,0.00031683987,0.0002398247,0.00022923583],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005049164,0.000039235834,0.34359288,0.0000039787337,0.000039394938,0.0000028159127,0.0014403175,6.8299596e-7,0.63172835,0.008021961,0.013549114,0.0015307846],"study_design_scores_gemma":[0.00029423853,0.000011824332,0.8326988,0.0000016981825,0.00002849989,0.0000036769884,0.0005766158,3.0091815e-7,0.0006393399,0.00039471636,0.16528796,0.00006228961],"about_ca_topic_score_codex":0.0001478495,"about_ca_topic_score_gemma":0.00040087407,"teacher_disagreement_score":0.63108903,"about_ca_system_score_codex":0.0000048971065,"about_ca_system_score_gemma":0.000008363266,"threshold_uncertainty_score":0.8204519},"labels":[],"label_agreement":null},{"id":"W2010552390","doi":"10.3390/v2102356","title":"Poxvirus Exploitation of the Ubiquitin-Proteasome System","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cullin; Ubiquitin; Proteasome; Biology; Cell biology; Ubiquitin-Protein Ligases; SUMO protein; Ubiquitin ligase; Computational biology; Deubiquitinating enzyme; Genetics; Gene","score_opus":0.017586150272815793,"score_gpt":0.25140696008436797,"score_spread":0.23382080981155218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010552390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994765,0.00016255777,0.00009513614,0.000046597197,0.00045993263,0.00026378216,0.00004863774,0.000022611996,0.0041357735],"genre_scores_gemma":[0.9987951,0.000009897992,0.00038612998,0.00025269188,0.00027628077,0.000053264,0.0000072638054,0.000017991548,0.00020141757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993086,0.00006265196,0.00017383453,0.00017731344,0.00013437471,0.0001432197],"domain_scores_gemma":[0.9993289,0.000013475674,0.00011963188,0.00042391176,0.000072216906,0.000041862513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018461347,0.000102239836,0.000095742114,0.000023244793,0.000083398314,0.000014343327,0.000255739,0.00011571176,0.000038338017],"category_scores_gemma":[0.00013301574,0.00007337887,0.000082599676,0.00007730083,0.000092618095,0.000004645098,0.00010187758,0.00010958057,0.000028860866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025628555,0.000020374764,0.0018250633,0.00004036825,0.000013053484,3.947468e-7,0.000045020537,0.0000022965041,0.99321485,0.0035975159,0.0003150853,0.00090034254],"study_design_scores_gemma":[0.00018373228,0.000066372246,0.0020592595,0.000022948045,0.00000911598,0.000010657583,0.0001259221,0.0000072500734,0.9714817,0.00008307227,0.025856987,0.000093000504],"about_ca_topic_score_codex":0.00004311048,"about_ca_topic_score_gemma":0.000038736656,"teacher_disagreement_score":0.0255419,"about_ca_system_score_codex":0.000004376001,"about_ca_system_score_gemma":0.00005613672,"threshold_uncertainty_score":0.29923034},"labels":[],"label_agreement":null},{"id":"W2012301191","doi":"10.3390/v3050456","title":"Making Sense out of Antisense Transcription in Human T-Cell Lymphotropic Viruses (HTLVs)","year":2011,"lang":"en","type":"review","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"CREB; Transcription (linguistics); Long terminal repeat; Retrovirus; Biology; Transcription factor; Leucine zipper; Sense (electronics); Molecular biology; Murine leukemia virus; Activating transcription factor; Antisense RNA; Cell biology; Virology; Gene; Messenger RNA; Gene expression; Virus; Genetics; Chemistry","score_opus":0.1464824351432776,"score_gpt":0.34557380976240737,"score_spread":0.19909137461912976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012301191","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0068057636,0.98750967,0.000007041461,0.0000013434433,0.0015725519,0.00058016984,0.0002514518,0.00009780313,0.0031741883],"genre_scores_gemma":[0.016427983,0.9819213,0.000024465542,0.00009283519,0.00007916182,0.000049387363,0.0000574831,0.00008605737,0.0012613381],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969284,0.00058665295,0.0012062917,0.0006311866,0.000058424786,0.0005890267],"domain_scores_gemma":[0.99854225,0.00016153937,0.00068595784,0.0005337168,0.00005421425,0.000022351776],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021151044,0.00069013005,0.0024069806,0.0006045142,0.00020045767,0.000014294793,0.00032442572,0.0008820184,0.00036957432],"category_scores_gemma":[0.00003261855,0.0005382015,0.0006244007,0.00024991416,0.0004831815,0.00010042256,0.00013954744,0.0005531591,0.00074748986],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002621541,0.0018464675,0.00097477314,0.03158813,0.0020409601,0.0002465211,0.004103556,8.0751414e-7,0.5548977,0.0020194706,0.003980607,0.39803886],"study_design_scores_gemma":[0.00083214854,0.00018260528,0.000043026943,0.0054828357,0.00078893534,0.00004397238,0.000105724284,1.9749926e-8,0.013080969,0.000037528956,0.9788453,0.000556928],"about_ca_topic_score_codex":0.0006783488,"about_ca_topic_score_gemma":0.000395675,"teacher_disagreement_score":0.9748647,"about_ca_system_score_codex":0.00009753438,"about_ca_system_score_gemma":0.00012742086,"threshold_uncertainty_score":0.9997069},"labels":[],"label_agreement":null},{"id":"W2015466683","doi":"10.3390/v4112754","title":"Use of an Innovative Web-Based Laboratory Surveillance Platform to Analyze Mixed Infections Between Human Metapneumovirus (hMPV) and Other Respiratory Viruses Circulating in Alberta (AB), Canada (2009–2012)","year":2012,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Calgary; University of Alberta; Provincial Laboratory of Public Health","funders":"","keywords":"Human metapneumovirus; Rhinovirus; Metapneumovirus; Virology; Enterovirus; Respiratory system; Medicine; Virus; Respiratory tract infections; Internal medicine","score_opus":0.12271634749388775,"score_gpt":0.3776068088325083,"score_spread":0.25489046133862053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015466683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99819094,0.00024557606,0.000020816207,0.000028448567,0.00011522122,0.0006644327,0.00040158842,0.000059610826,0.00027333866],"genre_scores_gemma":[0.9949926,0.000002059755,0.00015018077,0.004472448,0.00018630328,0.000088022476,0.000013437749,0.000076519806,0.000018401852],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969587,0.0004568749,0.0008772207,0.00045180056,0.0005833422,0.000672105],"domain_scores_gemma":[0.9971565,0.000894354,0.00027792988,0.0006911579,0.00050867605,0.00047136605],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001202338,0.00034887876,0.00070944993,0.0011666719,0.00023777633,0.00006199444,0.00014943305,0.00018124182,0.00013611252],"category_scores_gemma":[0.0016984704,0.0003319916,0.000051345934,0.0031265263,0.0002269623,0.0012110511,0.00009628732,0.00047499908,0.000012765007],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006547312,0.0002227581,0.8688764,0.00006368906,0.00011733126,0.000008598145,0.00011743983,0.00012855613,0.12932436,0.00011978775,0.00039156608,0.0005640389],"study_design_scores_gemma":[0.00096648524,0.00045503973,0.80999404,0.00008347667,0.00003853769,0.0000026568196,0.000071526505,0.000038162532,0.063217536,0.000003303893,0.12479161,0.00033761328],"about_ca_topic_score_codex":0.48704788,"about_ca_topic_score_gemma":0.79594034,"teacher_disagreement_score":0.30889246,"about_ca_system_score_codex":0.00043173012,"about_ca_system_score_gemma":0.0012880806,"threshold_uncertainty_score":0.9999132},"labels":[],"label_agreement":null},{"id":"W2017714227","doi":"10.3390/v6125145","title":"Cetacean Morbillivirus: Current Knowledge and Future Directions","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":244,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; University of Calgary","funders":"Fogarty International Center; Natural Environment Research Council; Science and Technology Directorate; National Institutes of Health; Swan River Trust; U.S. Department of Homeland Security","keywords":"Biology; Morbillivirus; Virology; Virus; Encephalitis; Cetacea; Zoology; Paramyxoviridae; Viral disease","score_opus":0.07775680226397816,"score_gpt":0.40886726261274325,"score_spread":0.3311104603487651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017714227","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000042060336,0.9961634,0.0000025354368,0.000045915152,0.0011892212,0.0005142959,0.00013158466,0.00015767326,0.0017532929],"genre_scores_gemma":[0.000009903319,0.9960989,0.000016058257,0.00022165361,0.0030340825,0.000103588165,0.000093210474,0.000055949076,0.00036667337],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99864876,0.00019863746,0.0003614905,0.0004464021,0.000096168005,0.0002485118],"domain_scores_gemma":[0.9990403,0.00013922136,0.00014501496,0.00040134537,0.000036956113,0.00023713363],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000112615686,0.0004062008,0.0014603905,0.00023002917,0.00015376195,0.00001948211,0.00009900699,0.00032514616,0.00024279348],"category_scores_gemma":[0.00007969655,0.00027711818,0.0003835455,0.0002136628,0.00015526827,0.000061868,0.0000807122,0.00051186903,0.000723306],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001156956,0.00018377289,0.00013025319,0.012948298,0.00016509158,0.000006459141,0.000023983594,2.4259612e-9,2.3045382e-7,0.00030661197,0.01066751,0.9755562],"study_design_scores_gemma":[0.00021483845,0.00009856723,0.0003369848,0.0052378825,0.002996371,0.000060969167,0.0000045301526,7.2306835e-7,4.8116453e-7,0.000025311856,0.99076754,0.00025579808],"about_ca_topic_score_codex":0.0000048536076,"about_ca_topic_score_gemma":0.000010337225,"teacher_disagreement_score":0.98010004,"about_ca_system_score_codex":0.000035777117,"about_ca_system_score_gemma":0.00017640454,"threshold_uncertainty_score":0.9999681},"labels":[],"label_agreement":null},{"id":"W2022931853","doi":"10.3390/v1010026","title":"The Complete Sequence of a Human Parainfluenzavirus 4 Genome","year":2009,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University of Calgary; Provincial Laboratory of Public Health; Hospital for Sick Children","funders":"Hospital for Sick Children","keywords":"Genome; Biology; Human genome; Subfamily; Genetics; Whole genome sequencing; Sequence (biology); Complete sequence; Gene; Computational biology","score_opus":0.12339662968560325,"score_gpt":0.3822719462378185,"score_spread":0.2588753165522153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022931853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994756,0.0017922015,0.0000050537215,0.00053039874,0.000022729548,0.00014882472,0.000041813044,0.00004516256,0.0026578228],"genre_scores_gemma":[0.9924603,0.000075480195,0.00003271439,0.007242391,0.000059154063,0.000004950462,0.000007218921,0.0000051994457,0.00011259629],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993904,0.000037973692,0.00018134656,0.00011393294,0.000111265894,0.00016506361],"domain_scores_gemma":[0.9995199,0.000053599204,0.00006358928,0.00026824253,0.000029350198,0.00006534544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000089767454,0.00008194192,0.0001616346,0.00003065478,0.00017249044,0.00000685428,0.00011362603,0.000041427356,0.00007293249],"category_scores_gemma":[0.00006670063,0.000051849416,0.00006642745,0.00008044387,0.00023887397,0.00003930336,0.000014991966,0.00008739981,0.00007691386],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026745445,0.00010705377,0.01011216,0.000012696741,0.00004000416,0.00003130526,0.00009007338,0.0000030971478,0.97453564,0.012469145,0.00037227743,0.0019590715],"study_design_scores_gemma":[0.00090124767,0.0012840377,0.9224702,0.000038715214,0.000114113784,0.000021741733,0.000052199204,0.000012818738,0.010235312,0.0053937356,0.059351776,0.0001240874],"about_ca_topic_score_codex":0.000031356965,"about_ca_topic_score_gemma":0.0000064520063,"teacher_disagreement_score":0.96430033,"about_ca_system_score_codex":0.000010458282,"about_ca_system_score_gemma":0.00003133001,"threshold_uncertainty_score":0.21143578},"labels":[],"label_agreement":null},{"id":"W2023247652","doi":"10.3390/v6103875","title":"The Structure of Human Prions: From Biology to Structural Models—Considerations and Pitfalls","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Prion Research Institute","keywords":"Prion protein; Biology; Computational biology; Download; Protein folding; Virology; Disease; Genetics; Cell biology; Medicine; Computer science; World Wide Web","score_opus":0.04796889319407246,"score_gpt":0.3608881258054606,"score_spread":0.31291923261138815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023247652","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008715109,0.9897894,0.000095700096,0.000018621135,0.00010220135,0.000412099,0.0008460329,0.0000072017915,0.00001363579],"genre_scores_gemma":[0.020815913,0.97794145,0.00045909602,0.00020728132,0.0002660995,0.000018689232,0.00025557858,0.000026426387,0.00000943657],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988979,0.00016983999,0.00035964404,0.0003502818,0.000059303293,0.00016304519],"domain_scores_gemma":[0.9990917,0.0001053484,0.00020659337,0.0004640006,0.00004795688,0.000084389845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006105383,0.0002369979,0.000497737,0.000041529172,0.00023982047,0.000052288437,0.0002197241,0.00025247133,0.000032731627],"category_scores_gemma":[0.0001492352,0.00015212469,0.00014813282,0.0000435558,0.00010758396,0.0000033463107,0.0002346001,0.00010690603,0.00000173721],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001857838,0.000010668438,0.000047867925,0.0010036482,0.00055510533,8.895068e-7,0.000047485537,0.000026122474,0.056665793,0.015823299,0.0014182109,0.9243823],"study_design_scores_gemma":[0.000109826426,0.00011658695,0.000013865907,0.00053982204,0.00021726177,0.000005278375,0.000007825225,0.000005394029,0.0020439797,0.016772177,0.979879,0.00028893477],"about_ca_topic_score_codex":0.000118311,"about_ca_topic_score_gemma":0.0001828729,"teacher_disagreement_score":0.97846085,"about_ca_system_score_codex":0.0000069281036,"about_ca_system_score_gemma":0.00010107615,"threshold_uncertainty_score":0.6203465},"labels":[],"label_agreement":null},{"id":"W2024844766","doi":"10.3390/v5071758","title":"Chromatin Dynamics during Lytic Infection with Herpes Simplex Virus 1","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Chromatin; Biology; Histone-modifying enzymes; Chromatin immunoprecipitation; ChIA-PET; ChIP-on-chip; Cell biology; Lytic cycle; Chromatin remodeling; Transcription (linguistics); Micrococcal nuclease; ChIP-sequencing; Scaffold/matrix attachment region; Histone; Genetics; Gene; Gene expression; Virus; Nucleosome; Promoter","score_opus":0.06259703815823071,"score_gpt":0.35830918061091255,"score_spread":0.29571214245268185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024844766","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020669283,0.97313744,0.00006878537,0.0000064130163,0.00021296543,0.002015251,0.00015587137,0.0004552271,0.0032787686],"genre_scores_gemma":[0.0007369487,0.9963159,0.00027582492,0.000042423035,0.00030104676,0.00054954906,0.00025867493,0.00016617823,0.0013534441],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99824595,0.00009807334,0.0005570969,0.00046531358,0.00025135072,0.00038220608],"domain_scores_gemma":[0.99880064,0.00008908448,0.0003432889,0.00054319645,0.00007344464,0.00015037172],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006946598,0.0006027589,0.0014856622,0.0003760396,0.00020779166,0.00009000542,0.00007160402,0.00035196784,0.00052670354],"category_scores_gemma":[0.000030431753,0.00039705262,0.00032830882,0.00049511297,0.000087817156,0.00018368718,0.000053061405,0.00029374697,0.0014376884],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010118084,0.0003954725,0.00035832328,0.009842629,0.00079594005,0.000073929536,0.000006603648,0.0000021314793,0.0000018476298,0.000051369,0.00026101223,0.9882006],"study_design_scores_gemma":[0.0006585405,0.0001889275,0.00045060297,0.0084565785,0.0022695146,0.0003317315,0.0000026586551,0.000025262916,0.0000558023,0.000008914874,0.98716617,0.00038531015],"about_ca_topic_score_codex":0.0041858936,"about_ca_topic_score_gemma":0.0007910852,"teacher_disagreement_score":0.9878153,"about_ca_system_score_codex":0.00073026615,"about_ca_system_score_gemma":0.00024961279,"threshold_uncertainty_score":0.9998481},"labels":[],"label_agreement":null},{"id":"W2025259834","doi":"10.3390/v2040900","title":"HIV-1 Ribonuclease H: Structure, Catalytic Mechanism and Inhibitors","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"RNase H; Reverse transcriptase; Ribonuclease; Human immunodeficiency virus (HIV); Virology; Mechanism (biology); RNase P; Drug; Enzyme; Biology; Medicine; Chemistry; Pharmacology; RNA; Biochemistry; Gene","score_opus":0.010869021662373702,"score_gpt":0.2475730728648344,"score_spread":0.2367040512024607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025259834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997567,0.0000780464,0.000006781902,0.00083891617,0.0002467653,0.00019570794,0.00003752425,0.000081354854,0.00094788935],"genre_scores_gemma":[0.9948364,0.000018040053,0.0016818597,0.0005490834,0.00015246787,0.0000066981306,0.000035796846,0.000022500144,0.002697171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993497,0.0000066556468,0.00013064439,0.00020261551,0.00014519025,0.00016519483],"domain_scores_gemma":[0.99955297,0.000026159556,0.000033058743,0.00018935083,0.000024969839,0.00017348077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000041694697,0.00014003635,0.00016639655,0.00009693442,0.00007433027,0.00002283518,0.00003645645,0.000073693,0.0002963138],"category_scores_gemma":[0.000049548424,0.00010460029,0.000028944429,0.00008299921,0.00005805025,0.000080061705,0.00004066741,0.0001493717,0.00021353141],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003291573,0.00062155584,0.29305476,0.00023732742,0.00058588595,0.0008137948,0.0027920105,3.2464192e-7,0.60056937,0.03343209,0.046772297,0.02079142],"study_design_scores_gemma":[0.0045641833,0.00015279671,0.036170382,0.0001150273,0.0004652485,0.00027148778,0.00025170768,0.00006436336,0.78682315,0.006563941,0.16398722,0.0005705125],"about_ca_topic_score_codex":0.000027456272,"about_ca_topic_score_gemma":0.00004758814,"teacher_disagreement_score":0.2568844,"about_ca_system_score_codex":0.000016787633,"about_ca_system_score_gemma":0.000056742832,"threshold_uncertainty_score":0.4265476},"labels":[],"label_agreement":null},{"id":"W2025496342","doi":"10.3390/v5010054","title":"Utility of the Bacteriophage RB69 Polymerase gp43 as a Surrogate Enzyme for Herpesvirus Orthologs","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Québec Consortium for Drug Discovery","keywords":"Bacteriophage; Polymerase; Biology; Virology; Enzyme; Genetics; DNA; Gene; Biochemistry; Escherichia coli","score_opus":0.1306454363199867,"score_gpt":0.41020554567345535,"score_spread":0.27956010935346864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025496342","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004840263,0.98610514,0.0000061165915,0.00009498201,0.00042926104,0.0050094193,0.0013281819,0.0000905108,0.0020961394],"genre_scores_gemma":[0.0011892054,0.99090385,0.000112219386,0.0006945747,0.00040662996,0.0007373476,0.00009095088,0.00018127404,0.00568394],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957899,0.00042925266,0.0013566187,0.0008495024,0.00071342295,0.00086134276],"domain_scores_gemma":[0.99606836,0.0007773516,0.0007051454,0.0017882122,0.0002903345,0.00037058687],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007187863,0.0007813931,0.0031187295,0.0003540958,0.00023592297,0.00008781194,0.00079289003,0.000715204,0.0044173114],"category_scores_gemma":[0.00069882086,0.00046287238,0.0018025624,0.00074496184,0.00056514784,0.00016902902,0.0004434812,0.00093808747,0.00086636184],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026429907,0.00041590503,0.0001635868,0.020374216,0.0006085596,0.000045376724,0.00007007722,1.8283828e-8,0.00046359276,0.00022550882,0.0062001096,0.97116876],"study_design_scores_gemma":[0.00091393205,0.00023743202,0.0001887462,0.004800996,0.0010955794,0.000102060985,0.000017450011,0.0000038425824,0.0027425587,0.00003635861,0.98948073,0.00038028252],"about_ca_topic_score_codex":0.0018120996,"about_ca_topic_score_gemma":0.00016122512,"teacher_disagreement_score":0.98328066,"about_ca_system_score_codex":0.00009748807,"about_ca_system_score_gemma":0.0017444893,"threshold_uncertainty_score":0.9999116},"labels":[],"label_agreement":null},{"id":"W2025874007","doi":"10.3390/v6114195","title":"Cytoplasmic Dynein Promotes HIV-1 Uncoating","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"National Institute of Allergy and Infectious Diseases; Pfizer; Johns Hopkins University; Canadian Institutes of Health Research; Université Laval; National Institutes of Health","keywords":"Dynein; Cell biology; Microtubule; Cytoplasm; Dynactin; Nuclear transport; Capsid; Dynein ATPase; Chemistry; Biology; Biophysics; Cell nucleus; Virology; Virus","score_opus":0.02264341774652474,"score_gpt":0.270877065103747,"score_spread":0.24823364735722225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025874007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901753,0.00072158297,0.00023659588,0.00025109827,0.00015901943,0.00014862607,0.00006807458,0.00012415525,0.008115542],"genre_scores_gemma":[0.99674916,0.000019566154,0.00016238834,0.0001984531,0.000031925927,0.000025655569,0.000087672925,0.000010555975,0.002714596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992651,0.00013216562,0.00011178017,0.00017212972,0.000025468395,0.00029339487],"domain_scores_gemma":[0.9995724,0.0001749647,0.000031887343,0.0001757551,0.000021748714,0.000023255334],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013256217,0.00009807384,0.00012798606,0.000055141907,0.00015725035,0.000015655645,0.000110755,0.00007329163,0.0008525658],"category_scores_gemma":[0.0001607021,0.00007375087,0.000037477057,0.000061004313,0.00009280841,0.000059595106,0.000049646773,0.00011991614,0.018271346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084504274,0.00023475205,0.058920823,0.00002277894,0.00016944486,0.000010844062,0.00026561136,0.0000039090446,0.8816808,0.002121696,0.017955733,0.03852913],"study_design_scores_gemma":[0.0013080979,0.00036956786,0.0066655623,0.00003160956,0.000018269711,0.000027422288,0.00006606569,0.000009026569,0.6250856,0.00030202355,0.36595687,0.00015985317],"about_ca_topic_score_codex":0.00010999816,"about_ca_topic_score_gemma":0.00004262846,"teacher_disagreement_score":0.34800115,"about_ca_system_score_codex":0.000019275936,"about_ca_system_score_gemma":0.00002845206,"threshold_uncertainty_score":0.98249304},"labels":[],"label_agreement":null},{"id":"W2029504777","doi":"10.3390/v1020222","title":"HCV Animal Models: A Journey of More than 30 Years","year":2009,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Petro-Canada","funders":"Vlaamse regering; Universiteit Gent; Fonds Wetenschappelijk Onderzoek; European Commission","keywords":"Virology; Tropism; Hepatitis C virus; Virus; Animal model; Tissue tropism; Biology; Immunology; Medicine; Internal medicine","score_opus":0.12317447516055194,"score_gpt":0.3885998115053346,"score_spread":0.2654253363447827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029504777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98388356,0.00053392624,0.000055469114,0.00053598365,0.000024397445,0.00018992697,0.000026741565,0.000055199016,0.014694812],"genre_scores_gemma":[0.9975679,0.00035758025,0.00066173624,0.0010784834,0.00011714278,0.000004259775,0.000003259029,0.00001892416,0.00019070819],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988269,0.000037153568,0.0002200843,0.00016652072,0.00048341087,0.00026592033],"domain_scores_gemma":[0.99936336,0.000033503467,0.00004745229,0.00029226148,0.000096055875,0.00016733736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016335395,0.00009663794,0.00024987067,0.00016768966,0.000025912776,0.000014049134,0.00012584862,0.00007694256,0.0004386443],"category_scores_gemma":[0.00014672334,0.00008540002,0.000075528136,0.0002125073,0.000079593374,0.00014722656,0.000033322136,0.00019588377,0.00016107284],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021997455,0.0020577281,0.1725246,0.00029737255,0.00040013305,0.0016656377,0.006685293,0.00021491639,0.477333,0.009171305,0.062444296,0.26500595],"study_design_scores_gemma":[0.006260602,0.0057849265,0.73462105,0.0009153589,0.00020184755,0.000080041296,0.00077851774,0.012628841,0.13306618,0.0034738875,0.10141138,0.0007773966],"about_ca_topic_score_codex":0.00029992886,"about_ca_topic_score_gemma":0.000015338956,"teacher_disagreement_score":0.5620964,"about_ca_system_score_codex":0.000040748477,"about_ca_system_score_gemma":0.00014803026,"threshold_uncertainty_score":0.48028475},"labels":[],"label_agreement":null},{"id":"W2036403183","doi":"10.3390/v6083311","title":"Immunogenetics of Small Ruminant Lentiviral Infections","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Immune system; Virology; Biology; Lentivirus; Virus; Disease; Immunology; Viral disease; Medicine","score_opus":0.07802968736247108,"score_gpt":0.35092836885853873,"score_spread":0.27289868149606766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036403183","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023695824,0.9974573,0.000036898116,0.0000021071628,0.000404252,0.00039176072,0.0005135855,0.00003166367,0.0009254606],"genre_scores_gemma":[0.00011864405,0.99715173,0.000030492818,0.000005997158,0.000028211722,0.00010059512,0.00043747423,0.000029555486,0.0020973207],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986048,0.0003637291,0.0004370049,0.00023887063,0.000028108845,0.0003275161],"domain_scores_gemma":[0.99901545,0.00025737312,0.00022821366,0.0004346855,0.00004404933,0.000020242049],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013805064,0.00027133682,0.0010970329,0.00021450387,0.000105375744,0.000009512098,0.00024341221,0.00034718614,0.00038838256],"category_scores_gemma":[0.00007361774,0.00019120854,0.00041294546,0.00014708839,0.00023755564,0.00001800391,0.00013806598,0.00028718717,0.005546548],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008176622,0.00032691582,0.00009182752,0.002647338,0.001050737,0.0000045385023,0.000012338374,8.88355e-8,0.00036159364,0.00021356341,0.0013734809,0.9939094],"study_design_scores_gemma":[0.00027085873,0.0003663892,0.000023332757,0.0017493588,0.0005191218,0.000039105806,0.000003168834,1.3583726e-8,0.0009841454,0.0000078696885,0.99588215,0.0001545105],"about_ca_topic_score_codex":0.00020446656,"about_ca_topic_score_gemma":0.00006533655,"teacher_disagreement_score":0.9945086,"about_ca_system_score_codex":0.000041221014,"about_ca_system_score_gemma":0.0002163413,"threshold_uncertainty_score":0.99522775},"labels":[],"label_agreement":null},{"id":"W2037186354","doi":"10.3390/v6051897","title":"Molecular Phylogeny of Hantaviruses Harbored by Insectivorous Bats in Côte d’Ivoire and Vietnam","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; U.S. Public Health Service; National Institutes of Health; Agency for Defense Development","keywords":"Biology; Hantavirus; Zoology; Phylogenetic tree; Insectivore; Phylogenetics; Lineage (genetic); Evolutionary biology; Clade; Hantavirus Infection; Virology; Ecology; Genetics; Virus; Gene","score_opus":0.011569173681472505,"score_gpt":0.26496447671187956,"score_spread":0.253395303030407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037186354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974042,0.0012297807,0.00015701761,0.000052284053,0.00007680916,0.00018232384,0.000018341196,0.00004041791,0.00083878846],"genre_scores_gemma":[0.9988132,0.00016358649,0.000104673745,0.0008152148,0.000037242473,0.000015879292,0.000004250833,0.000022948223,0.00002297224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922186,0.00006120265,0.0002223577,0.0002084756,0.00011873927,0.00016735845],"domain_scores_gemma":[0.9995744,0.00004422351,0.000064951295,0.00020379836,0.000037461643,0.000075141754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012144556,0.00013501961,0.0002937668,0.00015006677,0.00003894896,0.0000114603345,0.000044686833,0.0000871906,0.000035442376],"category_scores_gemma":[0.00012666242,0.00011558704,0.000047921614,0.00022934041,0.000108634966,0.00008104594,0.000034347213,0.00011819077,0.00000918714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000719293,0.0001848973,0.13352521,0.000059485188,0.00003430012,0.000008868267,0.000105802545,0.000008002901,0.86107147,0.00021588829,0.0003708974,0.004343267],"study_design_scores_gemma":[0.0019231425,0.0009417161,0.20552771,0.00018694185,0.00006971257,0.000030399351,0.00006003611,0.00030870124,0.77257377,0.00018824018,0.017942522,0.0002470815],"about_ca_topic_score_codex":0.0011453793,"about_ca_topic_score_gemma":0.0001676179,"teacher_disagreement_score":0.08849766,"about_ca_system_score_codex":0.000022896134,"about_ca_system_score_gemma":0.000026785403,"threshold_uncertainty_score":0.47135028},"labels":[],"label_agreement":null},{"id":"W2037527629","doi":"10.3390/v3112301","title":"Complete Sequence, Analysis and Organization of the Orgyia leucostigma Nucleopolyhedrovirus Genome","year":2011,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada; Canadian Forest Service","funders":"Natural Environment Research Council","keywords":"ORFS; Genome; Biology; Genetics; Whole genome sequencing; Phylogenetic tree; Open reading frame; Gene; Peptide sequence","score_opus":0.03230771566551339,"score_gpt":0.2510968962216534,"score_spread":0.21878918055614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037527629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983273,0.0002646549,0.00055644516,0.000007138338,0.0000707242,0.000073084826,0.00010793105,0.000009800175,0.0005829237],"genre_scores_gemma":[0.9991209,0.00015421039,0.00013999466,0.0004408828,0.000041598494,0.000003202178,0.000027848944,0.000011825205,0.000059545477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994665,0.000045404442,0.00013739188,0.00018106583,0.000073172494,0.0000964918],"domain_scores_gemma":[0.9994853,0.0000048917386,0.00009844307,0.0002869618,0.00007780516,0.000046556597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000038065435,0.00008794612,0.00010445216,0.000049500253,0.000111483954,0.000011817519,0.00013907683,0.000059305137,0.00018723238],"category_scores_gemma":[0.00005367989,0.00006310652,0.00006417105,0.0003634226,0.00012732271,0.00000512527,0.00013232563,0.000030703304,0.0000057458196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011458107,0.000027560676,0.20123401,0.0000062678637,0.00013129547,3.2417194e-7,0.00005633825,0.000016199374,0.79813004,0.00011703862,0.00013546467,0.00013400415],"study_design_scores_gemma":[0.00016845806,0.00009050125,0.41744414,0.0000055162095,0.00019446603,0.0000036410963,0.000036899415,0.00001358055,0.5777943,0.000114357805,0.004004872,0.00012927868],"about_ca_topic_score_codex":0.00032076973,"about_ca_topic_score_gemma":0.000059748963,"teacher_disagreement_score":0.22033574,"about_ca_system_score_codex":0.0000042245633,"about_ca_system_score_gemma":0.000028126688,"threshold_uncertainty_score":0.25734094},"labels":[],"label_agreement":null},{"id":"W2039400815","doi":"10.3390/v7010180","title":"The Standard Scrapie Cell Assay: Development, Utility and Prospects","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Prion Research Institute","keywords":"Scrapie; Infectivity; Bioassay; Biology; Virology; In vitro; Prion protein; In vitro toxicology; Transmissible spongiform encephalopathy; Disease; Prion Proteins; Computational biology; Cell; Pathogenesis; Immunology; Medicine; Virus; Genetics; Pathology","score_opus":0.056975644111255344,"score_gpt":0.33669871271533774,"score_spread":0.2797230686040824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039400815","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012560262,0.9985875,0.000048750524,0.000005781546,0.00011097345,0.00051472295,0.00011244475,0.00001529628,0.00047896183],"genre_scores_gemma":[0.000086689186,0.998964,0.0002763442,0.000064350104,0.0001530443,0.00009089866,0.000072393275,0.00003312671,0.00025914347],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987722,0.00014737973,0.00027907998,0.00038769742,0.00016986483,0.00024378479],"domain_scores_gemma":[0.9991812,0.00003281463,0.00017703221,0.00039667485,0.00007056055,0.00014170441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000631294,0.00027127782,0.00041217406,0.000023184486,0.00022437568,0.00011451803,0.00026247188,0.00020582505,0.000014788499],"category_scores_gemma":[0.00013675504,0.00017306097,0.000115419236,0.000069408336,0.00009584032,0.0000030204533,0.00030475637,0.00012713624,0.00001953216],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020962536,0.000011999677,0.000021113816,0.0011570528,0.000066729044,0.000002068631,0.0000055294854,1.8262451e-8,0.000037873135,0.00001652779,0.0044347188,0.9942254],"study_design_scores_gemma":[0.000121333804,0.000045614703,0.0000042651127,0.00041035123,0.00008689179,0.000004125682,0.0000062838903,2.03517e-7,0.00091046165,0.00006689146,0.99811304,0.00023056289],"about_ca_topic_score_codex":0.0000043560676,"about_ca_topic_score_gemma":0.0000100639345,"teacher_disagreement_score":0.99399483,"about_ca_system_score_codex":0.00002545683,"about_ca_system_score_gemma":0.0007790382,"threshold_uncertainty_score":0.70572215},"labels":[],"label_agreement":null},{"id":"W2046373840","doi":"10.3390/v4040471","title":"Bacteriophages with the Ability to Degrade Uropathogenic Escherichia Coli Biofilms","year":2012,"lang":"en","type":"article","venue":"Viruses","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Université de Montréal; Université Laval; McGill University; Biotechnology Research Institute; Public Health Agency of Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Escherichia coli; Biofilm; Microbiology; Biology; Bacteria; Chemistry; Genetics; Gene","score_opus":0.029773824931832074,"score_gpt":0.28245679479779207,"score_spread":0.25268296986596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046373840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468803,0.00032263025,0.00015388637,0.0014514455,0.0001715552,0.0006054837,0.000007718911,0.00013909719,0.002460137],"genre_scores_gemma":[0.9940544,0.000016176395,0.0014044449,0.0036529226,0.00021004725,0.00011513518,0.000002684188,0.000025954712,0.000518252],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991541,0.00006969661,0.00012789795,0.00017012098,0.00017832639,0.00029988843],"domain_scores_gemma":[0.9991773,0.000067782385,0.00004412768,0.00050856674,0.000033853466,0.00016841399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026182612,0.00014458028,0.00014936761,0.00006832688,0.00012621003,0.000026892889,0.00009797775,0.000032489545,0.00034780955],"category_scores_gemma":[0.000054575034,0.00008348006,0.000048844104,0.00036010522,0.000079489066,0.00016148444,0.000063091604,0.00013632872,0.00052312127],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045324236,0.003368778,0.42204195,0.000114311384,0.00020239603,0.000029910376,0.0007843985,0.00001513678,0.5617054,0.00053623633,0.0065792836,0.0041689137],"study_design_scores_gemma":[0.00026340428,0.0008642134,0.79811245,0.00001548828,0.00014978336,0.000029594867,0.00012915758,0.000001840763,0.019869294,0.0000013795933,0.18045558,0.00010782261],"about_ca_topic_score_codex":0.00009919376,"about_ca_topic_score_gemma":0.000016193373,"teacher_disagreement_score":0.54183614,"about_ca_system_score_codex":0.000065605134,"about_ca_system_score_gemma":0.000030307114,"threshold_uncertainty_score":0.672384},"labels":[],"label_agreement":null},{"id":"W2048297172","doi":"10.3390/v2010189","title":"Interaction of Host Cellular Proteins with Components of the Hepatitis Delta Virus","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Blood Services; University of Ottawa","funders":"","keywords":"HEPATITIS DELTA; Hepatitis D virus; RNA; Biology; Transcription (linguistics); Hepatitis D; Virology; RNA polymerase; Virus; Hepatitis B virus; Cell biology; Genetics; Gene","score_opus":0.028820608397470127,"score_gpt":0.2719650987029128,"score_spread":0.24314449030544266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048297172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99795055,0.00007349539,0.00005753616,0.00012571373,0.00027376853,0.00051731203,0.000081503655,0.000024886056,0.0008952368],"genre_scores_gemma":[0.9988771,0.0000745348,0.00066280516,0.0001978806,0.00006633941,0.00002920814,0.0000053554563,0.00002093483,0.00006582149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911153,0.00003808095,0.00026880877,0.00014075865,0.00030907904,0.00013176545],"domain_scores_gemma":[0.9991297,0.000058597307,0.0002084537,0.00038545646,0.0001753136,0.00004248107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008634476,0.00011998638,0.0002795713,0.000066829714,0.00006907274,0.000005074078,0.0001136192,0.000054543932,0.00013271082],"category_scores_gemma":[0.00015672068,0.000073177056,0.000062824416,0.00016972207,0.00026237426,0.00009117882,0.00007831385,0.00022153406,0.000018765353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008583086,0.00013912382,0.40003538,0.00005670373,0.000061973864,0.0000039632246,0.00022669666,5.230822e-7,0.5988376,0.000059444013,0.00012856214,0.00036421095],"study_design_scores_gemma":[0.0003569292,0.0001949425,0.3824094,0.00017481798,0.00005541157,0.0000072112794,0.000019909085,0.000021035066,0.6117537,0.000010918129,0.004942365,0.000053349795],"about_ca_topic_score_codex":0.024511926,"about_ca_topic_score_gemma":0.01627512,"teacher_disagreement_score":0.017625967,"about_ca_system_score_codex":0.000019629726,"about_ca_system_score_gemma":0.000049353323,"threshold_uncertainty_score":0.98198396},"labels":[],"label_agreement":null},{"id":"W2048996352","doi":"10.3390/v7010320","title":"ERVK Polyprotein Processing and Reverse Transcriptase Expression in Human Cell Line Models of Neurological Disease","year":2015,"lang":"en","type":"article","venue":"Viruses","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Winnipeg","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation; University of Winnipeg; Manitoba Health Research Council; Manitoba Medical Service Foundation; ALS Association","keywords":"Biology; Western blot; Gene isoform; Reverse transcriptase; Cell culture; Retrovirus; Context (archaeology); Proinflammatory cytokine; Reverse transcription polymerase chain reaction; Cell biology; Gene expression; Molecular biology; Virology; Immunology; RNA; Inflammation; Gene; Genetics","score_opus":0.07418924295110987,"score_gpt":0.25651125066681096,"score_spread":0.1823220077157011,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048996352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998583,0.0007319034,0.000011148716,0.0003711408,0.000014120512,0.00012400534,0.000051761635,0.000017758146,0.00009516319],"genre_scores_gemma":[0.99947953,0.000018519737,0.00017457786,0.00023089496,0.000046007677,0.000010354649,0.00001143242,5.639537e-7,0.000028120321],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994292,0.000052981635,0.00014592482,0.00016495399,0.00010375061,0.00010317201],"domain_scores_gemma":[0.99975806,0.000017864311,0.000042739845,0.000031325722,0.000023263628,0.00012672445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000073993884,0.000070961716,0.00009560336,0.000009751419,0.000054691016,0.000015171173,0.00007672829,0.00004008658,0.0000400577],"category_scores_gemma":[0.000019240144,0.000027460968,0.000022149661,0.00011501936,0.00004143353,0.00011296505,0.00003423793,0.000051732575,0.0000011049032],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082297265,0.00023722796,0.012911776,0.000014257729,5.147885e-7,0.000007768392,0.00014629074,0.00020106803,0.98311853,0.00006629209,0.000045070883,0.003168895],"study_design_scores_gemma":[0.0034363163,0.0031454072,0.54992807,0.00037347092,0.000086499706,0.000007791146,0.0008813271,0.01669621,0.36641774,0.049249288,0.008717317,0.001060583],"about_ca_topic_score_codex":0.0001808471,"about_ca_topic_score_gemma":0.00006685709,"teacher_disagreement_score":0.6167008,"about_ca_system_score_codex":0.0000027843835,"about_ca_system_score_gemma":0.00000874686,"threshold_uncertainty_score":0.11198258},"labels":[],"label_agreement":null},{"id":"W2052825942","doi":"10.3390/v2030710","title":"Complete Genomic Sequence of Bacteriophage Felix O1","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Health Canada; Public Health Agency of Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacteriophage; Biology; Capsid; Myoviridae; Gene; Escherichia coli; Genetics; Genome; Cosmid; Erwinia; Open reading frame; Molecular biology; Peptide sequence","score_opus":0.031542976772234735,"score_gpt":0.27165301235377076,"score_spread":0.24011003558153604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052825942","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99501157,0.000007737742,0.00003461268,0.000052812193,0.0004055031,0.00008112764,0.00017135932,0.000028464377,0.0042068153],"genre_scores_gemma":[0.99713874,0.000014067196,0.0019105062,0.00046112342,0.00005078246,0.0000045538122,0.0000084160865,0.000012024626,0.0003997814],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994162,0.000015038942,0.00017053277,0.0001734091,0.00006582559,0.00015903715],"domain_scores_gemma":[0.99957544,0.000026972533,0.0000837442,0.00024994393,0.000005081401,0.0000588386],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005781162,0.000092906106,0.00011193932,0.000021234551,0.000073738214,0.000024417814,0.00021852477,0.00004377538,0.013723424],"category_scores_gemma":[0.000013884628,0.000085085565,0.000050611765,0.00007613896,0.0002097887,0.00024099073,0.00014073093,0.00014432434,0.001850061],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007291487,0.000031455435,0.0021390216,0.0000029943276,0.0000045084175,0.0000028396603,0.00008209587,0.000007464423,0.9953313,0.000045197627,0.0005085535,0.0018372645],"study_design_scores_gemma":[0.00016391373,0.000049096587,0.32932884,0.000009222722,0.00001266882,0.000039272665,0.000022394726,0.000051055817,0.3346291,0.00006042513,0.3354554,0.00017864916],"about_ca_topic_score_codex":0.0015254259,"about_ca_topic_score_gemma":0.0005943266,"teacher_disagreement_score":0.6607022,"about_ca_system_score_codex":0.000026206108,"about_ca_system_score_gemma":0.000006402191,"threshold_uncertainty_score":0.9989271},"labels":[],"label_agreement":null},{"id":"W2052961736","doi":"10.3390/v6093500","title":"1st International Symposium on Stress-Associated RNA Granules in Human Disease and Viral Infection","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beatrice Hunter Cancer Research Institute; Dalhousie University; Jewish General Hospital; McGill University; Queen's University","funders":"Canadian Institutes of Health Research; Université de Montréal; Dalhousie Medical Research Foundation","keywords":"Stress granule; Human disease; Disease; RNA; Infectious disease (medical specialty); Biology; Virology; Neuroscience; Medicine; Gene; Genetics; Pathology; Messenger RNA","score_opus":0.013112555479631293,"score_gpt":0.2898732123639731,"score_spread":0.2767606568843418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052961736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99902815,0.00003901901,0.000026627209,0.00010795296,0.00005664842,0.000056579123,0.000023639137,0.000008726395,0.0006526764],"genre_scores_gemma":[0.99917126,0.00014796194,0.0000041285157,0.00025465063,0.00011689183,0.000009792618,0.00009029541,0.000007826574,0.0001971855],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994958,0.00005490688,0.00008084794,0.00015682538,0.00009310092,0.000118485696],"domain_scores_gemma":[0.9997862,0.000010660153,0.000026438649,0.00009241304,0.000021312404,0.00006298148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000967863,0.000065974804,0.000053948326,0.000044655466,0.00005848094,0.000034943932,0.00006132647,0.0000436902,0.0000073612678],"category_scores_gemma":[0.00011194809,0.00006111851,0.000021990749,0.000027168913,0.00003626579,0.0000058135606,0.00004899582,0.00005908427,0.0000034857474],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076175165,0.00007986985,0.19718546,0.0000059084796,0.000015843478,0.0000017032037,0.000007251735,0.00006047899,0.801373,0.00023465314,0.00016237724,0.00079726905],"study_design_scores_gemma":[0.0013260419,0.00046968478,0.60815835,0.000080872676,0.000009215962,5.74986e-7,0.0000109316225,0.0006618421,0.38409922,0.00031101707,0.0046621794,0.00021008067],"about_ca_topic_score_codex":0.00036941108,"about_ca_topic_score_gemma":0.0005841279,"teacher_disagreement_score":0.4172738,"about_ca_system_score_codex":0.0000138898995,"about_ca_system_score_gemma":0.000008513415,"threshold_uncertainty_score":0.24923405},"labels":[],"label_agreement":null},{"id":"W2053618218","doi":"10.3390/v2102169","title":"Inhibitors of the Hepatitis C Virus RNA-Dependent RNA Polymerase NS5B","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; University of California, San Francisco; National Institutes of Health; Canadian Institutes of Health Research; Cancer Research Society","keywords":"NS5B; Ribavirin; Virology; Hepatitis C virus; Polymerase; RNA polymerase; RNA-dependent RNA polymerase; Virus; Pegylated interferon; RNA virus; Biology; RNA; Medicine; Hepacivirus; Gene; Genetics","score_opus":0.025425143421968124,"score_gpt":0.31205791947860884,"score_spread":0.2866327760566407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053618218","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99210656,0.0002945898,0.000008709207,0.000742504,0.00091927894,0.0004616257,0.00013714454,0.00015024246,0.005179333],"genre_scores_gemma":[0.99693173,0.0004372636,0.00014904686,0.0013382541,0.00043659465,0.000035627778,0.0000032865953,0.00008593294,0.00058228197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782693,0.00010684961,0.0004323277,0.0002930857,0.00094140944,0.0003994011],"domain_scores_gemma":[0.9984472,0.0001514332,0.0001351834,0.0008600556,0.00015916952,0.00024696195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031470906,0.00018585616,0.00032674163,0.00017725088,0.00013544172,0.000030426594,0.00033148585,0.00016582785,0.0008425523],"category_scores_gemma":[0.0007899854,0.0001331706,0.00016876454,0.00037919133,0.00034338477,0.0001470187,0.00022436597,0.0006931593,0.00041614656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006586165,0.00018418011,0.18258753,0.000040259805,0.00005230583,0.000048093923,0.0001515401,5.3347185e-7,0.7787799,0.00026418662,0.0034276715,0.03439791],"study_design_scores_gemma":[0.0007165759,0.00013366733,0.063096784,0.00007676948,0.000040244362,0.000015317068,0.000017310076,0.000025171186,0.9072283,0.00006098217,0.028457372,0.00013153859],"about_ca_topic_score_codex":0.018956015,"about_ca_topic_score_gemma":0.007915549,"teacher_disagreement_score":0.12844835,"about_ca_system_score_codex":0.00005296209,"about_ca_system_score_gemma":0.000330734,"threshold_uncertainty_score":0.98757684},"labels":[],"label_agreement":null},{"id":"W2058045419","doi":"10.3390/v6114505","title":"Cholesterol Balance in Prion Diseases and Alzheimer’s Disease","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Alberta Prion Research Institute","keywords":"Lipid raft; Cholesterol; Endosome; Cell biology; Biology; Glycoprotein; Gene isoform; Homeostasis; Biochemistry; Cell; Gene","score_opus":0.04000273258990221,"score_gpt":0.33932715173054795,"score_spread":0.2993244191406457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058045419","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00073856174,0.9983592,0.000018307206,0.0000118944145,0.0000971073,0.0005118413,0.00022748347,0.000016689635,0.00001888908],"genre_scores_gemma":[0.0012428456,0.9975627,0.000026899683,0.00035860194,0.00033082865,0.00017541033,0.0002354455,0.00005009017,0.000017182945],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986226,0.00016265307,0.00031487228,0.00054954353,0.00010684162,0.00024349074],"domain_scores_gemma":[0.9990957,0.000027995164,0.00016342527,0.0004499722,0.000014860839,0.0002480613],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008927005,0.0003330539,0.00059547264,0.00008067338,0.00004880628,0.000058685004,0.00022898392,0.00017234232,0.000017873648],"category_scores_gemma":[0.000113580325,0.0002866727,0.00019653887,0.0000785571,0.00006664348,0.000006190942,0.0002101495,0.00010781083,0.000022624887],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025960655,0.00004769569,0.0018890123,0.0027329847,0.000064084794,0.000006158928,0.0000017363247,0.0000011347033,0.000027521393,0.000024480187,0.00050051376,0.99467874],"study_design_scores_gemma":[0.00020052363,0.000038467588,0.0013790637,0.0027814663,0.00037773955,0.0000032803077,9.158128e-7,0.0000038769886,0.000017433955,0.00002066763,0.9948348,0.00034178115],"about_ca_topic_score_codex":0.000013942166,"about_ca_topic_score_gemma":0.0000051104594,"teacher_disagreement_score":0.99433696,"about_ca_system_score_codex":0.000010730606,"about_ca_system_score_gemma":0.00013464925,"threshold_uncertainty_score":0.9999585},"labels":[],"label_agreement":null},{"id":"W2062282550","doi":"10.3390/v2081752","title":"Hepatitis C Virus NS3/4A Protease Inhibitors: A Light at the End of the Tunnel","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer","funders":"","keywords":"NS3; Protease; Hepatitis C virus; Virology; Serine protease; NS2-3 protease; Drug discovery; Biology; Virus; Pharmacology; Enzyme; Biochemistry","score_opus":0.025050376046132188,"score_gpt":0.30148845815091313,"score_spread":0.27643808210478094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062282550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98695946,0.0003002996,0.0000026039183,0.004229442,0.000458897,0.0013042326,0.0001431129,0.000056419954,0.0065455055],"genre_scores_gemma":[0.9953598,0.0002843263,0.00008632321,0.0015736303,0.0005146282,0.00020059124,0.000004880661,0.000049256225,0.0019265763],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786067,0.00017346673,0.00039107143,0.0002988702,0.0008773972,0.00039851575],"domain_scores_gemma":[0.9981427,0.000219363,0.00014292008,0.001122882,0.00018185336,0.00019023634],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046964307,0.0001987035,0.00028782504,0.00009949038,0.00027184002,0.0000357028,0.00039770018,0.00015384777,0.002590285],"category_scores_gemma":[0.001369293,0.00010340291,0.0001801881,0.00041834483,0.000621068,0.00012348109,0.00039225712,0.0006841209,0.0005831946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011226562,0.0001761564,0.23337597,0.00006568802,0.00005380995,0.000030273191,0.00044272674,3.8636847e-7,0.73637277,0.00021326909,0.020965056,0.008191629],"study_design_scores_gemma":[0.0005276697,0.0001244222,0.05813825,0.00009513254,0.00003796558,0.000021107688,0.00001801808,0.000022447906,0.67435384,0.00009020049,0.26646703,0.00010393533],"about_ca_topic_score_codex":0.010921862,"about_ca_topic_score_gemma":0.022065623,"teacher_disagreement_score":0.24550197,"about_ca_system_score_codex":0.00007766557,"about_ca_system_score_gemma":0.0003365941,"threshold_uncertainty_score":0.9983215},"labels":[],"label_agreement":null},{"id":"W2064233244","doi":"10.3390/v1020084","title":"Molecular Characterization of Viruses from Clinical Respiratory Samples Producing Unidentified Cytopathic Effects in Cell Culture","year":2009,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Virology; Biology; Cytopathic effect; Virus; Primer (cosmetics); Amplicon; Sequence analysis; Viral culture; Polymerase chain reaction; Sequence (biology); Genetics; Gene; Chemistry","score_opus":0.09388964511561497,"score_gpt":0.39965920869078114,"score_spread":0.30576956357516616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064233244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997626,0.0007251503,0.0003384621,0.000050346647,0.00016846471,0.00075615593,0.000024470251,0.000080479665,0.00023047165],"genre_scores_gemma":[0.9955734,0.00009377931,0.00022315697,0.0037598677,0.00023275791,0.0000261135,0.000027302709,0.000027988326,0.00003563899],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99748087,0.00058220705,0.0007598084,0.0005017656,0.00041202354,0.0002632964],"domain_scores_gemma":[0.99868494,0.00017860274,0.00021554012,0.0006115712,0.00018487392,0.00012445611],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074698555,0.00019693286,0.0005075241,0.00036390277,0.000058046797,0.00004029353,0.0001553682,0.00023764267,0.000044413333],"category_scores_gemma":[0.0014000153,0.00017276118,0.000120590834,0.0006392741,0.00011955821,0.00027152483,0.000050345483,0.00048952264,0.000059540533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021981029,0.00044786333,0.16320993,0.00009946517,0.00001950224,0.00007755821,0.00018087412,0.000008451564,0.83237165,0.00006515184,0.000067490495,0.003232255],"study_design_scores_gemma":[0.0007972824,0.0005701351,0.41456667,0.00022017522,0.000030288353,9.190636e-7,0.000015254697,0.00001007967,0.58143365,0.00009169343,0.0021675767,0.000096237614],"about_ca_topic_score_codex":0.00017839311,"about_ca_topic_score_gemma":0.00002791821,"teacher_disagreement_score":0.25135675,"about_ca_system_score_codex":0.00007074597,"about_ca_system_score_gemma":0.00018339066,"threshold_uncertainty_score":0.70449966},"labels":[],"label_agreement":null},{"id":"W2066141181","doi":"10.3390/v6072858","title":"Resistance Analyses of Integrase Strand Transfer Inhibitors within Phase 3 Clinical Trials of Treatment-Naive Patients","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"U.S. Department of Health and Human Services","keywords":"Raltegravir; Dolutegravir; Elvitegravir; Integrase inhibitor; Regimen; Medicine; Clinical trial; Darunavir; Integrase; Pharmacology; Clinical endpoint; Population; Drug resistance; Virology; Internal medicine; Oncology; Viral load; Biology; Human immunodeficiency virus (HIV); Antiretroviral therapy; Genetics","score_opus":0.371913622032879,"score_gpt":0.5418493594956924,"score_spread":0.16993573746281337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066141181","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013278632,0.9813163,0.000038423426,0.000018988454,0.00048444304,0.0028282637,0.001714871,0.000063664615,0.00025635827],"genre_scores_gemma":[0.0015245469,0.9952053,0.00033131766,0.0000173878,0.00018452256,0.0001285709,0.0007922123,0.00008168874,0.0017344862],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9930189,0.0012336865,0.0045384034,0.000548799,0.0004171063,0.0002430866],"domain_scores_gemma":[0.9953777,0.0023605612,0.0013068562,0.0005287812,0.00020091799,0.00022519227],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017191845,0.0006462892,0.0072113313,0.0005504917,0.00003832158,0.000010556552,0.00014015487,0.00039465193,0.0001102574],"category_scores_gemma":[0.0015971232,0.00036647505,0.0020487518,0.0005055535,0.00024050898,0.000060617094,0.000016129849,0.00021749135,0.00005460719],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022464816,0.0063874577,0.0022088196,0.018187024,0.014558852,0.00006515958,0.00060086884,3.1126672e-7,0.00003250736,0.00006616897,0.00533498,0.95031136],"study_design_scores_gemma":[0.016958827,0.0024327107,0.000026762738,0.03435095,0.028164556,0.0000017177454,0.00006847542,8.517966e-7,0.0036541473,0.000016846478,0.913864,0.00046014664],"about_ca_topic_score_codex":0.000054956112,"about_ca_topic_score_gemma":0.00007367132,"teacher_disagreement_score":0.9498512,"about_ca_system_score_codex":0.00015996861,"about_ca_system_score_gemma":0.0008167602,"threshold_uncertainty_score":0.9998787},"labels":[],"label_agreement":null},{"id":"W2066406444","doi":"10.3390/v5071885","title":"Baculovirus Nuclear Import: Open, Nuclear Pore Complex (NPC) Sesame","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Michael Smith Health Research BC","keywords":"Autographa californica; Biology; Spodoptera; Nuclear transport; Virology; Genome; Nucleus; Baculoviridae; Cell biology; Electron microscope; Cell nucleus; Genetics; Gene; Physics; Recombinant DNA","score_opus":0.12040717462697144,"score_gpt":0.3860354829319885,"score_spread":0.2656283083050171,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066406444","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005217048,0.9882232,0.0000036170886,0.000017826993,0.0005813827,0.0012704615,0.0006091461,0.00008994548,0.008682733],"genre_scores_gemma":[0.00021696182,0.99370205,0.00028026305,0.0023629763,0.0008919129,0.00015107161,0.00097172183,0.00027994026,0.0011431105],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972481,0.00022638941,0.0007380784,0.0010107703,0.00023493066,0.00054169825],"domain_scores_gemma":[0.99773955,0.000022560575,0.0005619926,0.0012285539,0.00009633403,0.00035101568],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012847337,0.00074681046,0.0013238661,0.00011143055,0.0003421656,0.0004500299,0.0013679034,0.0006913877,0.003919945],"category_scores_gemma":[0.000082240746,0.0006039324,0.0007428531,0.00018817036,0.00017074955,0.000023273742,0.0016154113,0.0003226779,0.0019840766],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003671704,0.00025272582,0.000008048922,0.0020965948,0.0004782926,0.00003524791,0.0000143967045,0.0000016566698,0.0036363178,0.00028241158,0.681988,0.3111696],"study_design_scores_gemma":[0.00026925342,0.0003143108,0.0000069874436,0.0010350608,0.00028729456,0.000092083195,0.000020088148,0.0000025724064,0.000075868855,0.00003988456,0.99706966,0.0007869222],"about_ca_topic_score_codex":0.00030150398,"about_ca_topic_score_gemma":0.000013335192,"teacher_disagreement_score":0.3150817,"about_ca_system_score_codex":0.000044110908,"about_ca_system_score_gemma":0.00024073731,"threshold_uncertainty_score":0.9996412},"labels":[],"label_agreement":null},{"id":"W2066948522","doi":"10.3390/v5020654","title":"Low Copper and High Manganese Levels in Prion Protein Plaques","year":2013,"lang":"en","type":"article","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Division of Materials Research; National Institute of Neurological Disorders and Stroke; Division of Chemistry; U.S. Department of Defense; National Science Foundation","keywords":"Manganese; Hamster; Copper; Neurodegeneration; Prion protein; Chemistry; Pathology; Transmissible spongiform encephalopathy; Biology; Mesocricetus; Virology; Molecular biology; Scrapie; Medicine; Disease","score_opus":0.013874262879894676,"score_gpt":0.2503987544186681,"score_spread":0.23652449153877342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066948522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536145,0.0040163663,0.000033826593,0.0001254118,0.000023857183,0.00035515055,0.000014535605,0.000011626535,0.000057750225],"genre_scores_gemma":[0.998316,0.0004961023,0.00037280074,0.000513408,0.000074068645,0.00009671733,0.000011592608,0.000012825413,0.00010647721],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99944013,0.00003781044,0.00010859192,0.00020266992,0.000060027007,0.00015079486],"domain_scores_gemma":[0.9997316,0.000005644698,0.00003093269,0.00014947036,0.000021910433,0.000060425642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000060048216,0.00009610659,0.000081814724,0.00003162915,0.000034652694,0.000040317726,0.00007663611,0.000081884005,0.00011409946],"category_scores_gemma":[0.00004923094,0.00008440621,0.000021177855,0.000037974183,0.000036875655,0.000010448139,0.00008070048,0.000043938224,0.000033440792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002426631,0.000031846816,0.0047691665,0.000029078623,0.0000080808895,0.0000028018692,0.000018084522,0.0000031341688,0.96846664,0.00008582238,0.00052080065,0.026040278],"study_design_scores_gemma":[0.0004340794,0.00011275956,0.052690085,0.00006101006,0.0000031895904,0.0000030650772,0.00003135078,0.00001483201,0.9366959,0.00048762865,0.009287262,0.00017886526],"about_ca_topic_score_codex":0.0003105334,"about_ca_topic_score_gemma":0.000038820133,"teacher_disagreement_score":0.047920916,"about_ca_system_score_codex":0.000006027399,"about_ca_system_score_gemma":0.000021978214,"threshold_uncertainty_score":0.34419852},"labels":[],"label_agreement":null},{"id":"W2067406742","doi":"10.3390/v6114609","title":"Implication of Human Endogenous Retrovirus Envelope Proteins in Placental Functions","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; March of Dimes Foundation","keywords":"Syncytiotrophoblast; Endogenous retrovirus; Biology; Microvesicles; Placenta; Cell biology; Context (archaeology); Fusion protein; Gene; Exosome; Genetics; Genome; Fetus; microRNA; Pregnancy; Recombinant DNA","score_opus":0.05787686651991566,"score_gpt":0.3314674853390447,"score_spread":0.27359061881912905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067406742","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045889746,0.993011,0.00008598224,0.0000014218409,0.00008081296,0.00093131594,0.00024326218,0.000016111095,0.0010411043],"genre_scores_gemma":[0.013917829,0.98401296,0.0001417881,0.000032751246,0.00025653193,0.00033237532,0.0009732198,0.00007869127,0.00025384597],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984554,0.00017880058,0.00056883675,0.00045068472,0.00012758082,0.00021870139],"domain_scores_gemma":[0.9987785,0.000018836829,0.00037371006,0.0007186715,0.000036961304,0.000073326104],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001815301,0.00027920146,0.00059434056,0.00013308419,0.000058014968,0.0000135129885,0.00034584926,0.00033188288,0.000040440344],"category_scores_gemma":[0.00010682571,0.00026760265,0.00025739116,0.00015493539,0.00010195614,0.0000035755354,0.00015607961,0.00016668579,0.000066339504],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045562687,0.0005696206,0.00041554205,0.008432351,0.00022190093,0.000012461195,0.000024898596,0.0000027410756,0.59878457,0.0002615369,0.0011846911,0.39004415],"study_design_scores_gemma":[0.0002145176,0.00019072469,0.000032425643,0.000816103,0.00015496794,0.000021045427,0.0000070518213,1.6913248e-7,0.034918085,0.000014935658,0.9633398,0.00029016734],"about_ca_topic_score_codex":0.00006423976,"about_ca_topic_score_gemma":0.000050695828,"teacher_disagreement_score":0.9621551,"about_ca_system_score_codex":0.00005403777,"about_ca_system_score_gemma":0.00020815071,"threshold_uncertainty_score":0.9999776},"labels":[],"label_agreement":null},{"id":"W2073195103","doi":"10.3390/v4123912","title":"Hepatitis C Virus in American Indian/Alaskan Native and Aboriginal Peoples of North America","year":2012,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Hepatitis C; Hepatitis C virus; Population; Epidemiology; Indigenous; Etiology; Immunology; Disease; Liver disease; Psychological intervention; Incidence (geometry); Demography; Virus; Internal medicine; Environmental health; Biology; Psychiatry","score_opus":0.05674387478980346,"score_gpt":0.4006908911856798,"score_spread":0.3439470163958763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073195103","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06243044,0.93442136,0.0000031706873,0.000015271196,0.000083397514,0.0010895316,0.001123058,0.000041090643,0.0007926734],"genre_scores_gemma":[0.0044469163,0.9942259,0.00038099693,0.00014581147,0.00020972341,0.00023548095,0.00017074068,0.00010491264,0.00007952773],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99682426,0.00042061383,0.000879286,0.0005329579,0.00067754235,0.0006653141],"domain_scores_gemma":[0.9976017,0.0007655816,0.000595602,0.00050931604,0.00013423205,0.00039359235],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022014666,0.00053367333,0.0029071188,0.0011621418,0.000052421183,0.000025468626,0.00026301492,0.00016300984,0.00026096278],"category_scores_gemma":[0.0003715259,0.00044367087,0.00023438392,0.0017284271,0.0008753274,0.0001857016,0.00013179496,0.00081604964,0.00018744398],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022486756,0.00016437817,0.21076524,0.0071773734,0.0001742372,0.0001206117,0.0006068016,3.6438646e-8,0.0000017365945,0.000011665275,0.00012117794,0.78083426],"study_design_scores_gemma":[0.0002737547,0.00041193768,0.058422998,0.0048685293,0.0003908771,0.000030461588,0.000044488643,9.559504e-7,0.000014344032,0.0000014405153,0.9352127,0.0003275379],"about_ca_topic_score_codex":0.043757603,"about_ca_topic_score_gemma":0.05375772,"teacher_disagreement_score":0.9350915,"about_ca_system_score_codex":0.00028125846,"about_ca_system_score_gemma":0.0013782334,"threshold_uncertainty_score":0.9998015},"labels":[],"label_agreement":null},{"id":"W2074178431","doi":"10.3390/v7020680","title":"Host Recovery and Reduced Virus Level in the Upper Leaves after Potato virus Y Infection Occur in Tobacco and Tomato but not in Potato Plants","year":2015,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Potato virus Y; Biology; Tobacco mosaic virus; Solanaceae; Inoculation; Potyvirus; Solanum; Host (biology); Virus; Virology; Solanum tuberosum; RNA; Plant virus; Horticulture; Gene; Genetics","score_opus":0.09770606160571249,"score_gpt":0.2947809448163517,"score_spread":0.1970748832106392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074178431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971271,0.0010739376,1.0701969e-7,0.00043851044,0.000071976574,0.00033771255,0.0007928302,0.000024250072,0.00013358619],"genre_scores_gemma":[0.99612266,0.0026499992,0.000013615319,0.0010049117,0.00006720008,0.0000911722,0.000012432425,0.000001960757,0.00003606302],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982346,0.00039675893,0.00028445144,0.00037416074,0.00029203494,0.00041799372],"domain_scores_gemma":[0.99910074,0.0006517909,0.00005529517,0.00007036361,0.00002662548,0.000095175266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008372632,0.00020589314,0.00027202172,0.000102106314,0.00010986861,0.00014651394,0.00015670375,0.0001127529,0.000021531128],"category_scores_gemma":[0.00048610778,0.00008284426,0.000027791684,0.00037129127,0.000120380675,0.00044326016,0.00018715452,0.00031403764,0.000039215625],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000782165,0.00015072945,0.47862637,0.00000985783,0.0000122128695,0.00010996246,0.0013510106,0.0000033318213,0.509672,0.000007558647,0.0009883632,0.008286457],"study_design_scores_gemma":[0.00038209106,0.0001760841,0.97186077,0.00007281835,0.00000279374,0.000027046837,0.0012500321,0.000009784211,0.023460025,0.000095309864,0.002456789,0.00020644168],"about_ca_topic_score_codex":0.029905895,"about_ca_topic_score_gemma":0.12619387,"teacher_disagreement_score":0.49323443,"about_ca_system_score_codex":0.00005813848,"about_ca_system_score_gemma":0.000020661406,"threshold_uncertainty_score":0.97655404},"labels":[],"label_agreement":null},{"id":"W2076708252","doi":"10.3390/v6093563","title":"The Adenovirus Genome Contributes to the Structural Stability of the Virion","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research; Government of Ontario","keywords":"Genome; Biology; Computational biology; Gene; Vector (molecular biology); Viral vector; Cloning (programming); Virus; Genetic enhancement; Viral replication; Virology; Genetics; Computer science; Recombinant DNA","score_opus":0.048301197349697705,"score_gpt":0.35972155840222897,"score_spread":0.31142036105253124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076708252","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014854932,0.9824971,0.00001917204,0.00027114645,0.00034118313,0.0015724472,0.0003753914,0.000008998258,0.000059657177],"genre_scores_gemma":[0.009702656,0.98883784,0.0000057600955,0.0006020854,0.0003928206,0.00019349901,0.00004824879,0.00006083545,0.0001562756],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970038,0.0011425734,0.00057882094,0.0004665731,0.00036847036,0.00043978757],"domain_scores_gemma":[0.99714637,0.00030067016,0.00032423373,0.0019807278,0.00017588904,0.00007209322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012718479,0.00037012534,0.0006738679,0.000039859606,0.0004605761,0.000085995445,0.0020318127,0.00027234937,0.000036861074],"category_scores_gemma":[0.00060128805,0.00015272471,0.0005164377,0.00032083114,0.0005017812,0.000002552969,0.0007009147,0.00036793796,0.000049215192],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010691045,0.00005188926,0.00012674576,0.0016983475,0.0011432715,7.2476166e-7,0.00007152458,0.000027532227,0.07265521,0.00026244036,0.0037820053,0.9191112],"study_design_scores_gemma":[0.00012454182,0.00040011032,0.00007536185,0.00018783852,0.00011741102,0.0000031880627,0.000011787648,9.525567e-7,0.023440406,0.00004199448,0.9754173,0.0001790891],"about_ca_topic_score_codex":0.00006141045,"about_ca_topic_score_gemma":0.0009505731,"teacher_disagreement_score":0.97163534,"about_ca_system_score_codex":0.00006213638,"about_ca_system_score_gemma":0.00044134285,"threshold_uncertainty_score":0.6227933},"labels":[],"label_agreement":null},{"id":"W2077271196","doi":"10.3390/v4123531","title":"Pathogenesis of Hepatitis C During Pregnancy and Childhood","year":2012,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Pathogenesis; Pregnancy; Medicine; Hepatitis; Virology; Obstetrics; Immunology; Biology; Genetics","score_opus":0.10199865710284946,"score_gpt":0.3710285869521372,"score_spread":0.26902992984928775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077271196","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017274332,0.9955401,0.0000011076652,0.0000042070305,0.00008463584,0.0010199223,0.00032710147,0.00005037986,0.0012451063],"genre_scores_gemma":[0.00080659677,0.9982166,0.00022246352,0.000014803563,0.00021725957,0.00016208709,0.000037726855,0.00010971133,0.00021274628],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980346,0.00016487982,0.00060773944,0.00035523582,0.00042232894,0.0004152419],"domain_scores_gemma":[0.99873257,0.00013854793,0.0002387535,0.00055579457,0.000072655566,0.00026168532],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000112847374,0.00034797657,0.0017367934,0.00037279486,0.000061097955,0.000015420303,0.00014309214,0.00029716158,0.00037450276],"category_scores_gemma":[0.00020874625,0.00027556103,0.00027075995,0.00032466193,0.00011728504,0.000114530674,0.00019797652,0.0003092114,0.0001467673],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000033885067,0.00012270024,0.0117965555,0.04159284,0.00021651827,0.000074699354,0.00006258239,2.295278e-9,0.000036385685,0.000018545004,0.000018314735,0.94605744],"study_design_scores_gemma":[0.00036654805,0.00011459783,0.01761078,0.06510207,0.001384135,0.0001621703,0.000002938985,1.2667962e-7,0.0001566179,0.000003323942,0.91479635,0.00030035042],"about_ca_topic_score_codex":0.00026016962,"about_ca_topic_score_gemma":0.00003170494,"teacher_disagreement_score":0.9457571,"about_ca_system_score_codex":0.00007002063,"about_ca_system_score_gemma":0.00027144616,"threshold_uncertainty_score":0.99996966},"labels":[],"label_agreement":null},{"id":"W2077353512","doi":"10.3390/v6020516","title":"Long-Term Single-Dose Efficacy of a Vesicular Stomatitis Virus-Based Andes Virus Vaccine in Syrian Hamsters","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institutes of Health","keywords":"Vesicular stomatitis virus; Virology; Vaccination; Medicine; Virus; Immunology; Immune system; Immunity","score_opus":0.030433919551124254,"score_gpt":0.29801491099912786,"score_spread":0.2675809914480036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077353512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796784,0.00025141332,0.0007027593,0.00010172796,0.00019105228,0.00037748067,0.000026959566,0.000109350796,0.00027143076],"genre_scores_gemma":[0.99876356,0.00002354093,0.0002388186,0.0007478063,0.00012408097,0.00001735501,0.00002322039,0.000038607723,0.000023001112],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99871653,0.00010418713,0.00042835943,0.00027476493,0.00021002983,0.0002661312],"domain_scores_gemma":[0.9990832,0.00016481659,0.00014171557,0.0004234399,0.00005927728,0.00012754537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020244492,0.00021445038,0.00047431735,0.0003970681,0.00005742223,0.000026932561,0.000091526235,0.00010805006,0.0003625164],"category_scores_gemma":[0.00022520257,0.000181696,0.00013772798,0.0004178622,0.000070574366,0.00014539612,0.000029515351,0.00014847284,0.000050054132],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059565564,0.0016350123,0.50426483,0.00022778724,0.000097070115,0.00005428783,0.00013370957,0.00014939958,0.47779447,0.000064109576,0.00021805381,0.014765591],"study_design_scores_gemma":[0.0048118783,0.0010785923,0.8240553,0.00048215417,0.00010747586,0.0000101099795,0.000009678848,0.00025605704,0.16795835,0.000009675391,0.0010216885,0.00019901518],"about_ca_topic_score_codex":0.00079725264,"about_ca_topic_score_gemma":0.0009450998,"teacher_disagreement_score":0.31979048,"about_ca_system_score_codex":0.0000752147,"about_ca_system_score_gemma":0.000048645135,"threshold_uncertainty_score":0.7409348},"labels":[],"label_agreement":null},{"id":"W2079898725","doi":"10.3390/v5123048","title":"Preclinical and Clinical Development of a YFV 17 D-Based Chimeric Vaccine against West Nile Virus","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Viremia; Virology; Immunogenicity; Neutralizing antibody; Medicine; Virus; Antibody; Immunology; Titer; Biology","score_opus":0.1265613946264054,"score_gpt":0.4327166176431752,"score_spread":0.3061552230167698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079898725","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003131911,0.9941073,0.00003425671,0.000036188565,0.00027826274,0.0018520025,0.0001288629,0.00007516926,0.0003560449],"genre_scores_gemma":[0.00030677931,0.99564147,0.0012971087,0.001359079,0.00053372467,0.00032140335,0.00021793948,0.00009328546,0.0002291926],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99593836,0.00023560355,0.0023169208,0.0007551096,0.00036882958,0.00038517304],"domain_scores_gemma":[0.9968881,0.00081980275,0.000883339,0.00077170826,0.00013072754,0.0005063207],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00050610513,0.0005773073,0.0034105335,0.0001864433,0.000074701275,0.000032886757,0.0002666767,0.0004709906,0.00087464304],"category_scores_gemma":[0.0005660554,0.00040172949,0.00080993504,0.00023293313,0.00012068062,0.000057584177,0.0001502029,0.0005161719,0.00028480758],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015877602,0.0008999713,0.0014223831,0.007344485,0.0006945114,0.000022752463,0.000007653113,1.2693754e-7,0.0000065293466,0.0000066255993,0.003948237,0.98548794],"study_design_scores_gemma":[0.0021765442,0.00042236078,0.0043774806,0.0089479545,0.0028825994,0.000007110193,0.0000060243815,0.000032859436,0.00001098167,0.0000014602475,0.980751,0.00038363016],"about_ca_topic_score_codex":0.00004464367,"about_ca_topic_score_gemma":0.000036188074,"teacher_disagreement_score":0.9851043,"about_ca_system_score_codex":0.000049992424,"about_ca_system_score_gemma":0.0016085288,"threshold_uncertainty_score":0.9998435},"labels":[],"label_agreement":null},{"id":"W2080353817","doi":"10.3390/v7041832","title":"In Ovo Delivery of CpG DNA Reduces Avian Infectious Laryngotracheitis Virus Induced Mortality and Morbidity","year":2015,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency; University of Guelph","keywords":"In ovo; CpG site; Biology; Innate immune system; Virology; Immune system; Virus; TLR9; Immunology; DNA methylation; Embryo; Gene; Gene expression; Genetics","score_opus":0.12341941822568105,"score_gpt":0.36053411419067016,"score_spread":0.23711469596498913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080353817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99557287,0.0002850117,0.0000026840482,0.000043076885,0.00020774704,0.00024504098,0.000047232443,0.000053070078,0.0035432908],"genre_scores_gemma":[0.99927926,0.00019162311,0.000046424935,0.0002879756,0.000087962195,0.000038338036,0.0000066681014,0.00001674801,0.000044987457],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990332,0.00007651124,0.00028897895,0.00023260487,0.00018474368,0.00018397666],"domain_scores_gemma":[0.9993672,0.000048808215,0.000087808694,0.00023476465,0.00008331926,0.00017813538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021505388,0.00015231172,0.00033228545,0.00018288186,0.000042391977,0.000014012207,0.0000380742,0.00012870815,0.00008907375],"category_scores_gemma":[0.00013033816,0.00013497815,0.00004947824,0.00026728932,0.00009352661,0.00025445336,0.000042758424,0.00015989944,0.000033892065],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010605825,0.0012030201,0.94404423,0.0000518538,0.00022885468,0.00020262948,0.0005095065,0.0000038445573,0.04237335,0.00012870938,0.00059970486,0.010548205],"study_design_scores_gemma":[0.0024620323,0.00047698247,0.7722824,0.00008499397,0.00014890189,0.00008283403,0.00010213642,0.000018824287,0.21910588,0.00042181608,0.0046409923,0.00017215776],"about_ca_topic_score_codex":0.027426958,"about_ca_topic_score_gemma":0.0033023704,"teacher_disagreement_score":0.17673254,"about_ca_system_score_codex":0.00009966141,"about_ca_system_score_gemma":0.00014476046,"threshold_uncertainty_score":0.9790495},"labels":[],"label_agreement":null},{"id":"W2082329556","doi":"10.3390/v2112493","title":"Role of HIV Subtype Diversity in the Development of Resistance to Antiviral Drugs","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Human immunodeficiency virus (HIV); Virology; Drug resistance; Biology; Resistance (ecology); Medicine; Genetics","score_opus":0.02075292661349134,"score_gpt":0.2665421247028003,"score_spread":0.24578919808930896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082329556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99031913,0.00004568625,0.0000046376504,0.00042488874,0.000030826846,0.00020130578,0.0000071044806,0.000008755362,0.008957645],"genre_scores_gemma":[0.99401844,0.0000045530096,0.004560598,0.00011429074,0.000012551421,0.0000064687947,0.000004848637,0.0000046774544,0.0012735884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99932605,0.000018700073,0.0001899401,0.00011339027,0.00023603693,0.00011587858],"domain_scores_gemma":[0.9996461,0.00005407079,0.00005439327,0.00017317267,0.000041875126,0.000030355897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022315969,0.000077641,0.00016874548,0.00009805068,0.000055683413,0.0000027354727,0.0001203794,0.000031755644,0.000040399347],"category_scores_gemma":[0.000040419138,0.00005184646,0.000027261085,0.00021370573,0.000040661474,0.000038132737,0.000092591574,0.00007751233,0.000047818412],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029415372,0.0003621798,0.90793157,0.000040763673,0.000052446583,0.000007261134,0.031251445,1.4011634e-7,0.05387773,0.00038573108,0.002367702,0.003428907],"study_design_scores_gemma":[0.00079145125,0.000025050313,0.62250525,0.00008245023,0.000029298932,4.395012e-7,0.0021080635,8.2612274e-7,0.33143863,0.00007258896,0.042858064,0.00008786172],"about_ca_topic_score_codex":0.000024084067,"about_ca_topic_score_gemma":0.0006893691,"teacher_disagreement_score":0.28542626,"about_ca_system_score_codex":0.00001994038,"about_ca_system_score_gemma":0.000107695494,"threshold_uncertainty_score":0.21142372},"labels":[],"label_agreement":null},{"id":"W2087657046","doi":"10.3390/v7041804","title":"A Suggested New Bacteriophage Genus, “Kp34likevirus”, within the Autographivirinae Subfamily of Podoviridae","year":2015,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"European Social Fund; European Regional Development Fund; European Commission; Fundacja na rzecz Nauki Polskiej; Public Health Agency; Folkhälsomyndigheten","keywords":"Podoviridae; Biology; Subfamily; Genome; Phylogenetic tree; Bacteriophage; Klebsiella pneumoniae; Myoviridae; Gene; Genetics; Virulence; Phage therapy; Virology; Microbiology; Escherichia coli","score_opus":0.04129058864173731,"score_gpt":0.26470525004709555,"score_spread":0.22341466140535823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087657046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99376285,0.0002140707,0.00014465369,0.0002956685,0.0005004186,0.00022845797,0.000048375474,0.000076786404,0.004728734],"genre_scores_gemma":[0.99516916,0.000040614043,0.0009164542,0.0013022331,0.000091094575,0.0000109393795,0.0000059667636,0.000028854438,0.0024346602],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987882,0.00010181211,0.00035504796,0.00027503082,0.00022079064,0.00025911626],"domain_scores_gemma":[0.9990176,0.000067398294,0.0002138967,0.00048298773,0.000017312404,0.00020079948],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025475712,0.00019620164,0.000207025,0.00005779076,0.00011379463,0.00006722232,0.00044146224,0.000072499126,0.0017854057],"category_scores_gemma":[0.00007547951,0.00013905582,0.000112382826,0.00044970936,0.00032243854,0.00043674654,0.00024922978,0.00018606354,0.001388622],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009897023,0.0001409511,0.013719187,0.0000062260456,0.000043675664,0.000012931317,0.0012205042,0.000073312716,0.9393301,0.00016561174,0.04017917,0.005009364],"study_design_scores_gemma":[0.0006835179,0.00024081334,0.547638,0.00003940794,0.00007612887,0.000063459476,0.00041991138,0.000041964562,0.07567973,0.00016297138,0.3745961,0.00035803329],"about_ca_topic_score_codex":0.010669695,"about_ca_topic_score_gemma":0.001736541,"teacher_disagreement_score":0.8636504,"about_ca_system_score_codex":0.00006729732,"about_ca_system_score_gemma":0.00006082613,"threshold_uncertainty_score":0.99938893},"labels":[],"label_agreement":null},{"id":"W2088300675","doi":"10.3390/v5071787","title":"Posttranslational Modifications of HIV-1 Integrase by Various Cellular Proteins during Viral Replication","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Manitoba Health Research Council; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"SUMO protein; Integrase; Acetylation; Biology; Viral replication; Ubiquitin; Cell biology; Ku70; Phosphorylation; Replication (statistics); Integrase inhibitor; Computational biology; Human immunodeficiency virus (HIV); Genetics; DNA; Virology; Virus; Gene; DNA repair; Antiretroviral therapy; Viral load","score_opus":0.05975787163440771,"score_gpt":0.3272956705729445,"score_spread":0.2675377989385368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088300675","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00065551006,0.9942403,0.0005377468,0.00028831698,0.000040854262,0.002976325,0.00049640227,0.0000940013,0.00067058724],"genre_scores_gemma":[0.00032267,0.9791636,0.0026285825,0.000022997667,0.000084566775,0.0012539984,0.0032957203,0.00007134067,0.013156534],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99822134,0.00006635939,0.0007457104,0.00047525938,0.00029977266,0.00019156431],"domain_scores_gemma":[0.9986259,0.000063247884,0.0003739487,0.0007093083,0.00011727892,0.000110338086],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010071314,0.00034568718,0.00091104547,0.00026551067,0.0000888759,0.000019462734,0.00014740389,0.00021143047,0.00028352515],"category_scores_gemma":[0.00005740972,0.0002616468,0.0002701986,0.00025409955,0.00006846355,0.00010371528,0.00002706647,0.00022511973,0.00054718653],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000810844,0.0036785414,0.0005420968,0.035899818,0.003989636,0.00004689384,0.0009213039,0.0000021948715,0.018463546,0.003180877,0.031076265,0.9021177],"study_design_scores_gemma":[0.00048672204,0.000037528298,0.000029773571,0.0037788695,0.001260126,0.000023527007,0.00000894558,0.000008312186,0.005230257,0.000037220696,0.9888391,0.00025963504],"about_ca_topic_score_codex":0.000052551724,"about_ca_topic_score_gemma":0.0000016766751,"teacher_disagreement_score":0.95776284,"about_ca_system_score_codex":0.00016265157,"about_ca_system_score_gemma":0.0003647371,"threshold_uncertainty_score":0.99998355},"labels":[],"label_agreement":null},{"id":"W2108869074","doi":"10.3390/v7041975","title":"Evaluating Environmental Persistence and Disinfection of the Ebola Virus Makona Variant","year":2015,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Sodium hypochlorite; Ebola virus; Human decontamination; Ethanol; Hypochlorite; Chemistry; Chlorine; Disinfectant; Microbiology; Outbreak; Medicine; Virology; Biology; Biochemistry; Pathology","score_opus":0.19829725424658057,"score_gpt":0.38945377763430844,"score_spread":0.19115652338772787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108869074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975668,0.00036545325,0.00005863934,0.00011835921,0.00009769704,0.00017904001,0.0000120542245,0.000012066334,0.0015898485],"genre_scores_gemma":[0.9993238,0.000061657214,0.00013141584,0.00015338269,0.00005900494,0.0000073038527,0.0000013184466,0.000007249611,0.00025488363],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993343,0.00006814819,0.00011190814,0.00011675084,0.00026737645,0.000101544516],"domain_scores_gemma":[0.9996858,0.000034685723,0.000040315364,0.00014288016,0.000024017203,0.0000722583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029152443,0.000060299204,0.000096661504,0.000040881274,0.00008974161,0.000012841961,0.000033403045,0.000034056473,0.000078687],"category_scores_gemma":[0.00012299888,0.000037605667,0.000041604406,0.00009367018,0.00014052146,0.00007744322,0.000077513476,0.00010051207,0.000019725825],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013388612,0.00019835026,0.069612324,0.000030642743,0.000047431437,0.000005551188,0.00046815773,0.00003757765,0.90556717,0.00014268211,0.00021430051,0.023541933],"study_design_scores_gemma":[0.0030105729,0.0021491374,0.5962561,0.00018629461,0.00027583045,0.000603268,0.0016521646,0.006846172,0.37838724,0.00033853503,0.010054773,0.00023990295],"about_ca_topic_score_codex":0.0003749247,"about_ca_topic_score_gemma":0.000018211045,"teacher_disagreement_score":0.5271799,"about_ca_system_score_codex":0.00005609559,"about_ca_system_score_gemma":0.000056885234,"threshold_uncertainty_score":0.15335147},"labels":[],"label_agreement":null},{"id":"W2111853899","doi":"10.3390/v6125093","title":"Phocine Distemper Virus: Current Knowledge and Future Directions","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; University of Calgary","funders":"Natural Environment Research Council","keywords":"Morbillivirus; Biology; Outbreak; Marine mammal; Zoology; Arctic; Pandemic; Geography; Virus; Virology; Ecology; Viral disease; Coronavirus disease 2019 (COVID-19); Paramyxoviridae; Disease; Infectious disease (medical specialty); Medicine","score_opus":0.06629782239028421,"score_gpt":0.40612208348331474,"score_spread":0.33982426109303054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111853899","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000527787,0.9966132,0.000002567093,0.000057502017,0.0011986647,0.00052270334,0.00021851083,0.00014171135,0.0011923567],"genre_scores_gemma":[0.000012726821,0.99544907,0.00000991788,0.00026940217,0.0033395719,0.0001478031,0.00017266642,0.000057877078,0.00054099644],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99863166,0.00018461818,0.0003973465,0.00044524483,0.00010122183,0.00023993963],"domain_scores_gemma":[0.9990544,0.00012963025,0.0001478195,0.00039296548,0.00004201237,0.00023319306],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010331635,0.0004256284,0.0015489436,0.00019670284,0.00016401378,0.000018775503,0.00009452465,0.00032493513,0.00032301006],"category_scores_gemma":[0.00007307931,0.00028216167,0.00038188667,0.00021723309,0.00016318029,0.000063206724,0.0000806901,0.00048135573,0.00064217404],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023162163,0.0002389871,0.00007712066,0.015921501,0.00018674052,0.0000068960317,0.000030878997,1.32166e-9,0.0000016161475,0.00023844693,0.01427436,0.9690003],"study_design_scores_gemma":[0.00031509445,0.00013147203,0.00035383512,0.006533657,0.0030730667,0.000060536746,0.000005084255,4.3800048e-7,0.0000013771449,0.000015134305,0.9892494,0.00026089916],"about_ca_topic_score_codex":0.000009891102,"about_ca_topic_score_gemma":0.000023504212,"teacher_disagreement_score":0.97497505,"about_ca_system_score_codex":0.00004699551,"about_ca_system_score_gemma":0.00017419424,"threshold_uncertainty_score":0.99996305},"labels":[],"label_agreement":null},{"id":"W2115969723","doi":"10.3390/v4102014","title":"Brockman, M.A., et al., Human Leukocyte Antigen (HLA) Class I Down-Regulation by Human Immunodeficiency Virus Type 1 Negative Factor (HIV-1 Nef): What Might We Learn From Natural Sequence Variants? Viruses 2012, 4, 1711-1730","year":2012,"lang":"en","type":"erratum","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Human leukocyte antigen; Virology; Human immunodeficiency virus (HIV); Biology; Sequence (biology); Immunology; Antigen; Genetics","score_opus":0.048828615104802575,"score_gpt":0.32377799350356873,"score_spread":0.27494937839876615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115969723","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35958806,0.57155,0.00007837561,0.0016541494,0.035860617,0.0033764527,0.019559393,0.0010753371,0.0072576306],"genre_scores_gemma":[0.50179803,0.0851048,0.00019045803,0.007132799,0.0013997626,0.00041446972,0.0763557,0.0007379597,0.326866],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9932669,0.0014499231,0.0011294961,0.0017205505,0.00050500705,0.0019281363],"domain_scores_gemma":[0.9963621,0.0005137694,0.00095877086,0.0015319114,0.00042692941,0.00020650036],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.00034157606,0.001493503,0.0015170017,0.0005687976,0.0016600247,0.00059374934,0.0014307151,0.0016815634,0.010208758],"category_scores_gemma":[0.00017164757,0.0012703568,0.00044483875,0.00050191855,0.0010552194,0.0028568148,0.00062095997,0.0032540304,0.013934341],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026186922,0.0004218214,0.00037167707,0.000028646333,0.0010031516,0.000024462935,0.00065195054,0.0000016201708,0.4795791,0.00009908861,0.51616395,0.0013926687],"study_design_scores_gemma":[0.0019621968,0.00055598683,0.009790802,0.0005389908,0.00021960765,0.000025257565,0.00027782764,0.0000023980313,0.08168999,0.00021372065,0.90343434,0.0012889148],"about_ca_topic_score_codex":0.008568674,"about_ca_topic_score_gemma":0.0021723106,"teacher_disagreement_score":0.4864452,"about_ca_system_score_codex":0.0005957184,"about_ca_system_score_gemma":0.0006077234,"threshold_uncertainty_score":0.9997814},"labels":[],"label_agreement":null},{"id":"W2117383437","doi":"10.3390/v6093487","title":"Fitness Impaired Drug Resistant HIV-1 Is Not Compromised in Cell-to-Cell Transmission or Establishment of and Reactivation from Latency","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"National Institutes of Health; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"Dolutegravir; Virology; Viral replication; Integrase inhibitor; Drug; Drug resistance; Integrase; Lentivirus; Latency (audio); Cell; Biology; Transmission (telecommunications); Virus latency; Cell culture; Viral load; Virus; Human immunodeficiency virus (HIV); Pharmacology; Viral disease; Genetics; Antiretroviral therapy","score_opus":0.02298425509583537,"score_gpt":0.262141282186693,"score_spread":0.23915702709085765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117383437","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980788,0.00041319156,0.00009964429,0.00038167153,0.00003629726,0.00034954603,0.0002823359,0.000019651343,0.00033886408],"genre_scores_gemma":[0.9982982,0.00014603151,0.00032937882,0.00013352686,0.000006451718,0.000028852408,0.00013690666,0.000010625492,0.0009100061],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999036,0.00018398931,0.00024788876,0.0002610493,0.000054184027,0.00021687342],"domain_scores_gemma":[0.99938923,0.00026817966,0.00006814877,0.00019590493,0.000033044777,0.000045494337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001610102,0.00012614914,0.00024247634,0.00012480377,0.00006704402,0.000011318133,0.00010186069,0.000089614536,0.00040085227],"category_scores_gemma":[0.000028850453,0.000089622255,0.000028809747,0.00011723031,0.00005815695,0.0000810234,0.00003557768,0.0001052945,0.00013273506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029082722,0.0004530496,0.005404055,0.000046221085,0.000025197585,0.000004805357,0.0018472238,0.0000033123451,0.980459,0.000007347241,0.0024677243,0.00637381],"study_design_scores_gemma":[0.004131119,0.0003369844,0.042653933,0.000084352454,0.0000164445,4.6765396e-7,0.00017165561,0.000015730808,0.9325698,0.000038640443,0.019873638,0.00010721049],"about_ca_topic_score_codex":0.0023645007,"about_ca_topic_score_gemma":0.0000982088,"teacher_disagreement_score":0.047889158,"about_ca_system_score_codex":0.000033523233,"about_ca_system_score_gemma":0.000054126936,"threshold_uncertainty_score":0.43890515},"labels":[],"label_agreement":null},{"id":"W2117912433","doi":"10.3390/v3112146","title":"Activation of LTRs from Different Human Endogenous Retrovirus (HERV) Families by the HTLV-1 Tax Protein and T-Cell Activators","year":2011,"lang":"en","type":"article","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Jurkat cells; Transactivation; Long terminal repeat; Tropical spastic paraparesis; Biology; Transfection; Provirus; Expression vector; CREB; Retrovirus; Gene expression; Virology; Molecular biology; Cell biology; Gene; Genetics; Transcription factor; T cell; Recombinant DNA; Genome; Immune system","score_opus":0.04013836545499838,"score_gpt":0.21781519952955242,"score_spread":0.17767683407455404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117912433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927131,0.0037211606,0.000015951257,0.000023727203,0.00017233581,0.0004004772,0.00019756066,0.000055872126,0.0026997973],"genre_scores_gemma":[0.9984952,0.00030797574,0.000015633568,0.0001120153,0.000028322866,0.000057937348,0.000030593965,0.000022830129,0.000929456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998905,0.00018054659,0.00028801744,0.00029439115,0.000056084977,0.0002759862],"domain_scores_gemma":[0.99927104,0.00013462736,0.00024030247,0.00030081824,0.000033745826,0.000019468029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000073171286,0.0002495289,0.00033739986,0.00006565042,0.00041217395,0.000010887089,0.00022902204,0.00019763541,0.00027493198],"category_scores_gemma":[0.000033442233,0.00015034412,0.00007303451,0.00007273228,0.00054893224,0.000098603385,0.00015085723,0.00025926047,0.00004418402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017579645,0.00025259927,0.0114025595,0.000021297683,0.00021928975,7.221321e-7,0.003071287,4.5262972e-8,0.98145694,0.00019421865,0.0012847312,0.0019205267],"study_design_scores_gemma":[0.0007255282,0.00032606747,0.010853394,0.000029887808,0.00005698427,0.0000015872698,0.0017041719,6.547813e-8,0.97865623,0.00025468244,0.007214932,0.00017648707],"about_ca_topic_score_codex":0.009496421,"about_ca_topic_score_gemma":0.00015154081,"teacher_disagreement_score":0.00934488,"about_ca_system_score_codex":0.000025184281,"about_ca_system_score_gemma":0.000015874173,"threshold_uncertainty_score":0.9970994},"labels":[],"label_agreement":null},{"id":"W2121026738","doi":"10.3390/v4091711","title":"Human Leukocyte Antigen (HLA) Class I Down-Regulation by Human Immunodeficiency Virus Type 1 Negative Factor (HIV-1 Nef): What Might We Learn From Natural Sequence Variants?","year":2012,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Viremia; Human leukocyte antigen; Immunology; Biology; Context (archaeology); Immune system; Evasion (ethics); CD8; Virology; Virus; Antigen","score_opus":0.09779440716620771,"score_gpt":0.35753186017828315,"score_spread":0.2597374530120754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121026738","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0095816655,0.9843142,0.000006253556,0.000029176352,0.0012602847,0.0011242207,0.0031205947,0.00016397532,0.00039961564],"genre_scores_gemma":[0.019823635,0.9650147,0.00003275708,0.000062329054,0.00016266364,0.00010913853,0.00977011,0.00010833923,0.004916325],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99558026,0.0011713245,0.000877445,0.0010089462,0.0002092987,0.0011527214],"domain_scores_gemma":[0.9977498,0.0003751219,0.00065911084,0.000952912,0.0001538987,0.0001091317],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021189933,0.0009631587,0.001742886,0.00032906598,0.0009999517,0.0002844529,0.0009000103,0.0009952456,0.0057015372],"category_scores_gemma":[0.00006330557,0.0007213904,0.00046344634,0.00042798408,0.00061017566,0.0011104096,0.00031590322,0.0013318284,0.015486167],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014094531,0.0008391904,0.00014925543,0.0009607008,0.0035361762,0.000051346156,0.0011107149,4.688705e-7,0.30714074,0.00045699786,0.010299608,0.67531383],"study_design_scores_gemma":[0.00079697784,0.0002569647,0.0005346873,0.0021270772,0.0005140506,0.000025646901,0.00008556211,2.514255e-7,0.0065944283,0.00007754009,0.9882156,0.0007711872],"about_ca_topic_score_codex":0.002202227,"about_ca_topic_score_gemma":0.00019458518,"teacher_disagreement_score":0.977916,"about_ca_system_score_codex":0.00048642908,"about_ca_system_score_gemma":0.0003329622,"threshold_uncertainty_score":0.9995237},"labels":[],"label_agreement":null},{"id":"W2124408353","doi":"10.3390/v6114398","title":"Assessing Proteinase K Resistance of Fish Prion Proteins in a Scrapie-Infected Mouse Neuroblastoma Cell Line","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"State Scholarships Foundation; European Commission","keywords":"Scrapie; Neuroblastoma; Prion protein; Biology; Virology; Cell culture; Fish <Actinopterygii>; Proteinase K; Medicine; Pathology; Genetics; Enzyme; Biochemistry; Fishery; Disease","score_opus":0.014608110850730034,"score_gpt":0.2679668883490381,"score_spread":0.25335877749830804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124408353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99652964,0.0008141631,0.0017792193,0.00008470725,0.000029837182,0.00053524465,0.000022784334,0.000026983877,0.00017741817],"genre_scores_gemma":[0.99723446,0.00022351809,0.0017564775,0.0004613005,0.00009461516,0.00007964912,0.000023743978,0.00003121011,0.00009499893],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880016,0.00017962114,0.00029682944,0.00034538793,0.00014382564,0.00023419718],"domain_scores_gemma":[0.99924755,0.000020729582,0.00018817934,0.00038624098,0.000079169804,0.00007812718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024173473,0.0001639554,0.00017959856,0.00008374487,0.000056056346,0.000046804005,0.00017784075,0.000116125004,0.000017895029],"category_scores_gemma":[0.0003622914,0.00016321469,0.000073027164,0.0001770429,0.0000552336,0.000019115845,0.00010497219,0.00010067419,0.0000034376246],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018258228,0.00017411687,0.001278429,0.00015845372,0.000006631902,0.0000033298634,0.000015132966,0.00008159171,0.99390787,0.000025695712,0.00015989428,0.0040062815],"study_design_scores_gemma":[0.0007519845,0.00022642271,0.0032331708,0.00012960956,0.000007866567,8.4089714e-7,0.000011031988,0.00010386954,0.9801805,0.00005069661,0.015118263,0.00018575025],"about_ca_topic_score_codex":0.000054098124,"about_ca_topic_score_gemma":0.00018672145,"teacher_disagreement_score":0.014958369,"about_ca_system_score_codex":0.000011645427,"about_ca_system_score_gemma":0.00007952706,"threshold_uncertainty_score":0.6655702},"labels":[],"label_agreement":null},{"id":"W2124875976","doi":"10.3390/v7052668","title":"Nucleocytoplasmic Shuttling of Influenza A Virus Proteins","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Key Technologies Research and Development Program; Chinese Academy of Sciences; National Natural Science Foundation of China; International Development Research Centre","keywords":"Viral matrix protein; Nucleoprotein; Ribonucleoprotein; Nuclear export signal; Virus; Cell biology; Biology; Influenza A virus; Viral replication; VP40; Viral structural protein; Nuclear transport; Minute virus of mice; Viral life cycle; Viral protein; Virology; Viral entry; Cell nucleus; Genetics; RNA; Parvovirus; Gene; Nucleus","score_opus":0.39750845256081524,"score_gpt":0.49779084002958124,"score_spread":0.100282387468766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124875976","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032419967,0.9926985,0.0000036451054,0.0000065012077,0.000145057,0.0027836286,0.00037715075,0.0001681492,0.003493198],"genre_scores_gemma":[0.00000481951,0.9975968,0.000768822,0.0004071468,0.00036770664,0.00041071154,0.000020032481,0.0001666762,0.0002572689],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960972,0.00022823601,0.0013165658,0.00059037807,0.0010972735,0.00067034713],"domain_scores_gemma":[0.9972946,0.00028393973,0.0006438389,0.0009970594,0.0004632819,0.00031729555],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007815657,0.0006926415,0.003828864,0.0007868172,0.000104130144,0.00003539966,0.0004274084,0.0004828072,0.00017104448],"category_scores_gemma":[0.0015508453,0.0005049789,0.0006763757,0.0006289396,0.00039637304,0.000164186,0.0004746483,0.00093061617,0.0011227698],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026423778,0.0003366382,0.00011397939,0.065974414,0.0015572327,0.00016005336,0.0004020709,0.0000015017413,0.0001811341,0.00016181565,0.004397019,0.9264499],"study_design_scores_gemma":[0.0007994397,0.00038210212,0.00000705768,0.021888291,0.0011929667,0.000056068442,0.000036579666,0.0000016368749,0.0003152687,0.000026018275,0.97491014,0.00038441079],"about_ca_topic_score_codex":0.00031259636,"about_ca_topic_score_gemma":0.00003333439,"teacher_disagreement_score":0.97051316,"about_ca_system_score_codex":0.0004131547,"about_ca_system_score_gemma":0.0016863681,"threshold_uncertainty_score":0.9997402},"labels":[],"label_agreement":null},{"id":"W2127051559","doi":"10.3390/v3040331","title":"Initiation of HIV Reverse Transcription: Is Enzyme Flipping Required?","year":2011,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Reverse transcriptase; Polymerase; DNA polymerase; Förster resonance energy transfer; Biology; Enzyme; Population; Nucleic acid; DNA; Human immunodeficiency virus (HIV); Transcription (linguistics); Molecular biology; Chemistry; Genetics; RNA; Virology; Biochemistry; Physics; Fluorescence; Gene; Medicine","score_opus":0.09784806626800582,"score_gpt":0.2905182853768781,"score_spread":0.1926702191088723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127051559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97184265,0.0045374963,0.0005291315,0.00023882717,0.00039459713,0.0003104302,0.00046235212,0.00009485622,0.021589646],"genre_scores_gemma":[0.9981882,0.00022463067,0.00012574975,0.00027392697,0.000013726515,0.000013987208,0.000058969963,0.0000063407274,0.0010944674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994526,0.000078572375,0.00015554111,0.00012284168,0.000026844016,0.00016360318],"domain_scores_gemma":[0.9997144,0.000027476815,0.000047310692,0.00015356271,0.000041536197,0.000015717524],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008331622,0.000071552175,0.00011691353,0.000075816264,0.000065873974,0.0000026372645,0.00007890695,0.00008347794,0.0054868306],"category_scores_gemma":[0.000023146556,0.00006089886,0.00005144227,0.00007361823,0.00010418948,0.00013919192,0.00001437607,0.00007037664,0.0024914911],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026056517,0.00023413455,0.004783382,0.000025445255,0.00020118193,0.000011259263,0.0040679555,1.7044701e-7,0.9681651,0.0011235683,0.018191792,0.0029354629],"study_design_scores_gemma":[0.000899271,0.00020086067,0.0047540884,0.000031650266,0.00002994148,0.000009776711,0.00023507394,3.2970806e-7,0.914775,0.00015100175,0.07884151,0.00007146183],"about_ca_topic_score_codex":0.00018449767,"about_ca_topic_score_gemma":0.0000144714395,"teacher_disagreement_score":0.06064972,"about_ca_system_score_codex":0.000016247732,"about_ca_system_score_gemma":0.000033839344,"threshold_uncertainty_score":0.9982852},"labels":[],"label_agreement":null},{"id":"W2131067790","doi":"10.3390/v3081485","title":"Direct Inhibition of RNAse T2 Expression by the HTLV-1 Viral Protein Tax","year":2011,"lang":"en","type":"article","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; University Health Network","keywords":"Biology; Chromatin immunoprecipitation; RNase P; Gene expression; Gene; Molecular biology; Promoter; RNA; Virology; Genetics","score_opus":0.025099486495296884,"score_gpt":0.22750928054166666,"score_spread":0.20240979404636977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131067790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872401,0.00557003,0.000021792936,0.000039271355,0.00024059333,0.00024724734,0.00015122164,0.000053025502,0.006436738],"genre_scores_gemma":[0.99601114,0.00010454414,0.000028164035,0.00012338007,0.000023262395,0.00005013864,0.000012668601,0.000010049781,0.003636666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992996,0.00014608214,0.00018624584,0.00015590173,0.0000292282,0.00018296274],"domain_scores_gemma":[0.9996114,0.000041669366,0.00012238283,0.00018598214,0.000029371771,0.000009206726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010813112,0.00012014453,0.0001708238,0.000035336274,0.00020508892,0.0000036752779,0.00011073828,0.000118540614,0.00040883318],"category_scores_gemma":[0.000042365453,0.000066746245,0.00006350974,0.000056365494,0.000327872,0.00007482335,0.00009838013,0.0001314118,0.0002494975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016233466,0.00013925806,0.00053771614,0.000012278774,0.000045785862,0.0000012985488,0.0007007066,5.4370634e-8,0.9735922,0.00017805852,0.023835681,0.0007945955],"study_design_scores_gemma":[0.0003792239,0.00016698832,0.00036837647,0.00005140467,0.00001799364,0.0000024660087,0.00020637544,3.5689062e-8,0.9467355,0.00011794587,0.051866155,0.000087508866],"about_ca_topic_score_codex":0.0006144006,"about_ca_topic_score_gemma":0.000026380027,"teacher_disagreement_score":0.028030474,"about_ca_system_score_codex":0.0000084251005,"about_ca_system_score_gemma":0.000012603026,"threshold_uncertainty_score":0.44764364},"labels":[],"label_agreement":null},{"id":"W2133708140","doi":"10.3390/v2102269","title":"Neuraminidase Inhibitor Susceptibility Testing in Human Influenza Viruses: A Laboratory Surveillance Perspective","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Oseltamivir; Neuraminidase; Zanamivir; Virology; Neuraminidase inhibitor; Biology; Microbiology; Virus; Pandemic; Influenza A virus; Medicine; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty)","score_opus":0.113482481875477,"score_gpt":0.4174028342753288,"score_spread":0.3039203523998518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133708140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541736,0.0005205824,0.0000010689346,0.00012562309,0.00020558784,0.00078548037,0.00012417682,0.0002682988,0.0025518157],"genre_scores_gemma":[0.99507874,0.000011796023,0.00051579,0.0036938554,0.0005073574,0.000101493584,0.0000023474524,0.000059364538,0.000029238987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99709296,0.00022336976,0.00060043775,0.0007373815,0.0006157328,0.00073012407],"domain_scores_gemma":[0.99701893,0.0007911512,0.00015564114,0.0008240042,0.00094330165,0.0002669649],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011543243,0.00036161204,0.0005932337,0.00040189302,0.0002872402,0.00007790863,0.00023842725,0.00020075458,0.00017325584],"category_scores_gemma":[0.0125801815,0.00032293808,0.000087229564,0.0011636474,0.00070708885,0.000377606,0.0002557527,0.0013466241,0.00016183726],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018802303,0.00025099673,0.5572924,0.000065179745,0.000029997002,0.00008636401,0.0006713885,0.0000030046322,0.44070634,0.00022575253,0.00027883434,0.00020174187],"study_design_scores_gemma":[0.002815338,0.0005294679,0.9125119,0.00012648346,0.000020056921,0.000010095109,0.001432143,0.000035654153,0.071994625,0.00020841835,0.009892478,0.00042333064],"about_ca_topic_score_codex":0.002882298,"about_ca_topic_score_gemma":0.0050466694,"teacher_disagreement_score":0.3687117,"about_ca_system_score_codex":0.00030793113,"about_ca_system_score_gemma":0.00039331292,"threshold_uncertainty_score":0.9999223},"labels":[],"label_agreement":null},{"id":"W2135372406","doi":"10.3390/v5030928","title":"Protective Effect of Surfactant Protein D in Pulmonary Vaccinia Virus Infection: Implication of A27 Viral Protein","year":2013,"lang":"en","type":"article","venue":"Viruses","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Nautical Research Society","funders":"","keywords":"Vaccinia; Orthopoxvirus; Virus; Surfactant protein D; Virology; Biology; Viral entry; Microbiology; Innate immune system; Viral replication; Immune system; Immunology; Recombinant DNA; Gene; Biochemistry","score_opus":0.03012959552921878,"score_gpt":0.35470534687595723,"score_spread":0.32457575134673844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135372406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98908085,0.00047047084,0.000023605258,0.00016818858,0.000019533045,0.00990655,0.000017354987,0.000046195608,0.00026727808],"genre_scores_gemma":[0.9968182,0.00002899544,0.00010702813,0.000051235,0.000047494203,0.0028631748,0.000004009471,0.000034173183,0.000045689343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978047,0.00038741616,0.000617256,0.00033915,0.00050048874,0.00035099755],"domain_scores_gemma":[0.9986965,0.00016202663,0.00025952092,0.00045872023,0.00027064717,0.00015259527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074950315,0.00019794078,0.0005071054,0.00038152977,0.000042696574,0.000008696603,0.00011811945,0.00016587165,0.00024381258],"category_scores_gemma":[0.0007104114,0.000156288,0.00008037299,0.00060363725,0.00010572226,0.00029959658,0.000085677304,0.0004245036,0.000120940895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019138008,0.00026083097,0.036071923,0.0023619018,0.00002172357,0.000009667582,0.000036643236,0.0000014979663,0.91632354,0.00004532817,0.000010623963,0.04294252],"study_design_scores_gemma":[0.0009684563,0.0028145097,0.21441886,0.00045009822,0.000007314217,0.0000075979992,0.000005521921,0.00006209414,0.7804109,0.00020851636,0.0005546706,0.00009147319],"about_ca_topic_score_codex":0.012270223,"about_ca_topic_score_gemma":0.00012189308,"teacher_disagreement_score":0.17834693,"about_ca_system_score_codex":0.00020012239,"about_ca_system_score_gemma":0.00031638506,"threshold_uncertainty_score":0.99430716},"labels":[],"label_agreement":null},{"id":"W2139456781","doi":"10.3390/v1030523","title":"Activation of the Antiviral Kinase PKR and Viral Countermeasures","year":2009,"lang":"en","type":"article","venue":"Viruses","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Deutsche Forschungsgemeinschaft","keywords":"Protein kinase R; RNA; RNA silencing; Virology; Biology; EIF-2 kinase; Interferon; Virus; Viral replication; Antiviral protein; RNA virus; Protein kinase A; Kinase; Cell biology; RNA interference; Genetics; Gene; Mitogen-activated protein kinase kinase; Cyclin-dependent kinase 2","score_opus":0.012854157806277024,"score_gpt":0.2595899407635371,"score_spread":0.24673578295726006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139456781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989611,0.00014874245,0.00005187755,0.00012406148,0.000025679929,0.000050167284,0.000007884633,0.000003649439,0.00062684505],"genre_scores_gemma":[0.99881977,0.000017572182,0.000018790053,0.0010040395,0.000043768425,8.546785e-7,0.00000450593,0.000002549786,0.000088168556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973387,0.000021079977,0.000059634724,0.000077049146,0.000060894898,0.000047487352],"domain_scores_gemma":[0.9998083,0.0000024277583,0.00003645013,0.0001142782,0.000022154474,0.000016401053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000029173581,0.0000434846,0.00003739415,0.000010559966,0.000033060747,0.000009035788,0.00004547779,0.000030114063,0.0000038336248],"category_scores_gemma":[0.000039581682,0.000030381672,0.000025485408,0.000024826631,0.000045822337,0.0000043440555,0.000014945939,0.000014435401,6.648542e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006535333,0.000027969068,0.019414693,0.0000028053046,0.000004284396,1.13955615e-7,0.0000108838685,0.0000070391425,0.9763834,0.000300127,0.00072422344,0.003059132],"study_design_scores_gemma":[0.00020480847,0.000051572515,0.35795948,0.000006373066,0.000004679679,4.454185e-7,0.000008801363,0.000018689972,0.63655347,0.00014413625,0.0050083688,0.000039216953],"about_ca_topic_score_codex":0.0000070775327,"about_ca_topic_score_gemma":0.000002300445,"teacher_disagreement_score":0.33982992,"about_ca_system_score_codex":0.0000022340512,"about_ca_system_score_gemma":0.000017915745,"threshold_uncertainty_score":0.123892866},"labels":[],"label_agreement":null},{"id":"W2146274115","doi":"10.3390/v2081734","title":"Core as a Novel Viral Target for Hepatitis C Drugs","year":2010,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Smiths Detection (Canada)","funders":"National Institute of Neurological Disorders and Stroke","keywords":"Virology; Core (optical fiber); Hepatitis C; Viral hepatitis; Medicine; Computer science","score_opus":0.08557459258871673,"score_gpt":0.38989782062996803,"score_spread":0.3043232280412513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146274115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97830915,0.00006491569,0.00050180714,0.0007156161,0.0004740566,0.0008778098,0.00032600792,0.00014717055,0.018583456],"genre_scores_gemma":[0.9773902,0.00007219714,0.014972106,0.0036600519,0.00069860107,0.00024199237,0.000069929294,0.000072783754,0.0028221002],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985639,0.000012022552,0.0002402231,0.00030773427,0.00042996675,0.00044619688],"domain_scores_gemma":[0.99885815,0.00019950277,0.000050379622,0.0004173766,0.00020233222,0.00027224084],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025114266,0.00016229675,0.00028303976,0.00015614407,0.000120911434,0.000041070292,0.00016813504,0.00015482062,0.0016844671],"category_scores_gemma":[0.0011053112,0.00014324511,0.00011668209,0.00016187869,0.00015389043,0.00014943733,0.000070113376,0.00038151612,0.00082931767],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046304785,0.00043917715,0.16325612,0.0001563025,0.000115826755,0.000055776934,0.00045460602,7.232942e-7,0.7411046,0.007308538,0.057396874,0.029248403],"study_design_scores_gemma":[0.002486057,0.0007695486,0.009743942,0.000047296035,0.000035145997,0.00002449829,0.000029797458,0.00071019935,0.11272063,0.0009862006,0.8722171,0.00022957414],"about_ca_topic_score_codex":0.002344968,"about_ca_topic_score_gemma":0.00037396958,"teacher_disagreement_score":0.81482023,"about_ca_system_score_codex":0.000041840412,"about_ca_system_score_gemma":0.0003064653,"threshold_uncertainty_score":0.9999487},"labels":[],"label_agreement":null},{"id":"W2147834015","doi":"10.3390/v4091537","title":"Contributions of Epstein–Barr Nuclear Antigen 1 (EBNA1) to Cell Immortalization and Survival","year":2012,"lang":"en","type":"review","venue":"Viruses","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Antigen; Virology; Biology; Epstein–Barr virus; Genetics; Virus","score_opus":0.04775762614846857,"score_gpt":0.3425641722600025,"score_spread":0.29480654611153395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147834015","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010700498,0.99495155,0.000026312011,0.000029490857,0.00025612672,0.00078825344,0.00047800087,0.000044345023,0.002355864],"genre_scores_gemma":[0.003303907,0.99591064,0.00003309627,0.0002075778,0.00014773925,0.000023904468,0.00016487621,0.000057256686,0.00015097477],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99878436,0.00008025983,0.00042860056,0.00022805487,0.00021078928,0.0002679306],"domain_scores_gemma":[0.99914205,0.000047754424,0.00027154086,0.0002436439,0.00010658444,0.0001884304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018133153,0.00024280002,0.001194038,0.00015446138,0.0000721092,0.000016544953,0.00007948384,0.00026778385,0.00023871951],"category_scores_gemma":[0.00009065283,0.00020036005,0.0002013943,0.00031808068,0.000054630487,0.00007032931,0.00005322785,0.00014303919,0.000098886114],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025134723,0.0012683871,0.0073388703,0.045413516,0.0021122282,0.000032954453,0.0011726721,0.0000037650032,0.0011684217,0.0047258013,0.029988326,0.9065237],"study_design_scores_gemma":[0.0005367582,0.00013805518,0.0001907625,0.0019448481,0.0013438464,0.0000031611546,0.000068264366,6.543328e-7,0.00005137374,0.000007949607,0.995517,0.00019733101],"about_ca_topic_score_codex":0.00028560718,"about_ca_topic_score_gemma":0.000023719245,"teacher_disagreement_score":0.96552867,"about_ca_system_score_codex":0.00008924853,"about_ca_system_score_gemma":0.00017769524,"threshold_uncertainty_score":0.8170446},"labels":[],"label_agreement":null},{"id":"W2147865160","doi":"10.3390/v6114760","title":"Nomenclature- and Database-Compatible Names for the Two Ebola Virus Variants that Emerged in Guinea and the Democratic Republic of the Congo in 2014","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Department of Health and Human Services, State Government of Victoria","keywords":"Ebola virus; Virology; Nomenclature; Democracy; Biology; Geography; Political science; Virus; Zoology; Law; Politics; Taxonomy (biology)","score_opus":0.04256339731133538,"score_gpt":0.33458458309141015,"score_spread":0.29202118578007474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147865160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933993,0.0018221269,0.00037649888,0.0026873474,0.000120596815,0.0010342896,0.000036076613,0.000010155732,0.0005135594],"genre_scores_gemma":[0.9979541,0.0005663862,0.0001064901,0.0010050905,0.000060430426,0.0000953518,0.0000037999637,0.0000119484,0.00019640509],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99898005,0.00023158547,0.00024042443,0.0001848255,0.00016449933,0.00019862685],"domain_scores_gemma":[0.99844253,0.0009725756,0.00008226024,0.00041171035,0.000051072522,0.000039860468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013910347,0.00010842503,0.00026251777,0.00010958064,0.00015840342,0.000042546922,0.00013975835,0.00004304426,0.000049101687],"category_scores_gemma":[0.0007141405,0.000046677207,0.000041001636,0.00026140857,0.00032173595,0.00012802475,0.00013100919,0.00023793532,0.0000017453264],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002873521,0.000650639,0.74595934,0.00063137064,0.0003915755,0.000006172907,0.0041869828,0.000084762796,0.1572417,0.036401603,0.029416125,0.022156205],"study_design_scores_gemma":[0.016793799,0.00045466353,0.8805502,0.00039540007,0.00018309058,0.000050953095,0.00062848045,0.049784765,0.023441242,0.007925667,0.019516792,0.0002749401],"about_ca_topic_score_codex":0.003762752,"about_ca_topic_score_gemma":0.0037419132,"teacher_disagreement_score":0.13459086,"about_ca_system_score_codex":0.000014464361,"about_ca_system_score_gemma":0.000049002334,"threshold_uncertainty_score":0.5688181},"labels":[],"label_agreement":null},{"id":"W2152860087","doi":"10.3390/v6093663","title":"Filovirus RefSeq Entries: Evaluation and Selection of Filovirus Type Variants, Type Sequences, and Names","year":2014,"lang":"en","type":"letter","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"U.S. National Library of Medicine; National Institute of Allergy and Infectious Diseases; Defense Threat Reduction Agency; Department of Human Services; U.S. Department of Homeland Security; Battelle; Science and Technology Directorate; World Health Organization; National Institutes of Health; U.S. Department of Health and Human Services; U.S. Department of Defense","keywords":"RefSeq; Annotation; Ebola virus; Biology; Genome; Sequence (biology); Whole genome sequencing; Sequence analysis; Genetics; Computational biology; Virus; Gene","score_opus":0.08680265358269874,"score_gpt":0.3739130983569193,"score_spread":0.2871104447742206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152860087","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77761585,0.0302746,0.00030832947,0.16429165,0.003210929,0.00630204,0.00053371297,0.00058789866,0.01687496],"genre_scores_gemma":[0.58427614,0.021636412,0.0015899353,0.37124127,0.008179614,0.00015670643,0.0010912705,0.00030368744,0.011524965],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981186,0.00025007603,0.0003489178,0.00042165362,0.0005867967,0.00027395104],"domain_scores_gemma":[0.9986517,0.00020740439,0.00019086633,0.00020944931,0.00066053396,0.00008007663],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00056886836,0.0002492128,0.00047711883,0.00038755525,0.00013381506,0.00006308243,0.00006469351,0.0005571486,0.001240745],"category_scores_gemma":[0.0005901149,0.00020445816,0.000047497324,0.00045083137,0.00022124576,0.00015036493,0.00005501638,0.0007671684,0.00007403026],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004950159,0.00007011781,0.0071523306,0.0010082063,0.00039059122,0.000045224875,0.00012589221,0.000005585766,0.044082373,0.00008395349,0.9254551,0.021085631],"study_design_scores_gemma":[0.00093041465,0.0015361173,0.0061846985,0.0003868419,0.0004977969,0.00025010805,0.000024833844,0.0006904629,0.0075967736,0.00022593194,0.9813841,0.00029194227],"about_ca_topic_score_codex":0.0015346988,"about_ca_topic_score_gemma":0.000047432786,"teacher_disagreement_score":0.20694962,"about_ca_system_score_codex":0.00010401934,"about_ca_system_score_gemma":0.00038315213,"threshold_uncertainty_score":0.99967223},"labels":[],"label_agreement":null},{"id":"W2153943957","doi":"10.3390/v5082019","title":"Viral Subversion of the Nuclear Pore Complex","year":2013,"lang":"en","type":"review","venue":"Viruses","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Nucleoporin; Nuclear pore; Nuclear transport; Cell biology; Biology; Cytoplasm; Viral replication; Nucleus; Capsid; Nuclear export signal; Genome; RNA; Viral life cycle; Virology; Virus; Cell nucleus; Genetics; Gene","score_opus":0.05124851796133513,"score_gpt":0.2985615643890122,"score_spread":0.2473130464276771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153943957","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010934504,0.99671286,0.0000019633521,0.000010009938,0.00034462663,0.0002661753,0.000057309346,0.000008612705,0.0015049792],"genre_scores_gemma":[0.000481967,0.9985206,0.00007890162,0.00022028032,0.00025498314,0.0000034267216,0.00010497146,0.00003719984,0.00029766312],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993976,0.00005993225,0.00017808517,0.00018097476,0.000085175496,0.00009824873],"domain_scores_gemma":[0.99937886,0.0000048000315,0.00018138906,0.0003851798,0.000026617854,0.000023154127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000029490939,0.0001567177,0.0003110805,0.000023285023,0.000056647637,0.000011345421,0.0002512007,0.00023319335,0.00022563034],"category_scores_gemma":[0.00001637237,0.00009246509,0.00027350464,0.000056430195,0.00007777419,0.000001998567,0.00017399073,0.00009985624,0.000063112515],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018843046,0.000031364027,0.000016186246,0.0022348636,0.00019964653,9.1370913e-7,0.000013244533,4.5330276e-7,0.023306256,0.000493825,0.103231914,0.87045246],"study_design_scores_gemma":[0.000050431318,0.00005997772,0.000024620856,0.00024441097,0.000116341864,0.000010756928,0.0000060286084,3.850163e-7,0.00036712937,0.000013580662,0.99900246,0.00010388547],"about_ca_topic_score_codex":0.000024229668,"about_ca_topic_score_gemma":0.0000020264715,"teacher_disagreement_score":0.89577055,"about_ca_system_score_codex":0.00000789092,"about_ca_system_score_gemma":0.000034714696,"threshold_uncertainty_score":0.3770617},"labels":[],"label_agreement":null},{"id":"W2159695933","doi":"10.3390/v7042168","title":"A Phylogeographic Investigation of African Monkeypox","year":2015,"lang":"en","type":"article","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Oak Ridge Institute for Science and Education; Centers for Disease Control and Prevention; University of Victoria; Emory University; U.S. Department of Energy","keywords":"Monkeypox; Clade; Biology; Phylogeography; Phylogenetics; Evolutionary biology; Zoology; Ecology; Genetics","score_opus":0.05997035393320936,"score_gpt":0.28460166438786766,"score_spread":0.22463131045465828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159695933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932417,0.0028840923,0.00001794983,0.00009803819,0.00015302487,0.00009418961,0.000046107183,0.000047413676,0.0034174859],"genre_scores_gemma":[0.9993907,0.000049393762,0.000056523742,0.00021098096,0.0000175525,0.000011816421,0.000019493376,0.0000068156855,0.00023672792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99934167,0.00013273074,0.0001470398,0.00012298877,0.000045201446,0.00021037325],"domain_scores_gemma":[0.99955934,0.00006472805,0.00006192895,0.00017785956,0.000085822045,0.000050305483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001968432,0.00007556321,0.00013819305,0.00015877867,0.00003783738,0.000005420516,0.00015694516,0.00009184653,0.00010577655],"category_scores_gemma":[0.00017906199,0.00006212775,0.000041130254,0.00023757406,0.00034579533,0.000082214836,0.00005516092,0.0001144899,0.00041905895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016565231,0.000042732117,0.065077536,0.000009557662,0.000083183295,0.0000023876282,0.000681438,0.0000017686043,0.91899574,0.0013600666,0.010035912,0.0035440421],"study_design_scores_gemma":[0.0010277923,0.0003200211,0.03271802,0.000017865008,0.000017074017,0.000009967963,0.00043235553,0.0000018746612,0.86284924,0.0028549936,0.09962169,0.00012913125],"about_ca_topic_score_codex":0.00095558347,"about_ca_topic_score_gemma":0.00005586004,"teacher_disagreement_score":0.08958578,"about_ca_system_score_codex":0.000010304503,"about_ca_system_score_gemma":0.00009683553,"threshold_uncertainty_score":0.5386295},"labels":[],"label_agreement":null},{"id":"W2160794924","doi":"10.3390/v4050708","title":"Pharmacological Inhibition of Feline Immunodeficiency Virus (FIV)","year":2012,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; Canada Research Chairs","keywords":"Feline immunodeficiency virus; Virology; Virus; Biology; Viral replication; Viral entry; CATS; Lentivirus; Reverse transcriptase; Viral disease; Gene; RNA; Medicine; Genetics","score_opus":0.1352595314492094,"score_gpt":0.3948193315274811,"score_spread":0.25955980007827173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160794924","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047143176,0.9962121,0.000007858866,0.000004836433,0.0004522708,0.00059576624,0.0013236415,0.00006053575,0.0008715231],"genre_scores_gemma":[0.0013613446,0.99674726,0.000020398355,0.00003371931,0.00007030314,0.0001576336,0.0011282284,0.000027530401,0.00045358916],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99799114,0.00050687225,0.0006092971,0.00030279663,0.00006514443,0.0005247445],"domain_scores_gemma":[0.9990611,0.00027960291,0.0003007672,0.000277076,0.000042159547,0.000039257255],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00029155795,0.00035293744,0.0011972161,0.00021986576,0.00012269602,0.0000085341435,0.00023281283,0.0004955712,0.00434295],"category_scores_gemma":[0.000052875523,0.00023001511,0.00039187176,0.00023467673,0.00030351547,0.00008479135,0.00017408913,0.00049836066,0.010165955],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049497816,0.0010550561,0.000010495111,0.0016139618,0.0007314886,0.000017937957,0.000028543056,5.5086904e-8,0.019314982,0.00014456583,0.0022980229,0.9747354],"study_design_scores_gemma":[0.0004712264,0.000221875,0.000009206469,0.00080682157,0.0009838201,0.00005458002,0.0000060815782,1.1955727e-8,0.008151597,0.0000066674793,0.98909074,0.0001973875],"about_ca_topic_score_codex":0.00011206979,"about_ca_topic_score_gemma":0.000004113922,"teacher_disagreement_score":0.9867927,"about_ca_system_score_codex":0.00008383848,"about_ca_system_score_gemma":0.00015307628,"threshold_uncertainty_score":0.9965672},"labels":[],"label_agreement":null},{"id":"W2165275320","doi":"10.3390/v5010295","title":"Innate and Adaptive Immune Response to Pneumonia Virus of Mice in a Resistant and a Susceptible Mouse Strain","year":2013,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Immune system; Biology; Virus; Immunology; Innate immune system; Viral replication; Chemokine; Virology; Acquired immune system; Bronchiolitis; Antibody","score_opus":0.04669989091829931,"score_gpt":0.3382321061578663,"score_spread":0.291532215239567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165275320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979882,0.00059917266,0.0000089126415,0.00040120017,0.00001265847,0.00073729595,0.00004156414,0.00002513712,0.00018584279],"genre_scores_gemma":[0.9984553,0.00010077065,0.00042123717,0.00034756216,0.00001175507,0.00008571799,7.375398e-7,0.00002165357,0.00055525266],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99874556,0.00024595344,0.00032012144,0.00024713637,0.00019819838,0.00024305501],"domain_scores_gemma":[0.99921215,0.00019970995,0.000052844218,0.00024804941,0.00012981865,0.0001574088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000588551,0.00012675769,0.000286966,0.0005596165,0.00004665445,0.00003402535,0.000061730716,0.00007256296,0.00009488874],"category_scores_gemma":[0.000601902,0.00010957385,0.000022648283,0.0004788782,0.00017684043,0.0001918707,0.000108069136,0.00019557354,0.000049224025],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00365662,0.00011187922,0.0056521194,0.000040541076,0.000024163854,0.000026730007,0.0005006118,0.0000031159113,0.98824114,0.00007146079,0.00011950982,0.0015521236],"study_design_scores_gemma":[0.001611959,0.0035539197,0.49703205,0.00017751797,0.000013830563,0.00001535381,0.0007972405,0.00007334431,0.49435842,0.00008692944,0.0021202306,0.00015922384],"about_ca_topic_score_codex":0.004747986,"about_ca_topic_score_gemma":0.00069235265,"teacher_disagreement_score":0.49388272,"about_ca_system_score_codex":0.000068675836,"about_ca_system_score_gemma":0.000105207575,"threshold_uncertainty_score":0.7177566},"labels":[],"label_agreement":null},{"id":"W2168024721","doi":"10.3390/v6062428","title":"Efficient Strategy to Generate a Vectored Duck Enteritis Virus Delivering Envelope of Duck Tembusu Virus","year":2014,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Virology; Immunogenicity; Medicine; Virus; Biology; Antibody; Genetics","score_opus":0.020905765942216995,"score_gpt":0.27299179675063845,"score_spread":0.25208603080842146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168024721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99645376,0.0012200344,0.0005838783,0.00008880392,0.00028505723,0.00050621975,0.00013690522,0.000094252726,0.00063108624],"genre_scores_gemma":[0.99706286,0.000106155756,0.00032469395,0.0018305761,0.00038459658,0.00006575037,0.000015037159,0.000049585793,0.00016073295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981811,0.000081119804,0.00047751277,0.00046104184,0.00036649234,0.00043273772],"domain_scores_gemma":[0.998764,0.00005390248,0.00012611464,0.0005167812,0.00016569058,0.00037353663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001724186,0.00027173487,0.0005286443,0.00016443367,0.00008599748,0.00004840174,0.00018844461,0.00008168053,0.00059383415],"category_scores_gemma":[0.00014372713,0.00024349167,0.00016961408,0.0002455468,0.0000576866,0.000045835543,0.00009719751,0.00011032393,0.0002422085],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00085822376,0.00043010284,0.0029417195,0.0001441531,0.00013420921,0.00006107862,0.00026842547,0.0025197975,0.9673138,0.0003324215,0.0008497889,0.02414624],"study_design_scores_gemma":[0.0076489304,0.0038249346,0.2072007,0.0008104425,0.00069784693,0.000067151275,0.0003303166,0.011000858,0.7277303,0.00004644177,0.03948894,0.0011531631],"about_ca_topic_score_codex":0.0018255655,"about_ca_topic_score_gemma":0.0002439353,"teacher_disagreement_score":0.23958357,"about_ca_system_score_codex":0.000060708902,"about_ca_system_score_gemma":0.00011604611,"threshold_uncertainty_score":0.9929302},"labels":[],"label_agreement":null},{"id":"W2168976188","doi":"10.3390/v6062268","title":"The Tumor-Associated Marker, PVRL4 (Nectin-4), Is the Epithelial Receptor for Morbilliviruses","year":2014,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research; Nova Scotia Health Research Foundation","keywords":"Morbillivirus; Measles virus; Canine distemper; Oncolytic virus; Virology; Virus; Biology; Paramyxoviridae; Measles; Vaccination; Viral disease","score_opus":0.07347566276635344,"score_gpt":0.3758458901530063,"score_spread":0.30237022738665287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168976188","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031036764,0.9931533,0.000009540142,0.00076209306,0.0012313225,0.0026166625,0.0012543743,0.00017679355,0.000485559],"genre_scores_gemma":[0.000083144456,0.9863409,0.000026136482,0.007988955,0.0013580513,0.0010579231,0.00012674626,0.00015164587,0.0028665],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967144,0.0007451825,0.00085938344,0.00061777304,0.000363815,0.00069942704],"domain_scores_gemma":[0.99322647,0.00474362,0.0006997758,0.0010020076,0.00015101454,0.00017709202],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011683886,0.0006713981,0.0018485247,0.00010475188,0.0010092699,0.000097571225,0.0006786,0.00045254672,0.00040062555],"category_scores_gemma":[0.0040367516,0.00030771163,0.001411937,0.00030839944,0.00051788817,0.00007000747,0.00014917413,0.00069555885,0.00097242],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006495288,0.00033190535,0.00027080515,0.0054282574,0.002220211,0.000011404833,0.0000629536,9.1943875e-8,0.000018537346,0.00060671626,0.3360068,0.6543928],"study_design_scores_gemma":[0.00060693466,0.00043223784,0.00017630761,0.0035864327,0.0034113487,0.000020882439,0.000022259634,0.0000043555515,0.000031636115,0.00023846747,0.99110997,0.0003591438],"about_ca_topic_score_codex":0.00007598512,"about_ca_topic_score_gemma":0.000052864933,"teacher_disagreement_score":0.6551032,"about_ca_system_score_codex":0.000113030816,"about_ca_system_score_gemma":0.00050580915,"threshold_uncertainty_score":0.9999375},"labels":[],"label_agreement":null},{"id":"W2183208539","doi":"10.3390/v7122936","title":"Potential for Improving Potency and Specificity of Reovirus Oncolysis with Next-Generation Reovirus Variants","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta","funders":"","keywords":"Potency; Virology; Reoviridae; Computational biology; Biology; Chemistry; Virus; In vitro; Biochemistry; Rotavirus","score_opus":0.21319589522824622,"score_gpt":0.3987053825217882,"score_spread":0.185509487293542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2183208539","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001703728,0.9933221,0.0022761982,0.000049137794,0.00019578557,0.0017600212,0.00048467217,0.000037463116,0.00017092453],"genre_scores_gemma":[0.0008327381,0.9904474,0.0068500964,0.0001347898,0.0009891685,0.00016671691,0.00027500995,0.000073022136,0.0002310443],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99731404,0.00031945182,0.0008796309,0.0006177553,0.0003598774,0.0005092382],"domain_scores_gemma":[0.99829626,0.00006681611,0.0005456685,0.0004506984,0.00031490184,0.00032568263],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008862923,0.00039649045,0.0023505657,0.0003272032,0.00009746961,0.00004576195,0.00016394231,0.00032599337,0.000049195183],"category_scores_gemma":[0.0007231083,0.0002776139,0.00028598477,0.0002248149,0.00020473229,0.00020983204,0.00011005442,0.00035290743,0.000012296901],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006003875,0.00012718602,0.00004574231,0.0077844993,0.00029084762,0.00008117908,0.00001321267,0.0000014901008,0.0022283194,0.000033253757,0.0016752522,0.9871186],"study_design_scores_gemma":[0.002451858,0.0051172036,0.00009094614,0.00463969,0.0027177643,0.00067255844,0.00004615247,0.00036345888,0.00010931371,0.000048364735,0.9832818,0.00046089466],"about_ca_topic_score_codex":0.00068216963,"about_ca_topic_score_gemma":0.00011165869,"teacher_disagreement_score":0.98665774,"about_ca_system_score_codex":0.00015659169,"about_ca_system_score_gemma":0.0006418229,"threshold_uncertainty_score":0.9999676},"labels":[],"label_agreement":null},{"id":"W2190952522","doi":"10.3390/v7122952","title":"Roles of HTLV-1 basic Zip Factor (HBZ) in Viral Chronicity and Leukemic Transformation. Potential New Therapeutic Approaches to Prevent and Treat HTLV-1-Related Diseases","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Retrovirus; Transactivation; Leukemia; Human T-lymphotropic virus 1; Virology; Pathogenesis; Immunology; T-cell leukemia; Transformation (genetics); Biology; Cancer; Cancer research; Virus; Medicine; Transcription factor; Genetics; Gene","score_opus":0.0937550154248625,"score_gpt":0.28511288644226956,"score_spread":0.19135787101740706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2190952522","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.037012402,0.9611492,0.000014679445,0.000029150047,0.00018130131,0.0009541383,0.0005218656,0.00004413696,0.00009308746],"genre_scores_gemma":[0.062011205,0.9371368,0.000006939033,0.000030929506,0.000041141488,0.00006135152,0.00012877649,0.000034783712,0.00054801855],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981007,0.00033307626,0.0006939462,0.0004429041,0.00006532833,0.000364073],"domain_scores_gemma":[0.99933153,0.00011092968,0.00024252299,0.00022167082,0.000020248275,0.00007312131],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011460059,0.0005109653,0.0015867972,0.00029130353,0.00011209129,0.000022063594,0.00020135092,0.00047563776,0.000067866546],"category_scores_gemma":[0.000019472294,0.00035000013,0.00021927572,0.00017174297,0.00030280743,0.0001437243,0.00012324975,0.00034333917,0.000045133274],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015999046,0.0003055525,0.00022812322,0.003872705,0.0008845651,0.0000032761534,0.0022525939,0.000008367798,0.0012668363,0.00023152308,0.0002900911,0.9904964],"study_design_scores_gemma":[0.004879226,0.0012317001,0.0025372026,0.0066359635,0.004601237,0.00013916117,0.00077422115,0.0000070907154,0.0023296273,0.00068043073,0.9744596,0.001724525],"about_ca_topic_score_codex":0.00042959012,"about_ca_topic_score_gemma":0.00015546852,"teacher_disagreement_score":0.98877186,"about_ca_system_score_codex":0.0001279437,"about_ca_system_score_gemma":0.000335875,"threshold_uncertainty_score":0.9998952},"labels":[],"label_agreement":null},{"id":"W2191354043","doi":"10.3390/v7122959","title":"HIV-1-Induced Small T Cell Syncytia Can Transfer Virus Particles to Target Cells through Transient Contacts","year":2015,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Institute of General Medical Sciences; National Institute on Drug Abuse","keywords":"Syncytium; Cell fusion; Cell biology; Biology; Giant cell; Multinucleate; Cell; Cell culture; Fusion mechanism; Extracellular; Virus; Virology; Lipid bilayer fusion; Genetics","score_opus":0.06931072075233978,"score_gpt":0.278243715354675,"score_spread":0.20893299460233522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2191354043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99288636,0.0016766608,0.0006414047,0.00057654333,0.000411108,0.00062527746,0.00081675895,0.00011851339,0.002247361],"genre_scores_gemma":[0.99716276,0.000063855354,0.0003882736,0.0012440822,0.00003355194,0.00010258396,0.0000983679,0.000032711883,0.0008738282],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822295,0.00024757447,0.0002787711,0.00040980097,0.000083099614,0.0007577779],"domain_scores_gemma":[0.9992324,0.000099881094,0.000023288841,0.00034387325,0.00008345763,0.00021709954],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015641442,0.0002682738,0.0003363065,0.00007776524,0.00013989901,0.000033402546,0.00024624815,0.0001692279,0.00053849217],"category_scores_gemma":[0.000027213642,0.00021579306,0.00010031989,0.00015842717,0.000083734674,0.00009920659,0.000036814483,0.00021261163,0.009027893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047841415,0.00059879385,0.00061844365,0.000013767019,0.0001571344,0.00012416286,0.004636132,0.00003284,0.9823082,0.0001245846,0.010100274,0.0008072517],"study_design_scores_gemma":[0.0023124712,0.0007300914,0.0004656619,0.000013926214,0.00004272823,0.000012090467,0.00042350462,6.524288e-7,0.80464333,0.000044875243,0.1911033,0.00020734545],"about_ca_topic_score_codex":0.00242628,"about_ca_topic_score_gemma":0.001201362,"teacher_disagreement_score":0.18100302,"about_ca_system_score_codex":0.00010546088,"about_ca_system_score_gemma":0.00025532223,"threshold_uncertainty_score":0.9917437},"labels":[],"label_agreement":null},{"id":"W2192594451","doi":"10.3390/v7122953","title":"Dendritic Cells in Oncolytic Virus-Based Anti-Cancer Therapy","year":2015,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research; Terry Fox Research Institute; Nova Scotia Health Research Foundation","keywords":"Oncolytic virus; Tumor microenvironment; Acquired immune system; Immune system; Innate immune system; Dendritic cell; Antigen presentation; Context (archaeology); Immunology; Immunity; Biology; Antigen-presenting cell; Cancer; Cancer research; T cell","score_opus":0.11330378349501825,"score_gpt":0.41665494758616467,"score_spread":0.30335116409114643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2192594451","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009158373,0.98863703,0.0000060871384,0.000010125121,0.00031361144,0.0011951125,0.00045778946,0.000032612243,0.00018926802],"genre_scores_gemma":[0.00023672741,0.9969009,0.000044138826,0.0007395235,0.0005417764,0.00058015645,0.00023453473,0.00020793063,0.0005143001],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965156,0.00063335994,0.00069049705,0.0009357643,0.0004892372,0.00073554966],"domain_scores_gemma":[0.99824584,0.00007456933,0.00024528682,0.0010609004,0.00013964628,0.00023376843],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00071459543,0.0006855517,0.0013829978,0.00038416096,0.000064905034,0.000085136744,0.0009266934,0.0007057832,0.0002695166],"category_scores_gemma":[0.000049573882,0.0005883352,0.00045597923,0.00049795874,0.00018918717,0.0000072214293,0.00014538376,0.00048797927,0.00034041435],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075327465,0.000588604,0.00007970375,0.0026727433,0.00036013697,0.0000570339,0.000015490792,0.000102468155,0.10043169,0.0000030557485,0.00611058,0.88882524],"study_design_scores_gemma":[0.0009218651,0.0010983624,0.0000020288298,0.0010470311,0.000054921813,0.0000030375045,0.0000032860687,0.000005442425,0.10144922,0.0000048036627,0.8948112,0.0005987748],"about_ca_topic_score_codex":0.00014146477,"about_ca_topic_score_gemma":0.0005529819,"teacher_disagreement_score":0.88870066,"about_ca_system_score_codex":0.00020351358,"about_ca_system_score_gemma":0.0023704814,"threshold_uncertainty_score":0.9996568},"labels":[],"label_agreement":null},{"id":"W2212607938","doi":"10.3390/v7122964","title":"A Flagellar Glycan-Specific Protein Encoded by Campylobacter Phages Inhibits Host Cell Growth","year":2015,"lang":"en","type":"article","venue":"Viruses","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Alberta Glycomics Centre; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates","keywords":"Campylobacter jejuni; Campylobacter; Lytic cycle; Biology; Effector; Microbiology; Flagellum; Bacteria; Glycan; Phage display; Gene; Biochemistry; Virology; Genetics; Glycoprotein; Virus; Peptide","score_opus":0.04313264832560412,"score_gpt":0.2262816100047502,"score_spread":0.18314896167914607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2212607938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99243706,0.002166589,0.000007720336,0.0007406244,0.00021183869,0.00035869484,0.00015206863,0.00017742437,0.0037479855],"genre_scores_gemma":[0.9961098,0.00022333901,0.00010446112,0.0017061597,0.0004813579,0.000050990144,0.000090061134,0.0000040322366,0.0012297857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979724,0.00029656573,0.00036751005,0.00054418866,0.00026265773,0.00055665744],"domain_scores_gemma":[0.99908715,0.00018653586,0.00016134318,0.000120304525,0.00012055464,0.0003241133],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039489486,0.00029920472,0.00035716654,0.000019154526,0.0001389535,0.000091731,0.00040774615,0.00022425593,0.0004253749],"category_scores_gemma":[0.00010155517,0.00012044756,0.00010689587,0.00034235176,0.00012820079,0.00023272808,0.00012490484,0.00018542813,0.00077964575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007219481,0.00012489087,0.0073071015,0.000005207812,0.000008391738,0.000010708847,0.000087392786,1.8386619e-7,0.9431618,0.00006825627,0.04761227,0.0015416102],"study_design_scores_gemma":[0.0003390254,0.00035872724,0.0050965953,0.000016854212,0.000008774367,0.000008827725,0.00025571987,0.0000019229637,0.6624817,0.0003895227,0.33068734,0.00035495407],"about_ca_topic_score_codex":0.000862956,"about_ca_topic_score_gemma":0.00014037392,"teacher_disagreement_score":0.28307506,"about_ca_system_score_codex":0.000047843176,"about_ca_system_score_gemma":0.000017301974,"threshold_uncertainty_score":0.9999984},"labels":[],"label_agreement":null},{"id":"W2237832851","doi":"10.3390/v8010017","title":"Development of an Assay for the Identification of Receptor Binding Proteins from Bacteriophages","year":2016,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"","keywords":"Bacteriophage; Phage display; Biology; Computational biology; Escherichia coli; Phage typing; Phagemid; Genome; Bacteria; Genetics; Gene; Antibody","score_opus":0.03037223070280881,"score_gpt":0.2762990031666467,"score_spread":0.24592677246383787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2237832851","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99403596,0.000009391435,0.0051574563,0.00007381596,0.00016536437,0.00026136654,0.00025750115,0.000010394611,0.000028779043],"genre_scores_gemma":[0.98816514,0.000012703908,0.011317194,0.00002349603,0.000028431616,0.00006062651,0.000011808503,0.000008838898,0.0003717757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99941885,0.000023717279,0.0002747146,0.00013000309,0.00007015296,0.000082561615],"domain_scores_gemma":[0.9994845,0.000109784945,0.00020320406,0.00017131888,0.000010755839,0.00002046021],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002021958,0.000058850746,0.00007478595,0.000016727103,0.00009174426,0.000014197578,0.00016735971,0.000027061371,0.0016129363],"category_scores_gemma":[0.0000493317,0.000033155957,0.00003065382,0.000051386625,0.00007735551,0.00028937994,0.00005095321,0.000018409139,0.00014518877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001974275,0.00004664814,0.00023998554,0.0000030214458,0.0000131666775,2.1531923e-8,0.00038344556,7.743274e-7,0.93371993,0.0000056206018,0.00010993433,0.06545772],"study_design_scores_gemma":[0.000098531964,0.000018009863,0.056681372,0.000023915423,0.000008199034,1.5116935e-7,0.000088653454,0.000004689225,0.9028392,0.000008160734,0.0401835,0.000045630324],"about_ca_topic_score_codex":0.0002106588,"about_ca_topic_score_gemma":0.00018044355,"teacher_disagreement_score":0.06541209,"about_ca_system_score_codex":0.000044491182,"about_ca_system_score_gemma":0.0000101617725,"threshold_uncertainty_score":0.9992997},"labels":[],"label_agreement":null},{"id":"W2257432505","doi":"10.3390/v8010025","title":"Temporal Regulation of Distinct Internal Ribosome Entry Sites of the Dicistroviridae Cricket Paralysis Virus","year":2016,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Cricket; Internal ribosome entry site; Paralysis; Biology; Virology; Ribosome; Zoology; Genetics; Medicine; RNA; Gene","score_opus":0.04499738389594424,"score_gpt":0.27053334257229644,"score_spread":0.2255359586763522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2257432505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99767685,0.00019524849,0.000004717239,0.00047151058,0.000044346205,0.000095375726,0.0011470674,0.000018021476,0.0003468927],"genre_scores_gemma":[0.9994171,0.00011617778,0.000013760706,0.000044061093,0.000088785484,0.0000066143107,0.000011115351,6.0929267e-7,0.00030175582],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988696,0.00011936715,0.00027269244,0.0001655486,0.00038979814,0.0001830092],"domain_scores_gemma":[0.99906963,0.00051104557,0.00020893266,0.000087705455,0.00008297565,0.000039738283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017957498,0.000104015686,0.00020255455,0.000016443722,0.00009994767,0.000013073757,0.0003467319,0.00004283047,0.00038146396],"category_scores_gemma":[0.0003909129,0.00002516535,0.00012447791,0.0002509851,0.00030525154,0.00013261105,0.00020679565,0.000057776477,0.000020057058],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063476466,0.000043208445,0.24961749,0.000005243229,0.000027773925,4.5675685e-7,0.000015554977,3.4034804e-7,0.74372274,0.000071241295,0.0014477225,0.0049847746],"study_design_scores_gemma":[0.00007404263,0.000073631396,0.60270035,0.000046557405,0.00001177498,7.653616e-7,0.000023665387,0.0000038591315,0.39192522,0.0002959418,0.0047910474,0.000053111606],"about_ca_topic_score_codex":0.001436603,"about_ca_topic_score_gemma":0.0012362455,"teacher_disagreement_score":0.3530829,"about_ca_system_score_codex":0.000019808596,"about_ca_system_score_gemma":0.00000824732,"threshold_uncertainty_score":0.4176763},"labels":[],"label_agreement":null},{"id":"W2288355178","doi":"10.3390/v8020045","title":"Big Data Offers Novel Insights for Oncolytic Virus Immunotherapy","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario","funders":"Terry Fox Research Institute; Canada Foundation for Innovation; Ontario Institute for Cancer Research","keywords":"Oncolytic virus; Immunotherapy; Virus; Computational biology; Virology; Biology; Data science; Medicine; Computer science; Immunology; Immune system","score_opus":0.22084314776685676,"score_gpt":0.4201771659172877,"score_spread":0.19933401815043095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288355178","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013761553,0.99253285,0.001138887,0.00001890916,0.000684325,0.0016955633,0.00357424,0.00003714177,0.00018048877],"genre_scores_gemma":[0.000011606789,0.99336654,0.00018364767,0.00055761007,0.0021419965,0.0004487638,0.0018092906,0.00026295843,0.001217559],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969798,0.0001896884,0.00064955355,0.0012326541,0.00032434988,0.00062399975],"domain_scores_gemma":[0.99606705,0.00019960062,0.0003416183,0.0030793562,0.00015398937,0.00015841704],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00046183134,0.00067165296,0.0011754116,0.00023759448,0.00016869005,0.00008709687,0.0023256664,0.0006506278,0.00006309544],"category_scores_gemma":[0.00022056082,0.00047179838,0.00041448415,0.00026578602,0.00021146769,0.000011105387,0.0005761044,0.00022481791,0.00020618254],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066964544,0.00014137496,2.2776989e-7,0.001143825,0.0007568727,0.0000022494787,0.0000060784446,1.8914541e-7,0.097872086,0.000015349466,0.005718386,0.8936737],"study_design_scores_gemma":[0.0010756396,0.0014983575,1.9681346e-7,0.00149566,0.00013844405,0.000010495761,0.0000026313514,0.0000015390939,0.019883461,0.000019219377,0.97524035,0.00063400244],"about_ca_topic_score_codex":0.000031262898,"about_ca_topic_score_gemma":0.00021626621,"teacher_disagreement_score":0.96952194,"about_ca_system_score_codex":0.000091829876,"about_ca_system_score_gemma":0.0015170873,"threshold_uncertainty_score":0.9997734},"labels":[],"label_agreement":null},{"id":"W2291384654","doi":"10.3390/v8030067","title":"Remodeling of the Host Cell Plasma Membrane by HIV-1 Nef and Vpu: A Strategy to Ensure Viral Fitness and Persistence","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Immune system; Viral replication; Homing (biology); Membrane protein; Cell; Cell membrane; Virus; Viral entry; Viral envelope; Virology; Intracellular; Membrane; Immunology; Genetics","score_opus":0.05185388920955003,"score_gpt":0.2977846293136427,"score_spread":0.24593074010409266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2291384654","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016316535,0.98028326,0.0000029597638,0.000041079235,0.00008419871,0.0005220014,0.0022670638,0.0000127368885,0.00047013798],"genre_scores_gemma":[0.010633964,0.9868467,0.000016792936,0.00003096877,0.000014991606,0.000037144047,0.00005659777,0.000022201133,0.0023406802],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99872196,0.0002709289,0.00027303054,0.00036970034,0.00004947312,0.00031490848],"domain_scores_gemma":[0.9992077,0.00026879425,0.0001288636,0.0003069667,0.000038127666,0.00004959175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001232581,0.00027831414,0.0007231261,0.00007406706,0.00015266013,0.000020600315,0.00024792555,0.00026961445,0.00010176705],"category_scores_gemma":[0.000045954817,0.00014471092,0.00012382875,0.000084299594,0.0002717011,0.000048694073,0.00018910125,0.00023798202,0.00023742049],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020503064,0.00023470739,0.00012914058,0.00780081,0.000825632,0.000019020334,0.000381384,8.140439e-7,0.087179564,0.0001302098,0.0048543927,0.8982393],"study_design_scores_gemma":[0.00065585115,0.00028955878,0.000015286843,0.003200201,0.00024559017,0.00007063714,0.00006769201,2.6715094e-7,0.00614429,0.000004398507,0.9890846,0.00022162111],"about_ca_topic_score_codex":0.000081508864,"about_ca_topic_score_gemma":0.000019197525,"teacher_disagreement_score":0.9842302,"about_ca_system_score_codex":0.000025382169,"about_ca_system_score_gemma":0.00014365645,"threshold_uncertainty_score":0.590114},"labels":[],"label_agreement":null},{"id":"W2299200382","doi":"10.3390/v8030081","title":"Alphaherpesvirus Subversion of Stress-Induced Translational Arrest","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation","keywords":"Stress granule; Herpes simplex virus; Virology; Biology; Endoribonuclease; Cell biology; Translational regulation; Translation (biology); Virus; Messenger RNA; RNA; Genetics; Gene","score_opus":0.09406150564625457,"score_gpt":0.3855979335303431,"score_spread":0.2915364278840885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2299200382","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003921417,0.9938591,0.000021616272,0.000022812103,0.00044651542,0.0006866942,0.0007723624,0.0000697883,0.0037289502],"genre_scores_gemma":[0.0007237472,0.99826103,0.00009972757,0.00003899748,0.0002908545,0.000058643556,0.00012639796,0.00006546301,0.0003351484],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99840534,0.00009081606,0.00059736235,0.00035657373,0.00031749927,0.00023240395],"domain_scores_gemma":[0.99881375,0.00023206635,0.00030170355,0.00043386055,0.000077400706,0.00014121277],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009264531,0.00038091108,0.0013413513,0.00031518552,0.0000740036,0.000010189837,0.00010544267,0.0003659503,0.0013656175],"category_scores_gemma":[0.00004150653,0.00023904213,0.0005802543,0.000272871,0.00007196408,0.00010218381,0.000025581992,0.00020768518,0.0007342418],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026285885,0.00033552325,0.00018576575,0.0034944683,0.0006361183,0.000033814416,0.000010623932,4.6383008e-8,0.000020564417,0.00018572583,0.00023812789,0.99483293],"study_design_scores_gemma":[0.0007268171,0.00012770524,0.00006417476,0.016618764,0.0012976694,0.000022676066,0.0000023250984,2.126243e-7,0.00043744012,0.000027109365,0.980476,0.00019911276],"about_ca_topic_score_codex":0.00011474864,"about_ca_topic_score_gemma":0.000016434074,"teacher_disagreement_score":0.9946338,"about_ca_system_score_codex":0.00009644653,"about_ca_system_score_gemma":0.00046159115,"threshold_uncertainty_score":0.99954724},"labels":[],"label_agreement":null},{"id":"W2390096483","doi":"10.3390/v8050124","title":"Respiratory Syncytial Virus and Cellular Stress Responses: Impact on Replication and Physiopathology","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Université de Montréal; Mitacs","keywords":"Endoplasmic reticulum; Unfolded protein response; Biology; Viral replication; Immunology; Oxidative stress; Stress granule; Virus; XBP1; Cell biology; Virology; Translation (biology); RNA; Genetics","score_opus":0.03435494057745415,"score_gpt":0.35939957843100045,"score_spread":0.3250446378535463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2390096483","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07801423,0.92019767,0.000012884983,0.0000048292723,0.000081301354,0.0003482061,0.001178275,0.0000175306,0.00014505346],"genre_scores_gemma":[0.007104164,0.9919275,0.000010816315,0.00017699365,0.0003860532,0.00010431431,0.00012842246,0.000058251477,0.00010350761],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980964,0.00033379646,0.00032946834,0.0008770103,0.00011285934,0.00025047475],"domain_scores_gemma":[0.99849063,0.00009594757,0.0002560319,0.0009443576,0.000035119258,0.00017789387],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016381036,0.00041652322,0.0006490188,0.00010848601,0.00009203141,0.00004240923,0.00016983351,0.0003692898,0.000019219366],"category_scores_gemma":[0.0002482578,0.00026985919,0.00019406571,0.000051447554,0.00021002346,0.0000057705524,0.00017281932,0.00012543143,0.00002568185],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073067873,0.00018625308,0.00031950788,0.003684129,0.00026750116,0.00010633124,0.000016320218,6.892635e-7,0.08690106,0.00020705788,0.0020080085,0.9055725],"study_design_scores_gemma":[0.0004131376,0.00062339025,0.00017315886,0.0024366998,0.0002303377,0.000028153545,0.0000049289497,4.1780154e-7,0.018801857,0.00002782569,0.9767872,0.00047288154],"about_ca_topic_score_codex":0.000016865142,"about_ca_topic_score_gemma":0.0000026895298,"teacher_disagreement_score":0.9747792,"about_ca_system_score_codex":0.00002283995,"about_ca_system_score_gemma":0.00018138762,"threshold_uncertainty_score":0.9999754},"labels":[],"label_agreement":null},{"id":"W2406603544","doi":"10.3390/v8060152","title":"Adapting the Stress Response: Viral Subversion of the mTOR Signaling Pathway","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":121,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"PI3K/AKT/mTOR pathway; Cell biology; Biology; Regulator; Signal transduction; Translation (biology); Intracellular; Viral replication; Metabolic pathway; microRNA; Gene; Genetics; Cell culture; Messenger RNA","score_opus":0.046148160249783014,"score_gpt":0.3208229576608461,"score_spread":0.2746747974110631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406603544","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005856926,0.992468,0.00006949216,0.000044979246,0.0005879946,0.00038836032,0.00048548024,0.000013451948,0.00008530712],"genre_scores_gemma":[0.007610946,0.9903959,0.0000677087,0.00018423708,0.0009603251,0.00006318885,0.000024073892,0.000090665184,0.0006029807],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977525,0.000772312,0.00047190944,0.00042090908,0.0002943841,0.0002880117],"domain_scores_gemma":[0.99787027,0.00034917254,0.00060319446,0.00104919,0.00008481069,0.000043345302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071197463,0.00034138467,0.00052182295,0.000046123263,0.00017795191,0.00002776224,0.0012128155,0.00036055598,0.00005488428],"category_scores_gemma":[0.0005892348,0.00016325345,0.0005144494,0.00013449919,0.00021676818,0.0000044744406,0.0005854406,0.00023382157,0.000019526202],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004342933,0.00006107932,0.00006813531,0.0026517806,0.0005006779,0.00000625269,0.00006728769,0.00001673046,0.6079656,0.00008843571,0.0038567898,0.38428298],"study_design_scores_gemma":[0.00011942438,0.00009386976,0.000002367947,0.0054183556,0.000118017386,0.0000056738454,0.000014429677,3.6735747e-7,0.15759419,0.000010940636,0.83641595,0.0002064235],"about_ca_topic_score_codex":0.00002109946,"about_ca_topic_score_gemma":0.0000059253084,"teacher_disagreement_score":0.83255917,"about_ca_system_score_codex":0.000057006808,"about_ca_system_score_gemma":0.00054778863,"threshold_uncertainty_score":0.6657283},"labels":[],"label_agreement":null},{"id":"W2464321038","doi":"10.3390/v8060172","title":"Lambda gpP-DnaB Helicase Sequestration and gpP-RpoB Associated Effects: On Screens for Auxotrophs, Selection for RifR, Toxicity, Mutagenicity, Plasmid Curing","year":2016,"lang":"en","type":"article","venue":"Viruses","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Ministry of Food and Drug Safety","keywords":"dnaB helicase; Plasmid; Biology; rpoB; Escherichia coli; ColE1; Lysogen; Mutant; Molecular biology; Repressor lexA; Bacteriophage; Helicase; Repressor; Genetics; DNA; Gene; RNA; Gene expression","score_opus":0.018465931023633305,"score_gpt":0.2718685514367824,"score_spread":0.2534026204131491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2464321038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931731,0.00015032264,0.0048125926,0.0005815428,0.0002043471,0.00069707993,0.00030261738,0.000057764464,0.000020631307],"genre_scores_gemma":[0.9972085,0.0003918946,0.0010344062,0.0005490094,0.00043948798,0.00014337366,0.00008862572,0.000036244463,0.00010850999],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892247,0.00004951076,0.00020566421,0.00043669876,0.00007537918,0.00031029346],"domain_scores_gemma":[0.99946016,0.00008628354,0.00012467793,0.0001564433,0.00010707922,0.00006532753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015991327,0.00020028731,0.00018506365,0.00006667184,0.00015812147,0.000044237073,0.000100349534,0.00042271515,0.0000045970946],"category_scores_gemma":[0.00036339147,0.00015899626,0.00008053258,0.00006420511,0.000067272464,0.000008505355,0.00007331217,0.000058237947,0.000003403833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038766811,0.000071541406,0.00056208,0.00003465367,0.000073504,5.9356654e-7,0.0000039236706,0.000002757416,0.98933107,0.00029195167,0.00078893,0.008451317],"study_design_scores_gemma":[0.0015756182,0.0025817887,0.00075405266,0.000053029362,0.000043302764,0.000006106418,0.0000045928755,0.00008496393,0.9756258,0.00037227187,0.018667292,0.00023116951],"about_ca_topic_score_codex":0.000030530435,"about_ca_topic_score_gemma":0.00021012728,"teacher_disagreement_score":0.017878363,"about_ca_system_score_codex":0.000035721692,"about_ca_system_score_gemma":0.000048061956,"threshold_uncertainty_score":0.64836794},"labels":[],"label_agreement":null},{"id":"W2475162660","doi":"10.3390/v11040367","title":"Vector Competence of Culicoides sonorensis (Diptera: Ceratopogonidae) for Epizootic Hemorrhagic Disease Virus Serotype 2 Strains from Canada and Florida","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Vector-Borne Animal Diseases","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Institute of Food and Agricultural Sciences, University of Florida; Agricultural Research Service; Centers for Disease Control and Prevention; University of Florida; U.S. Department of Agriculture","keywords":"Ceratopogonidae; Biology; Serotype; Culicoides; Virology; Orbivirus; Epizootic; Virus; Blood meal; Vector (molecular biology); Reoviridae; Zoology; Genetics; Gene; Rotavirus","score_opus":0.01803693767519779,"score_gpt":0.20972518124308873,"score_spread":0.19168824356789094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2475162660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955925,0.001029014,0.0000010496756,0.00020964904,0.00018950402,0.00035917095,0.002547463,0.000038825056,0.00003282619],"genre_scores_gemma":[0.99857116,0.000056444165,0.000098531964,0.00094593415,0.00017899789,0.00002054314,0.000097406555,0.000003019436,0.00002795417],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988506,0.000042376614,0.00023566322,0.0003897463,0.00020292186,0.00027873568],"domain_scores_gemma":[0.99912304,0.00033125377,0.00010756174,0.000103223916,0.00009100388,0.00024390798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000411482,0.00020054802,0.0002951109,0.000010468218,0.00010329787,0.000056721085,0.0002144865,0.000042857206,0.00056816696],"category_scores_gemma":[0.000102232334,0.00009367703,0.000082985556,0.00014714006,0.00007610287,0.00016490521,0.00006905516,0.000056675148,0.000019172261],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018722104,0.000066109445,0.38529313,0.000053144333,0.000042422907,0.00000929854,0.00002338419,0.000014343444,0.6097706,0.00031250788,0.00039801482,0.003829836],"study_design_scores_gemma":[0.00018641829,0.00019006905,0.9774348,0.00003786552,0.000051729843,5.419226e-7,0.00011242273,0.00013524717,0.019304108,0.00019469502,0.002121646,0.00023046465],"about_ca_topic_score_codex":0.42398164,"about_ca_topic_score_gemma":0.55014944,"teacher_disagreement_score":0.5921417,"about_ca_system_score_codex":0.00003707882,"about_ca_system_score_gemma":0.00010805381,"threshold_uncertainty_score":0.622103},"labels":[],"label_agreement":null},{"id":"W2475790156","doi":"10.3390/v8070207","title":"Local Innate Responses to TLR Ligands in the Chicken Trachea","year":2016,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Innate immune system; Biology; Interferon; Receptor; Immunology; RIG-I; Pattern recognition receptor; Immune system; Respiratory tract; Toll-like receptor; Microbiology; Respiratory system; Virology; Anatomy","score_opus":0.023986713476053502,"score_gpt":0.27453208100815096,"score_spread":0.25054536753209744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2475790156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943592,0.00075363024,0.00031139754,0.0036354878,0.00018934802,0.00016232215,0.000009705249,0.00003897733,0.00053991505],"genre_scores_gemma":[0.99667823,0.000087035376,0.0000068760187,0.0017208637,0.000022553124,0.00003655091,0.0000037604966,0.000008488702,0.0014356637],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990578,0.0003109037,0.0002161429,0.0001467025,0.00003164944,0.0002367862],"domain_scores_gemma":[0.99919105,0.00048323735,0.000038679063,0.00025578844,0.00002202654,0.000009237487],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005794898,0.000102525795,0.00012671492,0.00015935882,0.0000901832,0.000013090022,0.00023932799,0.00012837703,0.00021538035],"category_scores_gemma":[0.0002889747,0.00005214483,0.000037856116,0.00017099519,0.00011781223,0.00013837812,0.00004094596,0.00011402397,0.002359301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014143751,0.000056748366,0.0014815576,0.0000025135694,0.000020945632,0.000007419495,0.0013664083,8.3674286e-7,0.955667,0.0008480015,0.0035668588,0.03556732],"study_design_scores_gemma":[0.0006076769,0.00019568198,0.042143565,0.00003929437,0.0000060064535,0.000023442806,0.00025137415,2.1512508e-7,0.7383424,0.00012745548,0.21816729,0.000095605494],"about_ca_topic_score_codex":0.000082974904,"about_ca_topic_score_gemma":0.0000501668,"teacher_disagreement_score":0.21732461,"about_ca_system_score_codex":0.000024789808,"about_ca_system_score_gemma":0.000046366134,"threshold_uncertainty_score":0.9984175},"labels":[],"label_agreement":null},{"id":"W2507534980","doi":"10.3390/v8090241","title":"Effects of Female Sex Hormones on Susceptibility to HSV-2 in Vaginal Cells Grown in Air-Liquid Interface","year":2016,"lang":"en","type":"article","venue":"Viruses","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Ontario HIV Treatment Network","keywords":"Vagina; Biology; Cell culture; Epithelium; In vivo; Cervix; Herpes simplex virus; Sexually transmitted disease; Pathogen; Hormone; Microbiology; Cell biology; Virus; Virology; Endocrinology; Anatomy; Human immunodeficiency virus (HIV); Genetics; Cancer","score_opus":0.01557786385616206,"score_gpt":0.2676995712884018,"score_spread":0.25212170743223977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2507534980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995284,0.0031188151,0.00006343842,0.00010548347,0.00048739373,0.00047494698,0.00001872709,0.000024448695,0.00042274705],"genre_scores_gemma":[0.9990305,0.000042113923,0.000013502435,0.000070879505,0.000020321611,0.00003764296,8.010974e-7,0.000011024851,0.0007732291],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855673,0.0004184803,0.0003013958,0.0004327801,0.000030877618,0.00025972672],"domain_scores_gemma":[0.99916786,0.00033848826,0.000073957344,0.00037356507,0.000029551624,0.00001656394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033142776,0.00015370501,0.00033401913,0.00016905897,0.000020630729,0.0000017034108,0.00018215251,0.00012919716,0.00008921966],"category_scores_gemma":[0.00015319558,0.00010315427,0.000043206,0.00015197521,0.00011754137,0.000091788956,0.00008154628,0.00010480141,0.00061472686],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057467265,0.00023255331,0.048866082,0.000096318065,0.000020094592,0.000005537331,0.0009230198,0.0000067995293,0.9471635,0.000074316595,0.00025130724,0.0017857776],"study_design_scores_gemma":[0.00080125383,0.0009286683,0.12506676,0.00046232424,0.000004334958,0.0000022611434,0.00006756481,1.2359748e-8,0.87113065,0.000037929643,0.0013835307,0.00011474163],"about_ca_topic_score_codex":0.0005066245,"about_ca_topic_score_gemma":0.00016367594,"teacher_disagreement_score":0.07620068,"about_ca_system_score_codex":0.000050762006,"about_ca_system_score_gemma":0.000025121146,"threshold_uncertainty_score":0.7901275},"labels":[],"label_agreement":null},{"id":"W2508374662","doi":"10.3390/v8080220","title":"Spinal Cord Ventral Horns and Lymphoid Organ Involvement in Powassan Virus Infection in a Mouse Model","year":2016,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Mental Health; National Institutes of Health; U.S. Department of Defense","keywords":"Spinal cord; Biology; Anatomy; Virus; Lymphatic system; Virology; Immunology; Pathology; Medicine; Neuroscience","score_opus":0.054576935159051605,"score_gpt":0.321865332237817,"score_spread":0.2672883970787654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508374662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99896485,0.00008798617,0.00035044257,0.000118497206,0.000084959516,0.00021884112,0.000014689119,0.000052258518,0.0001074722],"genre_scores_gemma":[0.99861825,0.00070283207,0.000062525556,0.00037553656,0.00005847535,0.000030181325,0.0000021507851,0.00001569231,0.00013434114],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999208,0.000028675657,0.00022023251,0.00021098595,0.00010609128,0.00022606636],"domain_scores_gemma":[0.9996858,0.000013659178,0.000052320614,0.00013722893,0.000021057813,0.00008992999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011958796,0.00012626317,0.00018475659,0.00029027354,0.000035927136,0.000015076221,0.000025596408,0.00007546916,0.00005412474],"category_scores_gemma":[0.000057753772,0.00009095787,0.000032624586,0.00020319443,0.000055271386,0.0001868756,0.000033485325,0.00008740077,0.00002271117],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046041494,0.0003164772,0.6485843,0.000023595685,0.0000131061615,0.0000122624615,0.000057289548,0.000025583806,0.34190726,0.00022817559,0.000101727805,0.0082698045],"study_design_scores_gemma":[0.0066460166,0.0027256627,0.70015436,0.00049707585,0.000049763585,0.000056145745,0.000063579515,0.0010019522,0.2841849,0.00039174664,0.0038160149,0.00041276478],"about_ca_topic_score_codex":0.006112178,"about_ca_topic_score_gemma":0.0068715047,"teacher_disagreement_score":0.05772236,"about_ca_system_score_codex":0.0002455269,"about_ca_system_score_gemma":0.00007262389,"threshold_uncertainty_score":0.9239825},"labels":[],"label_agreement":null},{"id":"W2521381331","doi":"10.3390/v8090261","title":"Cell Culture Models for the Investigation of Hepatitis B and D Virus Infection","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Horizon 2020 Framework Programme; Université de Strasbourg; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Interreg; European Commission","keywords":"Virology; Hepatitis D virus; Hepatitis B virus; Virus; Hepatitis D; Hepatocellular carcinoma; Cell culture; Biology; Disease; Immunology; Medicine; Cancer research; Pathology; Genetics","score_opus":0.10718702515176688,"score_gpt":0.3489538361794009,"score_spread":0.24176681102763403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2521381331","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001626007,0.99639523,0.0008164248,0.00003339233,0.0001978852,0.0015765525,0.00042841845,0.000042924956,0.0003465791],"genre_scores_gemma":[0.00018247127,0.9982174,0.00024767563,0.00021523835,0.00027598595,0.00043647125,0.000029321278,0.00004757715,0.00034782552],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988942,0.00007447886,0.0004479255,0.0002539832,0.00017095318,0.00015846701],"domain_scores_gemma":[0.9987109,0.00044571862,0.00035936246,0.000271179,0.00015328804,0.000059565144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017791158,0.00027450884,0.0009884841,0.00010828057,0.00012699403,0.000014859709,0.000064057596,0.00023161863,0.000016590091],"category_scores_gemma":[0.00018198573,0.00013868947,0.00022081903,0.00014272572,0.00019328331,0.00012716484,0.00006120831,0.00014519226,0.000018986279],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022085771,0.00004194907,0.0029030775,0.034458436,0.0005612973,0.0000022579723,0.00053609104,9.679618e-7,0.00014823985,0.0007429295,0.021310344,0.93927234],"study_design_scores_gemma":[0.00026145167,0.00017857927,0.0001519268,0.009396407,0.0013553641,0.000009356876,0.0000023518426,0.000017779525,0.00034761854,0.00051094,0.9876085,0.00015971302],"about_ca_topic_score_codex":0.00253465,"about_ca_topic_score_gemma":0.0007266838,"teacher_disagreement_score":0.96629816,"about_ca_system_score_codex":0.00006848911,"about_ca_system_score_gemma":0.00014865311,"threshold_uncertainty_score":0.56555927},"labels":[],"label_agreement":null},{"id":"W2522588356","doi":"10.3390/v8090250","title":"The Host Cell Receptors for Measles Virus and Their Interaction with the Viral Hemagglutinin (H) Protein","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"CD46; Measles virus; Biology; Hemagglutinin (influenza); Virus; Virology; Vero cell; Receptor; Antibody-dependent enhancement; Viral entry; Cell biology; Dengue virus; Immune system; Viral replication; Complement system; Immunology; Vaccination","score_opus":0.04996323430860477,"score_gpt":0.3329006297702514,"score_spread":0.28293739546164665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2522588356","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011103965,0.9949501,0.000041013765,0.0005153527,0.00019696467,0.0025953425,0.00018060506,0.00006156362,0.0003486563],"genre_scores_gemma":[0.0010962725,0.9951787,0.000024728943,0.00049062335,0.0004706454,0.0010696049,0.00002513963,0.000071122624,0.0015731754],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986708,0.00023671595,0.0003113955,0.00035983583,0.0001206457,0.0003005994],"domain_scores_gemma":[0.99834013,0.0007610398,0.000339266,0.00041208035,0.000057528858,0.0000899692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002846588,0.00041244618,0.00076085277,0.00006462983,0.00043653863,0.000055039265,0.00020210691,0.00020952146,0.000051597526],"category_scores_gemma":[0.00016923009,0.00013337794,0.00026349648,0.00008719975,0.00043062243,0.000106968226,0.00006811229,0.00031983355,0.000078752826],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010874686,0.00011477122,0.000013298918,0.0034788596,0.000415621,0.0000040457944,0.00009373579,1.3674752e-8,0.00071789493,0.00033144795,0.0067743286,0.9869685],"study_design_scores_gemma":[0.000453269,0.00064786564,0.000015920006,0.0050879405,0.0006273072,0.000026765938,0.00012644906,5.195403e-7,0.0010918488,0.00005261247,0.99167335,0.00019617252],"about_ca_topic_score_codex":0.0000190601,"about_ca_topic_score_gemma":0.000043550855,"teacher_disagreement_score":0.98677236,"about_ca_system_score_codex":0.000041125593,"about_ca_system_score_gemma":0.00018246916,"threshold_uncertainty_score":0.5438995},"labels":[],"label_agreement":null},{"id":"W2536968103","doi":"10.3390/v8100288","title":"Where in the Cell Are You? Probing HIV-1 Host Interactions through Advanced Imaging Techniques","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Host (biology); Human immunodeficiency virus (HIV); Computational biology; Host factors; Biology; Virology; Genetics; Virus","score_opus":0.04707855005043274,"score_gpt":0.36349857926995305,"score_spread":0.3164200292195203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2536968103","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000107033475,0.9927778,0.000034549892,0.00028383604,0.0001880928,0.0010756103,0.0006064696,0.00010073401,0.004922193],"genre_scores_gemma":[0.00010297781,0.9965274,0.00010227131,0.00013650437,0.000052065385,0.0009218043,0.00016580964,0.000038952345,0.0019522314],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99824286,0.0005213274,0.00036424163,0.00038536784,0.000041846968,0.000444372],"domain_scores_gemma":[0.9987763,0.0004510931,0.00024465445,0.00047937766,0.000034928133,0.0000136261],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016057244,0.00034169873,0.0006844762,0.00016458116,0.00019999678,0.00004196812,0.0004502778,0.00015828184,0.00046894536],"category_scores_gemma":[0.000049248687,0.00017522293,0.00022399849,0.00018426198,0.00015348312,0.00023725467,0.00012857009,0.0006371246,0.004517278],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022560864,0.0003018713,0.00010679918,0.0022239285,0.00016918936,0.0000935831,0.00039114943,1.41333985e-8,0.0013651298,0.00007887326,0.028374668,0.9668722],"study_design_scores_gemma":[0.00023820919,0.000036236263,0.0000040616574,0.0102047855,0.00007979226,0.000078202065,0.00023083955,3.2244407e-9,0.0013135045,0.000016501972,0.9876069,0.00019098386],"about_ca_topic_score_codex":0.00008225225,"about_ca_topic_score_gemma":0.00010100381,"teacher_disagreement_score":0.96668124,"about_ca_system_score_codex":0.00015315144,"about_ca_system_score_gemma":0.00013010217,"threshold_uncertainty_score":0.99625784},"labels":[],"label_agreement":null},{"id":"W2545577014","doi":"10.3390/v8110297","title":"The Importance of Physiologically Relevant Cell Lines for Studying Virus–Host Interactions","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Immortalised cell line; Cell culture; Biology; Interferon; Virus; Cell biology; Phenotype; Primary cell; Viral replication; Cell; Innate immune system; Virology; Gene; Immunology; Genetics; Immune system","score_opus":0.08750252382150983,"score_gpt":0.36655480502354243,"score_spread":0.2790522812020326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2545577014","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005097214,0.99625754,0.000037883656,0.00003175757,0.0014880805,0.00083991984,0.0005012303,0.000049941253,0.00028393298],"genre_scores_gemma":[0.00027006434,0.99302155,0.000028218972,0.00010981801,0.0000987719,0.00031825152,0.000046308527,0.000043738135,0.0060632573],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978947,0.00042672618,0.0009247585,0.00035231764,0.00003023127,0.0003712342],"domain_scores_gemma":[0.994678,0.0037918277,0.0008253366,0.00055322115,0.00013813048,0.000013451629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032002572,0.00037826388,0.0011803498,0.00010523101,0.00034769985,0.000021283337,0.00061368366,0.0002932235,0.0002761868],"category_scores_gemma":[0.0005101691,0.00017651095,0.0006410371,0.00009618779,0.0003260369,0.00007201314,0.00019421289,0.00034353562,0.0005582191],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009548736,0.00041857886,0.000010079556,0.0032853463,0.0013401691,0.0000025595662,0.00009860881,5.689279e-8,0.28393522,0.0011271812,0.023255153,0.6855722],"study_design_scores_gemma":[0.0002552785,0.0003152686,0.000009079671,0.0033424355,0.00022738246,0.000014262254,0.000058843863,3.8424158e-8,0.018078847,0.00003101211,0.97744584,0.00022172737],"about_ca_topic_score_codex":0.0000113145,"about_ca_topic_score_gemma":0.000021447724,"teacher_disagreement_score":0.9541907,"about_ca_system_score_codex":0.00004599886,"about_ca_system_score_gemma":0.00016871816,"threshold_uncertainty_score":0.71979076},"labels":[],"label_agreement":null},{"id":"W2553735362","doi":"10.3390/v8110303","title":"Plant Virus–Insect Vector Interactions: Current and Potential Future Research Directions","year":2016,"lang":"en","type":"review","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":235,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"University of Queensland","keywords":"Biology; Host (biology); Insect; Plant virus; Vector (molecular biology); Virus; Virology; Transmission (telecommunications); Viral replication; Computational biology; Genetics; Ecology; Gene; Computer science","score_opus":0.2559393217475041,"score_gpt":0.4220160765905498,"score_spread":0.16607675484304568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553735362","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022179705,0.9870968,1.6929489e-7,0.00019737323,0.001181582,0.00063929695,0.010371278,0.000114444956,0.00017724214],"genre_scores_gemma":[0.00001882425,0.9954664,0.0000040053214,0.000019118292,0.0036445952,0.0003116223,0.00022366829,0.0000043223413,0.00030742981],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99689317,0.0007872041,0.0004006864,0.00066655956,0.000602022,0.0006503521],"domain_scores_gemma":[0.9976874,0.0017050824,0.00014522902,0.0001218839,0.00013337491,0.0002070212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054921827,0.0003883973,0.0008316161,0.0001483459,0.0009567757,0.00021981192,0.00044153628,0.00018853399,0.00058292906],"category_scores_gemma":[0.00028654045,0.00011676939,0.00026632205,0.0006403926,0.00025062403,0.00023126119,0.00050895486,0.00090890285,0.0006412591],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002391439,0.00008053662,0.0000021140117,0.00050509546,0.000104964376,0.00001673539,0.0000118030475,2.0906732e-9,0.0024513258,0.000056390152,0.024761556,0.9719856],"study_design_scores_gemma":[0.000040281546,0.00009731518,0.00014602444,0.0040348102,0.000059841946,0.000057426274,0.000028076996,2.0076833e-7,0.00004684418,0.00004113903,0.99516654,0.00028152653],"about_ca_topic_score_codex":0.00035676803,"about_ca_topic_score_gemma":0.0012112912,"teacher_disagreement_score":0.97170407,"about_ca_system_score_codex":0.00013313617,"about_ca_system_score_gemma":0.00006278856,"threshold_uncertainty_score":0.8242302},"labels":[],"label_agreement":null},{"id":"W2574242476","doi":"10.3390/v9010018","title":"Control of Hepatitis B Virus by Cytokines","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":125,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Helmholtz-Alberta Initiative; Deutsche Forschungsgemeinschaft","keywords":"Hepatitis B virus; Immunology; Virology; Virus; cccDNA; Cytokine; Viral replication; Immune system; Medicine; Hepatitis B; Biology; HBsAg","score_opus":0.12294894377324075,"score_gpt":0.3971464008750317,"score_spread":0.274197457101791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2574242476","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004850365,0.9929345,0.00003335088,0.000029447949,0.00041705807,0.001136128,0.0033487955,0.00009312515,0.0019590566],"genre_scores_gemma":[0.0003846372,0.99757636,0.00007367411,0.00035525256,0.00040754597,0.00023522902,0.000088645946,0.00011929414,0.00075939286],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975677,0.00013764019,0.0009997489,0.00046848936,0.00043829475,0.00038814003],"domain_scores_gemma":[0.9972116,0.0003645204,0.0010086076,0.0010774414,0.0001858673,0.00015196232],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021714791,0.0005889928,0.0042244666,0.00022750527,0.00016007859,0.00003335261,0.00037626468,0.00038170093,0.00028293123],"category_scores_gemma":[0.0010117299,0.00044282837,0.00069371087,0.00011863962,0.00036276696,0.00011267595,0.0001298463,0.00034917143,0.0004824779],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027702516,0.00017673941,0.0065510185,0.019560369,0.0014578978,0.00010525903,0.000024502993,1.1979666e-8,0.000085685635,0.00008700255,0.047428172,0.92449564],"study_design_scores_gemma":[0.0005510335,0.00020919465,0.0002529273,0.015563854,0.002656249,0.00003685296,5.7149214e-7,5.2449025e-7,0.00013230908,0.000008426013,0.9802489,0.00033910555],"about_ca_topic_score_codex":0.014012151,"about_ca_topic_score_gemma":0.0012544628,"teacher_disagreement_score":0.9328208,"about_ca_system_score_codex":0.00010656231,"about_ca_system_score_gemma":0.0003604027,"threshold_uncertainty_score":0.99980235},"labels":[],"label_agreement":null},{"id":"W2579472717","doi":"10.3390/v9010013","title":"Adenoviral Vectors Armed with Cell Fusion-Inducing Proteins as Anti-Cancer Agents","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Cancer; Clinical trial; Medicine; Disease; Viral vector; Vector (molecular biology); Cancer research; Limiting; Immunology; Bioinformatics; Oncology; Biology; Internal medicine; Recombinant DNA","score_opus":0.1211794963849259,"score_gpt":0.4150088058195715,"score_spread":0.2938293094346456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2579472717","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06844534,0.92885786,0.000004094096,0.000011196947,0.00020252848,0.001490672,0.00018748018,0.000030301266,0.00077052636],"genre_scores_gemma":[0.0029715253,0.99249876,0.0000431952,0.00017349992,0.0007904552,0.0005231881,0.00018619749,0.0001961688,0.0026170288],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972992,0.00025555282,0.00039036872,0.0009474327,0.00046687096,0.0006406097],"domain_scores_gemma":[0.99777836,0.000017841536,0.0004890684,0.0014053839,0.00010452402,0.00020483775],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002730237,0.0006320983,0.0010151241,0.00017916398,0.0003443207,0.00015142914,0.001046538,0.0005238943,0.0003257933],"category_scores_gemma":[0.00007250663,0.00046821067,0.0003365061,0.00015384684,0.00019846571,0.000010101631,0.0003563549,0.00046458587,0.00027483056],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008445469,0.00034313317,0.00021796589,0.007219057,0.0010492931,0.00011568832,0.00005925126,0.000017222666,0.12049445,0.0000017987657,0.0028303724,0.8668072],"study_design_scores_gemma":[0.00044455146,0.0014674991,0.000007055908,0.002091916,0.00017393002,0.000011098827,0.0000066434095,3.9054203e-7,0.13856806,9.33177e-7,0.85666424,0.0005636989],"about_ca_topic_score_codex":0.00019386537,"about_ca_topic_score_gemma":0.00015703286,"teacher_disagreement_score":0.86624354,"about_ca_system_score_codex":0.00007185711,"about_ca_system_score_gemma":0.0013854569,"threshold_uncertainty_score":0.99977696},"labels":[],"label_agreement":null},{"id":"W2598674247","doi":"10.3390/v9030054","title":"1st Workshop of the Canadian Society for Virology","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal; Beatrice Hunter Cancer Research Institute; Dalhousie University","funders":"Canadian Institutes of Health Research; University of Ottawa; McMaster University; University of Florida","keywords":"Library science; Variety (cybernetics); Miller; Oncolytic virus; Political science; Virology; Medicine; Virus; Biology; Computer science; Ecology","score_opus":0.11847145855277608,"score_gpt":0.40208890797681124,"score_spread":0.28361744942403516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2598674247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97782993,0.00014580935,0.000056305882,0.009932146,0.000298194,0.0004168676,0.000052762512,0.000010960427,0.011257038],"genre_scores_gemma":[0.99620575,0.00002779016,0.00012061943,0.0015005881,0.00013081766,0.00001834012,0.0000011396712,0.0000067788224,0.0019882051],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99963325,0.0000070357646,0.000066266686,0.000072964205,0.000066710614,0.00015377894],"domain_scores_gemma":[0.9994746,0.000038658753,0.00003657431,0.00032068454,0.000059174814,0.00007033867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116518466,0.00003863984,0.000089857334,0.00002245242,0.0005604492,0.000023130682,0.00011688309,0.00007028576,0.00010010883],"category_scores_gemma":[0.0001837867,0.000023617633,0.00013906762,0.00003215731,0.0002178522,0.000037802387,0.00003916357,0.000096549884,0.00001077167],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027359542,0.0002450961,0.5005842,0.00022233342,0.00060921995,0.000008152638,0.00068451784,0.000017789867,0.15645479,0.011988439,0.27039364,0.058518253],"study_design_scores_gemma":[0.0010093126,0.0001624701,0.41177416,0.00004842637,0.00007018664,0.000011748066,0.00009611883,0.00029282947,0.037544485,0.0003855722,0.5485275,0.00007722494],"about_ca_topic_score_codex":0.09846676,"about_ca_topic_score_gemma":0.3180765,"teacher_disagreement_score":0.27813384,"about_ca_system_score_codex":0.00004031198,"about_ca_system_score_gemma":0.00024269991,"threshold_uncertainty_score":0.9075366},"labels":[],"label_agreement":null},{"id":"W2599805425","doi":"10.3390/v9030055","title":"Virological Surveillance of Influenza A Subtypes Isolated in 2014 from Clinical Outbreaks in Canadian Swine","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Swine Innovation Porc","keywords":"Outbreak; Virology; Medicine; Pandemic; Coronavirus disease 2019 (COVID-19); Environmental health; Internal medicine; Infectious disease (medical specialty); Disease","score_opus":0.16879979098526343,"score_gpt":0.45578190893698006,"score_spread":0.28698211795171663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2599805425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950635,0.0016919761,0.0000010627119,0.0007388791,0.00011709932,0.00032307653,0.00014671592,0.000021186974,0.0018965421],"genre_scores_gemma":[0.99681556,0.0006504121,0.00009331257,0.0022418897,0.00012416676,0.000018117338,0.000007026466,0.000017280056,0.0000322339],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99782914,0.00020355807,0.00074243185,0.00037777156,0.00026285576,0.00058422785],"domain_scores_gemma":[0.99817044,0.00049823266,0.00018832479,0.00074662094,0.00011307561,0.00028331997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011695909,0.00018059569,0.00076259946,0.0002926008,0.00009996336,0.000027998605,0.00035367324,0.00026231355,0.00024747488],"category_scores_gemma":[0.00573204,0.00014449393,0.00008622027,0.0001272334,0.00049901963,0.00013855913,0.00018099822,0.0005315928,0.00018673984],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011054944,0.00013802774,0.993944,0.000017690036,0.0000611417,0.0002064839,0.00011379312,0.0000068298223,0.001795776,0.000037345628,0.0008579346,0.0017154978],"study_design_scores_gemma":[0.002555699,0.00027660944,0.9752879,0.00009710966,0.000008764977,0.0000014236683,0.00002505195,0.00018103473,0.00039741915,0.00010343394,0.020936117,0.00012945053],"about_ca_topic_score_codex":0.73942935,"about_ca_topic_score_gemma":0.80466366,"teacher_disagreement_score":0.065234296,"about_ca_system_score_codex":0.00012341759,"about_ca_system_score_gemma":0.00038510532,"threshold_uncertainty_score":0.6862201},"labels":[],"label_agreement":null},{"id":"W2607727609","doi":"10.3390/v9040090","title":"Replication and Oncolytic Activity of an Avian Orthoreovirus in Human Hepatocellular Carcinoma Cells","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Oncolytic virus; Virology; Hepatocellular carcinoma; Biology; Virus; Interferon; Viral replication; Hepatitis C virus; Cytolysis; Cancer research; Cytotoxic T cell; Genetics","score_opus":0.04901558752989468,"score_gpt":0.35009053623489206,"score_spread":0.3010749487049974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607727609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992109,0.00021073288,0.000010749338,0.000025541885,0.00002191916,0.0002510095,0.000023869115,0.000005773104,0.00023951405],"genre_scores_gemma":[0.99959475,0.00009258615,0.00005370648,0.000055266133,0.000064454776,0.000024027791,0.0000151890235,0.000021332915,0.00007868372],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901754,0.000106249,0.00015058606,0.00041576786,0.00012503794,0.0001848488],"domain_scores_gemma":[0.9982793,0.000007974347,0.0001371157,0.0014492982,0.000044512915,0.00008181104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038706773,0.00011458336,0.00015105541,0.00006387215,0.00015963866,0.00003950635,0.00032622638,0.00011440198,0.000009783562],"category_scores_gemma":[0.000055275865,0.000117029194,0.00003387851,0.000035771,0.00018933252,0.00001568138,0.00013319602,0.000087627646,0.0000031114284],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042617557,0.00023691067,0.10255262,0.000017665354,0.0000098850915,0.0000059279355,0.000031510066,0.0000018591437,0.8896075,0.000011028919,0.000010017331,0.0070889173],"study_design_scores_gemma":[0.0009097491,0.001167219,0.08139092,0.000008003241,0.0000053710805,0.0000016914053,0.000010013272,0.00013479398,0.9157981,0.000047258636,0.00041226987,0.00011457681],"about_ca_topic_score_codex":0.0009906017,"about_ca_topic_score_gemma":0.0016024809,"teacher_disagreement_score":0.026190653,"about_ca_system_score_codex":0.000016778202,"about_ca_system_score_gemma":0.00007122976,"threshold_uncertainty_score":0.4772312},"labels":[],"label_agreement":null},{"id":"W2612952098","doi":"10.3390/v9050107","title":"A Conserved Residue, Tyrosine (Y) 84, in H5N1 Influenza A Virus NS1 Regulates IFN Signaling Responses to Enhance Viral Infection","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Toronto General Hospital; University of Toronto; Canada Research Chairs; University Health Network","funders":"","keywords":"Biology; Interferon; Virology; Influenza A virus; Virulence; Tyrosine; Virus; Downregulation and upregulation; Tyrosine phosphorylation; Titer; Influenza A virus subtype H5N1; Phosphorylation; Recombinant DNA; Gene; Cell biology; Genetics; Biochemistry","score_opus":0.037266186108786334,"score_gpt":0.34063537941579447,"score_spread":0.3033691933070081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2612952098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953361,0.0026632063,0.00003847615,0.00030295673,0.0006961898,0.00036765434,0.00005161309,0.00014060656,0.00040316803],"genre_scores_gemma":[0.99371654,0.00014916192,0.00009481204,0.0019304805,0.000051007668,0.00007390458,0.000009037578,0.000037819154,0.0039372183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99774045,0.0005868152,0.0005671108,0.00048283863,0.000060164784,0.0005626054],"domain_scores_gemma":[0.99829906,0.00042019444,0.00027907238,0.0008457395,0.00011390322,0.00004203973],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00061122264,0.00031953322,0.00046617445,0.00044177446,0.0006239013,0.00016698932,0.00046614927,0.00032442156,0.0005064045],"category_scores_gemma":[0.0021533377,0.00030008543,0.00011321424,0.00014276932,0.0003702303,0.00045824368,0.00028619266,0.00038474577,0.0013972869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008099965,0.00013512663,0.021116093,0.000018842298,0.000078092664,0.000021024573,0.00045248834,0.000011034655,0.9660822,0.0001766748,0.001974714,0.0018337105],"study_design_scores_gemma":[0.0008534984,0.0004632571,0.1622954,0.00028657386,0.000018817882,0.000024604173,0.000041506464,0.0000014090313,0.79001594,0.00009036881,0.04562001,0.000288596],"about_ca_topic_score_codex":0.007834419,"about_ca_topic_score_gemma":0.0025089418,"teacher_disagreement_score":0.17606628,"about_ca_system_score_codex":0.00009232785,"about_ca_system_score_gemma":0.0001389795,"threshold_uncertainty_score":0.9999451},"labels":[],"label_agreement":null},{"id":"W2613198068","doi":"10.3390/v9050106","title":"Implementation of Objective PASC-Derived Taxon Demarcation Criteria for Official Classification of Filoviruses","year":2017,"lang":"en","type":"letter","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases; Chinese Academy of Sciences; U.S. Department of Homeland Security; Battelle; Science and Technology Directorate; World Health Organization; National Institutes of Health; U.S. Department of Health and Human Services; U.S. Department of Defense","keywords":"Taxon; Geography; Archaeology; Biology; Ecology","score_opus":0.14610755557708835,"score_gpt":0.4484860474533519,"score_spread":0.30237849187626353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2613198068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81938064,0.0007609755,0.015655467,0.13742378,0.002449439,0.012491003,0.008120078,0.00023354856,0.003485093],"genre_scores_gemma":[0.9692592,0.00024167265,0.0012781514,0.02195739,0.0037441251,0.0007305189,0.0021760878,0.00011188362,0.00050098],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983015,0.00011274528,0.0005991813,0.000344236,0.00039031982,0.00025199092],"domain_scores_gemma":[0.9976151,0.00022538479,0.00082694046,0.0004785762,0.00081543735,0.00003858846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027586383,0.00022286343,0.00056867773,0.00042963517,0.00015493845,0.000036312926,0.00015455493,0.00042814866,0.000397624],"category_scores_gemma":[0.00028631656,0.00020197575,0.00023369801,0.00012047384,0.00020238209,0.0002002556,0.000043846405,0.00034892472,0.000013206036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000491653,0.00015019321,0.004192605,0.0014362592,0.0003380764,0.00000516929,0.00022234971,5.7400916e-7,0.4931727,0.00008203284,0.48477912,0.015129278],"study_design_scores_gemma":[0.0021402335,0.0015453922,0.11409069,0.00044033662,0.00059172785,0.000011144191,0.00042626544,0.00010019904,0.52912784,0.00021240555,0.35098812,0.00032563938],"about_ca_topic_score_codex":0.002330447,"about_ca_topic_score_gemma":0.0002586549,"teacher_disagreement_score":0.14987858,"about_ca_system_score_codex":0.00012267704,"about_ca_system_score_gemma":0.0004327737,"threshold_uncertainty_score":0.8236332},"labels":[],"label_agreement":null},{"id":"W2614365707","doi":"10.3390/v9050116","title":"Variation in the Genetic Repertoire of Viruses Infecting Micromonas pusilla Reflects Horizontal Gene Transfer and Links to Their Environmental Distribution","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; University of British Columbia","funders":"Tula Foundation; Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Broad Institute; Gordon and Betty Moore Foundation","keywords":"Biology; Horizontal gene transfer; Gene; Genome; Genetics; Evolutionary biology; Ecotype; Gene family; Genetic diversity; Population","score_opus":0.019450360118664876,"score_gpt":0.2571570322380303,"score_spread":0.23770667211936544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2614365707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99886316,0.000067500645,0.0003217404,0.00012405754,0.00010075997,0.00023443905,0.00013978801,0.000008560557,0.00014001674],"genre_scores_gemma":[0.99932194,0.00010493552,0.0001595196,0.00032404263,0.0000443848,0.000016503449,0.000008599276,0.000009945422,0.000010120111],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992637,0.000058923073,0.00020009118,0.00023177791,0.00008764469,0.00015787034],"domain_scores_gemma":[0.99955285,0.000046236022,0.00006904821,0.00029172192,0.0000024381677,0.000037706654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013615022,0.00011942442,0.000116150826,0.000020340176,0.00033682206,0.00008792342,0.0001939461,0.00008555885,0.00012627618],"category_scores_gemma":[0.0000345624,0.000089259534,0.000039739967,0.000046507244,0.00012628658,0.00027259006,0.00011553038,0.00014081296,0.000029499119],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024355712,0.00007305205,0.020806657,0.0000026991393,0.0000067645065,0.0000033768795,0.0012731543,0.000018093544,0.96916324,0.000005067399,0.000024144854,0.008599425],"study_design_scores_gemma":[0.00014548279,0.00009284255,0.715134,0.000014692604,0.000010799778,0.000025428815,0.00008192757,0.000012413438,0.28064382,0.00001727847,0.0037335327,0.00008773746],"about_ca_topic_score_codex":0.0026433365,"about_ca_topic_score_gemma":0.0013433114,"teacher_disagreement_score":0.6943274,"about_ca_system_score_codex":0.000085063715,"about_ca_system_score_gemma":0.000004583293,"threshold_uncertainty_score":0.39959517},"labels":[],"label_agreement":null},{"id":"W2625281702","doi":"10.3390/v9060152","title":"Nutrients and Other Environmental Factors Influence Virus Abundances across Oxic and Hypoxic Marine Environments","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Tula Foundation; University of British Columbia; Fisheries and Oceans Canada","funders":"Hakai Institute; Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Tula Foundation","keywords":"Abundance (ecology); Prokaryote; Ecology; Environmental science; Nutrient; Biology; Range (aeronautics); Salinity; Ecosystem; Oceanography; Geology","score_opus":0.018278712565726205,"score_gpt":0.2739926896284162,"score_spread":0.25571397706269,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2625281702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998841,0.00007226607,0.000005780925,0.000026885999,0.00012545694,0.00015690547,0.0002012126,0.000017335058,0.00055316946],"genre_scores_gemma":[0.9980962,0.0005126066,0.00010535421,0.00038037737,0.00002610362,0.000010790063,0.000004680444,0.000022151373,0.00084173563],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989443,0.000022322622,0.00017565541,0.00040813413,0.0001390783,0.0003105053],"domain_scores_gemma":[0.9992853,0.00002868901,0.00016528083,0.0003798791,5.650792e-7,0.00014031644],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006468321,0.00021457409,0.00015931387,0.000015854648,0.0008264629,0.00025260256,0.00026256885,0.00007236773,0.0014749019],"category_scores_gemma":[0.000018948975,0.00018765344,0.00003279134,0.000017754022,0.00089030276,0.00094744813,0.00086434,0.00011471513,0.00031250613],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015521211,0.000071573224,0.46762,0.0000022767852,0.000012495183,0.0000039314514,0.00028631152,0.0000041153157,0.5275777,0.000002331492,0.000028223012,0.0043755104],"study_design_scores_gemma":[0.00028601685,0.000048661946,0.8515494,0.000009987334,0.000011261958,0.000011910318,0.0000937757,0.0000071856584,0.06580164,0.000037476304,0.081953675,0.00018902477],"about_ca_topic_score_codex":0.003182961,"about_ca_topic_score_gemma":0.00042125143,"teacher_disagreement_score":0.46177608,"about_ca_system_score_codex":0.00006897672,"about_ca_system_score_gemma":0.0000016151137,"threshold_uncertainty_score":0.99943787},"labels":[],"label_agreement":null},{"id":"W2719980758","doi":"10.3390/v9070160","title":"HHV-6A/B Integration and the Pathogenesis Associated with the Reactivation of Chromosomally Integrated HHV-6A/B","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Telomere; Biology; Genome; Genetics; Population; Germinal center; Virology; B cell; Gene","score_opus":0.1439333134344656,"score_gpt":0.39027395294215,"score_spread":0.2463406395076844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2719980758","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003910913,0.9904532,0.000037702837,0.000453389,0.00009231299,0.0027080614,0.00029205685,0.000067243534,0.0019851099],"genre_scores_gemma":[0.006425793,0.99134105,0.00003394244,0.000195876,0.00020292387,0.0002941228,0.00028204208,0.00009545023,0.0011287793],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99713254,0.0006587683,0.00069589005,0.00046587212,0.00070809625,0.0003388364],"domain_scores_gemma":[0.9959692,0.0012710991,0.0011257994,0.0010057873,0.0005252092,0.0001029537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015332755,0.0005074096,0.0019497443,0.00027232346,0.00043657632,0.00019417457,0.0004646179,0.00042499197,0.000109704306],"category_scores_gemma":[0.0018071308,0.00020643981,0.00034712782,0.00055350683,0.0008845171,0.00019709638,0.00013448048,0.0009020804,0.00002766452],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005662365,0.00014503564,0.0001020038,0.0017449947,0.0009907237,0.000022707552,0.00030100413,1.28619e-7,0.00046011273,0.0004968828,0.0012392574,0.99393094],"study_design_scores_gemma":[0.0016079366,0.00031335154,0.0012484471,0.013254818,0.001967638,0.00004976794,0.00014427476,0.000026597074,0.00027067986,0.000026851136,0.9808071,0.00028251557],"about_ca_topic_score_codex":0.0012589564,"about_ca_topic_score_gemma":0.0009503424,"teacher_disagreement_score":0.9936484,"about_ca_system_score_codex":0.00020558841,"about_ca_system_score_gemma":0.0009846026,"threshold_uncertainty_score":0.8418371},"labels":[],"label_agreement":null},{"id":"W2731095377","doi":"10.3390/v9070170","title":"Update on Senecavirus Infection in Pigs","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Division of Graduate Education; Fundação Araucária; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Financiadora de Estudos e Projetos; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Epidemiology; Outbreak; Disease; Virus; Biology; Virology; Host (biology); Immunology; Medicine; Pathology; Genetics","score_opus":0.33532144332813935,"score_gpt":0.5105937915162372,"score_spread":0.17527234818809784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2731095377","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044660634,0.9963851,0.0000036102858,0.00009499512,0.00030142008,0.00058425113,0.00006925776,0.00004856424,0.0020661831],"genre_scores_gemma":[0.00018117098,0.9979089,0.00003413308,0.00081567967,0.00041584336,0.00012195898,0.00012745282,0.0000438811,0.0003509722],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99816066,0.00032620147,0.0004938663,0.00039097673,0.00016757839,0.00046073133],"domain_scores_gemma":[0.99893254,0.000052104642,0.00022494733,0.0005957532,0.00002495275,0.00016967278],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042340174,0.00029282,0.001767509,0.00045163665,0.000064999316,0.000030386462,0.00015596552,0.00030180748,0.00018489486],"category_scores_gemma":[0.0010317455,0.00021583358,0.00032383256,0.000095901494,0.000100669015,0.00008343636,0.00009502336,0.00075514475,0.0017962146],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000759781,0.000091776994,0.0027758898,0.0038779695,0.00007134214,0.00030841515,0.0000015358203,2.2179626e-7,0.000001480478,0.00004068088,0.0061246157,0.9866301],"study_design_scores_gemma":[0.0003543686,0.00043943047,0.0020806848,0.013745594,0.00008782553,0.00012144821,2.756144e-7,0.000001030515,8.3373897e-7,0.00002198124,0.9830271,0.00011941596],"about_ca_topic_score_codex":0.0007986628,"about_ca_topic_score_gemma":0.00030758584,"teacher_disagreement_score":0.9865107,"about_ca_system_score_codex":0.00017298589,"about_ca_system_score_gemma":0.00016685805,"threshold_uncertainty_score":0.998981},"labels":[],"label_agreement":null},{"id":"W2733404270","doi":"10.3390/v9070164","title":"LMP1 and Dynamic Progressive Telomere Dysfunction: A Major Culprit in EBV-Associated Hodgkin’s Lymphoma","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Manitoba; Jewish General Hospital","funders":"","keywords":"Telomere; Shelterin; Germinal center; Biology; Telomerase; Cancer research; Molecular biology; Genetics; B cell; Transcription factor; Gene; Antibody; DNA-binding protein","score_opus":0.12539105952776677,"score_gpt":0.43521916149902773,"score_spread":0.309828101971261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2733404270","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020850897,0.99279124,5.4807697e-7,0.00010739235,0.00023808898,0.002149428,0.00025582878,0.000117295,0.002255096],"genre_scores_gemma":[0.0008107679,0.994739,0.00004982425,0.00015832392,0.00023391192,0.0005561796,0.00015277388,0.00015462088,0.0031445757],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99657464,0.00023802485,0.00083898567,0.000914976,0.00065356126,0.00077978306],"domain_scores_gemma":[0.99771285,0.00024917524,0.0006027735,0.0009354401,0.00016102697,0.00033875703],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00056510145,0.0006973937,0.0028625657,0.0008747941,0.00031644633,0.00027628546,0.0003858319,0.0008472804,0.0005034002],"category_scores_gemma":[0.00064275943,0.0005389963,0.00042506313,0.00051716843,0.0003880399,0.00022703831,0.0003431149,0.000789651,0.0005134761],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012274351,0.0003488248,0.0007884372,0.008788887,0.0005183166,0.0010050883,0.00006107101,1.1801766e-8,0.0000042520232,0.00004233163,0.0010529861,0.9872671],"study_design_scores_gemma":[0.0022792716,0.00028251534,0.0027777192,0.022402154,0.000786513,0.00030961595,0.000028482418,0.000009952614,0.0000034050684,0.000039643688,0.97056735,0.000513389],"about_ca_topic_score_codex":0.00067628425,"about_ca_topic_score_gemma":0.00071272097,"teacher_disagreement_score":0.98675364,"about_ca_system_score_codex":0.0008567609,"about_ca_system_score_gemma":0.0012813506,"threshold_uncertainty_score":0.99970615},"labels":[],"label_agreement":null},{"id":"W2738790149","doi":"10.3390/v9080196","title":"Perspectives on the Evolution of Porcine Parvovirus","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Porcine parvovirus; Biology; Strain (injury); Parvovirus; Gene; Genetics; Parvoviridae; Virology; Virus","score_opus":0.06640419401693581,"score_gpt":0.27670571385649667,"score_spread":0.21030151983956086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2738790149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9801634,0.00036537225,0.000001575469,0.0012921062,0.00006409679,0.00008254173,0.000024182593,0.000027676177,0.01797908],"genre_scores_gemma":[0.99948776,0.00008902427,0.000007253895,0.00008356826,0.00016507921,0.000009649064,2.752244e-7,4.0703588e-7,0.0001569596],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995596,0.000030343394,0.00008318161,0.00012449056,0.00010392064,0.00009849645],"domain_scores_gemma":[0.9995517,0.00016138128,0.00011763254,0.00009990112,0.000054261818,0.000015119903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119536846,0.000068334164,0.000085823885,0.0000060000575,0.00085963955,0.00003421726,0.00023028362,0.000026626174,0.0002885026],"category_scores_gemma":[0.00033762772,0.00001832508,0.00005241424,0.000055015887,0.0002463965,0.00009175709,0.000079716534,0.000056634413,0.000103052116],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001186752,0.00025191845,0.24511771,0.0000033930016,0.00005354558,0.0000013929975,0.00040832086,0.0000030903004,0.5474776,0.19360605,0.003953929,0.009004396],"study_design_scores_gemma":[0.000043125612,0.0002645847,0.9723759,0.000010784837,0.000009255496,7.1093666e-7,0.0037712152,0.0000031822804,0.011550893,0.0012961299,0.010603866,0.00007030427],"about_ca_topic_score_codex":0.0024126263,"about_ca_topic_score_gemma":0.0007042541,"teacher_disagreement_score":0.72725827,"about_ca_system_score_codex":0.00003144063,"about_ca_system_score_gemma":0.0000035540759,"threshold_uncertainty_score":0.66117394},"labels":[],"label_agreement":null},{"id":"W2744696165","doi":"10.3390/v9080207","title":"The Susceptibilities of Respiratory Syncytial Virus to Nucleolin Receptor Blocking and Antibody Neutralization are Dependent upon the Method of Virus Purification","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation","keywords":"Fast protein liquid chromatography; Polyclonal antibodies; Nucleolin; Neutralization; Chemistry; Molecular biology; Western blot; Virus; Virology; Antibody; Biology; Biochemistry; Chromatography; High-performance liquid chromatography","score_opus":0.09166001963860959,"score_gpt":0.42892709815126423,"score_spread":0.33726707851265464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744696165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643856,0.0006651735,0.001083854,0.00041618757,0.00019692034,0.000822091,0.000045925663,0.000029693521,0.00030161807],"genre_scores_gemma":[0.99865234,0.00031238433,0.0004324429,0.00023560032,0.0001936537,0.00004761516,0.000002368698,0.00002982388,0.00009379368],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980533,0.00043232026,0.0005191902,0.00029310686,0.00047073688,0.0002313211],"domain_scores_gemma":[0.99753785,0.00039486593,0.0004570006,0.0011151895,0.00040293578,0.00009215457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016169731,0.00015342401,0.0003014186,0.00017085385,0.00077547255,0.0001322889,0.00035252818,0.00010840152,0.00005475728],"category_scores_gemma":[0.001926621,0.0000955999,0.00007479781,0.00017331546,0.00038209528,0.00022993963,0.00016929915,0.00021400128,0.000017494689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004420906,0.00010796675,0.041222423,0.00009909578,0.00006238315,0.0000013447619,0.00039589108,0.00009866182,0.9455202,0.0018424785,0.0002486932,0.009958723],"study_design_scores_gemma":[0.00044950674,0.0005108127,0.1670113,0.00013559272,0.000057175443,0.0000039391675,0.00054186455,0.000108281565,0.81662714,0.000111595014,0.014341077,0.0001017215],"about_ca_topic_score_codex":0.0013601502,"about_ca_topic_score_gemma":0.00095954695,"teacher_disagreement_score":0.12889312,"about_ca_system_score_codex":0.00006542924,"about_ca_system_score_gemma":0.00012214403,"threshold_uncertainty_score":0.59643865},"labels":[],"label_agreement":null},{"id":"W2747867354","doi":"10.3390/v9080227","title":"Deciphering Single Nucleotide Polymorphisms and Evolutionary Trends in Isolates of the Cydia pomonella granulovirus","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biology; Genome; Genetics; Gene","score_opus":0.02014952437480078,"score_gpt":0.2701537241136621,"score_spread":0.25000419973886134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747867354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956604,0.0024200943,0.000008722118,0.00006476254,0.00023949565,0.000046401656,0.00002828069,0.0000056409262,0.001526164],"genre_scores_gemma":[0.9992516,0.00020406077,0.00005200313,0.0001678705,0.0001065678,0.000006125015,0.0000032736953,0.000012992589,0.00019549919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994379,0.000031876636,0.00014028887,0.00019265189,0.00006101506,0.00013626191],"domain_scores_gemma":[0.9993971,0.000008548412,0.00011625921,0.00041671493,0.00001868576,0.000042697673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000043604676,0.00010044293,0.00009807783,0.00003599761,0.00020940577,0.000033333225,0.00020145548,0.000071427676,0.000029297924],"category_scores_gemma":[0.000055547625,0.00007647677,0.00006856152,0.000041099705,0.00017549178,0.000010455113,0.0002365753,0.00004626875,0.0000018893733],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056054323,0.00006700017,0.14194937,0.0000051179486,0.000013269933,0.0000011243159,0.000022959814,0.00004014472,0.85294837,0.000022941298,0.0011279383,0.0037457345],"study_design_scores_gemma":[0.00046313228,0.00014573641,0.47621974,0.000049607,0.000012807504,0.000007249278,0.000021871316,0.000034043656,0.5154764,0.0003722866,0.0070443857,0.00015275998],"about_ca_topic_score_codex":0.0005325742,"about_ca_topic_score_gemma":0.00021402976,"teacher_disagreement_score":0.33747196,"about_ca_system_score_codex":0.000007038489,"about_ca_system_score_gemma":0.000015781598,"threshold_uncertainty_score":0.3118632},"labels":[],"label_agreement":null},{"id":"W2751447020","doi":"10.3390/v9090253","title":"Re-Assembly and Analysis of an Ancient Variola Virus Genome","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Genome; Biology; Variola virus; Vaccinia; Genetics; Cowpox virus; Virus; Orthopoxvirus; Lineage (genetic); Virology; Gene","score_opus":0.041089564714019415,"score_gpt":0.3226906471109221,"score_spread":0.2816010823969027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2751447020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99483526,0.0026788244,0.000047965554,0.000033235654,0.00009953121,0.0000839203,0.00034015506,0.00002373109,0.0018573661],"genre_scores_gemma":[0.9989521,0.00033155706,0.0000678096,0.0002459561,0.000014564058,0.0000066763323,0.000050361494,0.000008229936,0.0003227509],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990552,0.00011282103,0.00019196294,0.0002720676,0.0000483333,0.00031963293],"domain_scores_gemma":[0.9989256,0.00007555761,0.00015183861,0.0007296414,0.00005971472,0.000057609355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033081387,0.000115293595,0.0003305006,0.0002630762,0.00039813944,0.00005630229,0.00041487569,0.00013370135,0.00042212202],"category_scores_gemma":[0.00017981653,0.00009516538,0.00008264435,0.00011969936,0.00036732745,0.00023970495,0.00020178044,0.00013617109,0.00011325809],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001533812,0.00010877858,0.015826117,0.000006652689,0.00086452696,0.0000090848025,0.0002679041,0.000004204866,0.97653,0.0002674166,0.00016441643,0.005797474],"study_design_scores_gemma":[0.0005540111,0.00022570822,0.70738184,0.0000054661164,0.00027333654,0.0000034032012,0.00007214515,0.00003310496,0.25242588,0.000073018906,0.03880201,0.00015009963],"about_ca_topic_score_codex":0.0028998626,"about_ca_topic_score_gemma":0.0022905937,"teacher_disagreement_score":0.72410417,"about_ca_system_score_codex":0.000014551631,"about_ca_system_score_gemma":0.000048319536,"threshold_uncertainty_score":0.46219403},"labels":[],"label_agreement":null},{"id":"W2751644231","doi":"10.3390/v9090252","title":"Analysis of Class I Major Histocompatibility Complex Gene Transcription in Human Tumors Caused by Human Papillomavirus Infection","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Major histocompatibility complex; Biology; MHC class I; Antigen processing; Antigen presentation; Antigen; Gene; HPV infection; CD8; Beta-2 microglobulin; Transcription (linguistics); Cancer research; Interferon; Immunology; Cervical cancer; Immune system; Cancer; Genetics; T cell","score_opus":0.051504486313619785,"score_gpt":0.32168477498118764,"score_spread":0.2701802886675678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2751644231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977813,0.0012441382,0.000050816874,0.000027664193,0.0001524117,0.00031441485,0.00014864764,0.00005125337,0.00022936109],"genre_scores_gemma":[0.99898773,0.00006646097,0.000005800609,0.00009224939,0.000008099416,0.0000373391,0.00029754447,0.000017321923,0.0004874392],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998239,0.00047197434,0.0006285746,0.0003287131,0.00005243051,0.000279312],"domain_scores_gemma":[0.9986263,0.00006281056,0.0004488799,0.00079086435,0.00005714746,0.0000139805015],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004205342,0.0002157109,0.0006501768,0.0004427289,0.0007169013,0.000032731154,0.00032400002,0.00021100474,0.0009435239],"category_scores_gemma":[0.000045219902,0.00020985916,0.00023952973,0.00020687054,0.0005442989,0.0002524701,0.00003979624,0.00022200322,0.000025674379],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030050994,0.00037097523,0.14774354,0.000014567458,0.0006615298,0.0000012800803,0.0003249511,0.000013031914,0.8494494,0.00011855393,0.00019848798,0.00080316566],"study_design_scores_gemma":[0.0011891971,0.00015822006,0.54447013,0.00001442571,0.00017401756,7.9623584e-7,0.000018297333,0.000004262715,0.4487051,0.00002653726,0.0051077995,0.00013122403],"about_ca_topic_score_codex":0.019210111,"about_ca_topic_score_gemma":0.0037774774,"teacher_disagreement_score":0.4007443,"about_ca_system_score_codex":0.00011254436,"about_ca_system_score_gemma":0.000026291493,"threshold_uncertainty_score":0.9999697},"labels":[],"label_agreement":null},{"id":"W2757518938","doi":"10.3390/v9100276","title":"Comment: Characterization of Two Historic Smallpox Specimens from a Czech Museum","year":2017,"lang":"en","type":"letter","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Medical Research Council; National Health and Medical Research Council; Natural Sciences and Engineering Research Council of Canada","keywords":"Variola virus; Smallpox; Ancestor; Most recent common ancestor; Czech; Biology; Genome; Evolutionary biology; Genealogy; Phylogenetics; History; Genetics; Archaeology; Gene; Virology; Vaccinia; Philosophy","score_opus":0.04872210803333534,"score_gpt":0.28938289474726453,"score_spread":0.24066078671392918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2757518938","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15830474,0.015570221,0.00035326177,0.75495636,0.019160781,0.0026858766,0.034087155,0.0006548267,0.014226805],"genre_scores_gemma":[0.046197094,0.002662699,0.00012640322,0.8883906,0.0065357517,0.0001811469,0.027590377,0.00028890467,0.028027045],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981022,0.00032307714,0.00042452023,0.0004729846,0.00011006928,0.00056717615],"domain_scores_gemma":[0.9980195,0.00022437045,0.00057752675,0.001048725,0.000100881094,0.000029006676],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00014482932,0.00035988088,0.00067857397,0.000268573,0.00024021952,0.000042757427,0.00089086086,0.00093801826,0.0029030256],"category_scores_gemma":[0.00010609878,0.0003283337,0.00017850072,0.000060753555,0.0003373358,0.00015516048,0.00026160636,0.0014249732,0.0022099025],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055605327,0.00004563863,0.00018839513,0.000028966262,0.00025443188,0.000058497266,0.00008065115,1.0472063e-8,0.44793114,0.000024587438,0.5506756,0.00065649016],"study_design_scores_gemma":[0.00086816616,0.0000838168,0.0009130235,0.00010564453,0.00008069199,0.0000093580275,0.000002419233,2.3159646e-7,0.1185626,0.00008394239,0.879022,0.00026808766],"about_ca_topic_score_codex":0.003170298,"about_ca_topic_score_gemma":0.00006133947,"teacher_disagreement_score":0.32936856,"about_ca_system_score_codex":0.00013700922,"about_ca_system_score_gemma":0.00014650583,"threshold_uncertainty_score":0.99991685},"labels":[],"label_agreement":null},{"id":"W2758094822","doi":"10.3390/v9120388","title":"Stress Granule-Inducing Eukaryotic Translation Initiation Factor 4A Inhibitors Block Influenza A Virus Replication","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Viral replication; Stress granule; Initiation factor; eIF4A; Eukaryotic translation; eIF2; Internal ribosome entry site; Eukaryotic initiation factor; EIF4G; EIF4E; Virology; Protein biosynthesis; Translation (biology); Virus; Cell biology; Molecular biology; Messenger RNA; Biochemistry; Gene","score_opus":0.15335517931687137,"score_gpt":0.3421788573229541,"score_spread":0.18882367800608274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2758094822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973153,0.00028750842,0.0000020688487,0.00052654947,0.00012494776,0.00034108333,0.0008680008,0.0001207597,0.00041382003],"genre_scores_gemma":[0.99899596,0.00025631592,0.000028801553,0.00023680032,0.0003538506,0.00004317147,0.000065830434,0.0000019807237,0.00001728423],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985254,0.00009168391,0.0002799535,0.00041860837,0.00037625313,0.0003081132],"domain_scores_gemma":[0.9990491,0.00028059346,0.0002460252,0.00023389314,0.0000960989,0.000094271556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022725601,0.00017142217,0.00018125033,0.000032297175,0.0011378016,0.00030766832,0.00038404207,0.00010835079,0.000070856375],"category_scores_gemma":[0.00056489115,0.000076391785,0.00007080137,0.00012962102,0.00010220347,0.00080799137,0.00009405131,0.00015868057,0.0000967994],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044365377,0.000060947994,0.044816263,0.000012892502,0.000020244477,0.000003402733,0.00021583217,0.000007567376,0.8988635,0.000025755722,0.00025146967,0.055677745],"study_design_scores_gemma":[0.0001754932,0.00009448515,0.62272215,0.00006811021,0.000012186588,0.0000016939126,0.00007560208,0.00007354995,0.37088323,0.0001345351,0.0055589266,0.00020003127],"about_ca_topic_score_codex":0.0020552634,"about_ca_topic_score_gemma":0.003139212,"teacher_disagreement_score":0.5779059,"about_ca_system_score_codex":0.000041242547,"about_ca_system_score_gemma":0.000013699303,"threshold_uncertainty_score":0.87511647},"labels":[],"label_agreement":null},{"id":"W2759687552","doi":"10.3390/v9100271","title":"Antiviral Properties of Chemical Inhibitors of Cellular Anti-Apoptotic Bcl-2 Proteins","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Academy of Finland; Université de Lille; Ottawa Hospital Research Institute; Ministry of Science, ICT and Future Planning; Helsingin Yliopisto; European Regional Development Fund; Welch Foundation","keywords":"Apoptosis; Transfection; RNA; Biology; Viral replication; Virus; DNA; Virology; DNA damage; Cell biology; Cell culture; Gene; Genetics","score_opus":0.02281479550263658,"score_gpt":0.24155324175754583,"score_spread":0.21873844625490926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2759687552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987914,0.0005448319,0.00016339801,0.000020763187,0.000107491185,0.0001712868,0.000008002695,0.0000049697683,0.00018787672],"genre_scores_gemma":[0.99938715,0.00008304565,0.00024669536,0.000010762347,0.0001286089,0.000005611317,0.000008365593,0.000013039464,0.00011674825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99942005,0.000016101976,0.00018669321,0.0001620762,0.00010724142,0.000107821026],"domain_scores_gemma":[0.99935,0.000001367263,0.00019398036,0.0003731183,0.00005900432,0.000022512517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000078977166,0.000093004135,0.00015037647,0.000023965144,0.00005632463,0.000013886207,0.00016366491,0.00011069689,0.000005296138],"category_scores_gemma":[0.000055441375,0.00007239345,0.00007473236,0.000014444149,0.00017225316,0.000007379206,0.00011571919,0.000032971322,0.000002214501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033967714,0.00007169755,0.0015543841,0.00007916308,0.000021686155,5.9675045e-7,0.000026328646,0.0000029792784,0.9969648,0.000100738696,0.000033499568,0.0011101498],"study_design_scores_gemma":[0.00023965168,0.00010541705,0.0009441344,0.00006611653,0.000014708859,8.3617357e-7,0.000013597463,0.000025881047,0.997506,0.00003169171,0.0009589561,0.00009299058],"about_ca_topic_score_codex":0.00006015393,"about_ca_topic_score_gemma":0.0000032891646,"teacher_disagreement_score":0.0010171592,"about_ca_system_score_codex":0.0000027181652,"about_ca_system_score_gemma":0.00003145401,"threshold_uncertainty_score":0.2952119},"labels":[],"label_agreement":null},{"id":"W2760825408","doi":"10.3390/v9100294","title":"The Luteovirus P4 Movement Protein Is a Suppressor of Systemic RNA Silencing","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Luteovirus; Biology; Potato leafroll virus; Virology; Gene silencing; RNA silencing; Nicotiana benthamiana; Barley yellow dwarf; Plant virus; Virus; Movement protein; Genetics; RNA; RNA interference; Gene","score_opus":0.06501753095423461,"score_gpt":0.2909107353817042,"score_spread":0.22589320442746957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760825408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99620175,0.001386492,3.5665337e-7,0.0007072852,0.00006804373,0.00041543142,0.00043574508,0.000025932826,0.0007589306],"genre_scores_gemma":[0.99844253,0.00072746613,0.00000923917,0.0001657387,0.00011791761,0.00008351338,0.0000010706699,7.9991156e-7,0.00045170516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882907,0.000068305,0.00021071517,0.00019365473,0.00038258018,0.0003156748],"domain_scores_gemma":[0.9992199,0.000257068,0.00021302208,0.00017964526,0.000075695076,0.00005468422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036142633,0.00011455798,0.00017135049,0.0000071949257,0.0011727139,0.00017510526,0.00077859743,0.000041340143,0.00007294962],"category_scores_gemma":[0.00035641794,0.000032350457,0.000069511574,0.00005268018,0.0002026143,0.00016133631,0.0003617357,0.000090986796,0.000057030247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003695629,0.000020609037,0.0006021985,0.000016707196,0.000032547538,0.0000033756426,0.00010251774,3.73217e-7,0.9906619,0.00014565446,0.0017003765,0.0066767517],"study_design_scores_gemma":[0.000076333265,0.00009141191,0.010314012,0.0001300359,0.0000052451333,8.3910066e-7,0.00029260878,0.0000142306635,0.9866889,0.0002226941,0.0020773124,0.00008639106],"about_ca_topic_score_codex":0.0034170672,"about_ca_topic_score_gemma":0.00039340835,"teacher_disagreement_score":0.009711814,"about_ca_system_score_codex":0.000021957898,"about_ca_system_score_gemma":0.000011775391,"threshold_uncertainty_score":0.9019686},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"}],"label_agreement":"agree"},{"id":"W2761481149","doi":"10.3390/v9100297","title":"MicroRNA and mRNA Dysregulation in Astrocytes Infected with Zika Virus","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Research Institute in Oncology and Hematology; Public Health Agency of Canada; CancerCare Manitoba; Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada","keywords":"Zika virus; Flavivirus; Biology; microRNA; Virology; Microcephaly; Neural stem cell; Virus; Transcriptome; Dengue virus; Stem cell; Immunology; Gene; Gene expression; Cell biology; Genetics","score_opus":0.016356849466359066,"score_gpt":0.27935029294298136,"score_spread":0.2629934434766223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761481149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979925,0.0007936915,0.000031735402,0.00025592677,0.0000337276,0.00022511356,0.000013545328,0.00003309461,0.0006206742],"genre_scores_gemma":[0.9990919,0.00007047699,0.00014769181,0.0004716397,0.00010498952,0.000017755816,0.000007208547,0.000014322481,0.000073986346],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994222,0.000014633931,0.00011946014,0.00018282498,0.00010707354,0.00015382426],"domain_scores_gemma":[0.9994386,0.000024285184,0.00009133592,0.000316112,0.000039807634,0.000089869915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000047674275,0.00010756241,0.00019438566,0.00006495305,0.00010899354,0.00007936772,0.000060007118,0.000043507564,0.00008054629],"category_scores_gemma":[0.00008020142,0.00008061662,0.000024006486,0.00003736643,0.000081382495,0.00017584172,0.00003116757,0.000071660426,0.0000150851965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010408787,0.00012548131,0.8580085,0.000043152228,0.000052279516,0.000058314796,0.000068879745,0.0000042082447,0.12337981,0.00020908173,0.00021464538,0.016794752],"study_design_scores_gemma":[0.0028532587,0.00021750371,0.9748,0.00012544554,0.000077459015,0.000011611986,0.000028553457,0.00018774217,0.018741313,0.000027407334,0.002834158,0.00009552878],"about_ca_topic_score_codex":0.00061719294,"about_ca_topic_score_gemma":0.0005205092,"teacher_disagreement_score":0.11679151,"about_ca_system_score_codex":0.000018318353,"about_ca_system_score_gemma":0.00004608974,"threshold_uncertainty_score":0.32874504},"labels":[],"label_agreement":null},{"id":"W2761729382","doi":"10.3390/v9100295","title":"Expression Profiles of Ligands for Activating Natural Killer Cell Receptors on HIV Infected and Uninfected CD4+ T Cells","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University; Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"CD80; CD86; Biology; Major histocompatibility complex; Receptor; Flow cytometry; Natural killer cell; Immunology; Cytotoxic T cell; T cell; Antigen; Molecular biology; Immune system; In vitro; CD40; Biochemistry","score_opus":0.017955231084560923,"score_gpt":0.2619783747302175,"score_spread":0.24402314364565658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761729382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99374896,0.00020673123,0.000032658154,0.000045793644,0.004720473,0.00025222937,0.000007020172,0.000055302244,0.00093083974],"genre_scores_gemma":[0.99172306,0.00007181142,0.000058898786,0.000094860145,0.000037913676,0.00002122505,0.00006295975,0.000016609061,0.007912653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999383,0.000039042152,0.00019984868,0.00019445893,0.000022967692,0.00016069516],"domain_scores_gemma":[0.99909884,0.00023709149,0.00032983016,0.00024457532,0.000077977966,0.000011697999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008106698,0.00014065295,0.0001911396,0.00009737969,0.00042292598,0.000030083747,0.00010360108,0.00016852564,0.00030450674],"category_scores_gemma":[0.00023534117,0.00011003396,0.00005604653,0.00002936506,0.00011107962,0.0002319008,0.00006146935,0.00020127954,0.000057519555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050520943,0.00009079249,0.0023268964,0.000032288088,0.000030327456,1.0763328e-7,0.00017416303,0.0000017335037,0.97658855,0.00004345284,0.018959729,0.0012467236],"study_design_scores_gemma":[0.0011485964,0.0002600892,0.0044126716,0.00011931824,0.000012453778,0.0000013213296,0.00009693114,0.000008821188,0.92962503,0.000006915462,0.064190306,0.00011756961],"about_ca_topic_score_codex":0.000041988464,"about_ca_topic_score_gemma":0.0000017851785,"teacher_disagreement_score":0.04696357,"about_ca_system_score_codex":0.000015238228,"about_ca_system_score_gemma":0.000017381453,"threshold_uncertainty_score":0.44870546},"labels":[],"label_agreement":null},{"id":"W2763931854","doi":"10.3390/v9100287","title":"Sophoraflavenone G Restricts Dengue and Zika Virus Infection via RNA Polymerase Interference","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Zika virus; Virology; Dengue fever; Dengue virus; RNA polymerase; Biology; Flavivirus; Vesicular stomatitis virus; Hepatitis C virus; Flaviviridae; Polymerase; GB virus C; Virus; RNA virus; RNA; Enzyme","score_opus":0.03180964197256566,"score_gpt":0.3146010752281216,"score_spread":0.28279143325555595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763931854","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99529034,0.0024615498,0.00035781864,0.00032701463,0.00028226693,0.00022574214,0.000021996362,0.00006811732,0.0009651501],"genre_scores_gemma":[0.9973713,0.00089122646,0.00002973951,0.0010200125,0.00037767744,0.000027028136,0.0000053264885,0.000020714384,0.00025693708],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991515,0.000028784589,0.0001800071,0.00027934724,0.00014516867,0.000215137],"domain_scores_gemma":[0.9989808,0.00003775099,0.00013553337,0.00056470203,0.000056295707,0.00022489158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000074026895,0.00015813464,0.00024982897,0.00008632944,0.00029650092,0.00013071127,0.00010511788,0.00007938263,0.00013138793],"category_scores_gemma":[0.00024223163,0.00013513144,0.00006489979,0.00004628264,0.000109556975,0.00022103914,0.000097150616,0.00014106836,0.00008058594],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010372913,0.00044700372,0.28053093,0.00013331149,0.00018921439,0.00031117132,0.00013767299,0.0000014295815,0.5177887,0.000374977,0.0019443657,0.19710395],"study_design_scores_gemma":[0.0027745648,0.0005335095,0.8655394,0.00022934988,0.00034621754,0.00005831695,0.000022140312,0.0003490241,0.12476755,0.00031036968,0.0047776476,0.000291934],"about_ca_topic_score_codex":0.005956794,"about_ca_topic_score_gemma":0.00033982538,"teacher_disagreement_score":0.58500844,"about_ca_system_score_codex":0.000025511126,"about_ca_system_score_gemma":0.00006280038,"threshold_uncertainty_score":0.900493},"labels":[],"label_agreement":null},{"id":"W2765096014","doi":"10.3390/v9100303","title":"The Th17 Lineage: From Barrier Surfaces Homeostasis to Autoimmunity, Cancer, and HIV-1 Pathogenesis","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Université de Montréal","funders":"Canadian Institutes of Health Research; Canadian HIV Trials Network, Canadian Institutes of Health Research","keywords":"Autoimmunity; Biology; Immunology; Context (archaeology); Effector; Immunity; Acquired immune system; Immune system","score_opus":0.08281086170101075,"score_gpt":0.3378598518842459,"score_spread":0.2550489901832351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765096014","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0046782675,0.9876694,0.0000018833957,0.0001294275,0.0026064278,0.0006739186,0.0039199176,0.000117704985,0.00020303487],"genre_scores_gemma":[0.00033200879,0.9900424,0.000027414175,0.00022500275,0.00014481902,0.00026298902,0.00033151312,0.00008718388,0.00854666],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970123,0.00078868424,0.0007223435,0.0007233826,0.00005886473,0.00069441594],"domain_scores_gemma":[0.9963062,0.0013437691,0.0006100884,0.0015922595,0.00008640186,0.00006129896],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004327228,0.00072916783,0.001959413,0.0001658433,0.0018712323,0.00022058206,0.0015884113,0.0010180727,0.00059140404],"category_scores_gemma":[0.00028823226,0.0004538366,0.00036360903,0.00013821972,0.0008616155,0.000113066075,0.0010719055,0.000857288,0.0022094564],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047479996,0.000052732405,0.000075205055,0.00040157101,0.0012292111,0.000013134526,0.00014772148,2.188687e-7,0.020746544,0.00003454812,0.0073980605,0.9698536],"study_design_scores_gemma":[0.0003399211,0.00007545174,0.00008827243,0.0015757817,0.0009580913,0.000027404536,0.00008650884,8.481214e-8,0.0034164933,0.000016030654,0.9928564,0.0005595885],"about_ca_topic_score_codex":0.0034738276,"about_ca_topic_score_gemma":0.00074240135,"teacher_disagreement_score":0.9854583,"about_ca_system_score_codex":0.000063836604,"about_ca_system_score_gemma":0.00039210383,"threshold_uncertainty_score":0.9997913},"labels":[],"label_agreement":null},{"id":"W2765723250","doi":"10.3390/v9110314","title":"ABC Assay: Method Development and Application to Quantify the Role of Three DWV Master Variants in Overwinter Colony Losses of European Honey Bees","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Deformed wing virus; Biology; Primer (cosmetics); Honey bee; Virology; Virus; Polymerase chain reaction; Honey Bees; Genetics; Computational biology; Gene; Zoology; Chemistry; Ecology","score_opus":0.08016254476954933,"score_gpt":0.3270424120132255,"score_spread":0.24687986724367617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765723250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964738,0.00009679037,0.00012337147,0.0003057699,0.000016191309,0.00016901258,0.000015525922,0.0000042709817,0.0027952706],"genre_scores_gemma":[0.9991372,0.000016849897,0.0006806649,0.00008675094,0.000039613966,0.000009231542,0.0000018352018,8.3251024e-7,0.000027022166],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993578,0.000113346716,0.00015369678,0.00012743473,0.00013084225,0.00011683113],"domain_scores_gemma":[0.99950016,0.00025523783,0.00008738416,0.0000822944,0.000045364744,0.000029542165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073714537,0.00005981776,0.00010829515,0.000013188782,0.00013351561,0.00005026564,0.00028349218,0.000027108392,0.000068755166],"category_scores_gemma":[0.00012519467,0.000020598318,0.000016027994,0.00006433704,0.0000660188,0.0000667875,0.00017234485,0.000051816758,0.000017827875],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050463266,0.00004220484,0.3095221,0.000010010925,0.000009532875,8.0735674e-7,0.0002982475,0.0000017747403,0.55308086,0.0008056618,0.000027301978,0.13615108],"study_design_scores_gemma":[0.000047310466,0.00006685648,0.8977962,0.000026933849,0.000002604602,6.9878865e-7,0.0000857499,0.00004469691,0.09309662,0.00046254575,0.008321901,0.000047870893],"about_ca_topic_score_codex":0.00167375,"about_ca_topic_score_gemma":0.004359795,"teacher_disagreement_score":0.5882741,"about_ca_system_score_codex":0.000005220255,"about_ca_system_score_gemma":0.000007948133,"threshold_uncertainty_score":0.25302204},"labels":[],"label_agreement":null},{"id":"W2776020489","doi":"10.3390/v10010005","title":"Comparative Analysis of 37 Acinetobacter Bacteriophages","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Université Laval","funders":"","keywords":"Acinetobacter baumannii; Genome; Biology; Acinetobacter; Computational biology; Genetics; DNA sequencing; Sequence analysis; Gene; Bacteria","score_opus":0.045184676062191544,"score_gpt":0.3305338421094104,"score_spread":0.2853491660472188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2776020489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9835676,0.000014363362,0.00002874274,0.00006037533,0.00012871622,0.000058222948,0.000079509584,0.00001372447,0.01604875],"genre_scores_gemma":[0.9985178,0.000024779076,0.00028386648,0.00017035085,0.000021709538,0.000004250582,0.000008167493,0.0000041547733,0.0009649361],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994335,0.000020826637,0.0001662059,0.00017595559,0.00007473308,0.00012876194],"domain_scores_gemma":[0.999242,0.00002736776,0.00020977382,0.0004645739,0.000009315963,0.00004695882],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000049113118,0.000096664386,0.00025992125,0.000043505155,0.00020837363,0.00008149273,0.00029619434,0.00003345619,0.011152407],"category_scores_gemma":[0.000015424059,0.000080705744,0.000118742624,0.000113818845,0.00023190597,0.00050922995,0.00018845456,0.000058437996,0.0004634813],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001730049,0.00005889517,0.04761534,0.0000015209694,0.00025785906,0.0000018096766,0.00028714607,0.00004791181,0.9495623,0.00001605123,0.0010156314,0.001118228],"study_design_scores_gemma":[0.00007642874,0.000022149607,0.85321677,0.0000048409,0.00021603474,7.3409086e-7,0.000029773495,0.00004629465,0.12086396,0.0000041890776,0.025441146,0.00007768548],"about_ca_topic_score_codex":0.0018458647,"about_ca_topic_score_gemma":0.0013893376,"teacher_disagreement_score":0.82869834,"about_ca_system_score_codex":0.00002807895,"about_ca_system_score_gemma":0.0000032415885,"threshold_uncertainty_score":0.9897515},"labels":[],"label_agreement":null},{"id":"W2776100492","doi":"10.3390/v9120389","title":"Implication of Different HIV-1 Genes in the Modulation of Autophagy","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Autophagy; Crosstalk; Cell biology; Immune system; Biology; Human immunodeficiency virus (HIV); Virology; Immunology; Genetics; Apoptosis","score_opus":0.16910599737691973,"score_gpt":0.4343331370597046,"score_spread":0.2652271396827849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2776100492","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010858521,0.9880951,0.000014434784,0.000014559,0.0000547151,0.00066526246,0.000062689716,0.000009355529,0.0002253544],"genre_scores_gemma":[0.030742282,0.9688563,0.00001252406,0.000034094002,0.00010599341,0.00008540598,0.00009955128,0.000017375238,0.000046505458],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990558,0.00008855539,0.00045055756,0.00014605281,0.0001752669,0.000083789586],"domain_scores_gemma":[0.9986006,0.000100172016,0.0005437019,0.00069974235,0.000034230932,0.000021532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011580153,0.00015688318,0.000878363,0.00012835341,0.000024323015,0.000005797848,0.00022337247,0.0001255069,0.000044692333],"category_scores_gemma":[0.00003666507,0.00008606411,0.00024237738,0.000072936535,0.00006187989,0.000036402504,0.00002196446,0.00009324213,0.000011361414],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016242555,0.00020041969,0.0001967564,0.00554304,0.00010455489,0.0000027806786,0.00007096402,4.5642565e-7,0.00023739712,0.00052685046,0.00006284892,0.9930377],"study_design_scores_gemma":[0.000693008,0.00016022673,0.04723516,0.010219172,0.0012213557,0.000016918395,0.000016906168,0.00002355799,0.0028932414,0.0006026492,0.9367141,0.00020366811],"about_ca_topic_score_codex":0.00003019917,"about_ca_topic_score_gemma":0.000002161434,"teacher_disagreement_score":0.99283403,"about_ca_system_score_codex":0.000024120265,"about_ca_system_score_gemma":0.00009774791,"threshold_uncertainty_score":0.35095924},"labels":[],"label_agreement":null},{"id":"W2776188491","doi":"10.3390/v9120393","title":"Biology of Porcine Parvovirus (Ungulate parvovirus 1)","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"National Research, Development and Innovation Office","keywords":"Parvovirus; Biology; Parvoviridae; Ungulate; Virology; Porcine parvovirus; Canine parvovirus; Virus; Ecology","score_opus":0.35407298522500436,"score_gpt":0.42069448696114403,"score_spread":0.06662150173613968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2776188491","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011664388,0.9931398,7.119828e-7,0.000015622729,0.00043029577,0.00046688333,0.0008009818,0.00011808525,0.0038611726],"genre_scores_gemma":[0.0022612214,0.9964861,0.000028951763,0.00005583555,0.0006030852,0.00009316218,0.00009206484,0.0000055843575,0.00037393844],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99776465,0.00021699772,0.0008114812,0.00059018866,0.0001627608,0.0004539314],"domain_scores_gemma":[0.997867,0.00051434105,0.0011381868,0.00028317323,0.000099744524,0.00009754355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030125442,0.0005511808,0.0021798299,0.00006413676,0.0005085096,0.000054208416,0.000830179,0.00047661204,0.00074030063],"category_scores_gemma":[0.0002910582,0.00019040285,0.00068748085,0.00031193742,0.00046653746,0.00013383254,0.00044078584,0.00031116817,0.0007431559],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009252788,0.00007379997,0.0005400563,0.00063662615,0.00017982376,0.0000057362163,0.0000054863085,4.9077958e-8,0.00046587395,0.0007808643,0.0008380376,0.9964644],"study_design_scores_gemma":[0.000052945186,0.00023996913,0.00061672647,0.0010347035,0.00040291523,0.000014765765,0.000008428006,1.2909203e-7,0.000066542874,0.00018360943,0.99697447,0.00040476763],"about_ca_topic_score_codex":0.001514588,"about_ca_topic_score_gemma":0.00061280676,"teacher_disagreement_score":0.9961365,"about_ca_system_score_codex":0.00004514364,"about_ca_system_score_gemma":0.00004224675,"threshold_uncertainty_score":0.9552014},"labels":[],"label_agreement":null},{"id":"W2776608992","doi":"10.3390/v9120387","title":"The Influence of E1A C-Terminus on Adenovirus Replicative Cycle","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Research Manitoba","keywords":"Exon; Biology; Viral replication; Gene; Viral life cycle; Adenovirus genome; RNA splicing; Molecular biology; Adenovirus infection; Adenoviridae; Alternative splicing; Genetics; Genome; Virus; RNA; Genetic enhancement","score_opus":0.030775890433223624,"score_gpt":0.35450223571332945,"score_spread":0.3237263452801058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2776608992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975571,0.00046950314,0.0000027858819,0.00021706965,0.000040865358,0.0001652551,0.000032419754,0.0000076088563,0.0015073837],"genre_scores_gemma":[0.99849874,0.0005313812,0.000018022805,0.00038310772,0.00009940843,0.000038563187,0.000002654295,0.00001861438,0.0004095299],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991026,0.00006660384,0.0001544045,0.00027610414,0.00018211841,0.0002181873],"domain_scores_gemma":[0.99801826,0.000049657192,0.0001751593,0.0016035215,0.00009833959,0.00005503664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024174355,0.00011169223,0.00010243487,0.00002165218,0.00042814706,0.000057344558,0.00085161516,0.00007269298,0.00001029348],"category_scores_gemma":[0.00038536347,0.00007906558,0.00005867636,0.000029893314,0.00044403717,0.0000062158338,0.00020559979,0.00009362184,0.0000619132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014475684,0.000046633177,0.0019488407,0.0000048527704,0.000049791393,0.0000039837378,0.000025612148,0.00009941539,0.98200476,0.0001474316,0.00066959293,0.013551511],"study_design_scores_gemma":[0.00028306342,0.0016602227,0.021825664,0.000013745879,0.0000043896457,0.0000017938322,0.000013689843,0.000004620135,0.9521865,0.00017577696,0.023731997,0.00009850945],"about_ca_topic_score_codex":0.000110151675,"about_ca_topic_score_gemma":0.00022519198,"teacher_disagreement_score":0.029818239,"about_ca_system_score_codex":0.000009527073,"about_ca_system_score_gemma":0.00007384375,"threshold_uncertainty_score":0.32930043},"labels":[],"label_agreement":null},{"id":"W2777894284","doi":"10.3390/v10010004","title":"HIV-1 Subtypes and 5’LTR-Leader Sequence Variants Correlate with Seroconversion Status in Pumwani Sex Worker Cohort","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Seroconversion; Virology; Biology; Genetics; Primer (cosmetics); Population; Human immunodeficiency virus (HIV); Molecular biology; Medicine; Chemistry","score_opus":0.03293154892112427,"score_gpt":0.2853724218277651,"score_spread":0.25244087290664086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2777894284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962532,0.001368721,0.000012936898,0.0001666941,0.0001041308,0.00027082118,0.000107838125,0.000028758846,0.0016868882],"genre_scores_gemma":[0.99563706,0.0005165143,0.000057227557,0.00010146459,0.000008360893,0.000024199417,0.000055900877,0.000012053497,0.0035871917],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904954,0.000086841115,0.000108816566,0.0002948965,0.000042108488,0.00041782146],"domain_scores_gemma":[0.9994436,0.00007352404,0.000066970344,0.00034031546,0.000026706619,0.00004887143],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011311883,0.00013924875,0.00018834634,0.00006829827,0.0003167294,0.000055162924,0.00014454858,0.00012711239,0.00043004943],"category_scores_gemma":[0.00004748338,0.00009943539,0.000015466458,0.00003870865,0.00037109514,0.00024297627,0.00009473026,0.00021609441,0.001557709],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037682414,0.0000776115,0.97648615,0.000008286739,0.00015438432,0.0001470005,0.00032464723,0.0000018768476,0.017938497,0.000047460555,0.0007839137,0.0036533521],"study_design_scores_gemma":[0.0023482137,0.00019137745,0.9666363,0.000079082376,0.000030376616,0.000050050687,0.0002601324,0.000005242516,0.009921672,0.000029463426,0.020293977,0.00015410075],"about_ca_topic_score_codex":0.0016392109,"about_ca_topic_score_gemma":0.0003505279,"teacher_disagreement_score":0.019510064,"about_ca_system_score_codex":0.000042524112,"about_ca_system_score_gemma":0.00008528693,"threshold_uncertainty_score":0.9992197},"labels":[],"label_agreement":null},{"id":"W2778421654","doi":"10.3390/v10010008","title":"RNA Interference Therapies for an HIV-1 Functional Cure","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; McGill University","keywords":"RNA interference; RNA; DNA-directed RNA interference; Human immunodeficiency virus (HIV); Genetic enhancement; Biology; Drug; Viral replication; Computational biology; Gene; Virology; Medicine; Bioinformatics; Virus; Genetics; Pharmacology","score_opus":0.2419246953645125,"score_gpt":0.40712423977512663,"score_spread":0.16519954441061413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2778421654","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015665543,0.9969553,0.00090270647,0.0000107548385,0.00058707525,0.00033866154,0.0005071007,0.000015809605,0.0005259835],"genre_scores_gemma":[0.0002996836,0.9945211,0.00012030019,0.00020033705,0.0012027483,0.00021641079,0.0010312556,0.000047527727,0.0023606778],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99888283,0.00005605282,0.00027191784,0.000497342,0.00007687182,0.00021497511],"domain_scores_gemma":[0.9988593,0.000021824684,0.00025391116,0.00069882546,0.00010196971,0.000064199805],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010796558,0.0003332806,0.00055209023,0.00006251743,0.00015441103,0.00011513545,0.00058159826,0.0003550719,0.00006865394],"category_scores_gemma":[0.00005292838,0.00025651237,0.0003686973,0.000020423762,0.000094209485,0.00001157568,0.00011806636,0.00012640115,0.0001081139],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056420893,0.000054123127,0.000008743996,0.0010129039,0.00032388236,0.000001038227,0.00001572131,4.6337806e-7,0.0020725797,0.0000682788,0.038285833,0.9581],"study_design_scores_gemma":[0.00010924729,0.00040417013,0.0000033980166,0.0009835475,0.000150133,0.000011154377,0.000014123505,9.2107086e-7,0.0010029393,0.000046740533,0.9969566,0.0003170108],"about_ca_topic_score_codex":0.000010605965,"about_ca_topic_score_gemma":0.00003390387,"teacher_disagreement_score":0.9586708,"about_ca_system_score_codex":0.000010902354,"about_ca_system_score_gemma":0.00021277647,"threshold_uncertainty_score":0.99998873},"labels":[],"label_agreement":null},{"id":"W2780594873","doi":"10.3390/v10010010","title":"Genotypic and Phylogenetic Insights on Prevention of the Spread of HIV-1 and Drug Resistance in “Real-World” Settings","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Fonds Wetenschappelijk Onderzoek","keywords":"Phylogenetic tree; Transmission (telecommunications); Genotype; Drug resistance; Resistance (ecology); Phylogenetics; Public health; Human immunodeficiency virus (HIV); Biology; Population; Men who have sex with men; HIV drug resistance; Epidemiology; Virology; Genetics; Environmental health; Medicine; Antiretroviral therapy; Viral load; Ecology; Computer science; Gene; Pathology","score_opus":0.06086755419885072,"score_gpt":0.3514067722061586,"score_spread":0.2905392180073079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2780594873","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022611074,0.97560877,1.4370745e-7,0.000015994665,0.000051920953,0.00058575044,0.00016242641,0.0000039520905,0.00095999305],"genre_scores_gemma":[0.016043175,0.98005843,0.00001657764,0.000006024969,0.0000074899017,0.00004375505,0.000039739138,0.000012010203,0.0037727747],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988491,0.00040764041,0.00031304138,0.00024090888,0.000036912876,0.00015239438],"domain_scores_gemma":[0.9989767,0.00022993359,0.00036715518,0.0003931236,0.000019903731,0.000013160402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014237469,0.00017549997,0.00069298374,0.00016387558,0.00009058237,0.000007235227,0.00019525086,0.00012595371,0.000018863553],"category_scores_gemma":[0.00005995946,0.00010427272,0.00008889792,0.0000804795,0.00034356877,0.000024135707,0.00011345039,0.00018681039,0.000029941195],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020699715,0.0004092109,0.0038106202,0.013262641,0.00077078876,0.000011657992,0.00071952306,1.0721905e-7,0.0014667303,0.0014544168,0.0018080235,0.9760793],"study_design_scores_gemma":[0.0005271889,0.00006822272,0.008898548,0.008953341,0.00018302565,0.00000267731,0.0000067253545,9.5570885e-9,0.001498315,0.00022051093,0.9795367,0.00010471119],"about_ca_topic_score_codex":0.00016167438,"about_ca_topic_score_gemma":0.002128628,"teacher_disagreement_score":0.9777287,"about_ca_system_score_codex":0.000026638805,"about_ca_system_score_gemma":0.000112457776,"threshold_uncertainty_score":0.42521182},"labels":[],"label_agreement":null},{"id":"W2782537156","doi":"10.3390/v10010013","title":"Regulation of CD4 Receptor and HIV-1 Entry by MicroRNAs-221 and -222 during Differentiation of THP-1 Cells","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"THP1 cell line; Biology; Chemokine receptor; Cell culture; Monocyte; Chemokine; Receptor; microRNA; Cellular differentiation; Macrophage; Viral entry; Virus; Cell biology; Viral replication; CXCR4; Cell type; Virology; Immunology; Cell; Genetics; Gene; In vitro","score_opus":0.012964513739752045,"score_gpt":0.24661007067323645,"score_spread":0.2336455569334844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782537156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99746543,0.0018279651,0.000009225491,0.000047091733,0.00006453788,0.0001078412,0.00032739298,0.000006156108,0.00014436817],"genre_scores_gemma":[0.9980106,0.0010750935,0.00003562753,0.0000040308414,0.000007342782,0.0000043452246,0.00008529543,0.0000049317478,0.0007727303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99957424,0.000049489336,0.00012416583,0.000120349454,0.000022692924,0.00010904422],"domain_scores_gemma":[0.9996114,0.00004026865,0.00013967787,0.00016890278,0.000024786503,0.000015003593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004566293,0.00006733323,0.00013343855,0.000039504543,0.00014778844,0.000012514821,0.000060667404,0.00007326408,0.00016513802],"category_scores_gemma":[0.000027351012,0.000055396726,0.000018321063,0.000011005957,0.00018829567,0.0000903326,0.000064354266,0.00004703489,0.000042133404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012209854,0.000068384405,0.09289416,0.00004153966,0.00007721601,2.082438e-7,0.00015278031,6.2744434e-8,0.9037101,0.000026963198,0.0012274567,0.0016790177],"study_design_scores_gemma":[0.0007975178,0.00004623105,0.290247,0.000025735917,0.000013359079,0.0000011753141,0.0000276378,2.7182404e-7,0.70738375,0.000015894428,0.0014088129,0.00003260667],"about_ca_topic_score_codex":0.00013676005,"about_ca_topic_score_gemma":0.000015651767,"teacher_disagreement_score":0.19735284,"about_ca_system_score_codex":0.000008309243,"about_ca_system_score_gemma":0.000008693333,"threshold_uncertainty_score":0.22590129},"labels":[],"label_agreement":null},{"id":"W2783265629","doi":"10.3390/v10010036","title":"Interferons: Reprogramming the Metabolic Network against Viral Infection","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; SAMHD1; Interferon; Viral replication; Immune system; Innate immune system; Reprogramming; Intrinsic immunity; Cell biology; Transcription factor; Virology; Virus; Immunology; Genetics; Gene; RNA","score_opus":0.1212620894779605,"score_gpt":0.3606021485271227,"score_spread":0.2393400590491622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783265629","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001468134,0.9952717,0.000051813262,0.000013135759,0.0016066438,0.0007261989,0.000012286935,0.0002840339,0.0018873623],"genre_scores_gemma":[0.000094580064,0.99624544,0.00003700647,0.0017328347,0.001402085,0.00019107289,0.000005937979,0.000070678245,0.00022037922],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997558,0.0005989755,0.00047557478,0.0006730556,0.00021891341,0.00047551273],"domain_scores_gemma":[0.9983582,0.0004637666,0.00036233795,0.0007373148,0.000017526329,0.00006087794],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034561055,0.00040868632,0.000745973,0.00011791281,0.00038606988,0.00025412807,0.0005937399,0.00020175081,0.000059180726],"category_scores_gemma":[0.0007459793,0.00024436947,0.0004721197,0.00075144024,0.00035185204,0.00019226833,0.00026018065,0.00045744368,0.0009125954],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000037342343,0.00003147771,0.000003378163,0.00040986133,0.000028468767,0.0000034699513,0.000045562127,0.0000014424761,0.00001225618,0.0008793087,0.0032770522,0.995304],"study_design_scores_gemma":[0.000063068845,0.00004418393,0.0000038568387,0.0017313666,0.000110529065,0.00001432799,0.0000039955935,0.0000030957322,0.00016205097,0.00016039566,0.99743193,0.0002711823],"about_ca_topic_score_codex":0.00003922549,"about_ca_topic_score_gemma":0.000038625465,"teacher_disagreement_score":0.9950328,"about_ca_system_score_codex":0.000041582938,"about_ca_system_score_gemma":0.00013722229,"threshold_uncertainty_score":0.9998653},"labels":[],"label_agreement":null},{"id":"W2784453912","doi":"10.3390/v10010012","title":"Sustained IFN-I Expression during Established Persistent Viral Infection: A “Bad Seed” for Protective Immunity","year":2017,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Lymphocytic choriomeningitis; Immunology; Biology; Immune system; Immunity; Virology; Simian immunodeficiency virus; Innate immune system; Virus; Chronic infection; clone (Java method); Viral pathogenesis; Viral replication; CD8; Genetics","score_opus":0.08381462230372427,"score_gpt":0.36676918093512706,"score_spread":0.2829545586314028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784453912","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011852175,0.992876,0.000025928493,0.0000125702245,0.00045377004,0.0039966335,0.00074540416,0.0001336128,0.00057086546],"genre_scores_gemma":[0.0017352294,0.9883683,0.00003193721,0.000007640747,0.00013907452,0.0036144496,0.000861932,0.00006907048,0.0051723653],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976686,0.0006021067,0.00042486194,0.0005560389,0.000065811255,0.0006825539],"domain_scores_gemma":[0.99822503,0.00026214067,0.00043020293,0.00084430416,0.0001757862,0.00006252478],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0003143205,0.000516516,0.0013161583,0.00032062925,0.0014918812,0.00012869012,0.00043004137,0.0006351834,0.0002216538],"category_scores_gemma":[0.0006085476,0.00037098673,0.000915343,0.000096584365,0.00024724196,0.00027396172,0.00047966212,0.00073382555,0.0006116067],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015466432,0.0013497794,0.00017897216,0.024068367,0.0059583327,0.00009107711,0.0006171035,9.843297e-7,0.004938845,0.00005690026,0.002996506,0.95819646],"study_design_scores_gemma":[0.0018210168,0.00063071307,0.0001437365,0.0040249177,0.00057674013,0.00007981957,0.00007006272,7.1272275e-8,0.002304534,0.000023182956,0.98993903,0.00038619785],"about_ca_topic_score_codex":0.00073490373,"about_ca_topic_score_gemma":0.00007275508,"teacher_disagreement_score":0.9869425,"about_ca_system_score_codex":0.0004219832,"about_ca_system_score_gemma":0.00049142167,"threshold_uncertainty_score":0.99987423},"labels":[],"label_agreement":null},{"id":"W2789265346","doi":"10.3390/v10030115","title":"The Bacteriophage Lambda CII Phenotypes for Complementation, Cellular Toxicity and Replication Inhibition Are Suppressed in cII-oop Constructs Expressing the Small RNA OOP","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Lysogenic cycle; Transcription (linguistics); Complementation; Bacteriophage; Molecular biology; ColE1; Plasmid; RNA polymerase; RNA; Genetics; DNA; Gene; Phenotype; Escherichia coli","score_opus":0.034698453040087084,"score_gpt":0.2768345637804183,"score_spread":0.24213611074033123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789265346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734914,0.000053141284,0.0010073767,0.00050923123,0.00016218406,0.00046538087,0.000082268416,0.000023727518,0.00034753807],"genre_scores_gemma":[0.99828726,0.000032583263,0.00068749976,0.0007081943,0.0000970516,0.000064472086,0.000024469024,0.000012120045,0.0000863766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991518,0.000077970595,0.00023614593,0.0002751125,0.00006988456,0.00018908517],"domain_scores_gemma":[0.9993095,0.00016459465,0.00017364121,0.00029562827,0.000024078916,0.000032575703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022143032,0.00010981535,0.00009195837,0.000019268413,0.00064228434,0.0001827222,0.00012915085,0.000038226248,0.00029849776],"category_scores_gemma":[0.000065592394,0.000075723874,0.000026042591,0.00009685966,0.0003730192,0.00029935557,0.000112479516,0.00007490676,0.000028747645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042143707,0.00003061903,0.0014991774,0.0000065543945,0.000004991677,4.2703667e-7,0.00047240523,0.0000025871527,0.9932165,0.00011222624,0.00087656616,0.003735808],"study_design_scores_gemma":[0.00040486225,0.000049782586,0.09568863,0.000037168033,0.000014151722,0.0000041091143,0.00051591254,0.00016421491,0.8819991,0.00032340363,0.020687224,0.0001114694],"about_ca_topic_score_codex":0.00050068443,"about_ca_topic_score_gemma":0.0025926577,"teacher_disagreement_score":0.111217424,"about_ca_system_score_codex":0.00005653465,"about_ca_system_score_gemma":0.0000072741263,"threshold_uncertainty_score":0.49399966},"labels":[],"label_agreement":null},{"id":"W2789336047","doi":"10.3390/v10030100","title":"DNA Vaccine-Encoded Flagellin Can Be Used as an Adjuvant Scaffold to Augment HIV-1 gp41 Membrane Proximal External Region Immunogenicity","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Immunogenicity; Augment; Flagellin; DNA vaccination; Adjuvant; Virology; Biology; Human immunodeficiency virus (HIV); DNA; Computational biology; Genetics; Gene; Antibody; Immunology; Plasmid","score_opus":0.0376533589902037,"score_gpt":0.30120529694731746,"score_spread":0.26355193795711374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789336047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963918,0.00066587806,0.00014741132,0.00087891344,0.0003075178,0.0008198119,0.00023614599,0.00015367694,0.00039888106],"genre_scores_gemma":[0.99501646,0.00008629001,0.00028928785,0.0011100457,0.00016509835,0.00012850949,0.00017545518,0.000039291437,0.0029895424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99767977,0.00036013976,0.00037792354,0.00062632683,0.00014541244,0.0008104161],"domain_scores_gemma":[0.9988814,0.00008401049,0.00010389323,0.0006126618,0.00013289813,0.00018515949],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00028172927,0.00033561,0.00040318424,0.00019740411,0.00041718062,0.000057377587,0.0004776507,0.00020841954,0.0021211354],"category_scores_gemma":[0.00007160995,0.0002695225,0.000119082724,0.00019972198,0.00016570793,0.00018441124,0.0001851193,0.00021725561,0.005551606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002199422,0.0006438858,0.0065134354,0.000012546795,0.000272109,0.000093172675,0.0010674865,0.0000026712544,0.9818842,0.00025645,0.0043905685,0.0026640776],"study_design_scores_gemma":[0.0032291438,0.002544935,0.005950728,0.000062588566,0.00006356267,0.0001241998,0.000170295,0.000005201041,0.9551551,0.000079117664,0.0323113,0.0003038458],"about_ca_topic_score_codex":0.002509216,"about_ca_topic_score_gemma":0.0022917562,"teacher_disagreement_score":0.027920734,"about_ca_system_score_codex":0.00016317003,"about_ca_system_score_gemma":0.0002061966,"threshold_uncertainty_score":0.9999757},"labels":[],"label_agreement":null},{"id":"W2789504137","doi":"10.3390/v10050272","title":"Adaptive Mutations in Influenza A/California/07/2009 Enhance Polymerase Activity and Infectious Virion Production","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University Health Network; Nova Scotia Health Authority; Hospital for Sick Children; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Dalhousie University; Albert-Ludwigs-Universität Freiburg; Public Health Agency; Public Health Agency of Canada; University of Wisconsin-Madison","keywords":"Polymerase; Biology; Virology; Virulence; Influenza A virus; Polymerase chain reaction; Virus; Serial passage; Reverse genetics; Genome; Host adaptation; Gene; Genetics","score_opus":0.07189987975345802,"score_gpt":0.39296761788185525,"score_spread":0.32106773812839723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789504137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962951,0.00089197897,0.00011065973,0.0003269195,0.000117608615,0.0005956454,0.000037939306,0.00010642793,0.0015177262],"genre_scores_gemma":[0.9978896,0.00020506038,0.00018384446,0.0011606152,0.00034299804,0.000101252204,0.0000019321008,0.00002099402,0.0000937424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986857,0.000107586435,0.00021910277,0.00037715057,0.00028217587,0.000328237],"domain_scores_gemma":[0.9992664,0.00011308862,0.000082223116,0.00023603076,0.00019735811,0.00010490448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002643663,0.00017525135,0.0002545754,0.00032307825,0.00024063792,0.000026428375,0.000042710206,0.00008300789,0.00007657589],"category_scores_gemma":[0.001179456,0.0001549319,0.00003195656,0.00047135164,0.0005212985,0.0003685204,0.000078445075,0.00025948454,0.00031931032],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024769718,0.0006838319,0.1447471,0.00012299248,0.00017482271,0.000037709462,0.0025131598,0.000026614798,0.7785267,0.00010785712,0.0011212428,0.06946097],"study_design_scores_gemma":[0.0013756104,0.0010791585,0.21876219,0.00019916234,0.000057922232,0.000033263714,0.00020194576,0.00015325521,0.7687991,0.00029851397,0.008771061,0.0002687947],"about_ca_topic_score_codex":0.0012798327,"about_ca_topic_score_gemma":0.0006238983,"teacher_disagreement_score":0.07401509,"about_ca_system_score_codex":0.00014334422,"about_ca_system_score_gemma":0.00010960473,"threshold_uncertainty_score":0.631794},"labels":[],"label_agreement":null},{"id":"W2789825462","doi":"10.3390/v10030133","title":"Antiviral Defense and Innate Immune Memory in the Oyster","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Marine Bivalve and Aquaculture Studies","field":"Environmental Science","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shell (Canada); Vancouver Island University","funders":"","keywords":"Oyster; Innate immune system; Biology; Pacific oyster; Crassostrea; Immune system; Interferon; Immunology; Virology; Fishery","score_opus":0.04891221244065041,"score_gpt":0.31529785431302315,"score_spread":0.26638564187237274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789825462","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005525218,0.9643165,2.692277e-7,0.00002657425,0.000080817445,0.00031503808,0.000010884776,0.00001247223,0.034684926],"genre_scores_gemma":[0.00037850023,0.9983535,0.00002085585,0.00038170977,0.000104750965,0.00003910723,0.000004484582,0.000014053603,0.0007030541],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989216,0.00018162234,0.00026324642,0.00027921167,0.00015926674,0.00019508717],"domain_scores_gemma":[0.9995271,0.00009124034,0.00010808063,0.00025551178,0.0000023634227,0.000015735035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035176982,0.00024163722,0.0005177343,0.00003240559,0.00009987422,0.000042551183,0.00028047868,0.00008700311,0.0002137118],"category_scores_gemma":[0.00004017603,0.00011932009,0.00012109678,0.00019292765,0.0003194663,0.000096704716,0.00046530933,0.00018494388,0.00071287673],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000051780858,0.000055423934,0.001168268,0.001493197,0.000066090426,0.00003647676,0.0010002434,3.951723e-8,0.000007295296,0.00006823877,0.015038576,0.981061],"study_design_scores_gemma":[0.00005625379,0.0000249718,0.00085503754,0.0006403074,0.00007485482,0.0000118014705,0.000053954263,1.546307e-7,0.0000028139507,0.000041645253,0.99807,0.00016817602],"about_ca_topic_score_codex":0.0003114813,"about_ca_topic_score_gemma":0.0002598054,"teacher_disagreement_score":0.98303145,"about_ca_system_score_codex":0.000022659118,"about_ca_system_score_gemma":0.000005723911,"threshold_uncertainty_score":0.9162826},"labels":[],"label_agreement":null},{"id":"W2790757720","doi":"10.3390/v10020060","title":"High Levels of Dual-Class Drug Resistance in HIV-Infected Children Failing First-Line Antiretroviral Therapy in Southern Ethiopia","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AIDS Vancouver; Simon Fraser University","funders":"Canadian Institutes of Health Research; Simon Fraser University; Michael Smith Health Research BC","keywords":"Genotyping; Cart; Drug resistance; Medicine; HIV drug resistance; Dried blood spot; Regimen; Etravirine; Virology; Drug; Internal medicine; Viral load; Antiretroviral therapy; Human immunodeficiency virus (HIV); Pharmacology; Genotype; Biology; Genetics","score_opus":0.0240682997695202,"score_gpt":0.27634553642590226,"score_spread":0.2522772366563821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790757720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974566,0.00044988774,0.000019348565,0.0010988332,0.00008310936,0.00045070215,0.00007767357,0.00006702868,0.00029678099],"genre_scores_gemma":[0.9937409,0.000150464,0.0014735425,0.00023746608,0.00012990093,0.00001861158,0.000036828995,0.000036286452,0.0041759843],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984923,0.000077653756,0.0004936227,0.0003365266,0.00028122822,0.00031869407],"domain_scores_gemma":[0.99933505,0.000103588245,0.00011918024,0.0002989166,0.00008173985,0.000061495135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002583926,0.00023661116,0.0004763515,0.00031898625,0.000056949808,0.0000132898585,0.00009252254,0.00010843752,0.00022408874],"category_scores_gemma":[0.00009160317,0.00018953225,0.00006362896,0.00052254513,0.00014169278,0.000098016026,0.000038395603,0.00019539532,0.00014086836],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006204723,0.0004485169,0.98232603,0.000037704605,0.000100690755,0.000049246348,0.007273506,0.0000045319935,0.007016455,0.00020938995,0.00040655417,0.0015068725],"study_design_scores_gemma":[0.010736056,0.0003108027,0.8838571,0.00088600797,0.00004390089,0.000004804206,0.00027735802,0.000037477304,0.10118935,0.00024463117,0.0020180906,0.00039443598],"about_ca_topic_score_codex":0.0007167919,"about_ca_topic_score_gemma":0.005382032,"teacher_disagreement_score":0.098468974,"about_ca_system_score_codex":0.00010152305,"about_ca_system_score_gemma":0.00012334292,"threshold_uncertainty_score":0.7728901},"labels":[],"label_agreement":null},{"id":"W2791196424","doi":"10.3390/v10020097","title":"Fowl Adenovirus 4 (FAdV-4)-Based Infectious Clone for Vaccine Vector Development and Viral Gene Function Studies","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; ORFS; Virology; Genome; Plasmid; Gene; Virulence; Viral replication; clone (Java method); Virus; Vector (molecular biology); Viral vector; Genetics; Recombinant DNA; Open reading frame; Peptide sequence","score_opus":0.04324085891613716,"score_gpt":0.3373208742389785,"score_spread":0.29408001532284134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791196424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908587,0.0055322605,0.00269409,0.00009030046,0.00028225465,0.00043996572,0.000027734082,0.000044382603,0.00003035454],"genre_scores_gemma":[0.99579847,0.00026731085,0.0011315779,0.0014865695,0.00082055794,0.00021498217,0.000057915444,0.000048313104,0.00017428256],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987789,0.0000629946,0.000228374,0.00043601842,0.00015204068,0.0003417135],"domain_scores_gemma":[0.9992523,0.00004177279,0.00007391176,0.00027952724,0.00026399348,0.00008850431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029129745,0.00021623647,0.00020104389,0.00010202199,0.00029126788,0.000034052413,0.00011429026,0.00012199852,0.00002453978],"category_scores_gemma":[0.00013992464,0.00019526828,0.00005220845,0.000109988105,0.00011813853,0.000008182884,0.000094379655,0.00006561656,0.000030729283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0044170353,0.00008835288,0.0017019388,0.000041259897,0.000281606,0.0000012517497,0.00006353305,0.00001261653,0.97765654,0.00001796544,0.0019735973,0.013744282],"study_design_scores_gemma":[0.0018617808,0.0061205346,0.0017437927,0.0000116636475,0.000029809366,0.0000034106843,0.000027414086,0.000027894735,0.93031555,0.000059110596,0.05956465,0.00023438103],"about_ca_topic_score_codex":0.000012870485,"about_ca_topic_score_gemma":0.00039838644,"teacher_disagreement_score":0.057591055,"about_ca_system_score_codex":0.00004444484,"about_ca_system_score_gemma":0.00016137336,"threshold_uncertainty_score":0.7962809},"labels":[],"label_agreement":null},{"id":"W2791926554","doi":"10.3390/v10020065","title":"The Biology of Monocytes and Dendritic Cells: Contribution to HIV Pathogenesis","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Université de Montréal","funders":"National Institute on Aging; Canadian Institutes of Health Research","keywords":"Biology; Immunology; Myeloid; Immune system; Context (archaeology); Innate immune system; Viral replication; Virology; Virus","score_opus":0.05011179409811978,"score_gpt":0.3432486445382958,"score_spread":0.293136850440176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791926554","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000789144,0.9968005,0.00001863916,0.000019411887,0.00023140469,0.00055930123,0.0015227685,0.000017286973,0.00004157329],"genre_scores_gemma":[0.0005430699,0.9986695,0.000020546975,0.000021569314,0.000034150835,0.00016522969,0.00022463012,0.000014252714,0.0003070273],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985655,0.00049499335,0.00031667275,0.00026468118,0.000019217041,0.00033893716],"domain_scores_gemma":[0.99854887,0.0008894209,0.00016158885,0.00028786578,0.00007810768,0.000034164445],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022820433,0.00020606813,0.0007007777,0.00010451508,0.00020643756,0.000013500816,0.00020996403,0.00027387508,0.00007094534],"category_scores_gemma":[0.0002540131,0.00011361704,0.00013151587,0.000109504515,0.00039631792,0.000016743146,0.00014424564,0.00011386396,0.002114574],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063398526,0.0000876714,0.00010723244,0.0008573509,0.0009534461,0.000005848004,0.000028709259,1.0390031e-8,0.006054238,0.0013651142,0.004907238,0.9855697],"study_design_scores_gemma":[0.00020853983,0.00026626483,0.000014873832,0.0005798468,0.00024845244,0.000018118808,0.000009087206,1.4446027e-8,0.006997935,0.00003084131,0.9915244,0.00010160393],"about_ca_topic_score_codex":0.000040655028,"about_ca_topic_score_gemma":0.000024066065,"teacher_disagreement_score":0.9866172,"about_ca_system_score_codex":0.00003571813,"about_ca_system_score_gemma":0.00011074157,"threshold_uncertainty_score":0.9986624},"labels":[],"label_agreement":null},{"id":"W2791963372","doi":"10.3390/v10020053","title":"Higher Cytopathic Effects of a Zika Virus Brazilian Isolate from Bahia Compared to a Canadian-Imported Thai Strain","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Consejo Nacional de Ciencia y Tecnología; McGill University","keywords":"Zika virus; Virology; Cytopathic effect; Biology; Virus; Vero cell; Pathogenesis; HEK 293 cells; Cell culture; Microcephaly; RNA; Gene; Genetics; Immunology","score_opus":0.01633169739486714,"score_gpt":0.27858709891522687,"score_spread":0.26225540152035975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791963372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948799,0.0010689565,0.0000676098,0.0007540703,0.0004937169,0.0007604259,0.0008171896,0.00008582335,0.0010722992],"genre_scores_gemma":[0.9855066,0.00001489846,0.00012757276,0.013414164,0.0005421819,0.000047734145,0.000045936424,0.00004254599,0.00025836346],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99845606,0.00007363133,0.00034877457,0.0003951273,0.00026871008,0.00045769857],"domain_scores_gemma":[0.998282,0.00010192095,0.000101755446,0.0005846785,0.00014214001,0.00078748656],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009531779,0.00024108858,0.00054620794,0.00018545453,0.00008596052,0.000031098363,0.0001911087,0.0001239951,0.0017275375],"category_scores_gemma":[0.00014569487,0.00021185465,0.0001364684,0.00028432277,0.000103023005,0.0000775576,0.000038348404,0.00013288914,0.00036464815],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018792113,0.00043308013,0.044505563,0.00020064987,0.0005769879,0.0005106439,0.0012139322,0.0000031571115,0.9208044,0.0004649019,0.018215904,0.011191581],"study_design_scores_gemma":[0.0048148474,0.0012637755,0.86534476,0.0006035552,0.0006467928,0.000005581535,0.00010640422,0.00040759164,0.036192615,0.00030544872,0.08984481,0.00046380164],"about_ca_topic_score_codex":0.20264888,"about_ca_topic_score_gemma":0.12870799,"teacher_disagreement_score":0.8846118,"about_ca_system_score_codex":0.00008998979,"about_ca_system_score_gemma":0.0004531498,"threshold_uncertainty_score":0.999185},"labels":[],"label_agreement":null},{"id":"W2792687861","doi":"10.3390/v10030114","title":"Upregulation of Glucose Uptake and Hexokinase Activity of Primary Human CD4+ T Cells in Response to Infection with HIV-1","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Universidade Federal do Rio de Janeiro; Medical Research Council Canada; National Institute for Health and Care Research; King's College London; King's College Hospital NHS Foundation Trust","keywords":"Hexokinase; Downregulation and upregulation; Glycolysis; GLUT1; Glucose transporter; GLUT3; Biology; Viral replication; GLUT4; Ectopic expression; Enzyme; Cell biology; Molecular biology; Virology; Virus; Biochemistry; Gene; Endocrinology; Insulin","score_opus":0.023313103708538733,"score_gpt":0.28364323253580004,"score_spread":0.2603301288272613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792687861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993593,0.00009967199,0.00003879258,0.000024805304,0.000023455372,0.00021824994,0.00007098478,0.000010236263,0.00015447316],"genre_scores_gemma":[0.9997091,0.000016217284,0.0000689491,0.000016718033,0.0000058087594,0.000012231385,0.000013890428,0.0000052721407,0.00015177051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939585,0.00021278705,0.00011069684,0.00013060085,0.000028658324,0.00012140844],"domain_scores_gemma":[0.99965674,0.000085263506,0.000054093303,0.00014171588,0.00004510913,0.000017093678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021708202,0.000068437956,0.00014586812,0.00015977846,0.000048805992,0.0000029382375,0.000031293323,0.000060940896,0.00007339507],"category_scores_gemma":[0.000029299865,0.000054041284,0.000013731869,0.00012562174,0.00019181859,0.00007657465,0.000035834888,0.0000539066,0.000058078993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004910643,0.00026949754,0.043660987,0.000019036268,0.000036499554,0.0000021418932,0.00029584207,0.000002761921,0.94622433,0.000019660416,0.000106380394,0.0044522197],"study_design_scores_gemma":[0.0007194374,0.00093421066,0.4580118,0.000022564278,0.000005470806,0.0000018592692,0.0000068072795,1.8325271e-7,0.5388552,0.0000064773626,0.0014085537,0.000027403219],"about_ca_topic_score_codex":0.0007412737,"about_ca_topic_score_gemma":0.0006948336,"teacher_disagreement_score":0.41435084,"about_ca_system_score_codex":0.000036385518,"about_ca_system_score_gemma":0.0000431416,"threshold_uncertainty_score":0.22037396},"labels":[],"label_agreement":null},{"id":"W2793461258","doi":"10.3390/v10020056","title":"Virus Infection Triggers MAVS Polymers of Distinct Molecular Weight","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Endoplasmic reticulum; Mitochondrion; Chemistry; Biochemistry","score_opus":0.014038818908207221,"score_gpt":0.2668956857133443,"score_spread":0.2528568668051371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793461258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98872864,0.002481445,0.00032488452,0.000037649188,0.0010766904,0.00009230069,0.000030360607,0.00006763048,0.007160394],"genre_scores_gemma":[0.9979995,0.00013605163,0.000013829896,0.00031749642,0.0000333988,0.000006885349,0.000012547521,0.000015758013,0.0014645561],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916023,0.0001838663,0.00023493767,0.00017032528,0.000027925344,0.00022268994],"domain_scores_gemma":[0.9995165,0.00007174786,0.00010533949,0.00023350243,0.000059337846,0.000013584203],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000105689374,0.00013383233,0.00020204947,0.0001537682,0.000096838354,0.0000068328172,0.00011994348,0.00014545766,0.003718759],"category_scores_gemma":[0.00009929932,0.00011227559,0.0000998997,0.00013542298,0.00046145052,0.00007865921,0.000050719304,0.00011139461,0.0012317749],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076205574,0.000087011744,0.0013037212,0.000007862053,0.00014038805,0.0000021367475,0.00011800157,1.10075966e-7,0.98892665,0.0006454021,0.001934785,0.0060718525],"study_design_scores_gemma":[0.0004891065,0.00045077872,0.004108841,0.000022140159,0.000031733616,0.000017528515,0.000021573396,4.5074225e-7,0.8396541,0.000027740987,0.15506987,0.00010613926],"about_ca_topic_score_codex":0.0012039737,"about_ca_topic_score_gemma":0.000045328747,"teacher_disagreement_score":0.15313508,"about_ca_system_score_codex":0.000021755346,"about_ca_system_score_gemma":0.00004243431,"threshold_uncertainty_score":0.9995459},"labels":[],"label_agreement":null},{"id":"W2794386903","doi":"10.3390/v10020077","title":"Blood Mitochondrial DNA Content in HIV-Exposed Uninfected Children with Autism Spectrum Disorder","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"B.C. Women's Hospital & Health Centre; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; HIV Legal Network; Women's Health Research Institute; SickKids Foundation; University of Toronto; University of British Columbia; Hospital for Sick Children; University of Ottawa; Children's Hospital of Eastern Ontario","funders":"Canadian Institutes of Health Research; Université de Montréal; University of Toronto","keywords":"Mitochondrial DNA; Autism; Autism spectrum disorder; Population; Human immunodeficiency virus (HIV); Immunology; Biology; Medicine; Genetics; Environmental health; Psychiatry; Gene","score_opus":0.02007606673898658,"score_gpt":0.2428045912543028,"score_spread":0.22272852451531622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794386903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972458,0.00064487883,0.000027653727,0.00038954325,0.00019026,0.00047047983,0.00016894561,0.000088713736,0.00077372714],"genre_scores_gemma":[0.99809366,0.000052768057,0.000067174486,0.00012980257,0.00005893456,0.000048507398,0.00022796662,0.000019178477,0.0013019855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988401,0.00015444243,0.0001707775,0.0003050172,0.00004608291,0.000483613],"domain_scores_gemma":[0.9995691,0.000056303794,0.000047087367,0.00026905205,0.000019787449,0.000038665738],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00004464774,0.00018065369,0.00022310784,0.0001417372,0.00014138743,0.00001940821,0.00015253291,0.00012513754,0.0015370895],"category_scores_gemma":[0.000033227596,0.00012553397,0.000040553983,0.00017455855,0.00037533414,0.000065812106,0.00005940359,0.00018512565,0.0033503585],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010721965,0.0014064459,0.6476238,0.0000037108398,0.0009695053,0.000048519763,0.0003375379,6.235485e-7,0.34356168,0.0012721501,0.002611336,0.0010925179],"study_design_scores_gemma":[0.01267092,0.0023070904,0.7016169,0.000038810464,0.00007289975,0.00007613641,0.000045750185,2.911425e-7,0.2668388,0.00007500129,0.016016388,0.00024101514],"about_ca_topic_score_codex":0.0019308919,"about_ca_topic_score_gemma":0.003663844,"teacher_disagreement_score":0.076722875,"about_ca_system_score_codex":0.000032210097,"about_ca_system_score_gemma":0.00008195638,"threshold_uncertainty_score":0.99937564},"labels":[],"label_agreement":null},{"id":"W2794641391","doi":"10.3390/v10040167","title":"Advances in HIV-1 Vaccine Development","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Engineering and Physical Sciences Research Council; Canadian Institutes of Health Research; Seventh Framework Programme; University of California, San Francisco; National Institute of General Medical Sciences; European Federation of Pharmaceutical Industries and Associations","keywords":"HIV vaccine; Immunogen; Human immunodeficiency virus (HIV); AIDS Vaccines; Medicine; Virology; Vaccine efficacy; Clinical trial; Immunology; Vaccine trial; Intensive care medicine; Immune system; Internal medicine","score_opus":0.0626025606915911,"score_gpt":0.3698709526923083,"score_spread":0.3072683920007172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794641391","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000013083495,0.99713635,0.000004655953,0.0000047725357,0.00024667577,0.00040933077,0.00012010478,0.000038326463,0.002026704],"genre_scores_gemma":[0.000004969407,0.9970366,0.000101487,0.00002428594,0.000040523122,0.00023830801,0.0006531211,0.00002320731,0.001877497],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99861366,0.00019564579,0.0004019803,0.00034576727,0.000031253425,0.0004117267],"domain_scores_gemma":[0.9994397,0.00015419349,0.00010829961,0.0002519042,0.000021333635,0.000024577803],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00014373819,0.00028543986,0.0008739047,0.00026174035,0.00008263106,0.000010128312,0.00026051977,0.00025806873,0.001459252],"category_scores_gemma":[0.00005087357,0.00018991026,0.000104383114,0.00018342654,0.00005839843,0.00008009853,0.0001180468,0.00025709663,0.04578627],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016140977,0.00011679609,0.00009034733,0.0013358875,0.00014203148,0.000025094168,0.000033016568,1.0439554e-8,0.0000025750298,0.00002685894,0.006204996,0.99200624],"study_design_scores_gemma":[0.0004065673,0.00006683782,0.000020839052,0.003272867,0.00004901221,0.00002422844,0.000005578605,1.9081803e-9,0.000112696005,0.000005523525,0.9958545,0.00018132316],"about_ca_topic_score_codex":0.0000144621445,"about_ca_topic_score_gemma":0.00015054786,"teacher_disagreement_score":0.9918249,"about_ca_system_score_codex":0.00012395334,"about_ca_system_score_gemma":0.00033418767,"threshold_uncertainty_score":0.99945354},"labels":[],"label_agreement":null},{"id":"W2799629165","doi":"10.3390/v10050217","title":"The Sequence of Two Bacteriophages with Hypermodified Bases Reveals Novel Phage-Host Interactions","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Université Laval; Public Health Agency of Canada; University of Guelph","funders":"","keywords":"Myoviridae; Genome; Biology; Gene; Bacillus subtilis; DNA; Genetics; GC-content; Base pair; genomic DNA; DNA sequencing; Pyrosequencing; Bacteriophage; Bacteria; Escherichia coli","score_opus":0.04555425143653384,"score_gpt":0.31114120746098123,"score_spread":0.2655869560244474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2799629165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99152845,0.000024919429,0.00046434253,0.00026304822,0.0003558266,0.00017933286,0.00014054657,0.00004512332,0.0069983928],"genre_scores_gemma":[0.99534565,0.000038433227,0.0017015769,0.0007162146,0.000118435484,0.00002302649,0.0000044533385,0.000019605752,0.0020326143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907786,0.000041093233,0.00025025857,0.0002520549,0.00013252515,0.00024622557],"domain_scores_gemma":[0.99914813,0.00019198672,0.00017386086,0.00038199476,0.000036767626,0.00006724667],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011490083,0.00015419276,0.0001443613,0.000029250361,0.0004137805,0.000081492304,0.00029737147,0.00002474743,0.0026625504],"category_scores_gemma":[0.00004820829,0.000097949254,0.000053249732,0.00022072789,0.0007591531,0.00054149627,0.0001412638,0.000120131546,0.0005302839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000613509,0.00008273379,0.0012668065,0.0000028108443,0.000022248361,0.0000021984363,0.00015812214,0.00000648757,0.9950638,0.000114037735,0.0011112106,0.0021082084],"study_design_scores_gemma":[0.000536796,0.0003073089,0.090792015,0.00010373768,0.000057793644,0.00012492838,0.0002448415,0.00007613971,0.7162729,0.00003805078,0.19115786,0.0002876511],"about_ca_topic_score_codex":0.002182171,"about_ca_topic_score_gemma":0.0018874817,"teacher_disagreement_score":0.27879092,"about_ca_system_score_codex":0.00006643586,"about_ca_system_score_gemma":0.00001634885,"threshold_uncertainty_score":0.9982492},"labels":[],"label_agreement":null},{"id":"W2800147310","doi":"10.3390/v10040215","title":"Natural Immunity to HIV: A Template for Vaccine Strategies","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Immunity; Human immunodeficiency virus (HIV); HIV vaccine; Natural (archaeology); Virology; Biology; Computational biology; Immunology; Immune system; Vaccine trial","score_opus":0.08902498089009586,"score_gpt":0.3994391705842614,"score_spread":0.31041418969416557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800147310","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010687719,0.9955493,0.000030203677,0.000025441146,0.00055863784,0.0014244231,0.0018386475,0.00008633948,0.00038013398],"genre_scores_gemma":[0.0000826562,0.9932652,0.00016965656,0.00007287522,0.00011692168,0.0006252785,0.0017614758,0.000043986238,0.0038619176],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99845016,0.00024018066,0.0003630286,0.0003695226,0.000031113977,0.0005460132],"domain_scores_gemma":[0.99884117,0.00041940657,0.00012057447,0.00048273374,0.00009042957,0.00004571544],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018630055,0.00038524473,0.0010663568,0.0002249451,0.00027579605,0.000057689853,0.0004404039,0.00031848584,0.0005549226],"category_scores_gemma":[0.00011954032,0.00025254264,0.00033373182,0.00017149882,0.000072800285,0.00009406743,0.00017451882,0.00035954098,0.013532382],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035335185,0.00025757845,0.00000624541,0.0051178215,0.0028216187,0.000019918505,0.00013842079,6.984454e-8,0.00049795123,0.00045272018,0.26724958,0.72308475],"study_design_scores_gemma":[0.0005488368,0.00044059101,0.000008554041,0.0015492935,0.00027890987,0.000044118144,0.00003822409,1.3434414e-8,0.00022741364,0.000035560137,0.99658114,0.0002473338],"about_ca_topic_score_codex":0.00015272398,"about_ca_topic_score_gemma":0.00012818897,"teacher_disagreement_score":0.72933155,"about_ca_system_score_codex":0.000078085206,"about_ca_system_score_gemma":0.00036251117,"threshold_uncertainty_score":0.99999267},"labels":[],"label_agreement":null},{"id":"W2801155269","doi":"10.3390/v10040210","title":"Prior Puma Lentivirus Infection Modifies Early Immune Responses and Attenuates Feline Immunodeficiency Virus Infection in Cats","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institutes of Health","keywords":"Feline immunodeficiency virus; Lentivirus; CATS; Virology; Immune system; Biology; Virus; Viral load; Immunology; Immunodeficiency; Viral disease; Medicine; Internal medicine","score_opus":0.03504151980412654,"score_gpt":0.30876164181152993,"score_spread":0.27372012200740337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801155269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99216366,0.0064744954,0.000040933322,0.00006764849,0.00039325038,0.00034074183,0.000081736005,0.000109760455,0.0003277492],"genre_scores_gemma":[0.9957524,0.0033038068,0.000016550133,0.000041806496,0.000044692482,0.00007841994,0.000042083982,0.000019211202,0.00070101605],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984439,0.00034615299,0.00033053933,0.00036030912,0.00006108173,0.00045802264],"domain_scores_gemma":[0.99930745,0.00019334066,0.00009583944,0.0002745475,0.0001024146,0.000026418562],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037063018,0.00021677972,0.00026637613,0.0004129527,0.00048276878,0.00006133902,0.000088503904,0.00018923868,0.00023309655],"category_scores_gemma":[0.00025849848,0.00018345028,0.000057242083,0.00029863467,0.0005200976,0.00034511273,0.00012521421,0.0002507284,0.0020973724],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009864775,0.00037798972,0.30590987,0.000014589371,0.00010178226,0.000009645594,0.00068015297,0.0000013707913,0.6711638,0.00006408332,0.00012349382,0.020566756],"study_design_scores_gemma":[0.001220168,0.00074655574,0.6399989,0.000040371633,0.000019467554,0.000027113136,0.000023793415,0.0000025913469,0.34982634,0.00006297498,0.007885475,0.0001462092],"about_ca_topic_score_codex":0.03939649,"about_ca_topic_score_gemma":0.0055530607,"teacher_disagreement_score":0.33408907,"about_ca_system_score_codex":0.000082716746,"about_ca_system_score_gemma":0.00006163158,"threshold_uncertainty_score":0.99867964},"labels":[],"label_agreement":null},{"id":"W2801396467","doi":"10.3390/v10050218","title":"Framing the Future with Bacteriophages in Agriculture","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":247,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; European Respiratory Society","keywords":"Agriculture; Biotechnology; Population; Biology; Antimicrobial; Animal husbandry; Business; Microbiology; Ecology; Medicine; Environmental health","score_opus":0.02003365421130389,"score_gpt":0.28330624711713837,"score_spread":0.2632725929058345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801396467","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007234708,0.99680907,0.0000024672981,0.00004236975,0.0004196332,0.00041048045,0.00005246993,0.000031963966,0.001508091],"genre_scores_gemma":[0.000031176518,0.99769473,0.0001273078,0.00028890104,0.0005868578,0.000064875305,0.00002131519,0.000030937772,0.0011539258],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989676,0.00009158808,0.00024729557,0.00034280168,0.00010436939,0.00024638258],"domain_scores_gemma":[0.9993912,0.00005328654,0.00018156829,0.00032676605,0.0000046959285,0.00004247468],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007839147,0.00030909097,0.00046498596,0.00003367221,0.0001497883,0.0001132516,0.0004123065,0.0001981117,0.0024222464],"category_scores_gemma":[0.0000055267283,0.0001375885,0.00013300238,0.0003702128,0.00016000362,0.00023084429,0.00018030431,0.00043668514,0.0015041941],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000068320555,0.000080612204,0.000046584486,0.00074183475,0.00006572395,0.00003788369,0.00027854377,0.0000010204859,0.0011335888,0.0000089172245,0.021455295,0.9761432],"study_design_scores_gemma":[0.00003691057,0.000030382678,0.0016440914,0.0017054945,0.000093272865,0.000079801175,0.000050827795,4.9026212e-8,0.00002707674,0.0000011122232,0.99612516,0.00020579691],"about_ca_topic_score_codex":0.0003572288,"about_ca_topic_score_gemma":0.0032217305,"teacher_disagreement_score":0.97593737,"about_ca_system_score_codex":0.00012574159,"about_ca_system_score_gemma":0.00001655152,"threshold_uncertainty_score":0.99927324},"labels":[],"label_agreement":null},{"id":"W2803826590","doi":"10.3390/v10050258","title":"CRISPR/Cas9 Mutagenesis of UL21 in Multiple Strains of Herpes Simplex Virus Reveals Differential Requirements for pUL21 in Viral Replication","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canada Foundation for Innovation","keywords":"CRISPR; Biology; Herpes simplex virus; Mutagenesis; Viral replication; Virology; Cas9; Virus; Strain (injury); Cell; Genetics; Phenotype; Mutation; Gene","score_opus":0.10659526820503033,"score_gpt":0.3890313555102253,"score_spread":0.2824360873051949,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803826590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99778974,0.0000629317,0.0005985942,0.00003516047,0.00010550952,0.00090909476,0.00024886502,0.00002376119,0.0002263454],"genre_scores_gemma":[0.9985124,0.0000560337,0.0009324425,0.00010515885,0.00009617901,0.0001435591,0.000045945602,0.000027899652,0.00008037931],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849224,0.00006500143,0.0006623401,0.00034695194,0.00018120228,0.00025227485],"domain_scores_gemma":[0.9989818,0.00009917937,0.00022715745,0.00050232717,0.00013004355,0.000059497306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022716707,0.00016422392,0.00043466204,0.00030295987,0.000048790233,0.0000071190616,0.00008493783,0.00011844538,0.00016953085],"category_scores_gemma":[0.00034076071,0.00014729999,0.000104412764,0.00028665102,0.00012985943,0.00013091648,0.000034887624,0.00005100312,0.000009885852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009017462,0.0028262076,0.30160397,0.00025837708,0.00019471784,0.000007868286,0.0005476105,0.000005609834,0.52607715,0.00027175172,0.000248433,0.16705659],"study_design_scores_gemma":[0.00419503,0.0006564502,0.4264297,0.00019006667,0.000092133516,0.000002062504,0.00008485127,0.00021585014,0.56323266,0.00030215923,0.0044695074,0.0001295628],"about_ca_topic_score_codex":0.0028234853,"about_ca_topic_score_gemma":0.0022072482,"teacher_disagreement_score":0.16692702,"about_ca_system_score_codex":0.000103678045,"about_ca_system_score_gemma":0.000062181534,"threshold_uncertainty_score":0.60067195},"labels":[],"label_agreement":null},{"id":"W2804686653","doi":"10.3390/v10050260","title":"Blackcurrant Leaf Chlorosis Associated Virus: Evidence of the Presence of Circular RNA during Infections","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"RNA; Biology; RNase P; Nuclease protection assay; RNA silencing; Virus; RNA-dependent RNA polymerase; Ribonuclease; RNA editing; Virology; Molecular biology; Genetics; Gene; RNA interference","score_opus":0.07746970881928196,"score_gpt":0.29667349001701415,"score_spread":0.2192037811977322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804686653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984471,0.0006786464,6.4042007e-7,0.00017352011,0.00009894405,0.00018261236,0.00025728572,0.000032176973,0.00012907683],"genre_scores_gemma":[0.99891055,0.0008762522,0.0000031190389,0.000040016235,0.00008529503,0.000013729794,0.0000010636735,8.1117366e-7,0.00006916956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876326,0.0001568974,0.00023587875,0.00018969849,0.0004084517,0.00024583508],"domain_scores_gemma":[0.9988177,0.00064059376,0.00017716912,0.00010706431,0.00021638525,0.00004107758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002983644,0.00010211838,0.00018861923,0.000017009863,0.0003467022,0.000020001986,0.0004261122,0.000054857926,0.0001717628],"category_scores_gemma":[0.0019782626,0.000034477718,0.00010572228,0.0006568699,0.00051851204,0.00020174679,0.0002820332,0.00010577717,0.00002280375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023997905,0.000100621655,0.028710311,0.000020129219,0.000040558007,4.3274156e-7,0.00011654106,0.0000047602443,0.9704243,0.000015769434,0.00029615662,0.00024645505],"study_design_scores_gemma":[0.000044528337,0.00014778144,0.33338043,0.00022691989,0.000012051005,6.9815025e-7,0.000059823076,0.000016009622,0.66552407,0.000041000294,0.000485226,0.00006145645],"about_ca_topic_score_codex":0.0029592384,"about_ca_topic_score_gemma":0.0032957168,"teacher_disagreement_score":0.3049002,"about_ca_system_score_codex":0.000026935613,"about_ca_system_score_gemma":0.000015914062,"threshold_uncertainty_score":0.4473503},"labels":[],"label_agreement":null},{"id":"W2807165292","doi":"10.3390/v10070366","title":"Biodiversity, Evolution and Ecological Specialization of Baculoviruses: A Treasure Trove for Future Applied Research","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Entomopathogenic Microorganisms in Pest Control","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"FP7 Ideas: European Research Council","keywords":"Biology; Phylogenetic tree; Phylogenetics; Evolutionary biology; Biodiversity; Ecology; Genome; Gene; Genetics","score_opus":0.05684672637874705,"score_gpt":0.29149301962769025,"score_spread":0.2346462932489432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807165292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978954,0.00022521062,0.000083233965,0.00034560217,0.00013788942,0.00047573386,0.00026132242,0.000038343,0.00053727464],"genre_scores_gemma":[0.9982238,0.000064422726,0.00027271244,0.00020937093,0.0011621859,0.000016182223,0.000018523862,7.840108e-7,0.000032016076],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990615,0.0000952716,0.00015183612,0.00027006815,0.00020047484,0.00022084556],"domain_scores_gemma":[0.999296,0.00028121026,0.000072624134,0.00005310633,0.00024017607,0.000056874673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048981817,0.00009149888,0.00015206196,0.000030012145,0.00029101718,0.000035366127,0.00018328805,0.0001496611,0.00033810822],"category_scores_gemma":[0.00017483349,0.00003887116,0.00004294506,0.00031890563,0.00026694717,0.00007747231,0.00009627943,0.00006766397,0.00003495437],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002000336,0.000110369336,0.010459725,0.000008443887,0.0000127092,3.995296e-7,0.00013606431,1.3479865e-7,0.9684705,0.006466553,0.0032022027,0.010932821],"study_design_scores_gemma":[0.0012976811,0.0028588045,0.58847535,0.0000307403,0.00008508053,0.000007999331,0.0024752712,0.00002843228,0.19466011,0.008366085,0.20127459,0.00043985384],"about_ca_topic_score_codex":0.000091561735,"about_ca_topic_score_gemma":0.00088010496,"teacher_disagreement_score":0.77381045,"about_ca_system_score_codex":0.00004317237,"about_ca_system_score_gemma":0.000014450452,"threshold_uncertainty_score":0.3702048},"labels":[],"label_agreement":null},{"id":"W2808060440","doi":"10.3390/v10060332","title":"Transcriptomic Analysis of the Campylobacter jejuni Response to T4-Like Phage NCTC 12673 Infection","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Alberta Innovates; KU Leuven","keywords":"Campylobacter jejuni; Microbiology; Campylobacter; Biology; Transcriptome; Bacteria; Gene; Genetics; Gene expression","score_opus":0.014541709024766532,"score_gpt":0.2699784038494834,"score_spread":0.25543669482471687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808060440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99774957,0.000004266803,0.00018822671,0.0001903577,0.00049459067,0.00013081572,0.00006276937,0.000024702818,0.0011546904],"genre_scores_gemma":[0.99639684,0.000006451131,0.00008798106,0.001667876,0.000038655526,0.0000072186617,0.000002133021,0.000009668114,0.0017831498],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99923426,0.000119368866,0.0001830306,0.00020022602,0.000104304345,0.00015882666],"domain_scores_gemma":[0.99948275,0.000039190116,0.00006862568,0.0003400976,0.000013632699,0.00005572476],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015439997,0.00010072134,0.00013690717,0.00010760414,0.00014933302,0.000029597124,0.00017691727,0.00004488543,0.007546108],"category_scores_gemma":[0.000030460165,0.00007191874,0.00015801574,0.0009081299,0.00017161755,0.00021147396,0.00008878455,0.00007229971,0.00067655684],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018685665,0.000090098445,0.010616275,0.0000010553605,0.000090942136,3.8208134e-7,0.00065008446,0.000059479407,0.9851289,0.000003116181,0.0021834066,0.0009894115],"study_design_scores_gemma":[0.00010485948,0.00008284613,0.66051596,0.000006497159,0.00019499329,0.0000017076229,0.000019950538,0.000028236835,0.14812566,0.0000030312588,0.19083859,0.00007763776],"about_ca_topic_score_codex":0.0046673706,"about_ca_topic_score_gemma":0.009434605,"teacher_disagreement_score":0.83700323,"about_ca_system_score_codex":0.00010417331,"about_ca_system_score_gemma":0.0000075648,"threshold_uncertainty_score":0.9933611},"labels":[],"label_agreement":null},{"id":"W2808122217","doi":"10.3390/v10060330","title":"Host Long Noncoding RNA lncRNA-PAAN Regulates the Replication of Influenza A Virus","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Key Research and Development Program of China; National Infrastructure for Microbiological Resources; National Natural Science Foundation of China","keywords":"Biology; Influenza A virus; RNA; RNA polymerase; Viral replication; Long non-coding RNA; Polymerase; Virology; Gene silencing; RNA-dependent RNA polymerase; Virus; RNA interference; Gene; Genetics","score_opus":0.03351091557824063,"score_gpt":0.3368861385957146,"score_spread":0.30337522301747394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808122217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926898,0.001491934,0.0038213942,0.00013277958,0.00013318357,0.00031387026,0.000022566619,0.00002234696,0.0013721642],"genre_scores_gemma":[0.99797255,0.00027342513,0.00026093159,0.00088420295,0.00034864515,0.00003388536,0.000014062329,0.000032766755,0.00017952743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988178,0.00008213056,0.00024262941,0.00039177062,0.00022378047,0.0002419148],"domain_scores_gemma":[0.9985084,0.00002256516,0.0001406617,0.0010544276,0.00021642532,0.00005755132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037839962,0.00012890685,0.00011830584,0.00006323759,0.000144543,0.000032697422,0.00036924914,0.00014574574,0.00006304292],"category_scores_gemma":[0.00032161747,0.000102118436,0.00007730976,0.0002194234,0.00025129388,0.000007232354,0.00021455777,0.00010886848,0.00003951854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012448533,0.000024587365,0.00014161605,0.000010708992,0.000058157148,0.0000011002996,0.00006477636,0.000015647856,0.9948942,0.0002011115,0.0010473595,0.003416224],"study_design_scores_gemma":[0.00025792667,0.00026695512,0.0012754349,0.000028856466,0.000018037374,0.0000086008995,0.00003144291,0.00006796509,0.957986,0.000074354284,0.039869174,0.00011527487],"about_ca_topic_score_codex":0.00025832938,"about_ca_topic_score_gemma":0.00019623063,"teacher_disagreement_score":0.038821816,"about_ca_system_score_codex":0.000024234672,"about_ca_system_score_gemma":0.0000986162,"threshold_uncertainty_score":0.4164269},"labels":[],"label_agreement":null},{"id":"W2808351884","doi":"10.3390/v10060324","title":"Production of Bacteriophages by Listeria Cells Entrapped in Organic Polymers","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Lytic cycle; Myoviridae; Siphoviridae; Bacteriophage; Listeria; Microbiology; Titer; Chemistry; Phage therapy; Listeria monocytogenes; Biology; Bacteria; Virology; Virus; Biochemistry; Escherichia coli; Gene","score_opus":0.009685514060545143,"score_gpt":0.2373317015630487,"score_spread":0.22764618750250357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808351884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978997,0.000028910525,0.000011873802,0.00008322055,0.00066912785,0.000104009254,0.000018155184,0.000018894596,0.0011660756],"genre_scores_gemma":[0.9972797,0.00005065508,0.00011083147,0.00020100265,0.00006194263,0.000003837244,0.0000038676717,0.000011499398,0.002276657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99937534,0.000029701778,0.00017920407,0.00019844237,0.0000611102,0.00015618729],"domain_scores_gemma":[0.9997171,0.00000898119,0.00007735955,0.00015732863,0.0000052497535,0.000033975088],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000053821474,0.00008665962,0.000099905265,0.00003174241,0.00004293064,0.00001716298,0.000109113265,0.000039001872,0.02429944],"category_scores_gemma":[0.000011000138,0.000081860824,0.000023739303,0.00018521241,0.0001888085,0.0002841316,0.000065300075,0.00005082369,0.00055804936],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025162297,0.00008606439,0.0011148833,0.0000037523096,0.0000039655883,5.3088525e-7,0.00029994766,4.026151e-7,0.99199814,7.351027e-7,0.003958311,0.0025081332],"study_design_scores_gemma":[0.00009410887,0.000065337255,0.041526876,0.000013094909,0.000005024919,0.000003035789,0.00005587176,0.0000014082252,0.9096424,0.0000023508671,0.048513543,0.00007695983],"about_ca_topic_score_codex":0.0011824009,"about_ca_topic_score_gemma":0.0005174575,"teacher_disagreement_score":0.08235572,"about_ca_system_score_codex":0.00005199845,"about_ca_system_score_gemma":0.000005655396,"threshold_uncertainty_score":0.9765925},"labels":[],"label_agreement":null},{"id":"W2809308879","doi":"10.3390/v10060336","title":"Harnessing T Follicular Helper Cell Responses for HIV Vaccine Development","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Germinal center; Immunology; Vaccination; HIV vaccine; Biology; Virology; Antibody; Affinity maturation; B cell; Vaccine trial","score_opus":0.08960161079614408,"score_gpt":0.3625838474656765,"score_spread":0.2729822366695324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809308879","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017347722,0.9973117,0.00012350909,0.000016351987,0.00036525223,0.0011584063,0.00055077294,0.00007897474,0.00022155851],"genre_scores_gemma":[0.000013684672,0.97691554,0.00088311813,0.00007050981,0.00011142109,0.00081674976,0.0014483233,0.000071909395,0.019668737],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979133,0.00035275347,0.0005141539,0.0005458951,0.000050995634,0.00062290387],"domain_scores_gemma":[0.9986838,0.0005403207,0.0002049597,0.00043012254,0.00008942305,0.000051361465],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033941842,0.00045909174,0.0011447587,0.00027072828,0.0004174049,0.00004617064,0.00033840185,0.00044962147,0.0007359591],"category_scores_gemma":[0.00013637969,0.00031126098,0.00035136042,0.0001419302,0.000079325444,0.00006403867,0.00015042894,0.00022191061,0.0130871665],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032281366,0.000447059,0.000033575037,0.0072526108,0.0017439813,0.000044377408,0.00015035899,2.69434e-8,0.0007019187,0.00003100062,0.09270361,0.89656866],"study_design_scores_gemma":[0.0009573222,0.00015509015,0.000005720731,0.0023841436,0.0003819305,0.00003355371,0.0000118946255,1.5914495e-8,0.006102041,0.000003980314,0.9896404,0.00032388087],"about_ca_topic_score_codex":0.000012009108,"about_ca_topic_score_gemma":0.000009630275,"teacher_disagreement_score":0.89693683,"about_ca_system_score_codex":0.0001431313,"about_ca_system_score_gemma":0.00078567344,"threshold_uncertainty_score":0.99993396},"labels":[],"label_agreement":null},{"id":"W2809663289","doi":"10.3390/v10060338","title":"Identification and Characterization of Type IV Pili as the Cellular Receptor of Broad Host Range Stenotrophomonas maltophilia Bacteriophages DLP1 and DLP2","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Stenotrophomonas maltophilia; Pilus; Microbiology; Biology; Host (biology); Identification (biology); Stenotrophomonas; Bacteria; Genetics; Gene; Pseudomonas aeruginosa; Escherichia coli; Pseudomonas; Ecology","score_opus":0.012589026532196654,"score_gpt":0.23811663566210037,"score_spread":0.22552760912990372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809663289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999067,0.00007866239,0.000021893342,0.00015193736,0.00026675436,0.00018987591,0.00006299274,0.000011053559,0.00014981262],"genre_scores_gemma":[0.9983763,0.0004889233,0.000052384385,0.00013908204,0.000063266125,0.000004997017,0.000011572657,0.0000116741285,0.0008517771],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993452,0.00004916664,0.00022979127,0.00018711484,0.00008865721,0.00010010063],"domain_scores_gemma":[0.9995184,0.000025698417,0.00018765194,0.00020086147,0.000032211006,0.00003520632],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000096847594,0.00009524473,0.0001235277,0.000028213957,0.00011443561,0.000036323567,0.00010753265,0.000047268666,0.001596717],"category_scores_gemma":[0.00002533979,0.00007328696,0.000021942698,0.00013858656,0.000433822,0.00030742574,0.00010361455,0.000050155133,0.00015669022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000625145,0.000038202867,0.0043908814,0.000015106978,0.00001019063,2.81525e-7,0.00053304416,7.716565e-8,0.9924397,0.000018588677,0.00006592307,0.002425495],"study_design_scores_gemma":[0.00009343152,0.00010538399,0.46074665,0.000016966613,0.000017082539,0.000002757624,0.00004237479,0.00001009457,0.53028476,0.000006377781,0.008619474,0.00005467936],"about_ca_topic_score_codex":0.00046060525,"about_ca_topic_score_gemma":0.000035740253,"teacher_disagreement_score":0.46215495,"about_ca_system_score_codex":0.00001649104,"about_ca_system_score_gemma":0.0000050105655,"threshold_uncertainty_score":0.999316},"labels":[],"label_agreement":null},{"id":"W2809929835","doi":"10.3390/v10070348","title":"Identification of Novel HIV-1 Latency-Reversing Agents from a Library of Marine Natural Products","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AIDS Vancouver; University of British Columbia; Simon Fraser University","funders":"Wellcome Trust; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"Panobinostat; Biology; Human immunodeficiency virus (HIV); Histone deacetylase; Chemistry; Virology; Biochemistry; Histone; Gene","score_opus":0.03368762841724393,"score_gpt":0.27919553134165065,"score_spread":0.24550790292440672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809929835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977456,0.00076649885,0.000014643662,0.00013421167,0.00027711943,0.00013787896,0.00045473152,0.000021763652,0.00044759302],"genre_scores_gemma":[0.997388,0.000053197065,0.00032179922,0.000030479865,0.00003216088,0.0000036752424,0.00037502844,0.0000069867056,0.0017886896],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994565,0.000043492404,0.00018784005,0.00015342672,0.000032065742,0.00012662396],"domain_scores_gemma":[0.99958116,0.000043348027,0.00010156111,0.00020562083,0.000059130423,0.000009199055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004557839,0.00006582946,0.00012362227,0.00007323406,0.000054365635,0.000005011288,0.00012636269,0.000051030744,0.00067992613],"category_scores_gemma":[0.00006756866,0.000052878957,0.000027897693,0.00011903767,0.00020572059,0.00016680855,0.00010246968,0.00006209063,0.00057810894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001872102,0.0002728781,0.022610366,0.00001593634,0.00016540375,0.0000011214178,0.00022432004,1.1597835e-7,0.96901494,0.00006545392,0.004973042,0.0024691923],"study_design_scores_gemma":[0.00069631,0.00008078738,0.10036687,0.000024437011,0.000020707856,0.0000016754155,0.000030739233,0.0000032131848,0.89218575,0.00003376249,0.0065135527,0.00004219473],"about_ca_topic_score_codex":0.0002916651,"about_ca_topic_score_gemma":0.000012890986,"teacher_disagreement_score":0.0777565,"about_ca_system_score_codex":0.000008128877,"about_ca_system_score_gemma":0.000040691786,"threshold_uncertainty_score":0.74447143},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"medium"}],"label_agreement":"agree"},{"id":"W2885218986","doi":"10.3390/v10080419","title":"Swine Influenza Virus Induces RIPK1/DRP1-Mediated Interleukin-1 Beta Production","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inflammasome; Mitochondrial fission; Cell biology; Phosphorylation; Biology; RIPK1; Chemistry; Inflammation; Mitochondrion; Programmed cell death; Immunology; Necroptosis; Apoptosis; Biochemistry","score_opus":0.022048957046313274,"score_gpt":0.2813524528398392,"score_spread":0.2593034957935259,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885218986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99631345,0.0009919391,0.00002638424,0.0001179446,0.00067887804,0.00016305274,0.000018271729,0.000045254477,0.0016448463],"genre_scores_gemma":[0.9960084,0.00021103842,0.00007889829,0.002171642,0.000966789,0.000024871366,0.00009714959,0.000031752526,0.0004094762],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989535,0.00004926414,0.00024820396,0.0003593644,0.00011612743,0.0002735113],"domain_scores_gemma":[0.9992878,0.00000633729,0.00010025655,0.00040827694,0.00014859514,0.000048738646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013822055,0.00018355087,0.0001365945,0.00008097959,0.00012915116,0.000035116445,0.00021700135,0.0001569376,0.00012665469],"category_scores_gemma":[0.00020083346,0.00016770832,0.00006424846,0.00015730974,0.00020568812,0.00001898686,0.00012210367,0.0000978235,0.00038552744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001566557,0.000060944814,0.0025273801,0.000008040901,0.000071129456,9.010422e-7,0.00015794975,0.0000021607896,0.9865518,0.000017366508,0.0076366654,0.002809008],"study_design_scores_gemma":[0.00025530034,0.00027309073,0.0029783666,0.000010927331,0.0000122974025,0.0000033507292,0.00008666695,0.0000013456846,0.6823325,0.000019380917,0.31386834,0.00015842592],"about_ca_topic_score_codex":0.00010500233,"about_ca_topic_score_gemma":0.00014301181,"teacher_disagreement_score":0.30623168,"about_ca_system_score_codex":0.000011617319,"about_ca_system_score_gemma":0.00006159696,"threshold_uncertainty_score":0.6838947},"labels":[],"label_agreement":null},{"id":"W2885908315","doi":"10.3390/v10080401","title":"The ND10 Complex Represses Lytic Human Herpesvirus 6A Replication and Promotes Silencing of the Viral Genome","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"European Research Council; Research Councils UK; Meningitis Research Foundation","keywords":"Lytic cycle; Biology; Gene silencing; Viral replication; Virology; Virus; Human cytomegalovirus; Genome; Cell biology; Gene; Genetics","score_opus":0.07515170036748606,"score_gpt":0.364796995259582,"score_spread":0.2896452948920959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885908315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939124,0.0010869887,0.000010862617,0.00083602604,0.000048944024,0.0006765695,0.000021139593,0.000050555762,0.0033565352],"genre_scores_gemma":[0.99808985,0.00020991001,0.00009141166,0.0005477152,0.00032463967,0.000035246947,0.0000035453643,0.000028692717,0.0006689844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840117,0.000104290004,0.00038400534,0.000390777,0.0004063872,0.0003134041],"domain_scores_gemma":[0.9980565,0.00020116841,0.00017338188,0.0012507538,0.00022633416,0.00009186459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061981316,0.00015286569,0.000256257,0.00007127596,0.0007488629,0.000080267906,0.00030554456,0.0000755717,0.00018268819],"category_scores_gemma":[0.0004562924,0.0000847353,0.00007924026,0.0002717733,0.0009439724,0.00010766445,0.00025669325,0.0002162542,0.00004310378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016161478,0.00008467741,0.012293404,0.00008910369,0.00007302804,0.0000021599244,0.00070329383,4.6187037e-7,0.9757127,0.0015130304,0.00090007385,0.00846642],"study_design_scores_gemma":[0.00086472125,0.0005777258,0.37524223,0.00015774868,0.000097417054,0.000039219463,0.0002856409,0.00021719327,0.49731457,0.0013597555,0.1236471,0.00019666522],"about_ca_topic_score_codex":0.0010731358,"about_ca_topic_score_gemma":0.00034458502,"teacher_disagreement_score":0.47839817,"about_ca_system_score_codex":0.00005417915,"about_ca_system_score_gemma":0.000105177314,"threshold_uncertainty_score":0.5759724},"labels":[],"label_agreement":null},{"id":"W2886582879","doi":"10.3390/v10080421","title":"Going (Reo)Viral: Factors Promoting Successful Reoviral Oncolytic Infection","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Oncolytic virus; Biology; Viral replication; Virus; Virotherapy; Viral infection; Cancer; Virology; Drug development; Drug; Computational biology; Pharmacology; Genetics","score_opus":0.07632210373332633,"score_gpt":0.3942724946398095,"score_spread":0.3179503909064832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886582879","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07695021,0.92094624,0.000020765745,0.000004072089,0.0004488603,0.0009501358,0.00007706597,0.00008946455,0.0005131971],"genre_scores_gemma":[0.0019694606,0.99507594,0.000042139953,0.000092964714,0.0015158013,0.00013629491,0.00036314016,0.00020476202,0.0005995111],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968503,0.00052525394,0.0006550057,0.00092897407,0.0003657426,0.0006747318],"domain_scores_gemma":[0.9983258,0.00006965461,0.00043370092,0.0008761752,0.0001215276,0.00017311815],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005987928,0.0006474142,0.0009496531,0.0002748145,0.0002514911,0.00014616492,0.0005637303,0.0006733388,0.00012141623],"category_scores_gemma":[0.0003426145,0.0005409171,0.00055173895,0.00036584964,0.0001914827,0.000017375642,0.00035500963,0.00045910478,0.00038419222],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003679334,0.00030243193,0.0013616423,0.011542253,0.0011167271,0.000024259722,0.000103591956,0.000003420394,0.015101712,0.000014553109,0.0044205147,0.96564096],"study_design_scores_gemma":[0.00020279849,0.002277846,0.000009677144,0.0019610128,0.00019271305,0.000015963105,0.0000037019354,0.0000034510979,0.0222997,0.0000096431795,0.97243315,0.00059036765],"about_ca_topic_score_codex":0.00011360016,"about_ca_topic_score_gemma":0.00028387835,"teacher_disagreement_score":0.96801263,"about_ca_system_score_codex":0.00015223087,"about_ca_system_score_gemma":0.00066047633,"threshold_uncertainty_score":0.99970424},"labels":[],"label_agreement":null},{"id":"W2888246898","doi":"10.3390/v10080437","title":"Shell-Less Egg Syndrome (SES) Widespread in Western Canadian Layer Operations Is Linked to a Massachusetts (Mass) Type Infectious Bronchitis Virus (IBV) Isolate","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; University of Calgary","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Virology; Infectious bronchitis virus; Bronchitis; Avian infectious bronchitis virus; Virus; Coronavirus disease 2019 (COVID-19); Biology; Medicine; Infectious disease (medical specialty); Internal medicine; Disease","score_opus":0.047284178644514126,"score_gpt":0.27426565067037134,"score_spread":0.22698147202585722,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888246898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949917,0.00011437904,0.000010015916,0.0014681421,0.00045864092,0.00041644642,0.00024962152,0.00014521107,0.0021458392],"genre_scores_gemma":[0.9929809,0.00010339107,0.00007773994,0.005893357,0.0002801866,0.00006770071,0.000011104246,0.0000060387533,0.0005796119],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998291,0.00010685972,0.0003326858,0.00049497123,0.00017995952,0.00059448194],"domain_scores_gemma":[0.9992296,0.00013080014,0.000047055622,0.00013908498,0.000169834,0.000283606],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001635124,0.00027549246,0.00030417167,0.00012423434,0.0006631526,0.00019360815,0.00028926737,0.0001937786,0.0010533644],"category_scores_gemma":[0.00015307199,0.00014507468,0.00007056873,0.0010649847,0.00013198014,0.0003101574,0.00011934841,0.0002203074,0.0026186407],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000645785,0.00017524208,0.64584917,0.000008855061,0.000107936154,0.0000773761,0.0012272347,0.00009091599,0.34052804,0.00017978954,0.0054172887,0.0062736026],"study_design_scores_gemma":[0.0002256524,0.0013733614,0.8488113,0.000089300374,0.000032830776,0.00005451327,0.00025424967,0.000056413268,0.00418401,0.00016275706,0.14415199,0.0006036191],"about_ca_topic_score_codex":0.44084933,"about_ca_topic_score_gemma":0.94410664,"teacher_disagreement_score":0.5032573,"about_ca_system_score_codex":0.00020738726,"about_ca_system_score_gemma":0.000061078536,"threshold_uncertainty_score":0.9998598},"labels":[],"label_agreement":null},{"id":"W2888657086","doi":"10.3390/v10080440","title":"The Diverse Roles of microRNAs at the Host–Virus Interface","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Canada Research Chairs; McGill University","keywords":"Biology; microRNA; Virus; Gene; Viral replication; Viral pathogenesis; RNA; Virology; Gene expression; Regulation of gene expression; Genetics; Computational biology","score_opus":0.03731707775036657,"score_gpt":0.32790484332541026,"score_spread":0.2905877655750437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888657086","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0050937133,0.9937281,0.000014188922,0.00001211243,0.00024975336,0.00041005918,0.0003198006,0.000007832888,0.0001644275],"genre_scores_gemma":[0.00023417329,0.99816215,0.00001590236,0.000054333243,0.0003205244,0.00003485112,0.00008115374,0.000042447748,0.0010544749],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987721,0.0002123442,0.00036542566,0.00032038262,0.00013100519,0.00019878261],"domain_scores_gemma":[0.99847615,0.00007523666,0.00044316088,0.0008835492,0.00008023962,0.000041677496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021958264,0.00027316486,0.00036305524,0.000026946622,0.00020854754,0.000034470897,0.00064818043,0.0002305629,0.00006124192],"category_scores_gemma":[0.00011556172,0.0001425208,0.00036835385,0.00008370952,0.0004660939,0.0000024414849,0.0006460245,0.000091428454,0.0001844013],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020822835,0.0001255929,0.000032681164,0.0036415416,0.0017307794,0.0000035011012,0.00010321598,0.0000030975584,0.37856805,0.000072892275,0.15174194,0.46376848],"study_design_scores_gemma":[0.0000614039,0.00004281782,0.000010507102,0.0006291489,0.00028463625,0.000008986212,0.000015897389,2.0170047e-7,0.08257496,0.000004209785,0.9162175,0.00014970767],"about_ca_topic_score_codex":0.00002336925,"about_ca_topic_score_gemma":0.00023133165,"teacher_disagreement_score":0.7644756,"about_ca_system_score_codex":0.000037339018,"about_ca_system_score_gemma":0.00012867204,"threshold_uncertainty_score":0.58118296},"labels":[],"label_agreement":null},{"id":"W2889172325","doi":"10.3390/v10090464","title":"Transcriptome Analysis and In Situ Hybridization for FcaGHV1 in Feline Lymphoma","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Australian Companion Animal Health Foundation; Winn Feline Foundation; Morris Animal Foundation","keywords":"Biology; Lytic cycle; Feline immunodeficiency virus; Lymphoma; Transcriptome; Virology; CATS; Gene; In situ hybridization; Virus; Cancer research; Molecular biology; Immunology; Genetics; Gene expression; Viral disease; Lentivirus; Medicine","score_opus":0.02177007884923979,"score_gpt":0.3013999962688723,"score_spread":0.2796299174196325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889172325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99741834,0.00066480035,0.00080628245,0.00037253744,0.000044984576,0.00019727358,0.00001856112,0.000020920632,0.00045630458],"genre_scores_gemma":[0.9977838,0.00025144118,0.00018830466,0.0015773389,0.00006393828,0.00002205768,0.000030505615,0.000010163766,0.00007246861],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999415,0.00001540543,0.0001756639,0.00016520031,0.00008057472,0.00014818113],"domain_scores_gemma":[0.9997804,0.00002308979,0.000035051806,0.00008128288,0.000041595154,0.000038569982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011958273,0.000074362804,0.00022345995,0.00033166725,0.000025921607,0.000010979277,0.000025454228,0.00005319267,0.00003133593],"category_scores_gemma":[0.000072673036,0.00006838857,0.000047188045,0.0007111706,0.00004061792,0.00007897047,0.0000045975085,0.000024586709,0.0000033822282],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016549304,0.0004088042,0.7946454,0.00007641817,0.00032192213,0.000012833997,0.0015394468,0.00004688821,0.17365263,0.00014517542,0.0016376273,0.025857896],"study_design_scores_gemma":[0.014547242,0.0006087842,0.9188425,0.00009749017,0.0007092669,0.00000206102,0.0007314856,0.0025916235,0.047690846,0.00042600158,0.013467641,0.00028505962],"about_ca_topic_score_codex":0.0006775506,"about_ca_topic_score_gemma":0.007754294,"teacher_disagreement_score":0.12596178,"about_ca_system_score_codex":0.000071718954,"about_ca_system_score_gemma":0.00004470362,"threshold_uncertainty_score":0.43270782},"labels":[],"label_agreement":null},{"id":"W2890511793","doi":"10.3390/v10090471","title":"Antiviral Activity of Fermented Ginseng Extracts against a Broad Range of Influenza Viruses","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Ginseng Biological Effects and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Nursing Research; National Institutes of Health","keywords":"Ginseng; Biology; Virus; Fermentation; Microbiology; Virology; Influenza A virus; Traditional medicine; Food science; Medicine","score_opus":0.03939386931853842,"score_gpt":0.32495102266678566,"score_spread":0.2855571533482472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890511793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980376,0.00020047929,0.00022106509,0.000016994509,0.000047967733,0.00019473517,0.00010236504,0.000017042237,0.0011617687],"genre_scores_gemma":[0.9987979,0.00009262446,0.00023301471,0.0006937212,0.000121796016,0.00001665681,0.000008941716,0.000012226538,0.000023124867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992206,0.00007180727,0.00020074652,0.00024168857,0.00009252112,0.00017262486],"domain_scores_gemma":[0.9993361,0.00003824073,0.00016708208,0.00031337733,0.0001005851,0.000044577962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012170007,0.00013528283,0.00019695339,0.000039212053,0.00005783804,0.0000075793587,0.0001591486,0.0001326246,0.000015804564],"category_scores_gemma":[0.0001491628,0.000107996166,0.00008548216,0.00012687405,0.00034094462,0.000007081579,0.00009146736,0.000059511298,0.000012933734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018492836,0.00021640127,0.011606699,0.000022136292,0.000040667983,4.8105426e-7,0.000020451687,0.000002819883,0.98185694,0.00008868677,0.0002578993,0.005701901],"study_design_scores_gemma":[0.0004246329,0.0004352858,0.057094213,0.000023028626,0.0000134934135,7.098379e-7,0.0000106316065,0.000017271379,0.9201561,0.00002074808,0.021686083,0.00011777151],"about_ca_topic_score_codex":0.000092932256,"about_ca_topic_score_gemma":0.000030629133,"teacher_disagreement_score":0.061700795,"about_ca_system_score_codex":0.0000051736743,"about_ca_system_score_gemma":0.000037636368,"threshold_uncertainty_score":0.4403956},"labels":[],"label_agreement":null},{"id":"W2890576383","doi":"10.3390/v10090493","title":"Identification of Novel Subcellular Localization and Trafficking of HIV-1 Nef Variants from Reference Strains G (F1.93.HH8793) and H (BE.93.VI997)","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; University of Pittsburgh","keywords":"Biology; Colocalization; Golgi apparatus; Subcellular localization; Immunofluorescence; Cell biology; Flow cytometry; Virology; Molecular biology; Genetics; Antibody; Cytoplasm; Endoplasmic reticulum","score_opus":0.05674182206502976,"score_gpt":0.295726731895486,"score_spread":0.23898490983045623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890576383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907658,0.0012944904,0.00669413,0.000036606092,0.00006967117,0.00015184966,0.00081445544,0.000017161456,0.00015582934],"genre_scores_gemma":[0.99910873,0.0002735914,0.00015093262,0.00002531188,0.000015164038,0.0000053484805,0.0002997493,0.000008059632,0.00011312615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992371,0.0000785529,0.0002612691,0.0002251124,0.000046263827,0.00015167809],"domain_scores_gemma":[0.99948186,0.000081273756,0.00013302507,0.00018480096,0.00009538457,0.000023651615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014038004,0.00009697442,0.00017653471,0.00008523798,0.000096621145,0.000013366753,0.00008085371,0.000119081764,0.00016131838],"category_scores_gemma":[0.00008046687,0.00008457495,0.000016683802,0.00009050533,0.0004074571,0.00010997117,0.0000438224,0.00006565672,0.000048434165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009863919,0.00021025704,0.009678698,0.000024817431,0.00012604885,0.0000011903385,0.0007933224,0.0000028615605,0.98504305,0.0011503284,0.00018767957,0.0026830905],"study_design_scores_gemma":[0.0024044705,0.00040655505,0.11669531,0.00008873207,0.00009168798,0.000008828351,0.00041273265,0.00021729288,0.8759864,0.00017779588,0.00335657,0.00015360478],"about_ca_topic_score_codex":0.0006041614,"about_ca_topic_score_gemma":0.00018658498,"teacher_disagreement_score":0.109056644,"about_ca_system_score_codex":0.0000112328,"about_ca_system_score_gemma":0.00003837318,"threshold_uncertainty_score":0.34488666},"labels":[],"label_agreement":null},{"id":"W2892042173","doi":"10.3390/v10100532","title":"Photodynamic Inactivation of Herpes Simplex Viruses","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Photodynamic Therapy Research Studies","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Acadia University; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Queen's University; Dalhousie University; University of Alberta","keywords":"Herpes simplex virus; Virology; Photosensitizer; Vesicular stomatitis virus; Biology; Virus; Foscarnet; Viral envelope; Microbiology; Cytotoxic T cell; In vitro; Herpesviridae; Chemistry; Biochemistry; Viral disease","score_opus":0.04885035874909098,"score_gpt":0.373919767322871,"score_spread":0.32506940857378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892042173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957879,0.00025713124,0.00008037673,0.00012578868,0.00009599273,0.00035998848,0.000038541963,0.000102742306,0.003151542],"genre_scores_gemma":[0.9979632,0.00020711061,0.0002549835,0.001120481,0.00018510749,0.000028702803,0.00000579607,0.000028849736,0.00020576385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988382,0.000049658756,0.00026717293,0.00022368213,0.00034935583,0.00027196002],"domain_scores_gemma":[0.9990682,0.00016558703,0.00011047881,0.00033818732,0.00024063943,0.00007690918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001738362,0.00015096615,0.0003249004,0.0002033312,0.000097024196,0.000010340089,0.00012175944,0.000064712054,0.00047832544],"category_scores_gemma":[0.00033968425,0.00012067782,0.0000730523,0.00034922184,0.00046315746,0.00015802664,0.0000767308,0.00009145013,0.000083591796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007376519,0.00021787219,0.0019209532,0.00006871979,0.00019205302,0.0000054900884,0.00040171036,5.1113295e-7,0.97736895,0.0002479197,0.0011178982,0.017720263],"study_design_scores_gemma":[0.0010459295,0.0007755973,0.03693394,0.00010987787,0.000036327096,0.000007440356,0.00028588643,0.00014523552,0.90383464,0.00043746002,0.056259498,0.00012819475],"about_ca_topic_score_codex":0.00065968104,"about_ca_topic_score_gemma":0.00018375948,"teacher_disagreement_score":0.07353435,"about_ca_system_score_codex":0.000095032876,"about_ca_system_score_gemma":0.0001048301,"threshold_uncertainty_score":0.5237328},"labels":[],"label_agreement":null},{"id":"W2892100861","doi":"10.3390/v10090487","title":"Viruses of Eukaryotic Algae: Diversity, Methods for Detection, and Future Directions","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Gordon and Betty Moore Foundation; National Science Foundation","keywords":"Algae; Diversity (politics); Computational biology; Biology; Virology; Evolutionary biology; Botany; Political science","score_opus":0.06779469979010164,"score_gpt":0.3798846412009303,"score_spread":0.3120899414108287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892100861","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017741857,0.99564946,0.0014289663,0.000010266225,0.001405823,0.0006182695,0.00023399435,0.000053302363,0.00042247778],"genre_scores_gemma":[0.000009874165,0.9925551,0.006622217,0.0000971282,0.00035150506,0.000051100542,0.0000066416387,0.00003115359,0.00027527448],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99894774,0.00013710423,0.00031537493,0.00035937282,0.000062230996,0.00017819602],"domain_scores_gemma":[0.9991486,0.00024262066,0.00027318977,0.00024503598,0.000019466373,0.00007109796],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018160713,0.0002468131,0.00060318474,0.00009536619,0.00043993752,0.00003523204,0.00021149413,0.00019637897,0.0009646447],"category_scores_gemma":[0.000047772377,0.00020477493,0.000274162,0.00026083144,0.00023771111,0.0002273317,0.0005760647,0.00014058086,0.00009664514],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000060670054,0.00004323519,0.00001588242,0.0007801717,0.000098288496,2.7927052e-7,0.000081106184,5.3701406e-8,0.001273803,0.0000080168375,0.0012400377,0.99645305],"study_design_scores_gemma":[0.000062129584,0.00007891291,0.0002836604,0.00035314445,0.0006253613,0.000029346887,0.000017169725,0.0000014541266,0.0006575076,0.000033192056,0.99766105,0.00019709257],"about_ca_topic_score_codex":0.00068837404,"about_ca_topic_score_gemma":0.00032877462,"teacher_disagreement_score":0.996421,"about_ca_system_score_codex":0.00009490393,"about_ca_system_score_gemma":0.000014749211,"threshold_uncertainty_score":0.9999486},"labels":[],"label_agreement":null},{"id":"W2892636970","doi":"10.3390/v10100528","title":"Considerations for Optimization of High-Throughput Sequencing Bioinformatics Pipelines for Virus Detection","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Computer science; Pipeline (software); Identification (biology); Pipeline transport; Data mining; Throughput; Reliability (semiconductor); Computational biology; Biology; Engineering","score_opus":0.044322540687841375,"score_gpt":0.28550088620641695,"score_spread":0.2411783455185756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892636970","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19854748,0.000005686131,0.7998519,0.000075067815,0.00049299054,0.00048081685,0.00022325438,0.000043188535,0.0002796282],"genre_scores_gemma":[0.79666924,0.000011443733,0.2025991,0.0004446732,0.00013536049,0.00005026928,0.000012139558,0.000011815892,0.000065947446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946594,0.000008707194,0.00025494382,0.000108802444,0.000045099518,0.000116519805],"domain_scores_gemma":[0.99953765,0.0001287993,0.0001386045,0.00011305088,0.00005781469,0.000024069013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007634152,0.000075944605,0.00009594058,0.00003327688,0.00023631383,0.000032743297,0.000044433666,0.000047245732,0.00056638196],"category_scores_gemma":[0.00016421212,0.000071172384,0.000045177454,0.00007895079,0.00011607808,0.00046010432,0.00002790228,0.000023754452,0.000038842376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030802425,0.000025055824,0.000011437881,0.00001591559,0.000011344534,3.981027e-8,0.00030357795,0.015127388,0.9802631,0.00017184058,0.0018349353,0.0022045535],"study_design_scores_gemma":[0.00028962005,0.00020496274,0.00015316856,0.000013876872,0.00003328892,0.0000058852215,0.00010371298,0.05074465,0.9416446,0.0007039702,0.005997348,0.00010491497],"about_ca_topic_score_codex":0.0007998811,"about_ca_topic_score_gemma":0.0012912448,"teacher_disagreement_score":0.59812176,"about_ca_system_score_codex":0.0000761436,"about_ca_system_score_gemma":0.000014715698,"threshold_uncertainty_score":0.62014854},"labels":[],"label_agreement":null},{"id":"W2895926369","doi":"10.3390/v10100568","title":"Rapid Construction of a Replication-Competent Infectious Clone of Human Adenovirus Type 14 by Gibson Assembly","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Eye Institute; National Natural Science Foundation of China","keywords":"Biology; Virology; Plasmid; Rolling circle replication; clone (Java method); PBR322; Virus; Restriction enzyme; Genome; Viral replication; Origin of replication; Gene; Genetics; DNA replication","score_opus":0.029384428813202787,"score_gpt":0.32963804359461096,"score_spread":0.30025361478140816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895926369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973334,0.0013045612,0.000086555934,0.00002932895,0.00010837437,0.00018548779,0.000042825104,0.000016917176,0.0008925457],"genre_scores_gemma":[0.99886316,0.0004526635,0.00016620875,0.00014235679,0.00017128115,0.000014150093,0.000061528684,0.000023561452,0.00010507661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893695,0.00009912336,0.00028735204,0.0003195875,0.00018674595,0.00017021192],"domain_scores_gemma":[0.9987031,0.000015119734,0.00019440304,0.0006713071,0.00036337407,0.000052670643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025575125,0.00011760268,0.00017449162,0.00008206137,0.000076193835,0.000009154692,0.00018810351,0.00012507783,0.00013973925],"category_scores_gemma":[0.00010672502,0.00011713531,0.000059509366,0.00020415695,0.00034205333,0.000005723783,0.000065653556,0.0000686699,0.000025333988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006130458,0.00011766213,0.0034694297,0.000019238667,0.000085592605,1.9034788e-7,0.000026052638,0.000001243744,0.9863857,0.000089608846,0.0028284756,0.0063637313],"study_design_scores_gemma":[0.00050555257,0.004802838,0.0007520235,0.0000115900775,0.0000143322395,0.000005737615,0.000019964818,0.0000038760836,0.9803892,0.000050837294,0.013334028,0.00011001646],"about_ca_topic_score_codex":0.00014095756,"about_ca_topic_score_gemma":0.000099674115,"teacher_disagreement_score":0.010505552,"about_ca_system_score_codex":0.00001622853,"about_ca_system_score_gemma":0.00008990524,"threshold_uncertainty_score":0.4776639},"labels":[],"label_agreement":null},{"id":"W2896071425","doi":"10.3390/v11020095","title":"Metagenomic Characterization of the Viral Community of the South Scotia Ridge","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Key Research and Development Program of China; Qingdao National Laboratory for Marine Science and Technology; National Natural Science Foundation of China","keywords":"Metagenomics; Ridge; Nova scotia; Biology; Computational biology; Virology; Evolutionary biology; Geology; Genetics; Paleontology; Oceanography; Gene","score_opus":0.014312474725536178,"score_gpt":0.21789201601719937,"score_spread":0.2035795412916632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896071425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99858826,0.000002725934,0.0000059029608,0.000040097664,0.0003122738,0.00014767644,0.00011820983,0.000004556695,0.0007802894],"genre_scores_gemma":[0.9991898,0.0000021796907,0.000012259964,0.00028994103,0.0000080533055,9.990677e-7,0.000003123208,0.000005425213,0.00048823532],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995691,0.000120346325,0.00012886265,0.000055381213,0.000060844526,0.000065461354],"domain_scores_gemma":[0.9994559,0.000017832308,0.0001526417,0.0003596529,0.0000043898076,0.000009533044],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008438938,0.00005231265,0.000078369354,0.0000075529942,0.000084943254,0.0000083189325,0.00031342616,0.000022608885,0.0012576387],"category_scores_gemma":[0.000009770416,0.000029571707,0.00006913583,0.00008592899,0.00012813744,0.00012935497,0.0002722466,0.000111548354,0.00020600442],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000053631206,0.00003416798,0.037640866,0.0000045357424,0.000006915528,7.736618e-9,0.00060415134,0.00001825996,0.9615152,0.00001963765,0.00002914034,0.00012177652],"study_design_scores_gemma":[0.000044002732,0.000009068454,0.5771734,0.000008930231,0.000009515295,4.2633977e-7,0.000042589305,0.0000054666743,0.42055213,0.0000046989844,0.0021277538,0.000022018503],"about_ca_topic_score_codex":0.0019968415,"about_ca_topic_score_gemma":0.00020019124,"teacher_disagreement_score":0.54096305,"about_ca_system_score_codex":0.000023389988,"about_ca_system_score_gemma":0.0000054763223,"threshold_uncertainty_score":0.99965537},"labels":[],"label_agreement":null},{"id":"W2896173991","doi":"10.3390/v10100566","title":"Current Perspectives on High-Throughput Sequencing (HTS) for Adventitious Virus Detection: Upstream Sample Processing and Library Preparation","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Throughput; Current (fluid); Upstream (networking); Sample (material); DNA sequencing; Computer science; Computational biology; Biology; Engineering; Telecommunications; Chromatography; Genetics; Chemistry; Gene; Electrical engineering","score_opus":0.04672373963354412,"score_gpt":0.2942350930044185,"score_spread":0.2475113533708744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896173991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996935,0.0012162323,0.00046652617,0.00010099699,0.00017749821,0.0003207821,0.00013342957,0.0002320328,0.00041749736],"genre_scores_gemma":[0.9978786,0.00036373312,0.00046290303,0.00012110473,0.0010458576,0.0000914416,0.000010364026,0.0000026265611,0.000023385084],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991704,0.000035642755,0.00014900908,0.00035825517,0.00009987453,0.00018678451],"domain_scores_gemma":[0.9995583,0.0001889115,0.000090580725,0.000042635307,0.00007893115,0.000040615436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000065243315,0.00014185974,0.00013157695,0.000022957252,0.00091422634,0.00013206623,0.00006995361,0.000049588984,0.00010940731],"category_scores_gemma":[0.00010647312,0.00006489854,0.00004625721,0.00021165087,0.00017241127,0.0005131318,0.000056060733,0.000065665656,0.000026079306],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090426725,0.0005384423,0.010724027,0.0000931956,0.000102090824,0.0000013132434,0.004457343,0.000017015114,0.44199547,0.009537193,0.002153232,0.5294764],"study_design_scores_gemma":[0.00069162954,0.00842023,0.068875745,0.0003068036,0.00013111971,0.000019814832,0.008065381,0.00050296483,0.7115834,0.02106962,0.17926747,0.0010658662],"about_ca_topic_score_codex":0.00041261714,"about_ca_topic_score_gemma":0.0011285619,"teacher_disagreement_score":0.52841055,"about_ca_system_score_codex":0.000053759366,"about_ca_system_score_gemma":0.000013162769,"threshold_uncertainty_score":0.7031582},"labels":[],"label_agreement":null},{"id":"W2896639970","doi":"10.3390/v10110603","title":"Comprehensive Analysis of Hepatitis B Virus Promoter Region Mutations","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary; University of Lethbridge","funders":"","keywords":"cccDNA; Hepatitis B virus; Biology; Virology; Genome; Viral replication; Genetics; Virus; Computational biology; Gene; HBsAg","score_opus":0.06817672064475573,"score_gpt":0.3379440087531016,"score_spread":0.2697672881083459,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896639970","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99671924,0.00027994197,0.00060123886,0.00022339163,0.000112017064,0.00025842167,0.00006673005,0.000115813185,0.0016232289],"genre_scores_gemma":[0.99684894,0.0004429529,0.0010284605,0.0013283734,0.00012915111,0.000025228594,0.000018640698,0.000024240404,0.00015403237],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989714,0.000052740565,0.0003268014,0.00022795903,0.00023883814,0.00018224037],"domain_scores_gemma":[0.9988396,0.000106752246,0.00013270446,0.00034352913,0.00050512137,0.0000722822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004419369,0.00013250117,0.00047981335,0.00044283338,0.00010819818,0.000009010293,0.00006420604,0.000059962356,0.000326715],"category_scores_gemma":[0.0001546824,0.00011498214,0.00015363286,0.0010188273,0.00038832807,0.00009467812,0.000051096347,0.00006979192,0.00020554826],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008493597,0.00019448715,0.95417607,0.000056642475,0.0025951422,0.000048561637,0.0019868184,0.0000046397636,0.03369089,0.00027247643,0.0037370701,0.0031522792],"study_design_scores_gemma":[0.00037809386,0.00047331257,0.92006433,0.00006721613,0.0020633966,0.000009213691,0.000051848572,0.00039424308,0.05395357,0.00008939027,0.022321407,0.00013400525],"about_ca_topic_score_codex":0.011873245,"about_ca_topic_score_gemma":0.010143927,"teacher_disagreement_score":0.034111753,"about_ca_system_score_codex":0.0000438441,"about_ca_system_score_gemma":0.000047395264,"threshold_uncertainty_score":0.99470675},"labels":[],"label_agreement":null},{"id":"W2896899835","doi":"10.3390/v10100553","title":"Roles of orf60a and orf61 in Development of Bacteriophages λ and Φ24B","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Prophage; ORFS; Biology; Bacteriophage; Escherichia coli; Genome; Lysogenic cycle; Open reading frame; Genetics; Lambda phage; Gene; Lytic cycle; Virus; Peptide sequence","score_opus":0.014604121530496358,"score_gpt":0.25632691145255226,"score_spread":0.2417227899220559,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896899835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989526,0.000072837036,0.00001185504,0.000017073668,0.000032610795,0.00004710349,0.0000068125687,0.0000041509834,0.0008549288],"genre_scores_gemma":[0.99779093,0.000056387817,0.0019949223,0.000059314367,0.0000087657845,0.0000020459495,5.613276e-7,0.000004127967,0.0000829229],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99960536,0.000011574133,0.00015832878,0.00010745889,0.000039094037,0.00007816767],"domain_scores_gemma":[0.9998358,0.000017255186,0.00005398095,0.00006402312,0.0000046891923,0.000024275476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058973732,0.000056284196,0.00009667985,0.000031119926,0.000031347925,0.000007708196,0.000046183955,0.000024560568,0.0006992149],"category_scores_gemma":[0.00000969,0.000048480284,0.0000074812683,0.00006335382,0.00021980381,0.00013913527,0.00011473193,0.000026639867,0.000020239133],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014322969,0.000031721152,0.025169602,0.000008498993,0.0000039211623,4.260026e-7,0.0011945976,2.0535059e-7,0.9545752,0.0000074918366,0.000044337703,0.018949704],"study_design_scores_gemma":[0.000090579815,0.000032385225,0.54965466,0.000023907482,0.000002284471,0.0000024916362,0.000092282935,0.000002184174,0.4405692,0.000008566787,0.009482575,0.000038911418],"about_ca_topic_score_codex":0.0003160072,"about_ca_topic_score_gemma":0.0019585344,"teacher_disagreement_score":0.52448505,"about_ca_system_score_codex":0.0000128101365,"about_ca_system_score_gemma":0.000005884934,"threshold_uncertainty_score":0.7655913},"labels":[],"label_agreement":null},{"id":"W2898677375","doi":"10.3390/v10110602","title":"CRISPRStudio: A User-Friendly Software for Rapid CRISPR Array Visualization","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"CRISPR; Computer science; Trans-activating crRNA; Computational biology; Biology; Genetics; Genome editing; Gene","score_opus":0.016774567387429443,"score_gpt":0.3459441328392829,"score_spread":0.32916956545185344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898677375","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10545643,0.0011063841,0.8923319,0.00003412504,0.00047725305,0.00026626757,0.000059060694,0.00006017333,0.00020843995],"genre_scores_gemma":[0.977309,0.00022246479,0.019259406,0.0010270688,0.0015010108,0.00010819941,0.00012259146,0.00006908554,0.00038118236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919134,0.000016948263,0.00016373712,0.00030035223,0.00008743961,0.00024020682],"domain_scores_gemma":[0.9994171,0.00001724862,0.00004223035,0.00027829848,0.00018269493,0.00006238324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009928814,0.00014813058,0.00011756452,0.00004275268,0.00012423907,0.000029505869,0.00013623374,0.00010352513,0.000045769604],"category_scores_gemma":[0.00026965604,0.00014473608,0.000065232896,0.00010514184,0.00006011217,0.0000051589286,0.000045084533,0.00002900446,0.000024950463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084755164,0.000044780627,0.0014225978,0.000038310303,0.000057364414,3.8253484e-7,0.00006805764,0.000036907968,0.92958444,0.00014442227,0.06641459,0.002103379],"study_design_scores_gemma":[0.0002563645,0.00037671922,0.0005191167,0.00000762462,0.000015751153,0.000002195295,0.000040215218,0.000017929482,0.576009,0.000012214927,0.42261335,0.00012955896],"about_ca_topic_score_codex":0.000010564493,"about_ca_topic_score_gemma":0.000034988723,"teacher_disagreement_score":0.87307245,"about_ca_system_score_codex":0.000007527283,"about_ca_system_score_gemma":0.000035934394,"threshold_uncertainty_score":0.5902166},"labels":[],"label_agreement":null},{"id":"W2899152719","doi":"10.3390/v10120709","title":"RVFV Infection in Goats by Different Routes of Inoculation","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Manitoba; Canadian Food Inspection Agency","funders":"Defence Research and Development Canada","keywords":"Viremia; Outbreak; Virology; Biology; Breed; Titer; Viral shedding; Arbovirus; Veterinary medicine; Inoculation; Virus; Medicine; Immunology","score_opus":0.03478256355335859,"score_gpt":0.3255192963134227,"score_spread":0.2907367327600641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899152719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983537,0.000058469526,0.00024953438,0.000037362937,0.00013358904,0.00010341866,0.0000038369944,0.000031009626,0.001029085],"genre_scores_gemma":[0.99958843,0.000049606962,0.000022471857,0.00012076144,0.00010393264,0.0000064118467,0.000008129693,0.0000068257464,0.00009340659],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996068,0.000018761622,0.00014502917,0.000085119165,0.000069929905,0.00007439763],"domain_scores_gemma":[0.99978447,0.000016635078,0.000043261054,0.00009112034,0.000039601047,0.00002489941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000042390217,0.00005856134,0.00011658171,0.000116876996,0.000024118775,0.000005019359,0.000012233489,0.00004750411,0.00017143137],"category_scores_gemma":[0.000045391575,0.00004524855,0.000029260325,0.00017095821,0.00004369482,0.0000817614,0.000010645473,0.00005069649,0.000028869277],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031057763,0.00015408003,0.8723663,0.000015514126,0.000011038301,2.5700723e-7,0.00006934743,0.0000025242816,0.12403788,0.00011310759,0.0008898359,0.0023090332],"study_design_scores_gemma":[0.0003902116,0.00039343614,0.83244824,0.000052282736,0.0000162044,0.000001958093,0.000006799641,0.00018821849,0.16287945,0.00007107197,0.003506869,0.000045244713],"about_ca_topic_score_codex":0.0018230266,"about_ca_topic_score_gemma":0.0005034184,"teacher_disagreement_score":0.03991808,"about_ca_system_score_codex":0.000038186274,"about_ca_system_score_gemma":0.000008989112,"threshold_uncertainty_score":0.2755883},"labels":[],"label_agreement":null},{"id":"W2899231457","doi":"10.3390/v10110595","title":"Comparative Genomics and Characterization of the Late Promoter pR’ from Shiga Toxin Prophages in Escherichia coli","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Livestock and Meat Agency","keywords":"Prophage; Shiga toxin; Escherichia coli; Biology; Gene; Genetics; Promoter; Transcription (linguistics); Reporter gene; Bacteriophage; Molecular biology; Gene expression","score_opus":0.02921024441506726,"score_gpt":0.2911004197851538,"score_spread":0.2618901753700865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899231457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99907905,0.00021197001,0.000019798314,0.000095623545,0.000046251218,0.00032411347,0.000053641143,0.0000039144966,0.00016566689],"genre_scores_gemma":[0.9990668,0.00019696407,0.00019684617,0.00023376688,0.00009289474,0.000028467352,0.000011903949,0.000008632441,0.00016369332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99943167,0.00009143757,0.00012814812,0.00015663214,0.00007331047,0.00011881301],"domain_scores_gemma":[0.99966633,0.000011015051,0.00007202749,0.00016500891,0.00006410012,0.000021522817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007664481,0.00008792981,0.00012772724,0.000016445116,0.00005269501,0.000016234873,0.000119754135,0.00005524587,0.000008250639],"category_scores_gemma":[0.000042656873,0.000062037456,0.000017387465,0.00008983832,0.00027940935,0.0000063381494,0.00021395188,0.000058502104,0.0000025834097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079874764,0.000041315867,0.017437741,0.000009492478,0.00003457515,2.2209629e-7,0.0006659761,5.496754e-7,0.981554,0.0000086110795,0.000035770758,0.00013189715],"study_design_scores_gemma":[0.00017142571,0.00011173969,0.30357373,0.000013182808,0.000004276663,9.3666785e-8,0.000041945183,0.00005333088,0.69336754,0.000022410506,0.002587216,0.00005310823],"about_ca_topic_score_codex":0.0000817368,"about_ca_topic_score_gemma":0.00025778977,"teacher_disagreement_score":0.2881864,"about_ca_system_score_codex":0.000009180233,"about_ca_system_score_gemma":0.000055507015,"threshold_uncertainty_score":0.2529814},"labels":[],"label_agreement":null},{"id":"W2899593301","doi":"10.3390/v10110610","title":"Combination Therapy with Oseltamivir and Favipiravir Delays Mortality but Does Not Prevent Oseltamivir Resistance in Immunodeficient Mice Infected with Pandemic A(H1N1) Influenza Virus","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Favipiravir; Oseltamivir; Virology; Medicine; Neuraminidase inhibitor; Neuraminidase; Virus; Antiviral drug; Combination therapy; Influenza A virus; Regimen; Viral shedding; Pandemic; Pharmacology; Internal medicine; Coronavirus disease 2019 (COVID-19)","score_opus":0.07468606115009198,"score_gpt":0.3639109814492428,"score_spread":0.2892249202991508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899593301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99403006,0.003008455,0.000052159805,0.00009241585,0.00006233083,0.0016332208,0.00011987309,0.00020629252,0.0007951947],"genre_scores_gemma":[0.9946865,0.0017776471,0.00032015963,0.0025226567,0.00007700197,0.00027616986,0.000011941893,0.00007175547,0.00025616528],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99658257,0.0002943003,0.0006399559,0.00077675923,0.0009643688,0.0007420733],"domain_scores_gemma":[0.99803495,0.00027383328,0.0002839177,0.0006987625,0.0005480061,0.00016053334],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008368966,0.00050987676,0.00069511746,0.0003910794,0.000358752,0.00009872277,0.00022484513,0.00017625508,0.000036911173],"category_scores_gemma":[0.00027418014,0.00031556888,0.000056015284,0.00076597615,0.0011350142,0.00047016673,0.00015218921,0.0005452828,0.0000437111],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0072632316,0.0010974032,0.58589303,0.0002121211,0.00044260419,0.000058401216,0.002536375,0.000008892534,0.4003263,0.00035402202,0.000041496838,0.0017661084],"study_design_scores_gemma":[0.0072508804,0.0017852125,0.77027476,0.0006169488,0.0000968259,0.000016408449,0.00030343304,0.00004028921,0.21264872,0.00010938392,0.0063649598,0.00049216044],"about_ca_topic_score_codex":0.0029711714,"about_ca_topic_score_gemma":0.00938576,"teacher_disagreement_score":0.18767758,"about_ca_system_score_codex":0.00030893195,"about_ca_system_score_gemma":0.00027059944,"threshold_uncertainty_score":0.99992967},"labels":[],"label_agreement":null},{"id":"W2900380467","doi":"10.3390/v10110616","title":"Characterization of the Escherichia coli Virulent Myophage ST32","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"China Scholarship Council; National Natural Science Foundation of China; Canada Research Chairs","keywords":"ORFS; Myoviridae; Biology; Siphoviridae; Phylogenetic tree; Virulence; Escherichia coli; Bacteriophage; Genetics; Capsid; Genome; Open reading frame; Microbiology; Gene; Peptide sequence","score_opus":0.01484435089529902,"score_gpt":0.2414551787573214,"score_spread":0.22661082786202238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900380467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963929,0.0000033308365,0.000113018046,0.00010038516,0.0004711534,0.00011399606,0.00003315192,0.000017174398,0.0027548994],"genre_scores_gemma":[0.99764925,0.000010981976,0.000101651436,0.0011445318,0.000083872306,0.000005480965,0.0000022824722,0.000008427804,0.0009934979],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954194,0.00003082077,0.00012877963,0.00011498128,0.00007994198,0.0001035413],"domain_scores_gemma":[0.9996658,0.000008634298,0.00009348089,0.00019826878,0.000008622028,0.000025177],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004401068,0.00006591081,0.00006448642,0.000009597192,0.00011534876,0.000017955135,0.00016535625,0.000029798151,0.0058764685],"category_scores_gemma":[0.000011528675,0.000045955203,0.000038755006,0.00014844522,0.00020039771,0.00019805557,0.0001379941,0.000049772698,0.0007714463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008870574,0.000045994635,0.0018179071,0.0000016033176,0.000004588695,1.4962596e-7,0.0001686291,8.6986915e-7,0.99642587,0.000026730746,0.00049438584,0.0010044108],"study_design_scores_gemma":[0.000045235036,0.00002645641,0.32295078,0.000006865426,0.000005822228,6.470632e-7,0.000008767903,0.000012684487,0.60583127,0.000006873119,0.07106641,0.00003820755],"about_ca_topic_score_codex":0.0003427062,"about_ca_topic_score_gemma":0.00013905377,"teacher_disagreement_score":0.39059463,"about_ca_system_score_codex":0.00003393798,"about_ca_system_score_gemma":0.0000057838506,"threshold_uncertainty_score":0.9950323},"labels":[],"label_agreement":null},{"id":"W2900638597","doi":"10.3390/v10110641","title":"Insight into Influenza: A Virus Cap-Snatching","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Transcription (linguistics); Ribonucleoprotein; Nucleoprotein; Biology; RNA polymerase II; Messenger RNA; Polymerase; Influenza A virus; RNA polymerase; RNA-dependent RNA polymerase; Virology; RNA; Virus; Molecular biology; Cell biology; DNA; Gene; Genetics; Promoter; Gene expression","score_opus":0.2720555262713689,"score_gpt":0.4864715525634795,"score_spread":0.2144160262921106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900638597","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006393374,0.98888826,0.000008055932,0.000024202025,0.00046681685,0.0016827837,0.00011080007,0.0003216314,0.008433537],"genre_scores_gemma":[0.0000023959362,0.9929552,0.000614194,0.003407858,0.0017093446,0.0004352031,0.00003719824,0.00023005108,0.00060852437],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99535,0.0003395215,0.0012793966,0.0010014225,0.0010775672,0.0009520992],"domain_scores_gemma":[0.9968549,0.0006005608,0.00045927113,0.001318796,0.00035027662,0.000416213],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006351657,0.0010185586,0.0034419766,0.0010320822,0.00045178106,0.0001295914,0.0006017484,0.0006793913,0.00049522764],"category_scores_gemma":[0.0019769948,0.00072282035,0.0008575849,0.000994037,0.0006099499,0.00030291115,0.0008624303,0.0014232388,0.006177152],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015430634,0.00026548843,0.00010069738,0.048219007,0.0025053956,0.00041717198,0.0017036664,1.9076307e-7,0.000065682965,0.00026198837,0.027402034,0.91890436],"study_design_scores_gemma":[0.0005550967,0.00028109906,0.000013651192,0.019833386,0.0012549672,0.00007283279,0.000024880763,8.125375e-7,0.000094204894,0.000058206613,0.9771777,0.0006331899],"about_ca_topic_score_codex":0.00096867554,"about_ca_topic_score_gemma":0.00015829502,"teacher_disagreement_score":0.94977564,"about_ca_system_score_codex":0.00062705093,"about_ca_system_score_gemma":0.0010982049,"threshold_uncertainty_score":0.99952227},"labels":[],"label_agreement":null},{"id":"W2901001249","doi":"10.3390/v10110646","title":"Human Fetal Astrocytes Infected with Zika Virus Exhibit Delayed Apoptosis and Resistance to Interferon: Implications for Persistence","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women and Children’s Health Research Institute; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Zika virus; Microcephaly; Biology; Virus; Immunology; Virology; Interferon; Viral replication; Immune system; Chronic infection; Genetics","score_opus":0.03168551852181651,"score_gpt":0.3027802291806395,"score_spread":0.271094710658823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901001249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942673,0.00041606184,0.0028127567,0.00089489867,0.000031330306,0.00071924145,0.00016350314,0.000089828296,0.00060510193],"genre_scores_gemma":[0.9948558,0.000010505867,0.0021861529,0.0020359512,0.00027644937,0.00028495936,0.00001846878,0.0000265435,0.00030517182],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99909925,0.0000152195635,0.00018118227,0.00035528457,0.000098082404,0.0002509636],"domain_scores_gemma":[0.9990905,0.000048547827,0.00006515424,0.0003404894,0.00023793566,0.0002173748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000049440438,0.00015937517,0.00023654028,0.000078386656,0.00024404904,0.000052801566,0.00009445642,0.000043174052,0.000056717123],"category_scores_gemma":[0.00006606686,0.00012771667,0.000061196304,0.0001631545,0.00013808884,0.00009914952,0.000040212606,0.000054503813,0.00001595185],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0074408017,0.000444929,0.0354321,0.00018055498,0.00049935654,0.0000026659607,0.00064431544,0.000001305232,0.93328995,0.0039365985,0.011861949,0.00626547],"study_design_scores_gemma":[0.010804314,0.017575797,0.5741115,0.0009490004,0.0021147444,0.000035616413,0.0011607652,0.00010059872,0.32208782,0.00039166058,0.069459975,0.0012081766],"about_ca_topic_score_codex":0.000066813416,"about_ca_topic_score_gemma":0.00067906064,"teacher_disagreement_score":0.6112021,"about_ca_system_score_codex":0.00004013442,"about_ca_system_score_gemma":0.000053653486,"threshold_uncertainty_score":0.5208135},"labels":[],"label_agreement":null},{"id":"W2901038487","doi":"10.3390/v10110635","title":"The In Ovo Delivery of CpG Oligonucleotides Protects against Infectious Bronchitis with the Recruitment of Immune Cells into the Respiratory Tract of Chickens","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Calgary","funders":"Alberta Agriculture and Forestry; Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency; Canadian Poultry Research Council","keywords":"In ovo; Biology; Immune system; Infectious bronchitis virus; Respiratory tract; Immunology; CpG site; Embryo; Respiratory system; Virology; Virus; Gene; Gene expression; Cell biology","score_opus":0.02127093028920012,"score_gpt":0.2522070859695799,"score_spread":0.23093615568037978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901038487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99397457,0.0044206018,0.000008881881,0.00012201874,0.00014536313,0.0007996874,0.000005678918,0.000012368063,0.0005108566],"genre_scores_gemma":[0.9990861,0.0005897152,0.000007635056,0.00013783642,0.000019655807,0.000097910284,0.0000017963511,0.000012145338,0.000047247035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854654,0.000625608,0.0004695511,0.00011869401,0.000057382593,0.00018224916],"domain_scores_gemma":[0.9984525,0.00051915215,0.00044437556,0.00044953468,0.0001291913,0.0000052580194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00082398596,0.00012891334,0.00023032224,0.00008972562,0.00023704734,0.0000078418525,0.0002900036,0.00010403945,0.000025935562],"category_scores_gemma":[0.00009987076,0.00006018457,0.00007410964,0.00021324873,0.0011075707,0.000087717206,0.000075001204,0.00020984642,0.000023900828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006994293,0.00009772682,0.00086436654,0.000024269057,0.00013290351,6.6373656e-7,0.0027899563,0.000019459449,0.9808785,0.00046513882,0.00013188427,0.01389571],"study_design_scores_gemma":[0.0006449421,0.0008566998,0.03750596,0.00012410013,0.000021381613,0.000003622369,0.0008138189,0.0000013965152,0.9384711,0.00005270488,0.021435019,0.000069302674],"about_ca_topic_score_codex":0.0010803244,"about_ca_topic_score_gemma":0.00067511376,"teacher_disagreement_score":0.04240744,"about_ca_system_score_codex":0.000026464217,"about_ca_system_score_gemma":0.0001472804,"threshold_uncertainty_score":0.40808904},"labels":[],"label_agreement":null},{"id":"W2901150554","doi":"10.3390/v10120662","title":"The Transcriptional Repressor BS69 is a Conserved Target of the E1A Proteins from Several Human Adenovirus Species","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Transactivation; Repressor; Biology; Gene; Molecular biology; Cell biology; Genetics; Transcription factor","score_opus":0.045725786619327725,"score_gpt":0.3072140093097929,"score_spread":0.2614882226904652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901150554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960853,0.0014658243,0.0000532439,0.00069035846,0.00013957368,0.00040055325,0.00047658128,0.00001241003,0.0006761667],"genre_scores_gemma":[0.9952388,0.000106255,0.00014329051,0.0015096111,0.00055845035,0.000057981164,0.000027136195,0.00002736829,0.00233112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985877,0.0002182352,0.00025391986,0.00032508245,0.00034007916,0.00027495043],"domain_scores_gemma":[0.998859,0.00003357423,0.00010628959,0.00078413595,0.00016564097,0.000051384886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024551747,0.0001566259,0.00013886242,0.000022286336,0.00044143436,0.00004870864,0.00065812573,0.00011059361,0.0006511381],"category_scores_gemma":[0.00007612863,0.00009702306,0.00015219871,0.00010539885,0.00087699015,0.000006432294,0.00013929534,0.00013078265,0.00003102534],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001218288,0.00006332003,0.0029943376,0.0000047680064,0.00013984062,6.066775e-7,0.00018649352,0.0000035303592,0.9898523,0.00012627777,0.0052945586,0.00011569319],"study_design_scores_gemma":[0.0005062955,0.00068321335,0.012589907,0.000012531642,0.000011118856,0.0000012494228,0.00005192674,0.000009267706,0.87071484,0.00059049303,0.11471585,0.00011328945],"about_ca_topic_score_codex":0.00029937984,"about_ca_topic_score_gemma":0.0010273084,"teacher_disagreement_score":0.11913743,"about_ca_system_score_codex":0.000013902266,"about_ca_system_score_gemma":0.00015201185,"threshold_uncertainty_score":0.7129505},"labels":[],"label_agreement":null},{"id":"W2901156832","doi":"10.3390/v10110656","title":"Viral Proteins U41 and U70 of Human Herpesvirus 6A Are Dispensable for Telomere Integration","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases; European Research Council","keywords":"Telomere; Biology; Recombinase; Genome; Integrase; Virology; Genetics; RAD51; Virus; Homologous recombination; Cell biology; DNA; Gene; Recombination","score_opus":0.07006126749642853,"score_gpt":0.37463374713665576,"score_spread":0.3045724796402272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901156832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947175,0.00044936346,0.0003144813,0.00037260583,0.000069816146,0.0013069335,0.00011656707,0.000060300546,0.0025924598],"genre_scores_gemma":[0.99607915,0.000063815314,0.0012412525,0.0004258464,0.00055524864,0.0001249993,0.000016610962,0.00004219892,0.0014509014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998708,0.000034943758,0.0003294809,0.0003181075,0.0002849085,0.00032455864],"domain_scores_gemma":[0.9990549,0.000056468325,0.00013250588,0.00032122657,0.00028930968,0.00014559951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026486025,0.00017811298,0.0004005311,0.00019497331,0.00022429728,0.000048398462,0.00010481792,0.00012739793,0.0004268661],"category_scores_gemma":[0.00018763414,0.00013977017,0.00008760794,0.0001969673,0.00037568194,0.00020013131,0.000071163144,0.00016665793,0.00006272511],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014481116,0.00043556187,0.01922797,0.0004563971,0.00012960915,0.000009953467,0.00068399665,2.2841124e-7,0.91670656,0.005558425,0.007464147,0.047879025],"study_design_scores_gemma":[0.0028171884,0.0029150732,0.027909294,0.0004544099,0.000101409954,0.000013955152,0.00047974655,0.00026306187,0.8075766,0.0018502447,0.1553196,0.00029941963],"about_ca_topic_score_codex":0.00088077976,"about_ca_topic_score_gemma":0.0011943623,"teacher_disagreement_score":0.14785545,"about_ca_system_score_codex":0.00005328386,"about_ca_system_score_gemma":0.000083078674,"threshold_uncertainty_score":0.5699662},"labels":[],"label_agreement":null},{"id":"W2901247228","doi":"10.3390/v10110637","title":"Base-By-Base Version 3: New Comparative Tools for Large Virus Genomes","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Sequence (biology); Genome; Computational biology; Base (topology); Computer science; Biology; Base pair; Oligonucleotide; Multiple sequence alignment; Sequence alignment; Java; Gene; Sequence analysis; Genetics; Consensus sequence; Base sequence; Peptide sequence; Programming language","score_opus":0.16815994085997318,"score_gpt":0.3383143105184616,"score_spread":0.17015436965848843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901247228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878907,0.0014454199,0.0000353796,0.0007995318,0.00013783468,0.00047618814,0.008228476,0.00010720734,0.0008792119],"genre_scores_gemma":[0.9922618,0.0007102245,0.00039812413,0.0028936565,0.0012393765,0.000067837005,0.0005288285,0.0000025034508,0.0018976312],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988201,0.000060556536,0.00014638397,0.00030132817,0.00022989923,0.00044168433],"domain_scores_gemma":[0.9988219,0.0008092474,0.00005715219,0.000057810623,0.00009953591,0.00015433409],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018743034,0.00015426554,0.00021452397,0.000014787666,0.0005254057,0.00012264936,0.0002674178,0.000058149384,0.0011180243],"category_scores_gemma":[0.00016412091,0.000058172092,0.00007594171,0.00020369384,0.00009920346,0.00031962962,0.00013365471,0.00006879012,0.00077408866],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014962889,0.000060861374,0.0002596453,0.0000026117964,0.000021776286,0.0000010712556,0.000083270315,1.3009172e-7,0.65634835,0.00009472013,0.33795863,0.00501931],"study_design_scores_gemma":[0.0002307026,0.00044721592,0.001510844,0.00000964744,0.0000069523185,4.2537604e-7,0.00023427118,0.000023452714,0.3383759,0.00011070135,0.6589209,0.00012900177],"about_ca_topic_score_codex":0.0005022101,"about_ca_topic_score_gemma":0.0017876033,"teacher_disagreement_score":0.32096225,"about_ca_system_score_codex":0.00003140747,"about_ca_system_score_gemma":0.00001896377,"threshold_uncertainty_score":0.9997951},"labels":[],"label_agreement":null},{"id":"W2902544617","doi":"10.3390/v10120669","title":"Methanolic Extract of Rhizoma Coptidis Inhibits the Early Viral Entry Steps of Hepatitis C Virus Infection","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Ministry of Science and Technology, Taiwan","keywords":"Hepatitis C virus; Viral entry; Virology; Hepatitis C; Medicine; Virus; Viral replication; Hepacivirus; Immunology","score_opus":0.04625237985381905,"score_gpt":0.34609053595723227,"score_spread":0.29983815610341324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902544617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99075496,0.0003289073,0.00015100098,0.0000922679,0.0002148558,0.0005399291,0.00010397676,0.000058080615,0.0077560176],"genre_scores_gemma":[0.99647516,0.0024102647,0.00024161402,0.00022090842,0.00032795375,0.000037200298,0.000006632481,0.000040694613,0.000239576],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99790424,0.00024956668,0.00053386064,0.00025809417,0.0007064112,0.0003478154],"domain_scores_gemma":[0.99846435,0.00027510582,0.00023065764,0.00055822305,0.00034325747,0.00012838219],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048433314,0.00018432454,0.0004097222,0.0002824699,0.000101433754,0.000020130572,0.00016864824,0.00015398889,0.00079342694],"category_scores_gemma":[0.0006214586,0.00013459165,0.00015010322,0.0005482314,0.0005832995,0.00025760834,0.000121178586,0.00028577473,0.00029668535],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002948383,0.00026231023,0.5572102,0.00010329829,0.00014808885,0.0000071209656,0.00066778867,6.7305797e-7,0.4018073,0.00026354817,0.0011771626,0.03805764],"study_design_scores_gemma":[0.0006076639,0.001233517,0.3327731,0.00014445881,0.00006022685,0.000007048608,0.000010789468,0.000047486763,0.65517545,0.000096904296,0.009749899,0.000093462004],"about_ca_topic_score_codex":0.036402736,"about_ca_topic_score_gemma":0.005854702,"teacher_disagreement_score":0.25336814,"about_ca_system_score_codex":0.00007399641,"about_ca_system_score_gemma":0.00019381699,"threshold_uncertainty_score":0.9700139},"labels":[],"label_agreement":null},{"id":"W2902786952","doi":"10.3390/v10120671","title":"Synthesis and Translation of Viral mRNA in Reovirus-Infected Cells: Progress and Remaining Questions","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Biology; Transcription (linguistics); Translation (biology); Virology; Computational biology; Messenger RNA; Genetics; Gene; Philosophy","score_opus":0.10948164049249058,"score_gpt":0.40634338140138404,"score_spread":0.29686174090889345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902786952","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010142835,0.98890686,0.000014234249,0.00006235603,0.000042709024,0.00061613333,0.000085091924,0.000028770797,0.00010101022],"genre_scores_gemma":[0.0048196954,0.99331194,0.0015616743,0.00003456016,0.00010666521,0.00010378708,0.00002162538,0.000029285005,0.000010781557],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99816644,0.00049500033,0.0006042752,0.00032204788,0.00012130758,0.00029090393],"domain_scores_gemma":[0.99919915,0.0002513457,0.00019159017,0.00018594514,0.00004485661,0.00012710887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056235347,0.0002164997,0.0013378683,0.0003867726,0.000036804166,0.000013008309,0.0000605773,0.00022654071,0.000025391464],"category_scores_gemma":[0.0006822942,0.00016973515,0.00010299806,0.00018487936,0.0004229689,0.000086767344,0.00004372847,0.0002801827,0.000006053392],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000121221834,0.00007211629,0.0033428348,0.011211995,0.00010348109,0.000038034992,0.000053956253,4.151262e-8,0.00017814517,0.000023942937,0.0001757397,0.9846785],"study_design_scores_gemma":[0.0010640135,0.0017535557,0.0032823773,0.07946813,0.00096286903,0.00029669062,0.000029338871,0.00007166433,0.0002283214,0.00007568626,0.9123818,0.00038550657],"about_ca_topic_score_codex":0.00015089501,"about_ca_topic_score_gemma":0.00008930762,"teacher_disagreement_score":0.984293,"about_ca_system_score_codex":0.00003516271,"about_ca_system_score_gemma":0.000100950114,"threshold_uncertainty_score":0.6921599},"labels":[],"label_agreement":null},{"id":"W2902818658","doi":"10.3390/v10120683","title":"Persistence and Sexual Transmission of Filoviruses","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Ebola virus; Transmission (telecommunications); Sexual transmission; Persistence (discontinuity); Outbreak; Virology; Asymptomatic; Biology; Ebolavirus; Medicine; Internal medicine; Microbicide","score_opus":0.23177323364186667,"score_gpt":0.4309378070646507,"score_spread":0.199164573422784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902818658","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032884075,0.99786943,0.000027807891,0.000010101728,0.00004914557,0.0003696646,0.000058312755,0.000028788298,0.0012579061],"genre_scores_gemma":[0.000054456854,0.99843234,0.00021156506,0.000052569067,0.00016083714,0.000018105142,0.000013897421,0.000029496743,0.0010267145],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99894476,0.000069865135,0.00032623095,0.00027497823,0.00021159525,0.0001725959],"domain_scores_gemma":[0.99934876,0.00011450666,0.00010004267,0.00022316127,0.00008114812,0.00013238935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014868945,0.00020099622,0.0009253404,0.00024292407,0.00006832042,0.000015747715,0.00007405535,0.00020331464,0.00042144916],"category_scores_gemma":[0.00005876501,0.00013076143,0.00017632899,0.00026118715,0.00026283076,0.00006247569,0.000048823775,0.00022145153,0.00008246235],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022345112,0.00007312792,0.000037038204,0.0187128,0.00011725764,0.0000096025715,0.000037136913,7.097582e-9,0.00016444818,0.000012194836,0.0018089036,0.97900516],"study_design_scores_gemma":[0.00015004638,0.0005896448,0.000025106569,0.007827748,0.0005501709,0.00011730017,0.000027244432,0.0000025793559,0.00019427057,0.0000025269183,0.9903951,0.00011821426],"about_ca_topic_score_codex":0.00012146862,"about_ca_topic_score_gemma":0.000004136048,"teacher_disagreement_score":0.98858625,"about_ca_system_score_codex":0.000026096852,"about_ca_system_score_gemma":0.00021996793,"threshold_uncertainty_score":0.53322965},"labels":[],"label_agreement":null},{"id":"W2903202412","doi":"10.3390/v10120672","title":"Communities of Phytoplankton Viruses across the Transition Zone of the St. Lawrence Estuary","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phytoplankton; Estuary; Biology; Brackish water; Ecology; Habitat; Salinity; Oceanography","score_opus":0.028307671870117578,"score_gpt":0.28105970252445794,"score_spread":0.2527520306543404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903202412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99816746,0.000032924057,0.00011385478,0.00013601115,0.00021228944,0.00010173104,0.00021540276,0.000012654106,0.0010076802],"genre_scores_gemma":[0.99875957,0.000041759202,0.00006775481,0.0009887364,0.000040862233,0.0000054358793,0.0000020311547,0.0000063061416,0.00008754377],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946594,0.00007689578,0.00016473641,0.00007049662,0.000102956896,0.00011900155],"domain_scores_gemma":[0.9994555,0.00008244557,0.00010802481,0.00032544785,0.000014760817,0.000013795745],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000108313754,0.00007546674,0.00009470736,0.0000072596144,0.0002734407,0.000016610762,0.00033814483,0.00003101752,0.0011670216],"category_scores_gemma":[0.0000072883313,0.000043568496,0.000057437042,0.00013069897,0.0011658099,0.00020703493,0.00014330156,0.00009431231,0.000056181914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035811972,0.000089055524,0.0038801464,0.000008197573,0.000013618168,1.689786e-7,0.0074009746,0.00003853627,0.9851129,0.000042900123,0.0013901396,0.0019875371],"study_design_scores_gemma":[0.00013709004,0.000116264375,0.16334851,0.00006911775,0.000020798196,0.000008731139,0.0027840186,0.000024977327,0.79219365,0.000061882776,0.0411505,0.00008447568],"about_ca_topic_score_codex":0.0075599784,"about_ca_topic_score_gemma":0.010264632,"teacher_disagreement_score":0.19291927,"about_ca_system_score_codex":0.000016763897,"about_ca_system_score_gemma":0.000006081806,"threshold_uncertainty_score":0.999746},"labels":[],"label_agreement":null},{"id":"W2903309220","doi":"10.3390/v10120677","title":"Implications of HIV-1 Nef for “Shock and Kill” Strategies to Eliminate Latent Viral Reservoirs","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AIDS Vancouver; Simon Fraser University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Immune system; Latent Virus; Human immunodeficiency virus (HIV); Virus latency; Virology; Shock (circulatory); Virus; Biology; Immunology; Computational biology; Medicine; Viral replication","score_opus":0.09745608194996845,"score_gpt":0.38668915650802804,"score_spread":0.2892330745580596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903309220","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00070095516,0.99345917,0.00005357363,0.000109780034,0.00010819245,0.001330851,0.0036505305,0.00003072092,0.00055624987],"genre_scores_gemma":[0.0003775953,0.9964986,0.00027927253,0.00003582345,0.000038908063,0.00067366316,0.00083578716,0.000030279592,0.0012300948],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987399,0.00012764802,0.00037800637,0.00035996072,0.000027830301,0.0003666591],"domain_scores_gemma":[0.99899024,0.0003009317,0.00014366752,0.000408218,0.00010614904,0.00005080306],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001379301,0.00025471515,0.00078039826,0.00019747416,0.00015182473,0.000028648592,0.0002723529,0.0002540406,0.00013206784],"category_scores_gemma":[0.00007579928,0.0001799007,0.00018516147,0.00011896896,0.00022624207,0.00007206632,0.00016245403,0.00013394892,0.0009221805],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031214842,0.0005195356,0.00021391583,0.0105091855,0.0028148994,0.000004715471,0.00042157873,5.86417e-7,0.0020949328,0.010772777,0.111296475,0.8610392],"study_design_scores_gemma":[0.00031645567,0.00061622413,0.00015340357,0.00097014976,0.00029294082,0.000014789733,0.000038699236,2.3676291e-8,0.00034008236,0.00032803795,0.9967694,0.00015973822],"about_ca_topic_score_codex":0.00008183919,"about_ca_topic_score_gemma":0.000058226375,"teacher_disagreement_score":0.88547295,"about_ca_system_score_codex":0.0000425334,"about_ca_system_score_gemma":0.00023662373,"threshold_uncertainty_score":0.9998557},"labels":[],"label_agreement":null},{"id":"W2904910134","doi":"10.3390/v10120731","title":"Global Interactomics Connect Nuclear Mitotic Apparatus Protein NUMA1 to Influenza Virus Maturation","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; Research Institute in Oncology and Hematology; University of Manitoba; Research Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Interactome; Influenza A virus; Biology; Cell biology; Nuclear transport; Viral replication; Mitosis; Karyopherin; Virus; Viral protein; Virology; Gene; Genetics; Cell nucleus","score_opus":0.08858819942126196,"score_gpt":0.4037368975493117,"score_spread":0.31514869812804974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904910134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890558,0.0004188859,0.00007006449,0.00038732114,0.00031142088,0.001407927,0.00009193597,0.0002661358,0.007990507],"genre_scores_gemma":[0.9795616,0.00003035042,0.0032133874,0.015955642,0.00093611225,0.000101853395,0.0000062167073,0.000056850105,0.00013794843],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99791163,0.0000915558,0.00042401868,0.00045304728,0.0005238876,0.00059586595],"domain_scores_gemma":[0.998595,0.000082542305,0.000100487625,0.00053794286,0.00038076076,0.00030325446],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002129417,0.00029256614,0.00041211257,0.00018155397,0.00026231506,0.00014209749,0.00023165993,0.00013814842,0.0004738621],"category_scores_gemma":[0.0013830853,0.00024768952,0.00009649806,0.0005841834,0.00026630377,0.00032546808,0.00026522498,0.00023385268,0.00554344],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018012457,0.00072921626,0.010659427,0.00038090913,0.0008245376,0.00018613203,0.0033850418,0.000026429036,0.85067856,0.006109492,0.08745952,0.021548264],"study_design_scores_gemma":[0.0029438408,0.0027487436,0.027397461,0.0005823295,0.00010927296,0.00006432344,0.00056682347,0.0003794047,0.1166783,0.00052420504,0.8473089,0.00069644203],"about_ca_topic_score_codex":0.0005028294,"about_ca_topic_score_gemma":0.00025214805,"teacher_disagreement_score":0.75984937,"about_ca_system_score_codex":0.00038946635,"about_ca_system_score_gemma":0.00012832668,"threshold_uncertainty_score":0.99999756},"labels":[],"label_agreement":null},{"id":"W2905159120","doi":"10.3390/v10120728","title":"Contemporary Zika Virus Isolates Induce More dsRNA and Produce More Negative-Strand Intermediate in Human Astrocytoma Cells","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"McGill University","keywords":"Zika virus; Biology; Virology; Microcephaly; Lineage (genetic); Virus; Arbovirus; Titer; Astrocytoma; Genetics; Glioma; Gene","score_opus":0.029178827314106294,"score_gpt":0.310990508008936,"score_spread":0.2818116806948297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905159120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963969,0.0014775165,0.000009910169,0.0004482272,0.00017353692,0.000708552,0.00009588716,0.000084282976,0.0006051731],"genre_scores_gemma":[0.9967463,0.00006027627,0.00005620344,0.0021850287,0.00061947823,0.000056221408,0.00001688152,0.000043615015,0.0002159688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984237,0.000060548697,0.00040833076,0.000537007,0.00020360954,0.0003668254],"domain_scores_gemma":[0.9990456,0.00006882113,0.000137095,0.00038671927,0.000108001375,0.00025377312],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014270951,0.00029445626,0.0004966711,0.00017937516,0.00011112431,0.000060860453,0.00014842537,0.00011592186,0.00015058786],"category_scores_gemma":[0.00009757254,0.00024559945,0.00007798319,0.00019411744,0.00042590438,0.00032767816,0.000088427296,0.0002607005,0.00003572224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034013018,0.0005783755,0.07473382,0.00022861328,0.00016372447,0.00026640366,0.0031471,9.841459e-7,0.90308595,0.00004660572,0.006023031,0.0083240885],"study_design_scores_gemma":[0.009653648,0.0020830098,0.38562596,0.00067089725,0.0001773214,0.000027482069,0.0018250039,0.00027352956,0.5924177,0.00014538971,0.0065401033,0.0005599459],"about_ca_topic_score_codex":0.00052388746,"about_ca_topic_score_gemma":0.00013602532,"teacher_disagreement_score":0.31089213,"about_ca_system_score_codex":0.0000365771,"about_ca_system_score_gemma":0.0001294443,"threshold_uncertainty_score":0.99999964},"labels":[],"label_agreement":null},{"id":"W2905898260","doi":"10.3390/v11010006","title":"In Vitro Properties and Virulence of Contemporary Recombinant Influenza B Viruses Harboring Mutations of Cross-Resistance to Neuraminidase Inhibitors","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Zanamivir; Neuraminidase; Virulence; Virology; Recombinant DNA; Biology; In vitro; Mutant; Oseltamivir; Phenotype; Virus; Microbiology; Titer; Neuraminidase inhibitor; Gene; Genetics; Medicine","score_opus":0.1793489615705709,"score_gpt":0.40619447867291925,"score_spread":0.22684551710234835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905898260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994747,0.0036622826,0.000004744612,0.00014844854,0.00014463406,0.0006843632,0.00006581834,0.000034339937,0.0005084106],"genre_scores_gemma":[0.9975916,0.00007436908,0.000516282,0.0015207754,0.00007375161,0.0000873169,6.842954e-7,0.000027771459,0.000107425105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808556,0.00008305216,0.0007483146,0.00034341766,0.0004145528,0.00032507846],"domain_scores_gemma":[0.9986283,0.00021426093,0.0001927382,0.00034741615,0.00048136857,0.00013591042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038066026,0.00020779697,0.00052695884,0.0004409457,0.00011622426,0.000030037716,0.00014295516,0.000071001625,0.000015645195],"category_scores_gemma":[0.0020230159,0.00016986518,0.00005229585,0.00055721635,0.0012032746,0.00053913525,0.00019241554,0.00017216764,0.000019517658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003002684,0.00019589403,0.12591273,0.00049870746,0.00005529674,0.000024846924,0.0025676172,0.000004390916,0.866878,0.00008481616,0.00035930722,0.00041573535],"study_design_scores_gemma":[0.0013589282,0.00046018107,0.069348834,0.00079736125,0.000016551132,0.0000020523034,0.00036702867,0.00001375535,0.92015815,0.000057745117,0.007266105,0.0001532826],"about_ca_topic_score_codex":0.00087019906,"about_ca_topic_score_gemma":0.000100284386,"teacher_disagreement_score":0.056563888,"about_ca_system_score_codex":0.000057782207,"about_ca_system_score_gemma":0.00019730914,"threshold_uncertainty_score":0.6926901},"labels":[],"label_agreement":null},{"id":"W2907596629","doi":"10.3390/v11010017","title":"Genomic-Scale Interaction Involving Complementary Sequences in the Hepatitis C Virus 5′UTR Domain IIa and the RNA-Dependent RNA Polymerase Coding Region Promotes Efficient Virus Replication","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"NS5B; Internal ribosome entry site; RNA; RNA-dependent RNA polymerase; Biology; RNA polymerase; Virology; Untranslated region; Viral replication; Molecular biology; Hepatitis C virus; Virus; Genetics; Gene; Ribosome; Hepacivirus","score_opus":0.06325354093822072,"score_gpt":0.3459655905849429,"score_spread":0.2827120496467222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907596629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929591,0.0009414861,0.00033900372,0.002898924,0.00021141917,0.0015421251,0.00004286164,0.00006014444,0.001004926],"genre_scores_gemma":[0.9944885,0.0018881882,0.0002780999,0.0026817992,0.0003637775,0.0002031974,0.000029325056,0.000031857657,0.00003528353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99709463,0.00072023633,0.00057903357,0.00056858355,0.000618667,0.00041885654],"domain_scores_gemma":[0.99821985,0.0005402018,0.00022996865,0.00078515866,0.00011787338,0.00010692185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018125183,0.00023008567,0.00032336384,0.0002567276,0.0005474381,0.00018063269,0.00032655106,0.00007783499,0.00014996578],"category_scores_gemma":[0.00031351743,0.00014585856,0.00007000035,0.00038782228,0.0006712443,0.00023404873,0.00020785043,0.000403835,0.00006438346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014230745,0.00037739376,0.1366666,0.00010488125,0.000117554606,0.00012229904,0.015541371,0.000010270174,0.81352085,0.001431814,0.0013382087,0.029345706],"study_design_scores_gemma":[0.009149273,0.0015716901,0.15630823,0.0011549821,0.00025220675,0.00042987455,0.0076444945,0.0156058185,0.79035896,0.0015693645,0.015098373,0.0008567584],"about_ca_topic_score_codex":0.045913897,"about_ca_topic_score_gemma":0.023895912,"teacher_disagreement_score":0.028488947,"about_ca_system_score_codex":0.00032366795,"about_ca_system_score_gemma":0.0001001383,"threshold_uncertainty_score":0.99391544},"labels":[],"label_agreement":null},{"id":"W2908226354","doi":"10.3390/v11010021","title":"Insight into the Contribution and Disruption of Host Processes during HDV Replication","year":2018,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Virology; Hepatitis D virus; Helper virus; RNA; Virus; Viral replication; Ribozyme; Hepatitis D; Host (biology); Hepatitis B virus; Genetics; Gene","score_opus":0.06244384951086471,"score_gpt":0.37260413551544425,"score_spread":0.31016028600457957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908226354","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00823931,0.99029446,0.000015275555,0.00006980045,0.000075660755,0.0010498838,0.000033823315,0.00004960982,0.0001721731],"genre_scores_gemma":[0.01095336,0.98829335,0.000037902606,0.00006168404,0.00029354985,0.00022470402,0.00005343555,0.000028366752,0.000053657368],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99873865,0.00008495708,0.0004948946,0.00034830646,0.00019748886,0.00013570295],"domain_scores_gemma":[0.99847794,0.00020091321,0.00042922416,0.0005058215,0.00034601497,0.00004011788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002370483,0.00021971107,0.0008489636,0.00011503619,0.0001796428,0.000019197143,0.00008701341,0.00014963992,0.000011295748],"category_scores_gemma":[0.0019415088,0.00012851949,0.00008190272,0.0003465143,0.00026236533,0.00010801678,0.00010415135,0.00014368814,0.00003620963],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014999691,0.0002677751,0.014809832,0.1481203,0.0010899422,0.000013356043,0.0046678795,2.2893822e-8,0.0010245047,0.0007292806,0.0008253923,0.8283017],"study_design_scores_gemma":[0.0001718826,0.00010616737,0.0032347662,0.012686172,0.0007876425,0.000026601701,0.000012381071,3.1209265e-7,0.0012428027,0.000017606711,0.9815892,0.00012447478],"about_ca_topic_score_codex":0.0003530721,"about_ca_topic_score_gemma":0.0005037947,"teacher_disagreement_score":0.9807638,"about_ca_system_score_codex":0.000097635384,"about_ca_system_score_gemma":0.00017291996,"threshold_uncertainty_score":0.5240873},"labels":[],"label_agreement":null},{"id":"W2908564260","doi":"10.3390/v11010079","title":"CSV2018: The 2nd Symposium of the Canadian Society for Virology","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Dalhousie University; University of Saskatchewan; Dalhousie Medical Research Foundation","keywords":"Virology; Library science; Medicine; Political science; Computer science","score_opus":0.03430209778212591,"score_gpt":0.3154210273921099,"score_spread":0.281118929609984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908564260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9710172,0.00020055148,0.000016818409,0.026105437,0.00026309467,0.00062043115,0.00007414849,0.00000772936,0.0016946043],"genre_scores_gemma":[0.98223025,0.00008227441,0.00013794338,0.016379764,0.00011850086,0.000030343524,0.0000048026795,0.000009590128,0.0010065119],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99925333,0.00006394516,0.00014023753,0.00011803746,0.00008826779,0.00033616964],"domain_scores_gemma":[0.99944055,0.00007657071,0.000043112792,0.00029488883,0.000048540212,0.0000963452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031205715,0.00006289353,0.00018014967,0.000020654603,0.000102345824,0.0000050714266,0.00017755722,0.00007445857,0.00016797973],"category_scores_gemma":[0.00015734084,0.00003119408,0.00019708918,0.00005703452,0.00023297804,0.000023790222,0.000045959052,0.0001442166,0.00003321003],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038043052,0.000055065884,0.5359886,0.00013963302,0.00027489944,0.0000021895673,0.00029969108,0.000027229122,0.23921116,0.0024771413,0.22017695,0.0009669981],"study_design_scores_gemma":[0.0015440722,0.0011710002,0.24039228,0.000053810807,0.000060814637,0.000046856232,0.000173837,0.00042224495,0.005974279,0.00046059437,0.74962324,0.000076969314],"about_ca_topic_score_codex":0.036983598,"about_ca_topic_score_gemma":0.07569392,"teacher_disagreement_score":0.5294463,"about_ca_system_score_codex":0.00004839898,"about_ca_system_score_gemma":0.00020464281,"threshold_uncertainty_score":0.9694292},"labels":[],"label_agreement":null},{"id":"W2908895954","doi":"10.3390/v11010041","title":"Bats and Coronaviruses","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":490,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; McMaster University","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada","keywords":"Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Coronavirus; Coronavirus Infections; Virology; Betacoronavirus; Biology; Pandemic; Computational biology; Evolutionary biology; Medicine; Outbreak; Infectious disease (medical specialty); Pathology","score_opus":0.16455418088466095,"score_gpt":0.38434547931973373,"score_spread":0.21979129843507278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908895954","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003149312,0.9965037,0.000004230373,0.0000151147115,0.0013409769,0.00047923872,0.00017290596,0.00009827505,0.0013540386],"genre_scores_gemma":[0.000024749468,0.99500614,0.000008929227,0.0008363865,0.00007069063,0.00008554472,0.0001089623,0.000041484796,0.0038170805],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99795,0.00062533317,0.00051372335,0.0005065136,0.000016895046,0.0003875266],"domain_scores_gemma":[0.9977108,0.0014898537,0.0003033067,0.00045462526,0.000018895847,0.000022480071],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026642845,0.00043327405,0.0021337173,0.00012673305,0.00012733992,0.000013224523,0.00030264413,0.0010504338,0.0009422083],"category_scores_gemma":[0.00022329405,0.0003097384,0.00027381608,0.00007312395,0.00033999677,0.00008022989,0.00015172186,0.0005976523,0.008650083],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018475734,0.000023912666,0.00008989639,0.0022153275,0.00063281145,0.0000048146567,0.000011842215,4.715594e-8,0.000031094616,0.0019523862,0.011782703,0.9832367],"study_design_scores_gemma":[0.0002833642,0.00007493359,0.000028300012,0.0017081803,0.00087223883,0.00014404094,0.0000065505233,4.0803073e-8,0.000009099745,0.000062492225,0.99649143,0.0003193283],"about_ca_topic_score_codex":0.000052432762,"about_ca_topic_score_gemma":0.0000070032447,"teacher_disagreement_score":0.9847087,"about_ca_system_score_codex":0.000022985914,"about_ca_system_score_gemma":0.0001239473,"threshold_uncertainty_score":0.9999711},"labels":[],"label_agreement":null},{"id":"W2910709230","doi":"10.3390/v11010085","title":"The Incorporation of Host Proteins into the External HIV-1 Envelope","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Infectivity; Host (biology); Biology; Viral envelope; Budding; Mechanism (biology); Human immunodeficiency virus (HIV); Host factors; Membrane protein; Cell biology; Virology; Virus; Genetics; Membrane","score_opus":0.06943587923576483,"score_gpt":0.3420702922089577,"score_spread":0.27263441297319285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910709230","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000081288694,0.9976183,0.000024841636,0.000060165297,0.00024775314,0.0013477874,0.00017216444,0.000013952354,0.0004337285],"genre_scores_gemma":[0.00029091086,0.99540555,0.000027116312,0.000022639882,0.000043326996,0.00032891217,0.0001699861,0.000018675302,0.0036928607],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99862707,0.00053607486,0.00035675667,0.000197349,0.000059279606,0.00022347845],"domain_scores_gemma":[0.99861956,0.00048564887,0.00031664583,0.0005134349,0.000052020536,0.000012704671],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031484498,0.00020788876,0.00051890896,0.00006132805,0.00028112036,0.000029835926,0.0005116192,0.00020104671,0.0001752641],"category_scores_gemma":[0.00012541217,0.000084858824,0.00019143903,0.00012303579,0.00032702764,0.000046173365,0.00016720385,0.0003433708,0.008103867],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034270066,0.000064368556,0.00007458666,0.0010496374,0.00047764755,0.0000032432463,0.00014169536,4.4633357e-8,0.0005389644,0.0007825208,0.0023182635,0.99451476],"study_design_scores_gemma":[0.00017179914,0.00012895458,0.00006422923,0.0012894918,0.00014229538,0.000013815493,0.000021046944,1.327689e-8,0.00067445205,0.00004199665,0.997366,0.00008586899],"about_ca_topic_score_codex":0.00025798232,"about_ca_topic_score_gemma":0.0001413499,"teacher_disagreement_score":0.99504775,"about_ca_system_score_codex":0.000054027536,"about_ca_system_score_gemma":0.0005180366,"threshold_uncertainty_score":0.99266845},"labels":[],"label_agreement":null},{"id":"W2910974671","doi":"10.3390/v11010066","title":"Expanding Repertoire of Plant Positive-Strand RNA Virus Proteases","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Proteases; Biology; Protease; RNA; NS2-3 protease; Polyproteins; Virus; TMPRSS6; Deubiquitinating enzyme; RNA virus; Cysteine protease; Biochemistry; Serine protease; Virology; Enzyme; Gene; Ubiquitin","score_opus":0.16783782464493863,"score_gpt":0.3529644377560305,"score_spread":0.18512661311109185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910974671","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002574312,0.9762913,1.2676594e-7,0.000013597544,0.00010865403,0.0012323707,0.01930076,0.000059185597,0.00041969417],"genre_scores_gemma":[0.0001326986,0.998909,0.000010598162,0.000036273952,0.0002296769,0.00011498748,0.0003469195,0.0000036122374,0.00021625718],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977857,0.00024628642,0.00054789253,0.0005084387,0.00046356645,0.00044812908],"domain_scores_gemma":[0.99815506,0.001172469,0.0003842063,0.00012280718,0.000058329595,0.000107103464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024594108,0.00042078807,0.0015774578,0.000054964512,0.00019970915,0.00006403368,0.000519592,0.00023316196,0.0002047003],"category_scores_gemma":[0.00022053218,0.00013374568,0.00043566347,0.00035573816,0.00014792512,0.00014657794,0.0002379754,0.00029211582,0.0001565006],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060013503,0.00013317904,0.000021293396,0.0043345103,0.000299024,0.000054830412,0.00002785261,1.11190815e-7,0.051475413,0.00003381377,0.0024191963,0.9411408],"study_design_scores_gemma":[0.000065104934,0.00023932791,0.000061492385,0.009521083,0.00017882773,0.000018351757,0.000029791108,3.0888745e-7,0.0049411925,0.000007673193,0.9845823,0.00035456844],"about_ca_topic_score_codex":0.001245847,"about_ca_topic_score_gemma":0.000277742,"teacher_disagreement_score":0.9821631,"about_ca_system_score_codex":0.000051208623,"about_ca_system_score_gemma":0.000055586035,"threshold_uncertainty_score":0.54539907},"labels":[],"label_agreement":null},{"id":"W2911391424","doi":"10.3390/v11020093","title":"Class A Scavenger Receptors Are Used by Frog Virus 3 During Its Cellular Entry","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science","keywords":"Biology; Ranavirus; Receptor; Virus; Scavenger receptor; Cell culture; Herpes simplex virus; Viral entry; Cell biology; Virology; Viral replication; Genetics; Biochemistry","score_opus":0.011289118929775138,"score_gpt":0.21706391563200664,"score_spread":0.2057747967022315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911391424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903005,0.00696404,0.000004953048,0.00011419818,0.0014572546,0.00025281252,0.000031832016,0.00012576759,0.0007486951],"genre_scores_gemma":[0.9809582,0.0003107008,0.000004495629,0.00023098638,0.000045195247,0.000019711493,0.000075620075,0.000028890834,0.018326152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988229,0.00023176109,0.00027845817,0.0002705722,0.000048263017,0.0003480306],"domain_scores_gemma":[0.999388,0.00008346387,0.00016387748,0.00030789172,0.000037648537,0.000019117455],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001428517,0.00018830517,0.00025777123,0.000112019414,0.00014300925,0.000025207071,0.00018739156,0.00030280827,0.0041360515],"category_scores_gemma":[0.00005639945,0.0001737233,0.00009181167,0.00011051559,0.000050342343,0.00026104227,0.00007195758,0.000248412,0.016493265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033314427,0.00006229631,0.0032241447,0.000028891372,0.000106430976,0.0000033832398,0.0003714572,0.0000027570584,0.9869296,0.00004306368,0.008655722,0.00023912633],"study_design_scores_gemma":[0.0008511728,0.000043547498,0.0013524251,0.000045876826,0.000014906894,0.0000046002788,0.00018672868,0.0000014677286,0.71735907,0.0000033325232,0.27997732,0.00015954823],"about_ca_topic_score_codex":0.00005138285,"about_ca_topic_score_gemma":0.0000051794373,"teacher_disagreement_score":0.2713216,"about_ca_system_score_codex":0.000051355968,"about_ca_system_score_gemma":0.000029815414,"threshold_uncertainty_score":0.9967743},"labels":[],"label_agreement":null},{"id":"W2911624963","doi":"10.3390/v11020105","title":"Persistent Viral Reservoirs in Lymphoid Tissues in SIV-Infected Rhesus Macaques of Chinese-Origin on Suppressive Antiretroviral Therapy","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Neurological Disorders and Stroke; National Institute of Mental Health; National Institutes of Health; Gilead Sciences","keywords":"Viremia; Biology; Virology; Simian immunodeficiency virus; Lymphatic system; Viral load; Peripheral blood mononuclear cell; Virus latency; Gut-associated lymphoid tissue; Lymph; Immunology; Virus; Viral replication; Medicine; In vitro; Pathology; Genetics","score_opus":0.02206092691350845,"score_gpt":0.30320786463551497,"score_spread":0.2811469377220065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911624963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993962,0.003536823,1.330775e-7,0.00007595653,0.00018672475,0.00046862793,0.00015098466,0.000033394288,0.0015853804],"genre_scores_gemma":[0.99823874,0.0008133663,0.000010154345,0.00007883785,0.000014339732,0.000038594415,0.00012909446,0.00001771776,0.00065918127],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853617,0.00033398205,0.00028798374,0.0003222694,0.0000810758,0.0004385242],"domain_scores_gemma":[0.99931365,0.00023033324,0.000083051906,0.00030988286,0.00003815404,0.000024939893],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012919962,0.0002132202,0.00040598912,0.00036973698,0.000038099795,0.00001248694,0.00022773977,0.0001707807,0.00080321473],"category_scores_gemma":[0.00007585612,0.00015384835,0.000111941634,0.00024496453,0.00014623224,0.00012782864,0.000061829865,0.00022594031,0.0009370214],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014341113,0.00050724245,0.71508473,0.000016833068,0.00011858868,0.000035717076,0.0007066935,0.0000246598,0.2804222,0.000085271204,0.00023606673,0.0013278995],"study_design_scores_gemma":[0.010675073,0.005402123,0.5511818,0.00017940304,0.000008937967,0.000017329941,0.00038480104,0.000011629814,0.42262617,0.00012511291,0.009057673,0.0003299715],"about_ca_topic_score_codex":0.0031907817,"about_ca_topic_score_gemma":0.00030249267,"teacher_disagreement_score":0.16390295,"about_ca_system_score_codex":0.000112718764,"about_ca_system_score_gemma":0.000081936894,"threshold_uncertainty_score":0.99984086},"labels":[],"label_agreement":null},{"id":"W2912505580","doi":"10.3390/v11020116","title":"Characterization of Host and Bacterial Contributions to Lung Barrier Dysfunction Following Co-infection with 2009 Pandemic Influenza and Methicillin Resistant Staphylococcus aureus","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canada Research Chairs; Research Manitoba","keywords":"Staphylococcus aureus; Pandemic; Influenza A virus; Immunology; Outbreak; Pathogen; Microbiology; Virulence; Medicine; Biology; Virology; Virus; Infectious disease (medical specialty); Disease; Bacteria; Coronavirus disease 2019 (COVID-19); Pathology","score_opus":0.03923500271733456,"score_gpt":0.3618936622555944,"score_spread":0.32265865953825984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912505580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973595,0.0003508467,0.00037127902,0.00005863325,0.0001360851,0.0011574463,0.00042995057,0.000062939645,0.00007332725],"genre_scores_gemma":[0.9987513,0.00020804271,0.0000857686,0.00067999784,0.00011476704,0.000059239483,0.000034300665,0.000023234474,0.000043372376],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986453,0.00012124364,0.00032159843,0.0003007767,0.00034238235,0.00026870635],"domain_scores_gemma":[0.99907535,0.00014642577,0.00012261767,0.00020758397,0.00029948857,0.00014852884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000544044,0.00018263356,0.0004081909,0.00027282446,0.00017299157,0.00004472461,0.00003110433,0.00012562933,0.00005575579],"category_scores_gemma":[0.00053935545,0.00014305471,0.00004244205,0.00027707458,0.00009816248,0.00029415343,0.000050915703,0.00019924855,0.000012829372],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002061759,0.000022719789,0.30829987,0.000097846925,0.00016382027,0.0000022378413,0.00024521182,0.0000025638308,0.68886846,0.000045729266,0.000029924848,0.00015984858],"study_design_scores_gemma":[0.0032509326,0.0010388594,0.73548627,0.00033943157,0.00019446183,0.0000020039645,0.00008594306,0.00003793461,0.23861334,0.0000064940778,0.020752735,0.00019156157],"about_ca_topic_score_codex":0.00036875514,"about_ca_topic_score_gemma":0.00009997918,"teacher_disagreement_score":0.45025513,"about_ca_system_score_codex":0.00012525743,"about_ca_system_score_gemma":0.000118737094,"threshold_uncertainty_score":0.5833602},"labels":[],"label_agreement":null},{"id":"W2912562972","doi":"10.3390/v11020092","title":"Human Polyclonal Antibodies Produced from Transchromosomal Bovine Provides Prophylactic and Therapeutic Protections Against Zika Virus Infection in STAT2 KO Syrian Hamsters","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Utah Agricultural Experiment Station","keywords":"Zika virus; Polyclonal antibodies; Virology; Antibody; Immunology; Medicine; Microcephaly; Virus; Biology","score_opus":0.018222746944952076,"score_gpt":0.2778530797784357,"score_spread":0.25963033283348363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912562972","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952474,0.0013391754,0.000018425144,0.0004342601,0.00018116653,0.0023666956,0.000110862384,0.00013779548,0.00016419275],"genre_scores_gemma":[0.9984588,0.00009131843,0.000036168865,0.00073933875,0.00022821034,0.0002291192,0.000035338893,0.000046039127,0.00013568651],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984169,0.00011043362,0.00035205396,0.00053640094,0.0002558258,0.00032836644],"domain_scores_gemma":[0.9993187,0.000040027917,0.00011576952,0.00033651057,0.000059370628,0.00012962677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010801538,0.00027137055,0.00041918692,0.00021132949,0.00015238384,0.000089364796,0.000063839536,0.00009926735,0.00013678228],"category_scores_gemma":[0.000041886073,0.00022516116,0.00010079091,0.00020921754,0.0001049093,0.00026465813,0.000023663786,0.0002674012,0.000033264387],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095445267,0.00045695785,0.3262848,0.00026701076,0.00013778181,0.000023808532,0.00037547853,0.000013437947,0.6633508,0.00005024608,0.000010136348,0.008075112],"study_design_scores_gemma":[0.004734711,0.0017334613,0.9447579,0.00034636378,0.00028929618,0.0000140110615,0.00021159489,0.00036812475,0.045674097,0.00016524554,0.0013117908,0.00039339677],"about_ca_topic_score_codex":0.0044259867,"about_ca_topic_score_gemma":0.0014286768,"teacher_disagreement_score":0.6184731,"about_ca_system_score_codex":0.0000740335,"about_ca_system_score_gemma":0.00015242759,"threshold_uncertainty_score":0.9181806},"labels":[],"label_agreement":null},{"id":"W2913613802","doi":"10.3390/v11020152","title":"Interferon Regulatory Factor 3-Mediated Signaling Limits Middle-East Respiratory Syndrome (MERS) Coronavirus Propagation in Cells from an Insectivorous Bat","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"IRF3; Biology; Interferon; Virology; Middle East respiratory syndrome coronavirus; Sendai virus; Coronavirus; Immunology; Virus; Innate immune system; Cell biology; Disease; Medicine; Immune system; Infectious disease (medical specialty)","score_opus":0.09508576568278496,"score_gpt":0.30070975033517194,"score_spread":0.205623984652387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913613802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99763185,0.00041343493,0.000026426407,0.000016453312,0.0007386718,0.00071980245,0.00009779775,0.00019635314,0.0001592218],"genre_scores_gemma":[0.9988339,0.000015433558,0.000040853814,0.00069522904,0.00014394781,0.00003172485,0.0000610186,0.00006717603,0.00011070533],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99820226,0.00017966705,0.0004706732,0.0005165229,0.0003023695,0.000328502],"domain_scores_gemma":[0.998998,0.00010622507,0.0001661071,0.0004583351,0.000084006926,0.00018736393],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001787377,0.00028351572,0.00043469612,0.000385944,0.00006848455,0.00004678989,0.00011762958,0.0002499516,0.00077070884],"category_scores_gemma":[0.000058899812,0.00025775147,0.000084456085,0.00035233033,0.000071284165,0.00057071773,0.000038705763,0.00041216493,0.00062300236],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039904364,0.00032295962,0.15485689,0.000052977888,0.000050864364,0.000057114205,0.00069081143,0.00008157182,0.8420141,0.000009246036,0.000023281402,0.0014411538],"study_design_scores_gemma":[0.0029652503,0.0036062317,0.62722844,0.00087427394,0.00007658896,0.000030461135,0.00074099284,0.0005658258,0.36176994,0.000021229243,0.0015376,0.0005831409],"about_ca_topic_score_codex":0.0015227272,"about_ca_topic_score_gemma":0.00055462256,"teacher_disagreement_score":0.48024413,"about_ca_system_score_codex":0.0003282521,"about_ca_system_score_gemma":0.00014132592,"threshold_uncertainty_score":0.9999875},"labels":[],"label_agreement":null},{"id":"W2914273570","doi":"10.3390/v11020141","title":"Metabolic Reprogramming of the Host Cell by Human Adenovirus Infection","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Schulich School of Medicine and Dentistry; Canadian Institutes of Health Research","keywords":"Reprogramming; Biology; Viral replication; Cellular metabolism; Obligate; Transcriptome; Cell biology; Cancer cell; Metabolic pathway; Metabolism; Virus; Cell; Cancer; Virology; Genetics; Gene expression; Biochemistry; Gene","score_opus":0.043132320225811156,"score_gpt":0.3291307251137525,"score_spread":0.28599840488794137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914273570","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020663508,0.9948466,0.000010575941,0.000001503182,0.001655325,0.00059440476,0.0001767231,0.000014133156,0.00063440466],"genre_scores_gemma":[0.00030109545,0.9963535,0.000018805851,0.00009629749,0.0012737913,0.00007634383,0.00011918234,0.00006735587,0.0016936111],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985078,0.00015682461,0.00044430542,0.00047755666,0.00016807562,0.00024542343],"domain_scores_gemma":[0.99842465,0.000013552687,0.00053947244,0.00091857434,0.000055022927,0.000048706606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017894788,0.00033178908,0.000853514,0.00006542796,0.00009189517,0.000029801547,0.0003583075,0.00039602624,0.000025918445],"category_scores_gemma":[0.00004708614,0.00023326621,0.0006364744,0.00021114889,0.00010025062,0.0000044092117,0.00021830152,0.00022096878,0.00002967876],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009042384,0.00016025045,0.00010140211,0.0052638524,0.00033797298,1.8129278e-7,0.000022570704,6.8009535e-7,0.19300318,0.00006953819,0.013903654,0.7871277],"study_design_scores_gemma":[0.00015651078,0.000047050828,0.000029928746,0.0004078711,0.00076071895,0.000005383584,0.0000027107053,2.1010472e-8,0.043150965,0.0000016823379,0.95519185,0.00024529346],"about_ca_topic_score_codex":0.00044301574,"about_ca_topic_score_gemma":0.000054261214,"teacher_disagreement_score":0.94128823,"about_ca_system_score_codex":0.000012076651,"about_ca_system_score_gemma":0.00018547576,"threshold_uncertainty_score":0.95123196},"labels":[],"label_agreement":null},{"id":"W2914727986","doi":"10.3390/v11020122","title":"Back to the Future for Influenza Preimmunity—Looking Back at Influenza Virus History to Infer the Outcome of Future Infections","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Office of Extramural Research, National Institutes of Health; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Nova Scotia Health Research Foundation","keywords":"Virus; Original antigenic sin; Virology; Antigenic drift; Biology; Antigenic shift; Immune system; Pandemic; Vaccination; Influenza A virus; Immunology; Infectious disease (medical specialty); Medicine; Disease; Coronavirus disease 2019 (COVID-19)","score_opus":0.2891383036429608,"score_gpt":0.46131835934771653,"score_spread":0.17218005570475575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914727986","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00061637844,0.9820553,0.000021493814,0.00059608475,0.0026382082,0.010595888,0.0008802134,0.00008707638,0.0025093646],"genre_scores_gemma":[0.0000047224926,0.95467734,0.00031949586,0.031915836,0.00407403,0.0022999342,0.000050902363,0.00032500637,0.0063327407],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99443716,0.0006392466,0.001918581,0.00085139694,0.0010509469,0.0011026802],"domain_scores_gemma":[0.9930707,0.001859868,0.0008252845,0.0030760278,0.0008088819,0.0003591908],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013806424,0.0011675869,0.0032819833,0.0008231146,0.0006689152,0.0000765009,0.0014642505,0.00075756176,0.0013315774],"category_scores_gemma":[0.0015106292,0.000628812,0.0014598378,0.0012020669,0.00043557637,0.00023898741,0.0017780577,0.0018505107,0.0068276157],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012541261,0.0006296837,0.006592747,0.06936764,0.005717175,0.000008636059,0.0067272796,0.00021955499,0.00019466634,0.0011635434,0.60898894,0.29913598],"study_design_scores_gemma":[0.0008412348,0.0006022297,0.0005668002,0.0045544785,0.0017136374,0.000023541581,0.00024506892,9.2819306e-7,0.00003123226,0.000004077956,0.99078554,0.00063125207],"about_ca_topic_score_codex":0.00043698197,"about_ca_topic_score_gemma":0.0010994241,"teacher_disagreement_score":0.38179657,"about_ca_system_score_codex":0.0021001217,"about_ca_system_score_gemma":0.00093501166,"threshold_uncertainty_score":0.9996163},"labels":[],"label_agreement":null},{"id":"W2914759262","doi":"10.3390/v11080677","title":"Viral Long-Term Evolutionary Strategies Favor Stability over Proliferation","year":2019,"lang":"en","type":"preprint","venue":"Viruses","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Viral evolution; Biology; Selection (genetic algorithm); Mutation; Evolutionary biology; Viral replication; Virus; Mutation rate; Genetics; Genome; Rate of evolution; RNA; Molecular evolution; DNA; Gene; Phylogenetics","score_opus":0.022685091260596504,"score_gpt":0.29715174054694393,"score_spread":0.27446664928634745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914759262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98545045,0.0020954637,0.009354481,0.000049728573,0.0007857969,0.00062302995,0.0003715598,0.000049925213,0.0012195477],"genre_scores_gemma":[0.9957703,0.0004694175,0.0004941787,0.00038263696,0.00049968687,0.0000652427,0.0016766562,0.000037166,0.0006047618],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983583,0.00012636138,0.00033584086,0.00067958084,0.00023363142,0.00026627094],"domain_scores_gemma":[0.9988004,0.000010241799,0.00017255513,0.0007986308,0.00014388774,0.000074299816],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014292484,0.00031541788,0.00023626424,0.000054713917,0.00007776699,0.000107821936,0.00028826314,0.0005379715,0.00011677981],"category_scores_gemma":[0.000047534653,0.00031631897,0.00016467941,0.000038575407,0.00013609735,0.000010818727,0.0005648029,0.0002765137,0.000060042676],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051131006,0.00058074255,0.57898337,0.0008112967,0.00036651408,0.0000056063536,0.00013962566,0.0218958,0.3878614,0.0019655258,0.0060677836,0.0008110506],"study_design_scores_gemma":[0.0010927962,0.00052667304,0.9436384,0.00011780814,0.000120640296,0.000014116754,0.00010348144,0.005553935,0.03690718,0.0017740036,0.00882154,0.0013294391],"about_ca_topic_score_codex":0.000043859724,"about_ca_topic_score_gemma":0.0001888722,"teacher_disagreement_score":0.36465502,"about_ca_system_score_codex":0.000066926004,"about_ca_system_score_gemma":0.00068500807,"threshold_uncertainty_score":0.9999289},"labels":[],"label_agreement":null},{"id":"W2915545530","doi":"10.3390/v11020192","title":"Immune System Modulation and Viral Persistence in Bats: Understanding Viral Spillover","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; University of Saskatchewan","keywords":"Immune system; Persistence (discontinuity); Virology; Biology; Spillover effect; Immune modulation; Modulation (music); Viral infection; Immunology; Virus; Physics; Geology","score_opus":0.21697323124530501,"score_gpt":0.36052105191599015,"score_spread":0.14354782067068514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915545530","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021159227,0.9945991,0.00016491977,0.000006643338,0.0005138403,0.0008173954,0.000025548237,0.00007305634,0.0016835534],"genre_scores_gemma":[0.081592545,0.91778374,0.000045357807,0.000033218817,0.00015898673,0.00002490779,0.00003501345,0.000050045433,0.0002761854],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986473,0.000086244094,0.0005047399,0.00036219927,0.00016970628,0.00022984308],"domain_scores_gemma":[0.99935436,0.00006910403,0.00020405355,0.00029126374,0.000019835436,0.00006137576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019047152,0.00030632,0.0012164299,0.00041774526,0.00007293505,0.000051233405,0.00006203312,0.0002699247,0.000034967718],"category_scores_gemma":[0.00003659794,0.00023693399,0.00025640827,0.00028268533,0.000060221573,0.00021213242,0.0000566524,0.00032016984,0.00009544972],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003063115,0.0006047475,0.013092213,0.27149254,0.0018723338,0.00033633618,0.0008499463,0.000098979195,0.0007434668,0.040720128,0.0005801413,0.6693029],"study_design_scores_gemma":[0.0023065717,0.0010730772,0.002290571,0.11153214,0.003135466,0.00063930283,0.0011700506,0.0022164988,0.000019138504,0.000066860935,0.8741321,0.0014182302],"about_ca_topic_score_codex":0.00025166606,"about_ca_topic_score_gemma":0.000014842602,"teacher_disagreement_score":0.87355196,"about_ca_system_score_codex":0.0008951878,"about_ca_system_score_gemma":0.00010773671,"threshold_uncertainty_score":0.9661888},"labels":[],"label_agreement":null},{"id":"W2915986561","doi":"10.3390/v11020194","title":"Priorities, Barriers, and Facilitators towards International Guidelines for the Delivery of Supportive Clinical Care during an Ebola Outbreak: A Cross-Sectional Survey","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Health Sciences Centre; University of Toronto; St. Michael's Hospital; Western University; University of British Columbia; Hôpital Charles-Le Moyne; Université de Sherbrooke; Sunnybrook Health Science Centre; Centre Hospitalier Universitaire de Sherbrooke","funders":"Institute of Population and Public Health; Canadian Institutes of Health Research","keywords":"Medicine; Ebola virus; Outbreak; Psychological intervention; Family medicine; Cross-sectional study; Documentation; Health care; Nursing; Medical emergency","score_opus":0.17483682315113205,"score_gpt":0.48171888820760034,"score_spread":0.3068820650564683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915986561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99685144,0.0004546009,0.000060590228,0.00008142681,0.00060856185,0.00046549994,0.0013355919,0.000024242812,0.00011804386],"genre_scores_gemma":[0.9983294,0.00023913763,0.00017789287,0.00021619398,0.00030145812,0.00002856779,0.00008703459,0.000014988532,0.0006053055],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863946,0.00008807348,0.0005060248,0.00027830852,0.00031214766,0.00017596743],"domain_scores_gemma":[0.99771535,0.00032153144,0.00008796964,0.00019586802,0.0015468568,0.00013241591],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089415826,0.00011351381,0.00023506164,0.000111652655,0.00014353612,0.000054543114,0.0001125269,0.000103656916,0.00033604272],"category_scores_gemma":[0.0011761237,0.00007764812,0.00013342132,0.00008993866,0.00023950145,0.0002097907,0.00010451141,0.00016442232,0.000007271619],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00084545463,0.000025197498,0.9935871,0.000060325092,0.00015212905,0.000001496201,0.00016718017,0.000013187121,0.001465669,0.00003594557,0.00025182441,0.0033945239],"study_design_scores_gemma":[0.0014562925,0.0004510427,0.98881567,0.000022330234,0.000017805307,0.00001605704,0.0010790608,0.00027160152,0.0023053475,0.00001047705,0.005471341,0.0000829562],"about_ca_topic_score_codex":0.0025380612,"about_ca_topic_score_gemma":0.0003632677,"teacher_disagreement_score":0.0052195163,"about_ca_system_score_codex":0.000058842183,"about_ca_system_score_gemma":0.00032149072,"threshold_uncertainty_score":0.3836806},"labels":[],"label_agreement":null},{"id":"W2916548906","doi":"10.3390/v11020193","title":"In Vivo Characterization of Avian Influenza A (H5N1) and (H7N9) Viruses Isolated from Canadian Travelers","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Shared Health; University of Saskatchewan","funders":"Public Health Agency of Canada; Canadian Food Inspection Agency; University of Arizona Cancer Center","keywords":"Influenza A virus subtype H5N1; Virology; Biology; Proinflammatory cytokine; Pandemic; Influenza A virus; Virus; Virulence; Microbiology; Immunology; Gene; Disease; Infectious disease (medical specialty); Medicine; Genetics; Coronavirus disease 2019 (COVID-19); Inflammation; Pathology","score_opus":0.05262314402613478,"score_gpt":0.33119305891039824,"score_spread":0.27856991488426347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2916548906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99748254,0.00035293,0.000002633445,0.00017974127,0.00009430024,0.0005948262,0.00036872763,0.000028199693,0.0008961106],"genre_scores_gemma":[0.9922051,0.0002541346,0.000059622318,0.007202819,0.000059146703,0.000020933536,0.000012548726,0.000033196015,0.00015248707],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985796,0.000061889754,0.00039012908,0.0003021573,0.000268436,0.00039779165],"domain_scores_gemma":[0.99918807,0.00009841412,0.00009748806,0.00028369864,0.00010722189,0.00022511261],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014527624,0.00019262913,0.00044664548,0.0005337301,0.00005225529,0.000024329187,0.00009935968,0.00013964431,0.0009221432],"category_scores_gemma":[0.00018314396,0.00017626901,0.000041600553,0.00039080263,0.00013018926,0.00032445844,0.000050263297,0.00020922312,0.00013370047],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000338118,0.00003726362,0.43377072,0.00006043298,0.000079132304,0.000020826925,0.001219442,0.0000015771344,0.563884,0.00004713984,0.00009107927,0.0004502861],"study_design_scores_gemma":[0.0023472456,0.00028910098,0.8283979,0.00030033142,0.000040606206,0.000003852513,0.00028128293,0.00017831053,0.11932355,0.000038858878,0.048563886,0.0002350617],"about_ca_topic_score_codex":0.1883838,"about_ca_topic_score_gemma":0.045479782,"teacher_disagreement_score":0.44456044,"about_ca_system_score_codex":0.00013662392,"about_ca_system_score_gemma":0.00025736788,"threshold_uncertainty_score":0.9999912},"labels":[],"label_agreement":null},{"id":"W2916569843","doi":"10.3390/v11020168","title":"Myeloid Cells during Viral Infections and Inflammation","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Terry Fox Research Institute","keywords":"Myeloid; Myeloid cells; Inflammation; Immunology; Innate immune system; Biology; Immune system; Cytokine storm; Medicine; Disease; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19)","score_opus":0.03664659849844389,"score_gpt":0.30292249731560034,"score_spread":0.26627589881715646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2916569843","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011463864,0.9945508,0.0000031653124,0.0000026735474,0.002682605,0.0004805644,0.000056383724,0.00007996097,0.0009974508],"genre_scores_gemma":[0.000055471362,0.99453825,0.000009422008,0.000022829418,0.00011890736,0.000074650925,0.00007598284,0.000044593733,0.0050598998],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988358,0.00018295221,0.00039700628,0.00031019142,0.000021836557,0.0002521973],"domain_scores_gemma":[0.99917716,0.0001706593,0.00026528453,0.00035274538,0.000024130513,0.0000100130155],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009478003,0.0003011988,0.0008015005,0.00021243871,0.00015955829,0.0000291009,0.00015666378,0.0005540724,0.0006143046],"category_scores_gemma":[0.000027161723,0.00025976234,0.00016160255,0.000106363936,0.00013094817,0.00013712078,0.00016814504,0.0004901669,0.0052540586],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011409432,0.00003376754,0.000020747779,0.012322275,0.00052045065,0.0000027026572,0.00009967996,0.00000201175,0.032252695,0.00016688425,0.00148272,0.95308465],"study_design_scores_gemma":[0.00022740361,0.00003450435,0.000010172429,0.0020080435,0.00037386065,0.00005615823,0.000005087031,2.8768866e-8,0.013576386,0.0000069213293,0.98343337,0.00026806272],"about_ca_topic_score_codex":0.000050811075,"about_ca_topic_score_gemma":0.000005691038,"teacher_disagreement_score":0.98195064,"about_ca_system_score_codex":0.0000921623,"about_ca_system_score_gemma":0.00011239015,"threshold_uncertainty_score":0.99998546},"labels":[],"label_agreement":null},{"id":"W2917162773","doi":"10.3390/v11020183","title":"Development and Characterization of a Sin Nombre Virus Transmission Model in Peromyscus maniculatus","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec; Public Health Agency of Canada; University of Manitoba","funders":"","keywords":"Peromyscus; Biology; Hantavirus; Deer mouse; Virology; Transmission (telecommunications); Virus; Rodent; Viral replication; Zoology; Ecology","score_opus":0.028284803666999852,"score_gpt":0.2693385367482651,"score_spread":0.24105373308126524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2917162773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898726,0.000060362774,0.00044615116,0.000037296384,0.000028413282,0.00019614032,0.0000037050686,0.000017134731,0.00022353965],"genre_scores_gemma":[0.9987043,0.00007714883,0.00084163365,0.00012683333,0.000008154622,0.000006033037,0.000012070703,0.000009422319,0.00021436876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995499,0.000008632631,0.00016909865,0.00011595615,0.00007415511,0.00008221394],"domain_scores_gemma":[0.9998301,0.000005081612,0.000034494486,0.000075658165,0.000017515713,0.000037124813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005024648,0.000070009555,0.00014870998,0.00010696479,0.000017146589,0.000005022944,0.000015579672,0.000052555795,0.00006579272],"category_scores_gemma":[0.0000027820956,0.00005524019,0.000019297982,0.00010202532,0.000009413407,0.00009046064,0.000009757335,0.00005625935,0.000012776738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007177694,0.000111206245,0.021077367,0.00007696523,0.000009019787,0.0000017697628,0.0005908755,0.000037392903,0.9668396,0.00006923488,0.0000027763779,0.011112006],"study_design_scores_gemma":[0.001794445,0.0002125931,0.473331,0.00039725436,0.000031091815,0.000015697718,0.000071304086,0.018169304,0.49565777,0.000018051147,0.010113534,0.00018795615],"about_ca_topic_score_codex":0.00007586993,"about_ca_topic_score_gemma":0.000019010786,"teacher_disagreement_score":0.47118184,"about_ca_system_score_codex":0.000034542958,"about_ca_system_score_gemma":0.000049138387,"threshold_uncertainty_score":0.22526295},"labels":[],"label_agreement":null},{"id":"W2920529134","doi":"10.3390/v11030206","title":"A Diacylglycerol Kinase Inhibitor, R-59-022, Blocks Filovirus Internalization in Host Cells","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; Institute of Infection and Immunity; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Ebola virus; Internalization; Virology; Viral entry; Biology; Vero cell; Marburg virus; Diacylglycerol kinase; Viral replication; Cell biology; Virus; Kinase; Receptor; Protein kinase C","score_opus":0.022689204615632834,"score_gpt":0.31247292452831443,"score_spread":0.2897837199126816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920529134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992337,0.00024979986,0.00010920449,0.000114138784,0.00038507654,0.0004963738,0.000020079135,0.000065187014,0.0062231617],"genre_scores_gemma":[0.9956697,0.00016894488,0.000047823283,0.0009968175,0.0001955569,0.0000306405,0.000011676847,0.000028613777,0.0028501789],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885005,0.000054188422,0.00026407634,0.0002690004,0.0002768261,0.00028587948],"domain_scores_gemma":[0.9994244,0.00006191123,0.0000499757,0.000267349,0.000077562974,0.00011881728],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016479215,0.00014228428,0.00023881375,0.00035706122,0.000038986975,0.000049761762,0.000079531565,0.00010647822,0.00222508],"category_scores_gemma":[0.000061636005,0.00012077674,0.00007805526,0.00042517745,0.000044361663,0.00018252917,0.00008231878,0.000273887,0.0014808453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042446418,0.00045767744,0.19618177,0.0000933257,0.00003325822,0.00008790358,0.0002044996,0.000055782246,0.7950668,0.0001258162,0.00347681,0.0037919157],"study_design_scores_gemma":[0.0039645745,0.0009801971,0.033651985,0.0004397281,0.000034977427,0.000031970863,0.0001674628,0.0015276116,0.8514271,0.00004763371,0.107417956,0.00030882497],"about_ca_topic_score_codex":0.0018142223,"about_ca_topic_score_gemma":0.00018803324,"teacher_disagreement_score":0.1625298,"about_ca_system_score_codex":0.000114176226,"about_ca_system_score_gemma":0.0000746084,"threshold_uncertainty_score":0.9992966},"labels":[],"label_agreement":null},{"id":"W2921882543","doi":"10.3390/v11030239","title":"Cytomegalovirus-Driven Adaption of Natural Killer Cells in NKG2Cnull Human Immunodeficiency Virus-Infected Individuals","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Memorial University of Newfoundland; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research; Beatrice Hunter Cancer Research Institute; Cancer Research Institute","keywords":"Virology; Cytomegalovirus; Human immunodeficiency virus (HIV); Human cytomegalovirus; Virus; Biology; Immunology; Viral disease; Herpesviridae","score_opus":0.014460718089776564,"score_gpt":0.2521156925931339,"score_spread":0.23765497450335732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921882543","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887935,0.0011617655,0.00001130364,0.000013323354,0.0064430335,0.00032524645,0.000011296113,0.00008263282,0.0031579048],"genre_scores_gemma":[0.99256724,0.00010765633,0.000016867296,0.00023896385,0.000016744994,0.000013721911,0.00012533036,0.000023068313,0.0068904064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851364,0.00022574743,0.00055541797,0.00031199446,0.00006870572,0.00032448914],"domain_scores_gemma":[0.999166,0.000112766626,0.00027909174,0.00034403618,0.000086685504,0.000011418675],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020450102,0.00021679456,0.0003617457,0.00045642952,0.00009453466,0.00001887671,0.000226575,0.00025101326,0.0051652067],"category_scores_gemma":[0.000037208694,0.00019923228,0.00012607567,0.0003120925,0.00011243057,0.00039381898,0.00009232188,0.00045407226,0.003994761],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016251492,0.00025909708,0.014764603,0.000016362363,0.00006653994,6.8045495e-7,0.00037750168,0.000058744215,0.9804185,0.00040415433,0.0031628164,0.00030849339],"study_design_scores_gemma":[0.0017326374,0.00034671955,0.06662536,0.00008210894,0.000023585644,0.000009449167,0.00026581855,0.000017450671,0.8264697,0.000019882835,0.10413994,0.0002673626],"about_ca_topic_score_codex":0.0009873318,"about_ca_topic_score_gemma":0.000070480666,"teacher_disagreement_score":0.1539488,"about_ca_system_score_codex":0.00008135082,"about_ca_system_score_gemma":0.000038523332,"threshold_uncertainty_score":0.99678075},"labels":[],"label_agreement":null},{"id":"W2922016800","doi":"10.3390/v11030269","title":"Cat and Mouse: HIV Transcription in Latency, Immune Evasion and Cure/Remission Strategies","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Evasion (ethics); Latency (audio); Immune system; Immunology; Transcription (linguistics); Human immunodeficiency virus (HIV); Biology; Virology; Medicine; Computer science","score_opus":0.08129764134945595,"score_gpt":0.35068034737194936,"score_spread":0.2693827060224934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922016800","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0072770338,0.9914651,0.0000021861408,0.000021924614,0.00011576355,0.00063779677,0.00020544278,0.00003254759,0.00024222094],"genre_scores_gemma":[0.0015595915,0.99571496,0.000012067624,0.000007576165,0.000011201908,0.000054948447,0.00057120173,0.000024946003,0.0020435243],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986397,0.00030138306,0.00033541518,0.00038185675,0.000038066282,0.00030358593],"domain_scores_gemma":[0.99952894,0.00011192329,0.00009020512,0.0002210015,0.000016935044,0.00003097978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016650053,0.00030392816,0.0008600629,0.0002137559,0.00009006737,0.000041160907,0.00010779797,0.00046623556,0.00018508954],"category_scores_gemma":[0.000016528957,0.00020632018,0.000090767,0.0000882964,0.0001277306,0.00013100616,0.00006138868,0.00032500428,0.00054727297],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010683263,0.00020913061,0.00020482199,0.008828425,0.0002867935,0.000028600418,0.00031344756,2.4551383e-7,0.04733417,0.00021647934,0.00088380853,0.94158727],"study_design_scores_gemma":[0.0008462389,0.00018109132,0.00020924195,0.0037551713,0.00018402241,0.00006379144,0.00009316037,2.3897465e-7,0.00065830647,0.000027528327,0.9937591,0.00022208554],"about_ca_topic_score_codex":0.0003831557,"about_ca_topic_score_gemma":0.00007606726,"teacher_disagreement_score":0.99287534,"about_ca_system_score_codex":0.000059113834,"about_ca_system_score_gemma":0.00017885602,"threshold_uncertainty_score":0.8413493},"labels":[],"label_agreement":null},{"id":"W2922116967","doi":"10.3390/v11030259","title":"Generation and Characterization of Anti-Filovirus Nucleoprotein Monoclonal Antibodies","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Ebola virus; Virology; Nucleoprotein; Monoclonal antibody; Marburg virus; Epitope; Ebolavirus; Biology; Filoviridae; Epitope mapping; Viral replication; Antibody; Virus; Paramyxoviridae; Viral disease; Immunology","score_opus":0.058958898767603796,"score_gpt":0.32885713516195975,"score_spread":0.26989823639435595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922116967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988314,0.00008288141,0.00008469167,0.00010360525,0.00007046939,0.00026022474,0.000021268756,0.000021834312,0.0005236335],"genre_scores_gemma":[0.9987909,0.00030204316,0.00019414454,0.0001735319,0.0001066165,0.000004840921,0.000032621974,0.000009756569,0.00038552206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995092,0.000019408408,0.00013261307,0.00012171258,0.00012670548,0.000090347035],"domain_scores_gemma":[0.9997372,0.000008905117,0.000043661992,0.000099973266,0.000074132746,0.000036100373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007623309,0.000061997955,0.00014731295,0.00011211538,0.000038967613,0.00001817497,0.000018190543,0.000045265082,0.00029459747],"category_scores_gemma":[0.000014534761,0.00005057617,0.000024974606,0.00010454262,0.000042363215,0.00016002364,0.000024325274,0.000059435602,0.00007587748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030070492,0.000042305466,0.1387076,0.00004704072,0.000016953154,0.0000011867656,0.000032127293,0.000001310948,0.8565954,0.00024635257,0.000028862463,0.0042507923],"study_design_scores_gemma":[0.00032085646,0.00017317824,0.38895738,0.000028617027,0.000010508845,0.0000088654615,0.000010632106,0.00091588934,0.60763353,0.000005604327,0.0018897267,0.000045221004],"about_ca_topic_score_codex":0.000140761,"about_ca_topic_score_gemma":0.0000041226153,"teacher_disagreement_score":0.2502498,"about_ca_system_score_codex":0.000009396034,"about_ca_system_score_gemma":0.000026239204,"threshold_uncertainty_score":0.3225636},"labels":[],"label_agreement":null},{"id":"W2923032274","doi":"10.3390/v11030299","title":"Metagenomes of a Freshwater Charavirus from British Columbia Provide a Window into Ancient Lineages of Viruses","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Human virome; Genome; Genetics; Gene","score_opus":0.012109135063572815,"score_gpt":0.23265679446383553,"score_spread":0.22054765940026272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2923032274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99785346,0.00034556605,0.000015337033,0.000019278203,0.00026995744,0.0003346482,0.0007123787,0.000028351862,0.00042105388],"genre_scores_gemma":[0.99596626,0.000083930536,0.0015994706,0.0008685865,0.00004050241,0.000018959747,0.000013895269,0.000022951594,0.0013854448],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988256,0.00004687886,0.00039728385,0.0003320644,0.0001840613,0.00021413031],"domain_scores_gemma":[0.99928975,0.00006385753,0.00022463565,0.00033316255,0.000020833346,0.0000677513],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009526769,0.00012001882,0.00032827628,0.000028901724,0.00006056614,0.00010035138,0.00027770322,0.00006896007,0.022405123],"category_scores_gemma":[0.000029057603,0.00014558242,0.00012471968,0.0001509622,0.00020156839,0.00040989704,0.00024040868,0.0000971984,0.00060499046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002330457,0.00016406811,0.08623476,0.00002008345,0.00004851623,0.0000042132783,0.0004548401,0.00001971148,0.9068199,8.8293376e-7,0.0033021907,0.0029075178],"study_design_scores_gemma":[0.00031937365,0.000120502234,0.3450455,0.00006190353,0.000040790896,0.000004068731,0.000074167576,0.000010231334,0.49403423,0.000038618906,0.16008437,0.00016623909],"about_ca_topic_score_codex":0.33471495,"about_ca_topic_score_gemma":0.20899183,"teacher_disagreement_score":0.41278568,"about_ca_system_score_codex":0.000056035806,"about_ca_system_score_gemma":0.000018165092,"threshold_uncertainty_score":0.9784885},"labels":[],"label_agreement":null},{"id":"W2924845328","doi":"10.3390/v11030276","title":"Localization of Frog Virus 3 Conserved Viral Proteins 88R, 91R, and 94L","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"ORFS; Biology; Viral replication; Gene; Conserved sequence; Genome; Genetics; Open reading frame; Viral protein; Cell biology; Virus; Virology; Peptide sequence","score_opus":0.011521348484552031,"score_gpt":0.233055400266586,"score_spread":0.22153405178203397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924845328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99663395,0.000048904418,0.00034258128,0.000036927413,0.00013474181,0.00022865234,0.0000333425,0.000021236316,0.002519638],"genre_scores_gemma":[0.99832314,0.00004181951,0.00032611014,0.00048221578,0.00001299873,0.000006854737,0.0000048124925,0.000008938761,0.0007930881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99952877,0.000024547931,0.00013530861,0.00014675349,0.000064089,0.00010053266],"domain_scores_gemma":[0.99974716,0.00001559538,0.000067964174,0.00012949106,0.0000058349574,0.000033929216],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000043035216,0.000072605544,0.000098221426,0.00001863794,0.000043128017,0.00002021113,0.00006625413,0.000040870676,0.004224654],"category_scores_gemma":[0.000011338571,0.00006476303,0.000024542976,0.00006577102,0.000099156394,0.0002524517,0.00008452508,0.000047662244,0.00060857297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025090672,0.00005227922,0.01801356,0.000009774373,0.000006722598,6.588046e-7,0.00010444021,0.000046456476,0.9797976,0.00005651281,0.0007417307,0.0011451792],"study_design_scores_gemma":[0.00047761077,0.00017804418,0.07975744,0.000041431027,0.000017746363,0.000007968705,0.000066114866,0.00049038,0.7901043,0.0001210732,0.12855616,0.00018169184],"about_ca_topic_score_codex":0.003238865,"about_ca_topic_score_gemma":0.00043551726,"teacher_disagreement_score":0.18969326,"about_ca_system_score_codex":0.00002346139,"about_ca_system_score_gemma":0.000005144666,"threshold_uncertainty_score":0.9966856},"labels":[],"label_agreement":null},{"id":"W2930305042","doi":"10.3390/v11040310","title":"African Swine Fever Status in Europe","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":274,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Global Institute for Water Security, University of Saskatchewan","keywords":"Wild boar; Outbreak; African swine fever; African swine fever virus; Western europe; Domestic pig; Transmission (telecommunications); Population; Geography; Virus; Socioeconomics; Veterinary medicine; Virology; Biology; Environmental health; European union; Medicine; Forestry","score_opus":0.21018609343954514,"score_gpt":0.3463760798495325,"score_spread":0.13618998640998736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2930305042","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005565745,0.99119735,8.306324e-8,0.000056049666,0.00013130413,0.00036802026,0.00012776614,0.000051370633,0.0075114844],"genre_scores_gemma":[0.00013633832,0.9976199,0.0000055562955,0.0005889114,0.00023509814,0.000027782198,0.00019395076,0.0000023362736,0.0011901205],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998439,0.00027243973,0.00036856259,0.00040299728,0.00009715927,0.00041985433],"domain_scores_gemma":[0.99932116,0.00033400097,0.00016514485,0.000074360425,0.0000189576,0.000086345004],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018268492,0.0002613077,0.0009362889,0.000033624732,0.00003688231,0.000029954552,0.0003223573,0.00013470261,0.0012424354],"category_scores_gemma":[0.00015699287,0.00008147136,0.00017727308,0.00069654826,0.000037892387,0.00007416589,0.00020755519,0.00016621173,0.0022168248],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000065546824,0.00004497401,0.001136381,0.0006870137,0.000026496684,0.0000146825805,0.0000036356419,1.9386945e-7,0.0000061486926,0.0004247852,0.008729755,0.9889194],"study_design_scores_gemma":[0.00002956886,0.00005992771,0.00775652,0.0005526014,0.00009561968,4.978091e-7,0.000010972278,7.999933e-7,4.5893206e-8,0.000021649914,0.9912489,0.00022289819],"about_ca_topic_score_codex":0.0005520011,"about_ca_topic_score_gemma":0.00026778918,"teacher_disagreement_score":0.98869646,"about_ca_system_score_codex":0.00003022916,"about_ca_system_score_gemma":0.000018447477,"threshold_uncertainty_score":0.99967057},"labels":[],"label_agreement":null},{"id":"W2932144479","doi":"10.3390/v11040308","title":"Molecular Characterization and Evolutionary Analyses of Carnivore Protoparvovirus 1 NS1 Gene","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Ministero della Salute","keywords":"Biology; Genetics; Carnivore; Gene; Canine parvovirus; Phylogenetic tree; Synonymous substitution; Lineage (genetic); Coding region; Silent mutation; Capsid; Phylogenetics; Sequence analysis; Viral evolution; Nonsynonymous substitution; Codon usage bias; Mutation; Parvovirus; Virus; Genome; Missense mutation","score_opus":0.02895923252510173,"score_gpt":0.3270564312209068,"score_spread":0.29809719869580503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2932144479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975252,0.0015642842,0.00020035848,0.000025519925,0.000034040277,0.00045705924,0.00006791017,0.000010416877,0.000115212635],"genre_scores_gemma":[0.99881285,0.00036154623,0.00014434922,0.00023521972,0.000056119523,0.00004690002,0.0001713389,0.00002368099,0.0001479851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999123,0.00009035821,0.00016739161,0.00027929124,0.00017330144,0.0001667071],"domain_scores_gemma":[0.99942875,0.000007258075,0.00008089276,0.00033162217,0.000096983735,0.000054519296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009980399,0.00012122747,0.00014682446,0.000082777944,0.0000327277,0.000011985443,0.00013038705,0.00009256631,0.00006849866],"category_scores_gemma":[0.000027458718,0.00011439349,0.000051985007,0.00012332373,0.00008055223,0.000008158788,0.0000914209,0.000053502998,0.000022713362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058832666,0.000043138,0.018314583,0.00003174967,0.00007217569,0.0000019444417,0.000012858865,0.00009227831,0.9795337,0.000016182425,0.000023207383,0.0012699079],"study_design_scores_gemma":[0.0003703792,0.00086780544,0.010945796,0.000010031821,0.00001346275,0.0000049791524,0.000010093938,0.00007391279,0.9844277,0.000016098462,0.0031347713,0.00012495443],"about_ca_topic_score_codex":0.00003204433,"about_ca_topic_score_gemma":0.000005801435,"teacher_disagreement_score":0.007368788,"about_ca_system_score_codex":0.000008881149,"about_ca_system_score_gemma":0.00008315366,"threshold_uncertainty_score":0.46648312},"labels":[],"label_agreement":null},{"id":"W2934429271","doi":"10.3390/v11040311","title":"HIV-1 Envelope Glycoprotein at the Interface of Host Restriction and Virus Evasion","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of General Medical Sciences; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Viral envelope; Viral entry; Biology; Evasion (ethics); Virology; Intrinsic immunity; Innate immune system; Glycoprotein; Acquired immune system; Immune system; Viral protein; Host (biology); Virus; Immunity; Viral replication; Cell biology; Immunology; Genetics","score_opus":0.07423583942373674,"score_gpt":0.3676670665141678,"score_spread":0.29343122709043107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2934429271","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016970356,0.9956234,0.000005380504,0.000024184328,0.0002356997,0.0009960361,0.0010020861,0.000020244865,0.00039590956],"genre_scores_gemma":[0.0003924504,0.9931796,0.0000073222886,0.000013088427,0.000017807724,0.00009446499,0.00025080194,0.000023070017,0.006021366],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986325,0.0004247699,0.0003308504,0.00031576946,0.000051129282,0.0002450177],"domain_scores_gemma":[0.99891895,0.00037049182,0.00022612752,0.00043263278,0.000031863776,0.000019931238],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018251444,0.00025545515,0.00072704203,0.00012390183,0.00014786322,0.0000132239775,0.00021832991,0.00032082276,0.00065313355],"category_scores_gemma":[0.00008679365,0.0001375811,0.00014419001,0.00013307818,0.0002356494,0.00004666828,0.0003201662,0.0003270736,0.008443379],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019951042,0.00012812426,0.00011171835,0.0032494955,0.00081728667,0.000007871656,0.000082994884,1.267425e-7,0.01261481,0.000052861506,0.012187375,0.97054785],"study_design_scores_gemma":[0.00034267982,0.00023668077,0.00006400943,0.0017641308,0.00024810235,0.00004489397,0.00001311155,1.352055e-8,0.008930906,0.0000023504242,0.98823315,0.000119975855],"about_ca_topic_score_codex":0.00035290254,"about_ca_topic_score_gemma":0.00004946678,"teacher_disagreement_score":0.9760458,"about_ca_system_score_codex":0.0001013255,"about_ca_system_score_gemma":0.00013952932,"threshold_uncertainty_score":0.99232864},"labels":[],"label_agreement":null},{"id":"W2935101654","doi":"10.3390/v11040326","title":"Mechanism of Inhibition of Ebola Virus RNA-Dependent RNA Polymerase by Remdesivir","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":657,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Gilead Sciences","keywords":"Ebola virus; Virology; RNA; Polymerase; RNA polymerase; Mechanism (biology); RNA-dependent RNA polymerase; Virus; Biology; DNA; Genetics; Gene; Physics","score_opus":0.024851963043397367,"score_gpt":0.307596575026299,"score_spread":0.28274461198290163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2935101654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99453163,0.00051549403,0.0003316312,0.00009687238,0.00012709052,0.0003409343,0.0001162435,0.00006931682,0.0038707727],"genre_scores_gemma":[0.9982762,0.00028943145,0.00006411385,0.00031101148,0.000051440646,0.00001070391,0.000011958871,0.000037352835,0.00094779296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998839,0.000055874778,0.0003189331,0.00019072501,0.0004013639,0.00019407099],"domain_scores_gemma":[0.99932986,0.00005235781,0.00012263586,0.00027921583,0.0001216535,0.00009429053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002106466,0.000115588286,0.00029867797,0.00020427485,0.00003424446,0.000009296115,0.00005627868,0.000099556615,0.0006131317],"category_scores_gemma":[0.00004717691,0.00009647734,0.00010102171,0.00021106687,0.0000594281,0.00013507917,0.000058819638,0.00016340088,0.00022708852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020042234,0.000292171,0.0003861024,0.00010488943,0.00004929335,0.000007954011,0.00005476005,0.0000014519878,0.99312913,0.0014201859,0.0012628908,0.0030907295],"study_design_scores_gemma":[0.0011128586,0.0006957456,0.00036610232,0.00012503433,0.000030128327,0.000011632771,0.000097707416,0.000047226516,0.9959856,0.00019748698,0.0012442957,0.00008613573],"about_ca_topic_score_codex":0.0022873902,"about_ca_topic_score_gemma":0.000028413302,"teacher_disagreement_score":0.0037445496,"about_ca_system_score_codex":0.000040468127,"about_ca_system_score_gemma":0.0000773208,"threshold_uncertainty_score":0.6713362},"labels":[],"label_agreement":null},{"id":"W2937848787","doi":"10.3390/v11040345","title":"Suppression of RNA-Dependent RNA Polymerase 6 Favors the Accumulation of Potato Spindle Tuber Viroid in Nicotiana Benthamiana","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Nicotiana benthamiana; Potato spindle tuber viroid; Viroid; Biology; Virology; RNA; Polymerase; RNA-dependent RNA polymerase; Plant virus; Virus; Genetics; Gene","score_opus":0.06347078919680625,"score_gpt":0.3110912697652255,"score_spread":0.24762048056841923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2937848787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978088,0.00071460305,3.2442443e-7,0.00033464356,0.00007744711,0.00029113234,0.00032711422,0.000011662734,0.00043428247],"genre_scores_gemma":[0.9993941,0.00029788574,0.000005685471,0.00011563049,0.00003432909,0.0000066901644,0.00001857123,0.0000011135504,0.00012594837],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987289,0.00013258758,0.00028630698,0.00020083446,0.00041480575,0.0002365879],"domain_scores_gemma":[0.9993097,0.00037345308,0.00013382944,0.00010023603,0.00003961932,0.00004314058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025528567,0.000115286464,0.00021473865,0.0000344154,0.000068560345,0.000016624474,0.00031122818,0.000059214435,0.00047030085],"category_scores_gemma":[0.00010267948,0.00003816084,0.00006841374,0.00028752824,0.00008310889,0.00017457837,0.00017655992,0.0001175433,0.000045485325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008022942,0.0000944345,0.035041638,0.000011906948,0.000015472639,0.0000014720013,0.00011719256,0.0000629846,0.95727867,0.00003939682,0.00029836805,0.0069582583],"study_design_scores_gemma":[0.0001784885,0.00013006847,0.31256285,0.000058559064,0.0000053128388,6.6222464e-7,0.00043406474,0.000099278426,0.68561476,0.000056233865,0.000775247,0.00008447183],"about_ca_topic_score_codex":0.0064033386,"about_ca_topic_score_gemma":0.0028229775,"teacher_disagreement_score":0.27752122,"about_ca_system_score_codex":0.000020351767,"about_ca_system_score_gemma":0.000011085477,"threshold_uncertainty_score":0.9679975},"labels":[],"label_agreement":null},{"id":"W2939452509","doi":"10.3390/v11040358","title":"Distribution and Phylogeny of Erythrocytic Necrosis Virus (ENV) in Salmon Suggests Marine Origin","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; Fisheries and Oceans Canada; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Herring; Chinook wind; Clupeidae; Virus; Pacific herring; Zoology; Phylogenetics; Fish migration; Fishery; Virology; Gene; Oncorhynchus; Fish <Actinopterygii>; Genetics","score_opus":0.011213127553675725,"score_gpt":0.2397562774236049,"score_spread":0.22854314986992916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939452509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99703634,0.0016671325,0.0000086063155,0.000025129411,0.00020118826,0.00026463062,0.00020236675,0.00002981836,0.00056477875],"genre_scores_gemma":[0.99801373,0.00035008215,0.000013620247,0.00013676014,0.00000937684,0.00000806491,0.00043028453,0.0000097977645,0.0010282933],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992488,0.000056530294,0.00021339467,0.00024047887,0.000022048445,0.00021872735],"domain_scores_gemma":[0.9996463,0.000042261894,0.00008754889,0.00018639356,0.000023046165,0.000014436312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008890291,0.00014499837,0.00024499118,0.000074029085,0.00003436121,0.000010013261,0.000109714645,0.00012797516,0.000637477],"category_scores_gemma":[0.000020574958,0.00012558216,0.00004588155,0.00014946864,0.00011222351,0.00009381346,0.00015023079,0.00010618928,0.00039176052],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020004332,0.00013106872,0.08980203,0.00006307022,0.000066865745,0.0000027649974,0.000086524975,0.000002357253,0.90375483,0.0011884179,0.002700448,0.0020015675],"study_design_scores_gemma":[0.0026748478,0.0001822117,0.5012373,0.000087213455,0.000096054,0.000008251296,0.00015292864,0.0000030554904,0.37604964,0.00022695593,0.118966416,0.00031514294],"about_ca_topic_score_codex":0.00084025617,"about_ca_topic_score_gemma":0.00022340221,"teacher_disagreement_score":0.5277052,"about_ca_system_score_codex":0.000034733694,"about_ca_system_score_gemma":0.000017817285,"threshold_uncertainty_score":0.69799256},"labels":[],"label_agreement":null},{"id":"W2944079221","doi":"10.3390/v11050434","title":"Treatment of Metastatic Disease through Natural Killer Cell Modulation by Infected Cell Vaccines","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"Faculty of Medicine and Health, University of Sydney; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Université de Sherbrooke","keywords":"Oncolytic virus; Immune system; Immunotherapy; Context (archaeology); Immunology; Cancer immunotherapy; Antigen; Immunity; Cancer; Biology; Cancer research; Medicine; Virology","score_opus":0.055925815561740505,"score_gpt":0.3673752800253157,"score_spread":0.31144946446357524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944079221","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014437447,0.9836619,0.000019372097,0.000006462361,0.0002506761,0.0011114555,0.0004035505,0.000015456664,0.000093694114],"genre_scores_gemma":[0.0072596576,0.9878659,0.000077902,0.000045948895,0.00011986075,0.00013257885,0.0023273504,0.00009529102,0.0020755052],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981654,0.00030427705,0.00045204817,0.0005457509,0.00022803736,0.00030446923],"domain_scores_gemma":[0.9986767,0.00006408612,0.00032318945,0.00075866084,0.00008252354,0.000094843796],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000055675344,0.0004855904,0.00091010996,0.0000921973,0.000044599383,0.000023938956,0.0002553823,0.00014316272,0.00009537723],"category_scores_gemma":[0.000023271099,0.0003542986,0.00041427047,0.00019167372,0.000045039957,0.0000085614565,0.00007475404,0.00009647171,0.00009257113],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033808646,0.004509446,0.00030025115,0.038290963,0.0030583262,0.00003907271,0.00012276648,0.00028991213,0.24978627,0.000012591778,0.01794437,0.68226516],"study_design_scores_gemma":[0.0009064296,0.0021304109,0.000006266202,0.00024054878,0.00066647737,0.0000017856264,0.0000030010979,0.000017006225,0.04696235,0.00000836579,0.94865555,0.0004017971],"about_ca_topic_score_codex":0.000048230446,"about_ca_topic_score_gemma":0.000012707933,"teacher_disagreement_score":0.9307112,"about_ca_system_score_codex":0.00005842724,"about_ca_system_score_gemma":0.00035680083,"threshold_uncertainty_score":0.9998909},"labels":[],"label_agreement":null},{"id":"W2945671179","doi":"10.3390/v11050454","title":"Still Something to Discover: Novel Insights into Escherichia coli Phage Diversity and Taxonomy","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ministerio de Ciencia e Innovación; Biotechnology and Biological Sciences Research Council; Deutsche Forschungsgemeinschaft; Deutsche Bundesstiftung Umwelt","keywords":"Escherichia coli; Biology; Genome; Taxonomy (biology); Escherichia; Microbiology; Phylogenetics; Genetics; Computational biology; Gene; Zoology","score_opus":0.028059910975916615,"score_gpt":0.24009313557524928,"score_spread":0.21203322459933266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945671179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99642175,0.000024738301,0.0008779773,0.000056176865,0.00025208134,0.00024221334,0.00001140376,0.000025063324,0.002088565],"genre_scores_gemma":[0.99490434,0.000016146938,0.0023594815,0.0018730536,0.000025632853,0.000007389114,0.0000013133426,0.000007699733,0.0008049706],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994389,0.000013571966,0.00008858875,0.00024361808,0.00007661863,0.00013874074],"domain_scores_gemma":[0.99968284,0.00003427772,0.000039084236,0.00014611738,0.0000036937968,0.000093977724],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00004184337,0.000100323115,0.00010477371,0.000029078949,0.00021980744,0.000053602253,0.00013729105,0.000036719994,0.0011506887],"category_scores_gemma":[0.000012296175,0.000089593224,0.000026794813,0.00011547491,0.00005530019,0.0006688386,0.001221667,0.000094091374,0.0009742896],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016163889,0.000055854056,0.016121987,0.0000049062673,0.000009903574,0.000001300279,0.0020195947,0.000055244593,0.9803168,0.00007173649,0.00036552298,0.0009609821],"study_design_scores_gemma":[0.0003895393,0.00010223924,0.28878364,0.000024823796,0.000020406113,0.0000020682646,0.00034803833,0.00007693325,0.06489451,0.000053926648,0.6450146,0.0002892997],"about_ca_topic_score_codex":0.0060379915,"about_ca_topic_score_gemma":0.00085183146,"teacher_disagreement_score":0.9154223,"about_ca_system_score_codex":0.00008510595,"about_ca_system_score_gemma":0.0000045782494,"threshold_uncertainty_score":0.99980354},"labels":[],"label_agreement":null},{"id":"W2945700468","doi":"10.3390/v11050470","title":"“French Phage Network” Annual Conference 2018—Fourth Meeting Report","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"École Supérieure de Physique et de Chimie Industrielles de la Ville de Paris; Institut National de Recherche en Sciences et Technologies pour l'Environnement et l'Agriculture; Agence Nationale de la Recherche","keywords":"Presentation (obstetrics); Session (web analytics); Library science; Agora; Carr; Bacteriophage; Medicine; Biology; Ecology; World Wide Web; Computer science; Genetics","score_opus":0.01639951773758132,"score_gpt":0.2510006206645581,"score_spread":0.23460110292697675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945700468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94355816,0.00003464171,0.00020247973,0.00009398719,0.0008678737,0.0001495828,0.000024251449,0.00006995507,0.054999072],"genre_scores_gemma":[0.9852912,0.000025578345,0.0011814452,0.00069672544,0.00015831967,0.0000066672173,0.000010236689,0.000014763848,0.012615057],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990258,0.00003172979,0.00022176003,0.00030219887,0.00012318729,0.0002953269],"domain_scores_gemma":[0.99945277,0.000037612044,0.00012976673,0.00029436802,0.000011971537,0.00007353213],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00015570661,0.00012490088,0.00013481182,0.000014782665,0.00010864419,0.000065258784,0.00018213953,0.00005463085,0.018597929],"category_scores_gemma":[0.000024701374,0.000112801565,0.000051768056,0.00011584966,0.00007030498,0.00048533018,0.00020256836,0.0001333436,0.005630162],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018419487,0.00011637116,0.111107826,0.000009730751,0.000034158715,0.00013163258,0.00073478225,0.0011501986,0.7466603,0.000052989577,0.13263448,0.007349135],"study_design_scores_gemma":[0.00023290458,0.000084701904,0.1838114,0.000058283054,0.000020207797,0.00020042802,0.00013389709,0.00021506341,0.010572447,0.00007695059,0.8042547,0.00033902758],"about_ca_topic_score_codex":0.0028408794,"about_ca_topic_score_gemma":0.00046544056,"teacher_disagreement_score":0.73608786,"about_ca_system_score_codex":0.000052377036,"about_ca_system_score_gemma":0.000012389987,"threshold_uncertainty_score":0.99514407},"labels":[],"label_agreement":null},{"id":"W2945706906","doi":"10.3390/v11050461","title":"Equine Parvovirus-Hepatitis Frequently Detectable in Commercial Equine Serum Pools","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institutes of Health","keywords":"Virology; Parvovirus; Biology; Virus; Transmission (telecommunications); Antibody; Hepatitis; Immunology","score_opus":0.02996237841406095,"score_gpt":0.24517492046059836,"score_spread":0.2152125420465374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945706906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99036735,0.00039380332,0.0000015949716,0.0003605204,0.0002790564,0.00030140433,0.00014473764,0.0001306846,0.008020844],"genre_scores_gemma":[0.99777734,0.0002602108,0.000048019854,0.0011762094,0.00024092592,0.000039915245,0.000011353858,0.0000025365732,0.00044348257],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863076,0.000082915634,0.00029455358,0.00033223841,0.00020155041,0.00045799557],"domain_scores_gemma":[0.9994935,0.00021737712,0.000086678934,0.000086902604,0.000049161987,0.000066386885],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018626021,0.0002005566,0.00029668614,0.000033664768,0.00019139313,0.000065360764,0.00024323651,0.000103847866,0.003639424],"category_scores_gemma":[0.00008289013,0.00008841942,0.000082831015,0.0005279252,0.00007351719,0.00031559166,0.00020812477,0.00017842904,0.0017475326],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037079823,0.000085477266,0.7043099,0.0000058552832,0.000014920936,0.000004973004,0.000030117058,0.000007787375,0.2779992,0.00040391216,0.0009536452,0.016147185],"study_design_scores_gemma":[0.00031192225,0.001025627,0.90497404,0.000041705865,0.000011653517,0.0000042971665,0.00011370329,0.000021812371,0.017695569,0.00045317275,0.07501542,0.0003310668],"about_ca_topic_score_codex":0.009858814,"about_ca_topic_score_gemma":0.03786915,"teacher_disagreement_score":0.26030362,"about_ca_system_score_codex":0.00008026489,"about_ca_system_score_gemma":0.00000942036,"threshold_uncertainty_score":0.9990297},"labels":[],"label_agreement":null},{"id":"W2947336163","doi":"10.3390/v11060487","title":"Quantifying Anti-HIV Envelope-Specific Antibodies in Plasma from HIV Infected Individuals","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; Centre Hospitalier de l’Université de Montréal; McGill University; Université de Montréal; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Antibody; Epitope; Flow cytometry; Virology; Biology; Viral envelope; Antigen; Molecular biology; Immunology","score_opus":0.05669248805100652,"score_gpt":0.2989536140005634,"score_spread":0.2422611259495569,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947336163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937665,0.0033768942,0.0000062603312,0.00009897587,0.00031700445,0.0003253799,0.00076432235,0.00009633842,0.0012483639],"genre_scores_gemma":[0.99725115,0.0009955057,0.00014350693,0.00008066263,0.000021902531,0.00002031744,0.0008069735,0.000021381895,0.00065859593],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99849075,0.00023198694,0.0002929687,0.00040281244,0.00006483868,0.000516652],"domain_scores_gemma":[0.9990869,0.00044670134,0.000074438176,0.00032970752,0.000031324853,0.00003093729],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00014729153,0.00021667205,0.0003873122,0.00028219985,0.000113242946,0.000046438217,0.00022914917,0.00020099564,0.0035172468],"category_scores_gemma":[0.000066103836,0.00017808915,0.00006170133,0.00021587158,0.000110772125,0.00019205398,0.00014845992,0.0003066201,0.041630324],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058159014,0.00016347459,0.7701845,0.0000076000165,0.00015657044,0.000023120512,0.00041463578,0.000004536267,0.22437753,0.00016112198,0.0034995694,0.0009491554],"study_design_scores_gemma":[0.0020390567,0.000060543818,0.73015946,0.00006796606,0.000008692783,0.0000052041673,0.00018661762,6.511119e-7,0.14466166,0.000021813234,0.12261179,0.00017655842],"about_ca_topic_score_codex":0.00042074616,"about_ca_topic_score_gemma":0.00016145156,"teacher_disagreement_score":0.11911222,"about_ca_system_score_codex":0.00004556133,"about_ca_system_score_gemma":0.00007536322,"threshold_uncertainty_score":0.99739367},"labels":[],"label_agreement":null},{"id":"W2948604111","doi":"10.3390/v11060514","title":"Mast Cells and Natural Killer Cells—A Potentially Critical Interaction","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Innate immune system; Immunology; Immune system; Effector; Lymphokine-activated killer cell; Cell biology; Mast cell; Priming (agriculture); Natural killer cell; Innate lymphoid cell; Interleukin 21; Cytotoxic T cell; T cell; In vitro","score_opus":0.0424862373967843,"score_gpt":0.3229995544590287,"score_spread":0.2805133170622444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948604111","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000017297147,0.93096894,0.00005322462,0.000015870884,0.06752477,0.00032085954,0.000013953882,0.00008475153,0.0010003375],"genre_scores_gemma":[0.00015919097,0.9604095,0.000023956945,0.00035575771,0.00014809081,0.00002269919,0.00020230617,0.000053456326,0.038625024],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983144,0.00031830595,0.00052420766,0.00048250344,0.0000413189,0.00031930985],"domain_scores_gemma":[0.99899524,0.00037457704,0.0002228145,0.00030907843,0.00007483859,0.00002341777],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000108518005,0.00041748365,0.0009255262,0.00025973137,0.0001533319,0.00008310465,0.00016568898,0.0005944807,0.0036893631],"category_scores_gemma":[0.000050055838,0.00033178506,0.00033625908,0.00009311717,0.00014048241,0.00029954166,0.00013586834,0.0010224463,0.012906184],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014269564,0.00018073198,9.162703e-7,0.005103965,0.00062493637,0.000009801751,0.00009169017,4.2480215e-7,0.03769755,0.00027557998,0.12519677,0.83067495],"study_design_scores_gemma":[0.0002167682,0.00009377431,0.0000014496865,0.0018208094,0.0005573216,0.00018123939,0.00008298194,9.035747e-7,0.0033214162,0.0000016640673,0.9933815,0.00034015614],"about_ca_topic_score_codex":0.000061401806,"about_ca_topic_score_gemma":0.000003177333,"teacher_disagreement_score":0.86818475,"about_ca_system_score_codex":0.00007470378,"about_ca_system_score_gemma":0.000069074624,"threshold_uncertainty_score":0.9999134},"labels":[],"label_agreement":null},{"id":"W2949452255","doi":"10.3390/v11070667","title":"A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Danish Agency for Science and Higher Education; Canadian Institutes of Health Research; Institut National de la Recherche Agronomique","keywords":"Metagenomics; Human virome; Biology; Microbiome; Computational biology; Genome; Isolation (microbiology); DNA extraction; DNA sequencing; Genetics; DNA; Microbiology; Polymerase chain reaction; Gene","score_opus":0.051997826319410384,"score_gpt":0.3290053930787058,"score_spread":0.2770075667592954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949452255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94680995,0.0000022938536,0.007866054,0.000014432074,0.00015376539,0.044423517,0.000457113,0.000025433745,0.00024745593],"genre_scores_gemma":[0.8786403,0.0000023970854,0.022399083,0.00026495015,0.00014094968,0.09697344,0.000047535555,0.00005285143,0.0014784798],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993202,0.000020191643,0.00020142298,0.00022922394,0.000054933305,0.00017400076],"domain_scores_gemma":[0.9994257,0.00021796273,0.0001573378,0.00014993083,0.000016328926,0.000032757525],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010490111,0.00010774271,0.00017476825,0.000026647462,0.00007919092,0.00003622445,0.000094850686,0.00006395998,0.0023720898],"category_scores_gemma":[0.000051274947,0.00009789624,0.00010595411,0.000054749074,0.000044170796,0.0005167622,0.000052910244,0.00005798628,0.00015438041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012134995,0.00007172661,0.005362732,0.00003340704,0.000029889829,1.00467986e-7,0.00015866855,0.00036570296,0.99188095,0.00002583082,0.0006466532,0.0013029572],"study_design_scores_gemma":[0.0009124236,0.00030132537,0.05341055,0.000044121003,0.000040117706,0.000002292873,0.00017905177,0.00083993026,0.7605207,0.0003847553,0.18316849,0.00019625864],"about_ca_topic_score_codex":0.0039339475,"about_ca_topic_score_gemma":0.00053017744,"teacher_disagreement_score":0.23136029,"about_ca_system_score_codex":0.00020224728,"about_ca_system_score_gemma":0.000022407628,"threshold_uncertainty_score":0.99853987},"labels":[],"label_agreement":null},{"id":"W2949961623","doi":"10.3390/v11060556","title":"Modelling Ranavirus Transmission in Populations of Common Frogs (Rana temporaria) in the United Kingdom","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Natural Environment Research Council; Sight Research UK; Queen Mary University of London","keywords":"Ranavirus; Amphibian; Context (archaeology); Transmission (telecommunications); Biology; Rana; Disease; Population; Zoology; Ecology; Evolutionary biology; Virology; Demography; Medicine; Pathology; Anatomy","score_opus":0.18782670855540098,"score_gpt":0.3680107725956398,"score_spread":0.18018406404023882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949961623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973061,0.00012724573,0.001261479,0.00020188374,0.00006556504,0.00034230293,0.0000051682136,0.000019337354,0.0006709259],"genre_scores_gemma":[0.9993552,0.000025752131,0.0002564194,0.00028376575,0.000018273426,0.000006650927,0.000025030475,0.000010827718,0.000018071165],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9992736,0.000087389686,0.00028872327,0.0001088425,0.00013209994,0.00010932768],"domain_scores_gemma":[0.9996285,0.000073803545,0.000052800697,0.00020025803,0.000019783254,0.000024895811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002335865,0.0000809925,0.00020589166,0.00036613023,0.000033470762,0.000007807015,0.00006290898,0.00006939434,0.00007540316],"category_scores_gemma":[0.000010724964,0.00005492534,0.000053607284,0.0007237553,0.000023018745,0.00009011771,0.0000066487837,0.0001924002,0.000011201923],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002521451,0.0005959097,0.8597106,0.00007852494,0.00002129511,0.000011383921,0.0013249638,0.12004722,0.01263552,0.004289402,0.000099236335,0.000933811],"study_design_scores_gemma":[0.009380568,0.0008894001,0.34547934,0.0016509683,0.00020189316,0.00002378991,0.0011919234,0.5995075,0.008415304,0.0032495654,0.029486008,0.00052373816],"about_ca_topic_score_codex":0.03114337,"about_ca_topic_score_gemma":0.00043276098,"teacher_disagreement_score":0.51423126,"about_ca_system_score_codex":0.000024737636,"about_ca_system_score_gemma":0.000024500992,"threshold_uncertainty_score":0.97530836},"labels":[],"label_agreement":null},{"id":"W2950679243","doi":"10.3390/v11040363","title":"Identification of a Novel Gammaherpesvirus in Canada lynx (Lynx canadensis)","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Science Centre for Human and Animal Health; Government of Newfoundland and Labrador; Memorial University of Newfoundland; Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Identification (biology); Biology; Rodent; Evolutionary biology; Zoology; Ecology; Geography","score_opus":0.021236741883379973,"score_gpt":0.27076964759319766,"score_spread":0.24953290570981768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950679243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971295,0.00017588315,0.000018474499,0.00009794377,0.00029253587,0.00032496714,0.000066831075,0.00001520543,0.0018786874],"genre_scores_gemma":[0.99880517,0.00003685909,0.000063539796,0.00043753377,0.000024886307,0.000019688701,0.000008434184,0.00001736651,0.0005865302],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900454,0.000016133536,0.00036235913,0.00020204816,0.00022427,0.00019062331],"domain_scores_gemma":[0.9993714,0.0000420413,0.00010979449,0.0003264147,0.00006860126,0.000081718485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008567803,0.00011300158,0.000253292,0.00014226684,0.000022556307,0.0000067483093,0.00005525028,0.00005041698,0.0003132889],"category_scores_gemma":[0.00004718765,0.00010221993,0.000039671253,0.00030265804,0.00002052737,0.00007915255,0.000016554493,0.00009466999,0.00008301873],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011983413,0.00054947834,0.89776254,0.00011281864,0.00018037805,0.000053784544,0.00012812096,0.00018518225,0.07788111,0.0004306472,0.0007926639,0.021803413],"study_design_scores_gemma":[0.004170856,0.00011817019,0.74973464,0.00019847817,0.00012648356,0.000042580705,0.00031761834,0.00081990234,0.14754863,0.000023510804,0.09662492,0.00027421702],"about_ca_topic_score_codex":0.9695091,"about_ca_topic_score_gemma":0.9532182,"teacher_disagreement_score":0.14802793,"about_ca_system_score_codex":0.0005637873,"about_ca_system_score_gemma":0.0012507319,"threshold_uncertainty_score":0.41684076},"labels":[],"label_agreement":null},{"id":"W2951932021","doi":"10.3390/v11050396","title":"Evaluating the Within-Host Dynamics of Ranavirus Infection with Mechanistic Disease Models and Experimental Data","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; American Association of Zoo Veterinarians; Canada Excellence Research Chairs, Government of Canada; Association of Zoos and Aquariums; National Science Foundation","keywords":"Ranavirus; Viral replication; Host (biology); Biology; Replication (statistics); Immune system; Viral pathogenesis; Virology; Dynamics (music); Computational biology; Virus; Immunology; Genetics; Physics","score_opus":0.14094300935830034,"score_gpt":0.40213404439274647,"score_spread":0.26119103503444613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951932021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978154,0.00030298307,0.0010681004,0.00004130636,0.00010545484,0.00048776763,0.000050174425,0.000030490806,0.00009836955],"genre_scores_gemma":[0.9994462,0.000023604904,0.00022970028,0.00016485236,0.000027330812,0.0000150316855,0.000025985388,0.000015857042,0.00005139802],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99936396,0.000046057314,0.00014389298,0.0001870543,0.00017622251,0.00008281781],"domain_scores_gemma":[0.9993188,0.000052018513,0.00008367129,0.00044861808,0.000040872645,0.00005601522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002215132,0.00009301746,0.000156061,0.000045514225,0.00007076429,0.00001937806,0.00005625351,0.000023338856,0.000046011617],"category_scores_gemma":[0.00005241882,0.000053774776,0.000018551138,0.00011232943,0.00006472186,0.00021911878,0.000080621096,0.00008366221,0.0000064608],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009122356,0.0022940175,0.3441859,0.005166737,0.0013220293,0.00003434428,0.0028254662,0.023155712,0.53300136,0.07694069,0.00010396899,0.0018474512],"study_design_scores_gemma":[0.0018919386,0.0021126769,0.0075153834,0.00077195995,0.0006031418,0.000034953533,0.0004279536,0.97763336,0.008397286,0.00039674126,0.000021098866,0.00019351803],"about_ca_topic_score_codex":0.00061885564,"about_ca_topic_score_gemma":0.00012480491,"teacher_disagreement_score":0.9544776,"about_ca_system_score_codex":0.000032233096,"about_ca_system_score_gemma":0.000055812685,"threshold_uncertainty_score":0.21928719},"labels":[],"label_agreement":null},{"id":"W2960160261","doi":"10.3390/v11070635","title":"Immune Responses in the Eye-Associated Lymphoid Tissues of Chickens after Ocular Inoculation with Vaccine and Virulent Strains of the Respiratory Infectious Laryngotracheitis Virus (ILTV)","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"U.S. Department of Agriculture","keywords":"Biology; Immune system; Conjunctiva; Virology; Immunology; Virus; Viral replication; Interferon; Microbiology","score_opus":0.012538984252656375,"score_gpt":0.27001635018318526,"score_spread":0.2574773659305289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2960160261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705535,0.001618826,0.000002519249,0.000084022766,0.00005391535,0.0006980603,0.00007107523,0.000022288783,0.00039394628],"genre_scores_gemma":[0.99926883,0.0001889528,0.000022736356,0.00036184234,0.000017973874,0.000047057973,0.000005926488,0.000022141518,0.00006453314],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987041,0.00028742326,0.00036964542,0.00019488805,0.0002776412,0.00016630901],"domain_scores_gemma":[0.9990066,0.000121893776,0.000205642,0.00054765266,0.0000871915,0.000030982526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003774453,0.00017050811,0.00034260165,0.00016205583,0.00006555844,0.000013993952,0.00009290393,0.00010814905,0.00008781473],"category_scores_gemma":[0.00014511264,0.00009474323,0.00007777877,0.00042678893,0.000095836964,0.00011920798,0.000052546347,0.00015058598,0.000008351342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042482774,0.0005610947,0.96760064,0.000050281193,0.00021464034,0.00002044267,0.00076104526,0.000017408662,0.028675603,0.000061981445,0.000008953352,0.001603074],"study_design_scores_gemma":[0.0027315435,0.0006532751,0.9557317,0.00026055894,0.00016089731,0.00002432974,0.00011023504,0.000012025894,0.037817873,0.00003566494,0.0023684571,0.000093441166],"about_ca_topic_score_codex":0.0020090365,"about_ca_topic_score_gemma":0.0014070749,"teacher_disagreement_score":0.011868948,"about_ca_system_score_codex":0.000073403426,"about_ca_system_score_gemma":0.00009538809,"threshold_uncertainty_score":0.38635167},"labels":[],"label_agreement":null},{"id":"W2962120366","doi":"10.3390/v11070645","title":"Vesicular Stomatitis Virus-Based Vaccines Provide Cross-Protection against Andes and Sin Nombre Viruses","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Public Health Agency; Public Health Agency of Canada","keywords":"Virology; Vesicular stomatitis virus; Biology; Virus; Vesicular Stomatitis; Hantavirus; Attenuated vaccine; Genetics; Virulence","score_opus":0.028910523126042056,"score_gpt":0.3025520170659681,"score_spread":0.2736414939399261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962120366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966743,0.0006785324,0.00023231578,0.00013331574,0.00031388528,0.000795716,0.000033514894,0.0002912833,0.0008471188],"genre_scores_gemma":[0.9966172,0.00011138936,0.00025374533,0.0024758915,0.00019782234,0.000065237626,0.000012184539,0.000046422658,0.00022012118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880934,0.00005294128,0.00029504605,0.00038694649,0.00019652673,0.00025922956],"domain_scores_gemma":[0.99924916,0.0000565292,0.00011434081,0.00034449392,0.00011077297,0.00012468001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014318964,0.00024561468,0.00033991944,0.00023042203,0.00019428044,0.00013718149,0.000057980793,0.00014276487,0.00032958988],"category_scores_gemma":[0.000119577366,0.00020024835,0.00010151026,0.00029321038,0.000083890045,0.00040770957,0.000035644385,0.00018589453,0.00022421958],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031784762,0.00025959229,0.34174472,0.00034482908,0.00010130312,0.000025459936,0.00006212589,0.00017746227,0.6465738,0.00009255641,0.0007723878,0.009527947],"study_design_scores_gemma":[0.0037782178,0.0015855078,0.42193657,0.00043146516,0.00013395783,0.000054494278,0.00007111468,0.0019710904,0.5014795,0.000080831174,0.067932,0.00054520724],"about_ca_topic_score_codex":0.0009299432,"about_ca_topic_score_gemma":0.00022581645,"teacher_disagreement_score":0.14509422,"about_ca_system_score_codex":0.00006709534,"about_ca_system_score_gemma":0.00009073692,"threshold_uncertainty_score":0.81658906},"labels":[],"label_agreement":null},{"id":"W2962823898","doi":"10.3390/v11080687","title":"Caucasian Ethnicity, but Not Treatment Cessation Is Associated with HBsAg Loss Following Nucleos(t)ide Analogue-Induced HBeAg Seroconversion","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"Fondation contre le Cancer","keywords":"HBsAg; Medicine; HBeAg; Seroconversion; Internal medicine; Hazard ratio; Gastroenterology; Cohort; Hepatitis B virus; Hepatitis B; Immunology; Virus","score_opus":0.05458224674687404,"score_gpt":0.3081947769199672,"score_spread":0.25361253017309315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962823898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99552405,0.00008243892,0.000010750619,0.001113204,0.0002915062,0.00078807113,0.00007692478,0.00020449045,0.0019085428],"genre_scores_gemma":[0.9951783,0.00012470802,0.0000876276,0.0032790864,0.00008639226,0.00003464423,0.000060865867,0.000062179315,0.001086191],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980308,0.00010627461,0.00034081025,0.0004967802,0.0005684601,0.00045690758],"domain_scores_gemma":[0.9988996,0.00018073784,0.00019686208,0.00041856308,0.00014030961,0.00016393633],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019233096,0.00034195985,0.00065311755,0.00018542887,0.00021232934,0.000039198414,0.000102404425,0.00019062548,0.0002389779],"category_scores_gemma":[0.00015368669,0.00026337898,0.00018061322,0.00036095895,0.000050905463,0.0002889584,0.00006930596,0.00018018145,0.00059058063],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029592504,0.0003301123,0.9351407,0.000044840795,0.0011050197,0.00041144734,0.0026736818,0.0000055441324,0.057631526,0.000020558295,0.0006766862,0.0016639207],"study_design_scores_gemma":[0.006923779,0.0023521502,0.79718643,0.0006785626,0.00079687644,0.000025935866,0.0008344318,0.0001824367,0.18689425,0.00001821807,0.0035572536,0.0005496777],"about_ca_topic_score_codex":0.013397378,"about_ca_topic_score_gemma":0.0068266424,"teacher_disagreement_score":0.13795431,"about_ca_system_score_codex":0.00072377844,"about_ca_system_score_gemma":0.00017391084,"threshold_uncertainty_score":0.9999818},"labels":[],"label_agreement":null},{"id":"W2964269898","doi":"10.3390/v11070662","title":"Feline Foamy Virus Infection: Characterization of Experimental Infection and Prevalence of Natural Infection in Domestic Cats with and without Chronic Kidney Disease","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institutes of Health; Morris Animal Foundation","keywords":"CATS; Tropism; Peripheral blood mononuclear cell; Kidney; Kidney disease; Histopathology; Tissue tropism; Immunology; Biology; Urinary system; Virus; Medicine; Pathology; Virology; Internal medicine; In vitro","score_opus":0.010216387643352105,"score_gpt":0.2824461827086379,"score_spread":0.27222979506528583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964269898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973916,0.0019334127,0.00002043586,0.00001030007,0.00012944295,0.0004154265,0.000066764595,0.00001822438,0.000014436672],"genre_scores_gemma":[0.9977484,0.0019902699,0.0000045381203,0.00001637787,0.000013190946,0.00004122229,0.0000977111,0.000007870869,0.00008042205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99937737,0.000112725014,0.00015595267,0.00018673815,0.000038801045,0.00012842247],"domain_scores_gemma":[0.99969643,0.000028799443,0.00009710936,0.00010647568,0.00003497408,0.000036178288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000071744165,0.000109142864,0.00016328355,0.00014632112,0.00004722636,0.000007045043,0.000019077223,0.000057160425,0.000109145876],"category_scores_gemma":[0.000039241884,0.00008553293,0.000016634607,0.00011736667,0.00012805134,0.00023243096,0.000033770517,0.000110356144,0.00001983207],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033863436,0.0001291694,0.5218335,0.0001586161,0.000031711283,6.562749e-7,0.00006745347,0.0000023815194,0.47699216,0.000008894394,0.000002027563,0.0004348429],"study_design_scores_gemma":[0.0016499215,0.00065046747,0.73157305,0.0001512293,0.000025823629,0.000019253988,0.000002028057,0.000015078844,0.26568058,0.000002334495,0.00016733182,0.000062925035],"about_ca_topic_score_codex":0.0016962102,"about_ca_topic_score_gemma":0.0002007413,"teacher_disagreement_score":0.21131156,"about_ca_system_score_codex":0.000056660185,"about_ca_system_score_gemma":0.000090359776,"threshold_uncertainty_score":0.34879315},"labels":[],"label_agreement":null},{"id":"W2965360666","doi":"10.3390/v11080688","title":"Probing Morbillivirus Antisera Neutralization Using Functional Chimerism between Measles Virus and Canine Distemper Virus Envelope Glycoproteins","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Dalhousie University; Mayo Clinic","keywords":"Canine distemper; Measles virus; Virology; Morbillivirus; Biology; Virus; Neutralization; Neutralizing antibody; Glycoprotein; Antiserum; Mononegavirales; Paramyxoviridae; Antibody; Measles; Molecular biology; Vaccination; Viral disease; Immunology","score_opus":0.054920683597133556,"score_gpt":0.29113402297483704,"score_spread":0.23621333937770347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965360666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965724,0.0013822919,0.00037089922,0.00013076315,0.00024924116,0.0007615747,0.00014638391,0.00014482532,0.00024162755],"genre_scores_gemma":[0.9974391,0.00021032924,0.00028905668,0.00123347,0.00037438108,0.000027757775,0.0001172621,0.000056412446,0.00025222902],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983835,0.00009379794,0.0003733433,0.0004990644,0.0002888284,0.00036142423],"domain_scores_gemma":[0.99922526,0.00005683222,0.00014508206,0.00029293384,0.00007390676,0.0002059827],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001362338,0.0003053348,0.00047158505,0.00017779214,0.0002487016,0.000049346458,0.00008040062,0.00019384317,0.0006311882],"category_scores_gemma":[0.000058082314,0.0002613011,0.000090505826,0.00023715179,0.0001673292,0.0004300969,0.000082959385,0.00022250116,0.00016376561],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000389828,0.00012922152,0.46559438,0.00014975293,0.00018084902,0.000022570326,0.0001336475,0.0001034239,0.5317607,0.00025928183,0.00014314825,0.0011332232],"study_design_scores_gemma":[0.001809629,0.0003746162,0.89722824,0.00023300627,0.00040884063,0.000060262755,0.000057338246,0.00033038834,0.0956096,0.000121353485,0.003358043,0.00040866423],"about_ca_topic_score_codex":0.0012051467,"about_ca_topic_score_gemma":0.000081616905,"teacher_disagreement_score":0.4361511,"about_ca_system_score_codex":0.00006113515,"about_ca_system_score_gemma":0.00014486321,"threshold_uncertainty_score":0.9999839},"labels":[],"label_agreement":null},{"id":"W2965644369","doi":"10.3390/v11080712","title":"Aerosol Detection and Transmission of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV): What Is the Evidence, and What Are the Knowledge Gaps?","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Airborne transmission; Transmission (telecommunications); Outbreak; Biology; Porcine reproductive and respiratory syndrome virus; Pathogen; Virology; Infectious disease (medical specialty); Pandemic; Population; Virus; Environmental health; Disease; Coronavirus disease 2019 (COVID-19); Immunology; Medicine; Telecommunications","score_opus":0.1342680511939948,"score_gpt":0.3298071417427789,"score_spread":0.19553909054878413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965644369","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.070487976,0.92806447,4.1183537e-7,0.00022527984,0.00020016922,0.0009528577,0.000024119541,0.0000272,0.00001750846],"genre_scores_gemma":[0.013485657,0.9859949,0.000002066897,0.0001779437,0.0001711787,0.0000839984,0.0000010439092,0.000004399508,0.00007881098],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99814427,0.0004078037,0.00040880544,0.0006696162,0.00017279405,0.00019670356],"domain_scores_gemma":[0.99807465,0.0011613776,0.00041289246,0.000190624,0.00010827083,0.000052194417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006386693,0.00035847398,0.0008382274,0.00003577265,0.0005811716,0.00032755831,0.00019714433,0.0002076438,0.000031990523],"category_scores_gemma":[0.00013860945,0.00009949343,0.00014659086,0.0004520107,0.00053462584,0.0010832992,0.00023279282,0.00031118645,0.000014784284],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022300736,0.000030414696,0.00013105318,0.0012955065,0.000086910906,0.0000012782788,0.00026439718,2.4464008e-8,0.0020980344,0.0000074899863,0.000082080114,0.9959805],"study_design_scores_gemma":[0.000065828266,0.000721658,0.0059411693,0.0156141035,0.0006329649,0.00011326924,0.0025944514,6.8307537e-7,0.00081339513,0.0000427129,0.97313446,0.00032529727],"about_ca_topic_score_codex":0.000152189,"about_ca_topic_score_gemma":0.000266019,"teacher_disagreement_score":0.99565524,"about_ca_system_score_codex":0.000027254782,"about_ca_system_score_gemma":0.000016416967,"threshold_uncertainty_score":0.44699606},"labels":[],"label_agreement":null},{"id":"W2967042925","doi":"10.3390/v11080751","title":"Trans-Acting RNA–RNA Interactions in Segmented RNA Viruses","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"RNA; Biology; Genome; Brome mosaic virus; Non-coding RNA; RNA editing; Genetics; Virus; Virology; RNA silencing; RNA virus; RNA-dependent RNA polymerase; Gene; RNA interference","score_opus":0.28099539975771715,"score_gpt":0.4039441254813603,"score_spread":0.12294872572364318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967042925","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021028426,0.9910417,9.221872e-7,0.00008134944,0.00048654847,0.0009693707,0.0019710143,0.00014787559,0.00319836],"genre_scores_gemma":[0.0005107223,0.99795103,0.000019631114,0.00024056749,0.0003820748,0.00017232232,0.00014850953,0.0000067325464,0.0005684127],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970035,0.00041128966,0.0007531011,0.00067414506,0.0004479321,0.00071003614],"domain_scores_gemma":[0.9973861,0.0019506048,0.00033049664,0.00014355326,0.000056944948,0.00013232417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035895017,0.00055453676,0.0014874972,0.000135682,0.00027488728,0.0001805341,0.000711465,0.00019356898,0.0008669082],"category_scores_gemma":[0.00030296677,0.00020903029,0.00047864215,0.00095138553,0.00009678252,0.00039704825,0.00024357486,0.0008451957,0.00066787883],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019303528,0.000119223216,0.000023068993,0.0010618205,0.00016247008,0.00003077756,0.000053600917,7.6194044e-7,0.023693902,0.000008152216,0.0023770474,0.9724499],"study_design_scores_gemma":[0.000085675616,0.00007419936,0.00005454536,0.005075344,0.000112970345,0.000008619489,0.00013854077,0.0000025003108,0.0005666484,0.0000074955456,0.99343157,0.00044188366],"about_ca_topic_score_codex":0.0018609499,"about_ca_topic_score_gemma":0.004063623,"teacher_disagreement_score":0.99105453,"about_ca_system_score_codex":0.000189221,"about_ca_system_score_gemma":0.000060498423,"threshold_uncertainty_score":0.94920367},"labels":[],"label_agreement":null},{"id":"W2969789057","doi":"10.3390/v11090780","title":"Pulmonary Involvement during the Ebola Virus Disease","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Université Laval","funders":"Ministero della Salute; European and Developing Countries Clinical Trials Partnership; European Commission; National Institute for Health and Care Research","keywords":"Ebola virus; Virology; Ebolavirus; Medicine; Disease; Coronavirus disease 2019 (COVID-19); Virus; Infectious disease (medical specialty); Internal medicine","score_opus":0.15426831466279442,"score_gpt":0.41359345075418724,"score_spread":0.25932513609139285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969789057","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000198702,0.99470043,0.000001962336,0.000048052458,0.00029486668,0.0015509218,0.00014777566,0.00007804376,0.0029792238],"genre_scores_gemma":[0.00026285456,0.99111086,0.0000041939597,0.0003335621,0.0006365498,0.0003099912,0.00006917487,0.000075310956,0.007197505],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99825543,0.00014774743,0.00040039126,0.00039653145,0.0004281468,0.00037175155],"domain_scores_gemma":[0.99867946,0.00012108243,0.00012277371,0.00078366033,0.00005586413,0.00023717934],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020213032,0.00033828514,0.000883699,0.00023840941,0.00021989236,0.00007219549,0.00022542846,0.00013855813,0.00067989476],"category_scores_gemma":[0.00006322638,0.00018064906,0.0005772201,0.0003629715,0.00009950377,0.00008451836,0.0002723231,0.0006155355,0.0024158135],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091823895,0.0004117215,0.0002590882,0.055700626,0.00043615676,0.0005057444,0.000016742975,0.0000010316045,0.00019091423,0.00014232738,0.0022128802,0.94003093],"study_design_scores_gemma":[0.00014172263,0.000051134386,0.00033244377,0.005355899,0.000880224,0.000083804465,0.000008950585,0.000005122325,0.000032387266,0.0000067854,0.99290645,0.00019507676],"about_ca_topic_score_codex":0.00025766555,"about_ca_topic_score_gemma":0.000008705812,"teacher_disagreement_score":0.99069357,"about_ca_system_score_codex":0.00020638856,"about_ca_system_score_gemma":0.00045145498,"threshold_uncertainty_score":0.99836093},"labels":[],"label_agreement":null},{"id":"W2969866057","doi":"10.3390/v11090768","title":"Discovery and Characterization of Novel RNA Viruses in Aquatic North American Wild Birds","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Guelph; Memorial University of Newfoundland","funders":"Environment and Climate Change Canada","keywords":"Biology; Virology; RNA; Zoology; Evolutionary biology; Genetics; Gene","score_opus":0.03159043941443254,"score_gpt":0.2438930415956055,"score_spread":0.21230260218117294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969866057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99942595,0.00003645989,0.0000067709047,0.000060335784,0.000053833668,0.00015008108,0.00007702939,0.000028471215,0.00016107509],"genre_scores_gemma":[0.99933124,0.00020713806,0.000024359033,0.0003366593,0.00004615613,0.000009607353,0.000007460343,0.0000012587415,0.000036145513],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993636,0.000024970679,0.00018776674,0.00018349256,0.00010432168,0.00013584291],"domain_scores_gemma":[0.99967045,0.00012194855,0.00012957444,0.00004059803,0.000016595428,0.000020832724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000054978103,0.00010229467,0.00019926718,0.000028240807,0.00005446447,0.000029040935,0.00007675145,0.000021102322,0.000019908757],"category_scores_gemma":[0.000037261027,0.000042896805,0.000028438695,0.00047695622,0.00012586101,0.0003225527,0.00007066351,0.00005411031,0.000020287534],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015690544,0.000059569775,0.5095565,0.0000036927074,0.0000055026185,1.1702411e-7,0.00003220802,9.076921e-7,0.4865187,0.00005903546,0.0000024617716,0.0037456288],"study_design_scores_gemma":[0.00009499635,0.000256176,0.98392785,0.000020002344,0.000006174784,6.0519403e-7,0.00012985065,0.000034337165,0.0143145155,0.0000075689877,0.0011019354,0.000105971245],"about_ca_topic_score_codex":0.0029974675,"about_ca_topic_score_gemma":0.0073567014,"teacher_disagreement_score":0.4743714,"about_ca_system_score_codex":0.000014094667,"about_ca_system_score_gemma":0.000004616045,"threshold_uncertainty_score":0.45312944},"labels":[],"label_agreement":null},{"id":"W2970043456","doi":"10.3390/v11090792","title":"Metagenomic Analysis of Virus Diversity and Relative Abundance in a Eutrophic Freshwater Harbour","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Environment and Climate Change Canada; York University","keywords":"Harbour; Eutrophication; Abundance (ecology); Metagenomics; Relative species abundance; Ecology; Biology; Diversity (politics); Genetics; Nutrient","score_opus":0.016449392224813387,"score_gpt":0.23385366990817802,"score_spread":0.21740427768336462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970043456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99920064,0.00005319778,0.000020786594,0.000022809505,0.000042160984,0.000074780655,0.00006986558,0.0000059460863,0.0005097995],"genre_scores_gemma":[0.9991569,0.000059437738,0.00020004081,0.00015037939,0.0000029292748,0.0000012914425,0.0000019528297,0.000003693964,0.00042340488],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995273,0.000031353142,0.00011605286,0.00017278784,0.00005295065,0.000099588244],"domain_scores_gemma":[0.99975455,0.000028952634,0.00006349846,0.00012463749,0.0000030033216,0.00002538239],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006535228,0.00006580837,0.00016684047,0.00009290708,0.000069841575,0.000008744971,0.00008825407,0.000029616818,0.0042171003],"category_scores_gemma":[0.000004940986,0.00005808381,0.000054001564,0.00026732596,0.00007622615,0.0003118635,0.00040368756,0.00006987866,0.00020591464],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022196627,0.000032322463,0.30603024,0.00000209697,0.00010701078,0.0000018789319,0.00073041255,0.0003286005,0.692583,0.000028781773,0.00002073166,0.000112709546],"study_design_scores_gemma":[0.00014547876,0.000025607707,0.97910887,0.0000055339856,0.00014337782,5.05517e-7,0.000041229003,0.0002616424,0.017502962,0.000033175827,0.0026565788,0.00007504846],"about_ca_topic_score_codex":0.010539599,"about_ca_topic_score_gemma":0.009767125,"teacher_disagreement_score":0.67508006,"about_ca_system_score_codex":0.000054290893,"about_ca_system_score_gemma":0.0000017818803,"threshold_uncertainty_score":0.9966932},"labels":[],"label_agreement":null},{"id":"W2971809307","doi":"10.3390/v11090824","title":"Erythroid Progenitor Cells in Atlantic Salmon (Salmo salar) May Be Persistently and Productively Infected with Piscine Orthoreovirus (PRV)","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada","funders":"Fiskeri - og havbruksnæringens forskningsfond; Norges Forskningsråd","keywords":"Salmo; Biology; Progenitor cell; Virology; Virus; RNA; Kidney; In situ hybridization; Progenitor; Inflammation; Immune system; Immunology; Messenger RNA; Cell biology; Gene; Stem cell; Genetics; Fish <Actinopterygii>; Fishery","score_opus":0.011783541039009249,"score_gpt":0.22285029928678204,"score_spread":0.2110667582477728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971809307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99566627,0.0018833001,0.0000024850342,0.0003056311,0.00027125992,0.0011247976,0.00005750662,0.00010747928,0.0005812953],"genre_scores_gemma":[0.9964763,0.0001307465,0.00007317243,0.00037856546,0.000039871593,0.000032838434,0.00014702299,0.00003634175,0.002685167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985623,0.00013216947,0.00024222444,0.00058746326,0.000050737373,0.0004251316],"domain_scores_gemma":[0.9994411,0.0000389635,0.00012303912,0.0003006524,0.0000619189,0.000034315988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012762517,0.00030819446,0.00036251603,0.00019495889,0.000098535485,0.000037152306,0.0001607378,0.00016009175,0.0003567515],"category_scores_gemma":[0.000019187355,0.00022737402,0.000058705802,0.0002894499,0.00021929479,0.00020945987,0.0001285895,0.0002339692,0.000540703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005753832,0.00024689443,0.2783345,0.000104717,0.00023458381,0.000022400669,0.00046218943,0.000002522727,0.7168343,0.00015424902,0.0028143425,0.00021390352],"study_design_scores_gemma":[0.006900695,0.0012346255,0.36476102,0.00028883657,0.0004787285,0.000120530705,0.0019193096,0.0000022250945,0.4066031,0.0000145406875,0.21652952,0.0011468739],"about_ca_topic_score_codex":0.0002680543,"about_ca_topic_score_gemma":0.00020001139,"teacher_disagreement_score":0.31023124,"about_ca_system_score_codex":0.000038630762,"about_ca_system_score_gemma":0.000062208885,"threshold_uncertainty_score":0.9272044},"labels":[],"label_agreement":null},{"id":"W2971842564","doi":"10.3390/v11090831","title":"Expression of APOBEC3 Lentiviral Restriction Factors in Cats","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institutes of Health; Deutsches Krebsforschungszentrum","keywords":"Feline immunodeficiency virus; CATS; Biology; Lentivirus; Virology; Puma; Peripheral blood mononuclear cell; Virus; Cell culture; Gene expression; Gene; Immunology; Viral disease; Genetics; Medicine","score_opus":0.0316809452877003,"score_gpt":0.28861476831209787,"score_spread":0.25693382302439755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971842564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99779284,0.0006107255,0.0000026026507,0.000008351064,0.00017768824,0.0001382339,0.00004438404,0.000014741114,0.0012104232],"genre_scores_gemma":[0.9991162,0.00009901692,0.0000070747246,0.0000074836107,0.00000354234,0.000006475827,0.000057071797,0.0000044102426,0.0006987339],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995073,0.00008735761,0.000110329616,0.00011660151,0.00002607068,0.00015231072],"domain_scores_gemma":[0.9997448,0.000069589725,0.000035549532,0.00012957951,0.000011978714,0.000008535061],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000048819486,0.000060657956,0.00011292919,0.00011512635,0.000022348058,0.0000025524275,0.00006325644,0.000076823635,0.00052736525],"category_scores_gemma":[0.000024870882,0.00004413235,0.000029433719,0.000083073486,0.000035194727,0.000080494676,0.000033149776,0.0000888198,0.0012182365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062149345,0.000096771095,0.37765896,0.000005519496,0.00000966394,9.946044e-7,0.00009406553,0.0000017359381,0.6212296,0.000043287007,0.00046248728,0.00033479536],"study_design_scores_gemma":[0.0006226834,0.00014018832,0.210993,0.00002341579,0.0000024079918,4.6423924e-7,0.00010641924,1.1628184e-7,0.78263223,0.000022748669,0.0054202992,0.000036004953],"about_ca_topic_score_codex":0.00085282285,"about_ca_topic_score_gemma":0.000049402766,"teacher_disagreement_score":0.16666594,"about_ca_system_score_codex":0.000024073339,"about_ca_system_score_gemma":0.000025068914,"threshold_uncertainty_score":0.9995594},"labels":[],"label_agreement":null},{"id":"W2971998896","doi":"10.3390/v11090830","title":"Hepatitis C Core-Antigen Testing from Dried Blood Spots","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; Toronto Public Health; Mount Sinai Hospital; Sunnybrook Health Science Centre; Toronto Liver Centre; Toronto General Hospital; University of Toronto; University Health Network; Western University","funders":"","keywords":"Dried blood; Virology; Antigen; Spots; Core protein; Medicine; Hepatitis; Immunology; Chemistry; Pathology; Chromatography","score_opus":0.10637068131247232,"score_gpt":0.34149739871727375,"score_spread":0.23512671740480143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971998896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9708021,0.0003562446,0.000012483008,0.00010231902,0.00021908422,0.0005009763,0.000121670855,0.0001988895,0.027686201],"genre_scores_gemma":[0.9935065,0.00035119327,0.0031720193,0.0016156749,0.0003031303,0.000021442855,0.000046667818,0.000060400176,0.0009229714],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982111,0.000050866227,0.00030286514,0.00040557745,0.00058886013,0.0004407298],"domain_scores_gemma":[0.99849993,0.00044301164,0.00007434298,0.0005822037,0.00016711753,0.00023337765],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00017358937,0.00017724797,0.0003767813,0.00014518596,0.00007515433,0.0000486046,0.00018351334,0.00012022225,0.0036354298],"category_scores_gemma":[0.0009899923,0.0001650971,0.00007019055,0.00037723905,0.00007594557,0.00015503763,0.00012313199,0.00028446296,0.0056844126],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043596545,0.00009396056,0.8262904,0.000026756285,0.00009284604,0.00018577166,0.00009316965,0.0000011819468,0.16133848,0.000072297255,0.0010462839,0.010715233],"study_design_scores_gemma":[0.0017801875,0.00033782056,0.87539744,0.0002620725,0.00007249242,0.000013851656,0.000025332856,0.00046882476,0.082756795,0.00019463242,0.03844543,0.00024511426],"about_ca_topic_score_codex":0.01560408,"about_ca_topic_score_gemma":0.00037524753,"teacher_disagreement_score":0.07858168,"about_ca_system_score_codex":0.00004941651,"about_ca_system_score_gemma":0.00021630686,"threshold_uncertainty_score":0.9972754},"labels":[],"label_agreement":null},{"id":"W2972848998","doi":"10.3390/v11090854","title":"Diversity and Host Specificity Revealed by Biological Characterization and Whole Genome Sequencing of Bacteriophages Infecting Salmonella enterica","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fisheries and Oceans Canada; University of Guelph; Université Laval; Agriculture and Agri-Food Canada; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Genome Canada; Health Canada; Université Laval","keywords":"Biology; Salmonella enterica; Genome; Genetics; Pathogenicity island; Virulence; Salmonella; Bacteriophage; Gene; Bacteria; Escherichia coli","score_opus":0.022001848732033612,"score_gpt":0.22015796351295977,"score_spread":0.19815611478092615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972848998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99934936,0.000032614356,0.00008685211,0.000027246428,0.00006950604,0.00014087306,0.00011944398,0.00002007617,0.0001540265],"genre_scores_gemma":[0.99928796,0.00024974946,0.00008302023,0.00015317314,0.000015834077,0.0000012354308,0.000017908325,0.00000599498,0.00018511504],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99940026,0.000042530166,0.00014667922,0.00023122439,0.000051691604,0.00012762824],"domain_scores_gemma":[0.99970114,0.000030318533,0.0001190403,0.00009506875,0.0000060949924,0.00004836026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000081980244,0.000100028185,0.00015420861,0.000022229207,0.00027917867,0.000023897213,0.00006746548,0.000051493662,0.0007352204],"category_scores_gemma":[0.000013436273,0.00008883434,0.000021931406,0.000072890856,0.00011377235,0.00030904487,0.00081450277,0.000072768365,0.000049676484],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012042595,0.000016827866,0.279583,0.0000075318676,0.0000047687336,7.49923e-7,0.00039903683,3.9936768e-7,0.71960294,8.2554794e-7,0.0000053578524,0.00036648428],"study_design_scores_gemma":[0.00012120066,0.00008327042,0.95297927,0.000015799875,0.0000063942102,0.000009692156,0.00007800195,0.000009999271,0.04309324,0.0000012525206,0.00350554,0.00009634795],"about_ca_topic_score_codex":0.00069431117,"about_ca_topic_score_gemma":0.000011059311,"teacher_disagreement_score":0.67650974,"about_ca_system_score_codex":0.000053704545,"about_ca_system_score_gemma":0.0000018812946,"threshold_uncertainty_score":0.8050148},"labels":[],"label_agreement":null},{"id":"W2973896221","doi":"10.3390/v11090869","title":"Bacterial Virus Lambda Gpd-Fusions to Cathelicidins, α- and β-Defensins, and Disease-Specific Epitopes Evaluated for Antimicrobial Toxicity and Ability to Support Phage Display","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Epitope; Antimicrobial peptides; Capsid; Defensin; Biology; Peptide; Antimicrobial; Bacteriophage; Cathelicidin; Phage display; Amino acid; Biochemistry; Microbiology; Molecular biology; Chemistry; Escherichia coli; Gene; Antigen; Genetics","score_opus":0.0244619047553273,"score_gpt":0.2763728187464779,"score_spread":0.2519109139911506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973896221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961349,0.000033377535,0.00008028769,0.00067632063,0.0004603947,0.0011949376,0.00130785,0.000042334985,0.00006964092],"genre_scores_gemma":[0.99670714,0.00013666815,0.00076442247,0.0018957139,0.00009949469,0.00003529927,0.00004106659,0.000027432592,0.00029278704],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99860895,0.000058091337,0.00025916466,0.00063609885,0.000105212304,0.00033248443],"domain_scores_gemma":[0.9990687,0.00010794355,0.000057606103,0.00029737936,0.000018645484,0.00044972193],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020002577,0.0002330387,0.00026233267,0.00005147457,0.00026329013,0.00016899835,0.00011791468,0.00006794409,0.0013349782],"category_scores_gemma":[0.00008682378,0.00020810781,0.00004928781,0.00011472134,0.00014022364,0.00034578072,0.00039937324,0.00008193293,0.00029297583],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039234626,0.00014432022,0.0051345616,0.000021030504,0.000008687179,0.0000023136242,0.00037534238,0.000008661251,0.9831735,0.000017843671,0.0073548923,0.0033664946],"study_design_scores_gemma":[0.0013235157,0.0005627814,0.48603207,0.000061739855,0.00007921666,0.000026294589,0.00007231698,0.00005200102,0.22933811,0.000043252618,0.28178325,0.0006254412],"about_ca_topic_score_codex":0.0006738986,"about_ca_topic_score_gemma":0.0011458553,"teacher_disagreement_score":0.7538354,"about_ca_system_score_codex":0.00007017661,"about_ca_system_score_gemma":0.000020363172,"threshold_uncertainty_score":0.99957794},"labels":[],"label_agreement":null},{"id":"W2974292179","doi":"10.3390/v11100886","title":"Zika Virus Pathogenesis: From Early Case Reports to Epidemics","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Zika virus; Guillain-Barre syndrome; Medicine; Outbreak; Flaviviridae; Pathogenesis; Virology; Microcephaly; Virus; Pediatrics; Immunology; Viral disease","score_opus":0.10931428618215401,"score_gpt":0.3825766659540056,"score_spread":0.2732623797718516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2974292179","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034039186,0.9913209,0.000039469174,0.000031540378,0.0010347412,0.0021890835,0.0015777351,0.0001520814,0.00025051774],"genre_scores_gemma":[0.00016558213,0.9934215,0.00020918426,0.0032188322,0.001492946,0.00039888528,0.00024919093,0.00018828303,0.00065560144],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964975,0.00018725084,0.0012979495,0.0010923856,0.00040782787,0.0005170725],"domain_scores_gemma":[0.9963378,0.00035433212,0.00062761264,0.0019106196,0.0001201393,0.0006495034],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002945482,0.00068649155,0.0032589866,0.00023587367,0.000076584,0.00007315953,0.00016504191,0.00047986914,0.00055271346],"category_scores_gemma":[0.0005623064,0.00052814756,0.0011239338,0.0003226763,0.000029753945,0.00008619342,0.00016108001,0.00036557912,0.0016641666],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073692485,0.00016108535,0.00030563126,0.0048480434,0.0006467073,0.06150173,0.000034319146,5.265782e-7,0.00004045076,0.000021882517,0.0066511347,0.9257148],"study_design_scores_gemma":[0.0002733242,0.00018243755,0.00008935937,0.008480146,0.007688439,0.0041939802,0.000015548292,0.0000021757457,0.0000068945947,0.000017303904,0.9785295,0.00052089966],"about_ca_topic_score_codex":0.0029712697,"about_ca_topic_score_gemma":0.00008480672,"teacher_disagreement_score":0.97187835,"about_ca_system_score_codex":0.00013975728,"about_ca_system_score_gemma":0.0006635943,"threshold_uncertainty_score":0.999717},"labels":[],"label_agreement":null},{"id":"W2974333472","doi":"10.3390/v11090877","title":"Prevalence and Correlates of Pre-Treatment HIV Drug Resistance among HIV-Infected Children in Ethiopia","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; AIDS Vancouver; Simon Fraser University","funders":"Canadian Institutes of Health Research; Vetenskapsrådet","keywords":"Drug resistance; Cart; Medicine; Virology; Population; Transmission (telecommunications); Viral load; Genotyping; HIV drug resistance; Reverse transcriptase; Protease inhibitor (pharmacology); Reverse-transcriptase inhibitor; Immunology; Human immunodeficiency virus (HIV); Biology; Antiretroviral therapy; Environmental health; Genotype; Polymerase chain reaction; Microbiology","score_opus":0.007621139785305507,"score_gpt":0.24477301966805917,"score_spread":0.23715187988275366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2974333472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958506,0.0017202614,0.0000018083088,0.00033057036,0.00004260654,0.000864014,0.000026918635,0.000052061376,0.0011111243],"genre_scores_gemma":[0.9478201,0.0009054627,0.0003896353,0.00004035583,0.000013630027,0.000037679205,0.000030173032,0.000017771441,0.050745178],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989984,0.000047760215,0.00027920166,0.00030217893,0.00017758193,0.00019486228],"domain_scores_gemma":[0.99939704,0.0001320477,0.00010350924,0.00026009444,0.000034238124,0.00007307761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008829111,0.00019011728,0.00033992404,0.00013340259,0.00002763078,0.00000974998,0.000054599306,0.00007001723,0.00014624142],"category_scores_gemma":[0.000036927486,0.00014258764,0.00004248984,0.00016658647,0.000081393,0.00010914818,0.00003570675,0.00009339876,0.00010126174],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021332267,0.00027250373,0.996216,0.00013579255,0.000119433505,0.000012670846,0.0016191172,0.0000030286346,0.0005031365,0.00009089853,0.00066415966,0.00014996213],"study_design_scores_gemma":[0.0024819826,0.00005985906,0.9826299,0.00073351397,0.00010825991,0.0000041523317,0.00003203018,0.000020667281,0.013136278,0.000029844672,0.0006325999,0.00013091732],"about_ca_topic_score_codex":0.00007631758,"about_ca_topic_score_gemma":0.00019177538,"teacher_disagreement_score":0.049634054,"about_ca_system_score_codex":0.00009202212,"about_ca_system_score_gemma":0.00007570934,"threshold_uncertainty_score":0.5814555},"labels":[],"label_agreement":null},{"id":"W2977276103","doi":"10.3390/v11100918","title":"Peste des Petits Ruminants Virus-Like Particles Induce a Potent Humoral and Cellular Immune Response in Goats","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Peste-des-petits-ruminants virus; Virology; Immune system; Biology; Virus-like particle; Antibody; Peste-des-Petits-Ruminants; Vaccination; Virus; Cellular immunity; Immunology; Recombinant DNA","score_opus":0.03335693640411613,"score_gpt":0.2888570248812147,"score_spread":0.25550008847709854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2977276103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994508,0.0046496834,0.0000017421335,0.00025891612,0.00010320151,0.00030899534,0.000016142782,0.000049175793,0.00010410874],"genre_scores_gemma":[0.9983736,0.00019689719,0.000074072756,0.00094799895,0.000032371732,0.000019167925,0.0000049873674,0.000022157526,0.00032872258],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99876803,0.00019840304,0.00025540346,0.00029204562,0.00014648336,0.00033960654],"domain_scores_gemma":[0.9993835,0.00010721927,0.000058969155,0.00027920783,0.000028064558,0.00014303376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030757947,0.00017056738,0.00030743063,0.00014315687,0.000077596356,0.000018835934,0.000078449026,0.00010725887,0.00015274812],"category_scores_gemma":[0.00019194011,0.00014330319,0.000055011264,0.00016425144,0.00021801089,0.00019158339,0.000084734704,0.00016924129,0.0003566184],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005568394,0.00027501,0.31003043,0.00006452053,0.0000268753,0.00024590813,0.00039790833,0.0000028347397,0.6821623,0.00006956496,0.000044764067,0.0011115165],"study_design_scores_gemma":[0.0016733737,0.0008051122,0.84239024,0.00019150338,0.00006466205,0.00003076768,0.00026725116,0.000035720106,0.153272,0.00018934695,0.00093189947,0.00014814621],"about_ca_topic_score_codex":0.00016496213,"about_ca_topic_score_gemma":0.00004648823,"teacher_disagreement_score":0.5323598,"about_ca_system_score_codex":0.00002778711,"about_ca_system_score_gemma":0.00007365223,"threshold_uncertainty_score":0.5843734},"labels":[],"label_agreement":null},{"id":"W2977801863","doi":"10.3390/v11100910","title":"Host Range of Bacteriophages Against a World-Wide Collection of Erwinia amylovora Determined Using a Quantitative PCR Assay","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vineland Research and Innovation Centre; Brock University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Erwinia; Host (biology); Biology; Microbiology; Bacteriophage; Bacteria; Escherichia coli; Genetics; Gene","score_opus":0.050724376655596426,"score_gpt":0.26031654246374053,"score_spread":0.2095921658081441,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2977801863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985094,0.00021672809,0.000002428242,0.000040739396,0.00018981114,0.00026124436,0.0003535956,0.000028078137,0.00039794476],"genre_scores_gemma":[0.9992208,0.000067193156,0.00041371197,0.00010166972,0.000035212805,0.00000688377,0.000010883077,0.0000016015924,0.0001420652],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998986,0.00014546856,0.00031491046,0.00021527917,0.0001536466,0.00018467614],"domain_scores_gemma":[0.9988328,0.0006821335,0.00029815265,0.0000597994,0.00009332388,0.000033756718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002086417,0.00014688479,0.00037641154,0.000046799683,0.000075227916,0.00001797431,0.00014601016,0.000054418128,0.00015804151],"category_scores_gemma":[0.00015341581,0.000063785155,0.000097684715,0.00051603303,0.00008350893,0.00017899186,0.00007579693,0.000054676882,0.000020932313],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015943924,0.00005046047,0.12502524,0.000021725136,0.0000391261,0.0000030201893,0.00015015781,0.0000013374475,0.8738538,0.000013302253,0.000045996443,0.0006363611],"study_design_scores_gemma":[0.00026644848,0.00027766352,0.84034634,0.00013248881,0.000029656749,0.0000026084222,0.0002856526,0.000069548165,0.15738097,0.000009298307,0.0010361472,0.00016318713],"about_ca_topic_score_codex":0.0003154956,"about_ca_topic_score_gemma":0.0011643139,"teacher_disagreement_score":0.71647286,"about_ca_system_score_codex":0.000024084076,"about_ca_system_score_gemma":0.000014015415,"threshold_uncertainty_score":0.2601083},"labels":[],"label_agreement":null},{"id":"W2979276452","doi":"10.3390/v11100914","title":"Immunological Effects and Viral Gene Expression Determine the Efficacy of Oncolytic Measles Vaccines Encoding IL-12 or IL-15 Agonists","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"Deutsche Krebshilfe; European Regional Development Fund; Deutsche Forschungsgemeinschaft; State Education Development Agency Republic of Latvia; Else Kröner-Fresenius-Stiftung; National Science Foundation","keywords":"Oncolytic virus; Measles virus; Immunotherapy; Immune system; T cell; Cancer research; Genetic enhancement; Biology; Virology; Fusion protein; Immunology; Virotherapy; Cancer immunotherapy; Viral vector; Gene; Vaccination; Measles; Recombinant DNA","score_opus":0.028922394565427435,"score_gpt":0.31145575714708196,"score_spread":0.2825333625816545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979276452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964736,0.0027436158,0.000020481173,0.000050815994,0.00011627176,0.0004758546,0.000020087758,0.000017551976,0.00008172556],"genre_scores_gemma":[0.99828523,0.00092046906,0.00016736466,0.00022428972,0.00015888807,0.00003447118,0.000012146591,0.00002746452,0.00016966563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986885,0.00021812636,0.00022845314,0.0003673909,0.00020062075,0.0002968885],"domain_scores_gemma":[0.99901485,0.0002408398,0.00010373891,0.00052102684,0.000055994577,0.000063524334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002698114,0.00020439537,0.00025731753,0.000052849486,0.00011062659,0.000034431745,0.0003495858,0.00015358793,0.00005775758],"category_scores_gemma":[0.0003085469,0.00011874987,0.00007565351,0.000088589906,0.00013756724,0.000008891641,0.0002975466,0.00012512328,0.000019415447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003911114,0.000088275134,0.0033071663,0.000051736213,0.000059008144,0.000006982525,0.00005538892,0.00002492365,0.9820869,0.0000038312724,0.00008807031,0.010316608],"study_design_scores_gemma":[0.0015687923,0.003586452,0.0063821613,0.0000557933,0.000019077928,0.000017238222,0.000031325868,0.000038559272,0.9858804,0.000013336102,0.0022411712,0.00016569303],"about_ca_topic_score_codex":0.000014146869,"about_ca_topic_score_gemma":0.000029303419,"teacher_disagreement_score":0.010150914,"about_ca_system_score_codex":0.000013902937,"about_ca_system_score_gemma":0.00008112558,"threshold_uncertainty_score":0.48424792},"labels":[],"label_agreement":null},{"id":"W2979390307","doi":"10.3390/v11100921","title":"Interferon γ and α Have Differential Effects on SAMHD1, a Potent Antiviral Protein, in Feline Lymphocytes","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"SAMHD1; Biology; Phosphorylation; Molecular biology; Interferon; Virology; Viral replication; Reverse transcriptase; Cell culture; Nuclear protein; Cell biology; Transcription factor; RNA; Virus; Gene; Biochemistry; Genetics","score_opus":0.012336645793656073,"score_gpt":0.2583788660129793,"score_spread":0.24604222021932326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979390307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780506,0.00090208516,0.00000584881,0.000080834645,0.00014979015,0.00062890764,0.000038928894,0.000029220622,0.0003593316],"genre_scores_gemma":[0.99867475,0.0000657482,0.000011594303,0.000110258974,0.00002201669,0.0000621648,0.000048727456,0.000011585271,0.0009931459],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911475,0.0001586874,0.00012637829,0.0002609028,0.00003555236,0.000303732],"domain_scores_gemma":[0.9996647,0.00011182166,0.000029471472,0.00016100694,0.000012272819,0.00002071702],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000050627168,0.0001506028,0.00021877028,0.00012329684,0.00004371245,0.000018589315,0.00007929982,0.000103804516,0.00015787472],"category_scores_gemma":[0.00003596233,0.00010783366,0.000035526922,0.000039832707,0.0000675955,0.000055892364,0.00008648947,0.00014673933,0.0019309028],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016536191,0.0003757559,0.049587224,0.00005829646,0.000114586226,0.000039195413,0.00015106521,3.1256877e-7,0.906851,0.00012719574,0.00027950638,0.040762223],"study_design_scores_gemma":[0.0053642294,0.0022674722,0.056954242,0.0002038384,0.000010661607,0.000008179846,0.00004405832,0.000005527715,0.93192184,0.00004655718,0.003027951,0.00014542804],"about_ca_topic_score_codex":0.00029583904,"about_ca_topic_score_gemma":0.00009997705,"teacher_disagreement_score":0.040616795,"about_ca_system_score_codex":0.00005921519,"about_ca_system_score_gemma":0.000027562606,"threshold_uncertainty_score":0.99884623},"labels":[],"label_agreement":null},{"id":"W2979595210","doi":"10.3390/v11100944","title":"Canine and Phocine Distemper Viruses: Global Spread and Genetic Basis of Jumping Species Barriers","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada","funders":"Queen's University; Queen's University Belfast; Department of Education and Learning, Northern Ireland","keywords":"Canine distemper; Morbillivirus; Biology; Paramyxoviridae; Virology; Mononegavirales; Zoonosis; Virus; Veterinary virology; Viral disease; Zoology","score_opus":0.08164903543297078,"score_gpt":0.36172609643923775,"score_spread":0.28007706100626695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979595210","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024508923,0.97307163,0.000003507218,0.000030160849,0.0001512897,0.00064881,0.000926101,0.000037222027,0.00062236004],"genre_scores_gemma":[0.004617877,0.99397767,0.00006715746,0.00081669854,0.00013756464,0.000026840513,0.000037890586,0.000043093703,0.00027523152],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983415,0.00012034348,0.0005556455,0.00050876924,0.00019271778,0.00028100368],"domain_scores_gemma":[0.9988547,0.00014083387,0.00026824084,0.00041162685,0.00004299292,0.00028161216],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007997399,0.00045298206,0.0019659547,0.0001318988,0.00007542174,0.000020006462,0.0001181588,0.00030862758,0.00034689653],"category_scores_gemma":[0.00024653386,0.00033285905,0.00024003255,0.00021018993,0.00044760242,0.00008097599,0.00014594174,0.00019047454,0.000036032267],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000817379,0.00029657196,0.23949762,0.15966153,0.004526905,0.0004388939,0.00022277594,0.0000013162615,0.00040406414,0.0009440176,0.007158596,0.58603036],"study_design_scores_gemma":[0.0009506064,0.00045484325,0.028220605,0.011329795,0.007316586,0.00020879162,0.00006865052,0.0000020904436,0.000042059968,0.000018704646,0.9509696,0.0004176635],"about_ca_topic_score_codex":0.00024336773,"about_ca_topic_score_gemma":0.00007972522,"teacher_disagreement_score":0.943811,"about_ca_system_score_codex":0.0000652941,"about_ca_system_score_gemma":0.00032550152,"threshold_uncertainty_score":0.9999123},"labels":[],"label_agreement":null},{"id":"W2980365385","doi":"10.3390/v11100959","title":"The Evolutionary Arms Race between Virus and NK Cells: Diversity Enables Population-Level Virus Control","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Banting Research Foundation","keywords":"Biology; Virology; Virus; Human cytomegalovirus; Human leukocyte antigen; Population; Hepatitis C virus; Immunology; Gene; Genetics; Antigen; Medicine","score_opus":0.07767904979904545,"score_gpt":0.2954045100649722,"score_spread":0.21772546026592676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980365385","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00027022784,0.9930914,0.000071015755,0.000027276792,0.0050576334,0.00071225595,0.00046718962,0.00008716536,0.00021585079],"genre_scores_gemma":[0.0009250621,0.98744446,0.000008547649,0.00018894527,0.00016232258,0.000034387762,0.0005219474,0.0000380911,0.010676236],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978613,0.00063505827,0.00058649667,0.0004640945,0.00007440966,0.00037861467],"domain_scores_gemma":[0.99757034,0.0013283506,0.0005388639,0.000453924,0.00007905345,0.000029445458],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003225565,0.0004374835,0.0010774008,0.00017136632,0.0012459775,0.000064095264,0.00036604994,0.0006298468,0.00054594094],"category_scores_gemma":[0.00010856905,0.0002986201,0.00033558995,0.00013461453,0.00020289554,0.00026406476,0.00035551432,0.00070168526,0.0031538918],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000425273,0.00021682603,0.0021451733,0.0030491857,0.003739892,0.0000056385406,0.0002509236,0.000005552146,0.0030337658,0.00045341562,0.13967331,0.8470011],"study_design_scores_gemma":[0.00051753974,0.00007968255,0.00092807406,0.0006713912,0.00097020395,0.000023127046,0.000056054574,8.378428e-7,0.0002169818,0.000023451632,0.996174,0.00033870392],"about_ca_topic_score_codex":0.0017202689,"about_ca_topic_score_gemma":0.000053534714,"teacher_disagreement_score":0.8565006,"about_ca_system_score_codex":0.00015748203,"about_ca_system_score_gemma":0.00009053261,"threshold_uncertainty_score":0.9999466},"labels":[],"label_agreement":null},{"id":"W2981522320","doi":"10.3390/v11110991","title":"Metagenomic Analysis of Virioplankton from the Pelagic Zone of Lake Baikal","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Siberian Branch, Russian Academy of Sciences; Russian Foundation for Basic Research","keywords":"Human virome; Siphoviridae; Podoviridae; Biology; Metagenomics; Ecology; Biota; Detritus; Bacterioplankton; Phytoplankton; Bacteriophage; Genetics","score_opus":0.011734556310532393,"score_gpt":0.23311665830770464,"score_spread":0.22138210199717226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981522320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99783,0.00006806963,0.000051002204,0.000037775673,0.00010516787,0.000070320835,0.00037446714,0.0000058842775,0.0014573315],"genre_scores_gemma":[0.99908525,0.000033250115,0.00014340311,0.00022386388,0.000011835553,0.000001291132,0.000022401602,0.00000490823,0.00047379063],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994974,0.000034853758,0.00017486399,0.00013009284,0.0000799334,0.000082850005],"domain_scores_gemma":[0.99948037,0.000100545,0.00012115153,0.00027436906,0.0000043049918,0.000019272347],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007357873,0.00006446003,0.00018269208,0.000032894815,0.000025742138,0.0000098257415,0.00019087175,0.000029595052,0.027434682],"category_scores_gemma":[0.000006946533,0.00004355973,0.00012470385,0.00026410542,0.00008322102,0.00010758264,0.00009550165,0.000057766607,0.0006436116],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016971324,0.000038015874,0.0579794,0.0000011407856,0.0002578884,2.9170667e-7,0.0002889752,0.00052845705,0.9399029,0.000015927377,0.00025124257,0.0007187765],"study_design_scores_gemma":[0.00010447265,0.00002997323,0.86921984,0.0000051771826,0.0004966614,4.1416695e-7,0.00009945138,0.0001472206,0.092793666,0.000011698219,0.03702607,0.00006533022],"about_ca_topic_score_codex":0.005941096,"about_ca_topic_score_gemma":0.009769561,"teacher_disagreement_score":0.84710926,"about_ca_system_score_codex":0.000015430778,"about_ca_system_score_gemma":0.0000039305132,"threshold_uncertainty_score":0.97345436},"labels":[],"label_agreement":null},{"id":"W2982012048","doi":"10.3390/v11110987","title":"Generation and Characterization of a Mouse-Adapted Makona Variant of Ebola Virus","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Ebola virus; Virology; Outbreak; Biology; Ebolavirus; Viremia; Nucleoprotein; Virus; Virulence; Reverse genetics; Genome; Gene; Genetics","score_opus":0.05642385256735711,"score_gpt":0.31557806686076784,"score_spread":0.25915421429341073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982012048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986697,0.00005143629,0.00038661348,0.00004678816,0.000049194958,0.00023292073,0.000040218576,0.000013915098,0.00050923164],"genre_scores_gemma":[0.9988544,0.00018580037,0.00012204696,0.000111461624,0.0000501908,0.000005375774,0.000034415178,0.000009791697,0.0006265462],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999497,0.000026617572,0.00016858426,0.00010016348,0.00013484096,0.00007282514],"domain_scores_gemma":[0.9996648,0.000013624006,0.00006470485,0.00011957739,0.000103986466,0.00003331955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000930932,0.000053620424,0.0001579479,0.000119964505,0.000018650962,0.0000069930934,0.000019392271,0.000048300877,0.00024679978],"category_scores_gemma":[0.000019926314,0.000043525928,0.000024103621,0.00012584067,0.00003058689,0.00009381179,0.000021421187,0.000050956205,0.00002069106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008429364,0.00008285319,0.00422986,0.00006485122,0.000026014879,0.0000012100295,0.000053856664,0.0000022404658,0.99196064,0.0006522688,0.00002469666,0.002817235],"study_design_scores_gemma":[0.00056377484,0.0003296149,0.039220836,0.000030968222,0.000021079573,0.000011391523,0.000012768946,0.0022646582,0.9556829,0.0000052504784,0.0018140882,0.000042673248],"about_ca_topic_score_codex":0.00027877456,"about_ca_topic_score_gemma":0.000013329785,"teacher_disagreement_score":0.036277723,"about_ca_system_score_codex":0.000010530544,"about_ca_system_score_gemma":0.000041878975,"threshold_uncertainty_score":0.27022845},"labels":[],"label_agreement":null},{"id":"W2982555236","doi":"10.3390/v11111006","title":"Rabies Surveillance Identifies Potential Risk Corridors and Enables Management Evaluation","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Centers for Disease Control and Prevention","keywords":"Enzootic; Rabies; Occupancy; Wildlife; Rabies virus; Vaccination; Geography; Disease surveillance; Environmental health; Public health surveillance; Wildlife disease; Public health; Veterinary medicine; Virology; Biology; Medicine; Ecology; Virus","score_opus":0.010895291267331941,"score_gpt":0.24609334985852926,"score_spread":0.23519805859119733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982555236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846366,0.011367592,0.00009885146,0.00012761487,0.0018737962,0.000407577,0.000026561911,0.00006325803,0.0013981696],"genre_scores_gemma":[0.9935614,0.0018250786,0.000022423514,0.00034897026,0.000029060251,0.000044221782,0.000037346304,0.0000091591655,0.0041223783],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985355,0.0006307181,0.00023428358,0.0003098936,0.000041898624,0.00024768195],"domain_scores_gemma":[0.9992891,0.0002509476,0.00014343896,0.0002516443,0.00005291403,0.000011964279],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010262574,0.00013961639,0.00025748918,0.00008102273,0.00019256168,0.000020032661,0.0001262634,0.00014960884,0.0010411616],"category_scores_gemma":[0.0001482789,0.00011682676,0.000050985713,0.000053745753,0.00019450205,0.00013622393,0.00008144646,0.00014334242,0.0011275553],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010029025,0.000118251,0.81478167,0.00010569911,0.0015429718,0.00000836983,0.000430493,0.0014049631,0.09576736,0.004042238,0.0277823,0.053012803],"study_design_scores_gemma":[0.0046063857,0.00020641509,0.9028216,0.00004860396,0.00031689845,0.000041531934,0.001481912,0.00043551874,0.011168022,0.005792484,0.07258834,0.00049230224],"about_ca_topic_score_codex":0.00020768122,"about_ca_topic_score_gemma":0.00006899181,"teacher_disagreement_score":0.088039935,"about_ca_system_score_codex":0.000015133333,"about_ca_system_score_gemma":0.000012922183,"threshold_uncertainty_score":0.999872},"labels":[],"label_agreement":null},{"id":"W2982578784","doi":"10.3390/v11110999","title":"The Roles of Ebola Virus Soluble Glycoprotein in Replication, Pathogenesis, and Countermeasure Development","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Ebola virus; Pathogenesis; Biology; Virology; Glycoprotein; Immunogenicity; Virus; Immune system; Ebolavirus; Filoviridae; Antibody; Gene; Immunology; Viral disease; Genetics","score_opus":0.11775731251044155,"score_gpt":0.3966052130096231,"score_spread":0.2788479004991815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982578784","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009250395,0.9973844,0.000013110927,0.000022372258,0.00006493101,0.0012653599,0.00002302065,0.000016892975,0.0002848311],"genre_scores_gemma":[0.00025848212,0.9983785,0.000065808206,0.00004126284,0.00005161098,0.00030588647,0.000023934923,0.000034120367,0.0008403664],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99841774,0.00012246192,0.00058856787,0.00035188373,0.00029576727,0.00022358449],"domain_scores_gemma":[0.9988427,0.00013839507,0.00021071672,0.0006122913,0.00013574868,0.000060105525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080148835,0.00021111296,0.00082831166,0.00019492974,0.00011693164,0.00003946758,0.00014322835,0.00018758717,0.00002222849],"category_scores_gemma":[0.0001641371,0.00012454444,0.00010902768,0.00029060896,0.00012750839,0.00004759648,0.00011165147,0.00026111197,0.00006462685],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029485054,0.00006512828,0.0001984757,0.0056106145,0.00008788641,0.0000038621597,0.000039299714,1.0882208e-7,0.0008369626,0.00008136063,0.00029076685,0.99275607],"study_design_scores_gemma":[0.00021801762,0.00006896358,0.00034521762,0.005418753,0.00011117344,0.000036511883,0.000020703126,0.00000216871,0.0012792867,0.000005961367,0.9923731,0.0001201059],"about_ca_topic_score_codex":0.00014591149,"about_ca_topic_score_gemma":0.00044245386,"teacher_disagreement_score":0.99263597,"about_ca_system_score_codex":0.000111171496,"about_ca_system_score_gemma":0.0007536277,"threshold_uncertainty_score":0.5078775},"labels":[],"label_agreement":null},{"id":"W2983518434","doi":"10.3390/v11111061","title":"The U3 and Env Proteins of Jaagsiekte Sheep Retrovirus and Enzootic Nasal Tumor Virus Both Contribute to Tissue Tropism","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Tropism; Biology; Tissue tropism; Enzootic; Virology; Retrovirus; Rookery; Pathogenesis; Glycoprotein; Virus; Immunology; Molecular biology; Medicine","score_opus":0.01650756392874019,"score_gpt":0.28975910334401117,"score_spread":0.27325153941527097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2983518434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995898,0.0016858272,0.00004652555,0.00012275435,0.00025600503,0.0010472088,0.00018864326,0.000060148803,0.00069485017],"genre_scores_gemma":[0.9981663,0.00015120121,0.00008207612,0.0010543814,0.00011525581,0.000081555205,0.0000032398227,0.0000311129,0.00031482548],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99875104,0.00013523568,0.00027769056,0.00031521125,0.00015222824,0.00036860927],"domain_scores_gemma":[0.99906856,0.00026656958,0.00012399007,0.0003426452,0.000054999346,0.00014323677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018665878,0.00019229065,0.00032736847,0.000077541714,0.00018021556,0.00006251092,0.00014038295,0.00007858265,0.00017117044],"category_scores_gemma":[0.00016766792,0.00014151818,0.000047117184,0.00009933946,0.00013971153,0.000111112444,0.00017945125,0.00013095555,0.00020669136],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027925572,0.00026885894,0.063073345,0.00026205252,0.0002645518,0.0002280261,0.0006565061,0.000007412622,0.9112587,0.011640256,0.0033585497,0.0061891857],"study_design_scores_gemma":[0.0046315524,0.013499332,0.4350144,0.00016839361,0.00026603468,0.0005378933,0.00033744168,0.00014235063,0.057155993,0.0016940268,0.4855878,0.00096476875],"about_ca_topic_score_codex":0.0010922702,"about_ca_topic_score_gemma":0.00021618821,"teacher_disagreement_score":0.85410273,"about_ca_system_score_codex":0.00003458722,"about_ca_system_score_gemma":0.00005331695,"threshold_uncertainty_score":0.5770944},"labels":[],"label_agreement":null},{"id":"W2984486231","doi":"10.3390/v12010012","title":"The Zebrafish Xenograft Platform—A Novel Tool for Modeling KSHV-Associated Diseases","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beatrice Hunter Cancer Research Institute; Canadian Bioethics Society; University of Ottawa; Dalhousie University","funders":"Canadian Institutes of Health Research; University of California, San Francisco; Dalhousie University; École Polytechnique Fédérale de Lausanne; Canadian Cancer Society; Cure Brain Cancer Foundation; Nova Scotia Health Research Foundation; Canadian Imperial Bank of Commerce; Beatrice Hunter Cancer Research Institute; Cancer Research Institute","keywords":"Lytic cycle; Zebrafish; Biology; Primary effusion lymphoma; Virus latency; Virology; Cancer research; Kaposi's sarcoma-associated herpesvirus; Viral replication; Virus; Gene; Herpesviridae; Genetics","score_opus":0.027168947556715315,"score_gpt":0.2536263081697444,"score_spread":0.2264573606130291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2984486231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98788875,0.001653239,0.0020039617,0.00015592604,0.0067501497,0.0005416106,0.000065095475,0.00018909846,0.00075214537],"genre_scores_gemma":[0.98643833,0.000081031525,0.000013756582,0.001061634,0.00004341385,0.000058780897,0.00017287275,0.000021643902,0.012108513],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992458,0.000028389037,0.00023762444,0.00017851018,0.00002917142,0.00028048575],"domain_scores_gemma":[0.99925077,0.00033607468,0.00009718509,0.00021309532,0.00009288582,0.000009993191],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013349901,0.00012694842,0.00014983877,0.000046138884,0.0004030031,0.000054704382,0.00015073696,0.00013186746,0.0004462093],"category_scores_gemma":[0.00021229609,0.000088588866,0.00013294126,0.00006751195,0.00004005174,0.00025465986,0.00004045608,0.00014984624,0.0009555119],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015961112,0.0005618272,0.0039392244,0.00002535379,0.0006571607,2.311168e-7,0.00024290607,0.0007133427,0.9156853,0.004027088,0.069282256,0.0032691883],"study_design_scores_gemma":[0.0035055426,0.00046651057,0.0016783718,0.00006222122,0.000113343835,0.000008336238,0.0007077601,0.0043275375,0.057674937,0.00025347812,0.9308153,0.00038669098],"about_ca_topic_score_codex":0.00006439926,"about_ca_topic_score_gemma":0.00001529184,"teacher_disagreement_score":0.861533,"about_ca_system_score_codex":0.000040999417,"about_ca_system_score_gemma":0.000034605786,"threshold_uncertainty_score":0.9998224},"labels":[],"label_agreement":null},{"id":"W2985389220","doi":"10.3390/v11111028","title":"Aptamer Profiling of A549 Cells Infected with Low-Pathogenicity and High-Pathogenicity Influenza Viruses","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada","keywords":"Biology; Influenza A virus subtype H5N1; Pathogenicity; Virology; Microbiology; Influenza A virus; Proteome; Pandemic; Immune system; A549 cell; Strain (injury); Virus; Immunology; Cell culture; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Genetics; Medicine; Disease","score_opus":0.04480271046878643,"score_gpt":0.32910718739658823,"score_spread":0.2843044769278018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2985389220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962077,0.0012851233,0.000047938935,0.000020790352,0.00010251545,0.0013742323,0.00019740114,0.0001506685,0.0006136324],"genre_scores_gemma":[0.9944443,0.00029846604,0.0027039438,0.0022440061,0.0001024059,0.000059565995,0.0000063254556,0.00007396241,0.00006704312],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99723905,0.00014747158,0.00059205823,0.0006108118,0.00077743706,0.00063317537],"domain_scores_gemma":[0.9979737,0.00035593685,0.0002708316,0.00068949827,0.00047718655,0.00023283869],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042460812,0.00041741805,0.0009047259,0.0003343287,0.00013514364,0.00003724146,0.00018026445,0.00018477054,0.00021443969],"category_scores_gemma":[0.0004101693,0.00030837682,0.00011509466,0.00057597744,0.00052181137,0.00033239793,0.0003028439,0.0004549514,0.0002063779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012791443,0.00020190897,0.37467405,0.0004920638,0.00026141867,0.000024252073,0.00023747566,0.000046516423,0.6220837,0.00018768001,0.000049343656,0.0004624242],"study_design_scores_gemma":[0.0035011307,0.0010207526,0.15349601,0.0003614365,0.00018901109,0.000016616235,0.00019854862,0.00008411655,0.8386832,0.0000311625,0.0020609999,0.00035700543],"about_ca_topic_score_codex":0.00069143716,"about_ca_topic_score_gemma":0.0000560839,"teacher_disagreement_score":0.22117803,"about_ca_system_score_codex":0.000082274164,"about_ca_system_score_gemma":0.0002493582,"threshold_uncertainty_score":0.9999368},"labels":[],"label_agreement":null},{"id":"W2987388410","doi":"10.3390/v11111054","title":"Delmarva (DMV/1639) Infectious Bronchitis Virus (IBV) Variants Isolated in Eastern Canada Show Evidence of Recombination","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; University of Calgary","funders":"Egg Farmers of Canada; University of Guelph; University of Calgary","keywords":"Virology; Infectious bronchitis virus; Recombination; Biology; Avian infectious bronchitis virus; Virus; Genetics; Coronavirus disease 2019 (COVID-19); Medicine; Infectious disease (medical specialty); Gene; Internal medicine","score_opus":0.03419715185651392,"score_gpt":0.2432795651457307,"score_spread":0.20908241328921678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987388410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973929,0.00040470556,0.0000043599343,0.00014497302,0.0003326781,0.0002543252,0.00003644342,0.00004625894,0.0013833626],"genre_scores_gemma":[0.99918634,0.0002595707,0.00000858144,0.0002698771,0.000043805423,0.000014385681,0.0000043662485,0.0000017697079,0.00021132304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988237,0.00011104143,0.00031623436,0.000283105,0.00021551343,0.00025040828],"domain_scores_gemma":[0.99925035,0.00036898503,0.00015560532,0.0000741226,0.00010531264,0.000045617424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016598344,0.00015306078,0.0002471542,0.000033654516,0.0001017439,0.000027882086,0.00017997403,0.00008092142,0.000635853],"category_scores_gemma":[0.00018638541,0.00007526535,0.00004628609,0.0005368374,0.000043348908,0.00032227777,0.000104529594,0.00013141133,0.0000954759],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007307936,0.00011300646,0.73274654,0.000020162553,0.000027174528,0.0000051843103,0.00006475491,0.000039043345,0.25185952,0.00014728897,0.00045186636,0.014452383],"study_design_scores_gemma":[0.00022565594,0.00069293607,0.98569417,0.0002065728,0.00001355196,0.000008492314,0.00016137936,0.00031074678,0.008756202,0.00014644746,0.0035270387,0.0002568298],"about_ca_topic_score_codex":0.7287369,"about_ca_topic_score_gemma":0.92234766,"teacher_disagreement_score":0.2529476,"about_ca_system_score_codex":0.00014968244,"about_ca_system_score_gemma":0.000050583465,"threshold_uncertainty_score":0.6962144},"labels":[],"label_agreement":null},{"id":"W2989492122","doi":"10.3390/v11111012","title":"HIV-1 Envelope Glycoprotein Amino Acids Signatures Associated with Clade B Transmitted/Founder and Recent Viruses","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Institut National de Santé Publique du Québec; Université de Montréal","funders":"Islamic Development Bank; Fonds de Recherche du Québec - Santé; Université du Québec en Outaouais; Institut National de Santé Publique du Québec; Université de Montréal; Université de Sherbrooke","keywords":"Glycoprotein; Clade; Virology; Human immunodeficiency virus (HIV); Biology; Founder effect; Viral envelope; Amino acid; Genetics; Phylogenetics; Gene; Haplotype; Allele","score_opus":0.021461741274644928,"score_gpt":0.25683591738641076,"score_spread":0.23537417611176584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2989492122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99003047,0.0067132744,0.000038413407,0.00032790724,0.0001276034,0.0006520225,0.000291947,0.000132981,0.0016853868],"genre_scores_gemma":[0.9952502,0.00069054356,0.000059864855,0.0009117897,0.000016461343,0.00006988415,0.00028086134,0.000026680598,0.0026937155],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99848324,0.00024003912,0.00020348947,0.00042560967,0.00009762104,0.0005500139],"domain_scores_gemma":[0.9992768,0.0002451612,0.00007465295,0.00026860033,0.000072854964,0.00006190706],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011604678,0.0002742448,0.00033742536,0.0001244695,0.00018624304,0.000046272864,0.00016956663,0.00029542195,0.0024069012],"category_scores_gemma":[0.00007203788,0.00019021046,0.000045829653,0.00019068383,0.0002707571,0.00016202383,0.000052220425,0.0003858426,0.0017472977],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020414914,0.0007834885,0.2226768,0.00004900614,0.002072361,0.000077766286,0.0008577612,0.000007746396,0.74724746,0.0006192905,0.008191673,0.015375142],"study_design_scores_gemma":[0.0069250343,0.0015390227,0.25189102,0.00015727413,0.000115553004,0.00003697513,0.00023145764,8.3860004e-7,0.31779703,0.00018909236,0.42056376,0.0005529515],"about_ca_topic_score_codex":0.00015692224,"about_ca_topic_score_gemma":0.00015249863,"teacher_disagreement_score":0.42945045,"about_ca_system_score_codex":0.00007762996,"about_ca_system_score_gemma":0.00012334573,"threshold_uncertainty_score":0.99902993},"labels":[],"label_agreement":null},{"id":"W2989810596","doi":"10.3390/v11121105","title":"Yersinia Phages and Food Safety","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Jane ja Aatos Erkon Säätiö; Academy of Finland; Helsingin Yliopisto","keywords":"Yersinia enterocolitica; Yersinia; Yersiniosis; Biology; Reactive arthritis; Microbiology; Pathogenic bacteria; Bacteria; Food safety; Enterobacteriaceae; Food science; Escherichia coli; Arthritis; Immunology","score_opus":0.08627275925333903,"score_gpt":0.3791812627007959,"score_spread":0.29290850344745684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2989810596","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012187702,0.99628365,0.000009569297,0.000009754584,0.00020005195,0.00053891155,0.0004899959,0.00001772756,0.0012315727],"genre_scores_gemma":[0.00020333959,0.9978976,0.00009895098,0.000114417526,0.00030431588,0.000027238808,0.00042743358,0.00007643294,0.000850259],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99832237,0.00017635501,0.0003229348,0.0006341711,0.00016805042,0.00037613095],"domain_scores_gemma":[0.99898857,0.00008220901,0.00014461149,0.00061356265,0.000046027697,0.00012500625],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018146916,0.00038151155,0.00082984497,0.00012366171,0.0000732725,0.000072573996,0.00034879433,0.00047482335,0.00008393978],"category_scores_gemma":[0.00011476221,0.00032499823,0.00022222595,0.00012941367,0.00012246122,0.000005768082,0.00034835763,0.00025167683,0.00031085446],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084210886,0.00010384843,0.00035340336,0.014346615,0.00092911976,0.0000138448495,0.000021590999,3.683087e-7,0.006255653,0.000051248502,0.011487442,0.96635264],"study_design_scores_gemma":[0.00020067686,0.00034544343,0.000067886875,0.00081546296,0.0001767609,0.000056283934,0.000004641004,2.9283285e-7,0.0007027359,0.0000013589583,0.9972817,0.0003467654],"about_ca_topic_score_codex":0.00000885726,"about_ca_topic_score_gemma":0.000011323245,"teacher_disagreement_score":0.98579425,"about_ca_system_score_codex":0.000028753408,"about_ca_system_score_gemma":0.0002637658,"threshold_uncertainty_score":0.9999202},"labels":[],"label_agreement":null},{"id":"W2993026001","doi":"10.3390/v11121119","title":"A Comparative Analysis of Factors Influencing Two Outbreaks of Middle Eastern Respiratory Syndrome (MERS) in Saudi Arabia and South Korea","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Canadian Institutes of Health Research","keywords":"Outbreak; Case fatality rate; Middle East respiratory syndrome; Public health; Transmission (telecommunications); Middle East respiratory syndrome coronavirus; Health care; Epidemiology; Environmental health; Medicine; Geography; Socioeconomics; Disease; Virology; Coronavirus disease 2019 (COVID-19); Economic growth; Infectious disease (medical specialty); Pathology","score_opus":0.5639408510860585,"score_gpt":0.4772380901849536,"score_spread":0.0867027609011049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2993026001","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35099646,0.6478591,0.000019736308,0.0000012716251,0.000030318806,0.00058087835,0.00036584673,0.000022862247,0.00012351549],"genre_scores_gemma":[0.21499778,0.7840911,0.00040143868,0.00020187585,0.000030204992,0.00011007879,0.000026159496,0.000071820716,0.00006952421],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962665,0.0007163028,0.0018134648,0.00058093644,0.00030538146,0.00031745996],"domain_scores_gemma":[0.9907823,0.006525136,0.0019398368,0.0005873573,0.00008972892,0.000075636315],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008967936,0.00055672944,0.0070739915,0.0008982441,0.000037669757,0.000012115792,0.0003439443,0.00027131377,0.000035926747],"category_scores_gemma":[0.0020048432,0.000378884,0.0007027294,0.0012008642,0.0002967256,0.000081544364,0.00038804172,0.00036823552,0.0000122365645],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007531141,0.000509158,0.8514426,0.09029228,0.01987268,0.000039313894,0.018832672,0.00018294399,0.00002911676,0.0015709499,0.000097235876,0.017055774],"study_design_scores_gemma":[0.0052498193,0.0025077763,0.2806701,0.16847095,0.1407675,0.000017715378,0.016930506,0.00042273034,0.00015868516,0.0064815367,0.36956418,0.008758509],"about_ca_topic_score_codex":0.00112602,"about_ca_topic_score_gemma":0.0006471649,"teacher_disagreement_score":0.57077247,"about_ca_system_score_codex":0.00015965007,"about_ca_system_score_gemma":0.00012667564,"threshold_uncertainty_score":0.9998663},"labels":[],"label_agreement":null},{"id":"W2994202755","doi":"10.3390/v12010017","title":"Herpesviruses and the Unfolded Protein Response","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beatrice Hunter Cancer Research Institute; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Unfolded protein response; Computational biology; Virology; Biology; Genetics; Endoplasmic reticulum","score_opus":0.04167938896411421,"score_gpt":0.3301084869487741,"score_spread":0.2884290979846599,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994202755","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034498347,0.9947754,0.000004523553,0.000029189689,0.00010420225,0.0010930788,0.00014966048,0.00001534739,0.00037876255],"genre_scores_gemma":[0.0004136692,0.9974925,0.000029913399,0.00034360908,0.0001600531,0.00029279335,0.000047615682,0.00005299774,0.0011668463],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99832946,0.0005624913,0.00031351912,0.0004430604,0.00013061677,0.00022083618],"domain_scores_gemma":[0.99885625,0.00014936071,0.00020216656,0.0006785633,0.00002758412,0.00008606553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003015756,0.00034692264,0.00071462855,0.0000461856,0.00008442522,0.00007732828,0.00029679548,0.00025874632,0.000026755648],"category_scores_gemma":[0.0004009378,0.00019411516,0.00031074832,0.00007691858,0.0002871078,0.0000030518518,0.00024084961,0.00014630714,0.00009063879],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042180163,0.00013703633,0.000024606823,0.013473308,0.0009152746,0.000041549403,0.00004325571,0.0000016533318,0.0015700668,0.0018800467,0.009177188,0.968518],"study_design_scores_gemma":[0.0007259991,0.00006719234,0.0000023090024,0.0014045555,0.00034942938,0.000018923514,0.000010259933,5.636526e-7,0.0004408215,0.000033820128,0.9966826,0.00026354153],"about_ca_topic_score_codex":0.000026493639,"about_ca_topic_score_gemma":0.000004410331,"teacher_disagreement_score":0.9875054,"about_ca_system_score_codex":0.000008705909,"about_ca_system_score_gemma":0.00026452684,"threshold_uncertainty_score":0.79157865},"labels":[],"label_agreement":null},{"id":"W2995320334","doi":"10.3390/v12010019","title":"Loop-Mediated Isothermal Amplification (LAMP) for the Diagnosis of Zika Virus: A Review","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco; International Development Research Centre","keywords":"Zika virus; Loop-mediated isothermal amplification; Reverse Transcription Loop-mediated Isothermal Amplification; Point-of-care testing; Virology; Outbreak; Gold standard (test); Medicine; Biology; Virus; Computational biology; Reverse transcriptase; Polymerase chain reaction; Immunology; Genetics; Internal medicine","score_opus":0.13992078053200283,"score_gpt":0.40432762879107276,"score_spread":0.2644068482590699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995320334","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000004421917,0.9915684,0.000095171876,0.0002876925,0.00023834697,0.006459101,0.0012046482,0.000047085276,0.00009515244],"genre_scores_gemma":[0.0000077909235,0.9909062,0.000025835037,0.0037543878,0.00038393875,0.004072345,0.00043198286,0.000096558644,0.00032100445],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99789387,0.00013042382,0.0009377884,0.00043786367,0.0003159757,0.00028410132],"domain_scores_gemma":[0.9961945,0.001583679,0.0008113019,0.0011078989,0.00019353504,0.000109088876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003728009,0.0004065537,0.0023102006,0.000098667915,0.000057438243,0.000020945077,0.0003819554,0.0002093491,0.0007075978],"category_scores_gemma":[0.0008483803,0.00022993544,0.0012000205,0.00032870227,0.00007840211,0.00005697724,0.000047671158,0.00020105246,0.00031951885],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005549793,0.00018766524,0.00004468606,0.11685187,0.00059912185,0.0000014455424,0.000007586562,9.398268e-8,0.000007143546,0.00018799774,0.019338088,0.8627188],"study_design_scores_gemma":[0.0005121137,0.000143002,0.000044604752,0.05586405,0.011047737,0.000004536162,0.000006293109,0.000009922154,0.00000786586,0.0000039530723,0.93215054,0.000205356],"about_ca_topic_score_codex":0.00007096053,"about_ca_topic_score_gemma":0.000007077878,"teacher_disagreement_score":0.9128125,"about_ca_system_score_codex":0.000052352934,"about_ca_system_score_gemma":0.0004364214,"threshold_uncertainty_score":0.9376495},"labels":[],"label_agreement":null},{"id":"W2995682824","doi":"10.3390/v11121144","title":"Feline Infectious Peritonitis as a Systemic Inflammatory Disease: Contribution of Liver and Heart to the Pathogenesis","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Universität Zürich; Deutsche Forschungsgemeinschaft; University of Glasgow; Wellcome Trust","keywords":"Feline infectious peritonitis; Pathogenesis; Immunology; Immune system; Medicine; Serositis; Inflammation; Cytokine; CATS; Proinflammatory cytokine; Disease; Infectious disease (medical specialty); Pathology; Arthritis; Internal medicine","score_opus":0.01260397090375978,"score_gpt":0.22350880946421767,"score_spread":0.21090483856045789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995682824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969886,0.0021078056,0.0000015294313,0.000265398,0.00008751126,0.00035303883,0.00008798563,0.000045455756,0.000062708095],"genre_scores_gemma":[0.99901646,0.00036421485,0.0000029543635,0.000399075,0.00013200784,0.000040251296,0.0000031525271,8.2076076e-7,0.00004108058],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994251,0.000071969596,0.00013195656,0.00014586604,0.00010758364,0.00011749355],"domain_scores_gemma":[0.99960333,0.00015007242,0.00004752219,0.000048356374,0.00009721222,0.000053512525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000120291406,0.000083040635,0.00012933105,0.000011231673,0.00018444688,0.000023810955,0.000059506732,0.000031551088,0.00010579162],"category_scores_gemma":[0.00012511437,0.000029276442,0.000044654644,0.00015350447,0.000051634688,0.00006783928,0.00008692215,0.000037765534,0.00022392356],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042410236,0.000024755662,0.46922043,0.000014522559,0.000015701902,0.000001662448,0.000047463334,0.00000792836,0.52718925,0.00045750765,0.00021222938,0.0027661407],"study_design_scores_gemma":[0.00006147248,0.00022364581,0.9647037,0.000044831486,0.000019102301,0.000016088694,0.00013182992,0.000009365027,0.0025545873,0.00002662148,0.032124713,0.00008403475],"about_ca_topic_score_codex":0.0006920696,"about_ca_topic_score_gemma":0.00060076674,"teacher_disagreement_score":0.52463466,"about_ca_system_score_codex":0.000018091232,"about_ca_system_score_gemma":0.0000072609646,"threshold_uncertainty_score":0.2878159},"labels":[],"label_agreement":null},{"id":"W2995936855","doi":"10.3390/v12010014","title":"Human Coronaviruses and Other Respiratory Viruses: Underestimated Opportunistic Pathogens of the Central Nervous System?","year":2019,"lang":"en","type":"review","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":1069,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Université de Sherbrooke; Institut National de la Recherche Scientifique","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research","keywords":"Biology; Immunology; Rhinovirus; Coronavirus; Pneumonia; Respiratory tract; Immune system; Respiratory system; Respiratory tract infections; Virus; Virology; Disease; Medicine; Infectious disease (medical specialty); Pathology; Coronavirus disease 2019 (COVID-19)","score_opus":0.36964155533056164,"score_gpt":0.46170764384431745,"score_spread":0.0920660885137558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995936855","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0044979504,0.98844814,0.000009577701,0.000002619106,0.0004610423,0.0030702082,0.0010075438,0.00019296564,0.0023099605],"genre_scores_gemma":[0.005720772,0.9845795,0.000081337676,0.005721919,0.0010425018,0.0006290025,0.000047344598,0.0009844067,0.0011932087],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956947,0.0008609268,0.0013711118,0.00071171724,0.00072119123,0.0006403342],"domain_scores_gemma":[0.99673784,0.0003122879,0.0008349622,0.0016254969,0.00017817013,0.00031122848],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00054135645,0.0006785803,0.0023309146,0.00047438187,0.00029617653,0.00009127785,0.0004954313,0.00055904716,0.0002401],"category_scores_gemma":[0.00035797828,0.0004289677,0.00054717326,0.000676196,0.00071339536,0.00011390578,0.0003622861,0.0007792453,0.00019664488],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027987096,0.0016075098,0.05072799,0.39040804,0.0049630483,0.0008107945,0.00023833531,0.000018128636,0.01087437,0.021649648,0.01145053,0.5069717],"study_design_scores_gemma":[0.00049957546,0.00043677023,0.0011253819,0.018709797,0.0019104491,0.00016557267,0.000049614067,0.0000042979445,0.00009160668,0.00000600271,0.9766105,0.00039044875],"about_ca_topic_score_codex":0.0005074428,"about_ca_topic_score_gemma":0.00006352474,"teacher_disagreement_score":0.96515995,"about_ca_system_score_codex":0.00044899873,"about_ca_system_score_gemma":0.0014328498,"threshold_uncertainty_score":0.99981624},"labels":[],"label_agreement":null},{"id":"W2997853549","doi":"10.3390/v12010065","title":"H7N9 Influenza Virus Containing a Polybasic HA Cleavage Site Requires Minimal Host Adaptation to Obtain a Highly Pathogenic Disease Phenotype in Mice","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Canadian Food Inspection Agency; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Virulence; Influenza A virus subtype H5N1; Biology; Virus; Virology; Host adaptation; Phenotype; Reverse genetics; Influenza A virus; Hemagglutinin (influenza); Host (biology); Microbiology; Gene; Genetics; Mutant","score_opus":0.1257593595746315,"score_gpt":0.36433281727913974,"score_spread":0.23857345770450825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997853549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99096686,0.004248293,0.00009293663,0.0024878,0.00007746908,0.001220145,0.00032860457,0.00023027012,0.00034761516],"genre_scores_gemma":[0.9629236,0.00014968544,0.0009902758,0.035242826,0.0003639675,0.00019046717,0.000021602658,0.00008171743,0.00003586914],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99676937,0.00023544747,0.00069412874,0.000728426,0.0007552422,0.00081740244],"domain_scores_gemma":[0.99810815,0.0003728094,0.00015019903,0.0003754468,0.00018067485,0.0008127361],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037883903,0.000400264,0.000623705,0.0003984928,0.00018643469,0.000086640546,0.00024342522,0.00009387998,0.00007688996],"category_scores_gemma":[0.0038246007,0.0003809275,0.0001439091,0.0010065471,0.0001587385,0.0004589347,0.000311222,0.00042550763,0.00090943894],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.022126207,0.00038189918,0.13249274,0.00043745918,0.0002312706,0.0015529641,0.019576369,0.0002590743,0.814887,0.00036221926,0.0028197628,0.0048730513],"study_design_scores_gemma":[0.012855722,0.0045880796,0.83365065,0.0012112126,0.0004732499,0.000011256918,0.0076142782,0.0031414821,0.05099249,0.00008539072,0.08376112,0.0016150961],"about_ca_topic_score_codex":0.0015123629,"about_ca_topic_score_gemma":0.00062152854,"teacher_disagreement_score":0.7638945,"about_ca_system_score_codex":0.0002553057,"about_ca_system_score_gemma":0.00041738365,"threshold_uncertainty_score":0.99986845},"labels":[],"label_agreement":null},{"id":"W2997957206","doi":"10.3390/v12010028","title":"Characterization of the Role of Host Cellular Factor Histone Deacetylase 10 during HIV-1 Replication","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research; National Institutes of Health; Manitoba Health Research Council","keywords":"HDAC10; Histone deacetylase; Histone; Biology; Cancer research; Genetics; Gene","score_opus":0.011818357994715359,"score_gpt":0.24528251494499262,"score_spread":0.23346415695027725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997957206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99861026,0.00050224725,0.0000042980523,0.000029704663,0.000056417713,0.00022806908,0.0002985599,0.000011946221,0.00025850986],"genre_scores_gemma":[0.9968114,0.00003727069,0.0000035720163,0.000008489722,0.0000055296136,0.000011010534,0.00012890997,0.000006304083,0.0029875156],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953914,0.000064651154,0.00013659363,0.0001268505,0.000030154675,0.00010264206],"domain_scores_gemma":[0.9994236,0.000023061253,0.00011468519,0.0003889876,0.000041358697,0.000008255276],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000037660364,0.00005735768,0.000107017804,0.000038281356,0.000042277454,0.000002002777,0.000108723725,0.00005792672,0.0011348315],"category_scores_gemma":[0.000029058489,0.000039520535,0.00004171786,0.00006330464,0.00006196764,0.000051026367,0.000044550863,0.000052703563,0.0010222425],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008234787,0.000094537,0.03534313,0.000017481352,0.0000425022,1.29527e-7,0.00015132544,2.2831448e-7,0.9636148,0.00005704522,0.00001381586,0.0005826259],"study_design_scores_gemma":[0.00033979528,0.000044814107,0.17484209,0.000013018138,0.000006887225,9.496825e-7,0.000020383506,4.2716954e-7,0.8145062,0.0000023866735,0.010194394,0.000028657152],"about_ca_topic_score_codex":0.00006394384,"about_ca_topic_score_gemma":0.0000032304285,"teacher_disagreement_score":0.14910863,"about_ca_system_score_codex":0.000025222369,"about_ca_system_score_gemma":0.000027598471,"threshold_uncertainty_score":0.9997783},"labels":[],"label_agreement":null},{"id":"W2998235022","doi":"10.3390/v12010064","title":"A Chimeric Sudan Virus-Like Particle Vaccine Candidate Produced by a Recombinant Baculovirus System Induces Specific Immune Responses in Mice and Horses","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Virus-like particle; Virology; VP40; Immunogenicity; Ebola virus; Virus; Antibody; Immune system; Adjuvant; Neutralizing antibody; Biology; Immunization; Vaccination; Recombinant DNA; Immunology","score_opus":0.04148966576230379,"score_gpt":0.30268380007682893,"score_spread":0.26119413431452515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998235022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900079,0.0069319713,0.000007045434,0.001934584,0.00014849957,0.00067731703,0.000050240207,0.00014171201,0.000100753976],"genre_scores_gemma":[0.99696106,0.001968126,0.000043366967,0.0005534284,0.000117607626,0.00008258051,0.0000122462325,0.000043848548,0.00021773312],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980071,0.00024164688,0.0004890523,0.00053960556,0.00026181742,0.0004607854],"domain_scores_gemma":[0.9991558,0.000118351745,0.00009953992,0.00026395873,0.000070383765,0.00029196165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036401788,0.0002478253,0.00052110845,0.00018268128,0.00015958167,0.000092972536,0.00011322363,0.000087953194,0.000108349166],"category_scores_gemma":[0.00018476977,0.00019796086,0.000064925174,0.0009336161,0.00007561401,0.0002326232,0.000119289165,0.00033270437,0.00014179603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018579283,0.00023309793,0.01580671,0.00016891885,0.000060647508,0.00012034144,0.0005597673,0.0000010000572,0.9750122,0.000031159205,0.0027214657,0.0034267616],"study_design_scores_gemma":[0.003102063,0.0011430236,0.046181742,0.0002731881,0.0000575441,0.00010256014,0.0010455477,0.00026603622,0.91344386,0.0000026710918,0.034063183,0.00031858933],"about_ca_topic_score_codex":0.0045688264,"about_ca_topic_score_gemma":0.00020945269,"teacher_disagreement_score":0.06156835,"about_ca_system_score_codex":0.000095789066,"about_ca_system_score_gemma":0.00010511709,"threshold_uncertainty_score":0.807261},"labels":[],"label_agreement":null},{"id":"W2998849726","doi":"10.3390/v12010077","title":"The RNA-Dependent RNA Polymerase NIb of Potyviruses Plays Multifunctional, Contrasting Roles during Viral Infection","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Central Public-interest Scientific Institution Basal Research Fund for Chinese Academy of Tropical Agricultural Sciences; Chinese Academy of Tropical Agricultural Sciences; Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Natural Science Foundation of Hainan Province","keywords":"Biology; RNA-dependent RNA polymerase; Viral replication; Virology; Potyvirus; RNA; Virus; Tobacco etch virus; Cucumber mosaic virus; Mycovirus; Plant virus; RNA interference; RNA virus; Polymerase; Viral evolution; Picornavirus; RNA polymerase; Genetics; Gene","score_opus":0.08151035680088017,"score_gpt":0.31469565501367125,"score_spread":0.23318529821279108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998849726","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019313036,0.9774312,7.804032e-7,0.00007232305,0.0002791247,0.00061832555,0.0019828987,0.00012930583,0.00017300372],"genre_scores_gemma":[0.0053404854,0.99346244,0.0000043904347,0.00005589971,0.0008152893,0.00013453809,0.00007385116,0.000006120863,0.00010698259],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99709284,0.00039725963,0.00078541547,0.0005204797,0.0006667546,0.0005372302],"domain_scores_gemma":[0.99677956,0.0022716292,0.00059571664,0.00010751674,0.000097743665,0.00014781466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034240066,0.00048509365,0.0010952826,0.000049409347,0.0010324769,0.00017877712,0.0004964615,0.00020308727,0.00010499707],"category_scores_gemma":[0.00090369454,0.00015952958,0.0004657196,0.00042361076,0.00022763398,0.00021583533,0.00040693596,0.0005310002,0.00011592147],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009798736,0.00008766149,0.00011967834,0.00091080007,0.00045741096,0.000030747855,0.000024429015,0.0000028818476,0.08552837,0.000052539326,0.0005829102,0.9121046],"study_design_scores_gemma":[0.00017717204,0.0001791382,0.0009100126,0.0021132973,0.00024547958,0.000027020431,0.000068957466,0.000006527499,0.011448408,0.000017212456,0.98435086,0.00045593645],"about_ca_topic_score_codex":0.0012348823,"about_ca_topic_score_gemma":0.0011064784,"teacher_disagreement_score":0.9837679,"about_ca_system_score_codex":0.000097810305,"about_ca_system_score_gemma":0.00006597137,"threshold_uncertainty_score":0.7941082},"labels":[],"label_agreement":null},{"id":"W3000017686","doi":"10.3390/v12010108","title":"In Vitro Hepatitis C Virus Infection and Hepatic Choline Metabolism","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; Institute of Infection and Immunity; Carleton University; Ottawa Hospital; University of Alberta; University of Ottawa","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science; Canadian Liver Foundation","keywords":"Choline; Phosphatidylcholine; Biology; Fetal bovine serum; Metabolism; Hepatitis C virus; Virus; Viral replication; Phospholipid; In vitro; Biochemistry; Virology","score_opus":0.02774768975672007,"score_gpt":0.2838419869136173,"score_spread":0.2560942971568972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000017686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99586135,0.0022723668,0.000009071358,0.0013138612,0.000069090114,0.00023734516,0.000045899244,0.000042168256,0.00014882446],"genre_scores_gemma":[0.98418933,0.006146878,0.00011037266,0.009294614,0.00016551965,0.000053267162,0.000017382905,0.00001247391,0.000010145519],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994519,0.000026169837,0.00013413467,0.0001761928,0.00010320258,0.00010844612],"domain_scores_gemma":[0.99968535,0.000032222644,0.000028753619,0.00008259857,0.000018337907,0.00015275642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000025832414,0.00009902868,0.00021370381,0.00005762864,0.000024775181,0.000015467862,0.000015560583,0.000031475713,0.00014517944],"category_scores_gemma":[0.000061666055,0.000081312595,0.00003987671,0.00013734259,0.000022978851,0.00013632735,0.00002370507,0.000061677165,0.0000811343],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031762096,0.00055128953,0.94735354,0.00010647491,0.00012914288,0.0002004528,0.00044269988,0.0000032498265,0.041773055,0.00010783281,0.000944167,0.008070503],"study_design_scores_gemma":[0.0017906557,0.00012214616,0.84635264,0.000029593819,0.00022008078,0.000005674142,0.0000050619815,0.00020873867,0.13834482,0.000051275594,0.012778904,0.00009038553],"about_ca_topic_score_codex":0.006410849,"about_ca_topic_score_gemma":0.00018728377,"teacher_disagreement_score":0.10100085,"about_ca_system_score_codex":0.0000241847,"about_ca_system_score_gemma":0.00002302857,"threshold_uncertainty_score":0.96913284},"labels":[],"label_agreement":null},{"id":"W3000395518","doi":"10.3390/v12010115","title":"Population- and Variant-Based Genome Analyses of Viruses from Vaccine-Derived Rabies Cases Demonstrate Product Specific Clusters and Unique Patterns","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Rabies; Rabies virus; Virology; Biology; Rabies vaccine; Population; Genetic diversity; Vaccination; Lyssavirus; Rhabdoviridae; Medicine; Environmental health","score_opus":0.07179370252186941,"score_gpt":0.29250260590759936,"score_spread":0.22070890338572996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000395518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853865,0.011941351,0.0010315379,0.0008106333,0.000121316516,0.00025768246,0.00036415458,0.00007477002,0.000012041493],"genre_scores_gemma":[0.99640554,0.00076723343,0.00021355714,0.0023779825,0.00006362599,0.000016386373,0.00013061095,0.000018711202,0.000006329309],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982063,0.000549263,0.0004912653,0.0004826317,0.000027374343,0.00024313833],"domain_scores_gemma":[0.9984773,0.00093351,0.00026500592,0.00022775438,0.000048020174,0.000048409627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001522165,0.00025484987,0.0006422767,0.00009585419,0.00017725118,0.00001820331,0.00014095526,0.00017776918,0.0002493182],"category_scores_gemma":[0.0003238647,0.00021206701,0.00006851741,0.00010478412,0.00024522902,0.0001478853,0.000066461835,0.00019442213,0.000015901345],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006319256,0.000034072822,0.29280472,0.00002981323,0.00032821982,0.000018780363,0.0001837362,0.00011573989,0.7049679,0.000086619875,0.00012223546,0.0006762106],"study_design_scores_gemma":[0.0020168917,0.00030732222,0.7222231,0.000049722163,0.00026821447,0.00003695704,0.00037676116,0.000051361403,0.27260858,0.00021498432,0.0014884686,0.00035765144],"about_ca_topic_score_codex":0.0023075226,"about_ca_topic_score_gemma":0.00030524936,"teacher_disagreement_score":0.43235934,"about_ca_system_score_codex":0.00000889966,"about_ca_system_score_gemma":0.000032939446,"threshold_uncertainty_score":0.8647842},"labels":[],"label_agreement":null},{"id":"W3001290276","doi":"10.3390/v12020140","title":"Presence of Flavivirus Antibodies Does Not Lead to a Greater Number of Symptoms in a Small Cohort of Canadian Travelers Infected with Zika Virus","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Government of Canada; Health Sciences Centre; Hospital for Sick Children; Public Health Ontario; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Zika virus; Flavivirus; Viremia; Dengue virus; Virology; Dengue fever; Plaque reduction neutralization test; Serology; Medicine; Microcephaly; Virus; Immunology; Antibody; Biology; Neutralizing antibody; Pediatrics","score_opus":0.023662895597597346,"score_gpt":0.2642343868496322,"score_spread":0.24057149125203484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3001290276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979757,0.00010861036,0.000010692599,0.00038304174,0.00003014737,0.0006441077,0.0003621195,0.000018204002,0.00046736715],"genre_scores_gemma":[0.9982724,0.000067459434,0.00012794568,0.0013699124,0.00004218848,0.00003645339,0.0000073926753,0.000024283045,0.00005191622],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99875635,0.000044193843,0.0004077997,0.0002832626,0.00022243262,0.00028598306],"domain_scores_gemma":[0.99906313,0.00006492886,0.00012586589,0.0002760732,0.00016442697,0.00030554525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006952292,0.00018414362,0.0006387532,0.00027270155,0.000015926602,0.000007152642,0.0001385897,0.00006817318,0.00016830405],"category_scores_gemma":[0.00017062509,0.00012632148,0.000085728265,0.000594486,0.00014047486,0.00006089937,0.000030445246,0.000094748066,0.00001059972],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015387838,0.00009462983,0.8464396,0.00025510506,0.00021413069,0.000059155904,0.001254946,0.000026211645,0.14921659,0.00008855173,0.00009539246,0.000716894],"study_design_scores_gemma":[0.0015663338,0.00047902172,0.7695439,0.00034971407,0.00023196716,0.0000036985905,0.00022021824,0.00009859805,0.22699319,0.000004370291,0.00035666823,0.00015233309],"about_ca_topic_score_codex":0.24797966,"about_ca_topic_score_gemma":0.16065726,"teacher_disagreement_score":0.0873224,"about_ca_system_score_codex":0.000026278936,"about_ca_system_score_gemma":0.00030957515,"threshold_uncertainty_score":0.85465854},"labels":[],"label_agreement":null},{"id":"W3003403028","doi":"10.3390/v12020150","title":"Genomic Characterization, Formulation and Efficacy in Planta of a Siphoviridae and Podoviridae Protection Cocktail against the Bacterial Plant Pathogens Pectobacterium spp.","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agri-Food and Biosciences Institute; Queen's University Belfast; Queen's University; Department of Agriculture, Environment and Rural Affairs, UK Government","keywords":"Siphoviridae; Podoviridae; Biology; Phage therapy; Microbiology; Population; Biotechnology; Bacteriophage; Genetics; Medicine; Environmental health; Gene","score_opus":0.02192264268708916,"score_gpt":0.21494146980139314,"score_spread":0.193018827114304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003403028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985811,0.000013111382,0.000060615985,0.00040748215,0.000095039715,0.00045771225,0.00030393546,0.0000220322,0.000058976544],"genre_scores_gemma":[0.9991438,0.0001267651,0.00004099204,0.0004941554,0.00008197158,0.000016049778,0.00007449136,0.0000139321455,0.000007840606],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992226,0.000062129744,0.00026566564,0.00023654409,0.00006979558,0.00014326772],"domain_scores_gemma":[0.9996482,0.00003744089,0.00014551159,0.0001037755,0.000006098175,0.0000589754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007927895,0.0001293632,0.00015168556,0.000032921263,0.00011014138,0.00006016135,0.00008087977,0.00005610877,0.00022193282],"category_scores_gemma":[0.00003567864,0.000102190315,0.000024107565,0.00013040059,0.00008740386,0.00031699563,0.00012996084,0.000107961314,0.00003326921],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020513257,0.00004262241,0.0091453,0.000014034038,0.00000745729,0.0000023045532,0.0008102541,0.000024572939,0.9870051,0.0000059690706,0.000029289778,0.0027079715],"study_design_scores_gemma":[0.00049647246,0.000091355476,0.9468028,0.000022148073,0.000013476818,0.000017146196,0.00005679634,0.00045335665,0.043920208,0.0000023052428,0.0080050705,0.000118899356],"about_ca_topic_score_codex":0.0003567105,"about_ca_topic_score_gemma":0.00024398099,"teacher_disagreement_score":0.9430849,"about_ca_system_score_codex":0.000040056846,"about_ca_system_score_gemma":0.0000098830815,"threshold_uncertainty_score":0.41672003},"labels":[],"label_agreement":null},{"id":"W3003807069","doi":"10.3390/v12020171","title":"Estimating the Risk of Human Herpesvirus 6 and Cytomegalovirus Transmission to Ugandan Infants from Viral Shedding in Saliva by Household Contacts","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; BC Children's Hospital; Center for AIDS Research, University of Washington; University of Washington","keywords":"Transmission (telecommunications); Viral shedding; Cytomegalovirus; Saliva; Breastfeeding; Human cytomegalovirus; Medicine; Viral load; Virology; Cohort; Immunology; Virus; Pediatrics; Herpesviridae; Viral disease; Internal medicine","score_opus":0.04260175890811845,"score_gpt":0.3198571352034136,"score_spread":0.2772553762952951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003807069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556106,0.0015912271,0.00033034763,0.0008977294,0.00004076739,0.00073755643,0.00037259804,0.00008527815,0.00038344125],"genre_scores_gemma":[0.99547786,0.00022914086,0.0011322589,0.0028322325,0.00019032111,0.000027900585,0.000018434426,0.00006808782,0.000023770986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975019,0.00018529528,0.00069102517,0.0005532768,0.0005816354,0.00048687676],"domain_scores_gemma":[0.9985387,0.00037888216,0.00017279318,0.00036246952,0.00004967529,0.0004974819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048754702,0.00031352634,0.00070492004,0.00018988097,0.00023322731,0.000097917895,0.00027966447,0.00016051182,0.00019280227],"category_scores_gemma":[0.00036498567,0.00022661635,0.00010779279,0.00051353563,0.00015693727,0.00023829499,0.00016420792,0.0006607329,0.000030986183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015354998,0.00017088887,0.15568064,0.00012299948,0.00013712872,0.00006439531,0.0048919832,0.00014410436,0.80484295,0.000036786543,0.002215608,0.03015704],"study_design_scores_gemma":[0.01049686,0.0023459408,0.25429624,0.0013417745,0.00036748874,0.000013704153,0.0008710028,0.008615274,0.65922934,0.00034301408,0.06105577,0.0010235992],"about_ca_topic_score_codex":0.012511298,"about_ca_topic_score_gemma":0.00033660734,"teacher_disagreement_score":0.1456136,"about_ca_system_score_codex":0.000069100664,"about_ca_system_score_gemma":0.000092841474,"threshold_uncertainty_score":0.99406445},"labels":[],"label_agreement":null},{"id":"W3004188348","doi":"10.3390/v12020161","title":"Differential Features of Fusion Activation within the Paramyxoviridae","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Queen's University; University of Oxford","keywords":"Glycoprotein; Biology; Sequence (biology); Lipid bilayer fusion; Cell biology; Biophysics; Genetics; Membrane","score_opus":0.07340647339152355,"score_gpt":0.3670911165049866,"score_spread":0.29368464311346304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004188348","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011323739,0.9974769,0.000012101105,0.00015835345,0.00019863156,0.00062141713,0.000071498784,0.000048527767,0.00028019524],"genre_scores_gemma":[0.0052559464,0.9932913,0.000013112364,0.00071763434,0.0003993445,0.00004437565,0.0001311901,0.000029990199,0.00011711177],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99894595,0.00016605851,0.00034940775,0.00022930648,0.00019956745,0.000109703724],"domain_scores_gemma":[0.9991034,0.00016974796,0.00034209798,0.00029208456,0.000025799573,0.000066842236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004454461,0.00024630968,0.0009738643,0.000073818155,0.000075445045,0.000010145718,0.0001566046,0.00025192412,0.00020449192],"category_scores_gemma":[0.00025656566,0.00012438507,0.00035143684,0.00017683276,0.00014100244,0.000044130826,0.0000764586,0.00041483063,0.00006599729],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040502206,0.00019558443,0.00008055699,0.010139425,0.00051945576,0.000021179447,0.00009288685,2.4618924e-7,0.0005665964,0.0010123664,0.006089475,0.9808772],"study_design_scores_gemma":[0.0002880346,0.00025215093,0.0022447186,0.005631425,0.0025702019,0.000020327476,0.000016326121,0.0000014688268,0.0006072915,0.00006083773,0.98815525,0.00015195247],"about_ca_topic_score_codex":0.000025286688,"about_ca_topic_score_gemma":0.0000025644783,"teacher_disagreement_score":0.9820658,"about_ca_system_score_codex":0.000018229995,"about_ca_system_score_gemma":0.00019534206,"threshold_uncertainty_score":0.5072276},"labels":[],"label_agreement":null},{"id":"W3004347501","doi":"10.3390/v12020160","title":"Host Transcription Factors in Hepatitis B Virus RNA Synthesis","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary; University of Lethbridge","funders":"Alberta Innovates","keywords":"cccDNA; Hepatitis B virus; Virology; Transcription (linguistics); Minichromosome; Biology; Hepatocellular carcinoma; Hepatitis B virus PRE beta; Circular DNA; Viral replication; RNA; Duck hepatitis B virus; HBx; Virus; Gene; Genome; Hepadnaviridae; Hepatitis B virus DNA polymerase; Genetics; HBsAg","score_opus":0.10862229521168593,"score_gpt":0.34404606152096306,"score_spread":0.23542376630927714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004347501","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012284039,0.99503964,0.000008667475,0.00007620893,0.00044234673,0.0012394298,0.0008583023,0.0005090734,0.0005979458],"genre_scores_gemma":[0.0013900631,0.99701023,0.00009754427,0.0003918331,0.0003163629,0.00039359872,0.0000488039,0.0002975056,0.00005407656],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99705493,0.00027035622,0.0010356425,0.0006935758,0.00046464763,0.00048086193],"domain_scores_gemma":[0.99846363,0.00053776184,0.0002783665,0.0004408089,0.00005127096,0.00022817463],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015051747,0.00074799586,0.0035168114,0.00051434664,0.00009118123,0.000040835763,0.00022780066,0.00044571824,0.00025755682],"category_scores_gemma":[0.0009960945,0.0006008473,0.00068985566,0.0007437126,0.00012455594,0.00016277624,0.00007305743,0.00068407395,0.0010770848],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031051048,0.00022404316,0.010996615,0.020129545,0.0007089373,0.0006467075,0.0005936249,4.736887e-8,0.00022527498,0.000058729132,0.0024451192,0.9639403],"study_design_scores_gemma":[0.00017072586,0.00012210227,0.0028495388,0.01789196,0.0015605829,0.000016757824,0.000013253243,8.8716524e-7,0.0005683031,0.000004061995,0.976309,0.00049284863],"about_ca_topic_score_codex":0.016582185,"about_ca_topic_score_gemma":0.012200657,"teacher_disagreement_score":0.97386384,"about_ca_system_score_codex":0.0004915226,"about_ca_system_score_gemma":0.00035762505,"threshold_uncertainty_score":0.99970067},"labels":[],"label_agreement":null},{"id":"W3005350380","doi":"10.3390/v12020190","title":"Nanoscale Structure Determination of Murray Valley Encephalitis and Powassan Virus Non-Coding RNAs","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta; University of Lethbridge","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"RNA; Biology; Computational biology; Virus; Genome; Genetics; Virology; Gene","score_opus":0.020249951479012533,"score_gpt":0.2731853638818508,"score_spread":0.25293541240283823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005350380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963052,0.00095019606,0.0013548431,0.00046315993,0.000089698275,0.00025495072,0.000133731,0.000036612215,0.00041156777],"genre_scores_gemma":[0.99697,0.00014565083,0.00035897968,0.0022634226,0.00019001038,0.0000069964344,0.000011308739,0.000016039508,0.00003761574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992164,0.000024559491,0.00020399358,0.00021929826,0.00019235468,0.00014340872],"domain_scores_gemma":[0.9995007,0.00004476004,0.0000887268,0.00013498415,0.000058157544,0.00017270233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000034160323,0.00011869197,0.00025763805,0.0000419586,0.00004441986,0.000019358216,0.00006507924,0.000065161,0.00047953965],"category_scores_gemma":[0.00012057653,0.00010123546,0.000063400286,0.000102762155,0.00005399185,0.000105107814,0.000034064476,0.00007980446,0.000005845561],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026506564,0.00004956776,0.010376807,0.00025810194,0.000041640826,0.00004148713,0.0009679221,0.0000011687023,0.94361794,0.00018728187,0.00058673666,0.043606285],"study_design_scores_gemma":[0.004766574,0.001120276,0.1311559,0.00035469886,0.0005589403,0.000034886536,0.001185538,0.0037048592,0.83938694,0.00032896135,0.016966369,0.00043604276],"about_ca_topic_score_codex":0.00010027459,"about_ca_topic_score_gemma":0.000018988256,"teacher_disagreement_score":0.12077908,"about_ca_system_score_codex":0.000011405757,"about_ca_system_score_gemma":0.000043076932,"threshold_uncertainty_score":0.52506226},"labels":[],"label_agreement":null},{"id":"W3005889177","doi":"10.3390/v12020213","title":"Characterization of Adenovirus 5 E1A Exon 1 Deletion Mutants in the Viral Replicative Cycle","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Biology; Viral replication; Mutant; Gene; Genome; Virus; Viral life cycle; Exon; Virology; Genetics; Mutation; Viral structural protein; Molecular biology; Viral entry","score_opus":0.036603987110651916,"score_gpt":0.31137595527829204,"score_spread":0.2747719681676401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005889177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986528,0.00014988487,0.0001980035,0.0005241852,0.000017156843,0.00025289028,0.000059538175,0.000008318781,0.00013723088],"genre_scores_gemma":[0.99748284,0.00023223637,0.000023521836,0.001996019,0.00012546722,0.00003616695,0.00007927973,0.000015184879,0.000009276356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990998,0.00016711047,0.00018325062,0.00024120984,0.00016318486,0.00014548059],"domain_scores_gemma":[0.99954605,0.00001331195,0.00008528534,0.00027541447,0.0000457831,0.000034156354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001745118,0.00009096655,0.000100690704,0.00003209122,0.000034644945,0.000012792859,0.0002541738,0.00007109504,0.00003408533],"category_scores_gemma":[0.0000808675,0.00007284722,0.000037945894,0.00018551969,0.000066741464,0.000007527082,0.000053964653,0.00008491746,0.000023366298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010370393,0.00005357052,0.0014934955,0.000009189269,0.000013468574,0.000001869437,0.0002828175,0.000015037198,0.9926513,0.000026654287,0.000053243675,0.00436232],"study_design_scores_gemma":[0.00033494225,0.0013433051,0.008893684,0.0000062920712,0.0000041187523,8.446952e-7,0.000073505886,0.00007725351,0.98573864,0.000025081243,0.003421218,0.00008109185],"about_ca_topic_score_codex":0.000032414788,"about_ca_topic_score_gemma":0.00004800028,"teacher_disagreement_score":0.007400188,"about_ca_system_score_codex":0.000008406309,"about_ca_system_score_gemma":0.00004207579,"threshold_uncertainty_score":0.29706234},"labels":[],"label_agreement":null},{"id":"W3008060818","doi":"10.3390/v12030266","title":"Acquisition of Avian-Origin PB1 Facilitates Viral RNA Synthesis by the 2009 Pandemic H1N1 Virus Polymerase","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Public Health Agency of Canada; South Dakota State University; University of Wisconsin-Madison","keywords":"Reassortment; Biology; Polymerase; Virology; RNA polymerase; Influenza A virus subtype H5N1; Virus; H5N1 genetic structure; RNA-dependent RNA polymerase; Influenza A virus; Viral replication; RNA virus; RNA; Gene; Genetics; Coronavirus disease 2019 (COVID-19)","score_opus":0.09453499081568952,"score_gpt":0.35905298500589766,"score_spread":0.26451799419020816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008060818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9794963,0.0146506075,0.00007122558,0.002784759,0.0000687371,0.00054051314,0.001238054,0.000158016,0.0009917624],"genre_scores_gemma":[0.9890674,0.0016781512,0.00008725105,0.008568535,0.0002343245,0.00009234928,0.000014645267,0.000033716155,0.00022366873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99795914,0.00018409353,0.00044165915,0.00034084305,0.000627566,0.00044668693],"domain_scores_gemma":[0.99847907,0.00071982,0.00012318169,0.00036015833,0.0001169543,0.00020079083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029605118,0.00025852103,0.00048592204,0.000092641756,0.00019253627,0.000027576658,0.00024861278,0.00009834673,0.0006740222],"category_scores_gemma":[0.0011957396,0.00017044872,0.00016524777,0.0003300351,0.0004340245,0.00019315226,0.00012348872,0.00030537377,0.000424457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013662162,0.0001340528,0.014259498,0.0001590757,0.0003035291,0.000022157328,0.0011175894,0.000006136259,0.93793094,0.00006734992,0.033435564,0.011197895],"study_design_scores_gemma":[0.0011058238,0.0005114802,0.008645223,0.00013066451,0.00019475906,0.000007645835,0.0007194351,0.00010210738,0.93084586,0.000058816193,0.05742303,0.00025513474],"about_ca_topic_score_codex":0.0012407402,"about_ca_topic_score_gemma":0.000015627951,"teacher_disagreement_score":0.023987465,"about_ca_system_score_codex":0.00007414875,"about_ca_system_score_gemma":0.000097399505,"threshold_uncertainty_score":0.738007},"labels":[],"label_agreement":null},{"id":"W3008406275","doi":"10.3390/v12020242","title":"Measles Vaccines Designed for Enhanced CD8+ T Cell Activation","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; McMaster University Medical Centre","funders":"Else Kröner-Fresenius-Stiftung","keywords":"Epitope; Cytotoxic T cell; Virology; Antigen; Biology; Measles virus; Priming (agriculture); CD8; MHC class I; T cell; Immunology; Immune system; Measles; Vaccination; In vitro; Genetics","score_opus":0.0669839001654036,"score_gpt":0.31370870005681456,"score_spread":0.24672479989141094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008406275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98505336,0.00028696237,0.01130004,0.0020989212,0.00004967593,0.0004361202,0.000017868044,0.00013778529,0.0006192916],"genre_scores_gemma":[0.9865255,0.000031801483,0.0006692519,0.012294636,0.00027625138,0.000055782864,0.000022838067,0.000015842877,0.00010811544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994933,0.000020812153,0.00011746568,0.00017194994,0.000069331494,0.0001271417],"domain_scores_gemma":[0.99962157,0.000088849934,0.000045409517,0.00009019994,0.000053161813,0.000100811965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000029154146,0.00009361894,0.00015809872,0.000028814376,0.00006465264,0.0000070396936,0.00004800863,0.00006391839,0.00017370252],"category_scores_gemma":[0.0003258507,0.000076360244,0.00005708207,0.000092001355,0.000018785773,0.00010983551,0.000012004318,0.000045565972,0.00008472565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015863478,0.00008870611,0.001947912,0.00010730459,0.000027437742,0.000001499972,0.00011354936,0.0000066329912,0.9880339,0.000106268824,0.005850721,0.0021297182],"study_design_scores_gemma":[0.0014070307,0.0005756087,0.009310247,0.000018992847,0.00010066495,3.5903903e-7,0.00006694979,0.00006802555,0.98221076,0.00015294828,0.006003003,0.00008542949],"about_ca_topic_score_codex":0.00000496694,"about_ca_topic_score_gemma":0.0000011275542,"teacher_disagreement_score":0.010630788,"about_ca_system_score_codex":0.000008012408,"about_ca_system_score_gemma":0.000047424914,"threshold_uncertainty_score":0.31138805},"labels":[],"label_agreement":null},{"id":"W3009831701","doi":"10.3390/v12030293","title":"Peste des Petits Ruminants at the Wildlife–Livestock Interface in the Northern Albertine Rift and Nile Basin, East Africa","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Biotechnology and Biological Sciences Research Council; Engineering and Physical Sciences Research Council; Natural Environment Research Council; Sight Research UK; Wildlife Conservation Society","keywords":"Livestock; Peste-des-Petits-Ruminants; Rift Valley fever; Wildlife; Outbreak; Geography; Epizootic; Peste-des-petits-ruminants virus; Veterinary medicine; Socioeconomics; Biology; Virology; Ecology; Forestry; Virus; Medicine","score_opus":0.048981125807669536,"score_gpt":0.2805878106136368,"score_spread":0.23160668480596727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009831701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98142505,0.0029656317,0.000008015008,0.013872681,0.000030406703,0.00028632776,0.00002746513,0.00002838886,0.0013560535],"genre_scores_gemma":[0.9903165,0.00012879288,0.000015467363,0.008978824,0.00010123059,0.00002522629,0.0000038701805,0.00001636057,0.00041370324],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99909353,0.00014764901,0.00017081051,0.00022742138,0.00013631217,0.00022426095],"domain_scores_gemma":[0.9994407,0.00016801426,0.000053536445,0.0002101962,0.000023900924,0.00010364576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110583074,0.00014930374,0.00019249671,0.00002545477,0.00018427288,0.0000192242,0.00015540513,0.00005352179,0.00016891766],"category_scores_gemma":[0.0004099389,0.00007837455,0.000046868914,0.00016146275,0.0003792604,0.000090797315,0.000118122654,0.00017637719,0.00024112004],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010316324,0.00018272644,0.9744178,0.00007878819,0.000047730697,0.00005598675,0.009569962,0.000010870809,0.0038028595,0.000046090772,0.0093963975,0.0013591745],"study_design_scores_gemma":[0.0010253836,0.00066682976,0.9230695,0.000118810436,0.00014121686,0.0000604659,0.0016928163,0.0000649918,0.0011324572,0.0000724984,0.07181534,0.00013969884],"about_ca_topic_score_codex":0.00014723276,"about_ca_topic_score_gemma":0.0015306004,"teacher_disagreement_score":0.06241895,"about_ca_system_score_codex":0.000013240946,"about_ca_system_score_gemma":0.000031603042,"threshold_uncertainty_score":0.31960213},"labels":[],"label_agreement":null},{"id":"W3013494244","doi":"10.3390/v12040359","title":"Modelling Lyssavirus Infections in Human Stem Cell-Derived Neural Cultures","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Commonwealth Scientific and Industrial Research Organisation; National Health and Medical Research Council; Canadian Food Inspection Agency; California Institute for Regenerative Medicine","keywords":"Lyssavirus; Rabies; Biology; Rabies virus; Pathogenesis; Virology; Ex vivo; Stem cell; Chemokine; Neuroscience; Immunology; Rhabdoviridae; In vivo; Immune system; Cell biology; Genetics","score_opus":0.05918430383053107,"score_gpt":0.2868093265645604,"score_spread":0.2276250227340293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013494244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99361354,0.00320598,0.00087149505,0.00063816615,0.0002493872,0.0001657708,0.000018270608,0.00015145427,0.0010859296],"genre_scores_gemma":[0.9961496,0.000092288894,0.000017043521,0.0033757053,0.000057195473,0.00003614214,0.000017940032,0.000012909368,0.00024117118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987473,0.00033358613,0.0003139139,0.00028730163,0.00001751964,0.00030037583],"domain_scores_gemma":[0.99954903,0.00016702237,0.00008799782,0.00014356397,0.000023965107,0.00002844498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112897236,0.00016389068,0.00031227537,0.00005706936,0.0002421915,0.000010436987,0.0001711912,0.00028510764,0.0002260788],"category_scores_gemma":[0.000028333898,0.00014103545,0.00008712254,0.000119230135,0.000139713,0.00012170454,0.00005183561,0.00048123812,0.00037496132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011974396,0.0001067758,0.015441404,0.000013127127,0.000071823575,0.000009383954,0.0011016298,0.049378704,0.92923295,0.0012550164,0.0027731322,0.0004963214],"study_design_scores_gemma":[0.011663404,0.0016605611,0.0068890923,0.00007988572,0.00029328692,0.00007910949,0.003435879,0.016299386,0.7634829,0.0015900988,0.19265448,0.0018718841],"about_ca_topic_score_codex":0.0004626605,"about_ca_topic_score_gemma":0.00006305676,"teacher_disagreement_score":0.18988134,"about_ca_system_score_codex":0.000015201941,"about_ca_system_score_gemma":0.000017524068,"threshold_uncertainty_score":0.5751259},"labels":[],"label_agreement":null},{"id":"W3014768712","doi":"10.3390/v12040398","title":"A Novel Divergent Geminivirus Identified in Asymptomatic New World Cactaceae Plants","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Arizona State University","keywords":"Cactus; Biology; Nicotiana benthamiana; Genome; Geminiviridae; Begomovirus; Plant virus; Genetics; Botany; Virus; Gene","score_opus":0.13310852356603475,"score_gpt":0.29211711399472556,"score_spread":0.1590085904286908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014768712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99520683,0.0004968576,0.000003980647,0.0022915597,0.00010555904,0.00025477356,0.0006655273,0.000109129105,0.00086578104],"genre_scores_gemma":[0.9954694,0.00034903822,0.00006294356,0.0030119387,0.0003678364,0.000019430663,0.00003962346,0.0000017022132,0.0006780895],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99863374,0.00004629321,0.00024603817,0.00032119296,0.00035648362,0.00039624967],"domain_scores_gemma":[0.99928683,0.00034785472,0.000064072796,0.000046011613,0.000014901709,0.000240344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001153616,0.00016302154,0.00024397913,0.000031162446,0.000116092364,0.00008190163,0.0003649172,0.000042469823,0.00078856864],"category_scores_gemma":[0.00022574511,0.000065798406,0.000057820125,0.0005427227,0.000041047228,0.0001929151,0.0002689216,0.00014993934,0.00058869855],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008270514,0.00008034833,0.011787153,0.000010501132,0.000030440622,0.000033029584,0.00030566292,0.000009494479,0.92604995,0.000028669729,0.053975284,0.0076067583],"study_design_scores_gemma":[0.0010650436,0.00027809083,0.53824604,0.00017868952,0.00002093545,0.000006821631,0.00064980367,0.00040892803,0.11251392,0.00022712843,0.34564295,0.00076163694],"about_ca_topic_score_codex":0.0020940306,"about_ca_topic_score_gemma":0.01614027,"teacher_disagreement_score":0.81353605,"about_ca_system_score_codex":0.000031527903,"about_ca_system_score_gemma":0.0000181338,"threshold_uncertainty_score":0.9006649},"labels":[],"label_agreement":null},{"id":"W3015181278","doi":"10.3390/v12050526","title":"SARS-CoV-2/COVID-19: Viral Genomics, Epidemiology, Vaccines, and Therapeutic Interventions","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":316,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Epidemiology; Pandemic; Coronavirus; Medicine; Virology; Pneumonia; Genomics; Psychological intervention; Intensive care medicine; Disease; Biology; Coronavirus disease 2019 (COVID-19); Genome; Infectious disease (medical specialty); Pathology; Genetics; Internal medicine; Gene","score_opus":0.3562993452898885,"score_gpt":0.5045383056088486,"score_spread":0.1482389603189601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015181278","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024537012,0.9958976,0.0004006647,0.00084063277,0.0003034482,0.0015988072,0.00018786172,0.00022727306,0.00029837174],"genre_scores_gemma":[0.00002801376,0.8026917,0.00018638196,0.19606738,0.000607985,0.00023809033,0.000032731485,0.00012358274,0.00002412188],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99582344,0.00082193565,0.0013811991,0.0010510805,0.00023719751,0.00068515167],"domain_scores_gemma":[0.9968731,0.0015751665,0.00046164496,0.0008185624,0.00007297499,0.00019859345],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011152594,0.00071166805,0.0032873536,0.00055788935,0.0001898958,0.00005866097,0.00053756544,0.0005973675,0.00004818755],"category_scores_gemma":[0.0027953146,0.00054382207,0.0012711223,0.0004923578,0.0003100969,0.0000841308,0.00045653447,0.0011349136,0.00059967086],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018480222,0.00025828276,0.0013468817,0.046005435,0.0017613132,0.0003337826,0.00011335371,5.412573e-8,0.00076780905,0.0013625994,0.009293492,0.93857217],"study_design_scores_gemma":[0.00075785175,0.00036400298,0.000023256574,0.0032673914,0.0016257928,0.0003354938,0.000019968134,0.000016593278,0.00021001408,0.0007518035,0.99218774,0.0004400664],"about_ca_topic_score_codex":0.0006991345,"about_ca_topic_score_gemma":0.00012149079,"teacher_disagreement_score":0.9828943,"about_ca_system_score_codex":0.0005199275,"about_ca_system_score_gemma":0.0018120001,"threshold_uncertainty_score":0.9997013},"labels":[],"label_agreement":null},{"id":"W3015643973","doi":"10.3390/v12040409","title":"Influenza PB1-F2 Inhibits Avian MAVS Signaling","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Biology; RIG-I; Interferon; Cell biology; Innate immune system; Signal transduction; Transfection; Immunoprecipitation; Virology; Signal transducing adaptor protein; Influenza A virus; Ubiquitin; Virus; Cell culture; Gene; Immune system; Genetics","score_opus":0.05929958668447607,"score_gpt":0.28474528216049483,"score_spread":0.22544569547601875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015643973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989762,0.006653147,0.00009292831,0.0005665469,0.0003935651,0.00012810834,0.000032260785,0.00020780315,0.0021636537],"genre_scores_gemma":[0.98312175,0.000044690096,0.000040090854,0.015994122,0.00005220227,0.000008532367,0.000012206351,0.000023129789,0.00070328097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899745,0.00016821329,0.0002660941,0.00023658884,0.000028139804,0.00030354006],"domain_scores_gemma":[0.99958426,0.000109925684,0.00007048433,0.00016246579,0.000039516,0.000033375552],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008736133,0.00016757133,0.0002252958,0.00006718092,0.00013486431,0.000026996133,0.00021216684,0.00016730747,0.0026623362],"category_scores_gemma":[0.00019461883,0.00014699933,0.00008475593,0.00012604462,0.00012457308,0.00013507737,0.00011166174,0.00026941672,0.008291513],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005506619,0.0000339294,0.0010380533,0.000013569484,0.00008263788,0.0000060252014,0.00086231745,0.00000420265,0.98917055,0.0005488956,0.005809384,0.0018797538],"study_design_scores_gemma":[0.00048038567,0.00018613643,0.00041134222,0.000025610148,0.000013333488,0.00001094352,0.00020827682,9.364066e-7,0.65787977,0.0000148949675,0.340641,0.00012735017],"about_ca_topic_score_codex":0.00004862753,"about_ca_topic_score_gemma":0.0000029925675,"teacher_disagreement_score":0.33483163,"about_ca_system_score_codex":0.000015319632,"about_ca_system_score_gemma":0.00004767329,"threshold_uncertainty_score":0.99824935},"labels":[],"label_agreement":null},{"id":"W3016198462","doi":"10.3390/v12040424","title":"Bacteriophage ZCSE2 is a Potent Antimicrobial against Salmonella enterica Serovars: Ultrastructure, Genomics and Efficacy","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Salmonella enterica; Serotype; Salmonella; Bacteriophage; Antimicrobial; Microbiology; Biology; Virology; Ultrastructure; Genomics; Genome; Bacteria; Genetics; Gene; Escherichia coli; Anatomy","score_opus":0.018364233275833294,"score_gpt":0.22984419487966992,"score_spread":0.21147996160383664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016198462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975621,0.00004616367,0.00013314969,0.0007648509,0.00020723698,0.0002123074,0.00019640033,0.00007473239,0.0008030637],"genre_scores_gemma":[0.9807282,0.00035578615,0.0015149073,0.017129377,0.00014190088,0.000003372993,0.000018192724,0.000035471767,0.00007276773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988491,0.000034063614,0.00026011988,0.00046406942,0.00009009462,0.0003025409],"domain_scores_gemma":[0.9994597,0.000024272482,0.00010395733,0.00019124786,0.0000063257025,0.00021451521],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000031407453,0.0002378195,0.00022248868,0.00002388983,0.00016075879,0.00014874451,0.00021641115,0.00007732718,0.0020083576],"category_scores_gemma":[0.000015985814,0.00022374147,0.000085795495,0.00014330342,0.00015945917,0.00029595356,0.00028046733,0.00018019872,0.0009113169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000664138,0.00005552509,0.0012276922,0.000010447189,0.000025633262,0.000018734409,0.0008654437,0.00003871305,0.98179543,9.173873e-7,0.007922867,0.007972164],"study_design_scores_gemma":[0.0010264084,0.0001801308,0.21346153,0.00003374715,0.0000570552,0.00008872253,0.00010274696,0.00014898287,0.5079969,0.000005259411,0.27633935,0.00055914465],"about_ca_topic_score_codex":0.00019834087,"about_ca_topic_score_gemma":0.0000107199085,"teacher_disagreement_score":0.47379854,"about_ca_system_score_codex":0.00007029217,"about_ca_system_score_gemma":0.000009927285,"threshold_uncertainty_score":0.9998666},"labels":[],"label_agreement":null},{"id":"W3023580286","doi":"10.3390/v12050506","title":"Virome of a Feline Outbreak of Diarrhea and Vomiting Includes Bocaviruses and a Novel Chapparvovirus","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Positive Living Society of British Columbia","funders":"","keywords":"Human virome; Outbreak; Diarrhea; Virology; Vomiting; CATS; Feces; Biology; Microbiology; Metagenomics; Medicine; Pathology; Internal medicine; Genetics","score_opus":0.12440500483994685,"score_gpt":0.37194285522630055,"score_spread":0.2475378503863537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3023580286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968723,0.0016205674,0.00031802844,0.00031645017,0.00001803882,0.00029915164,0.00007671196,0.000042128777,0.00043663182],"genre_scores_gemma":[0.9977681,0.0002695383,0.0005968804,0.0011970983,0.000112321024,0.000014225396,0.0000016927535,0.00002555842,0.00001458279],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987958,0.0000460648,0.0004340788,0.000260647,0.00027413556,0.00018926368],"domain_scores_gemma":[0.9991478,0.00020797053,0.00013778165,0.00018132717,0.000121129684,0.00020404407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024136093,0.00014769855,0.0004575958,0.00018990174,0.00006308555,0.00001697997,0.00006979975,0.00008000274,0.00004920491],"category_scores_gemma":[0.0010094721,0.00012499784,0.000047598278,0.00034834482,0.0003782626,0.00017207455,0.0002177564,0.00017997435,0.000008557083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031212295,0.0001413045,0.14132941,0.00047227606,0.000072749724,0.000008454696,0.00034617353,0.0000038871153,0.8552573,0.00040497983,0.0000607341,0.0015906563],"study_design_scores_gemma":[0.002830936,0.0015955516,0.18108767,0.00030243467,0.00011243113,0.000045416746,0.000252996,0.000638475,0.80621487,0.00005149826,0.0066521545,0.00021556583],"about_ca_topic_score_codex":0.00039461607,"about_ca_topic_score_gemma":0.000027617401,"teacher_disagreement_score":0.049042374,"about_ca_system_score_codex":0.000014530147,"about_ca_system_score_gemma":0.00007714832,"threshold_uncertainty_score":0.50972635},"labels":[],"label_agreement":null},{"id":"W3025428915","doi":"10.3390/v12050556","title":"External Quality Assessment Program for Next-Generation Sequencing-Based HIV Drug Resistance Testing: Logistical Considerations","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; Public Health Agency; Public Health Agency of Canada","keywords":"External quality assessment; HIV drug resistance; Medical physics; Medicine; Human immunodeficiency virus (HIV); Protocol (science); Consistency (knowledge bases); Genotyping; Computer science; Family medicine; Pathology; Viral load; Antiretroviral therapy; Biology; Alternative medicine","score_opus":0.39606192633614445,"score_gpt":0.40962483388002513,"score_spread":0.013562907543880676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025428915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47325015,0.000907652,0.3186167,0.18663917,0.00052779604,0.009409346,0.00041687267,0.0020917857,0.008140538],"genre_scores_gemma":[0.6175948,0.0000023398113,0.37756094,0.003294702,0.00024582472,0.00038464065,0.00012081559,0.00001818081,0.0007777479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864036,0.00008172064,0.0004071782,0.00035625932,0.00029109637,0.00022337325],"domain_scores_gemma":[0.99882096,0.0004877722,0.000108327076,0.00016864453,0.00021704148,0.0001972567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022214508,0.00017573456,0.00027549555,0.00003942337,0.00021327342,0.00011160694,0.000043572734,0.000048801307,0.000100595804],"category_scores_gemma":[0.001082113,0.00014803796,0.00007128619,0.00013433388,0.00008100799,0.00010136241,0.000015441228,0.00011048273,0.00003094987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012332659,0.00360104,0.16797955,0.0014786992,0.00064413546,0.00055594294,0.0024013643,0.00073824066,0.48486552,0.06876807,0.2540167,0.013717476],"study_design_scores_gemma":[0.0253457,0.0016073999,0.035381608,0.0012053202,0.0017966911,0.00004375472,0.001104634,0.19678418,0.434759,0.006155264,0.29326802,0.002548421],"about_ca_topic_score_codex":0.00001392891,"about_ca_topic_score_gemma":0.000106346204,"teacher_disagreement_score":0.19604595,"about_ca_system_score_codex":0.00019768196,"about_ca_system_score_gemma":0.00092915905,"threshold_uncertainty_score":0.60368127},"labels":[],"label_agreement":null},{"id":"W3025465733","doi":"10.3390/v12050550","title":"External Quality Assessment for Next-Generation Sequencing-Based HIV Drug Resistance Testing: Unique Requirements and Challenges","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Sanger sequencing; Genotyping; HIV drug resistance; External quality assessment; Standardization; Medicine; Computational biology; DNA sequencing; Human immunodeficiency virus (HIV); Medical physics; Computer science; Biology; Viral load; Virology; Antiretroviral therapy; Genetics; Pathology; DNA; Genotype","score_opus":0.44731434345483484,"score_gpt":0.3821493620733981,"score_spread":0.06516498138143673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025465733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8699291,0.006899605,0.017691774,0.10000057,0.00017991045,0.0023551784,0.000082185434,0.00040008526,0.0024616274],"genre_scores_gemma":[0.87312365,0.00039664807,0.12108237,0.0032612141,0.0003028167,0.00021043187,0.000071103874,0.000035801855,0.0015159461],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987971,0.00008174839,0.00031033973,0.00036329747,0.00026048324,0.00018701257],"domain_scores_gemma":[0.9992741,0.00016979028,0.00012510132,0.0001549936,0.000116961484,0.00015908136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031601868,0.00017481079,0.00025890578,0.000044872664,0.00012572031,0.00004394081,0.00005371859,0.00004307803,0.000019206394],"category_scores_gemma":[0.00021207346,0.00014960908,0.000039487484,0.000086392676,0.000037584843,0.00014524581,0.000022836644,0.00007315191,0.0000066882353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012498635,0.0007497129,0.11235137,0.0030057305,0.0004688133,0.00015637385,0.0051849033,0.000048929505,0.827583,0.008171664,0.018615548,0.022414107],"study_design_scores_gemma":[0.019556848,0.0008432956,0.04944525,0.0020983156,0.0007355216,0.000011779983,0.002007968,0.016370393,0.6708322,0.0014987248,0.2349454,0.0016542926],"about_ca_topic_score_codex":0.000013774929,"about_ca_topic_score_gemma":0.00009599856,"teacher_disagreement_score":0.21632984,"about_ca_system_score_codex":0.00017261667,"about_ca_system_score_gemma":0.00033390897,"threshold_uncertainty_score":0.6100881},"labels":[],"label_agreement":null},{"id":"W3027487440","doi":"10.3390/v12050579","title":"Zika Virus with Increased CpG Dinucleotide Frequencies Shows Oncolytic Activity in Glioblastoma Stem Cells","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; University of Saskatchewan","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Neurological Disorders and Stroke; Saskatchewan Health Research Foundation","keywords":"Oncolytic virus; Glioblastoma; Zika virus; CpG site; Stem cell; Biology; Virology; Cancer research; Virus; Gene; DNA methylation; Genetics; Gene expression","score_opus":0.025597209489170183,"score_gpt":0.25308542668455736,"score_spread":0.22748821719538717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3027487440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973617,0.00039502405,0.00010013787,0.000547918,0.000054540233,0.0006394505,0.00013516046,0.0001710033,0.000595045],"genre_scores_gemma":[0.993021,0.00003390042,0.000058920952,0.0064431494,0.0002183515,0.000099316756,0.0000015418575,0.000049461825,0.00007433696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837416,0.00009201683,0.00026663952,0.0004652169,0.00040343104,0.00039854134],"domain_scores_gemma":[0.99886876,0.00014398247,0.00011580637,0.00035826565,0.00005937205,0.0004537809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000988965,0.00028318548,0.0005632335,0.00010334102,0.00006342625,0.000055472356,0.00016740643,0.00008423503,0.00050961744],"category_scores_gemma":[0.000055299413,0.0002215981,0.00011765594,0.00039227915,0.00010070169,0.00023450213,0.000058440208,0.00025627195,0.00016789763],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0074225795,0.00065410684,0.046357583,0.00027172986,0.0001667916,0.0011212033,0.00037171235,0.000078343845,0.9318975,0.00019345515,0.0020665447,0.009398401],"study_design_scores_gemma":[0.009157899,0.003922141,0.06246152,0.00044238984,0.00055428286,0.000027801032,0.0008141862,0.0035860096,0.9033348,0.000031850694,0.014930156,0.0007369543],"about_ca_topic_score_codex":0.0013602742,"about_ca_topic_score_gemma":0.0010794572,"teacher_disagreement_score":0.028562743,"about_ca_system_score_codex":0.0001264501,"about_ca_system_score_gemma":0.00031173247,"threshold_uncertainty_score":0.9036508},"labels":[],"label_agreement":null},{"id":"W3031399877","doi":"10.3390/v12060601","title":"A Novel Inducible Prophage from Burkholderia vietnamiensis G4 Is Widely Distributed across the Species and Has Lytic Activity against Pathogenic Burkholderia","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Medical Research Council; Biotechnology and Biological Sciences Research Council; Cardiff University; Public Health Wales","keywords":"Lytic cycle; Burkholderia; Prophage; Microbiology; Biology; Virology; Computational biology; Genetics; Gene; Bacteria; Bacteriophage; Virus; Escherichia coli","score_opus":0.11437889813091712,"score_gpt":0.2441656378041984,"score_spread":0.12978673967328128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3031399877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97879964,0.0005928802,0.000021391501,0.0065722866,0.00018467323,0.00041555602,0.013221458,0.00014615792,0.000045946363],"genre_scores_gemma":[0.9958081,0.00025383563,0.000051608302,0.0031601337,0.000488615,0.00003929001,0.00016061435,0.0000042765273,0.000033510038],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980698,0.000103426355,0.0003003892,0.0007247225,0.00027845937,0.00052318943],"domain_scores_gemma":[0.9990755,0.00032794467,0.00019589844,0.00015975328,0.00006442509,0.00017652324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018122973,0.00036369846,0.00044891064,0.0000062204954,0.000863661,0.00044235997,0.00042821767,0.00014881726,0.000120609366],"category_scores_gemma":[0.00025230277,0.00013680631,0.00013048465,0.00047002183,0.0003901946,0.00031966105,0.00053747144,0.00023146144,0.00005803219],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001121986,0.00007459696,0.0018494749,0.000008924125,0.00008325719,0.000016023914,0.0013219822,0.0000010124179,0.9927826,0.000008385227,0.0016328021,0.002108744],"study_design_scores_gemma":[0.0005250044,0.00021508914,0.7017854,0.000045447465,0.00008194596,0.000013684815,0.0019146788,0.00011924691,0.24202643,0.000067267334,0.05265153,0.0005542787],"about_ca_topic_score_codex":0.00041689596,"about_ca_topic_score_gemma":0.00053338544,"teacher_disagreement_score":0.75075614,"about_ca_system_score_codex":0.000030139283,"about_ca_system_score_gemma":0.000027100188,"threshold_uncertainty_score":0.66426694},"labels":[],"label_agreement":null},{"id":"W3032582312","doi":"10.3390/v12060586","title":"Are We Ready for NGS HIV Drug Resistance Testing? The Second “Winnipeg Consensus” Symposium","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"AIDS Vancouver; University of British Columbia; University of Manitoba; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; Consejo Nacional de Ciencia y Tecnología; Public Health Agency; Public Health Agency of Canada","keywords":"HIV drug resistance; Sanger sequencing; Drug resistance; Human immunodeficiency virus (HIV); Medicine; DNA sequencing; Computational biology; Virology; Antiretroviral therapy; Biology; Viral load; Genetics","score_opus":0.09013228476923313,"score_gpt":0.2968887581965474,"score_spread":0.2067564734273143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3032582312","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38667694,0.0041517415,0.00006235799,0.58067113,0.0003405032,0.0026946876,0.00061435037,0.00060346466,0.02418482],"genre_scores_gemma":[0.4273771,0.00017802122,0.013890343,0.050849855,0.0011883617,0.00051979884,0.00010808159,0.00018244529,0.50570595],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99889684,0.000035494395,0.00026905362,0.00032493475,0.0001938159,0.0002798843],"domain_scores_gemma":[0.99872786,0.00057353324,0.00016751386,0.00025802915,0.00012504937,0.00014801968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121351026,0.0002034678,0.00030064635,0.000035902278,0.00019148439,0.000034856817,0.000115037634,0.000046861733,0.00014017033],"category_scores_gemma":[0.00028584042,0.00013162996,0.00006771709,0.00022867763,0.00009596328,0.00003836722,0.000038302725,0.00012232705,0.0002292684],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039758455,0.00009503368,0.019868268,0.0003170188,0.00018309377,0.00011926798,0.002140794,8.445863e-7,0.011237982,0.00033888972,0.965137,0.00016423936],"study_design_scores_gemma":[0.0015184325,0.000031678504,0.0011929362,0.00019723644,0.000140427,0.000012811005,0.0006876055,0.000036042875,0.023626268,0.00011239026,0.972276,0.00016822701],"about_ca_topic_score_codex":0.0000031427603,"about_ca_topic_score_gemma":0.000077170975,"teacher_disagreement_score":0.5298213,"about_ca_system_score_codex":0.00004667979,"about_ca_system_score_gemma":0.0001248674,"threshold_uncertainty_score":0.53677136},"labels":[],"label_agreement":null},{"id":"W3033664814","doi":"10.3390/v12060617","title":"Next-Generation Sequencing for HIV Drug Resistance Testing: Laboratory, Clinical, and Implementation Considerations","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; Consejo Nacional de Ciencia y Tecnología; Public Health Agency; Public Health Agency of Canada","keywords":"Genotyping; HIV drug resistance; Sanger sequencing; Massive parallel sequencing; Computer science; Medicine; DNA sequencing; Human immunodeficiency virus (HIV); Viral load; Biology; Virology; Antiretroviral therapy; Genetics; Genotype","score_opus":0.35404961579799255,"score_gpt":0.44495023673967804,"score_spread":0.0909006209416855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033664814","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000099372395,0.9950184,0.00009572146,0.0017847095,0.00016773773,0.0022594281,0.00035778308,0.00010888516,0.000107927546],"genre_scores_gemma":[0.000032893848,0.9653371,0.030739896,0.00073626766,0.000609104,0.00053434155,0.00077550235,0.000059082508,0.0011757965],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99814045,0.00014201779,0.0008965043,0.00048645478,0.00015609156,0.00017848123],"domain_scores_gemma":[0.99833876,0.00077401876,0.00035730182,0.00019214943,0.0001902209,0.0001475512],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003211095,0.00030632736,0.0010229854,0.00010769406,0.0002479395,0.00012622058,0.000037395108,0.00011467377,0.000046726233],"category_scores_gemma":[0.00067527074,0.0002525697,0.00012885954,0.00023194231,0.000063911204,0.0001528411,0.00002683634,0.0001565628,0.000043646876],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033873563,0.0001424329,0.0014094379,0.014514269,0.0012896289,0.00014052221,0.0008740362,1.8515875e-7,0.00017616594,0.0025305192,0.4858,0.49308893],"study_design_scores_gemma":[0.0007508077,0.000029088633,0.0000051973884,0.0020641899,0.0014282867,0.000009521464,0.00009763104,0.000014008835,0.000107343476,0.000051532228,0.99522346,0.00021891792],"about_ca_topic_score_codex":0.0000047758153,"about_ca_topic_score_gemma":0.00015130633,"teacher_disagreement_score":0.5094235,"about_ca_system_score_codex":0.00015357665,"about_ca_system_score_gemma":0.0017571694,"threshold_uncertainty_score":0.99999267},"labels":[],"label_agreement":null},{"id":"W3033699549","doi":"10.3390/v12060607","title":"Detection and Replication of Moku Virus in Honey Bees and Social Wasps","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Natural Environment Research Council","keywords":"Vespidae; Biology; Honey bee; Brood; Zoology; Botany; Hymenoptera; Ecology","score_opus":0.0827652528483402,"score_gpt":0.2880310914506303,"score_spread":0.20526583860229014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033699549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99877006,0.00019625071,0.0000011791398,0.0008440795,0.0000062174604,0.000060876428,0.000012359379,0.000010777984,0.000098216595],"genre_scores_gemma":[0.99953717,0.00015710872,0.000006979163,0.000210816,0.00007809289,0.0000039896504,0.0000023546195,2.8558676e-7,0.0000031800255],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996457,0.00003199112,0.000073387775,0.00011855534,0.000063967775,0.00006638869],"domain_scores_gemma":[0.9998574,0.00006834056,0.000023079154,0.000012675289,0.000015365034,0.000023141944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090300244,0.000033216682,0.000062529725,0.0000066489124,0.00005609335,0.0000144630185,0.00003293899,0.000037023172,0.000042330787],"category_scores_gemma":[0.00005946324,0.000014058629,0.000008713975,0.00012119141,0.000041575986,0.000055261076,0.000026957629,0.000045740922,0.000002422263],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003611784,0.000008073036,0.011537878,0.000010135571,0.0000012466132,3.3115103e-7,0.00021902722,1.4227473e-7,0.9171433,0.00007538184,0.00001507707,0.07095327],"study_design_scores_gemma":[0.00008752748,0.00020923384,0.6393026,0.0000047745275,0.0000027456822,9.582086e-7,0.00019693056,0.0001233209,0.35666528,0.00040323552,0.0029451172,0.000058244656],"about_ca_topic_score_codex":0.0011969003,"about_ca_topic_score_gemma":0.0011107321,"teacher_disagreement_score":0.62776476,"about_ca_system_score_codex":0.0000031284922,"about_ca_system_score_gemma":0.0000019933088,"threshold_uncertainty_score":0.18093632},"labels":[],"label_agreement":null},{"id":"W3033869738","doi":"10.3390/v12060610","title":"Differential Effects of Human Adenovirus E1A Protein Isoforms on Aerobic Glycolysis in A549 Human Lung Epithelial Cells","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; McGill University Health Centre; University of Manitoba; Western University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Warburg effect; Anaerobic glycolysis; Glycolysis; Reprogramming; Viral replication; Cell; Cell culture; Metabolism; Biochemistry; Genetics","score_opus":0.018390919685485962,"score_gpt":0.294353714086078,"score_spread":0.27596279440059207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033869738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986467,0.00020029511,0.000044010176,0.000051298983,0.000057956382,0.0008327801,0.00004030445,0.000023684826,0.00010298189],"genre_scores_gemma":[0.9988381,0.000044680204,0.000020643065,0.00042804106,0.00031478386,0.00011889487,0.00004692915,0.000058777543,0.00012910913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998161,0.00018813055,0.00036834175,0.0005211652,0.00033595884,0.00042541214],"domain_scores_gemma":[0.99921125,0.000022947424,0.00012957021,0.0004452762,0.00004471634,0.0001462572],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000097648444,0.0002793357,0.00035154363,0.00013744218,0.00011472249,0.000031148218,0.00045484252,0.00019918819,0.0002097183],"category_scores_gemma":[0.000052628064,0.00025131108,0.0001647834,0.00023317111,0.0001406458,0.000007748365,0.0001833878,0.00023903469,0.00004775147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018455837,0.00029206532,0.00051194994,0.00017422345,0.000098016375,0.000015973055,0.00012375906,0.000041014842,0.99579436,0.00004282571,0.00024744845,0.00081279594],"study_design_scores_gemma":[0.0019445847,0.006452113,0.00066777976,0.00005484863,0.00002117121,2.7065053e-7,0.000016266107,0.000019773268,0.9901618,0.000030812753,0.00036578058,0.0002648243],"about_ca_topic_score_codex":0.00012586934,"about_ca_topic_score_gemma":0.00019809483,"teacher_disagreement_score":0.006160048,"about_ca_system_score_codex":0.000032642558,"about_ca_system_score_gemma":0.000063157786,"threshold_uncertainty_score":0.9999939},"labels":[],"label_agreement":null},{"id":"W3034274180","doi":"10.3390/v12060645","title":"Quality Control of Next-Generation Sequencing-Based HIV-1 Drug Resistance Data in Clinical Laboratory Information Systems Framework","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Public Health Agency of Canada","funders":"","keywords":"HIV drug resistance; Human immunodeficiency virus (HIV); Quality (philosophy); Computer science; Data mining; Medicine; Data science; Viral load; Virology; Antiretroviral therapy","score_opus":0.2480234086914881,"score_gpt":0.41991271198827534,"score_spread":0.17188930329678725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034274180","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000050768434,0.9933124,0.0021815447,0.0004156129,0.00042718556,0.001666125,0.0017789032,0.0000668848,0.00010053908],"genre_scores_gemma":[0.0012186255,0.99027836,0.0027207762,0.0006768361,0.00040829304,0.0001621319,0.004358512,0.000036095687,0.00014038313],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99564815,0.0008477461,0.0024254615,0.0004006747,0.0004929388,0.00018500556],"domain_scores_gemma":[0.99651587,0.0010247601,0.001163668,0.0009944981,0.00017178296,0.00012943335],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018139627,0.0003404602,0.0022246416,0.00021183013,0.000039466868,0.000056587196,0.00029314324,0.00035731622,0.000017148812],"category_scores_gemma":[0.00211669,0.00026658192,0.0001620537,0.0005502256,0.00006971335,0.00043084388,0.000055235327,0.0005024451,0.00017729374],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014635937,0.0015743122,0.018825477,0.25150922,0.0042003435,0.00042556232,0.0020839754,0.00006402602,0.000027493481,0.0074804355,0.15267265,0.5596729],"study_design_scores_gemma":[0.0010335972,0.000015693138,0.00002914156,0.015076225,0.00053818134,7.573213e-7,0.000056221506,0.00028087353,0.0000065356967,0.0000022561085,0.9827452,0.0002153756],"about_ca_topic_score_codex":0.000039908617,"about_ca_topic_score_gemma":0.000090891095,"teacher_disagreement_score":0.83007246,"about_ca_system_score_codex":0.0003642659,"about_ca_system_score_gemma":0.0031175255,"threshold_uncertainty_score":0.99997866},"labels":[],"label_agreement":null},{"id":"W3035229792","doi":"10.3390/v12060627","title":"Development and Application of Performance Assessment Criteria for Next-Generation Sequencing-Based HIV Drug Resistance Assays","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"HIV drug resistance; Sanger sequencing; Quality assurance; Medicine; Standardization; External quality assessment; Clinical microbiology; Drug resistance; Human immunodeficiency virus (HIV); Medical physics; Computational biology; Computer science; Data mining; DNA sequencing; Viral load; Virology; Biology; Antiretroviral therapy; Microbiology; Pathology; DNA","score_opus":0.10222095833284281,"score_gpt":0.3205096652558905,"score_spread":0.21828870692304767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035229792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9216313,0.0002984338,0.06946652,0.0067292615,0.000048548976,0.001164164,0.000024655801,0.00008437259,0.00055274856],"genre_scores_gemma":[0.84135747,0.000022999295,0.15696724,0.00073734915,0.00006616086,0.00024051074,0.00016166024,0.000015300302,0.00043132197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991357,0.000017827995,0.0002923969,0.0002428874,0.0001862617,0.00012494712],"domain_scores_gemma":[0.9995618,0.000038301358,0.00010646588,0.00011384288,0.0000940281,0.000085548694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001696197,0.0001296867,0.00020920836,0.000051195868,0.00010092419,0.000020244799,0.000041902924,0.00003388474,0.000016149583],"category_scores_gemma":[0.000024166937,0.00011270821,0.000025142068,0.00010890718,0.000028794633,0.00011408013,0.000014777105,0.000042096126,0.000008063428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069026416,0.00031743778,0.04498241,0.0019833578,0.00023236383,0.0000071493114,0.0045785587,0.000083415434,0.90666,0.0019536726,0.015324611,0.023186736],"study_design_scores_gemma":[0.001999107,0.0000555742,0.0034525031,0.00013100289,0.00009287223,9.3315225e-7,0.0001820263,0.034814596,0.7525563,0.00000965853,0.20650837,0.00019705747],"about_ca_topic_score_codex":0.0000018599649,"about_ca_topic_score_gemma":0.00002282319,"teacher_disagreement_score":0.19118376,"about_ca_system_score_codex":0.00013098303,"about_ca_system_score_gemma":0.00034664772,"threshold_uncertainty_score":0.45961073},"labels":[],"label_agreement":null},{"id":"W3036720956","doi":"10.3390/v12060666","title":"Dry Panels Supporting External Quality Assessment Programs for Next Generation Sequencing-Based HIV Drug Resistance Testing","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Bottleneck; Computer science; External quality assessment; Raw data; Human immunodeficiency virus (HIV); Software; Data mining; Computational biology; Medicine; Biology; Embedded system; Operating system","score_opus":0.3024744946804234,"score_gpt":0.3832677222496408,"score_spread":0.08079322756921736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036720956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95735943,0.00021253042,0.03098161,0.0089833345,0.000112039146,0.0014943222,0.000034342997,0.0003350166,0.00048739454],"genre_scores_gemma":[0.81437945,0.0000033861402,0.18133456,0.0019251875,0.0003878984,0.0002541906,0.00018856396,0.000034147455,0.0014926159],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982569,0.00007484114,0.0005571022,0.00041239927,0.00036691877,0.00033182566],"domain_scores_gemma":[0.99899644,0.00019878361,0.00027059426,0.00017905918,0.0001651732,0.00018994106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046604508,0.00020903924,0.00032329344,0.000043165794,0.00019092832,0.00010098525,0.00007783041,0.00004727346,0.00005229251],"category_scores_gemma":[0.00037866685,0.00017860545,0.00009347781,0.0001971531,0.00003555549,0.00016911767,0.000024017983,0.00011284608,0.0000234778],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003663243,0.00041941705,0.5301355,0.00090100634,0.00018084924,0.00014949031,0.0025849403,0.000079765385,0.42817497,0.00036189827,0.004622884,0.03202296],"study_design_scores_gemma":[0.015215768,0.0005160446,0.035001643,0.0017892565,0.0007772819,0.000008418698,0.0027310762,0.06688604,0.8046481,0.00037288605,0.0704471,0.0016063894],"about_ca_topic_score_codex":0.000035579797,"about_ca_topic_score_gemma":0.000062343905,"teacher_disagreement_score":0.49513385,"about_ca_system_score_codex":0.00024341124,"about_ca_system_score_gemma":0.00063468824,"threshold_uncertainty_score":0.72833186},"labels":[],"label_agreement":null},{"id":"W3037443794","doi":"10.3390/v12070694","title":"Multi-Laboratory Comparison of Next-Generation to Sanger-Based Sequencing for HIV-1 Drug Resistance Genotyping","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; AIDS Vancouver; University of British Columbia","funders":"National Institute on Minority Health and Health Disparities; National Institute of Allergy and Infectious Diseases; Public Health Agency of Canada; University of North Carolina at Chapel Hill; Public Health England; Brown University","keywords":"Sanger sequencing; Genotyping; Concordance; DNA sequencing; Biology; HIV drug resistance; Genetics; Drug resistance; Computational biology; Human immunodeficiency virus (HIV); Virology; Genotype; Viral load; DNA; Gene; Antiretroviral therapy","score_opus":0.19111461461812412,"score_gpt":0.3494872228951715,"score_spread":0.15837260827704736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3037443794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9609123,0.0018372327,0.025560101,0.010059838,0.000123675,0.0011777548,0.00011108836,0.000132629,0.00008536876],"genre_scores_gemma":[0.841484,0.0000070919837,0.15473318,0.0028521956,0.00016088602,0.0000836317,0.00008485273,0.000027625923,0.0005665367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99912304,0.000028660403,0.0002984844,0.00023399621,0.0001612341,0.00015461203],"domain_scores_gemma":[0.99943715,0.00006745835,0.000094392744,0.0001345622,0.0001347704,0.0001316459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009568243,0.00012929292,0.00029266218,0.00007515145,0.00008107322,0.000016362086,0.000054898406,0.00003635131,0.000027883749],"category_scores_gemma":[0.00015849737,0.00011826763,0.000048137634,0.00022762993,0.000019656944,0.000077774646,0.00001292292,0.000051814106,0.000048609716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031475897,0.00012045733,0.011893081,0.00023900467,0.000070352406,0.0000060264724,0.004240455,0.00022960536,0.9400287,0.00004124056,0.042174753,0.0006415396],"study_design_scores_gemma":[0.0018453721,0.000057574387,0.0005940177,0.00017220678,0.0001018989,9.9139484e-8,0.00055964856,0.009328308,0.9063582,0.0000012138964,0.080816954,0.00016453587],"about_ca_topic_score_codex":0.000006086305,"about_ca_topic_score_gemma":0.00010632577,"teacher_disagreement_score":0.12917309,"about_ca_system_score_codex":0.00013127005,"about_ca_system_score_gemma":0.00025289183,"threshold_uncertainty_score":0.4822814},"labels":[],"label_agreement":null},{"id":"W3037795974","doi":"10.3390/v12070702","title":"Polycistronic Genome Segment Evolution and Gain and Loss of FAST Protein Function during Fusogenic Orthoreovirus Speciation","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Viral evolution; Reoviridae; Genome; Genetics; Virology; Evolutionary biology; Infectious pancreatic necrosis virus; Virus; Subgenomic mRNA; Gene; Rotavirus","score_opus":0.027467478197005984,"score_gpt":0.27040892184747906,"score_spread":0.24294144365047307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3037795974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99570554,0.0015099946,0.0017312835,0.00058058184,0.000017377028,0.000363777,0.000029866984,0.000024754305,0.000036835547],"genre_scores_gemma":[0.9990243,0.0003273189,0.00017614437,0.00020355213,0.00018140895,0.000018898658,0.000016026095,0.00001045829,0.000041930638],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99910396,0.00007851005,0.00023455809,0.00021677559,0.00013945729,0.00022675145],"domain_scores_gemma":[0.99962986,0.000006844099,0.00008099379,0.00008432658,0.000032786174,0.00016517303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012929835,0.000095839394,0.00022574702,0.00006865324,0.000050381954,0.000007799938,0.000026625843,0.000047829908,0.00006506739],"category_scores_gemma":[0.00013486609,0.0000847079,0.00003391452,0.000088249864,0.00009673329,0.00009120227,0.0000596316,0.000117521144,0.000010791312],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014653548,0.00003305803,0.19247432,0.0002092072,0.000051794053,0.000013416062,0.00006310992,0.000009629954,0.8041161,0.00011031824,0.000019778197,0.0014339525],"study_design_scores_gemma":[0.0018663503,0.0019455404,0.9850898,0.0000784041,0.000043466527,0.000050246577,0.00014405708,0.00024047225,0.009885532,0.00008480912,0.00048297137,0.00008834954],"about_ca_topic_score_codex":0.000085657986,"about_ca_topic_score_gemma":0.000028282835,"teacher_disagreement_score":0.7942305,"about_ca_system_score_codex":0.00007471252,"about_ca_system_score_gemma":0.00003399261,"threshold_uncertainty_score":0.34542876},"labels":[],"label_agreement":null},{"id":"W3042928905","doi":"10.3390/v12070755","title":"Innate Immune Sensing of Influenza A Virus","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Public Health Agency of Canada","keywords":"Innate immune system; Pattern recognition receptor; RIG-I; Interferon; Biology; Influenza A virus; Virus; Virology; Immune system; Proinflammatory cytokine; Pyrin domain; Immunology; MDA5; Viral replication; Inflammasome; Inflammation; Gene; RNA interference; Genetics","score_opus":0.07778057556814046,"score_gpt":0.3505998385159559,"score_spread":0.27281926294781544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042928905","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015098159,0.9976098,0.000010171006,0.0000074824707,0.0008611992,0.00036135747,0.00022546985,0.000105770574,0.0006677883],"genre_scores_gemma":[0.00008815426,0.99887115,0.00003219213,0.00031100525,0.000040158906,0.000009828865,0.00006229019,0.00007451621,0.0005107028],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974115,0.0006972699,0.0011178772,0.0003692471,0.000041313648,0.00036278658],"domain_scores_gemma":[0.99832726,0.00039878133,0.0006723101,0.00050926243,0.00007068844,0.000021690461],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019433012,0.0005006673,0.0024012572,0.00032208068,0.00008950252,0.000018571365,0.00043847502,0.00063500507,0.0006113281],"category_scores_gemma":[0.0003462444,0.0003951011,0.0006484241,0.00032093137,0.00029421563,0.00007981629,0.00031136945,0.00071733404,0.0034676674],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020113189,0.00005045613,4.2171763e-7,0.0032272923,0.0010354411,0.000023865712,0.00016554484,4.5616872e-8,0.045081336,0.00018506084,0.0010993798,0.94893],"study_design_scores_gemma":[0.00029182973,0.00017509825,0.0000017727872,0.0059044687,0.0004946214,0.00015532254,0.000027880862,7.927979e-8,0.0381682,0.000005947481,0.95443773,0.00033705813],"about_ca_topic_score_codex":0.0002139594,"about_ca_topic_score_gemma":0.0000035762196,"teacher_disagreement_score":0.9533383,"about_ca_system_score_codex":0.000053319003,"about_ca_system_score_gemma":0.0003330266,"threshold_uncertainty_score":0.9998501},"labels":[],"label_agreement":null},{"id":"W3043288378","doi":"10.3390/v12070771","title":"ZIKV Infection Induces DNA Damage Response and Alters the Proteome of Gastrointestinal Cells","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; University of Manitoba","funders":"Children's Hospital Research Institute of Manitoba","keywords":"Zika virus; Biology; Proteome; Proteomics; Progenitor cell; Virology; Immunology; Microcephaly; Virus; Bioinformatics; Cell biology; Stem cell; Genetics","score_opus":0.03135589716980985,"score_gpt":0.27575404953184296,"score_spread":0.2443981523620331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3043288378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970779,0.000117908225,0.00008770971,0.0022022738,0.000025094076,0.00036546448,0.00001785673,0.000030232859,0.00007560465],"genre_scores_gemma":[0.99750936,0.000014135819,0.00008643414,0.0022196341,0.00011568884,0.000020389645,0.0000013397557,0.0000095539035,0.000023478799],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99941343,0.00008595813,0.0001364623,0.00013538316,0.00012350868,0.00010527894],"domain_scores_gemma":[0.99954915,0.0001071734,0.00007047001,0.00012958393,0.00003845503,0.00010518956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013011719,0.000081066675,0.00013714065,0.000030256302,0.000042675427,0.00001686507,0.00004387631,0.000016761067,0.00006849208],"category_scores_gemma":[0.0002973245,0.00005253633,0.000045027937,0.00010324591,0.000083268314,0.00005941543,0.000032382806,0.000091348884,0.000011284267],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029355932,0.00005119851,0.017144155,0.000077420096,0.000021306283,0.000019991201,0.00021303231,0.000005390232,0.97806156,0.000031270665,0.0005437469,0.0008953602],"study_design_scores_gemma":[0.0020466184,0.002460575,0.6389663,0.00023218514,0.00021659523,0.000040410443,0.00039217845,0.0004696756,0.3498123,0.000029036612,0.0052029057,0.00013122789],"about_ca_topic_score_codex":0.00009952954,"about_ca_topic_score_gemma":0.000003312409,"teacher_disagreement_score":0.6282492,"about_ca_system_score_codex":0.0000070076962,"about_ca_system_score_gemma":0.000063726635,"threshold_uncertainty_score":0.21423693},"labels":[],"label_agreement":null},{"id":"W3043450171","doi":"10.3390/v12070757","title":"The bZIP Proteins of Oncogenic Viruses","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Leucine zipper; bZIP domain; Biology; Heptad repeat; Basic helix-loop-helix leucine zipper transcription factors; Virus; Virology; Transcription factor; ATF3; Viral replication; DNA; Cell biology; Genetics; DNA-binding protein; Gene; Peptide sequence; Gene expression","score_opus":0.07307440923833831,"score_gpt":0.3227094289213565,"score_spread":0.2496350196830182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3043450171","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000017312173,0.9961548,0.000003026465,0.000038664904,0.0011063897,0.0008826287,0.00032396315,0.000099051475,0.0013741829],"genre_scores_gemma":[0.00003661766,0.99747485,0.000015395612,0.00016726002,0.00015409033,0.00019579781,0.000023330333,0.000057105666,0.0018755308],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978936,0.00039528243,0.00080259953,0.00041629473,0.00006352142,0.00042872524],"domain_scores_gemma":[0.99815065,0.0006224932,0.00062655914,0.0005170742,0.000057716366,0.000025517087],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001863282,0.00049779227,0.0018119792,0.00008982698,0.0004677498,0.000020904914,0.0007505307,0.0004982947,0.00016460437],"category_scores_gemma":[0.0002523203,0.0002582559,0.00072755717,0.0002910595,0.0007185133,0.000041349856,0.00041268603,0.000648193,0.0025860076],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045371493,0.000083602485,0.000009910284,0.0029194094,0.0021277233,0.000009012243,0.0001174762,2.8207516e-8,0.0034853907,0.0010198584,0.012219418,0.9779628],"study_design_scores_gemma":[0.00018493888,0.00018682236,0.0000014740139,0.0016239485,0.00080698944,0.00002718378,0.00005155698,6.4499637e-9,0.003649802,0.000035896162,0.9931491,0.0002822941],"about_ca_topic_score_codex":0.00016230413,"about_ca_topic_score_gemma":0.00005321549,"teacher_disagreement_score":0.9809297,"about_ca_system_score_codex":0.000044834203,"about_ca_system_score_gemma":0.00033625533,"threshold_uncertainty_score":0.99998695},"labels":[],"label_agreement":null},{"id":"W3044564071","doi":"10.3390/v12080797","title":"A Lactococcal Phage Protein Promotes Viral Propagation and Alters the Host Proteomic Response During Infection","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Novalait","keywords":"Lactococcus lactis; Biology; Proteome; Bacteriophage; Proteomics; Virulence; Microbiology; Bacteria; Lactococcus; Phage display; Strain (injury); Function (biology); Mutant; Computational biology; Lactic acid; Genetics; Escherichia coli; Gene; Antibody","score_opus":0.016146417502847097,"score_gpt":0.24137913425160426,"score_spread":0.22523271674875717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044564071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969451,0.000006142473,0.00009265706,0.0015883911,0.000032655927,0.0011900442,0.000008903093,0.000066261884,0.000069835725],"genre_scores_gemma":[0.9991308,0.000004189254,0.0001174443,0.000396478,0.000058927173,0.00016295837,0.0000011252783,0.00001241581,0.000115669915],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993421,0.00011882223,0.00012302611,0.00020672086,0.00007205743,0.00013729767],"domain_scores_gemma":[0.9997644,0.00001737715,0.00006573948,0.00009252603,0.000004019835,0.000055953755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107810345,0.000099999335,0.00006846615,0.000015031919,0.00023262025,0.000093676856,0.00006725019,0.000033551856,0.00033392216],"category_scores_gemma":[0.000085597996,0.00007070679,0.000026793135,0.00010455744,0.0001163734,0.0004562156,0.00011059162,0.00013852789,0.00020634755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035912782,0.000025499185,0.0015928614,0.000013477086,0.000005177854,0.000003369366,0.00059130683,0.000007744942,0.9968175,0.0000031611112,0.000036480316,0.00054426666],"study_design_scores_gemma":[0.00020285694,0.0001458613,0.32331967,0.000019206547,0.0000067960113,0.0000132670075,0.000019664205,0.0001219481,0.67371225,0.00000567913,0.0023487308,0.00008403534],"about_ca_topic_score_codex":0.00042297406,"about_ca_topic_score_gemma":0.000052466272,"teacher_disagreement_score":0.32310525,"about_ca_system_score_codex":0.00005773243,"about_ca_system_score_gemma":0.000007938741,"threshold_uncertainty_score":0.36562136},"labels":[],"label_agreement":null},{"id":"W3045467309","doi":"10.3390/v12070783","title":"Inter-Strain Epigenomic Profiling Reveals a Candidate IAP Master Copy in C3H Mice","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Terry Fox Research Institute","funders":"National Institute of General Medical Sciences; National Cancer Institute","keywords":"Biology; H3K4me3; Epigenetics; Genetics; Molecular biology; Long terminal repeat; Inbred strain; Promoter; Gene; Genome; Gene expression","score_opus":0.0575937153178004,"score_gpt":0.2514959224613468,"score_spread":0.1939022071435464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045467309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99514127,0.00011192743,0.000007139754,0.0038365845,0.00005646988,0.00017140523,0.00024220924,0.000034821158,0.00039817847],"genre_scores_gemma":[0.9966273,0.000021440908,0.00023882819,0.0027766193,0.00021421477,0.000014669543,0.00003448703,8.921484e-7,0.00007156555],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992865,0.000052705906,0.00019333996,0.0002191942,0.00006619468,0.00018211253],"domain_scores_gemma":[0.9997631,0.00006699084,0.00004697005,0.000029001296,0.000013935625,0.00008001659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007465925,0.00009142942,0.00012338455,0.000006920043,0.000058486785,0.000042365024,0.00015451381,0.000044785877,0.0006534687],"category_scores_gemma":[0.000041181553,0.00003788031,0.000038428225,0.00019629742,0.000017497021,0.00006444824,0.000061065446,0.00007627047,0.00019235857],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020153408,0.000023097597,0.04177145,0.0000055904975,0.0000051663847,0.0000051666084,0.00029574113,0.00000609391,0.9534094,0.0001278065,0.00013445951,0.0041958774],"study_design_scores_gemma":[0.0010949678,0.0009917275,0.62231964,0.00016909731,0.000042823507,0.000015844125,0.0019996646,0.0007426528,0.25210372,0.0030162234,0.116442494,0.001061143],"about_ca_topic_score_codex":0.00034125987,"about_ca_topic_score_gemma":0.0010814468,"teacher_disagreement_score":0.7013057,"about_ca_system_score_codex":0.000014687527,"about_ca_system_score_gemma":0.000008720643,"threshold_uncertainty_score":0.7155024},"labels":[],"label_agreement":null},{"id":"W3046133518","doi":"10.3390/v12080814","title":"Assessment of Metagenomic Sequencing and qPCR for Detection of Influenza D Virus in Bovine Respiratory Tract Samples","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Shared Health; University of Saskatchewan","funders":"Saskatchewan Cattlemen's Association; Beef Cattle Research Council","keywords":"Metagenomics; Biology; Nanopore sequencing; Nanopore; Real-time polymerase chain reaction; DNA sequencing; Computational biology; Gene; Genetics; Nanotechnology","score_opus":0.08658761025821463,"score_gpt":0.32156090640626694,"score_spread":0.23497329614805232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3046133518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955652,0.0033657348,0.00073954306,0.0000102115255,0.000024267802,0.00016630284,0.00009918616,0.0000013336589,0.000028256147],"genre_scores_gemma":[0.99807525,0.00021436432,0.0012227456,0.00040873472,0.000048607777,0.00001713945,0.0000021637136,0.000010356935,6.385064e-7],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994364,0.000027717111,0.00023958442,0.00016951075,0.000040728683,0.00008606362],"domain_scores_gemma":[0.99969923,0.00003098963,0.00011382221,0.00009380626,0.00003515803,0.000026972628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001341733,0.00008161584,0.00017338016,0.000033097644,0.000023779596,0.0000038626654,0.000056379737,0.000049255334,0.0000014900739],"category_scores_gemma":[0.000081902755,0.00007930569,0.000041980016,0.000044257788,0.00004620449,0.0000011850395,0.000050498587,0.000028988732,9.1393744e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006625193,0.00001633492,0.031909637,0.00005896531,0.000042130385,1.6148296e-7,0.000071997376,0.00016975492,0.9666079,0.000038728962,0.0000043373425,0.0010137646],"study_design_scores_gemma":[0.0004224075,0.0005664014,0.128984,0.000005584592,0.00002200978,3.456509e-7,0.000101199745,0.00004938882,0.8651691,0.000050350278,0.0045574126,0.000071803486],"about_ca_topic_score_codex":0.00010619418,"about_ca_topic_score_gemma":0.00010568082,"teacher_disagreement_score":0.10143885,"about_ca_system_score_codex":0.000009502724,"about_ca_system_score_gemma":0.00005826917,"threshold_uncertainty_score":0.32339922},"labels":[],"label_agreement":null},{"id":"W3047288045","doi":"10.3390/v12080852","title":"Contribution of Human Retroviruses to Disease Development—A Focus on the HIV– and HERV–Cancer Relationships and Treatment Strategies","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Ministry of Science and Technology, Taiwan; Public Health Agency; Public Health Agency of Canada","keywords":"Biology; Cancer; Epigenetics; Carcinogenesis; Disease; Germline; Immune system; Oncovirus; Virology; Immunology; Virus; Genetics; Medicine; Gene","score_opus":0.10175508733161209,"score_gpt":0.32943648432142036,"score_spread":0.22768139698980827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047288045","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0069423793,0.9912161,0.0000036430554,0.0002668471,0.00012278432,0.0007679585,0.00048795357,0.000043645043,0.00014867712],"genre_scores_gemma":[0.050748523,0.948457,0.000006805894,0.00008036407,0.000046177298,0.00027245405,0.000073783835,0.000023060094,0.00029179902],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99860096,0.000343858,0.00042198508,0.00037199588,0.000043691125,0.00021751881],"domain_scores_gemma":[0.99896747,0.0004989565,0.00024698017,0.00019389665,0.000043823853,0.000048881033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011097457,0.0003758503,0.0009342326,0.000104056846,0.0005888224,0.000033960016,0.00012027275,0.00019501447,0.00005645648],"category_scores_gemma":[0.00012808389,0.00020582165,0.0001093256,0.00013785652,0.00027929217,0.000052969805,0.00011828756,0.00025233722,0.00012313169],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046540552,0.00040343727,0.007429762,0.00265005,0.004321511,0.000021890493,0.0026358876,9.0803337e-7,0.0023558694,0.03752028,0.0049034143,0.93729156],"study_design_scores_gemma":[0.000323993,0.00024883487,0.0014629539,0.0017939763,0.0006661418,0.0000020864861,0.00022111698,1.2078114e-8,0.0007283549,0.00012375678,0.9941903,0.00023848504],"about_ca_topic_score_codex":0.00010339796,"about_ca_topic_score_gemma":0.00018401603,"teacher_disagreement_score":0.9892869,"about_ca_system_score_codex":0.0000900596,"about_ca_system_score_gemma":0.00021414789,"threshold_uncertainty_score":0.83931637},"labels":[],"label_agreement":null},{"id":"W3047592740","doi":"10.3390/v12080856","title":"Investigation of Novel RNA Elements in the 3′UTR of Tobacco Necrosis Virus-D","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Subgenomic mRNA; RNA; Untranslated region; Biology; Three prime untranslated region; Five prime untranslated region; Genetics; RNA-dependent RNA polymerase; Translation (biology); Messenger RNA; Virology; Gene","score_opus":0.16737805031719538,"score_gpt":0.29777496413228144,"score_spread":0.13039691381508606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047592740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99745756,0.00013868598,5.719597e-7,0.001563386,0.000011739812,0.0001508156,0.00046091698,0.00000881027,0.00020749024],"genre_scores_gemma":[0.99825275,0.0002242797,0.00006563379,0.0013863851,0.0000412587,0.000011500852,0.0000141927285,3.7613964e-7,0.0000036038757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991834,0.00006333695,0.00022717874,0.000118379605,0.00027470232,0.00013296508],"domain_scores_gemma":[0.99952286,0.00027723133,0.00009662699,0.000032806885,0.00003706919,0.00003338051],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021991781,0.00006726013,0.00013374856,0.000010141421,0.000046774192,0.000013260542,0.0002899975,0.000026773456,0.000056225683],"category_scores_gemma":[0.00023645662,0.000021473019,0.000035456433,0.00045532372,0.00010041224,0.000100090125,0.00008978542,0.00006648669,0.000007815271],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026238878,0.00003139486,0.0376392,0.0000072085854,0.000008585213,4.2339008e-7,0.0003583811,0.000002316876,0.9580842,0.00008214789,0.0013584832,0.0024014164],"study_design_scores_gemma":[0.00016350982,0.00021936644,0.2543308,0.00003145684,0.0000053829453,1.582517e-7,0.00053088367,0.000027381844,0.73933446,0.00009662914,0.005189273,0.000070681424],"about_ca_topic_score_codex":0.0014674272,"about_ca_topic_score_gemma":0.0009848169,"teacher_disagreement_score":0.21874973,"about_ca_system_score_codex":0.0000057860384,"about_ca_system_score_gemma":0.0000067613337,"threshold_uncertainty_score":0.22183208},"labels":[],"label_agreement":null},{"id":"W3047809380","doi":"10.3390/v12080861","title":"Vaccine Candidates against Coronavirus Infections. Where Does COVID-19 Stand?","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Université Laval; Centre hospitalier universitaire de Québec; McGill University; Montreal General Hospital","funders":"","keywords":"Virology; Outbreak; Coronavirus; Vaccine trial; Coronavirus disease 2019 (COVID-19); Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Clinical trial; Vaccination; Middle East respiratory syndrome coronavirus; DNA vaccination; Disease; Immunology; Infectious disease (medical specialty); Immunization; Immune system","score_opus":0.11772736612005304,"score_gpt":0.43888618618715064,"score_spread":0.3211588200670976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047809380","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021611892,0.9944795,0.000040083167,0.00027139674,0.00047635465,0.0017650112,0.0006803382,0.00048119496,0.0015900035],"genre_scores_gemma":[0.000020877556,0.9339912,0.000028767074,0.064298555,0.0009302734,0.00036732157,0.00006729936,0.0001652386,0.00013048193],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99645907,0.00029134392,0.00090814475,0.0009545828,0.0007190484,0.0006678089],"domain_scores_gemma":[0.9974047,0.0008422116,0.00033875508,0.00088334986,0.00015117088,0.00037983208],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000349652,0.0007938203,0.0027420658,0.0005483097,0.00028243303,0.00015681151,0.00046206827,0.00053780724,0.00034488665],"category_scores_gemma":[0.0013723865,0.00051082205,0.00065719,0.0011434283,0.00013821601,0.00016822766,0.0003089466,0.0011648417,0.0015331695],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002446259,0.00031072568,0.005341003,0.048065715,0.0010263841,0.0012551427,0.000113891205,1.2510966e-7,0.00012869586,0.0000790167,0.027408723,0.91602594],"study_design_scores_gemma":[0.0012474825,0.000301185,0.0000099855715,0.0055481866,0.0009667879,0.00013130245,0.000043825392,0.000003200759,0.00021163026,0.000029540077,0.99095863,0.00054826465],"about_ca_topic_score_codex":0.0015026528,"about_ca_topic_score_gemma":0.0010049074,"teacher_disagreement_score":0.9635499,"about_ca_system_score_codex":0.0010184116,"about_ca_system_score_gemma":0.005373185,"threshold_uncertainty_score":0.99973434},"labels":[],"label_agreement":null},{"id":"W3047964401","doi":"10.3390/v12080875","title":"Cannabinoid-Induced Immunomodulation during Viral Infections: A Focus on Mitochondria","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"Cannabis and Cannabinoid Research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Neuroprotection; Cannabinoid receptor; Immune system; Context (archaeology); Biology; Cannabinoid; Mitochondrion; Receptor; Neuroscience; Immunology; Cell biology; Genetics","score_opus":0.05839420385346107,"score_gpt":0.36840177036416216,"score_spread":0.3100075665107011,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047964401","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015903468,0.99317163,0.0000045143247,0.00087068405,0.00065580703,0.0022524884,0.00008959372,0.0002510494,0.0011138729],"genre_scores_gemma":[0.00042550135,0.9936925,0.000014781889,0.00021935727,0.0014900705,0.0008468674,0.000082903505,0.00017641216,0.003051597],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970721,0.00020434817,0.0007598308,0.00077132083,0.00064758444,0.00054479064],"domain_scores_gemma":[0.9984442,0.000029979255,0.0002859819,0.0007512244,0.00014132405,0.0003473072],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012833966,0.0006179872,0.0017726239,0.00067176844,0.00024605507,0.00012593949,0.00022688,0.000462664,0.0002918112],"category_scores_gemma":[0.00039642007,0.0004961582,0.00083829206,0.00082920305,0.00006353,0.00013759121,0.0001456613,0.0012130942,0.000838638],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021200694,0.00030885148,0.000015530091,0.009647667,0.00044267497,0.00026263567,0.000062412124,0.0000010574389,0.0013322546,0.00023712,0.012171127,0.9753067],"study_design_scores_gemma":[0.00074737635,0.0010373847,0.00017487821,0.00598418,0.00057475764,0.00019902017,0.000010276536,0.000004034663,0.00058642426,0.000025677367,0.99021906,0.00043695615],"about_ca_topic_score_codex":0.00060578535,"about_ca_topic_score_gemma":0.000029565424,"teacher_disagreement_score":0.9780479,"about_ca_system_score_codex":0.0007847246,"about_ca_system_score_gemma":0.0011962363,"threshold_uncertainty_score":0.9999393},"labels":[],"label_agreement":null},{"id":"W3048617725","doi":"10.3390/v12080878","title":"Structural Insights into Lactococcal Siphophage p2 Baseplate Activation Mechanism","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; French Infrastructure for Integrated Structural Biology; Agence Nationale de la Recherche","keywords":"Random hexamer; Biology; Chemistry; Molecular biology","score_opus":0.024035791905853646,"score_gpt":0.25023255351708007,"score_spread":0.22619676161122643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048617725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973764,0.000007726484,0.000691634,0.00047235886,0.00016353761,0.00015796738,0.0000070131014,0.00008330052,0.0010400614],"genre_scores_gemma":[0.9954276,0.000007542804,0.0005295757,0.003808876,0.00009948589,0.00000919213,0.00000992784,0.000014956437,0.00009286404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993507,0.000029239949,0.00013937069,0.00024177444,0.00009678294,0.00014211051],"domain_scores_gemma":[0.9996854,0.000025025125,0.000059325692,0.00011343338,0.000004837446,0.00011199607],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00001777666,0.00012229671,0.00009922973,0.000017242897,0.00015395501,0.000055249402,0.00013789067,0.00005540202,0.0070663714],"category_scores_gemma":[0.000024366558,0.00010493984,0.00004529785,0.00014138267,0.00004498991,0.0006625656,0.00013631584,0.00013340762,0.0014627789],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031102973,0.000010884288,0.000116218886,0.00000357286,0.0000068808886,0.0000061206865,0.0007917761,0.000067237845,0.99563,0.00017151526,0.00086294464,0.002301711],"study_design_scores_gemma":[0.0002994797,0.00010406451,0.024867015,0.000009806885,0.000012322116,0.0000042586357,0.000094596784,0.0012979662,0.918472,0.00075812655,0.053850856,0.0002295084],"about_ca_topic_score_codex":0.00090771547,"about_ca_topic_score_gemma":0.00013782072,"teacher_disagreement_score":0.077158034,"about_ca_system_score_codex":0.00007125507,"about_ca_system_score_gemma":0.00000598725,"threshold_uncertainty_score":0.9993147},"labels":[],"label_agreement":null},{"id":"W3049021040","doi":"10.3390/v12080895","title":"A Comparison of Whole Genome Sequencing of SARS-CoV-2 Using Amplicon-Based Sequencing, Random Hexamers, and Bait Capture","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vector Institute; University of Manitoba; Public Health Agency of Canada; University of Toronto; University Health Network; Dalhousie University; Health Sciences Centre; Sunnybrook Health Science Centre; Perimeter Institute; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Toronto","keywords":"Amplicon; Genome; Biology; Multiplex; Multiple displacement amplification; Computational biology; DNA sequencing; Polymerase chain reaction; Genetics; Virology; Gene; DNA extraction","score_opus":0.20256580697731172,"score_gpt":0.4022353769418807,"score_spread":0.199669569964569,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049021040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99478203,0.002520205,0.0016342199,0.00015363262,0.00003156485,0.00046907406,0.00006521711,0.00005292192,0.00029110612],"genre_scores_gemma":[0.9667871,0.0000032868231,0.0010085844,0.03206208,0.000087325054,0.000007870386,0.0000049254454,0.000037644666,0.0000011917289],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982003,0.00010083662,0.00052848976,0.000372439,0.00046869979,0.00032925417],"domain_scores_gemma":[0.9989973,0.00022501702,0.00023071178,0.00030310277,0.00017773431,0.000066189226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002691505,0.00022449662,0.00084432465,0.00019404145,0.000066529734,0.000025096884,0.00016057065,0.00013832688,0.000011932313],"category_scores_gemma":[0.00033628554,0.00019817575,0.0001289548,0.00043987934,0.00029151136,0.0001049264,0.00007665974,0.00030682093,0.000009827541],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074702234,0.000047366295,0.074579686,0.0006228109,0.00009017066,0.00003419357,0.0020005053,0.00006540956,0.92153084,0.000014266853,0.00008573342,0.00018199692],"study_design_scores_gemma":[0.0039020889,0.00034437104,0.00052754616,0.00023114587,0.00013747795,0.00001118197,0.0012632263,0.012083745,0.97020364,0.000014445621,0.011100462,0.00018065261],"about_ca_topic_score_codex":0.0029555294,"about_ca_topic_score_gemma":0.000057553494,"teacher_disagreement_score":0.07405214,"about_ca_system_score_codex":0.00016647189,"about_ca_system_score_gemma":0.00078943674,"threshold_uncertainty_score":0.80813724},"labels":[],"label_agreement":null},{"id":"W3049398156","doi":"10.3390/v12080900","title":"Characterization of Signal Sequences Determining the Nuclear/Nucleolar Import and Nuclear Export of the Caprine Arthritis-Encephalitis Virus Rev Protein","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université du Québec à Montréal","funders":"","keywords":"Nuclear localization sequence; NLS; Nuclear transport; Nuclear export signal; Nucleolus; Biology; Nuclear protein; Transfection; Viral protein; Cell nucleus; Immunoprecipitation; Virus; Cell biology; Molecular biology; Virology; Gene; Cytoplasm; Biochemistry","score_opus":0.019280015776367728,"score_gpt":0.22220952585285134,"score_spread":0.2029295100764836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049398156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992693,0.0001723507,0.00000857185,0.00016525872,0.000033048964,0.00018528766,0.00006801996,0.0000064216883,0.00009172824],"genre_scores_gemma":[0.99846774,0.000444643,0.000047694837,0.0009164335,0.00007975132,0.0000057120524,0.000010217658,0.000014308341,0.000013503715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992851,0.00005398574,0.00025272678,0.00018743181,0.000118374424,0.00010236135],"domain_scores_gemma":[0.9995207,0.0000049401674,0.00019597849,0.00017824635,0.00006479815,0.000035306668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008684859,0.00009819263,0.00013238628,0.000011396395,0.00007594118,0.000019230494,0.0002192113,0.000062866835,0.000053403677],"category_scores_gemma":[0.000049809372,0.00006612756,0.000056354907,0.000064556756,0.00019880243,0.000015081379,0.00014547563,0.00006403167,0.0000027426956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045642846,0.000014845456,0.004853035,0.000019882193,0.000020035604,0.0000015219185,0.0003454714,7.1070724e-7,0.9918418,0.000042202584,0.0000357024,0.0027791848],"study_design_scores_gemma":[0.00017092086,0.00036811252,0.027598765,0.00007101764,0.0000123137,0.0000066792895,0.00017789277,0.000028442419,0.9647341,0.0000110936635,0.006724683,0.000096024756],"about_ca_topic_score_codex":0.00006215375,"about_ca_topic_score_gemma":0.000011022263,"teacher_disagreement_score":0.027107712,"about_ca_system_score_codex":0.0000022508514,"about_ca_system_score_gemma":0.000034597364,"threshold_uncertainty_score":0.26966038},"labels":[],"label_agreement":null},{"id":"W3080832262","doi":"10.3390/v12090941","title":"Molecular Characterization of Hemorrhagic Enteritis Virus (HEV) Obtained from Clinical Samples in Western Canada 2017–2018","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Mitacs; Alberta Agriculture and Forestry","keywords":"Flock; Virology; Vaccination; Biology; Enteritis; Virus; Viral shedding; Virulence; Hepatitis E virus; Microbiology; Gene; Genotype; Genetics","score_opus":0.09839611510649139,"score_gpt":0.3517060814814431,"score_spread":0.25330996637495173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080832262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944848,0.00019149978,0.00066628854,0.0034259507,0.00014280759,0.00022075193,0.0008136536,0.000022345985,0.000031924515],"genre_scores_gemma":[0.9842484,0.00057325786,0.00037370741,0.014193295,0.00020165624,0.000010950223,0.00036859108,0.000019633397,0.0000105329855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981674,0.00028592322,0.0006801242,0.0003223424,0.00022457869,0.000319627],"domain_scores_gemma":[0.9992443,0.00006198244,0.00013787115,0.00021138847,0.000053175296,0.00029130833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016420589,0.0001399249,0.00060597487,0.000052796844,0.000016996637,0.000008987238,0.00015022536,0.00008547738,0.00019745203],"category_scores_gemma":[0.0008451523,0.00013287755,0.00008007914,0.00012182644,0.00010504518,0.00008457542,0.00009408696,0.00021585295,0.000022488326],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058184046,0.000074310585,0.5418297,0.00004558232,0.000040919167,0.00044711452,0.00003214559,0.0000013216937,0.45412546,0.0000033994186,0.0009946885,0.0018234764],"study_design_scores_gemma":[0.002089249,0.0008314162,0.9568798,0.00016392262,0.000026046771,0.000019728963,0.000040773626,0.00029743797,0.023154868,0.000014907329,0.016357549,0.00012432132],"about_ca_topic_score_codex":0.2203314,"about_ca_topic_score_gemma":0.14254992,"teacher_disagreement_score":0.4309706,"about_ca_system_score_codex":0.000054018787,"about_ca_system_score_gemma":0.00023350785,"threshold_uncertainty_score":0.8730963},"labels":[],"label_agreement":null},{"id":"W3081837101","doi":"10.3390/v12090955","title":"Evaluation of the 50% Infectious Dose of Human Norovirus Cin-2 in Gnotobiotic Pigs: A Comparison of Classical and Contemporary Methods for Endpoint Estimation","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Norovirus; Estimation; Virology; Biology; Virus; Engineering","score_opus":0.2912192500112953,"score_gpt":0.5115037173428796,"score_spread":0.2202844673315843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081837101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935685,0.0006206297,0.0041401503,0.0006461236,0.000026990307,0.0008669915,0.000025069856,0.0000068037357,0.00009875485],"genre_scores_gemma":[0.9962652,0.000013512192,0.0034127734,0.00023733536,0.000020453957,0.000033327018,0.000009535743,0.00000685723,0.0000010497806],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982739,0.00075416005,0.0005293715,0.00013164524,0.00020397891,0.00010692149],"domain_scores_gemma":[0.9992056,0.00022896018,0.0002344186,0.000119635624,0.00015454761,0.00005687832],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001444846,0.000072522715,0.0004679726,0.000076965036,0.000019879775,0.0000023095756,0.000055620207,0.000057321813,0.000014162955],"category_scores_gemma":[0.004027676,0.00005207747,0.00006640149,0.000109701534,0.00019978882,0.00005195252,0.000050221857,0.00011964112,3.0765685e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001069417,0.0003242343,0.36770675,0.0005364833,0.00007860585,4.1982196e-7,0.00066801655,0.00023149357,0.5959984,0.00018758883,0.00046442985,0.032734126],"study_design_scores_gemma":[0.0072878012,0.0053954585,0.72143215,0.00037640703,0.00019668536,0.0000044028607,0.00036620515,0.13003767,0.13336357,0.0012222365,0.00023569197,0.00008174169],"about_ca_topic_score_codex":0.00030047548,"about_ca_topic_score_gemma":0.00010820569,"teacher_disagreement_score":0.46263486,"about_ca_system_score_codex":0.000033254044,"about_ca_system_score_gemma":0.00011297478,"threshold_uncertainty_score":0.48217952},"labels":[],"label_agreement":null},{"id":"W3088340986","doi":"10.3390/v12101079","title":"Regulation of Expression and Latency in BLV and HTLV","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg; University of Manitoba","funders":"","keywords":"Latency (audio); Virology; Biology; Computational biology; Computer science; Telecommunications","score_opus":0.045434285760875825,"score_gpt":0.2952193285835359,"score_spread":0.24978504282266006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088340986","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011203659,0.99822676,9.0765144e-7,0.000010465607,0.00014291918,0.00018744206,0.000034368484,0.00001536505,0.00026140446],"genre_scores_gemma":[0.0021822546,0.99744964,0.00001877741,0.000015273654,0.000018000917,0.00001166869,0.00001964072,0.000011137054,0.00027363328],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992445,0.0001221428,0.00029575426,0.00021636683,0.000014857977,0.00010638022],"domain_scores_gemma":[0.9996052,0.00011752995,0.00016641174,0.000091706526,0.000010137208,0.0000090416315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058219073,0.00016656838,0.000803707,0.00009988823,0.000048452974,0.0000036693275,0.00005614258,0.00028002416,0.00004645672],"category_scores_gemma":[0.000040800383,0.00011054015,0.00005157168,0.00008517489,0.0001576669,0.000036206988,0.00013576358,0.00017781291,0.00003241156],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029638453,0.000038767244,0.0005767604,0.005478054,0.00012620784,0.0000037977627,0.00036719494,3.277406e-8,0.038364474,0.00022670827,0.0009558922,0.95383245],"study_design_scores_gemma":[0.00022105288,0.00005786185,0.00037536543,0.00330185,0.00011600801,0.000010067235,0.000027369162,4.21405e-8,0.0013618834,0.000056140663,0.99435216,0.000120192526],"about_ca_topic_score_codex":0.000057005567,"about_ca_topic_score_gemma":0.000010841699,"teacher_disagreement_score":0.9933963,"about_ca_system_score_codex":0.000007709256,"about_ca_system_score_gemma":0.000024414352,"threshold_uncertainty_score":0.45076966},"labels":[],"label_agreement":null},{"id":"W3088684406","doi":"10.3390/v12101104","title":"Interaction of Human ACE2 to Membrane-Bound SARS-CoV-1 and SARS-CoV-2 S Glycoproteins","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Mitacs; Fondation du CHUM","keywords":"Glycoprotein; Coronavirus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Cooperativity; Spike (software development); Viral entry; Plasma protein binding; Receptor; Angiotensin-converting enzyme 2; Cooperative binding; Virology; Coronavirus disease 2019 (COVID-19); Chemistry; Biophysics; Binding site; Virus; Biology; Biochemistry; Medicine; Viral replication; Disease","score_opus":0.13011652986586286,"score_gpt":0.40658476810561295,"score_spread":0.2764682382397501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088684406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948314,0.00024400733,0.00007277796,0.0011727563,0.00010997843,0.0007306674,0.000023410257,0.00012327555,0.002691747],"genre_scores_gemma":[0.89200073,0.000006038661,0.00014722063,0.10745938,0.0002804379,0.000044693217,0.00000279788,0.000047833262,0.000010853659],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981658,0.000070275615,0.00041413133,0.0004929041,0.00049682293,0.00036005044],"domain_scores_gemma":[0.9992048,0.00008634604,0.00010658839,0.00038794466,0.00014988238,0.00006439804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019271759,0.00024797142,0.0004947349,0.0002577034,0.000114580034,0.00007433394,0.000210376,0.000113218935,0.00002180158],"category_scores_gemma":[0.00038050243,0.00022429472,0.00010969115,0.0004935299,0.00015886416,0.0002612633,0.00019539525,0.00033407798,0.00026120836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009917784,0.00014141435,0.00563063,0.0003361763,0.00009747883,0.00006639089,0.0012460446,1.4643378e-7,0.9870383,0.00015236434,0.0025754103,0.0017238571],"study_design_scores_gemma":[0.0011750254,0.0008804573,0.00077124254,0.00013900937,0.000051245785,0.000022068405,0.00020782292,0.000048039317,0.8237376,0.00005329383,0.17274332,0.00017087303],"about_ca_topic_score_codex":0.0018480457,"about_ca_topic_score_gemma":0.00043182267,"teacher_disagreement_score":0.17016791,"about_ca_system_score_codex":0.00008036929,"about_ca_system_score_gemma":0.00013422461,"threshold_uncertainty_score":0.91464734},"labels":[],"label_agreement":null},{"id":"W3088813247","doi":"10.3390/v12101096","title":"Chicken Astrovirus (CAstV) Molecular Studies Reveal Evidence of Multiple Past Recombination Events in Sequences Originated from Clinical Samples of White Chick Syndrome (WCS) in Western Canada","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; University of Guelph; University of Calgary","funders":"Mitacs; Alberta Agriculture and Forestry","keywords":"Biology; GenBank; Recombination; Genetics; Phylogenetic tree; Astrovirus; Genome; Whole genome sequencing; Virology; Gene; Virus; Norovirus","score_opus":0.18614150041909275,"score_gpt":0.35752544308958645,"score_spread":0.1713839426704937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088813247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960528,0.0016666347,9.5684e-7,0.0011447007,0.00008158853,0.00031186812,0.00072255783,0.000015450081,0.0000034408883],"genre_scores_gemma":[0.99844474,0.001135224,0.00009962574,0.00022215759,0.00003338298,0.000021269745,0.000036011825,0.0000017506777,0.0000058226788],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99743205,0.0005411096,0.00082552806,0.00038278606,0.0005154972,0.0003030375],"domain_scores_gemma":[0.99765074,0.0017400297,0.00031496317,0.00007364138,0.00012446102,0.00009619055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000542301,0.00018767365,0.0006391173,0.00003631811,0.00006542274,0.000008366687,0.00044149044,0.000076764074,0.000022377171],"category_scores_gemma":[0.0017559116,0.00009113974,0.00006457522,0.0006453059,0.00016173713,0.00024208901,0.0003126885,0.0002326586,0.000003777782],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016994817,0.0000783588,0.86192507,0.00004456317,0.00005793879,0.000043622225,0.00025037635,0.00006139761,0.13614343,0.0000017176077,0.00007997029,0.0011435888],"study_design_scores_gemma":[0.0003484307,0.00047410018,0.9861878,0.00057269505,0.00001042552,0.0000013881034,0.0007157932,0.00004107751,0.011186438,0.0000665495,0.00023925594,0.00015604218],"about_ca_topic_score_codex":0.33962244,"about_ca_topic_score_gemma":0.6598897,"teacher_disagreement_score":0.32026726,"about_ca_system_score_codex":0.00008097694,"about_ca_system_score_gemma":0.00008846493,"threshold_uncertainty_score":0.6647751},"labels":[],"label_agreement":null},{"id":"W3088914026","doi":"10.3390/v12101142","title":"A Diverse Virome of Leafroll-Infected Grapevine Unveiled by dsRNA Sequencing","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Sherbrooke; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Human virome; Biology; Cultivar; Plant virus; Viroid; Interspecific competition; Virus; Virology; Botany; Genetics; Metagenomics; Gene","score_opus":0.08900211000254075,"score_gpt":0.26447671676370127,"score_spread":0.1754746067611605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088914026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970649,0.00044586818,0.000001297493,0.0007250209,0.000024836685,0.00014825998,0.0011672801,0.00010095187,0.0003216157],"genre_scores_gemma":[0.9984342,0.00044539294,0.000018010322,0.000913963,0.00008728215,0.000008080603,0.00004256557,9.4053564e-7,0.00004960503],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894977,0.00007999557,0.0001865562,0.00023400667,0.00028463046,0.0002650554],"domain_scores_gemma":[0.99942845,0.00026554381,0.000081737184,0.00003811527,0.000054171378,0.0001319738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009465094,0.00012986864,0.00024598197,0.0000115997755,0.00013387062,0.00002384332,0.00025243397,0.000048229933,0.00056281994],"category_scores_gemma":[0.00031337363,0.000048484475,0.000074405965,0.0004808034,0.00011174213,0.00014627026,0.00018327452,0.00011055535,0.00011063259],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058249883,0.000029148852,0.0043411306,0.0000107460055,0.00003640458,0.0000090817,0.00009135099,0.0000019089998,0.9818282,0.000012010335,0.01033665,0.0032451157],"study_design_scores_gemma":[0.000706712,0.0011661208,0.06781779,0.00006436796,0.000046514437,0.0000040021864,0.0012523691,0.0001972751,0.824973,0.000109710396,0.10314096,0.00052115705],"about_ca_topic_score_codex":0.0007886013,"about_ca_topic_score_gemma":0.00020025641,"teacher_disagreement_score":0.15685518,"about_ca_system_score_codex":0.000020477672,"about_ca_system_score_gemma":0.00001008488,"threshold_uncertainty_score":0.6162484},"labels":[],"label_agreement":null},{"id":"W3092619105","doi":"10.3390/v12101139","title":"In Vitro Combinations of Baloxavir Acid and Other Inhibitors against Seasonal Influenza A Viruses","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Favipiravir; Oseltamivir; In vitro; Neuraminidase; Drug; Pharmacology; Virology; Medicine; Influenza A virus; In vivo; Virus; Biology; Coronavirus disease 2019 (COVID-19); Internal medicine; Biochemistry; Biotechnology; Disease","score_opus":0.1137864217233531,"score_gpt":0.37888824072427285,"score_spread":0.2651018190009198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092619105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931437,0.00323302,0.0000069885914,0.0010669573,0.00004195795,0.00043353377,0.00018088869,0.000059707887,0.0018332797],"genre_scores_gemma":[0.958809,0.0001620846,0.00034046493,0.040472195,0.00011678002,0.000047482095,0.0000024693186,0.000033658645,0.000015836844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984997,0.000080622405,0.00039368772,0.00028021092,0.00044155793,0.0003042207],"domain_scores_gemma":[0.9992537,0.00016946567,0.00009293911,0.00017408501,0.00011406213,0.0001957872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017597547,0.00019225247,0.00042779866,0.00021145334,0.000074378615,0.000020647318,0.00010328826,0.0000853415,0.00006672874],"category_scores_gemma":[0.0010066334,0.00016775727,0.00007001276,0.00050565257,0.00034894378,0.00023592578,0.00017446213,0.00027251348,0.000062239465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012431088,0.0004424162,0.1532845,0.00025020767,0.000159451,0.0000476318,0.0023302769,0.000007988112,0.83607763,0.00064018666,0.003219013,0.0022975868],"study_design_scores_gemma":[0.006626115,0.0003913876,0.026490532,0.00019973374,0.000052969408,0.000004459714,0.00062743877,0.00019543618,0.7702315,0.00011815328,0.1947882,0.00027409772],"about_ca_topic_score_codex":0.0001585455,"about_ca_topic_score_gemma":0.000020532249,"teacher_disagreement_score":0.1915692,"about_ca_system_score_codex":0.000052571486,"about_ca_system_score_gemma":0.00011890861,"threshold_uncertainty_score":0.6840943},"labels":[],"label_agreement":null},{"id":"W3092650667","doi":"10.3390/v12101179","title":"Zinc and Copper Ions Differentially Regulate Prion-Like Phase Separation Dynamics of Pan-Virus Nucleocapsid Biomolecular Condensates","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Virus; Viral replication; RNA; Stress granule; Biology; Cell biology; Chemistry; Infectivity; Organelle; Virology; Biophysics; Gene; Biochemistry; Messenger RNA; Translation (biology)","score_opus":0.02338050363519557,"score_gpt":0.3176184039878906,"score_spread":0.29423790035269504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092650667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967862,0.00080571155,0.001686664,0.00031617374,0.000037366553,0.00017558513,0.00011838483,0.000015448431,0.000058470414],"genre_scores_gemma":[0.9983605,0.00052824704,0.00023164699,0.00051973463,0.000053883316,0.0000066619773,0.00017732423,0.000020432315,0.000101551304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991415,0.00006130371,0.00019818812,0.00027158932,0.0001412318,0.00018617536],"domain_scores_gemma":[0.99953306,0.0000129547125,0.00007352216,0.00017773795,0.000073191375,0.00012952865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006457638,0.00012986828,0.00016303177,0.000035425503,0.000077793935,0.000037455175,0.00011458314,0.00009853503,0.00002391566],"category_scores_gemma":[0.00007178237,0.00011929238,0.000056089164,0.00008422824,0.00013480628,0.000008625311,0.000114266906,0.00006411557,0.0000069939692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028523096,0.00007207,0.00056776794,0.00003050754,0.00007120032,0.000005799925,0.00004640481,0.000013354463,0.9962225,0.0001841692,0.0007162856,0.001784743],"study_design_scores_gemma":[0.0011793597,0.0007622178,0.000598925,0.000015815363,0.000028896498,0.0000054134,0.000057476722,0.004909484,0.9888566,0.00004682441,0.003373538,0.00016546005],"about_ca_topic_score_codex":0.00008155833,"about_ca_topic_score_gemma":0.00013658871,"teacher_disagreement_score":0.0073658773,"about_ca_system_score_codex":0.0000073863453,"about_ca_system_score_gemma":0.0000525488,"threshold_uncertainty_score":0.4864602},"labels":[],"label_agreement":null},{"id":"W3092684668","doi":"10.3390/v12101164","title":"Amplicon-Based Detection and Sequencing of SARS-CoV-2 in Nasopharyngeal Swabs from Patients With COVID-19 and Identification of Deletions in the Viral Genome That Encode Proteins Involved in Interferon Antagonism","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; U.S. Food and Drug Administration; Hamilton Health Sciences Foundation; King Fahad Medical City; Biotechnology and Biological Sciences Research Council; Public Health England; National Institute for Health and Care Research; National Institute for Health Research Health Protection Research Unit; University of Liverpool; Wellcome Trust","keywords":"Amplicon; Biology; Genome; Minion; Virology; Genetics; Coronavirus; DNA sequencing; Computational biology; Polymerase chain reaction; Gene; Nanopore sequencing; Coronavirus disease 2019 (COVID-19); Medicine; Disease; Infectious disease (medical specialty)","score_opus":0.09573910230631716,"score_gpt":0.3344596861896819,"score_spread":0.23872058388336476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092684668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99754435,0.00019262587,0.0009411258,0.00019537433,0.00001172836,0.0010274065,0.000068336,0.000013453825,0.0000055998858],"genre_scores_gemma":[0.99059224,0.000007437298,0.00006697854,0.009190924,0.000015152939,0.00009936089,0.000014790947,0.000013038488,5.7067457e-8],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875844,0.00015927874,0.0003667081,0.0002901435,0.00027122238,0.00015419186],"domain_scores_gemma":[0.9994281,0.00018103968,0.00013862604,0.00017752626,0.000048149508,0.00002657222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003009411,0.00012284618,0.0002598122,0.00029204472,0.000034607416,0.000022984821,0.00010827771,0.00007491316,9.987405e-7],"category_scores_gemma":[0.00023289192,0.000094460556,0.00002148762,0.0003839584,0.00016510075,0.00016362578,0.000039715826,0.00021822963,8.1109397e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008447919,0.00008463302,0.37171063,0.00014402295,0.000007966167,0.0000071298177,0.0023469944,0.0000068900654,0.6246303,0.0000047033213,4.075494e-7,0.00021155775],"study_design_scores_gemma":[0.0028400524,0.00056349963,0.24136348,0.00008765745,0.0000157454,6.92818e-7,0.00074490614,0.0012122554,0.7529403,0.000088509834,0.000064805936,0.00007808995],"about_ca_topic_score_codex":0.009845875,"about_ca_topic_score_gemma":0.006534304,"teacher_disagreement_score":0.13034716,"about_ca_system_score_codex":0.00017375402,"about_ca_system_score_gemma":0.00023508085,"threshold_uncertainty_score":0.9967477},"labels":[],"label_agreement":null},{"id":"W3093168524","doi":"10.3390/v12101170","title":"The Unconventional Viruses of Ichneumonid Parasitoid Wasps","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada","funders":"","keywords":"Biology; Parasitoid; Parasitoid wasp; Genome; Virology; Evolutionary biology; Ichneumonidae; Hymenoptera; Zoology; Gene; Genetics","score_opus":0.06468445691157138,"score_gpt":0.30846987315503516,"score_spread":0.24378541624346378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093168524","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036352553,0.9972266,4.86235e-7,0.00013732635,0.00048736873,0.0002946153,0.0006184224,0.00004482999,0.0008268246],"genre_scores_gemma":[0.00064284273,0.9981721,0.000003091465,0.00022939546,0.0005924208,0.000083058076,0.00006538878,0.000002124232,0.00020955884],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99865335,0.00016392236,0.0005011647,0.0002557927,0.00021885995,0.00020692074],"domain_scores_gemma":[0.99836886,0.0010506592,0.00038670615,0.00008040823,0.00005546571,0.000057922774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000117794174,0.00024686405,0.0006675714,0.000012871887,0.00030291514,0.000091401394,0.00047754063,0.0001368099,0.0004642284],"category_scores_gemma":[0.00007040678,0.00006687576,0.0005344637,0.00025853215,0.000077584955,0.000077723416,0.00007120273,0.00024129059,0.00036127336],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000175191,0.00004416219,0.000020517731,0.00018883232,0.0001354558,0.000006274523,0.0000038139963,9.187654e-8,0.00094128744,0.001753212,0.0025284456,0.9943604],"study_design_scores_gemma":[0.000027829332,0.000104281775,0.00003800021,0.0007136308,0.0001385497,0.00002278613,0.000021112406,9.084029e-7,0.0001130706,0.00009315151,0.9985701,0.00015657354],"about_ca_topic_score_codex":0.00021752027,"about_ca_topic_score_gemma":0.0002923273,"teacher_disagreement_score":0.99604166,"about_ca_system_score_codex":0.000022733857,"about_ca_system_score_gemma":0.00004920837,"threshold_uncertainty_score":0.5082975},"labels":[],"label_agreement":null},{"id":"W3094583575","doi":"10.3390/v12111204","title":"Seasonal Regime Shift in the Viral Communities of a Permafrost Thaw Lake","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval","funders":"","keywords":"Permafrost; Subarctic climate; Thermokarst; Ecology; Biogeochemical cycle; Environmental science; Arctic; Metagenomics; Biome; Microbial population biology; Phototroph; Biogeochemistry; Archaea; Plankton; Microbial loop; Ecosystem; Biology; Food web","score_opus":0.034720441287993814,"score_gpt":0.25950108011470985,"score_spread":0.22478063882671603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3094583575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925494,0.000022429853,0.000009845713,0.0017388075,0.000034983976,0.000067867484,0.000321492,0.00001065173,0.005244498],"genre_scores_gemma":[0.9949728,0.000016582548,0.000042274605,0.0048819273,0.000026130778,0.0000049412674,0.000014825038,0.0000047216918,0.000035780733],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99960655,0.000065497145,0.00009656111,0.00006103193,0.00007558993,0.00009478599],"domain_scores_gemma":[0.9997702,0.000056076544,0.000032679363,0.00011701262,0.0000016663446,0.000022361892],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000054941593,0.000058010417,0.00007165612,0.000007721956,0.000058038397,0.000024400995,0.00023581425,0.000020231677,0.004689205],"category_scores_gemma":[0.000007969937,0.000041318912,0.000034888897,0.0000847657,0.00015939765,0.00018055427,0.000112685026,0.00012241387,0.00023448656],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014330189,0.00031288085,0.26832807,0.000025555759,0.000022706072,0.000020504982,0.045942675,0.00013114918,0.6577987,0.0011013491,0.024338653,0.0018344114],"study_design_scores_gemma":[0.00017906971,0.0000840105,0.8159155,0.000017704004,0.000008632875,0.0000065450654,0.0028837144,0.000058593363,0.004272387,0.00006665974,0.17641127,0.0000958873],"about_ca_topic_score_codex":0.0017425253,"about_ca_topic_score_gemma":0.010248935,"teacher_disagreement_score":0.65352637,"about_ca_system_score_codex":0.000007394222,"about_ca_system_score_gemma":0.000004293206,"threshold_uncertainty_score":0.99622065},"labels":[],"label_agreement":null},{"id":"W3094910255","doi":"10.3390/v12111266","title":"JSRV Intragenic Enhancer Element Increases Expression from a Heterologous Promoter and Promotes High Level AAV-Mediated Transgene Expression in the Lung and Liver of Mice","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada","keywords":"Transgene; Enhancer; Heterologous; Biology; Genetically modified mouse; Molecular biology; Heterologous expression; Gene expression; Virology; Gene; Genetics; Recombinant DNA","score_opus":0.049098950992073974,"score_gpt":0.28964714984100143,"score_spread":0.24054819884892745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3094910255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99567515,0.0029756238,0.00013458628,0.00014876903,0.000039213024,0.00062642887,0.00034964812,0.000038456357,0.000012114695],"genre_scores_gemma":[0.99776554,0.00055590615,0.00029659987,0.0011064212,0.00009265142,0.00011786615,0.000043794884,0.000019842902,0.0000013496673],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986776,0.00033662218,0.00028779305,0.0003502156,0.00013603597,0.0002117292],"domain_scores_gemma":[0.99934787,0.00028561594,0.0001103237,0.00015109262,0.000026000816,0.00007909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000109692875,0.00018722237,0.0002664449,0.000053608182,0.00007240122,0.000023973158,0.0001264,0.000112995105,0.00035015176],"category_scores_gemma":[0.00007794648,0.00012660821,0.000040370498,0.00008367688,0.00008986489,0.0001460246,0.00011391544,0.00013756072,0.0000055692194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012648734,0.00025706043,0.008330171,0.00014397739,0.000041387088,0.00009238152,0.0037623676,0.0000017488076,0.98482054,0.000004511465,0.0004187101,0.0008622779],"study_design_scores_gemma":[0.003649187,0.0029840388,0.26101506,0.00031309022,0.00019551841,0.000049227372,0.00045368169,0.000741795,0.7293425,0.00016271153,0.0006642373,0.00042892696],"about_ca_topic_score_codex":0.0013196571,"about_ca_topic_score_gemma":0.000103544626,"teacher_disagreement_score":0.255478,"about_ca_system_score_codex":0.0000137023435,"about_ca_system_score_gemma":0.000024123701,"threshold_uncertainty_score":0.5162933},"labels":[],"label_agreement":null},{"id":"W3096248042","doi":"10.3390/v12111214","title":"Antibody Binding to SARS-CoV-2 S Glycoprotein Correlates with but Does Not Predict Neutralization","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Héma-Québec; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"U.S. Military HIV Research Program","keywords":"Neutralization; Glycoprotein; Monoclonal antibody; Antibody; Virology; Context (archaeology); Chemistry; Recombinant DNA; Neutralizing antibody; Molecular biology; Biology; Biochemistry; Immunology; Gene","score_opus":0.06426060527803679,"score_gpt":0.3572579547431292,"score_spread":0.2929973494650924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3096248042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99472237,0.00008493859,0.001893208,0.0012844218,0.00011671154,0.0008953279,0.000060082362,0.00029911034,0.0006438621],"genre_scores_gemma":[0.88362324,0.0000066581892,0.0002956901,0.11562806,0.00029585732,0.00005216984,0.000014578967,0.000056689096,0.000027047648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823177,0.000050790135,0.00027473786,0.00047327907,0.000554306,0.000415104],"domain_scores_gemma":[0.9993406,0.00008391149,0.00006963898,0.0002903667,0.00012679368,0.000088667824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013699799,0.00023255358,0.00033694768,0.00020733867,0.00012092185,0.00009408954,0.00019690972,0.00011557993,0.000019112556],"category_scores_gemma":[0.00030118643,0.00015462283,0.00006379309,0.00069211377,0.00009394323,0.00022650875,0.00009465872,0.000261471,0.00048439388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001255899,0.00006718336,0.14396724,0.00013552218,0.000064491294,0.00013675903,0.00048662713,0.000003331209,0.85303026,0.000084464664,0.00031335428,0.00045488705],"study_design_scores_gemma":[0.0012222761,0.0010176538,0.002263781,0.00021399453,0.000062239196,0.000018304154,0.00017153817,0.0004908396,0.9506048,0.000010868552,0.04371772,0.00020599303],"about_ca_topic_score_codex":0.00049069885,"about_ca_topic_score_gemma":0.000052682182,"teacher_disagreement_score":0.14170346,"about_ca_system_score_codex":0.000058436235,"about_ca_system_score_gemma":0.00018590502,"threshold_uncertainty_score":0.63053364},"labels":[],"label_agreement":null},{"id":"W3097299934","doi":"10.3390/v12111272","title":"In Vitro and In Ovo Host Restriction of Aquatic Bird Bornavirus 1 in Different Avian Hosts","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"In ovo; Biology; Goose; Embryonated; Virology; Host (biology); Waterfowl; Embryo; Virus; Genetics; Ecology","score_opus":0.037167486889499946,"score_gpt":0.29851884024548453,"score_spread":0.2613513533559846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097299934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971409,0.0010477349,0.0000027061212,0.0014865922,0.000038319995,0.00020937253,0.000013519271,0.000020446194,0.000040445502],"genre_scores_gemma":[0.9972304,0.00047300314,0.000014929896,0.002209208,0.00004250238,0.000009872264,0.0000037844854,0.000011947716,0.00000434378],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992663,0.00007423307,0.00025481332,0.00017470408,0.00009008455,0.00013984079],"domain_scores_gemma":[0.99970657,0.00006971868,0.00004783261,0.00009042302,0.0000051818165,0.00008024796],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004780568,0.00010014057,0.00027894595,0.00020071305,0.000009928677,0.000003384571,0.000038258335,0.00007875266,0.000024173385],"category_scores_gemma":[0.00023575296,0.00008312585,0.000024474835,0.00027689055,0.00005958228,0.00008909384,0.000028164839,0.00016461438,0.000016470829],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017172007,0.00023914293,0.73324037,0.00007321756,0.0000068935396,0.000101310674,0.0002565116,0.000001978821,0.26364627,0.000019526089,0.000055962457,0.00064163347],"study_design_scores_gemma":[0.0018999546,0.00029405043,0.96045625,0.000102928956,0.000022042293,0.0000016556089,0.00008499626,0.00021236172,0.036646854,0.00010475205,0.00010496857,0.000069202506],"about_ca_topic_score_codex":0.00091999484,"about_ca_topic_score_gemma":0.0003884617,"teacher_disagreement_score":0.22721589,"about_ca_system_score_codex":0.00002715219,"about_ca_system_score_gemma":0.000026631946,"threshold_uncertainty_score":0.3389774},"labels":[],"label_agreement":null},{"id":"W3097407122","doi":"10.3390/v12111268","title":"VIRIDIC—A Novel Tool to Calculate the Intergenomic Similarities of Prokaryote-Infecting Viruses","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":795,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Genome; Biology; Similarity (geometry); Genetics; Computational biology; Prokaryote; Virus classification; Evolutionary biology; Gene; Computer science; Artificial intelligence","score_opus":0.043377874520851546,"score_gpt":0.2746186067835234,"score_spread":0.23124073226267186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097407122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961298,0.000021503287,0.0012870864,0.0011029397,0.00022727982,0.00025365094,0.00007122668,0.00004982143,0.00085668365],"genre_scores_gemma":[0.99039733,0.000009797315,0.0006254049,0.008720849,0.00012667448,0.000015909263,0.0000012202034,0.00001991988,0.00008287964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918133,0.000028328921,0.00026650075,0.00022828396,0.00009928962,0.00019628904],"domain_scores_gemma":[0.9995747,0.0000694007,0.00008792307,0.00018732701,0.000008931848,0.00007168709],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000943932,0.00013331375,0.00015033122,0.00001972667,0.00013732741,0.0000511113,0.00026475632,0.000036265534,0.0018650495],"category_scores_gemma":[0.000117381904,0.00009854755,0.000084998064,0.00018400986,0.000109004504,0.00025622785,0.00036906154,0.00013289697,0.00061458466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003554851,0.000040953197,0.0012805423,0.000009355026,0.000020309917,0.000001361553,0.0015406434,0.00078870397,0.9918605,0.000034754794,0.0028065685,0.0015807615],"study_design_scores_gemma":[0.00023776716,0.00019205049,0.02963069,0.00004543198,0.00003993088,0.000011399513,0.0005368163,0.00029682665,0.7272205,0.000021698339,0.24148224,0.00028468747],"about_ca_topic_score_codex":0.0017419053,"about_ca_topic_score_gemma":0.00020721498,"teacher_disagreement_score":0.26464003,"about_ca_system_score_codex":0.00005041262,"about_ca_system_score_gemma":0.00001051072,"threshold_uncertainty_score":0.9990474},"labels":[],"label_agreement":null},{"id":"W3097696837","doi":"10.3390/v12111242","title":"Curcumin as an Antiviral Agent","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"Curcumin's Biomedical Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":203,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Curcumin; Curcuminoid; Antimicrobial; Broad spectrum; Limiting; Pharmacology; Biology; Computational biology; Virology; Chemistry; Combinatorial chemistry; Microbiology; Engineering","score_opus":0.062107437504717714,"score_gpt":0.3859323253066999,"score_spread":0.3238248878019822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097696837","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008085098,0.9976103,0.00020184292,0.00005829355,0.0001476735,0.00047189833,0.0003229224,0.00004564213,0.0010605839],"genre_scores_gemma":[0.000085911306,0.9959971,0.00022277315,0.000733168,0.0010089006,0.0001826795,0.0013308096,0.000072603616,0.00036607403],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984357,0.000101054284,0.00036630247,0.0006754197,0.00017538643,0.00024617874],"domain_scores_gemma":[0.99891716,0.000018062789,0.00017434033,0.0006444343,0.000027605278,0.00021839165],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000802928,0.00034989647,0.0006269343,0.000053236454,0.000065688415,0.00004196229,0.0005407117,0.00039880152,0.00010746321],"category_scores_gemma":[0.00009638062,0.00029521735,0.00028909833,0.0002259414,0.0001467351,0.0000034544767,0.000268026,0.00019169347,0.0011532399],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000045611614,0.000098656856,0.0000021409746,0.0007987471,0.00010617677,0.000013534164,0.000008474409,1.0699652e-8,0.0025508697,0.000260264,0.010136133,0.98602045],"study_design_scores_gemma":[0.00007671593,0.00016037696,0.0000010844996,0.0002796648,0.0001961766,0.000023184599,0.000005662925,4.6789108e-7,0.0017388832,0.00003793776,0.9971462,0.00033364946],"about_ca_topic_score_codex":0.00002774699,"about_ca_topic_score_gemma":0.0000062065446,"teacher_disagreement_score":0.98701006,"about_ca_system_score_codex":0.000020905716,"about_ca_system_score_gemma":0.00030883323,"threshold_uncertainty_score":0.99995},"labels":[],"label_agreement":null},{"id":"W3099633864","doi":"10.3390/v12111302","title":"Analysis of Whole-Genome Sequences of Infectious laryngotracheitis Virus Isolates from Poultry Flocks in Canada: Evidence of Recombination","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; Provincial Laboratory of Public Health; Agriculture Food and Rural Development; Fonds de Recherche du Québec - Santé; Université de Montréal; Ministry of Agriculture; University of Calgary","funders":"Alberta Agriculture and Forestry","keywords":"Biology; Virology; Genome; Phylogenetic tree; Virus; Virulence; Attenuated vaccine; Recombination; Genetics; Outbreak; Viral shedding; Flock; Recombinant virus; Gene; Recombinant DNA","score_opus":0.042561597113826725,"score_gpt":0.2894445518765372,"score_spread":0.2468829547627105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3099633864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972432,0.0018289302,0.000056265588,0.00014803819,0.00003939847,0.00013990242,0.00040963275,0.000012470629,0.00012211647],"genre_scores_gemma":[0.99916553,0.0004685116,0.00009255729,0.00019322507,0.000014382811,0.000009188784,0.000043435924,0.000008541347,0.0000045956294],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894196,0.00006667247,0.0005005496,0.00019459042,0.00018651453,0.000109715176],"domain_scores_gemma":[0.9991446,0.00023547956,0.00025083817,0.00017488978,0.00012341155,0.00007079545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008197877,0.000111944035,0.00054904725,0.00024258296,0.000019507073,0.0000034436455,0.00006841638,0.00006265213,0.0002944227],"category_scores_gemma":[0.00020799445,0.00010157103,0.00010212685,0.0011229952,0.000048441605,0.00016630226,0.000022731701,0.000099508805,0.0000037550108],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006684283,0.00016344628,0.80824673,0.00006585564,0.00079657143,0.000013235307,0.00038717902,0.0007060706,0.18588318,0.00000654987,0.000008815513,0.0036555396],"study_design_scores_gemma":[0.00090396835,0.00046658827,0.83135504,0.00028290774,0.001524779,0.0000018224295,0.0003952118,0.0009008766,0.16360636,0.00004901617,0.00038035904,0.00013309279],"about_ca_topic_score_codex":0.904859,"about_ca_topic_score_gemma":0.5716249,"teacher_disagreement_score":0.3332341,"about_ca_system_score_codex":0.00018078052,"about_ca_system_score_gemma":0.00048014263,"threshold_uncertainty_score":0.43619183},"labels":[],"label_agreement":null},{"id":"W3100582614","doi":"10.3390/v12111328","title":"Rhinovirus-Induced Modulation of Epithelial Phenotype: Role in Asthma","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Rhinovirus; Phenotype; Immunology; Proinflammatory cytokine; Context (archaeology); Epithelium; Asthma; Immune system; Respiratory epithelium; Airway; Biology; Medicine; Inflammation; Gene; Genetics; Virus","score_opus":0.053812939005183816,"score_gpt":0.34090319339500147,"score_spread":0.28709025438981767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3100582614","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00351836,0.99480766,0.0000049294877,0.0000124430735,0.00014656101,0.00068319164,0.00014527944,0.000052593827,0.0006289904],"genre_scores_gemma":[0.006620312,0.99227893,0.00006085475,0.00023028506,0.00058827875,0.000044292046,0.00006531346,0.000075581454,0.000036149417],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983507,0.00013378127,0.00067624246,0.00035049833,0.00029753012,0.00019127293],"domain_scores_gemma":[0.999086,0.00007816786,0.00032121202,0.0003177745,0.000046933324,0.00014987744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090035646,0.00031928127,0.0015952663,0.0002781524,0.00002428315,0.000009417027,0.0001373376,0.00027389356,0.00018803454],"category_scores_gemma":[0.00017121897,0.0002418204,0.0003756816,0.0004316706,0.000046551497,0.00007424764,0.000060686845,0.0002987262,0.00026170106],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073306226,0.0001479958,0.00010283382,0.0055569517,0.0000634755,0.000057260553,0.000045893008,0.0000014198333,0.0008622551,0.00006341433,0.000067829955,0.99295735],"study_design_scores_gemma":[0.0004382993,0.00022108441,0.0007534981,0.005636159,0.00029707706,0.0000068304867,0.000019437965,0.000017400469,0.00016588799,0.000018631794,0.9922164,0.00020931175],"about_ca_topic_score_codex":0.00006026913,"about_ca_topic_score_gemma":0.0000103252005,"teacher_disagreement_score":0.9927481,"about_ca_system_score_codex":0.00007499562,"about_ca_system_score_gemma":0.0006346134,"threshold_uncertainty_score":0.9861149},"labels":[],"label_agreement":null},{"id":"W3101614547","doi":"10.3390/v12111314","title":"Detection of SARS-CoV-2 from Saliva as Compared to Nasopharyngeal Swabs in Outpatients","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brampton Civic Hospital; Toronto East General Hospital; University of Toronto; Sunnybrook Health Science Centre; North York General Hospital; Health Sciences Centre; Mount Sinai Hospital","funders":"University of Toronto","keywords":"Saliva; Coronavirus disease 2019 (COVID-19); Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Internal medicine; Infectious disease (medical specialty)","score_opus":0.12244625150245812,"score_gpt":0.34776060247224844,"score_spread":0.2253143509697903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3101614547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99814975,0.00010410096,0.00014661156,0.00012279124,0.00023678558,0.0003079002,0.000020600764,0.0001411231,0.0007703524],"genre_scores_gemma":[0.9834477,0.0000013606357,0.00038303022,0.015971052,0.00015208583,0.000013338479,0.000004229781,0.00002468852,0.000002560975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891216,0.00004487709,0.00036075804,0.0002734537,0.00024225435,0.00016648037],"domain_scores_gemma":[0.9995079,0.00009640447,0.00010023355,0.00016416438,0.000067424524,0.00006387671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057516085,0.00013661716,0.00032673325,0.0001527064,0.000030841526,0.000012179405,0.000080207596,0.00006862464,0.000026497155],"category_scores_gemma":[0.0006190667,0.00013640434,0.00005982195,0.00046778712,0.00002641211,0.0000886969,0.000051299186,0.00015760535,0.00031295838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006655241,0.00008679557,0.03926597,0.000025907904,0.000026059357,0.00002285029,0.0008555415,0.0000035338073,0.95583445,0.0000026013902,0.00014745753,0.0030632948],"study_design_scores_gemma":[0.0016076174,0.00046627937,0.024125261,0.00010511815,0.000028400613,0.000004531806,0.00014240966,0.00047261894,0.9681344,0.000033715463,0.004767379,0.00011228867],"about_ca_topic_score_codex":0.0048871227,"about_ca_topic_score_gemma":0.0004529954,"teacher_disagreement_score":0.01584826,"about_ca_system_score_codex":0.000055199675,"about_ca_system_score_gemma":0.00003781736,"threshold_uncertainty_score":0.73879004},"labels":[],"label_agreement":null},{"id":"W3103906346","doi":"10.3390/v12111281","title":"HIV-1 Gag Forms Ribonucleoprotein Complexes with Unspliced Viral RNA at Transcription Sites","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Penn State College of Medicine; National Cancer Institute; National Institutes of Health; University of Toronto; Pennsylvania State University; University of Pennsylvania","keywords":"Group-specific antigen; Ribonucleoprotein; Rous sarcoma virus; Murine leukemia virus; RNA; Biology; Virology; Nucleolus; Virus; Molecular biology; Nuclear localization sequence; Capsid; Transcription (linguistics); Gammaretrovirus; Immunoprecipitation; Cell nucleus; Cell biology; Nucleus; Gene; Genetics","score_opus":0.03859782203165187,"score_gpt":0.2604101230785191,"score_spread":0.2218123010468672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3103906346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951348,0.0012087488,0.00014878661,0.0010781102,0.000024778717,0.00039388033,0.00045251194,0.00015125814,0.0014071411],"genre_scores_gemma":[0.99748975,0.000058613336,0.00012599066,0.00077794364,0.000026189917,0.000056054734,0.00051580096,0.000019562489,0.0009300675],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909,0.00007562927,0.0001476552,0.00027149994,0.00005358075,0.00036161995],"domain_scores_gemma":[0.99966913,0.000040751293,0.00004343304,0.00015562722,0.000027788023,0.00006325267],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00004245464,0.0001706457,0.0002105797,0.00004385127,0.0002454313,0.000021490496,0.00013560212,0.00008998507,0.0017057615],"category_scores_gemma":[0.0000150172355,0.0001143535,0.00006267495,0.0001008329,0.00018698194,0.00014892615,0.000042328164,0.00015691257,0.0072670905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012502499,0.00010294244,0.0071077,0.000025810848,0.00019618777,0.000021653985,0.0005636358,0.0000036245056,0.98391193,0.0003957373,0.005185005,0.0012355327],"study_design_scores_gemma":[0.0029435484,0.0012277641,0.008842723,0.000020271653,0.000043848257,0.00001829835,0.00014638357,0.0000048698876,0.8697451,0.000044563276,0.116769835,0.00019282651],"about_ca_topic_score_codex":0.0001485177,"about_ca_topic_score_gemma":0.00018749548,"teacher_disagreement_score":0.114166856,"about_ca_system_score_codex":0.000041477513,"about_ca_system_score_gemma":0.000027302574,"threshold_uncertainty_score":0.99920684},"labels":[],"label_agreement":null},{"id":"W3105899368","doi":"10.3390/v12111296","title":"Flow Virometry Quantification of Host Proteins on the Surface of HIV-1 Pseudovirus Particles","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Toronto","funders":"National Center for Advancing Translational Sciences; National Institutes of Health; University of Toronto; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; University of Ottawa","keywords":"Flow cytometry; Antigen; Glycoprotein; Virus; Biology; Cell biology; Virology; CD81; Tetraspanin; Viral envelope; Cell; Chemistry; Molecular biology; Immunology; Biochemistry","score_opus":0.0694765360007246,"score_gpt":0.2892170314951439,"score_spread":0.21974049549441926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3105899368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964704,0.00086686166,0.00013749856,0.0015627813,0.000031144496,0.00031029675,0.00041829434,0.000021521384,0.00018121762],"genre_scores_gemma":[0.9995474,0.00007707815,0.00011396966,0.00014162445,0.000007139672,0.000015509739,0.000027030175,0.000007190555,0.000063059655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993019,0.0001796123,0.00018013665,0.00013974015,0.000051095158,0.00014748982],"domain_scores_gemma":[0.99938494,0.00024791114,0.000084111154,0.00022420083,0.000038864524,0.000019983652],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012281885,0.00007862289,0.0001480318,0.000026843436,0.00006722904,0.000004914351,0.00015749014,0.00005485267,0.00052044995],"category_scores_gemma":[0.00021036074,0.000048197868,0.000049214,0.00017890756,0.00017322409,0.00003575533,0.000036128353,0.00009995274,0.0019877434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028039582,0.00023308686,0.008657084,0.000019739919,0.0001197711,0.0000012283391,0.0003058663,0.0000417543,0.98626083,0.0011719618,0.0018361314,0.0010721752],"study_design_scores_gemma":[0.00039225304,0.00040432074,0.0139977755,0.00001546915,0.000014107197,6.792163e-7,0.00015804455,0.000029545687,0.97939074,0.000015454261,0.005536994,0.000044604414],"about_ca_topic_score_codex":0.000096352844,"about_ca_topic_score_gemma":0.0000074272584,"teacher_disagreement_score":0.006870053,"about_ca_system_score_codex":0.000007758768,"about_ca_system_score_gemma":0.000034965706,"threshold_uncertainty_score":0.9987893},"labels":[],"label_agreement":null},{"id":"W3109528461","doi":"10.3390/v12121375","title":"The Potentials and Pitfalls of a Human Cervical Organoid Model Including Langerhans Cells","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University; Thunder Bay Regional Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Organoid; Langerin; Langerhans cell; Epithelium; Cell biology; Biology; Petri dish; Immunology; Immune system; Pathology; Medicine; Dendritic cell; Microbiology","score_opus":0.04977152760371741,"score_gpt":0.28155726741147935,"score_spread":0.23178573980776193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3109528461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9859171,0.012647436,0.00024236094,0.0006501737,0.00010875786,0.00012974588,0.00003281387,0.00004772814,0.00022389939],"genre_scores_gemma":[0.99738747,0.000972406,0.000037909325,0.001148713,0.000018739027,0.000005372069,0.0000048214097,0.0000161289,0.00040846353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992107,0.0001699441,0.00024452322,0.0001478759,0.000029617406,0.00019733256],"domain_scores_gemma":[0.9994992,0.00019904223,0.00009425154,0.00016222597,0.00003074986,0.000014530968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015843491,0.0001161496,0.0002117024,0.000029661102,0.00034281894,0.000019844476,0.00021460961,0.00011279602,0.000150474],"category_scores_gemma":[0.00005369162,0.00007915546,0.000054484346,0.00007796433,0.00025482808,0.000067087254,0.0001383807,0.00014549079,0.00007230842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028914536,0.000030232479,0.00013938958,0.000014209667,0.00010880653,8.7712385e-7,0.0011868716,0.000007038408,0.99517554,0.0009507475,0.0011029105,0.0009942342],"study_design_scores_gemma":[0.0005664675,0.00017311632,0.00042377596,0.000015093849,0.000026992997,0.000004438669,0.00028211117,0.000022870267,0.98157406,0.00015424746,0.016654024,0.00010279018],"about_ca_topic_score_codex":0.000066854285,"about_ca_topic_score_gemma":0.000006355546,"teacher_disagreement_score":0.0155511135,"about_ca_system_score_codex":0.00000599223,"about_ca_system_score_gemma":0.000030814903,"threshold_uncertainty_score":0.32278663},"labels":[],"label_agreement":null},{"id":"W3109631032","doi":"10.3390/v12121390","title":"Early Humoral Response Correlates with Disease Severity and Outcomes in COVID-19 Patients","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Health Canada","funders":"Ministry of Education – Kingdom of Saudi Arabi","keywords":"Medicine; Coronavirus disease 2019 (COVID-19); Antibody; Disease; Immunology; Severity of illness; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus; Neutralizing antibody; Internal medicine; Infectious disease (medical specialty)","score_opus":0.057432153106029664,"score_gpt":0.3545044122079332,"score_spread":0.29707225910190355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3109631032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973009,0.00019734216,0.000009542631,0.0018983709,0.000024018003,0.0003999472,0.00004416714,0.00007557775,0.000050129955],"genre_scores_gemma":[0.8404892,0.0000029363582,0.000028597793,0.15940969,0.000018262346,0.00002326089,0.000001913969,0.000017008402,0.0000091165875],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988226,0.00012507515,0.00016491865,0.00030158076,0.00034509553,0.00024067536],"domain_scores_gemma":[0.99914986,0.00031904425,0.000035601817,0.00018389957,0.000044086595,0.00026750544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015271043,0.00014438007,0.00025771768,0.00011506697,0.0000617384,0.000043895692,0.00008703321,0.0000485421,0.000018743543],"category_scores_gemma":[0.0018106246,0.00010552361,0.000034212117,0.0002675048,0.00015249834,0.00016712956,0.00008669383,0.00020533927,0.000055961103],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017618543,0.00018673614,0.9793002,0.00009101261,0.00002582698,0.0003883541,0.00093701674,4.7572362e-7,0.0008881245,0.000010441401,0.00026035466,0.00029289094],"study_design_scores_gemma":[0.0038842347,0.00062247785,0.9812883,0.000043828517,0.000028373648,0.0000018737744,0.00011034098,0.00006312856,0.0008278277,0.000044628756,0.012950323,0.00013462918],"about_ca_topic_score_codex":0.00038610987,"about_ca_topic_score_gemma":0.000039832426,"teacher_disagreement_score":0.15751132,"about_ca_system_score_codex":0.00007390435,"about_ca_system_score_gemma":0.00038482778,"threshold_uncertainty_score":0.4303128},"labels":[],"label_agreement":null},{"id":"W3110722884","doi":"10.3390/v12121449","title":"Autochthonous Transmission of West Nile Virus by a New Vector in Iran, Vector-Host Interaction Modeling and Virulence Gene Determinants","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Culex pipiens; Biology; Vector (molecular biology); Host (biology); Virulence; Culex; Phylogenetic tree; Virology; Virus; Subclade; West Nile virus; Gene; Genetics; Clade; Ecology","score_opus":0.04097754362922529,"score_gpt":0.30037292049738457,"score_spread":0.2593953768681593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110722884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99092245,0.004743261,0.003399638,0.00037275968,0.00007247885,0.00035301733,0.00005983178,0.000047521713,0.000029039888],"genre_scores_gemma":[0.9978866,0.0006366863,0.00024759976,0.0010332799,0.00012802766,0.000016402217,0.000007835176,0.0000269449,0.000016643651],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99889374,0.000035713885,0.00036139478,0.00032894732,0.00018047447,0.00019970695],"domain_scores_gemma":[0.99941194,0.000044209035,0.000086863794,0.00015148649,0.000026728525,0.00027875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005123244,0.00017017568,0.00035719335,0.000062469204,0.000035270994,0.000020368792,0.0000810587,0.00007778179,0.0001610644],"category_scores_gemma":[0.00007203513,0.00015151205,0.000071266055,0.00014446281,0.000025124642,0.00018099308,0.000025248713,0.00013971038,0.000014077303],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018231677,0.00018809357,0.008000012,0.0001884894,0.000025013342,0.00004509432,0.0008404141,0.0001634115,0.95016485,0.0000044392814,0.0002435885,0.038313426],"study_design_scores_gemma":[0.0077023488,0.0018133968,0.056480017,0.0012133135,0.00040279346,0.00004130382,0.00043217844,0.4648876,0.4612455,0.00002602773,0.005149712,0.0006058365],"about_ca_topic_score_codex":0.0019135146,"about_ca_topic_score_gemma":0.0000625419,"teacher_disagreement_score":0.48891935,"about_ca_system_score_codex":0.000028783346,"about_ca_system_score_gemma":0.000084525185,"threshold_uncertainty_score":0.6178482},"labels":[],"label_agreement":null},{"id":"W3111243114","doi":"10.3390/v12121454","title":"Exposure Risk of Chronic Wasting Disease in Humans","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; University of Alberta","funders":"Alberta Prion Research Institute","keywords":"Chronic wasting disease; Bovine spongiform encephalopathy; Disease; Transmission (telecommunications); Virology; Biology; Transmissible spongiform encephalopathy; Population; Strain (injury); Medicine; Prion protein; Pathology; Environmental health; Scrapie","score_opus":0.03563598156069464,"score_gpt":0.3221297936939559,"score_spread":0.28649381213326125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111243114","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00080088474,0.99833095,0.00003656124,0.0000030794727,0.0000667948,0.00033892127,0.0003845305,0.000009658445,0.000028619359],"genre_scores_gemma":[0.0015137664,0.9977614,0.000045414687,0.000029341227,0.00039632147,0.00006496219,0.0001350201,0.000041860167,0.000011882308],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987568,0.00016877367,0.00040381224,0.0003852129,0.00010037719,0.0001849908],"domain_scores_gemma":[0.9991644,0.00002637668,0.00030980553,0.00035875264,0.000017669596,0.00012297201],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010689803,0.00024766003,0.0005827819,0.00006029363,0.000036337053,0.000013966537,0.00028277727,0.00015541738,0.00005202591],"category_scores_gemma":[0.0002856856,0.00021789839,0.00036095027,0.00012924963,0.00004075486,0.0000025028855,0.00019775212,0.00016405772,0.000014856444],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017386465,0.000046170204,0.0016701604,0.013401245,0.000110665394,0.000019118905,0.0000062781883,0.000020390027,0.0003270611,0.000015185772,0.00014764351,0.9842187],"study_design_scores_gemma":[0.00014688731,0.00009151129,0.00007318316,0.006172755,0.00028733368,4.910604e-7,0.0000027313124,0.000004310784,0.00016945571,0.000009774867,0.9928086,0.0002329698],"about_ca_topic_score_codex":0.00001347803,"about_ca_topic_score_gemma":0.000013904949,"teacher_disagreement_score":0.99266094,"about_ca_system_score_codex":0.000026573845,"about_ca_system_score_gemma":0.00040413276,"threshold_uncertainty_score":0.8885639},"labels":[],"label_agreement":null},{"id":"W3111817934","doi":"10.3390/v12121402","title":"Increased HIV Subtype Diversity Reflecting Demographic Changes in the HIV Epidemic in New South Wales, Australia","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of New South Wales; NSW Ministry of Health; Australian Government; National Health and Medical Research Council; McGill University","keywords":"Transmission (telecommunications); Demography; Demographics; Human immunodeficiency virus (HIV); Phylogenetic tree; Diversity (politics); Population; Biology; Genetic diversity; Virology; Medicine; Genetics; Gene","score_opus":0.16111148250073046,"score_gpt":0.334959297687949,"score_spread":0.17384781518721856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111817934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951679,0.0012183846,0.0000070417896,0.0030343407,0.000038944076,0.00024327698,0.00010358889,0.000038543858,0.00014794766],"genre_scores_gemma":[0.9983588,0.000110982684,0.00003625211,0.0011117919,0.00003641386,0.000009310227,0.000092765884,0.00000675018,0.00023695508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986619,0.0004880824,0.00014598649,0.0002558592,0.000047372945,0.00040084848],"domain_scores_gemma":[0.999464,0.00026379264,0.00005288553,0.00015861544,0.00001143524,0.00004930877],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030772184,0.00013398721,0.00020292308,0.00014459915,0.00016956116,0.000012008998,0.00029552547,0.00012521162,0.00037728166],"category_scores_gemma":[0.00027150597,0.000095435214,0.00004738574,0.0004390981,0.000096152544,0.00005685822,0.0001676829,0.00039754924,0.001622329],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027451845,0.000064019994,0.96882534,0.000011547467,0.0000576797,0.00007119458,0.0041251215,0.0000013747998,0.016925015,0.000056817342,0.008994095,0.00059328007],"study_design_scores_gemma":[0.004310251,0.00040233342,0.93144643,0.00007585983,0.00006172269,0.000017975797,0.002760726,0.0000034534019,0.015357707,0.00017054431,0.04508117,0.00031185304],"about_ca_topic_score_codex":0.007214765,"about_ca_topic_score_gemma":0.009054231,"teacher_disagreement_score":0.03737893,"about_ca_system_score_codex":0.000037090053,"about_ca_system_score_gemma":0.00007099436,"threshold_uncertainty_score":0.99939626},"labels":[],"label_agreement":null},{"id":"W3111939301","doi":"10.3390/v12121431","title":"Bovine Adenovirus-3 Tropism for Bovine Leukocyte Sub-Populations","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Tropism; Virology; Biology; Virus","score_opus":0.07815307444127464,"score_gpt":0.3394451268995159,"score_spread":0.2612920524582413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111939301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907165,0.0025962992,0.0036872644,0.001848155,0.00012389716,0.0005240591,0.00020977712,0.00006460504,0.00022941666],"genre_scores_gemma":[0.990705,0.00033183015,0.0009760397,0.0060291016,0.0011316742,0.00012221404,0.0002914991,0.000079570724,0.00033307495],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986548,0.00006702505,0.00025433998,0.00045352234,0.00019249058,0.00037785922],"domain_scores_gemma":[0.999217,0.000022714421,0.00007026965,0.00037820986,0.00010762444,0.00020423751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012075929,0.00020254357,0.00019194273,0.000053240907,0.0001559647,0.000042922704,0.0003150615,0.00013158172,0.00011111713],"category_scores_gemma":[0.00022668795,0.00019882154,0.00014001726,0.00017213504,0.00008435628,0.000009106156,0.00011688186,0.0001085402,0.0001094957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039841253,0.000051757543,0.00073378783,0.000025375857,0.00006167726,0.0000026551515,0.000029508552,0.00007757321,0.97201544,0.00015119392,0.019260744,0.0036061828],"study_design_scores_gemma":[0.0009945756,0.0042062346,0.00037354822,0.000004823353,0.0000194925,0.0000021101653,0.000015486086,0.00018339162,0.7974519,0.00008366395,0.19644366,0.00022110209],"about_ca_topic_score_codex":0.000023146247,"about_ca_topic_score_gemma":0.00019899558,"teacher_disagreement_score":0.17718293,"about_ca_system_score_codex":0.000019746032,"about_ca_system_score_gemma":0.00014153983,"threshold_uncertainty_score":0.8107707},"labels":[],"label_agreement":null},{"id":"W3112012159","doi":"10.3390/v13010130","title":"Prevalence of Co-Infections with Respiratory Viruses in Individuals Investigated for SARS-CoV-2 in Ontario, Canada","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; University of Toronto; Public Health Ontario","funders":"","keywords":"Respiratory system; Medicine; Respiratory disease; Virus; Respiratory infection; Coronavirus; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Immunology; Biology; Disease; Coronavirus disease 2019 (COVID-19); Internal medicine; Infectious disease (medical specialty); Lung","score_opus":0.13806502047948263,"score_gpt":0.384937105257563,"score_spread":0.24687208477808034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112012159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975608,0.00030401148,0.00001733051,0.000053390915,0.00005938735,0.000741048,0.00009908528,0.000027238917,0.0011376939],"genre_scores_gemma":[0.9957405,0.000013140609,0.00028675093,0.0034297442,0.000027111226,0.00028080115,0.0000075720714,0.000034481705,0.00017991963],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981631,0.00018431348,0.00052808854,0.000366334,0.0004133844,0.00034476817],"domain_scores_gemma":[0.9988042,0.00030173856,0.00011362648,0.0004093677,0.00027954593,0.00009153168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039942918,0.00017655062,0.00038359003,0.00046653498,0.00006667584,0.000022489403,0.00010775419,0.000108180524,0.00016798229],"category_scores_gemma":[0.00089469866,0.00016167824,0.0000421084,0.0009594593,0.00020037979,0.0002219718,0.000044143395,0.00040878306,0.0000058850896],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008037771,0.0002551561,0.8138918,0.00023941662,0.00004579215,0.000063695225,0.000106221225,0.000050574552,0.1826074,0.000079488986,0.0024923824,0.00008768398],"study_design_scores_gemma":[0.0013322686,0.00047220755,0.45022807,0.00029451543,0.000024918096,0.000012186846,0.000049778675,0.000005352274,0.5085027,0.00003206283,0.03892993,0.00011598323],"about_ca_topic_score_codex":0.8683504,"about_ca_topic_score_gemma":0.99420464,"teacher_disagreement_score":0.36366376,"about_ca_system_score_codex":0.00074429024,"about_ca_system_score_gemma":0.00814957,"threshold_uncertainty_score":0.9974733},"labels":[],"label_agreement":null},{"id":"W3112065475","doi":"10.3390/v12121411","title":"Creutzfeldt–Jakob Disease with a Five-Year Clinical Course, Multicentric Cerebellar Prion Plaques and Prior History of Biopsy-Proven Primary Angiitis of the Central Nervous System: A Case for Iatrogenic Exposure?","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Ottawa; University of Calgary; University of Alberta","funders":"","keywords":"Medicine; Brain biopsy; Autopsy; Pathology; Biopsy; Stereotactic biopsy; Central nervous system; Neurosurgery; Cerebellum; Radiology; Internal medicine","score_opus":0.02110755658667125,"score_gpt":0.2545195315053013,"score_spread":0.23341197491863008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112065475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95281273,0.04574657,0.00017343563,0.000077259894,0.000113891176,0.0006487416,0.000400435,0.000014836645,0.000012096891],"genre_scores_gemma":[0.9975877,0.0010467902,0.0008309662,0.00025251415,0.00017832693,0.000033172702,0.000021696776,0.000026903997,0.000021956961],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988381,0.00012410268,0.00035515951,0.00033775516,0.00013701429,0.00020785784],"domain_scores_gemma":[0.9990293,0.000048971542,0.0002976433,0.00030399152,0.000091915914,0.00022819867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118873366,0.00015681877,0.00026519687,0.000018412471,0.000056511584,0.000010356664,0.00017232087,0.00009867582,0.000005651375],"category_scores_gemma":[0.00016669995,0.00011634318,0.000237547,0.00006345743,0.00016926586,0.000009268109,0.00013734681,0.00006240737,3.792385e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01845107,0.0011672787,0.6130242,0.0083019575,0.0019522714,0.0005176009,0.0012054819,0.00018108587,0.29510754,0.0004156073,0.0051844344,0.0544915],"study_design_scores_gemma":[0.031457037,0.010610354,0.70336866,0.002043173,0.00796226,0.0008606602,0.003717726,0.002732586,0.1251961,0.00004163039,0.10891985,0.0030899735],"about_ca_topic_score_codex":0.00009168299,"about_ca_topic_score_gemma":0.000018225908,"teacher_disagreement_score":0.16991144,"about_ca_system_score_codex":0.00003964203,"about_ca_system_score_gemma":0.00043919496,"threshold_uncertainty_score":0.47443372},"labels":[],"label_agreement":null},{"id":"W3113296383","doi":"10.3390/v12121456","title":"Application of a Sanger-Based External Quality Assurance Strategy for the Transition of HIV-1 Drug Resistance Assays to Next Generation Sequencing","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases; National Institute of Allergy and Infectious Diseases","keywords":"Quality assurance; Sanger sequencing; External quality assessment; HIV drug resistance; Medicine; Human immunodeficiency virus (HIV); Medical physics; Data mining; DNA sequencing; Computational biology; Computer science; Virology; Viral load; Biology; Pathology; Genetics; Antiretroviral therapy","score_opus":0.2091575424745035,"score_gpt":0.38911670450741853,"score_spread":0.17995916203291504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3113296383","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017748502,0.8542634,0.14118941,0.0008630301,0.00005121946,0.0029323052,0.0004341245,0.00003140291,0.000057597103],"genre_scores_gemma":[0.009386651,0.96359247,0.022547767,0.0003977705,0.00048172288,0.0021059508,0.0007298032,0.0000821458,0.0006757452],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982978,0.00014849786,0.00077778136,0.0003248964,0.00031935328,0.00013168233],"domain_scores_gemma":[0.99852663,0.0004389495,0.00050570164,0.00031317896,0.00015300383,0.00006252683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004315375,0.00024502934,0.0009753245,0.00009129501,0.00006398508,0.000016763377,0.00012150249,0.00009275838,0.000013707484],"category_scores_gemma":[0.00008238201,0.000167152,0.000278408,0.00029665252,0.00003597459,0.00006436422,0.0000073183455,0.000103263155,0.000012199935],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040048925,0.00024077937,0.0000367288,0.036834445,0.0005781369,0.000007059491,0.0010887757,0.0002447924,0.012733326,0.00074584264,0.004849054,0.9422406],"study_design_scores_gemma":[0.0010100561,0.000074802505,0.00004386664,0.009969573,0.001849825,0.0000028502604,0.000109081884,0.0009065064,0.010690838,0.000034840803,0.97498286,0.00032488993],"about_ca_topic_score_codex":0.000047544294,"about_ca_topic_score_gemma":0.00018007802,"teacher_disagreement_score":0.97013384,"about_ca_system_score_codex":0.00020928279,"about_ca_system_score_gemma":0.00066911854,"threshold_uncertainty_score":0.6816261},"labels":[],"label_agreement":null},{"id":"W3114136456","doi":"10.3390/v13010024","title":"Editing of the TRIM5 Gene Decreases the Permissiveness of Human T Lymphocytic Cells to HIV-1","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Fondation de l’UQTR","keywords":"Biology; Gene; Gene knockdown; clone (Java method); Allele; Effector; CRISPR; Molecular biology; HEK 293 cells; Virology; Genetics; Cell biology","score_opus":0.04112523253066607,"score_gpt":0.28870772383424903,"score_spread":0.24758249130358295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3114136456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99746996,0.0012067843,0.0000087228045,0.00041562188,0.000086048836,0.00023193528,0.00033051864,0.00001168081,0.0002387084],"genre_scores_gemma":[0.99928236,0.000027350541,0.0000131147135,0.00044271848,0.000043268865,0.00001672471,0.000017227323,0.0000075930266,0.00014962078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993036,0.00017932637,0.00017109937,0.00012575006,0.000046677225,0.000173557],"domain_scores_gemma":[0.9994349,0.00019394736,0.000076475066,0.00021567616,0.000046635356,0.00003235781],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007476788,0.00008376023,0.00016720896,0.000023108854,0.00015804009,0.0000049476303,0.000303856,0.00004239041,0.0003013759],"category_scores_gemma":[0.00016293958,0.00004328625,0.00008215492,0.00013290173,0.00018483163,0.000020822597,0.00013368746,0.000064047716,0.00020711323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008577924,0.000060562466,0.0032922754,0.000020740004,0.00010834012,0.0000031295392,0.0005862192,0.000023077397,0.99051785,0.00007691414,0.00457529,0.00064980274],"study_design_scores_gemma":[0.0006676586,0.00017504711,0.0033121607,0.000026539346,0.00003599409,0.0000037278528,0.00026252193,7.3845985e-7,0.9833788,0.0000105539475,0.012085498,0.00004071281],"about_ca_topic_score_codex":0.00034313023,"about_ca_topic_score_gemma":0.000014614721,"teacher_disagreement_score":0.007510208,"about_ca_system_score_codex":0.000028104816,"about_ca_system_score_gemma":0.00015120827,"threshold_uncertainty_score":0.32998547},"labels":[],"label_agreement":null},{"id":"W3114788873","doi":"10.3390/v13010054","title":"Lead SARS-CoV-2 Candidate Vaccines: Expectations from Phase III Trials and Recommendations Post-Vaccine Approval","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Clinical trial; Medicine; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); European union; Vaccine efficacy; Tuberculosis vaccines; Vaccination; Tuberculosis; Internal medicine; Disease; Infectious disease (medical specialty); Business","score_opus":0.21360639324526484,"score_gpt":0.4806499256961129,"score_spread":0.2670435324508481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3114788873","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027989126,0.98951364,0.00018775211,0.0008533702,0.00041982252,0.002890398,0.002807791,0.00023878776,0.00028953218],"genre_scores_gemma":[0.000098994264,0.9666334,0.00072462275,0.02858663,0.0016683253,0.0008686156,0.0012027461,0.00018615593,0.000030524472],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956088,0.0006481598,0.0017574512,0.0010318222,0.000452872,0.000500903],"domain_scores_gemma":[0.99637085,0.001788102,0.00069307146,0.00078687776,0.00024378895,0.00011728682],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005703656,0.00074167794,0.004109234,0.0007055164,0.00024908266,0.0001891444,0.00037798722,0.00039621803,0.0001369522],"category_scores_gemma":[0.0026011749,0.00056263694,0.00065474043,0.0009435856,0.00006254376,0.00025055135,0.00021550407,0.0008212563,0.00047522155],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088244316,0.00044563442,0.00004220995,0.0029531799,0.0016354921,0.00018299902,0.000827663,3.236545e-9,0.0066508814,0.00004651587,0.016799616,0.9695334],"study_design_scores_gemma":[0.0072009997,0.00044303146,0.0000019424142,0.0030355707,0.0023434167,0.000064862776,0.00043241278,0.000014101133,0.0048572384,0.0000382799,0.981078,0.00049009745],"about_ca_topic_score_codex":0.0013355515,"about_ca_topic_score_gemma":0.00030543454,"teacher_disagreement_score":0.96904325,"about_ca_system_score_codex":0.00018049184,"about_ca_system_score_gemma":0.0013256762,"threshold_uncertainty_score":0.9996825},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":[],"domain":null,"study_design":"design_other","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"split"},{"id":"W3116043610","doi":"10.3390/v12121473","title":"The RNA Architecture of the SARS-CoV-2 3′-Untranslated Region","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Massachusetts Institute of Technology; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; National Institutes of Health; National Institute of General Medical Sciences; Chinese Academy of Sciences; Institute of Genetics; University of Texas Medical Branch","keywords":"Three prime untranslated region; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Untranslated region; Coronavirus disease 2019 (COVID-19); Biology; RNA; Computational biology; Genetics; Medicine; Gene; Disease; Internal medicine; Infectious disease (medical specialty)","score_opus":0.03450150265868022,"score_gpt":0.25674366773847085,"score_spread":0.22224216507979064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116043610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899807,0.0020285023,0.0025536015,0.004276409,0.00013108998,0.00023649959,0.000012340519,0.000014015741,0.0007668535],"genre_scores_gemma":[0.9968897,0.00018443752,0.000103712904,0.0026515045,0.00011165728,0.0000073380897,0.0000014192977,0.000012515403,0.00003771341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994702,0.00008789121,0.0001124374,0.00013460979,0.000085655935,0.00010924413],"domain_scores_gemma":[0.99961454,0.00001767939,0.00006426983,0.00026496543,0.0000206634,0.000017901664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005899676,0.00008135882,0.00007053659,0.0000047222134,0.00009780342,0.000012542932,0.00029925528,0.00007421958,0.000002596316],"category_scores_gemma":[0.000083829604,0.000042360025,0.000082769846,0.00007026888,0.0000782632,0.0000011137781,0.000051783278,0.000059633792,0.000004873198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009084122,0.000005189459,0.00004600146,0.0000065888867,0.000025448258,7.190538e-7,0.00006786173,0.000007724549,0.99066263,0.00017435919,0.0014229723,0.007489663],"study_design_scores_gemma":[0.000087353226,0.00006474309,0.00005560363,0.000007978401,0.000008990493,0.0000031222692,0.0000125564075,0.00000417602,0.8427523,0.00031418286,0.15663889,0.00005015148],"about_ca_topic_score_codex":0.000016315427,"about_ca_topic_score_gemma":0.000016872662,"teacher_disagreement_score":0.15521592,"about_ca_system_score_codex":0.0000013262708,"about_ca_system_score_gemma":0.000028287159,"threshold_uncertainty_score":0.17273916},"labels":[],"label_agreement":null},{"id":"W3117560261","doi":"10.3390/v13010031","title":"Palmitoylation of the Bovine Foamy Virus Envelope Glycoprotein Is Required for Viral Replication","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China; McGill University","keywords":"Palmitoylation; Viral replication; Glycoprotein; Viral envelope; Biology; Virus; Virology; Cell biology; Context (archaeology); Lipid bilayer fusion; Molecular biology; Biochemistry; Cysteine; Enzyme","score_opus":0.05063246027175543,"score_gpt":0.3249916454028901,"score_spread":0.27435918513113466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3117560261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99451864,0.00070926925,0.0015002928,0.0021066952,0.000051170056,0.0007931035,0.00016705772,0.000016768106,0.00013700308],"genre_scores_gemma":[0.9954183,0.000120046396,0.0005062122,0.0032804082,0.00029042177,0.00012149263,0.000060580274,0.00003079139,0.00017170967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998966,0.00007439742,0.0002388867,0.00036601676,0.00018226422,0.00017246732],"domain_scores_gemma":[0.9990452,0.000016954426,0.00013549754,0.0006277683,0.00011915875,0.00005540778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019723235,0.00011582676,0.00012028337,0.000021133343,0.000090332636,0.00001503641,0.00032959148,0.00010365131,0.000043980453],"category_scores_gemma":[0.0003013058,0.000091775015,0.00010522228,0.00014709594,0.00008206759,0.000007182088,0.00010932551,0.0000580271,0.000014013333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024652404,0.0000274222,0.00056304794,0.000026753127,0.00003704802,1.0501658e-7,0.00007465503,0.0000150400865,0.98540646,0.00004453188,0.0035342562,0.0078054494],"study_design_scores_gemma":[0.00054696994,0.0015373995,0.0005744329,0.000007370968,0.000010284528,4.90672e-7,0.000012420576,0.00013561978,0.93974036,0.00014279809,0.057190344,0.00010148807],"about_ca_topic_score_codex":0.000036829853,"about_ca_topic_score_gemma":0.00004048032,"teacher_disagreement_score":0.053656086,"about_ca_system_score_codex":0.000012600895,"about_ca_system_score_gemma":0.00011032754,"threshold_uncertainty_score":0.37424764},"labels":[],"label_agreement":null},{"id":"W3118021759","doi":"10.3390/v13010044","title":"Interferon-α2b Treatment for COVID-19 Is Associated with Improvements in Lung Abnormalities","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"","keywords":"Medicine; Lung; Immunology; Internal medicine; Interferon; C-reactive protein; CD8; Tumor necrosis factor alpha; Gastroenterology; Cohort; Immune system; Inflammation","score_opus":0.17408508030312295,"score_gpt":0.4622663001639164,"score_spread":0.2881812198607935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118021759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9412704,0.0005337883,0.0012380646,0.052221037,0.000086702465,0.0033528304,0.00066679716,0.0002465996,0.0003837588],"genre_scores_gemma":[0.9353576,0.00030914374,0.00009123452,0.06296804,0.00009417189,0.00039248005,0.000028414797,0.000026512369,0.0007324296],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985367,0.00005538181,0.0003418688,0.00036509376,0.0003111373,0.00038979037],"domain_scores_gemma":[0.99627376,0.0029993728,0.00008621398,0.0001835024,0.0000920901,0.00036505057],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00025256793,0.00019003486,0.0004742063,0.00008604182,0.00008227782,0.000024139297,0.00010385524,0.000062695355,0.00019104232],"category_scores_gemma":[0.013857489,0.0001305783,0.000098766825,0.00022370517,0.00012516107,0.0000916007,0.0001020221,0.00012894247,0.000017014148],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018182416,0.0023699559,0.89748424,0.003293775,0.0035004013,0.00044572403,0.01934899,0.000121466226,0.005454925,0.00028941123,0.039848186,0.009660528],"study_design_scores_gemma":[0.092949525,0.06328388,0.08834653,0.0015716059,0.0013764926,0.0000024557332,0.005838767,0.010869766,0.040447958,0.0006848119,0.692943,0.0016852418],"about_ca_topic_score_codex":0.0011857041,"about_ca_topic_score_gemma":0.0003586677,"teacher_disagreement_score":0.8091377,"about_ca_system_score_codex":0.00079445733,"about_ca_system_score_gemma":0.0005462733,"threshold_uncertainty_score":0.9944492},"labels":[],"label_agreement":null},{"id":"W3118061239","doi":"10.3390/v13010029","title":"Endothelium Infection and Dysregulation by SARS-CoV-2: Evidence and Caveats in COVID-19","year":2020,"lang":"en","type":"review","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":182,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women and Children’s Health Research Institute; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Endothelial dysfunction; Endothelium; Coronavirus; Immunology; Angiotensin-converting enzyme 2; Pandemic; Medicine; Disease; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Downregulation and upregulation; Coronavirus disease 2019 (COVID-19); Endothelial activation; Lung; Inflammation; Biology; Pathology; Infectious disease (medical specialty); Internal medicine; Gene; Genetics","score_opus":0.3051395786245621,"score_gpt":0.5410181305168874,"score_spread":0.23587855189232532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118061239","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003705055,0.99632007,0.000092472976,0.0016570186,0.00006454616,0.0013368779,0.000060306622,0.00007380111,0.000024389576],"genre_scores_gemma":[0.0009419259,0.99447584,0.00003112601,0.004148075,0.00015390984,0.00015048655,0.00001700203,0.00003582696,0.0000458279],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99776644,0.00033482545,0.00060400344,0.00065681245,0.00037465562,0.00026329662],"domain_scores_gemma":[0.990752,0.008495916,0.00020019631,0.00026173456,0.000050430077,0.0002397397],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005408907,0.00033046916,0.0014762238,0.00027774836,0.00008384397,0.0000592557,0.00007635908,0.0002472546,0.000017163295],"category_scores_gemma":[0.051491305,0.00025752833,0.000121861056,0.00046670664,0.00026939853,0.00019838123,0.00026767363,0.00052612927,0.000034527468],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009928525,0.00007120672,0.0046502766,0.05413982,0.00014024785,0.00008177994,0.000116868476,3.710797e-7,0.00028774058,0.000026606223,0.0031840205,0.9372018],"study_design_scores_gemma":[0.00051427766,0.00026535508,0.0005783473,0.013466023,0.00035014987,0.000010331151,0.0000032459627,0.00002189836,0.000045899127,0.00006411166,0.98448235,0.00019800711],"about_ca_topic_score_codex":0.0019097084,"about_ca_topic_score_gemma":0.00022399165,"teacher_disagreement_score":0.9812983,"about_ca_system_score_codex":0.00040607253,"about_ca_system_score_gemma":0.00071227225,"threshold_uncertainty_score":0.9999877},"labels":[],"label_agreement":null},{"id":"W3118351502","doi":"10.3390/v13010071","title":"Embryonic Origins of Virus-Induced Hearing Loss: Overview of Molecular Etiology","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; University of Manitoba; Research Manitoba; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Otic vesicle; Hearing loss; Biology; Inner ear; Congenital hearing loss; Sonic hedgehog; Wnt signaling pathway; Retinoic acid; Cell biology; Sensorineural hearing loss; Immunology; Genetics; Neuroscience; Signal transduction; Audiology; Medicine; In situ hybridization; Gene expression; Gene","score_opus":0.23880951458523472,"score_gpt":0.45833948212878806,"score_spread":0.21952996754355333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118351502","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0065538986,0.99128276,0.000008184293,0.000028359047,0.00018272016,0.0008523701,0.00019563384,0.00003685727,0.0008592232],"genre_scores_gemma":[0.00078833767,0.998286,0.0001628303,0.00018785492,0.00016294072,0.000073301024,0.000087673434,0.0001217897,0.00012925678],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965176,0.00040893845,0.0012372916,0.00064927543,0.0006423868,0.00054451724],"domain_scores_gemma":[0.99736667,0.000351591,0.000577545,0.0011681429,0.0003146193,0.0002214291],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054406235,0.0005254779,0.0044807424,0.0006472214,0.000046321784,0.000018527007,0.00039261192,0.00064071646,0.0011790066],"category_scores_gemma":[0.0003538085,0.000428236,0.0012438629,0.0011069573,0.00021778542,0.0000680006,0.00035417426,0.0009006607,0.00017008367],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008668751,0.0006524152,0.00011752985,0.09634647,0.002178918,0.00068370526,0.00006040493,9.328302e-7,0.017603148,0.010800497,0.0005373446,0.8709319],"study_design_scores_gemma":[0.00046895043,0.0003096921,0.000024738276,0.025702892,0.001166482,0.00013790034,0.00001058542,0.0000010096873,0.007938043,0.00001844951,0.9639236,0.0002976872],"about_ca_topic_score_codex":0.0013895525,"about_ca_topic_score_gemma":0.00007150352,"teacher_disagreement_score":0.96338624,"about_ca_system_score_codex":0.00035971616,"about_ca_system_score_gemma":0.0022628016,"threshold_uncertainty_score":0.99981695},"labels":[],"label_agreement":null},{"id":"W3118598143","doi":"10.3390/v13010097","title":"In Vitro Infection with Hepatitis B Virus Using Differentiated Human Serum Culture of Huh7.5-NTCP Cells without Requiring Dimethyl Sulfoxide","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Li Ka Shing Institute of Virology, University of Alberta; Canadian Institutes of Health Research; Alberta Innovates","keywords":"Hepatitis B virus; In vitro; Cell culture; Infectivity; Dimethyl sulfoxide; Fetal bovine serum; Virology; Bovine serum albumin; Biology; In vivo; Hepatocyte; Albumin; Immunology; Virus; Chemistry; Endocrinology; Biochemistry","score_opus":0.04258148040645811,"score_gpt":0.3211818309012711,"score_spread":0.278600350494813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118598143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980802,0.00053454237,0.00026701842,0.000030261202,0.00020311102,0.00031059037,0.000071419985,0.0000939009,0.00040893594],"genre_scores_gemma":[0.9966376,0.00079235766,0.0016304796,0.00040860477,0.000115672374,0.000019499987,0.00002440683,0.00006187103,0.00030952197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980917,0.00017801386,0.0005278559,0.00042569,0.00038857508,0.000388196],"domain_scores_gemma":[0.9989813,0.00005105029,0.00022821434,0.00036877926,0.00026813836,0.000102536644],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014981515,0.00030256188,0.0007420673,0.00023988416,0.00015393409,0.000031221996,0.00006516441,0.00015009067,0.00018304837],"category_scores_gemma":[0.00012416432,0.00025670763,0.000099130375,0.0006477971,0.00015246295,0.00030165995,0.00012204968,0.00032365625,0.000020207814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009640539,0.00016418601,0.42838696,0.00013078819,0.000118216805,0.00010333911,0.000481282,0.000018148794,0.5703539,0.0000122878955,0.00006312665,0.00007131519],"study_design_scores_gemma":[0.001217334,0.00015996897,0.24115066,0.0004883961,0.00016624319,0.000027397475,0.00004583491,0.00007380125,0.7559286,0.000030653675,0.0005036711,0.00020746679],"about_ca_topic_score_codex":0.03116855,"about_ca_topic_score_gemma":0.029788906,"teacher_disagreement_score":0.18723628,"about_ca_system_score_codex":0.00019229551,"about_ca_system_score_gemma":0.000109608976,"threshold_uncertainty_score":0.9999885},"labels":[],"label_agreement":null},{"id":"W3119453605","doi":"10.3390/v13010109","title":"Domains and Functions of Spike Protein in SARS-Cov-2 in the Context of Vaccine Design","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":334,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Context (archaeology); Viral entry; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Lipid bilayer fusion; Function (biology); Computational biology; Messenger RNA; Receptor; Coronavirus; Spike Protein; Cell biology; Virology; Coronavirus disease 2019 (COVID-19); Genetics; Virus; Viral replication; Gene; Medicine","score_opus":0.19298014146538314,"score_gpt":0.42387497677499614,"score_spread":0.230894835309613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119453605","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019606028,0.977592,0.00005102001,0.000049739552,0.00003541446,0.0023235134,0.000040348146,0.000009795123,0.00029214582],"genre_scores_gemma":[0.0044691344,0.9851142,0.00023432884,0.009027792,0.00013969326,0.0008968033,0.0000129336795,0.000079366546,0.000025705149],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977706,0.0005432734,0.0007500505,0.0003286087,0.00036006648,0.00024739353],"domain_scores_gemma":[0.99842554,0.0007138649,0.00021401054,0.00053319783,0.00009953798,0.000013840643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094867445,0.00026006033,0.001606602,0.00053999014,0.000024914809,0.000015377202,0.0002202298,0.00022110344,0.000010102973],"category_scores_gemma":[0.0005618436,0.00016344678,0.00019835347,0.0010744522,0.000107377644,0.000053328135,0.00009111397,0.0005082282,0.0000129020455],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047386313,0.0014420369,0.002919571,0.037838966,0.0004614159,0.0005431806,0.0008561775,6.595506e-8,0.039168313,0.0009833523,0.0019255448,0.91338754],"study_design_scores_gemma":[0.0012017667,0.00035456652,0.00010038951,0.013994843,0.00023698776,0.000053024763,0.00033513157,0.0000017475935,0.017410422,0.00003310725,0.96613216,0.00014586844],"about_ca_topic_score_codex":0.0009141994,"about_ca_topic_score_gemma":0.00067373697,"teacher_disagreement_score":0.9642066,"about_ca_system_score_codex":0.00007593003,"about_ca_system_score_gemma":0.00077937025,"threshold_uncertainty_score":0.6665166},"labels":[],"label_agreement":null},{"id":"W3119770690","doi":"10.3390/v13010070","title":"TRIM26 Facilitates HSV-2 Infection by Downregulating Antiviral Responses through the IRF3 Pathway","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"IRF3; Herpes simplex virus; Biology; ISG15; Interferon; Downregulation and upregulation; Virology; Viral replication; Cell culture; Intrinsic immunity; Virus; Immunology; Gene; Immunity; Immune system; Innate immune system","score_opus":0.04818238925760788,"score_gpt":0.32890605310036475,"score_spread":0.2807236638427569,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119770690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896577,0.0013380807,0.0002551085,0.00050819485,0.00023035484,0.00022239644,0.00011545131,0.0001546881,0.0075180084],"genre_scores_gemma":[0.99510056,0.0002497404,0.00026345663,0.00086790125,0.0001111989,0.000044066448,0.000040405455,0.00002146181,0.0033011842],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988464,0.00021467911,0.00024390273,0.0002693389,0.00019024572,0.00023541303],"domain_scores_gemma":[0.9991344,0.00032407878,0.00006378703,0.0003403944,0.000093652336,0.00004369448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016223357,0.00017018899,0.00022122849,0.000043117507,0.0003568884,0.0000608205,0.000034700508,0.00008722606,0.00026339953],"category_scores_gemma":[0.00039157696,0.00011066298,0.00012671393,0.00036099486,0.000107056694,0.00022224967,0.000041260235,0.00016505724,0.00022230664],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006440147,0.0018609198,0.38656935,0.0001282241,0.00097279093,0.00029031353,0.0024775567,0.000023140472,0.3162914,0.0016920913,0.017768338,0.27128184],"study_design_scores_gemma":[0.0011273565,0.00021546787,0.037923202,0.00007589711,0.0001040792,0.00007515797,0.00023428666,0.000014706907,0.35940105,0.0003105931,0.60036933,0.00014891059],"about_ca_topic_score_codex":0.0010825766,"about_ca_topic_score_gemma":0.00010319938,"teacher_disagreement_score":0.58260095,"about_ca_system_score_codex":0.000068726804,"about_ca_system_score_gemma":0.00013036604,"threshold_uncertainty_score":0.45127055},"labels":[],"label_agreement":null},{"id":"W3120452895","doi":"10.3390/v13010090","title":"The Fatty Acid Lipid Metabolism Nexus in COVID-19","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Lipid metabolism; Coronavirus disease 2019 (COVID-19); Nexus (standard); Fatty acid; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Metabolism; 2019-20 coronavirus outbreak; Fatty acid metabolism; Biochemistry; Chemistry; Biology; Virology; Medicine; Internal medicine; Outbreak; Disease; Computer science; Infectious disease (medical specialty)","score_opus":0.06586968426688043,"score_gpt":0.36558621925953483,"score_spread":0.2997165349926544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120452895","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000020889394,0.99779445,0.00011398801,0.000097557124,0.0008001353,0.0003601865,0.00012117902,0.000013225954,0.00067840307],"genre_scores_gemma":[0.000013939577,0.99740666,0.00014976585,0.00093074824,0.00077970687,0.00020137563,0.00015090572,0.000051166684,0.0003157335],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99790233,0.00034419028,0.0005371787,0.0006227244,0.00016541034,0.00042817285],"domain_scores_gemma":[0.99865735,0.000120591976,0.00025748688,0.00078081945,0.0000463782,0.00013736419],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048170055,0.00043634864,0.001227237,0.000111699905,0.00022360054,0.00012049619,0.00053861487,0.00033065115,0.0000438317],"category_scores_gemma":[0.001126242,0.0002819033,0.00047886118,0.00038112106,0.00013681209,0.000003494096,0.0005257996,0.0002944275,0.000030260784],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033783293,0.00015053463,0.00002497352,0.0027114076,0.0014903811,0.00005532614,0.0000504995,0.0000034555685,0.0025241403,0.006159472,0.030708523,0.9560875],"study_design_scores_gemma":[0.0001816347,0.000024499943,0.0000036560082,0.00023988936,0.0002351917,0.00001993494,0.000046797995,1.4969311e-7,0.00064832426,0.000054332715,0.9982306,0.00031500173],"about_ca_topic_score_codex":0.00005665637,"about_ca_topic_score_gemma":0.00024347063,"teacher_disagreement_score":0.9675221,"about_ca_system_score_codex":0.000043467742,"about_ca_system_score_gemma":0.00059900526,"threshold_uncertainty_score":0.9999633},"labels":[],"label_agreement":null},{"id":"W3121797937","doi":"10.3390/v13020161","title":"Interactions of Influenza and SARS-CoV-2 with the Lung Endothelium: Similarities, Differences, and Implications for Therapy","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; California HIV/AIDS Research Program","keywords":"Pathogenesis; Immunology; Lung; Endothelium; Pandemic; Virus; Coagulopathy; Coronavirus; Immune system; Inflammation; Biology; Influenza A virus; Medicine; Virology; Coronavirus disease 2019 (COVID-19); Pathology; Disease; Infectious disease (medical specialty); Internal medicine; Genetics","score_opus":0.35167786876718365,"score_gpt":0.5424517676870309,"score_spread":0.1907738989198472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121797937","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038654864,0.9959641,0.00014455355,0.001437921,0.000023828632,0.0014641021,0.0005074194,0.000018835086,0.000052696472],"genre_scores_gemma":[0.0003043233,0.99546033,0.00014554668,0.0031309559,0.00008864695,0.0007628023,0.000011784612,0.00002888921,0.00006669658],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99886745,0.00010554328,0.00039087867,0.0003158445,0.00014228847,0.00017799165],"domain_scores_gemma":[0.9867184,0.01242413,0.00020285777,0.00040124176,0.00020335196,0.000049980084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021647589,0.00022674365,0.0011552757,0.0001034891,0.00015967376,0.000041396837,0.00012310245,0.00006847768,0.000009790194],"category_scores_gemma":[0.0027047535,0.000113587754,0.00015674923,0.00019832175,0.00045432666,0.000051450712,0.00013573199,0.00031961646,4.2841933e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001359316,0.00023522928,0.004918317,0.023749834,0.0022607988,0.0000030673152,0.000300372,5.4814805e-8,0.00016472819,0.0016885368,0.0063063777,0.9602367],"study_design_scores_gemma":[0.0004494556,0.00018031083,0.0010776258,0.004979414,0.000651895,0.0000069000225,0.0000408978,0.0000018503348,0.000024797344,0.0000600887,0.99241984,0.00010695361],"about_ca_topic_score_codex":0.00014868999,"about_ca_topic_score_gemma":0.00009806168,"teacher_disagreement_score":0.9861134,"about_ca_system_score_codex":0.000040228544,"about_ca_system_score_gemma":0.0004853565,"threshold_uncertainty_score":0.4631974},"labels":[],"label_agreement":null},{"id":"W3121817941","doi":"10.3390/v13010119","title":"Respiratory Syncytial Virus G Protein Sequence Variability among Isolates from St. Petersburg, Russia, during the 2013–2014 Epidemic Season","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Virology; Biology; Virus; Genotype; Immune system; Immunity; Gene; Microbiology; Immunology; Genetics","score_opus":0.05721795636174734,"score_gpt":0.3454879586700051,"score_spread":0.2882700023082577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121817941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954172,0.0014428335,0.00020338575,0.00053765724,0.00024404113,0.0010277464,0.00016599215,0.0002390764,0.000722062],"genre_scores_gemma":[0.9969322,0.0001366643,0.00023172381,0.0010600449,0.00081186305,0.00028570043,0.000016055204,0.00007003978,0.00045567076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957704,0.0014422401,0.0006573115,0.00087249116,0.00060851703,0.00064905145],"domain_scores_gemma":[0.9969874,0.0006612222,0.00019340223,0.0015415602,0.0002974827,0.00031895982],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014195828,0.00035056035,0.00053181854,0.00014773468,0.000512003,0.00016250671,0.0003523587,0.00026303696,0.0028096847],"category_scores_gemma":[0.0023092697,0.00025970177,0.00022171115,0.0005577512,0.0005680949,0.00056775654,0.00032390797,0.0010588998,0.0005756685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023271446,0.00014793279,0.20925584,0.000104086386,0.00013111543,0.00019263316,0.00007730556,0.000041682753,0.7871267,0.00008613837,0.0019622692,0.0006415512],"study_design_scores_gemma":[0.001214225,0.00027093847,0.29741326,0.0003747183,0.00011192992,0.000028151415,0.00012498372,0.00038768526,0.6599268,0.0005708929,0.03914117,0.00043526755],"about_ca_topic_score_codex":0.004213292,"about_ca_topic_score_gemma":0.0006440663,"teacher_disagreement_score":0.12719993,"about_ca_system_score_codex":0.00045521403,"about_ca_system_score_gemma":0.00064648845,"threshold_uncertainty_score":0.9999855},"labels":[],"label_agreement":null},{"id":"W3122154892","doi":"10.3390/v13020157","title":"Serological Responses of Raccoons and Striped Skunks to Ontario Rabies Vaccine Bait in West Virginia during 2012–2016","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Wildlife Research Center; Virginia Department of Health; U.S. Department of Agriculture","keywords":"Seroprevalence; Rabies; Rabies vaccine; Rabies virus; Population; Serology; Veterinary medicine; Wildlife; Biology; Geography; Virology; Ecology; Antibody; Medicine; Immunology; Environmental health","score_opus":0.02135938166477868,"score_gpt":0.2667753771728938,"score_spread":0.2454159955081151,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3122154892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918646,0.005879387,0.000015329033,0.0015100677,0.0002621151,0.00016237039,0.00004540523,0.000036708887,0.00022398325],"genre_scores_gemma":[0.9940621,0.00029268797,0.00008343821,0.001200717,0.00002325762,0.000031379022,0.0000125687075,0.000009445328,0.0042844038],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99814445,0.00061567314,0.0004679635,0.00037619137,0.000023094348,0.00037261817],"domain_scores_gemma":[0.99846995,0.0010408913,0.000105681414,0.00029246608,0.000054707052,0.000036325888],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039157784,0.00018816673,0.00058915676,0.00015404969,0.00011545681,0.0000075260664,0.00015429355,0.00035445928,0.0018257237],"category_scores_gemma":[0.00082692795,0.00015546524,0.00006329361,0.00013862558,0.00013767058,0.00012773617,0.00017445085,0.00038028127,0.00017805398],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002875791,0.00011905084,0.4232231,0.000011948796,0.00012269434,0.000048058406,0.0004849859,0.000016686276,0.5709628,0.0004023409,0.001243663,0.0004888774],"study_design_scores_gemma":[0.0022489224,0.00021135857,0.88993645,0.00004966567,0.000034608798,0.00008141649,0.00024976462,3.123775e-7,0.07939359,0.00014215076,0.027491193,0.00016055642],"about_ca_topic_score_codex":0.003016594,"about_ca_topic_score_gemma":0.041175827,"teacher_disagreement_score":0.4915692,"about_ca_system_score_codex":0.000035765748,"about_ca_system_score_gemma":0.00014219385,"threshold_uncertainty_score":0.99908674},"labels":[],"label_agreement":null},{"id":"W3123236804","doi":"10.3390/v13020193","title":"Investigating the Diversity and Host Range of Novel Parvoviruses from North American Ducks Using Epidemiology, Phylogenetics, Genome Structure, and Codon Usage Analysis","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada; University of Guelph; Memorial University of Newfoundland","funders":"Ocean Frontier Institute","keywords":"Biology; Subfamily; Clade; Phylogenetic tree; Parvoviridae; Phylogenetics; Genome; Host (biology); Genetics; Evolutionary biology; Zoology; Virology; Parvovirus; Virus; Gene","score_opus":0.13115738507558286,"score_gpt":0.28513962950328847,"score_spread":0.1539822444277056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123236804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99703217,0.0018045296,0.000030916897,0.000091936316,0.000024011544,0.000069052134,0.000923409,0.000015297086,0.0000086860955],"genre_scores_gemma":[0.9975684,0.0006462562,0.000996419,0.00069420494,0.00008047515,0.0000011564465,0.000010436959,9.742128e-7,0.0000016437183],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99903375,0.0001848283,0.00021466384,0.00030439167,0.00008925165,0.00017309638],"domain_scores_gemma":[0.998579,0.00098768,0.00022936793,0.00007173354,0.000072099436,0.000060085487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014224245,0.00013555786,0.0003742836,0.000019103292,0.0010253128,0.000018818659,0.00011310983,0.00003753556,0.000028887645],"category_scores_gemma":[0.00042680115,0.00005487841,0.000066826346,0.0006826242,0.0009177822,0.00005852925,0.00076286774,0.00009538648,3.587643e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000463205,0.0000163171,0.86738724,0.000002340048,0.00022354416,5.427118e-7,0.00021864612,0.000046238976,0.13147525,0.000014055585,0.0000024992441,0.0006087106],"study_design_scores_gemma":[0.00006184614,0.000048370137,0.9962159,0.000003872516,0.00033161568,0.0000015445224,0.00066235464,0.00009732109,0.0022886714,0.000053759373,0.00012189257,0.00011287083],"about_ca_topic_score_codex":0.020201715,"about_ca_topic_score_gemma":0.042834993,"teacher_disagreement_score":0.12918659,"about_ca_system_score_codex":0.0000122653555,"about_ca_system_score_gemma":0.0000058594715,"threshold_uncertainty_score":0.9863228},"labels":[],"label_agreement":null},{"id":"W3123301455","doi":"10.3390/v13020196","title":"Antiviral Activity of the G-Quadruplex Ligand TMPyP4 against Herpes Simplex Virus-1","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Bill and Melinda Gates Foundation","keywords":"Herpes simplex virus; Virus; Viral replication; DNA; Nucleic acid; Chemistry; Virology; Biology; In vitro; G-quadruplex; DNA replication; Cell biology; Molecular biology; Biochemistry","score_opus":0.03472144938905297,"score_gpt":0.3117378075070978,"score_spread":0.2770163581180448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123301455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904623,0.00027755022,0.00002437577,0.00028083153,0.00024366158,0.0001916378,0.00008684368,0.00005350743,0.0083792815],"genre_scores_gemma":[0.99769616,0.0002890196,0.0001289433,0.00097454106,0.00011273567,0.0000124456,0.0000055316696,0.000023516654,0.0007570864],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99903315,0.000083960855,0.00020174643,0.00023818282,0.00022585632,0.00021709748],"domain_scores_gemma":[0.99915457,0.00008945182,0.00009755164,0.00049706735,0.00009642622,0.000064916574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007734338,0.00016249235,0.00030480593,0.000049335376,0.00015906586,0.000021727727,0.00007281348,0.00009143727,0.00015398998],"category_scores_gemma":[0.00012894705,0.00010829137,0.00019538538,0.00038111632,0.00013370285,0.000120315824,0.00009334515,0.00012635249,0.00007099588],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016268092,0.002150439,0.0638564,0.00012969416,0.0005837411,0.00013056169,0.00021547257,0.000009377848,0.44534403,0.00035679212,0.0020782452,0.48498255],"study_design_scores_gemma":[0.000787426,0.000049576032,0.07985077,0.00007061962,0.00009746923,0.000010105979,0.000030272873,0.000019456944,0.7200303,0.000045873796,0.19892257,0.00008553164],"about_ca_topic_score_codex":0.00037949457,"about_ca_topic_score_gemma":0.00028945057,"teacher_disagreement_score":0.48489705,"about_ca_system_score_codex":0.00004897903,"about_ca_system_score_gemma":0.00020561683,"threshold_uncertainty_score":0.4415994},"labels":[],"label_agreement":null},{"id":"W3123489061","doi":"10.3390/v13010139","title":"RSV and HMPV Infections in 3D Tissue Cultures: Mechanisms Involved in Virus-Host and Virus-Virus Interactions","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Novartis Institutes for BioMedical Research; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Human metapneumovirus; Virus; Virology; Biology; Respiratory tract; Immune system; Respiratory system; Metapneumovirus; Respiratory tract infections; Respiratory epithelium; Immunology","score_opus":0.059148547124732255,"score_gpt":0.39256033255943956,"score_spread":0.3334117854347073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123489061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99390084,0.002166524,0.0003342242,0.00046808503,0.00026471945,0.00058697106,0.00007109438,0.00010864021,0.0020989315],"genre_scores_gemma":[0.9907756,0.00440977,0.001053561,0.00216887,0.00017640594,0.00028392408,0.000030195386,0.00006769441,0.0010340195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800026,0.00028622287,0.00048805407,0.00055285107,0.00027532064,0.00039727878],"domain_scores_gemma":[0.9989123,0.00025458424,0.00007013321,0.0003872186,0.00014951844,0.00022625552],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032622996,0.00026062474,0.00042897035,0.0007627131,0.00020683905,0.00015032353,0.000072678755,0.000188759,0.0007162879],"category_scores_gemma":[0.00078381674,0.00024946177,0.00004690302,0.0011690989,0.00018810455,0.00063490786,0.00020157306,0.0007595728,0.00013798816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010702495,0.0006981388,0.037183408,0.00008737032,0.000058475653,0.0003046085,0.00049911026,0.000015189965,0.9547974,0.0012069922,0.00092055293,0.0041217287],"study_design_scores_gemma":[0.003297898,0.0008269824,0.09932185,0.000517712,0.000085396015,0.00037267062,0.0012987853,0.00023712238,0.6954947,0.0012747,0.19671647,0.0005556818],"about_ca_topic_score_codex":0.0053528356,"about_ca_topic_score_gemma":0.071362816,"teacher_disagreement_score":0.25930268,"about_ca_system_score_codex":0.00020384257,"about_ca_system_score_gemma":0.00020201335,"threshold_uncertainty_score":0.99999577},"labels":[],"label_agreement":null},{"id":"W3123628314","doi":"10.3390/v13020187","title":"Hematology and Clinical Chemistry Reference Ranges for Laboratory-Bred Natal Multimammate Mice (Mastomys natalensis)","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Mastomys; Biology; Rodent; Arenavirus; Lassa virus; Virus; Zoology; Muridae; Virology; Ecology; Immunology; Immune system","score_opus":0.03764598469488449,"score_gpt":0.3546146540553258,"score_spread":0.31696866936044127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123628314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987135,0.010747398,0.000058005637,0.0007994595,0.00014577691,0.0002503902,0.0005639372,0.00007953184,0.0002204808],"genre_scores_gemma":[0.9947991,0.00067890657,0.0010963115,0.0025959706,0.00026752776,0.00006080777,0.000111207286,0.00002885564,0.00036132586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988347,0.000044418146,0.00032415212,0.00043283353,0.000121116,0.00024276707],"domain_scores_gemma":[0.9987932,0.0003167465,0.000092997165,0.00031097708,0.00028424262,0.00020185429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013783455,0.00015803312,0.00044865545,0.0000193417,0.000068186266,0.000025575622,0.0000722248,0.00016841339,0.00016405561],"category_scores_gemma":[0.0007740755,0.00014183046,0.00010286054,0.00008334529,0.00012561577,0.000068004156,0.00006688983,0.00015085799,0.000023263476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009959277,0.0021898623,0.15335432,0.005053255,0.0019470922,0.002576191,0.00024703774,0.0000016969409,0.73300815,0.0027808954,0.028428128,0.06045411],"study_design_scores_gemma":[0.023758333,0.0004697766,0.046654247,0.00056413194,0.0015623831,0.00050606654,0.0010929548,0.0013046782,0.5733904,0.00014795539,0.34967363,0.0008754146],"about_ca_topic_score_codex":0.000015181179,"about_ca_topic_score_gemma":0.000015068917,"teacher_disagreement_score":0.3212455,"about_ca_system_score_codex":0.000012613219,"about_ca_system_score_gemma":0.00021640645,"threshold_uncertainty_score":0.5783678},"labels":[],"label_agreement":null},{"id":"W3127057938","doi":"10.3390/v13020261","title":"Identification of RSV Fusion Protein Interaction Domains on the Virus Receptor, Nucleolin","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Nucleolin; Fusion protein; Biology; Immunogold labelling; In vitro; Recombinant DNA; Virus; Virology; Cell biology; Cytoplasm; Immunology; Biochemistry; Antibody; Gene; Nucleolus","score_opus":0.08134392093391078,"score_gpt":0.3873067930336693,"score_spread":0.30596287209975853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127057938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960391,0.00009129696,0.00015845153,0.000913443,0.00018525407,0.0004921761,0.000013381196,0.000045705812,0.0020612048],"genre_scores_gemma":[0.99782085,0.00008842781,0.00006818883,0.0006555394,0.0001427645,0.000082674575,0.000008494023,0.000019590474,0.0011134687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873203,0.00023610807,0.00033332847,0.00020612865,0.00036536367,0.0001270309],"domain_scores_gemma":[0.998961,0.00012601716,0.00012562126,0.0004839497,0.00025503972,0.00004838184],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040052485,0.00008866038,0.0001371269,0.0001432866,0.00013314742,0.000038891725,0.00007894034,0.00006958324,0.0014503034],"category_scores_gemma":[0.00093512214,0.00006171871,0.00007386801,0.00045911947,0.000088302666,0.000142679,0.000051217674,0.0002578063,0.0007697632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002025645,0.0002976042,0.0006067367,0.00003543492,0.000029567862,0.0000058784876,0.000081099955,0.000008066332,0.9887094,0.0020828764,0.0020951477,0.005845608],"study_design_scores_gemma":[0.00026595662,0.00021637118,0.003734388,0.00012585252,0.0000131916895,0.000006001834,0.00017498441,0.00006104193,0.935279,0.00012499244,0.059946384,0.000051812138],"about_ca_topic_score_codex":0.00009502824,"about_ca_topic_score_gemma":0.000037100253,"teacher_disagreement_score":0.05785124,"about_ca_system_score_codex":0.000103957245,"about_ca_system_score_gemma":0.000101062484,"threshold_uncertainty_score":0.9994625},"labels":[],"label_agreement":null},{"id":"W3130122879","doi":"10.3390/v13020285","title":"Phylogeographic Genetic Diversity in the White Sucker Hepatitis B Virus across the Great Lakes Region and Alberta, Canada","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Environment and Climate Change Canada","funders":"U.S. Geological Survey; Wisconsin Department of Natural Resources","keywords":"Biology; Tissue tropism; Genetics; Genetic diversity; Virology; Evolutionary biology; Zoology; Virus; Tropism; Population","score_opus":0.027784153654034544,"score_gpt":0.25416711012552695,"score_spread":0.2263829564714924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130122879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916098,0.003274735,0.000005357671,0.0040656556,0.00013845193,0.00024619678,0.00006167443,0.000013134709,0.00058496266],"genre_scores_gemma":[0.98546815,0.005328694,0.000023525952,0.008689812,0.00008664684,0.000026138481,0.000006653706,0.000013298929,0.0003570594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99866855,0.000180002,0.000186494,0.00028603704,0.00034019092,0.00033874865],"domain_scores_gemma":[0.9990996,0.00028587205,0.000054138938,0.00040773864,0.00008945609,0.000063185704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012992832,0.00017292413,0.00025693577,0.000033622655,0.0006040264,0.000044934895,0.00014795344,0.00005717181,0.000054895754],"category_scores_gemma":[0.00017759502,0.00010586805,0.000053007323,0.00039147714,0.0002652508,0.000063611114,0.0003055236,0.00020265805,0.0000075015882],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022601138,0.00003109867,0.98781216,0.000026631802,0.0000667368,0.000633349,0.0039107143,0.0000044699045,0.00006345273,0.000031226136,0.006368709,0.0010288596],"study_design_scores_gemma":[0.0003931513,0.000043387463,0.95728904,0.000053198444,0.00007270162,0.00012592891,0.00062452647,0.00002021861,0.00022048058,0.000049609596,0.04098819,0.000119588454],"about_ca_topic_score_codex":0.9689123,"about_ca_topic_score_gemma":0.9991496,"teacher_disagreement_score":0.03461948,"about_ca_system_score_codex":0.000059484966,"about_ca_system_score_gemma":0.00014759124,"threshold_uncertainty_score":0.46457443},"labels":[],"label_agreement":null},{"id":"W3130724455","doi":"10.3390/v13020323","title":"Modeling Mongoose Rabies in the Caribbean: A Model-Guided Fieldwork Approach to Identify Research Priorities","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rabies; Mongoose; Biological dispersal; Context (archaeology); Geography; Transmission (telecommunications); Ecology; Epidemiology; Spatial epidemiology; Biology; Demography; Population; Medicine; Virology; Computer science; Sociology","score_opus":0.22927599800538875,"score_gpt":0.4177023430713261,"score_spread":0.18842634506593733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130724455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97288084,0.010788818,0.0054154512,0.0027620879,0.00031919914,0.00044349366,0.000021867487,0.000062300256,0.0073059574],"genre_scores_gemma":[0.99369186,0.00022029455,0.00040218947,0.0038945288,0.00007037476,0.00025107688,0.00002060943,0.000014176653,0.0014348808],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99687684,0.0015716397,0.00041359762,0.00044314962,0.000083006285,0.00061179907],"domain_scores_gemma":[0.99823946,0.0009767065,0.00003117529,0.00060059485,0.00012909544,0.000022984388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021421686,0.0001681614,0.00036807754,0.00016574717,0.00040913204,0.000051328145,0.0005362379,0.00035244325,0.00005049415],"category_scores_gemma":[0.0012012837,0.0001254173,0.00009908034,0.00038137572,0.00020453589,0.00012911178,0.00021648967,0.0008768754,0.00014247511],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010282574,0.0010262405,0.014251269,0.00017051911,0.00069347426,0.0001245982,0.03839512,0.41033185,0.2251423,0.19931844,0.10411778,0.0054001473],"study_design_scores_gemma":[0.016045114,0.0010725965,0.01923243,0.0010635589,0.00058230985,0.0016736231,0.17122938,0.26365724,0.12948085,0.23955181,0.151371,0.0050400808],"about_ca_topic_score_codex":0.0008313284,"about_ca_topic_score_gemma":0.00031902833,"teacher_disagreement_score":0.14667459,"about_ca_system_score_codex":0.000034831977,"about_ca_system_score_gemma":0.00015516077,"threshold_uncertainty_score":0.5114369},"labels":[],"label_agreement":null},{"id":"W3131721798","doi":"10.3390/v13020341","title":"Maternal Infection and Adverse Pregnancy Outcomes among Pregnant Travellers: Results of the International Zika Virus in Pregnancy Registry","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"National Center for Advancing Translational Sciences","keywords":"Medicine; Pregnancy; Zika virus; Outbreak; Obstetrics; Cohort study; Cohort; Adverse effect; Pediatrics; Demography; Virus; Internal medicine; Immunology; Virology","score_opus":0.019573194870392743,"score_gpt":0.2751696633962697,"score_spread":0.255596468525877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131721798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946196,0.0023416772,0.000008588787,0.000273277,0.00037970179,0.000339334,0.0001241722,0.000023581131,0.0018900665],"genre_scores_gemma":[0.99664384,0.0012211123,0.00003161369,0.00020117887,0.000042628446,0.000030313471,0.000011501838,0.000015086584,0.0018027227],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987975,0.000042965716,0.00040661407,0.00029608223,0.00029188336,0.00016498809],"domain_scores_gemma":[0.9992037,0.000051604748,0.00020052849,0.00038326337,0.00008987049,0.00007107289],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000062112566,0.00014600383,0.00026182088,0.00006849777,0.000038821774,0.000022523283,0.000112521804,0.00008079246,0.000095564144],"category_scores_gemma":[0.0002936563,0.000101002224,0.00013235411,0.00013417733,0.00009334879,0.00015328088,0.00010267935,0.00013831047,0.0000035597386],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023910773,0.00028601685,0.98066825,0.00014939008,0.00011584638,0.00011757424,0.00024919465,0.000013440017,0.0064111697,0.00013976215,0.000110422334,0.011499826],"study_design_scores_gemma":[0.0035008537,0.00005737183,0.96374774,0.004752352,0.00009403814,0.000015766565,0.00011910578,0.00010760915,0.026845844,0.000058311496,0.0006041227,0.000096904354],"about_ca_topic_score_codex":0.0015581877,"about_ca_topic_score_gemma":0.0013585889,"teacher_disagreement_score":0.020434676,"about_ca_system_score_codex":0.000042929234,"about_ca_system_score_gemma":0.00012385387,"threshold_uncertainty_score":0.41187513},"labels":[],"label_agreement":null},{"id":"W3131888277","doi":"10.3390/v13020289","title":"A Single Point Mutation, Asn16→Lys, Dictates the Temperature-Sensitivity of the Reovirus tsG453 Mutant","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Mutant; Biology; Gene; Amino acid; Genetics; Capsid; Mutation; Point mutation; Phenotype; Reverse genetics; Molecular biology","score_opus":0.036067160437314186,"score_gpt":0.30656223351598094,"score_spread":0.27049507307866677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131888277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874263,0.0009898072,0.00005352412,0.010611671,0.00017394267,0.00022518203,0.000075197684,0.000028705423,0.0004156886],"genre_scores_gemma":[0.9934963,0.00019295907,0.00019659699,0.005659275,0.00014283962,0.000012854925,0.000015311183,0.000015484855,0.00026837023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812025,0.0007482311,0.0003144578,0.00022572979,0.000277853,0.0003134556],"domain_scores_gemma":[0.9988508,0.00025813683,0.00010052276,0.00046193096,0.00023701128,0.00009159606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006392219,0.00012378834,0.00031066375,0.00003680333,0.0001450814,0.00002390611,0.000099093995,0.00006625019,0.00012380486],"category_scores_gemma":[0.003971091,0.000064438565,0.00015883312,0.00027478705,0.00034172944,0.00007279885,0.00013266181,0.00029823263,0.000023284341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019134645,0.00018306107,0.020080177,0.000041564876,0.00009142231,0.00030537357,0.000192968,0.00001543851,0.9713191,0.00017619113,0.0056116064,0.0017917737],"study_design_scores_gemma":[0.0009734959,0.00047546971,0.16054642,0.00026342625,0.00007877605,0.0011780655,0.0007543415,0.00014099332,0.8210896,0.00058692304,0.0138049275,0.00010752685],"about_ca_topic_score_codex":0.00040639323,"about_ca_topic_score_gemma":0.00054979976,"teacher_disagreement_score":0.15022944,"about_ca_system_score_codex":0.000043096665,"about_ca_system_score_gemma":0.00014748376,"threshold_uncertainty_score":0.47540537},"labels":[],"label_agreement":null},{"id":"W3132092684","doi":"10.3390/v13020334","title":"Improving the Inhibitory Effect of Phages against Pseudomonas aeruginosa Isolated from a Burn Patient Using a Combination of Phages and Antibiotics","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Vice Chancellor for Research and Technology, Hamadan University of Medical Sciences; Faculty of Medicine, McGill University","keywords":"Pseudomonas aeruginosa; Antibiotics; Microbiology; Bacteria; Phage therapy; Antibiotic resistance; Biology; Minimum inhibitory concentration; Bacteriophage; Pseudomonas; Escherichia coli","score_opus":0.009323474615874214,"score_gpt":0.23308331761762696,"score_spread":0.22375984300175275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132092684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99899584,0.00038810546,0.00013884141,0.000020109046,0.00018017429,0.00013493933,0.000060113165,0.000011367361,0.00007050667],"genre_scores_gemma":[0.99948686,0.000094781564,0.00027924526,0.00009368678,0.000015489128,5.1561386e-7,0.000008807861,0.000009445763,0.0000111351565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993018,0.00011466047,0.00021299809,0.0001677861,0.000098134544,0.00010460748],"domain_scores_gemma":[0.9994276,0.00018832501,0.00018620548,0.00015084521,0.000021125856,0.000025894244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007830748,0.00010360056,0.0001584411,0.000022211716,0.000097863944,0.000028824012,0.00006421537,0.000046238656,0.00011391529],"category_scores_gemma":[0.00005808988,0.00007681239,0.000043709082,0.00014935367,0.00015799525,0.00019886234,0.00016590486,0.00008715031,0.0000046975483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000233081,0.000082846054,0.0044336864,0.000019782403,0.000026653004,0.000006013646,0.00046889778,0.00007878898,0.98312974,0.0000015362896,0.00003541292,0.011693342],"study_design_scores_gemma":[0.0003125719,0.00013381954,0.011597827,0.000078016536,0.00005901058,0.000006335266,0.00017802537,0.0013534317,0.9860249,0.000004308654,0.00017590019,0.000075820535],"about_ca_topic_score_codex":0.0015847295,"about_ca_topic_score_gemma":0.00006867635,"teacher_disagreement_score":0.011617521,"about_ca_system_score_codex":0.000035500816,"about_ca_system_score_gemma":0.000010182856,"threshold_uncertainty_score":0.31323183},"labels":[],"label_agreement":null},{"id":"W3132374759","doi":"10.3390/v13020294","title":"Captivating Perplexities of Spinareovirinae 5′ RNA Caps","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"RNA; Computational biology; Biology; Non-coding RNA; RNA world hypothesis; Translation (biology); Genetics; Ribozyme; Messenger RNA; Gene","score_opus":0.0972971144471138,"score_gpt":0.3615238780769671,"score_spread":0.2642267636298533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132374759","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00084383535,0.9920633,0.000008797348,0.0000040018062,0.0003654561,0.000169689,0.00012880028,0.000024320341,0.00639179],"genre_scores_gemma":[0.00015830464,0.99761003,0.00041276557,0.000067592715,0.00010786848,0.000024935183,0.000028228547,0.00003434627,0.0015559298],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989276,0.0000773492,0.00041229452,0.00028139478,0.00010865459,0.00019270586],"domain_scores_gemma":[0.99928284,0.000077042685,0.0002919068,0.00029201797,0.000010671394,0.00004549527],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000067097775,0.00025859496,0.000829401,0.000046273846,0.00008562586,0.00003603951,0.00023004557,0.000121194804,0.009004323],"category_scores_gemma":[0.000053208056,0.0002015284,0.00034332508,0.0002005102,0.00015092235,0.0001704225,0.00031493246,0.0002155071,0.00040470413],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000010882641,0.000070795024,0.000015484193,0.0022209769,0.000083102794,0.000020248208,0.000167572,0.0000031234517,0.0028265726,0.00006644376,0.00468338,0.9898412],"study_design_scores_gemma":[0.000022913115,0.000024582865,0.00003494362,0.004323227,0.0001287016,0.000030043126,0.000084562715,2.2413042e-7,0.00044314616,0.0000025293637,0.9947128,0.00019230128],"about_ca_topic_score_codex":0.0021580465,"about_ca_topic_score_gemma":0.00010628709,"teacher_disagreement_score":0.99002945,"about_ca_system_score_codex":0.00013684868,"about_ca_system_score_gemma":0.00004302955,"threshold_uncertainty_score":0.9919016},"labels":[],"label_agreement":null},{"id":"W3132779470","doi":"10.3390/v13020349","title":"Dengue Virus Serotype 2 Intrahost Diversity in Patients with Different Clinical Outcomes","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Agence Nationale de la Recherche; International Development Research Centre","keywords":"Dengue fever; Virology; Biology; Serotype; Dengue virus; Arbovirus; Genetic diversity; Population; Amplicon; Genetics; Virus; Medicine; Gene; Polymerase chain reaction","score_opus":0.03791810505691805,"score_gpt":0.313802193056807,"score_spread":0.27588408799988895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132779470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99891645,0.00018809948,0.000013554209,0.00020025729,0.00019727845,0.00024977524,0.000047695845,0.00003483504,0.00015205737],"genre_scores_gemma":[0.99594074,0.00005843433,0.000028273455,0.0037263122,0.00007464722,0.000008124968,0.00003683295,0.000013764099,0.00011288469],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988979,0.00007356538,0.00025047455,0.000293411,0.0002756728,0.00020899466],"domain_scores_gemma":[0.99923456,0.00010541705,0.000057038953,0.00032223578,0.000102281796,0.0001784446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005864677,0.00014463573,0.00039728286,0.000043653967,0.000066418936,0.000017540991,0.00008418803,0.000071556984,0.00043807697],"category_scores_gemma":[0.00017981192,0.000099059434,0.00011585535,0.00011167406,0.000046423047,0.000065596454,0.000188228,0.0001758357,0.000046449113],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071661366,0.001325149,0.9934215,0.000021614422,0.0001332103,0.00011896276,0.000040370753,8.2578487e-7,0.000025126612,0.00007509728,0.00033718522,0.0037843438],"study_design_scores_gemma":[0.0051961886,0.00024883225,0.99279034,0.00005360316,0.00017827805,6.174209e-7,0.00004699723,0.0000075668945,0.0002129774,0.000018449331,0.0011265216,0.00011960511],"about_ca_topic_score_codex":0.0002185473,"about_ca_topic_score_gemma":0.0006135173,"teacher_disagreement_score":0.004479575,"about_ca_system_score_codex":0.000039537463,"about_ca_system_score_gemma":0.00007160257,"threshold_uncertainty_score":0.47966355},"labels":[],"label_agreement":null},{"id":"W3133740675","doi":"10.3390/v13030418","title":"Target Product Profile Analysis of COVID-19 Vaccines in Phase III Clinical Trials and Beyond: An Early 2021 Perspective","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Pandemic; Virology; Clinical trial; Coronavirus disease 2019 (COVID-19); Collateral damage; Coronavirus; Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Disease; Infectious disease (medical specialty); Internal medicine","score_opus":0.316226191290811,"score_gpt":0.5733481916547342,"score_spread":0.2571220003639232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133740675","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013063808,0.98319155,0.000021131487,0.00011623411,0.00015179209,0.0025893496,0.000591816,0.000032365948,0.00024194864],"genre_scores_gemma":[0.00019961158,0.9917323,0.00030831585,0.006132644,0.0008825237,0.00041208928,0.00018667149,0.00007740491,0.00006843154],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9913413,0.0036107663,0.0025569722,0.0014147592,0.00064626103,0.00042996104],"domain_scores_gemma":[0.9941294,0.0030919183,0.00092341716,0.001106635,0.0005092146,0.00023938897],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0074601355,0.0005237233,0.008220752,0.0019747345,0.000068478854,0.00007313585,0.0003182923,0.00043835977,0.00047697366],"category_scores_gemma":[0.022169942,0.0003813889,0.0013645985,0.0035874262,0.0002246901,0.00018302441,0.00019907895,0.0008469756,0.000017113314],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034585746,0.007657301,0.037893176,0.019026097,0.022935653,0.0014907226,0.0024454717,5.279476e-7,0.0005514923,0.0005905449,0.0032641653,0.90068626],"study_design_scores_gemma":[0.0055087735,0.0010584559,0.0001769863,0.0015684136,0.013653623,0.000019383135,0.00086093595,0.000026002068,0.00040610097,0.000045301178,0.9762255,0.0004505311],"about_ca_topic_score_codex":0.0020770004,"about_ca_topic_score_gemma":0.00031377096,"teacher_disagreement_score":0.9729613,"about_ca_system_score_codex":0.00027327886,"about_ca_system_score_gemma":0.004585201,"threshold_uncertainty_score":0.9998638},"labels":[],"label_agreement":null},{"id":"W3133777478","doi":"10.3390/v13030388","title":"Adenovirus Core Proteins: Structure and Function","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Capsid; Function (biology); Viral replication; Adenovirus genome; Adenoviridae; RNA splicing; Virology; Mastadenovirus; Computational biology; Viral protein; Gene; RNA; Cell biology; Genetic enhancement; Virus; Genetics","score_opus":0.07445896405995635,"score_gpt":0.36698743472769363,"score_spread":0.2925284706677373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133777478","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0030681766,0.99566036,0.000016147696,0.0000052617856,0.00016451444,0.00071579457,0.00029528432,0.000020751126,0.000053698004],"genre_scores_gemma":[0.00009245305,0.99767226,0.000074942414,0.00026022622,0.0006671215,0.00012133034,0.0006432287,0.000096252545,0.00037219212],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99830467,0.00019448905,0.00029553627,0.00067641557,0.00022218225,0.0003067035],"domain_scores_gemma":[0.99899817,0.000020451951,0.00014934555,0.0006345994,0.00008399635,0.00011343054],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013319256,0.00040181752,0.00070818875,0.00010455214,0.00010732883,0.000075766395,0.00024548147,0.0005697452,0.0002394262],"category_scores_gemma":[0.00008826701,0.00033203702,0.00019967473,0.00020251266,0.00011275741,0.000004125876,0.00023414665,0.00033673755,0.000030665055],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016903544,0.00002907362,0.00000791983,0.002421155,0.00037982335,0.000014658258,0.0000046243504,5.9383603e-7,0.021451743,0.00003292251,0.002026253,0.9734622],"study_design_scores_gemma":[0.00018491024,0.0009983885,0.0000018744634,0.0009945789,0.00018108083,0.00004799195,0.0000049524665,2.466241e-7,0.009348631,0.000021059865,0.9878729,0.00034337078],"about_ca_topic_score_codex":0.000015439105,"about_ca_topic_score_gemma":0.00009105947,"teacher_disagreement_score":0.98584664,"about_ca_system_score_codex":0.000025453046,"about_ca_system_score_gemma":0.0004558598,"threshold_uncertainty_score":0.99991316},"labels":[],"label_agreement":null},{"id":"W3135956255","doi":"10.3390/v13030494","title":"SARS-CoV-2 Infections in Animals: Reservoirs for Reverse Zoonosis and Models for Study","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"National Institute of Allergy and Infectious Diseases; European Commission; Economic and Social Research Council; National Institutes of Health; Biotechnology and Biological Sciences Research Council; Public Health England; University of Liverpool; Royal Society; National Institute for Health Research Health Protection Research Unit; National Institute for Health and Care Research; University of Oxford; UK Research and Innovation","keywords":"Mink; Zoonosis; Outbreak; Biology; Virology; Virus; Pandemic; Transmission (telecommunications); Coronavirus; Captivity; Zoology; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Medicine; Disease; Ecology","score_opus":0.33943234528443755,"score_gpt":0.4910960187286504,"score_spread":0.15166367344421283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135956255","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008153386,0.9840604,0.00017810774,0.000047892776,0.0001360193,0.006860866,0.0002679706,0.00006663941,0.00022869141],"genre_scores_gemma":[0.00031105065,0.98374754,0.000595087,0.007421711,0.00037021757,0.007306467,0.000025731535,0.00018134253,0.00004085157],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974989,0.00020990244,0.0007138502,0.0007969147,0.00029720858,0.00048319256],"domain_scores_gemma":[0.9976822,0.0012409559,0.00015960596,0.0006230846,0.00025304404,0.000041124298],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00086470344,0.00042180897,0.0019743775,0.000729837,0.00014651036,0.00009084458,0.00020410812,0.00032945152,0.000003577124],"category_scores_gemma":[0.0012377745,0.00035629107,0.00046581015,0.0008026649,0.00008649066,0.00017034204,0.00019847475,0.00041921923,0.000012835398],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012290005,0.009559754,0.0062925406,0.15764639,0.0037626603,0.00042628034,0.0020459988,0.0000027034434,0.0015610446,0.0016841805,0.03474063,0.78104883],"study_design_scores_gemma":[0.0017691115,0.0010362923,0.0000047977637,0.0053087017,0.0010821813,0.000028742234,0.0003138256,0.000082001025,0.0004119524,0.00022271428,0.98942184,0.00031782675],"about_ca_topic_score_codex":0.0008638773,"about_ca_topic_score_gemma":0.0012147179,"teacher_disagreement_score":0.9546812,"about_ca_system_score_codex":0.00024058315,"about_ca_system_score_gemma":0.00088422606,"threshold_uncertainty_score":0.9998889},"labels":[],"label_agreement":null},{"id":"W3136020393","doi":"10.3390/v13030493","title":"Resurrection of a Viral Internal Ribosome Entry Site from a 700 Year Old Ancient Northwest Territories Cripavirus","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Internal ribosome entry site; Biology; Ribosome; Eukaryotic translation; Translation (biology); Start codon; Genetics; Shine-Dalgarno sequence; Footprinting; RNA; Virology; Messenger RNA; DNA; Gene","score_opus":0.03385747658455818,"score_gpt":0.2680799648871917,"score_spread":0.23422248830263354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3136020393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99226594,0.0008934377,8.236474e-7,0.00014945705,0.0004635815,0.000073583135,0.00571557,0.000050149607,0.00038745522],"genre_scores_gemma":[0.9980358,0.0005721506,0.000050497132,0.00025484335,0.0005662359,0.000013049835,0.00027020983,0.0000012220769,0.0002360172],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986812,0.00011338673,0.00023703328,0.0003063819,0.00038507304,0.00027693677],"domain_scores_gemma":[0.9993746,0.0002572914,0.0000857993,0.0000780449,0.0001193737,0.000084852625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011164217,0.00013326365,0.00021990782,0.000019064133,0.00014465256,0.00007548589,0.00018166077,0.00006368446,0.00035422193],"category_scores_gemma":[0.0002148331,0.000058302427,0.000094777664,0.00025810997,0.00011266533,0.00019836746,0.00022613758,0.00014596111,0.000074947464],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011242992,0.00011207119,0.18697669,0.00000543787,0.00003786487,0.00003113803,0.00017033222,9.077676e-7,0.80856514,0.00006491023,0.0016393414,0.00228375],"study_design_scores_gemma":[0.00016562737,0.0001430079,0.55244386,0.00006693723,0.000012510121,0.0000039203587,0.0003476479,0.0000068219874,0.37089214,0.00017662306,0.07560422,0.00013665551],"about_ca_topic_score_codex":0.041334596,"about_ca_topic_score_gemma":0.030444926,"teacher_disagreement_score":0.437673,"about_ca_system_score_codex":0.000040875282,"about_ca_system_score_gemma":0.000017897402,"threshold_uncertainty_score":0.98724693},"labels":[],"label_agreement":null},{"id":"W3137052056","doi":"10.3390/v13040543","title":"Genetic and Antigenic Characterization of Avian Avulavirus Type 6 (AAvV-6) Circulating in Canadian Wild Birds (2005–2017)","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Environment and Climate Change Canada; Canadian Food Inspection Agency","funders":"","keywords":"Biology; Genotype; Virology; Genotyping; Hemagglutinin (influenza); Virus; Genome; Antigen; Gene; Genetics","score_opus":0.038476657759421364,"score_gpt":0.24952392502734605,"score_spread":0.2110472672679247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137052056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986814,0.0005841698,8.0524904e-7,0.000115221424,0.000089705456,0.000071867864,0.000043026423,0.000018645593,0.00039515557],"genre_scores_gemma":[0.9989959,0.00061206374,0.000040671108,0.00021764822,0.000072000854,0.0000034495736,0.000013122081,0.0000013072968,0.00004384531],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99929714,0.000045631783,0.00017191039,0.0001828361,0.00007258806,0.00022992046],"domain_scores_gemma":[0.99972945,0.000037022528,0.00005633314,0.00004101166,0.00006081889,0.00007538398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000783388,0.00008466572,0.0001344594,0.00003157407,0.00014923105,0.000026238982,0.00005420196,0.0000601021,0.00020610943],"category_scores_gemma":[0.000085123385,0.00004436477,0.000022381455,0.00040137174,0.000051816685,0.00008691128,0.000040231374,0.000057867444,0.0000216773],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000020807825,0.000011624957,0.46457398,0.0000035606638,0.0000054215807,0.000006838931,0.000037737227,0.0000011855049,0.53122956,0.000043777847,0.00000772714,0.0040764986],"study_design_scores_gemma":[0.000041749616,0.00004016649,0.9814746,0.000024231467,0.000006831176,0.000010190716,0.000070111215,0.000025718726,0.0103881,0.000034470104,0.0077885613,0.00009526752],"about_ca_topic_score_codex":0.11854213,"about_ca_topic_score_gemma":0.59590435,"teacher_disagreement_score":0.5208415,"about_ca_system_score_codex":0.000036081132,"about_ca_system_score_gemma":0.00004181923,"threshold_uncertainty_score":0.88732755},"labels":[],"label_agreement":null},{"id":"W3137633265","doi":"10.3390/v13030511","title":"Comparative Analysis of Within-Host Mutation Patterns and Diversity of Hepatitis C Virus Subtypes 1a, 1b, and 3a","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; AIDS Vancouver","funders":"National Institute of Allergy and Infectious Diseases; National Science Foundation","keywords":"Biology; Mutation rate; Genetics; Mutation; Host (biology); Evolutionary dynamics; Viral quasispecies; Viral evolution; Virus; Genetic diversity; Natural selection; Virology; Genetic variation; Hepatitis C virus; Negative selection; Evolutionary biology; Selection (genetic algorithm); Population; RNA; Gene; Genome; Medicine","score_opus":0.06141458205964859,"score_gpt":0.34562065258625385,"score_spread":0.2842060705266053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137633265","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981733,0.00066200446,0.00013327312,0.000051750063,0.000023216544,0.00012734706,0.00044539478,0.000011138674,0.0003725849],"genre_scores_gemma":[0.9980635,0.0013853012,0.00031121922,0.00012608235,0.000011756648,0.0000029160472,0.000049085553,0.0000056717263,0.00004448175],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895257,0.00011754499,0.00025082502,0.00021953175,0.00034330605,0.00011621025],"domain_scores_gemma":[0.9990886,0.00020454304,0.00012295316,0.00018102027,0.00030597748,0.00009691044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014901391,0.00009672377,0.000512984,0.00027738322,0.000077321405,0.000012835938,0.000044353386,0.000055208086,0.00021523514],"category_scores_gemma":[0.00015549561,0.00009061249,0.000057208752,0.0005543011,0.00019351594,0.00012280834,0.00018727024,0.00009635928,0.000003842211],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110096655,0.00013042857,0.9668763,0.00009963044,0.0009288825,0.00007398192,0.0034277074,0.000008577836,0.027544662,0.00010645883,0.00005052067,0.0006427297],"study_design_scores_gemma":[0.0005680302,0.00018766147,0.83772475,0.000049576454,0.0006567314,0.0000035471223,0.0004147059,0.0008836616,0.15934333,0.000018497523,0.00008101249,0.00006851085],"about_ca_topic_score_codex":0.021983404,"about_ca_topic_score_gemma":0.0264776,"teacher_disagreement_score":0.13179867,"about_ca_system_score_codex":0.00002533301,"about_ca_system_score_gemma":0.00007182222,"threshold_uncertainty_score":0.99128664},"labels":[],"label_agreement":null},{"id":"W3137762787","doi":"10.3390/v13040541","title":"Pathogenic and Transmission Potential of Wildtype and Chicken Embryo Origin (CEO) Vaccine Revertant Infectious Laryngotracheitis Virus","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; Provincial Laboratory of Public Health; Fonds de Recherche du Québec - Santé; Ministry of Agriculture; Université de Montréal; University of Calgary","funders":"Alberta Agriculture and Forestry","keywords":"Virology; Biology; Attenuated vaccine; Virulence; Virus; Viral shedding; Outbreak; Vaccination; Transmission (telecommunications); Pathogen; Wild type; Microbiology; Genetics; Gene","score_opus":0.013925798221026842,"score_gpt":0.2732332042835224,"score_spread":0.2593074060624955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137762787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99193126,0.006648537,0.00018252789,0.00011233194,0.00011069144,0.0002335753,0.000043334872,0.00005182912,0.0006859414],"genre_scores_gemma":[0.99065703,0.008103987,0.0005364765,0.00029488158,0.00007308557,0.000012666474,0.000020480984,0.000025622063,0.0002757585],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999071,0.00006404178,0.00028003476,0.0002776889,0.00014090033,0.0001663426],"domain_scores_gemma":[0.99946797,0.000043683594,0.0000686139,0.0001979565,0.000075843716,0.00014590603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009367868,0.0001665803,0.00040254794,0.00009755764,0.000109466964,0.00001913705,0.000021363001,0.00011598869,0.00032845204],"category_scores_gemma":[0.0000458938,0.00013289443,0.0000823935,0.00020489673,0.000039455066,0.000108503475,0.00002951558,0.00013710302,0.00001122189],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005643097,0.0010660545,0.08740271,0.00026869678,0.0006348198,0.0007131809,0.00024033459,0.0000040380633,0.7381465,0.00020230682,0.00024108635,0.17051598],"study_design_scores_gemma":[0.019317973,0.0014967978,0.58136386,0.0006395496,0.001965436,0.0033947704,0.000090496345,0.00021492573,0.29686058,0.0005319237,0.09357335,0.0005503645],"about_ca_topic_score_codex":0.0005525495,"about_ca_topic_score_gemma":0.00012383079,"teacher_disagreement_score":0.49396116,"about_ca_system_score_codex":0.00002245247,"about_ca_system_score_gemma":0.000097236225,"threshold_uncertainty_score":0.54192775},"labels":[],"label_agreement":null},{"id":"W3138297312","doi":"10.3390/v13030506","title":"A Roadmap for Genome-Based Phage Taxonomy","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":587,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Taxonomy (biology); Podoviridae; Siphoviridae; Myoviridae; Bacteriophage; Genome; Virus classification; Biology; Evolutionary biology; Subfamily; Computational biology; Genetics; Zoology; Gene","score_opus":0.04738585963275471,"score_gpt":0.2658169528118727,"score_spread":0.21843109317911796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3138297312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95983,0.00020901528,0.020340798,0.00066520483,0.00056487083,0.00057943497,0.00025807103,0.00010623307,0.017446365],"genre_scores_gemma":[0.9774676,0.000011479939,0.012825038,0.0052045393,0.00011549963,0.00019070736,0.00003704571,0.000019745343,0.004128342],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995296,0.000013483472,0.000093888266,0.00017802198,0.000038274306,0.00014675374],"domain_scores_gemma":[0.9997294,0.000034651315,0.00003158814,0.00015077276,0.0000066558796,0.000046928293],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000033632816,0.000069577676,0.0000726082,0.00001122817,0.00009703715,0.000042951015,0.000078322824,0.00002686864,0.01071291],"category_scores_gemma":[0.000017609294,0.000067598885,0.000066146575,0.000077948105,0.000038173876,0.00014251276,0.000049355396,0.00003959173,0.00087736436],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010206376,0.000075807904,0.00038702897,0.000004021141,0.000006807749,0.000005808258,0.000017948885,0.00009775091,0.9903148,0.000017102071,0.005212019,0.003850723],"study_design_scores_gemma":[0.00018140611,0.000018971872,0.0070737414,0.0000031860045,0.000008429683,0.0000034896757,0.0000175403,0.000040358733,0.21103074,0.000011642681,0.7815364,0.000074105985],"about_ca_topic_score_codex":0.00014125787,"about_ca_topic_score_gemma":0.00020591928,"teacher_disagreement_score":0.77928406,"about_ca_system_score_codex":0.0000562286,"about_ca_system_score_gemma":0.00001631359,"threshold_uncertainty_score":0.9999006},"labels":[],"label_agreement":null},{"id":"W3138552287","doi":"10.3390/v13030455","title":"Common Oral Medications Lead to Prophage Induction in Bacterial Isolates from the Human Gut","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Prophage; Microbiology; Biology; Lytic cycle; Antibiotics; Lysogenic cycle; Bacteriophage; Bacteria; Microbiome; Bacteroides fragilis; Antimicrobial; Virology; Virus; Genetics; Escherichia coli; Gene","score_opus":0.03373428834537683,"score_gpt":0.3005747815298323,"score_spread":0.26684049318445546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3138552287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968229,0.00002188028,0.000023095829,0.0017939792,0.00039584728,0.0001261961,0.000050108505,0.000023432092,0.0007425813],"genre_scores_gemma":[0.99772966,0.0000114081795,0.00030233437,0.0013501127,0.00014119798,0.000024769335,0.00004739214,0.000008980188,0.00038415246],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993728,0.00007642149,0.00016286518,0.00019333098,0.00006466268,0.00012995904],"domain_scores_gemma":[0.9996522,0.000040257375,0.000038627182,0.00022368724,0.000005649693,0.00003957651],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000063185995,0.00007700721,0.00008780554,0.000015940272,0.00017393188,0.00007138892,0.00015539645,0.000044436852,0.007595815],"category_scores_gemma":[0.000026274227,0.000059209233,0.000026725622,0.00019435224,0.00007032893,0.00024650808,0.00015658808,0.00013336107,0.00091347774],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000057967954,0.00007675385,0.005533356,5.09795e-7,0.0000062326067,0.0000031941036,0.000518688,0.00001010603,0.9867031,0.000017762575,0.0040867953,0.0030377188],"study_design_scores_gemma":[0.00017676098,0.000029652538,0.6882014,0.000023625364,0.00001524225,0.000006049525,0.00026464736,0.0000075511216,0.19934456,0.00011977977,0.1116954,0.000115296076],"about_ca_topic_score_codex":0.010079647,"about_ca_topic_score_gemma":0.02593661,"teacher_disagreement_score":0.7873585,"about_ca_system_score_codex":0.00007839785,"about_ca_system_score_gemma":0.0000119839115,"threshold_uncertainty_score":0.9998644},"labels":[],"label_agreement":null},{"id":"W3141471119","doi":"10.3390/v13050797","title":"Characterization of Extracellular Vesicles Secreted in Lentiviral Producing HEK293SF Cell Cultures","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; McGill University","funders":"Canada Research Chairs","keywords":"HEK 293 cells; Cell biology; Cell culture; Biogenesis; Context (archaeology); Microvesicles; Biology; Extracellular vesicle; Cell; Embryonic stem cell; Extracellular; Chemistry; Molecular biology; Biochemistry; Gene; Genetics; microRNA","score_opus":0.01251018962627196,"score_gpt":0.25128212062692995,"score_spread":0.238771931000658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3141471119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99470294,0.0043553095,0.00040339286,0.000028432469,0.000097658034,0.0001371563,0.000045360513,0.0000132638015,0.0002164637],"genre_scores_gemma":[0.99806345,0.00026433938,0.0004649165,0.0001127299,0.00012596103,0.000012198245,0.00035180396,0.000026176538,0.000578435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988966,0.000121326724,0.00028638492,0.00037722493,0.0001308298,0.00018763512],"domain_scores_gemma":[0.99935514,0.0000073914907,0.0001247318,0.00038267684,0.00008271688,0.00004734464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000129421,0.00013684147,0.0001458018,0.000045162218,0.000033000575,0.000022285942,0.00013584046,0.00010900922,0.000044153818],"category_scores_gemma":[0.00010902254,0.00014448623,0.000070962524,0.00016764674,0.00006065498,0.000013947724,0.000101093436,0.00007387876,0.0000084549665],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050499828,0.00020161504,0.014178819,0.0000802121,0.000014825748,0.000028286153,0.00013659787,0.00003185307,0.9846126,0.000044921973,0.0000669386,0.00055286055],"study_design_scores_gemma":[0.00035912654,0.00004009704,0.0146875065,0.000036800157,0.000015388654,0.000003649548,0.000091346126,0.000027588418,0.9800057,0.00003273034,0.0045409766,0.0001591186],"about_ca_topic_score_codex":0.000014141616,"about_ca_topic_score_gemma":0.000021863529,"teacher_disagreement_score":0.004606898,"about_ca_system_score_codex":0.000009874989,"about_ca_system_score_gemma":0.0000908038,"threshold_uncertainty_score":0.5891977},"labels":[],"label_agreement":null},{"id":"W3143870303","doi":"10.3390/v13040590","title":"Establishment of a Genetically Confirmed Breeding Colony of Mastomys natalensis from Wild-Caught Founders from West Africa","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; Conservatoire National des Arts et Métiers; Public Health Agency of Canada","keywords":"Mastomys; Enzootic; Biology; Lassa fever; Lassa virus; Outbreak; Transmission (telecommunications); Virology; Natural reservoir; Zoology; Rodent; Virus; Ecology","score_opus":0.048342166700746425,"score_gpt":0.29231658631879787,"score_spread":0.24397441961805144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3143870303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98545617,0.0027832405,0.00036805635,0.002380306,0.00032311096,0.00026814252,0.00094457215,0.000038116603,0.0074382885],"genre_scores_gemma":[0.99326867,0.00035828393,0.004147458,0.0016900912,0.00019311045,0.000011393095,0.00014826859,0.00002613412,0.00015658898],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998236,0.00007524201,0.000540292,0.0003439214,0.0005026931,0.00030182552],"domain_scores_gemma":[0.998203,0.0005282691,0.00018615405,0.00044238227,0.00028804163,0.0003521757],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014127731,0.00016281019,0.000560064,0.00009083045,0.000040480798,0.000026701111,0.00012360855,0.00011029957,0.003943576],"category_scores_gemma":[0.00052745093,0.00015106013,0.00013264896,0.00029511628,0.00017796252,0.00008955527,0.00009560682,0.00012380749,0.000024605706],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004933362,0.008881134,0.2908803,0.0027585055,0.0055242176,0.0015407566,0.01221607,0.00008030127,0.45803052,0.012837254,0.08962904,0.11268856],"study_design_scores_gemma":[0.01303774,0.0017301494,0.41828874,0.0025093968,0.0023434153,0.00003241493,0.014932195,0.00092028006,0.090381406,0.0033986375,0.45144328,0.0009823655],"about_ca_topic_score_codex":0.0042688167,"about_ca_topic_score_gemma":0.00035879985,"teacher_disagreement_score":0.3676491,"about_ca_system_score_codex":0.00006268272,"about_ca_system_score_gemma":0.00094127393,"threshold_uncertainty_score":0.99696696},"labels":[],"label_agreement":null},{"id":"W3145607668","doi":"10.3390/v13040581","title":"RNA Interference Therapy for Chronic Hepatitis B Predicts the Importance of Addressing Viral Integration When Developing Novel Cure Strategies","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"","keywords":"HBsAg; Hepatitis B virus; RNA interference; Medicine; Virus; Virology; RNA; Chronic infection; Chronic hepatitis; Viral load; Hepatitis B; Hepatitis C virus; Immunology; Biology; Gene; Immune system; Genetics","score_opus":0.21148637305195542,"score_gpt":0.4101121537226212,"score_spread":0.1986257806706658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3145607668","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039708192,0.98629636,0.01024893,0.00014080203,0.00042254038,0.0018365536,0.00037102395,0.00007115637,0.00021557757],"genre_scores_gemma":[0.0017459841,0.99278045,0.0035118933,0.00034812273,0.00056604255,0.00067917,0.00022381036,0.00008562412,0.000058907077],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99761766,0.00012153464,0.0010604815,0.000500997,0.00033651388,0.00036279095],"domain_scores_gemma":[0.99768066,0.00051453715,0.0008094201,0.0005342905,0.00041137723,0.000049687813],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031249743,0.00053178566,0.0019228813,0.00014613543,0.0001949463,0.00011476056,0.00033298804,0.00026801287,0.0000665823],"category_scores_gemma":[0.0004525292,0.00032775346,0.0004115885,0.00026835097,0.0002513109,0.00029204003,0.00013656425,0.0004591019,0.0000046402524],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003065622,0.00008075904,0.0008279145,0.013307212,0.0009327032,0.000011267814,0.0010574147,7.499382e-7,0.00028455397,0.0036029126,0.0025873198,0.97727656],"study_design_scores_gemma":[0.0006338774,0.000489783,0.00035014865,0.09782714,0.00076645555,0.00003443162,0.00013955095,0.000040895695,0.0010720022,0.00025766314,0.897926,0.00046211443],"about_ca_topic_score_codex":0.0007902847,"about_ca_topic_score_gemma":0.005585588,"teacher_disagreement_score":0.97681445,"about_ca_system_score_codex":0.00038270958,"about_ca_system_score_gemma":0.0028794294,"threshold_uncertainty_score":0.99991745},"labels":[],"label_agreement":null},{"id":"W3149473495","doi":"10.3390/v13040593","title":"Probing into the Effects of Grapevine Leafroll-Associated Viruses on the Physiology, Fruit Quality and Gene Expression of Grapes","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Disease; Host (biology); Gene; Genome; Wine; Virology; Genetics; Medicine; Pathology","score_opus":0.14447782141571905,"score_gpt":0.3653569594751752,"score_spread":0.22087913805945616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3149473495","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19200887,0.8066883,4.7464557e-8,0.000081511556,0.00006534654,0.00073277514,0.0003831255,0.00002297758,0.000017012417],"genre_scores_gemma":[0.0076864474,0.99175316,0.000005060787,0.0002138378,0.00008520463,0.00016951861,0.000062989835,0.0000032026942,0.00002060347],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963459,0.0019240509,0.000579345,0.0004308706,0.0004184589,0.0003014176],"domain_scores_gemma":[0.9881795,0.010798323,0.0006802261,0.00018279342,0.000113540045,0.000045600602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084690447,0.00036333408,0.0014754311,0.000030978874,0.0003938547,0.000036972448,0.0006052027,0.00020902208,0.000034977336],"category_scores_gemma":[0.0024980593,0.000086768356,0.00036772675,0.0005717263,0.00049782346,0.000059396418,0.00055314996,0.00036250564,0.000004599635],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027071643,0.00018558609,0.00006302576,0.0026686247,0.00032837864,0.0000024290205,0.0001757323,1.4898934e-7,0.81670946,0.0001303912,0.00091623946,0.17879288],"study_design_scores_gemma":[0.00028447525,0.001032769,0.006230402,0.028532684,0.00059322367,0.0000032081464,0.00039576297,5.4910294e-7,0.29489982,0.0005611393,0.6667182,0.0007477863],"about_ca_topic_score_codex":0.00069858023,"about_ca_topic_score_gemma":0.00031143043,"teacher_disagreement_score":0.66580194,"about_ca_system_score_codex":0.000023323277,"about_ca_system_score_gemma":0.000031509797,"threshold_uncertainty_score":0.35383108},"labels":[],"label_agreement":null},{"id":"W3150400184","doi":"10.3390/v13040601","title":"Phylogenetic Clustering among Asylum Seekers with New HIV-1 Diagnoses in Montreal, QC, Canada","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Centre Intégré de Santé et de Services Sociaux des Laurentides; Centre intégré de santé et de services sociaux de Chaudière-Appalaches; Centre Hospitalier de l’Université de Montréal; McGill University; Jewish General Hospital; Santé Montérégie; Université de Montréal; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé","keywords":"Genotyping; Phylogenetic tree; Population; Demography; Transmission (telecommunications); Cluster analysis; Cohort; Cluster (spacecraft); Medicine; Biology; Genotype; Genetics; Sociology; Computer science; Internal medicine","score_opus":0.013354058426971098,"score_gpt":0.23172004036258592,"score_spread":0.21836598193561482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3150400184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992961,0.005418478,0.000021190202,0.00022660746,0.00010380037,0.00013771046,0.000113714224,0.000019999594,0.0009974838],"genre_scores_gemma":[0.9958227,0.00033924705,0.000043592576,0.00024097777,0.000019406638,0.000032545893,0.000107742846,0.0000136491235,0.0033801305],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99906975,0.00008847432,0.0001337169,0.0002564045,0.000047075322,0.00040460774],"domain_scores_gemma":[0.9995401,0.00013744395,0.000030126852,0.00021678384,0.000025603425,0.00004997863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003023901,0.00013849085,0.00019144171,0.000053610867,0.00007966109,0.00001848814,0.00010252898,0.00006681278,0.00066477124],"category_scores_gemma":[0.000047481546,0.0001120983,0.000022917837,0.00014646631,0.0000802239,0.000049209302,0.00006816417,0.00014274145,0.00026132626],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012937498,0.00014257141,0.94078416,0.000017119497,0.000254395,0.001075711,0.00019792064,0.00030141915,0.022345379,0.000004812028,0.027462455,0.0072846697],"study_design_scores_gemma":[0.0022273522,0.00014133877,0.88877046,0.000080473284,0.000025378507,0.000054463457,0.00046138847,0.0000031869347,0.0791184,0.000009999705,0.028912647,0.00019490466],"about_ca_topic_score_codex":0.80565673,"about_ca_topic_score_gemma":0.9914328,"teacher_disagreement_score":0.18577605,"about_ca_system_score_codex":0.0001056113,"about_ca_system_score_gemma":0.00069667806,"threshold_uncertainty_score":0.7278779},"labels":[],"label_agreement":null},{"id":"W3153392639","doi":"10.3390/v13040654","title":"Role of Myeloid Cells in Oncolytic Reovirus-Based Cancer Therapy","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beatrice Hunter Cancer Research Institute; Dalhousie University","funders":"Canadian Institutes of Health Research; Dalhousie Medical Research Foundation","keywords":"Oncolytic virus; Myeloid; Virotherapy; Cancer research; Myeloid cells; Tumor microenvironment; Cancer; Cancer cell; Immunology; Biology; Medicine; Virology; Tumor cells; Internal medicine","score_opus":0.06333113346375059,"score_gpt":0.3893319550887629,"score_spread":0.3260008216250123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153392639","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008674002,0.9898543,0.000001896518,0.0000069793073,0.00012557152,0.0007562218,0.00034169908,0.000011789539,0.00022755004],"genre_scores_gemma":[0.00035950053,0.99802405,0.000056047087,0.00033756657,0.00027456615,0.0003835906,0.00018119303,0.00013190566,0.00025159214],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971899,0.0005409886,0.00070466823,0.0007333839,0.0003543515,0.0004767124],"domain_scores_gemma":[0.9983652,0.00009216021,0.00032606564,0.0009824109,0.00012427058,0.00010984595],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042370512,0.00048756573,0.0013187503,0.00027588106,0.000039870676,0.000031488493,0.00066966645,0.0005540562,0.0003766924],"category_scores_gemma":[0.000048549933,0.00042826997,0.00053549954,0.00053058943,0.00014278352,0.000003895064,0.00013604484,0.00035525672,0.000037742335],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039049165,0.00023972976,0.000066092056,0.0013684029,0.00024461446,0.000011141361,0.000012925728,0.000054390734,0.22916718,0.0000027889648,0.0005362012,0.76790607],"study_design_scores_gemma":[0.0004109232,0.00062154274,0.0000037034129,0.0014925355,0.000038969425,0.0000011880553,0.000007329555,0.0000023853152,0.3020843,0.0000027524525,0.69503003,0.00030432522],"about_ca_topic_score_codex":0.0002929236,"about_ca_topic_score_gemma":0.00089709216,"teacher_disagreement_score":0.7676017,"about_ca_system_score_codex":0.000107279164,"about_ca_system_score_gemma":0.0024273389,"threshold_uncertainty_score":0.9998169},"labels":[],"label_agreement":null},{"id":"W3153836535","doi":"10.3390/v13071229","title":"How Do Enveloped Viruses Exploit the Secretory Proprotein Convertases to Regulate Infectivity and Spread?","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Proprotein Convertases; Infectivity; Biology; Exploit; Furin; Virology; Cell biology; Proprotein convertase; Computational biology; Virus; Computer science; Computer security; Biochemistry; Enzyme; Lipoprotein; Cholesterol","score_opus":0.13893503291041523,"score_gpt":0.3942802723503706,"score_spread":0.25534523943995535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153836535","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007169656,0.9882652,0.000043259843,0.0002234997,0.00016614958,0.0035521744,0.00013106114,0.00015054093,0.0002984589],"genre_scores_gemma":[0.00037109273,0.95962393,0.00012492447,0.03674216,0.0006772106,0.0018703847,0.000015738984,0.0002088667,0.0003656742],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965956,0.0006027721,0.00047243576,0.00097361597,0.0007564623,0.0005990742],"domain_scores_gemma":[0.9973253,0.00083318405,0.00022120657,0.001247068,0.00022213868,0.00015108303],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006430803,0.00069925183,0.0021588039,0.0003618188,0.00023102986,0.0004144057,0.00038381634,0.00040791783,0.00006458293],"category_scores_gemma":[0.0017499186,0.00042309015,0.0003945438,0.0008020421,0.0003552858,0.00023167381,0.00057632255,0.0008317274,0.00017914074],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012085972,0.0002035734,0.0009509184,0.016470974,0.00085764675,0.00045377138,0.0002592222,1.6163122e-8,0.0018231089,0.00029357977,0.003568153,0.9749982],"study_design_scores_gemma":[0.0003720943,0.00023644556,0.00004771236,0.0066724317,0.00094505434,0.00014922829,0.0000831278,7.496589e-7,0.010426502,0.000020731934,0.9805731,0.0004728012],"about_ca_topic_score_codex":0.00051187637,"about_ca_topic_score_gemma":0.00011820535,"teacher_disagreement_score":0.97700495,"about_ca_system_score_codex":0.0002176099,"about_ca_system_score_gemma":0.0015271074,"threshold_uncertainty_score":0.9998221},"labels":[],"label_agreement":null},{"id":"W3154920950","doi":"10.3390/v13040694","title":"New World Cactaceae Plants Harbor Diverse Geminiviruses","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Arizona State University","keywords":"Biology; Genome; Phylogenetic tree; RefSeq; Virus classification; Plant virus; Genetics; Phylogenetics; Virology; Virus; Gene","score_opus":0.08947170035573457,"score_gpt":0.2907139131187276,"score_spread":0.201242212762993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154920950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98765653,0.0021911229,0.0000018819863,0.0012451035,0.0002936303,0.00013861316,0.0013493443,0.00019428336,0.006929475],"genre_scores_gemma":[0.96934974,0.0037506607,0.00046423695,0.004755549,0.0018815494,0.00002637605,0.00012794242,0.0000044211006,0.019639524],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99863815,0.00007711098,0.00015866931,0.0003439377,0.00035036798,0.0004317426],"domain_scores_gemma":[0.9990856,0.0005243433,0.00004919059,0.0000804543,0.000051790666,0.00020863891],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009372396,0.00016670671,0.00021232257,0.000023020553,0.00027314268,0.00011929942,0.00027221724,0.000049763297,0.0036633075],"category_scores_gemma":[0.00020027506,0.000065318716,0.000078090045,0.00042121875,0.00005357971,0.00023128462,0.00029965705,0.00014298064,0.00086569524],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044023316,0.000057471487,0.011079878,0.0000039253136,0.000048405356,0.00012959089,0.00003990298,9.45977e-7,0.7472291,0.00012046023,0.2176359,0.023610398],"study_design_scores_gemma":[0.00012701537,0.000038351576,0.0642837,0.000029643012,0.000008784198,0.000004840104,0.00018455733,0.000002320397,0.19942574,0.000094668845,0.7356059,0.00019447546],"about_ca_topic_score_codex":0.0012755956,"about_ca_topic_score_gemma":0.013412137,"teacher_disagreement_score":0.54780334,"about_ca_system_score_codex":0.000026919608,"about_ca_system_score_gemma":0.00004179699,"threshold_uncertainty_score":0.99991226},"labels":[],"label_agreement":null},{"id":"W3156266189","doi":"10.3390/v13040697","title":"Characteristics of Anti-SARS-CoV-2 Antibodies in Recovered COVID-19 Subjects","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Regional Laboratory Medicine Program; Hamilton Health Sciences; Public Health Ontario; University of Toronto; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Antibody; Serology; Virology; Population; Titer; Immunology; Immunoglobulin G; Coronavirus; Biology; Immune system; Real-time polymerase chain reaction; Virus; Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Polymerase chain reaction; Immunity; Coronavirus disease 2019 (COVID-19); Disease; Infectious disease (medical specialty); Gene; Internal medicine","score_opus":0.1048446428531251,"score_gpt":0.3929046748112381,"score_spread":0.28806003195811297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3156266189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99661016,0.0009063797,0.00004443943,0.00032656553,0.00020722194,0.00024552242,0.00012628853,0.00006432008,0.0014690966],"genre_scores_gemma":[0.9161662,0.00019952397,0.00017144131,0.08325258,0.00012218891,0.00001380386,0.000016726617,0.000033904194,0.000023645525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981451,0.00012484142,0.00048283624,0.00040020884,0.00044077833,0.0004062566],"domain_scores_gemma":[0.9987425,0.0003535354,0.00012524133,0.0005174968,0.0002106991,0.000050511328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034104928,0.00020019089,0.00063453475,0.00033962977,0.00005554992,0.000036694317,0.00016441474,0.00015303482,0.000035647925],"category_scores_gemma":[0.0027149734,0.00018840682,0.00012396414,0.00069766585,0.00017819152,0.0001348999,0.0001403738,0.00026967068,0.00009989804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023322544,0.00022894802,0.41552162,0.00038774707,0.000041449068,0.00065930426,0.00022617768,7.653651e-8,0.58140755,0.0000976566,0.00063414156,0.0005620984],"study_design_scores_gemma":[0.0013884867,0.00012260754,0.08256387,0.00015909743,0.00003159469,0.00005524062,0.00013129739,0.000026212805,0.7967062,0.00014143172,0.11851606,0.00015789224],"about_ca_topic_score_codex":0.0009222713,"about_ca_topic_score_gemma":0.00036027617,"teacher_disagreement_score":0.33295774,"about_ca_system_score_codex":0.00013796022,"about_ca_system_score_gemma":0.0012357252,"threshold_uncertainty_score":0.7683007},"labels":[],"label_agreement":null},{"id":"W3156941576","doi":"10.3390/v13040678","title":"The Intersection of Age and Influenza Severity: Utility of Ferrets for Dissecting the Age-Dependent Immune Responses and Relevance to Age-Specific Vaccine Development","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research; Genome Canada","keywords":"Vaccination; Virus; Immunology; Disease; Immune system; Virology; Biology; Viral shedding; Influenza A virus; Host factors; Medicine; Internal medicine","score_opus":0.24397029596642011,"score_gpt":0.4503424569568433,"score_spread":0.20637216099042316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3156941576","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03860948,0.9586208,0.000048317466,0.000045302728,0.00021744917,0.0022955264,0.000067015564,0.000024650755,0.00007145689],"genre_scores_gemma":[0.0057583177,0.99280334,0.0005391155,0.00012031986,0.00009469141,0.00038871396,0.00000986421,0.000050338956,0.00023531714],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970746,0.0004451334,0.0011515291,0.0004964419,0.00046538806,0.00036689112],"domain_scores_gemma":[0.9946237,0.003830308,0.0004325421,0.00065475906,0.00037957632,0.00007911656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021198522,0.00038758153,0.0016287379,0.00015691553,0.00046151486,0.00007293607,0.00023916087,0.00014320077,0.000009461927],"category_scores_gemma":[0.0073965243,0.00021759314,0.0002032502,0.00037773995,0.00026966675,0.000070567534,0.0006576177,0.00047248384,0.0000016353071],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014237071,0.00007335654,0.00025488186,0.01102564,0.0008044257,0.00008634015,0.0021066966,1.9586294e-7,0.00063668913,0.000051970346,0.00047822032,0.98305786],"study_design_scores_gemma":[0.00051212806,0.00019732352,0.008854787,0.010582399,0.0002688574,0.00004483772,0.000793526,8.986454e-7,0.0014506626,0.00002475985,0.9770745,0.00019533777],"about_ca_topic_score_codex":0.00010203514,"about_ca_topic_score_gemma":0.0003562268,"teacher_disagreement_score":0.98286253,"about_ca_system_score_codex":0.00015892758,"about_ca_system_score_gemma":0.00027295362,"threshold_uncertainty_score":0.8873191},"labels":[],"label_agreement":null},{"id":"W3157204862","doi":"10.3390/v13050810","title":"Identification of the Begomoviruses Squash Leaf Curl Virus and Watermelon Chlorotic Stunt Virus in Various Plant Samples in North America","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Arizona State University","keywords":"Biology; Begomovirus; Plant virus; Whitefly; Leaf curl; Botany; Genome; Geminiviridae; Virology; Virus; Genetics","score_opus":0.04470936242403766,"score_gpt":0.2592459365097323,"score_spread":0.21453657408569465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157204862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99623847,0.0013397781,0.0000012276015,0.00030012554,0.00008810491,0.00028993134,0.001691619,0.000023867446,0.000026862266],"genre_scores_gemma":[0.9956924,0.0037965244,0.000012640222,0.00030951385,0.000044308883,0.000048125974,0.00006219927,0.0000020888622,0.00003224264],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99808025,0.00027021332,0.0004801994,0.0004073185,0.00037818574,0.00038379992],"domain_scores_gemma":[0.99904287,0.00053962076,0.00015856829,0.00013723402,0.00006214346,0.00005953986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024537308,0.00018738455,0.00034013466,0.00005105097,0.00017617538,0.0000806845,0.00034305305,0.0000660439,0.000072850715],"category_scores_gemma":[0.000412902,0.0000736814,0.000058050806,0.0008312485,0.0002478119,0.00019388612,0.00036915438,0.00019851272,0.000022530307],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006542256,0.00021851428,0.1092593,0.00002576365,0.000017810245,0.000026323509,0.0005171111,0.000026952064,0.8829951,0.00003514014,0.00014361895,0.0066689006],"study_design_scores_gemma":[0.00015805507,0.000059653044,0.6950236,0.00004844494,0.000008780191,0.000006107327,0.00044638282,0.00004098385,0.29879668,0.0001673471,0.0050924593,0.00015148046],"about_ca_topic_score_codex":0.010880579,"about_ca_topic_score_gemma":0.21236637,"teacher_disagreement_score":0.58576435,"about_ca_system_score_codex":0.00005220212,"about_ca_system_score_gemma":0.00003136375,"threshold_uncertainty_score":0.9957061},"labels":[],"label_agreement":null},{"id":"W3158649326","doi":"10.3390/v13050734","title":"Oral Rabies Vaccination of Small Indian Mongooses (Urva auropunctata) with ONRAB via Ultralite Baits","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Rabies; Rabies virus; Biology; Virology; Vaccination; Titer; Rabies vaccine; Veterinary medicine; Virus; Medicine","score_opus":0.025758612778039078,"score_gpt":0.2527905368008602,"score_spread":0.22703192402282113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158649326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992945,0.0044463086,0.0006617304,0.0005258807,0.00034646638,0.0001637167,0.000073247895,0.00008170158,0.0007559575],"genre_scores_gemma":[0.9967362,0.00021396554,0.0002788813,0.0011836903,0.000027828572,0.00002635349,0.00014329344,0.000018400176,0.0013713831],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837446,0.00056239526,0.0003730751,0.00032416312,0.00003160516,0.00033432746],"domain_scores_gemma":[0.99877346,0.00049315067,0.00021187453,0.00032573775,0.00017038989,0.000025374442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026478758,0.0002052671,0.00049051415,0.00009848406,0.00014054633,0.00000967767,0.0001853698,0.00026687537,0.000787569],"category_scores_gemma":[0.00032362295,0.00015772093,0.00008729936,0.00019693201,0.00020477314,0.00015314504,0.000044755863,0.00024847395,0.00018907568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001077303,0.0003814141,0.23969771,0.00009752207,0.0011013263,0.00008138883,0.0012049446,0.000119875695,0.71635085,0.0056924545,0.002592556,0.03160267],"study_design_scores_gemma":[0.0027736817,0.000506968,0.3671781,0.00006776777,0.00017788062,0.0001990762,0.0006133113,0.000006157564,0.5911645,0.0011669116,0.035762206,0.000383391],"about_ca_topic_score_codex":0.00030371503,"about_ca_topic_score_gemma":0.0009618998,"teacher_disagreement_score":0.1274804,"about_ca_system_score_codex":0.000017402139,"about_ca_system_score_gemma":0.00009621361,"threshold_uncertainty_score":0.8623328},"labels":[],"label_agreement":null},{"id":"W3161380745","doi":"10.3390/v13050934","title":"Vector Surveillance, Host Species Richness, and Demographic Factors as West Nile Disease Risk Indicators","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Arbovirus; West Nile virus; Vector (molecular biology); Disease; Geography; Host (biology); Population; Species richness; Biology; Environmental health; Ecology; Virology; Medicine; Virus","score_opus":0.010893097216909795,"score_gpt":0.24850011233846747,"score_spread":0.23760701512155769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3161380745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98497826,0.012857048,0.000007605865,0.0003444057,0.00023718212,0.00023096889,0.0005934461,0.000117818316,0.0006332898],"genre_scores_gemma":[0.9952874,0.0028911445,0.000011241454,0.00088274747,0.0002663561,0.000026839158,0.00009577482,0.000035796224,0.00050270895],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99860096,0.000092755974,0.00022911713,0.0004472272,0.0003171666,0.00031279546],"domain_scores_gemma":[0.9986378,0.00017837354,0.00011452324,0.0004466418,0.00006854828,0.0005541255],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008023221,0.00023689338,0.00037968255,0.00017484526,0.00017968826,0.000081494494,0.00008895937,0.00007240787,0.0012169813],"category_scores_gemma":[0.0005744462,0.00019160443,0.00016953044,0.000557647,0.00016218924,0.000103886814,0.000074649506,0.00016647555,0.00005690899],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019179563,0.00020995154,0.99528444,0.000077156066,0.00014251808,0.0001873035,0.00005633303,4.111381e-7,0.0013002648,0.0004392294,0.0014742395,0.0006363427],"study_design_scores_gemma":[0.00096153514,0.00008051732,0.9416463,0.0000455519,0.00026137292,0.000005173594,0.00032381172,0.000007381946,0.00064182543,0.00005357111,0.055764966,0.00020803594],"about_ca_topic_score_codex":0.00015534699,"about_ca_topic_score_gemma":0.00013449103,"teacher_disagreement_score":0.054290727,"about_ca_system_score_codex":0.000020276824,"about_ca_system_score_gemma":0.00022597771,"threshold_uncertainty_score":0.999696},"labels":[],"label_agreement":null},{"id":"W3161632896","doi":"10.3390/v13050927","title":"Exploring the Role of Glycans in the Interaction of SARS-CoV-2 RBD and Human Receptor ACE2","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Los Alamos National Laboratory; National Institute of Allergy and Infectious Diseases","keywords":"Glycan; Mutation; Biology; Virus; Computational biology; Host (biology); Plasma protein binding; Virology; Glycoprotein; Cell biology; Genetics; Gene","score_opus":0.20201841680048463,"score_gpt":0.402977506302766,"score_spread":0.2009590895022814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3161632896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967146,0.0005364367,0.0000025126903,0.0002509101,0.000062288265,0.00013793867,0.000004368585,0.000008405325,0.0022825224],"genre_scores_gemma":[0.9943801,0.000034125318,0.00001854197,0.005442468,0.000076872086,0.000033452605,7.9902446e-7,0.000009359152,0.0000042907677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992329,0.000104502804,0.00018737494,0.00012730315,0.00022817038,0.0001197384],"domain_scores_gemma":[0.9993875,0.00022413317,0.0000495362,0.00026376007,0.00006903714,0.0000060544307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000272387,0.000068145244,0.00015462127,0.0000840076,0.00004427726,0.000015076045,0.000106080464,0.000026515116,0.000009201234],"category_scores_gemma":[0.00019317472,0.000040784,0.00004250061,0.00027258374,0.00009432828,0.00012765505,0.00006238579,0.00018284882,0.000007016951],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011599266,0.00010018997,0.03872411,0.000048161546,0.00002536238,0.000006509005,0.0027143804,1.1870269e-7,0.95208025,0.0005136984,0.00010391497,0.0055673374],"study_design_scores_gemma":[0.00032980545,0.000107757114,0.00751374,0.00010813279,0.000015070141,0.0000084873645,0.0063679353,0.000009408636,0.8807575,0.00014165058,0.10460651,0.000033966975],"about_ca_topic_score_codex":0.0013843438,"about_ca_topic_score_gemma":0.0005849006,"teacher_disagreement_score":0.10450259,"about_ca_system_score_codex":0.000024615147,"about_ca_system_score_gemma":0.00006349562,"threshold_uncertainty_score":0.2092723},"labels":[],"label_agreement":null},{"id":"W3162342300","doi":"10.3390/v13050865","title":"Evaluation of the Stability of Bacteriophages in Different Solutions Suitable for the Production of Magistral Preparations in Belgium","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Environment Research Council; Vlaamse regering; Universiteit Gent; Institute of Genetics; Universitair Ziekenhuis Gent","keywords":"Infectivity; Trehalose; Titer; Chemistry; Microbiology; Bacteriophage; Biology; Virology; Virus; Escherichia coli; Biochemistry","score_opus":0.08632695864431611,"score_gpt":0.3180741460053008,"score_spread":0.2317471873609847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162342300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986463,0.00008626957,0.00003713235,0.00031420027,0.00024338685,0.0004783803,0.00007447538,0.000001985115,0.00011786516],"genre_scores_gemma":[0.99973947,0.000019382796,0.000066959605,0.000008463156,0.000012047245,0.00006693254,0.0000039968013,0.0000029872954,0.000079740115],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992018,0.00015708565,0.00027558813,0.00012499809,0.00014787616,0.00009268539],"domain_scores_gemma":[0.99944365,0.00011241837,0.00012272983,0.00025051256,0.00006309357,0.000007574926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054595363,0.00005153508,0.0000985327,0.000016773654,0.000056772635,0.000005833909,0.00009234015,0.000024708532,0.00056796253],"category_scores_gemma":[0.0003863011,0.000032833632,0.000054285847,0.00020701355,0.00014657759,0.00015961246,0.00007628421,0.000053952383,9.310145e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013483579,0.00029042322,0.026513983,0.000014777007,0.0000074700874,1.37038025e-8,0.00051047804,0.0015443413,0.9702623,0.00003309254,0.000097111624,0.0007125618],"study_design_scores_gemma":[0.00008511778,0.000011776253,0.58097404,0.00001828908,0.00002824382,4.821947e-7,0.00021144463,0.00025520715,0.4181989,0.00007185642,0.0001257749,0.000018837667],"about_ca_topic_score_codex":0.0015661905,"about_ca_topic_score_gemma":0.02265449,"teacher_disagreement_score":0.55446005,"about_ca_system_score_codex":0.00011797091,"about_ca_system_score_gemma":0.000045262263,"threshold_uncertainty_score":0.99517953},"labels":[],"label_agreement":null},{"id":"W3163743132","doi":"10.3390/v13050926","title":"Hepatitis E Virus in People Who Use Crack-Cocaine: A Cross-Sectional Study in a Remote Region of Northern Brazil","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Hepatitis E virus; Environmental health; Medicine; Feces; Epidemiology; Cohort; Logistic regression; Hepatitis E; Cross-sectional study; Genotype; Immunology; Virology; Internal medicine; Biology; Pathology","score_opus":0.06875775733997627,"score_gpt":0.36032799481130523,"score_spread":0.29157023747132893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163743132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982034,0.0005171945,0.00006820473,0.00021402659,0.00022539131,0.00042341973,0.00004096801,0.000035248304,0.0002721536],"genre_scores_gemma":[0.990913,0.006507296,0.00019709357,0.0019124494,0.0001221696,0.000026292922,0.000016938511,0.000034547873,0.0002702665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975758,0.00031211556,0.000944247,0.00050567643,0.00027630245,0.0003858378],"domain_scores_gemma":[0.9984336,0.0005871156,0.00018722605,0.00044215427,0.00026145877,0.00008847414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044675436,0.00021389003,0.00087315467,0.00024101394,0.00007428021,0.000022841055,0.00009310952,0.00016044878,0.00010909463],"category_scores_gemma":[0.0027946725,0.00020454165,0.00012568673,0.0007203596,0.00011938734,0.00019569678,0.00015267495,0.00031984586,0.00003503571],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003707207,0.00070588745,0.9943406,0.00006941113,0.000080318605,0.0009818322,0.0013644958,0.00011532088,0.00096364104,0.00003746435,0.0003588259,0.00061146624],"study_design_scores_gemma":[0.0022009574,0.00045055532,0.9948044,0.00015496733,0.000023464168,0.00009946555,0.000192259,0.00031701516,0.00033509728,0.00008977912,0.0011658296,0.00016619844],"about_ca_topic_score_codex":0.33068028,"about_ca_topic_score_gemma":0.8027265,"teacher_disagreement_score":0.47204623,"about_ca_system_score_codex":0.00022210393,"about_ca_system_score_gemma":0.00022337848,"threshold_uncertainty_score":0.83409667},"labels":[],"label_agreement":null},{"id":"W3164101420","doi":"10.3390/v13060962","title":"Evaluation of Dried Blood Spot Testing for SARS-CoV-2 Serology Using a Quantitative Commercial Assay","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Liver Centre; University of Toronto; University Health Network","funders":"University of Toronto; Toronto General and Western Hospital Foundation","keywords":"Phlebotomy; Dried blood spot; Antibody; Dried blood; Serology; Medicine; Whole blood; Concordance; Immunology; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Internal medicine; Chromatography; Chemistry","score_opus":0.41903801452561074,"score_gpt":0.4555389836155085,"score_spread":0.03650096908989775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164101420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99602515,0.00026026907,0.002062539,0.00005438458,0.00025433442,0.00038956435,0.000017012413,0.00007136444,0.0008654077],"genre_scores_gemma":[0.9692035,5.267919e-7,0.02807672,0.002516987,0.00014128255,0.00002559794,0.0000053893377,0.000027822982,0.000002199936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852407,0.00029880885,0.00036185456,0.00025049126,0.00036389803,0.00020088565],"domain_scores_gemma":[0.9969116,0.0011740681,0.00022695337,0.00017855407,0.0014889049,0.00001994456],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0014637831,0.00012717141,0.0003334407,0.00013653375,0.00011987831,0.000015005376,0.000044079985,0.00010024907,0.000013822184],"category_scores_gemma":[0.013471842,0.00013123927,0.0000816818,0.0004338158,0.0000726598,0.00008936376,0.000033023647,0.00012818357,0.000005718821],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114803894,0.00017580477,0.013213664,0.000057809815,0.00014825462,0.000014308464,0.00031728484,0.000022966251,0.98028445,0.00016317364,0.000029253395,0.005458199],"study_design_scores_gemma":[0.0027345833,0.00036616248,0.0034913106,0.00015109847,0.001037841,0.00015822059,0.00019795817,0.027598832,0.96333337,0.00060403167,0.0002158406,0.000110750094],"about_ca_topic_score_codex":0.00024947018,"about_ca_topic_score_gemma":0.00022400456,"teacher_disagreement_score":0.027575865,"about_ca_system_score_codex":0.00005549698,"about_ca_system_score_gemma":0.00045567722,"threshold_uncertainty_score":0.9948381},"labels":[],"label_agreement":null},{"id":"W3165391777","doi":"10.3390/v13060951","title":"Novel Biomarkers of Hepatitis B Virus and Their Use in Chronic Hepatitis B Patient Management","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"HBsAg; Medicine; Hepatitis B virus; Hepatitis B; Natural history; Disease; Immunology; Virology; Liver disease; Biomarker; Antigen; Viral hepatitis; Virus; Internal medicine; Biology","score_opus":0.07896752189198954,"score_gpt":0.3258333551734917,"score_spread":0.2468658332815022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165391777","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005416163,0.99098444,0.000037510315,0.000011311156,0.00027788634,0.0017235657,0.0011360062,0.000053339376,0.00035980096],"genre_scores_gemma":[0.0007394211,0.9972781,0.00094810216,0.0002240759,0.00007600703,0.00038208385,0.0001548146,0.000118580545,0.00007882482],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99686265,0.00018618169,0.0013006118,0.0007769773,0.00037870236,0.0004948506],"domain_scores_gemma":[0.9980905,0.00040264908,0.0004918704,0.00074913516,0.000116386844,0.00014944747],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001919429,0.0007161446,0.0030456618,0.000692697,0.000070285656,0.00004523088,0.00015903385,0.00028796782,0.00014207044],"category_scores_gemma":[0.00018523849,0.000571723,0.00042198243,0.00078140787,0.00026122548,0.00016397818,0.0005205248,0.00033107807,0.000027896456],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015156211,0.0002996285,0.015694363,0.02298704,0.0019961898,0.00033779908,0.00024369622,4.2265606e-7,0.000066627355,0.00014409247,0.0012081092,0.9570069],"study_design_scores_gemma":[0.000628602,0.00032842756,0.00691693,0.047318757,0.0009288592,0.000078218225,0.000024614335,0.000008284978,0.00016686457,0.00000425897,0.94308984,0.0005063348],"about_ca_topic_score_codex":0.061616465,"about_ca_topic_score_gemma":0.06637503,"teacher_disagreement_score":0.95650053,"about_ca_system_score_codex":0.0007710587,"about_ca_system_score_gemma":0.0003799212,"threshold_uncertainty_score":0.9996734},"labels":[],"label_agreement":null},{"id":"W3166120929","doi":"10.3390/v13061102","title":"HERC5 and the ISGylation Pathway: Critical Modulators of the Antiviral Immune Response","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health","keywords":"ISG15; Biology; Immune system; Ubiquitin ligase; Virology; Interferon; Ubiquitin; Intrinsic immunity; Innate immune system; Antiviral drug; Viral replication; Virus; Viral protein; Hepatitis C virus; Immunology; Gene; Genetics","score_opus":0.04132067381634929,"score_gpt":0.3311429949108011,"score_spread":0.28982232109445183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3166120929","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051382417,0.99300885,0.0000057810203,0.00014726834,0.0010279574,0.00039523776,0.0001090732,0.000021460586,0.00014615714],"genre_scores_gemma":[0.026307382,0.9718472,0.0000053636204,0.00013393172,0.000026641383,0.000036919348,0.00001789111,0.00003393117,0.0015907453],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9938977,0.004888587,0.00064796046,0.00027092683,0.00005178877,0.00024305195],"domain_scores_gemma":[0.99580085,0.0032113604,0.00025690623,0.00064593356,0.00007653107,0.000008394252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009873564,0.00030681328,0.0012804518,0.00009932386,0.00024497818,0.000031779116,0.00037044048,0.00044622974,0.00018710773],"category_scores_gemma":[0.0020792517,0.00014912224,0.0005595193,0.00021248154,0.0014096277,0.000068375346,0.00035479324,0.00057154696,0.000085563195],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00488724,0.00026463583,0.000019117064,0.0033670713,0.0016476589,0.000015254591,0.001039176,1.9679996e-7,0.027431168,0.03631498,0.001708719,0.9233048],"study_design_scores_gemma":[0.00057055516,0.000076611774,0.00011705689,0.0039029783,0.0003578443,0.00012515164,0.00011403212,3.5936839e-7,0.009923549,0.000039436265,0.98459023,0.0001822186],"about_ca_topic_score_codex":0.000058788086,"about_ca_topic_score_gemma":0.0000022736892,"teacher_disagreement_score":0.9828815,"about_ca_system_score_codex":0.000029641242,"about_ca_system_score_gemma":0.00031123543,"threshold_uncertainty_score":0.60810286},"labels":[],"label_agreement":null},{"id":"W3167263937","doi":"10.3390/v13061141","title":"Modeling within-Host SARS-CoV-2 Infection Dynamics and Potential Treatments","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Virus; Cytokine storm; Immune system; Immunology; Effector; Innate immune system; In silico; Virology; Acquired immune system; Biology; Immunity; Medicine; Coronavirus disease 2019 (COVID-19); Computational biology; Infectious disease (medical specialty)","score_opus":0.06028873816725928,"score_gpt":0.36236868685540774,"score_spread":0.30207994868814847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3167263937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960011,0.00037593208,0.0022961146,0.00008681644,0.00019696762,0.0001634248,0.000017095526,0.000084683,0.0007778317],"genre_scores_gemma":[0.9822807,0.000049037757,0.00027058227,0.017180812,0.00013629449,0.000015848445,0.0000106431235,0.000028706212,0.00002738461],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989848,0.00004024511,0.00018368025,0.00029872265,0.00027159264,0.00022097336],"domain_scores_gemma":[0.9995626,0.000026947799,0.000028471271,0.00022667684,0.000128435,0.000026830849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009557645,0.00014014971,0.00020405586,0.0001208533,0.00011665227,0.000067879875,0.000035887926,0.00010193874,0.0000069346916],"category_scores_gemma":[0.00013050323,0.00012377521,0.000063292784,0.00021830983,0.00003981204,0.00014996536,0.000074001044,0.00016888924,0.000070315706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026417006,0.0002793986,0.08177625,0.00008484181,0.00019677726,0.00034753952,0.0001822629,0.00003380636,0.91295916,0.00025268027,0.00005006171,0.0035730375],"study_design_scores_gemma":[0.0017609587,0.00023806171,0.0026089784,0.000102866936,0.00017830482,0.00022243502,0.00011375227,0.16629124,0.8262643,0.00020088289,0.0018398301,0.0001783555],"about_ca_topic_score_codex":0.001446314,"about_ca_topic_score_gemma":0.0004785313,"teacher_disagreement_score":0.16625744,"about_ca_system_score_codex":0.00013329195,"about_ca_system_score_gemma":0.0001912499,"threshold_uncertainty_score":0.50474066},"labels":[],"label_agreement":null},{"id":"W3167550255","doi":"10.3390/v13061057","title":"The Potential of Phage Therapy against the Emerging Opportunistic Pathogen Stenotrophomonas maltophilia","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences; Alberta Innovates; University of Alberta","keywords":"Stenotrophomonas maltophilia; Phage therapy; Microbiology; Virulence; Biology; Stenotrophomonas; Pathogen; Multiple drug resistance; Isolation (microbiology); Antimicrobial; Bacteriophage; Antibiotic resistance; Bacteria; Virology; Drug resistance; Antibiotics; Pseudomonas aeruginosa; Pseudomonas; Gene; Escherichia coli; Genetics","score_opus":0.053140160457906885,"score_gpt":0.31877776058660484,"score_spread":0.26563760012869797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3167550255","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006831193,0.9966466,0.000020971209,0.00007146047,0.0008139561,0.00046886355,0.00031277575,0.000019460907,0.00096278405],"genre_scores_gemma":[0.0002802462,0.9976411,0.000033709337,0.00025968475,0.00016436244,0.00005468655,0.00006348247,0.000045928282,0.0014568327],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983552,0.00027669122,0.00053923496,0.0003294435,0.00021024123,0.0002892078],"domain_scores_gemma":[0.9986798,0.0001704775,0.00042935132,0.00064715766,0.000013213662,0.00006000605],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023439685,0.00030430607,0.0005852307,0.000023075858,0.0004804778,0.00010982762,0.0006771352,0.00010920462,0.001838809],"category_scores_gemma":[0.00003086695,0.00015555673,0.000513165,0.00023306158,0.0003003457,0.00009837203,0.0003491303,0.00031568544,0.00022785741],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000038025128,0.00005167638,0.0000010694164,0.00011213651,0.00010968857,0.000044475848,0.00003671686,0.000005355511,0.017686727,0.000029279438,0.0016708073,0.9802483],"study_design_scores_gemma":[0.000054475855,0.00002230094,0.000058125162,0.0005203043,0.00015930689,0.000037129565,0.000057413534,0.000003102718,0.000069589216,0.000005809348,0.9988468,0.00016563694],"about_ca_topic_score_codex":0.00014623645,"about_ca_topic_score_gemma":0.000035607085,"teacher_disagreement_score":0.997176,"about_ca_system_score_codex":0.000079058875,"about_ca_system_score_gemma":0.00006139253,"threshold_uncertainty_score":0.9990736},"labels":[],"label_agreement":null},{"id":"W3168302627","doi":"10.3390/v13061051","title":"Caprine Arthritis Encephalitis Virus Is Associated with Renal Lesions","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Virus; Myocarditis; Virology; Immunology; Kidney; Encephalitis; Classical swine fever; Arthritis; Pathology; Medicine; Internal medicine; Genetics","score_opus":0.03127656859534705,"score_gpt":0.27750160915257616,"score_spread":0.2462250405572291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3168302627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849697,0.009974593,0.000024415702,0.00043319396,0.000105198465,0.00011203808,0.0013664917,0.00009001242,0.0029243538],"genre_scores_gemma":[0.9876632,0.0018224326,0.000065298016,0.00076207786,0.000019569483,0.000043314198,0.00050183845,0.000015609725,0.009106629],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989865,0.00017620402,0.00014121797,0.00026339243,0.000058124646,0.00037454968],"domain_scores_gemma":[0.9994327,0.00014510457,0.000040395422,0.000231319,0.000104255836,0.000046233195],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000068280366,0.00012707253,0.00020414655,0.000049576145,0.0002306843,0.000023385095,0.00008811942,0.000108401706,0.008198689],"category_scores_gemma":[0.00013863876,0.00009946678,0.000053378237,0.00018624552,0.00017087384,0.000075049764,0.00006345984,0.00017851181,0.0028907848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014769836,0.0008319735,0.011306475,0.000005308352,0.0011299864,0.0018532205,0.00047583034,0.000001503497,0.90774953,0.00063763757,0.039170824,0.03669001],"study_design_scores_gemma":[0.0022577562,0.000321118,0.026884643,0.00010873437,0.000033497665,0.00019425628,0.00012259134,1.7328983e-7,0.7715458,0.00007641144,0.19828454,0.0001704397],"about_ca_topic_score_codex":0.0008036739,"about_ca_topic_score_gemma":0.002008001,"teacher_disagreement_score":0.1591137,"about_ca_system_score_codex":0.000041926607,"about_ca_system_score_gemma":0.00019491979,"threshold_uncertainty_score":0.9978856},"labels":[],"label_agreement":null},{"id":"W3168682353","doi":"10.3390/v13061082","title":"Development of Group B Coxsackievirus as an Oncolytic Virus: Opportunities and Challenges","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Vancouver Coastal Health Research Institute; British Columbia Lung Association","keywords":"Oncolytic virus; Virotherapy; Biology; Enterovirus; Virus; Coxsackievirus; Virology; Immunology; Cancer; Cancer research; Genetics","score_opus":0.14510148210006074,"score_gpt":0.3475720105294262,"score_spread":0.20247052842936547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3168682353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97440714,0.024102796,0.000017874843,0.00013538987,0.000048598788,0.00010833545,0.000025039564,0.00001537651,0.0011394566],"genre_scores_gemma":[0.9340505,0.062184066,0.0019803972,0.0010464095,0.00015628366,0.000050721716,0.000104010076,0.000056521483,0.000371063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987711,0.00014172021,0.00025289215,0.00036520715,0.00022684972,0.00024228255],"domain_scores_gemma":[0.9992347,0.00002304648,0.000070029644,0.00039913884,0.00012218677,0.00015091492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031372297,0.0001653979,0.00019869453,0.000060609425,0.00009406149,0.000027048816,0.00017144177,0.000118149575,0.00012607426],"category_scores_gemma":[0.00005621668,0.0001651419,0.000039298913,0.000061018243,0.00015172763,0.000011453047,0.00017280644,0.00006823904,0.000014798663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005252221,0.0001899107,0.00005947248,0.0000710261,0.00010222225,0.000022382326,0.00038024975,0.0000013648165,0.9187757,0.00048593583,0.000065286724,0.07932123],"study_design_scores_gemma":[0.00039082818,0.0010833519,0.0003115799,0.000024280936,0.000009734368,0.000016195114,0.0011628224,0.0000031396196,0.8182368,0.00007029052,0.17851795,0.00017302368],"about_ca_topic_score_codex":0.000020905516,"about_ca_topic_score_gemma":0.0012797447,"teacher_disagreement_score":0.17845267,"about_ca_system_score_codex":0.000014869728,"about_ca_system_score_gemma":0.00043378607,"threshold_uncertainty_score":0.67342913},"labels":[],"label_agreement":null},{"id":"W3169696692","doi":"10.3390/v13061055","title":"A Bioluminescent Biosensor for Quantifying the Interaction of SARS-CoV-2 and Its Receptor ACE2 in Cells and In Vitro","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Queen's University","funders":"","keywords":"Biosensor; Mutant; In vitro; Virus; Coronavirus; Virology; Receptor; Biology; High-throughput screening; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Chemistry; Angiotensin-converting enzyme 2; Drug discovery; Coronavirus disease 2019 (COVID-19); Computational biology; Biochemistry; Gene; Medicine; Infectious disease (medical specialty)","score_opus":0.16487302063784234,"score_gpt":0.4112879917215645,"score_spread":0.24641497108372215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169696692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974248,0.0015914999,0.000005582525,0.00041135808,0.00010893314,0.0003933775,0.000022166523,0.000008694578,0.000033595687],"genre_scores_gemma":[0.99301356,0.00011431017,0.000126717,0.006646576,0.000047597918,0.000031222677,0.0000016471369,0.00001300711,0.0000053861404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992194,0.00006291702,0.00021860315,0.00021385953,0.00011384522,0.00017134789],"domain_scores_gemma":[0.9994117,0.0003243336,0.000047929527,0.00012668502,0.00007802501,0.000011338973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023752105,0.00008993037,0.00021650048,0.00016390187,0.000027507518,0.000022143153,0.000042145482,0.000060359875,0.0000017377841],"category_scores_gemma":[0.0003628086,0.00006585316,0.000032938984,0.00027423937,0.0000526768,0.00007916897,0.000057167028,0.00012968243,0.0000047834087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095421297,0.00011814254,0.012085394,0.00025502287,0.000015509911,0.000011690736,0.00038736933,5.075712e-8,0.9838407,0.000013717072,0.000103074024,0.0022151202],"study_design_scores_gemma":[0.0011812252,0.00007580821,0.0012203963,0.00019893592,0.000011424287,0.000009726604,0.0006779943,0.0004347302,0.96228796,0.000006550024,0.033832766,0.000062504965],"about_ca_topic_score_codex":0.00022086587,"about_ca_topic_score_gemma":0.00032904407,"teacher_disagreement_score":0.03372969,"about_ca_system_score_codex":0.000038643375,"about_ca_system_score_gemma":0.00007357888,"threshold_uncertainty_score":0.2685414},"labels":[],"label_agreement":null},{"id":"W3172372217","doi":"10.3390/v13061120","title":"Discovery of Antivirals Using Phage Display","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Computational biology; Phage display; Virology; Drug discovery; Biology; Genetics; Bioinformatics","score_opus":0.2530933450568545,"score_gpt":0.48215086940136836,"score_spread":0.22905752434451387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172372217","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020002022,0.99577665,0.000019707919,0.000010540877,0.00016756014,0.0003580852,0.0004646676,0.000013178528,0.0011894185],"genre_scores_gemma":[0.00007429914,0.99521446,0.00024600184,0.00008915075,0.00038258315,0.000010005011,0.00015596296,0.00005005878,0.0037774926],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982037,0.00015391219,0.00056635385,0.00033702367,0.00044271402,0.0002963008],"domain_scores_gemma":[0.9989362,0.00031235316,0.00022408029,0.0003778368,0.00006942718,0.00008013857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016507716,0.00031511122,0.0022026368,0.0002026739,0.000050994237,0.000035735433,0.00016089782,0.00018294256,0.00019624848],"category_scores_gemma":[0.00012365582,0.00020455018,0.0007529099,0.0003827769,0.00016706443,0.0001357198,0.00021480052,0.00034825166,0.0000638111],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006480762,0.0004418127,0.00041437976,0.08111231,0.0013434822,0.0010193246,0.000033276538,2.2665319e-7,0.0022224085,0.0015600988,0.0018635915,0.90992427],"study_design_scores_gemma":[0.000125169,0.00006973543,0.00001761103,0.029543007,0.0008366955,0.00017276265,0.000008285016,0.0000031356722,0.000933446,0.0000052403784,0.9680961,0.00018883693],"about_ca_topic_score_codex":0.00021067496,"about_ca_topic_score_gemma":0.0000034589984,"teacher_disagreement_score":0.9662325,"about_ca_system_score_codex":0.000044220495,"about_ca_system_score_gemma":0.00059667067,"threshold_uncertainty_score":0.8341314},"labels":[],"label_agreement":null},{"id":"W3172460540","doi":"10.3390/v13061084","title":"Examination of the APOBEC3 Barrier to Cross Species Transmission of Primate Lentiviruses","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Cytidine deaminase; APOBEC3G; Biology; Simian immunodeficiency virus; Virology; Restriction enzyme; Cytidine; Virus; Viral replication; DNA; Mutagenesis; Somatic hypermutation; Genetics; Mutation; Enzyme; Antibody; Gene; B cell; Biochemistry","score_opus":0.08258925611856943,"score_gpt":0.3750619589466153,"score_spread":0.2924727028280459,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172460540","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023418195,0.99475956,0.000022115559,0.0000073606266,0.00022799449,0.0006254015,0.001065201,0.000013424317,0.00093710143],"genre_scores_gemma":[0.0014078981,0.9938145,0.000031222316,0.000016506985,0.000015494115,0.00006577133,0.0001449396,0.000024034038,0.0044796034],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982442,0.00063903106,0.0004990538,0.00027524863,0.00009733439,0.0002451293],"domain_scores_gemma":[0.9988897,0.00028700955,0.00023748378,0.00044266717,0.00011696919,0.000026196594],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025182194,0.0002409473,0.000984591,0.00014861624,0.00011350505,0.000015112341,0.00035928705,0.0002493199,0.001324066],"category_scores_gemma":[0.00015761143,0.00013745528,0.00043076684,0.0003004014,0.00026994498,0.000054757133,0.00016009949,0.00020014471,0.00027572582],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021853806,0.00024317167,0.00012504608,0.0043392424,0.00059300044,0.0000040740965,0.00028915465,4.632598e-7,0.012716519,0.0002172959,0.001024074,0.98042613],"study_design_scores_gemma":[0.00019824275,0.0000764175,0.00059700856,0.004249264,0.00021329054,0.000007009408,0.000022274442,6.9834183e-9,0.11131545,0.0000021050553,0.8832161,0.00010284311],"about_ca_topic_score_codex":0.000050748746,"about_ca_topic_score_gemma":0.000012473088,"teacher_disagreement_score":0.98032326,"about_ca_system_score_codex":0.000051419527,"about_ca_system_score_gemma":0.00029122137,"threshold_uncertainty_score":0.99958885},"labels":[],"label_agreement":null},{"id":"W3173178472","doi":"10.3390/v13071266","title":"Cytomegalovirus as an Uninvited Guest in the Response to Vaccines in People Living with HIV","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Canadian Institutes of Health Research","funders":"Canadian Institutes of Health Research; Hôpitaux Universitaires de Genève; McGill University; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Immunosenescence; Immune system; Immunology; Cytomegalovirus; Medicine; Population; Immunity; Virology; Virus; Viral disease; Herpesviridae","score_opus":0.0724042587365496,"score_gpt":0.39598673149224584,"score_spread":0.32358247275569624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173178472","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06902951,0.9267428,0.0000019373035,0.00071690034,0.00011102438,0.0024387771,0.00010161961,0.00008389645,0.00077355414],"genre_scores_gemma":[0.0029136108,0.99188435,0.00011345484,0.0025118028,0.0005352372,0.0006757026,0.000106159765,0.00020310446,0.0010565914],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99408066,0.0020822857,0.00096478575,0.0010390183,0.0009295238,0.0009037291],"domain_scores_gemma":[0.99510777,0.0025764965,0.0001898926,0.0015713995,0.00016797925,0.0003864365],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027138453,0.0007327483,0.002615147,0.002077556,0.0001331431,0.000282587,0.0007948918,0.00042678247,0.0005442258],"category_scores_gemma":[0.0018594444,0.0004537394,0.00027876682,0.0050022732,0.00007303072,0.00027161316,0.00029795754,0.0014846267,0.0007330225],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011474072,0.0073714647,0.05725497,0.030726247,0.00117855,0.020725224,0.020857245,0.000028738768,0.0005169036,0.0006801342,0.020040339,0.8291461],"study_design_scores_gemma":[0.00084522023,0.0007215254,0.0073191863,0.023322167,0.00022991966,0.0005042515,0.00084029534,0.0000032272524,0.000012534246,0.0000020499488,0.9656656,0.0005340598],"about_ca_topic_score_codex":0.0037053898,"about_ca_topic_score_gemma":0.014312987,"teacher_disagreement_score":0.94562525,"about_ca_system_score_codex":0.00048531184,"about_ca_system_score_gemma":0.0020499702,"threshold_uncertainty_score":0.99979144},"labels":[],"label_agreement":null},{"id":"W3175716618","doi":"10.3390/v13071189","title":"Prevention of CD8 T Cell Deletion during Chronic Viral Infection","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"CD8; Chronic infection; Viral replication; Cytotoxic T cell; Biology; Virus; Virology; Immune system; T cell; Immunology; Viral load; Genetics; In vitro","score_opus":0.014536038023129558,"score_gpt":0.25085267080545176,"score_spread":0.2363166327823222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175716618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99292564,0.0020336274,0.0005268455,0.000015265414,0.0023972043,0.00006703922,0.0000015747614,0.000054995013,0.0019778246],"genre_scores_gemma":[0.98785913,0.0004259635,0.000013200747,0.00004214694,0.000048803468,0.000008446111,0.00007598884,0.000008602778,0.0115177175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993918,0.0001227149,0.00020852796,0.00013949585,0.000021184129,0.00011630358],"domain_scores_gemma":[0.99964875,0.000018508055,0.000118030286,0.00013152226,0.0000775562,0.000005630994],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000057461348,0.000076387274,0.00011014894,0.00007669393,0.00009588058,0.000007786749,0.000029003368,0.00011651993,0.0028867556],"category_scores_gemma":[0.000026703203,0.000078996076,0.00008456952,0.00009377134,0.000031018062,0.00020012261,0.0000281757,0.00013508703,0.00061714806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007790078,0.00013314761,0.0015569198,0.00004529324,0.000035373905,7.387742e-7,0.000040941293,0.000034834848,0.9954018,0.0000968428,0.00091259414,0.00166364],"study_design_scores_gemma":[0.00065288675,0.00014895866,0.011996979,0.00003673712,0.000025675035,0.000026993097,0.000034931974,0.000003912684,0.9336402,0.000023261236,0.05333902,0.00007048049],"about_ca_topic_score_codex":0.00010515871,"about_ca_topic_score_gemma":0.000036836907,"teacher_disagreement_score":0.06176161,"about_ca_system_score_codex":0.000071348295,"about_ca_system_score_gemma":0.000049293656,"threshold_uncertainty_score":0.99802476},"labels":[],"label_agreement":null},{"id":"W3177602577","doi":"10.3390/v13071318","title":"Screening for Hepatocellular Carcinoma in Patients with Hepatitis B","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; London Health Sciences Centre; Western University","funders":"National Cancer Institute","keywords":"Hepatocellular carcinoma; Medicine; Internal medicine; Risk stratification; Hepatitis B; Chronic hepatitis; Carcinoma; Risk factor; Oncology; Hepatitis B virus; Gastroenterology; Immunology; Virus","score_opus":0.09577444685679126,"score_gpt":0.3333837499012629,"score_spread":0.23760930304447164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3177602577","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0058839647,0.9904047,0.00009581896,0.000009425262,0.00014757924,0.0027762246,0.00046465488,0.00006143593,0.00015618015],"genre_scores_gemma":[0.0009959359,0.9944903,0.0022007835,0.0002774047,0.00019888477,0.0008405293,0.000692188,0.00017673719,0.00012720095],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99757916,0.000115177005,0.0007335981,0.00065386086,0.00041342815,0.0005047645],"domain_scores_gemma":[0.9985643,0.00027245402,0.00027863492,0.00053167576,0.00021883665,0.00013410552],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015579944,0.00056315144,0.0028457583,0.00035850544,0.000099939425,0.00003441786,0.00014265969,0.00026729272,0.00008648213],"category_scores_gemma":[0.0003068154,0.0004329815,0.0003811016,0.00051271886,0.00008117565,0.000097887816,0.00012575644,0.0003507634,0.00003287758],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026893516,0.00012796516,0.6403257,0.008413883,0.0002665195,0.00013007999,0.000035138266,9.548649e-8,3.98714e-8,0.000027308773,0.0006553584,0.34999102],"study_design_scores_gemma":[0.001355251,0.000534646,0.022550454,0.029254492,0.0011891817,0.000008565316,0.0000049024966,0.000007820663,0.0000043017085,0.000001721717,0.94463074,0.00045794138],"about_ca_topic_score_codex":0.0021164156,"about_ca_topic_score_gemma":0.0009217791,"teacher_disagreement_score":0.9439754,"about_ca_system_score_codex":0.00022356462,"about_ca_system_score_gemma":0.0004138136,"threshold_uncertainty_score":0.9998122},"labels":[],"label_agreement":null},{"id":"W3178090208","doi":"10.3390/v13071331","title":"Advances in Phage Therapy: Targeting the Burkholderia cepacia Complex","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phage therapy; Burkholderia cepacia complex; Burkholderia; Drug resistance; Intensive care medicine; Medicine; Cystic fibrosis; Antimicrobial; Immunology; Biology; Microbiology; Bacteriophage; Bacteria; Internal medicine","score_opus":0.08726195612869493,"score_gpt":0.36731736834891,"score_spread":0.28005541222021507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3178090208","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011999211,0.9945032,0.000007171926,0.000024168165,0.0003612772,0.00034056325,0.000054139004,0.00002688816,0.0045626187],"genre_scores_gemma":[0.00012422349,0.99881107,0.00013452195,0.00039652918,0.00012578558,0.00006649541,0.000051335293,0.00003407343,0.0002559446],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986933,0.00021069474,0.00037500987,0.00035045575,0.00010403666,0.0002664862],"domain_scores_gemma":[0.9993304,0.00014201335,0.00020013576,0.0002870926,0.000003972782,0.000036357873],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014880669,0.00027310415,0.00060905423,0.000032242493,0.00015885055,0.00010252734,0.0003723603,0.0000955584,0.011774212],"category_scores_gemma":[0.000027292095,0.00017033603,0.0002307864,0.00033417443,0.00012857707,0.00030312792,0.00021537468,0.00031492213,0.00072271924],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000013055784,0.000054093303,0.000008895105,0.00015942857,0.0000147412975,0.00001467211,0.00009262167,0.0000039637353,0.0040501636,0.000012182465,0.0037558726,0.9918321],"study_design_scores_gemma":[0.00005314406,0.000009694104,0.000056209738,0.0008429547,0.000026172105,0.000015171447,0.000047907284,9.3066745e-7,0.00008825328,0.0000054697616,0.9986619,0.00019223124],"about_ca_topic_score_codex":0.00036155916,"about_ca_topic_score_gemma":0.00030687006,"teacher_disagreement_score":0.994906,"about_ca_system_score_codex":0.00011521511,"about_ca_system_score_gemma":0.000021069916,"threshold_uncertainty_score":0.9891292},"labels":[],"label_agreement":null},{"id":"W3180032874","doi":"10.3390/v13071380","title":"Detection and Genetic Characterization of Hepatitis B and D Viruses: A Multi-Site Cross-Sectional Study of People Who Use Illicit Drugs in the Amazon Region","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Virology; Genotype; HBsAg; Hepatitis B virus; Hepatitis B; Biology; Serology; Transmission (telecommunications); Polymerase chain reaction; Hepatitis D; Molecular epidemiology; Virus; Immunology; Genetics; Gene; Antibody","score_opus":0.04528924448737354,"score_gpt":0.302303599214564,"score_spread":0.2570143547271905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3180032874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998945,0.00020631518,0.000159557,0.000020676549,0.00006951471,0.00053495384,0.00004307238,0.000015977084,0.0000049362834],"genre_scores_gemma":[0.99771196,0.0018228414,0.000077508266,0.00024245698,0.00004341821,0.000053678243,0.0000075014395,0.000017330263,0.000023299825],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99872625,0.00017407071,0.0004343836,0.000273332,0.0002675965,0.00012437302],"domain_scores_gemma":[0.9991815,0.00017400106,0.00017912609,0.00021717238,0.00021576662,0.000032442313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013886453,0.00013159172,0.00033167613,0.00015255126,0.0001014681,0.000043719978,0.000036551308,0.0000693645,0.000008212303],"category_scores_gemma":[0.00030960355,0.00010903593,0.000030676943,0.00036848302,0.00010055347,0.00021209716,0.00006882003,0.00010861025,0.0000013306502],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009884477,0.00032298284,0.8509838,0.00009510789,0.000043901313,0.00001687541,0.012370759,0.0000027399274,0.13533902,0.0000033969934,0.0000014998092,0.00072106894],"study_design_scores_gemma":[0.0014591645,0.00041037664,0.98211074,0.000091593654,0.000058562982,0.00004861798,0.00057793513,0.0002895235,0.014786713,0.000003667388,0.000075375036,0.000087751854],"about_ca_topic_score_codex":0.01715998,"about_ca_topic_score_gemma":0.031461205,"teacher_disagreement_score":0.13112691,"about_ca_system_score_codex":0.00003455741,"about_ca_system_score_gemma":0.000033144865,"threshold_uncertainty_score":0.98938483},"labels":[],"label_agreement":null},{"id":"W3181539733","doi":"10.3390/v13071352","title":"Human Coronaviruses Do Not Transfer Efficiently between Surfaces in the Absence of Organic Materials","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Infection Control and Ventilation","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Health Canada","funders":"Health Canada","keywords":"Norovirus; Coronavirus; Contamination; Transmission (telecommunications); Feces; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Murine norovirus; Microbiology; Virology; Biology; Materials science; Chemistry; Ecology; Virus; Medicine; Computer science","score_opus":0.05283230251746372,"score_gpt":0.32218498766324183,"score_spread":0.2693526851457781,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181539733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990445,0.00013412672,0.00012009582,0.00011648937,0.000115123556,0.00016913202,0.000034650187,0.000016365411,0.000249546],"genre_scores_gemma":[0.99929285,0.000020322866,0.000010169097,0.0004907223,0.00009791298,0.000005732099,0.00001185924,0.0000091619395,0.00006125389],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991725,0.000104565996,0.00028208198,0.00013284602,0.00019648571,0.000111492904],"domain_scores_gemma":[0.9995913,0.00010521236,0.000038838338,0.00016864264,0.00007741046,0.000018590083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002979412,0.00007971632,0.00022231776,0.000052194355,0.000055661643,0.000025150266,0.000058743623,0.000052203177,0.00087740715],"category_scores_gemma":[0.00005718839,0.000055277887,0.00004250905,0.00020523657,0.0000475967,0.000050503742,0.0000103835055,0.000069078895,0.00003478172],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034120825,0.00009878706,0.17650583,0.000043262015,0.000020020178,0.000008745034,0.0003800134,0.00001021286,0.8223055,0.0003694745,0.00002575496,0.0001982969],"study_design_scores_gemma":[0.00051063736,0.0000639216,0.51984406,0.000054100787,0.00003276881,0.000004731847,0.00010564076,0.0000014024639,0.47853762,0.000018856175,0.00078568066,0.000040610666],"about_ca_topic_score_codex":0.0001283528,"about_ca_topic_score_gemma":0.000114217764,"teacher_disagreement_score":0.34376785,"about_ca_system_score_codex":0.000013980663,"about_ca_system_score_gemma":0.000045987443,"threshold_uncertainty_score":0.96069926},"labels":[],"label_agreement":null},{"id":"W3181855792","doi":"10.3390/v13071314","title":"Global Utilization Trends of Direct Acting Antivirals (DAAs) during the COVID-19 Pandemic: A Time Series Analysis","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University Health Network; Toronto General Hospital; St. Michael's Hospital; University of Toronto; Women's College Hospital","funders":"U.S. Department of Veterans Affairs","keywords":"Pandemic; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Series (stratigraphy); Biology; Medicine; Internal medicine; Infectious disease (medical specialty); Outbreak","score_opus":0.14232398560367895,"score_gpt":0.4207523256031719,"score_spread":0.2784283399994929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181855792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808167,0.0007365313,0.00020231804,0.00066704163,0.000032368964,0.00011295397,0.00020093155,0.00012324218,0.017107865],"genre_scores_gemma":[0.99649155,0.00060496514,0.00010609898,0.00059136434,0.00006578573,0.00001104643,0.00004780804,0.000014125103,0.0020672316],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983838,0.00030263132,0.00031057413,0.00027548536,0.000470262,0.0002572223],"domain_scores_gemma":[0.9989641,0.00023275717,0.000115989256,0.0004110943,0.0001466831,0.00012941724],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00041659185,0.00012615853,0.00041191984,0.00022146446,0.00016481192,0.000041416366,0.00011370005,0.00007612015,0.001386866],"category_scores_gemma":[0.0020483898,0.000093164796,0.00017742114,0.002921101,0.00012937713,0.00018351205,0.000120581746,0.00010249937,0.000029383385],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014482504,0.000062069244,0.9583393,0.00009078315,0.0006893527,0.00007644757,0.0002686057,0.000108580374,0.027941663,0.000026658805,0.0004309698,0.011820792],"study_design_scores_gemma":[0.0018302548,0.00017780812,0.74363244,0.00011473535,0.0016519912,0.00008240412,0.0005835532,0.0014650667,0.10716145,0.000053078104,0.14286985,0.00037736827],"about_ca_topic_score_codex":0.0007027552,"about_ca_topic_score_gemma":0.0015564865,"teacher_disagreement_score":0.2147068,"about_ca_system_score_codex":0.00018508086,"about_ca_system_score_gemma":0.00028031223,"threshold_uncertainty_score":0.999526},"labels":[],"label_agreement":null},{"id":"W3185847732","doi":"10.3390/v13071404","title":"Establishment of a Three-Dimensional In Vitro Model of Equine Papillomavirus Type 2 Infection","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Veterinärmedizinische Universität Wien; Universität Zürich","keywords":"Biology; Carcinogenesis; Pathology; Hyperplasia; Immunohistochemistry; Dysplasia; Oncogene; Cancer research; Cell; Immunology; Cancer; Medicine; Cell cycle","score_opus":0.09826495787986118,"score_gpt":0.3616461132293524,"score_spread":0.26338115534949125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3185847732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995652,0.0011617346,0.00007452053,0.000116454416,0.000056140572,0.00011313168,0.000022877013,0.000009947576,0.002793187],"genre_scores_gemma":[0.99894404,0.00016407591,0.00045437863,0.00027264125,0.00003501151,0.0000066495345,0.000016727907,0.000008666138,0.000097816584],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991827,0.00001950604,0.0002167239,0.00013196025,0.00032104852,0.0001280777],"domain_scores_gemma":[0.9994064,0.00005166951,0.000036371202,0.00016775278,0.0002818948,0.000055890043],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012542492,0.000060750914,0.00023097901,0.000106500986,0.000010804875,0.0000032382272,0.000028777074,0.00004845667,0.0010902634],"category_scores_gemma":[0.00014860187,0.0000517969,0.00004768063,0.00037126822,0.000047530997,0.000053637657,0.00007233806,0.00011440176,0.000007833807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00185771,0.000527681,0.025232334,0.00023593505,0.00003766798,0.000018723382,0.000042454125,0.0009757855,0.9534111,0.00025618484,0.00024707871,0.017157342],"study_design_scores_gemma":[0.0018105402,0.0004936885,0.052191563,0.00005900152,0.00003504849,0.000005363967,0.000009126408,0.009250418,0.9346752,0.00076752476,0.00063216354,0.00007036798],"about_ca_topic_score_codex":0.0012634039,"about_ca_topic_score_gemma":0.00072159193,"teacher_disagreement_score":0.026959227,"about_ca_system_score_codex":0.000053164254,"about_ca_system_score_gemma":0.00030054676,"threshold_uncertainty_score":0.99982285},"labels":[],"label_agreement":null},{"id":"W3186971674","doi":"10.3390/v13081420","title":"Virotherapy in Germany—Recent Activities in Virus Engineering, Preclinical Development, and Clinical Studies","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"Wilhelm Sander-Stiftung; European Commission; Deutsche Krebshilfe; Else Kröner-Fresenius-Stiftung; Berlin University Alliance; Deutsche Forschungsgemeinschaft","keywords":"Oncolytic virus; Virotherapy; Vesicular stomatitis virus; Vaccinia; Virology; Viral vector; Biology; Virus; Viral replication; Gene","score_opus":0.19243599185003785,"score_gpt":0.4822367651241777,"score_spread":0.28980077327413983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3186971674","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0676397,0.9315447,0.0000030446815,0.00001021631,0.00020329651,0.0005341828,0.000031110012,0.000014179182,0.000019561787],"genre_scores_gemma":[0.000059429476,0.9986946,0.0002373192,0.00020594672,0.00027050523,0.00026582935,0.00006855052,0.000089861176,0.00010794608],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967889,0.00062365027,0.0010932313,0.0008246514,0.00021466217,0.00045489194],"domain_scores_gemma":[0.99885553,0.00035275274,0.00017804114,0.00046372745,0.000041773445,0.000108197804],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011664379,0.0004804127,0.0016259552,0.000250966,0.00003770059,0.000041937434,0.0003068809,0.00057204993,0.000040056133],"category_scores_gemma":[0.00040159124,0.00042924532,0.00019573965,0.000281263,0.00016810723,0.0000079614,0.0003404095,0.0006198848,0.000013448759],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002282056,0.00032346288,0.00038903064,0.0013216283,0.00069690216,0.000054062562,0.0000706165,0.0000037274956,0.00066422025,0.000005375686,0.0002539615,0.9959888],"study_design_scores_gemma":[0.00057919254,0.00047967525,0.00010706156,0.0020109948,0.000037662783,0.000009145053,0.000026490885,0.0000014957438,0.0026124523,0.0000015610639,0.99368495,0.0004493262],"about_ca_topic_score_codex":0.000011827102,"about_ca_topic_score_gemma":0.0011403755,"teacher_disagreement_score":0.9955395,"about_ca_system_score_codex":0.00009758914,"about_ca_system_score_gemma":0.0007279401,"threshold_uncertainty_score":0.99981594},"labels":[],"label_agreement":null},{"id":"W3187732068","doi":"10.3390/v13081580","title":"SHARED: An International Collaboration to Unravel Hepatitis C Resistance","year":2021,"lang":"en","type":"editorial","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"British Columbia Centre for Disease Control","keywords":"Virology; Resistance (ecology); Hepatitis C; Hepatitis; Hepatitis virus; Medicine; Computational biology; Biology; Ecology","score_opus":0.038044319700591835,"score_gpt":0.3941998725266499,"score_spread":0.35615555282605804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3187732068","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033414473,0.00062638836,0.00012696067,0.0014862509,0.95938486,0.0010334816,0.009629242,0.00021581851,0.024155555],"genre_scores_gemma":[0.00090971304,0.002420832,0.0038366574,0.0012737947,0.96760803,0.00027549197,0.0075355126,0.00015720111,0.015982773],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99576414,0.00016760558,0.00050428696,0.00082668074,0.0023671328,0.0003701832],"domain_scores_gemma":[0.9958871,0.00033274735,0.0001387766,0.00085136044,0.0023614122,0.00042862634],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034625395,0.00031974682,0.00055355945,0.00044003016,0.0001123806,0.00040104546,0.00045699236,0.00065505615,0.0020397522],"category_scores_gemma":[0.007114553,0.00034305576,0.000086378655,0.0006871902,0.00005952313,0.00048530588,0.00019261784,0.00073297316,0.0006497321],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003140871,0.00013328056,0.0021770624,0.00013320307,0.0001324393,0.000388117,0.00020656026,0.0000018407286,0.0015291412,0.00011090853,0.99255896,0.002314383],"study_design_scores_gemma":[0.0006545285,0.00023249249,0.0012181975,0.0006688335,0.000045872737,9.2726725e-7,0.000042868433,0.000017383314,0.0017469339,0.000021254114,0.99504596,0.0003047706],"about_ca_topic_score_codex":0.001664154,"about_ca_topic_score_gemma":0.016558798,"teacher_disagreement_score":0.014894645,"about_ca_system_score_codex":0.0007820941,"about_ca_system_score_gemma":0.0025528495,"threshold_uncertainty_score":0.9999021},"labels":[],"label_agreement":null},{"id":"W3191151033","doi":"10.3390/v13081515","title":"Challenging the Existing Model of the Hexameric HIV-1 Gag Lattice and MA Shell Superstructure: Implications for Viral Entry","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Northern Alberta Institute of Technology; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glycoprotein; Viral entry; Viral envelope; Membrane glycoproteins; Lipid bilayer fusion; Herpesvirus glycoprotein B; Human immunodeficiency virus (HIV); Virology; Cell biology; Biology; Physics; Biophysics; Viral replication; Virus; Genetics","score_opus":0.06674116345369686,"score_gpt":0.3052193827020751,"score_spread":0.23847821924837825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3191151033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98566103,0.008842356,0.00073341693,0.0026652182,0.00008521188,0.00029213817,0.0005874384,0.00001979352,0.0011133869],"genre_scores_gemma":[0.9984032,0.0003179705,0.00024676917,0.00023000511,0.000013222679,0.00003954765,0.000030474303,0.0000073245455,0.0007115069],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995084,0.00007203341,0.00008966342,0.00013426645,0.000017456576,0.00017822464],"domain_scores_gemma":[0.99943644,0.0002722395,0.000033960583,0.00020971264,0.000036512858,0.000011128161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006252232,0.000069621536,0.00009291099,0.000014857243,0.00031617042,0.000010335468,0.000111865025,0.000045753175,0.00003691305],"category_scores_gemma":[0.0000823591,0.000039465936,0.00004759063,0.000053008927,0.00016479545,0.000031996067,0.00008830108,0.00010054819,0.000013935334],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006822179,0.00010804238,0.015482263,0.00006278709,0.0003495971,9.683915e-7,0.0016190232,0.00018816597,0.9520107,0.017575683,0.0016486194,0.010885924],"study_design_scores_gemma":[0.003330899,0.00016682186,0.071435906,0.000092763425,0.00032421606,0.00015895738,0.003725441,0.00065707706,0.86054575,0.0077713733,0.05142335,0.00036745597],"about_ca_topic_score_codex":0.000027884193,"about_ca_topic_score_gemma":0.000016060769,"teacher_disagreement_score":0.09146497,"about_ca_system_score_codex":0.000012216324,"about_ca_system_score_gemma":0.0000523302,"threshold_uncertainty_score":0.24317592},"labels":[],"label_agreement":null},{"id":"W3192946872","doi":"10.3390/v13081527","title":"Detection and Molecular Characterization of Two Gammaherpesviruses from Pantesco Breed Donkeys during an Outbreak of Mild Respiratory Disease","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Donkey; Breed; Biology; Outbreak; Endangered species; Veterinary medicine; Polymerase chain reaction; Tongue; Phylogenetic tree; Zoology; Virology; Pathology; Genetics; Gene; Medicine; Ecology","score_opus":0.027397035653010597,"score_gpt":0.292298463254257,"score_spread":0.2649014276012464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192946872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99861723,0.00052356056,0.0002756463,0.000015651412,0.000088729685,0.00017843404,0.00020118724,0.000045781377,0.000053767857],"genre_scores_gemma":[0.99928623,0.00013183017,0.00014775338,0.00026156296,0.00006790502,0.000017906925,0.00004398067,0.000027748873,0.000015053714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902856,0.00009928611,0.00030828294,0.00027132884,0.00016972552,0.00012278631],"domain_scores_gemma":[0.99920535,0.000029191453,0.00014110791,0.00033836064,0.00013662121,0.00014934149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004909721,0.00014175267,0.00027395872,0.000121596655,0.00006223725,0.000014378287,0.000030476005,0.00005894977,0.000097881115],"category_scores_gemma":[0.00007079002,0.00013485888,0.000068247544,0.00020357683,0.00007381229,0.00020308747,0.000036436373,0.00007202051,0.0000054645734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023887401,0.0003546832,0.16420582,0.000073525116,0.00012716232,0.00006560938,0.00007264868,0.000002760366,0.8251962,0.000019633457,3.209151e-7,0.009642769],"study_design_scores_gemma":[0.0011740602,0.000074657175,0.39756107,0.00011815526,0.00017614182,0.000002972405,0.000020066278,0.000026740765,0.6003054,0.000029842053,0.0004438509,0.00006705841],"about_ca_topic_score_codex":0.00070755713,"about_ca_topic_score_gemma":0.00013087691,"teacher_disagreement_score":0.23335527,"about_ca_system_score_codex":0.000030318948,"about_ca_system_score_gemma":0.000081836886,"threshold_uncertainty_score":0.54993856},"labels":[],"label_agreement":null},{"id":"W3193501897","doi":"10.3390/v13081667","title":"Peptide Platform as a Powerful Tool in the Fight against COVID-19","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Leibniz-Gemeinschaft; Fondazione Roma; Deutsches Primatenzentrum; Ministero dell’Istruzione, dell’Università e della Ricerca","keywords":"Dipeptidyl peptidase-4; Virology; Antibody; Viral entry; Coronavirus; Neutralizing antibody; Middle East respiratory syndrome coronavirus; Glycoprotein; Biology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Neutralization; Pandemic; Computational biology; Coronavirus disease 2019 (COVID-19); Virus; Medicine; Immunology; Infectious disease (medical specialty); Viral replication; Molecular biology; Disease","score_opus":0.08346006293158875,"score_gpt":0.38680173906550125,"score_spread":0.3033416761339125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193501897","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9553207,0.0010240827,0.000019009942,0.0029664089,0.00009280222,0.0004220198,0.000017383069,0.0000656426,0.040071923],"genre_scores_gemma":[0.3141663,0.000032573917,0.00004567602,0.68525785,0.0001675986,0.000063394655,0.000006914701,0.000019816931,0.00023984806],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983951,0.00007698917,0.0002511434,0.00031237616,0.00058044516,0.00038394457],"domain_scores_gemma":[0.9987174,0.00055494375,0.000037086535,0.00056385656,0.00007527249,0.000051415085],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045167533,0.00015407983,0.00023718788,0.0001550504,0.000094604635,0.00007940971,0.00024400276,0.000104536244,0.00026229033],"category_scores_gemma":[0.002165415,0.000103586666,0.00010855564,0.000607576,0.000085616164,0.00013728492,0.00010439692,0.0003743966,0.001107704],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002218923,0.0019297403,0.32638976,0.0007968295,0.00031390926,0.023039581,0.010446076,0.000007934377,0.38399434,0.010079368,0.22424601,0.016537517],"study_design_scores_gemma":[0.0013719508,0.00012171633,0.0022369777,0.000057610665,0.000016082586,0.00013737229,0.0011958438,0.000025053308,0.07548088,0.0006453311,0.91858405,0.00012714916],"about_ca_topic_score_codex":0.0004622487,"about_ca_topic_score_gemma":0.0004785174,"teacher_disagreement_score":0.694338,"about_ca_system_score_codex":0.00017496078,"about_ca_system_score_gemma":0.0013659023,"threshold_uncertainty_score":0.99967},"labels":[],"label_agreement":null},{"id":"W3194009654","doi":"10.3390/v13091697","title":"Application of Plant Viruses in Biotechnology, Medicine, and Human Health","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Tobacco mosaic virus; Potato virus X; Capsid; Biotechnology; Plant virus; Cowpea mosaic virus; Virology; Biology; Virus; Cucumber mosaic virus; Computational biology; Nanotechnology","score_opus":0.07625296494573583,"score_gpt":0.390459252813377,"score_spread":0.31420628786764115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3194009654","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00037743343,0.99817353,0.00026917123,0.00007077411,0.00001910945,0.00038142595,0.0006554579,0.000011377309,0.000041734296],"genre_scores_gemma":[0.0006872752,0.99792546,0.00012101637,0.00021606879,0.00006258448,0.00011239317,0.000848616,0.00001957057,0.0000069874163],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989384,0.000053515625,0.0004492199,0.00036264266,0.000058826103,0.00013741356],"domain_scores_gemma":[0.9993219,0.000024551999,0.0002378747,0.00036287794,0.000012252133,0.00004053794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012578668,0.00018035487,0.0007056322,0.00012263456,0.00003982673,0.0000039724628,0.00017547264,0.00029774517,0.000005086926],"category_scores_gemma":[0.000017130527,0.0001462288,0.000062564584,0.00016805161,0.00015930574,0.0000013725961,0.00006112319,0.00012581334,0.0000017206272],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000057546545,0.00019093092,0.00020536003,0.0057013165,0.0001747548,0.0000028430493,0.000033708253,6.1371765e-7,0.026952662,0.012743149,0.004155147,0.94983375],"study_design_scores_gemma":[0.00011513875,0.000069395035,0.00003326348,0.0014122804,0.000046073546,0.000019064382,0.000016920432,2.0901203e-7,0.0013652088,0.00001963849,0.9967801,0.0001226899],"about_ca_topic_score_codex":0.00048640886,"about_ca_topic_score_gemma":0.00057493977,"teacher_disagreement_score":0.992625,"about_ca_system_score_codex":0.000010230075,"about_ca_system_score_gemma":0.000118099,"threshold_uncertainty_score":0.59630376},"labels":[],"label_agreement":null},{"id":"W3195210380","doi":"10.3390/v13081613","title":"Special Issue “APOBECs and Virus Restriction”","year":2021,"lang":"en","type":"editorial","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"APOBEC; Biology; Enzyme; Virus; Genetics; Immunity; Virology; Restriction enzyme; Apolipoprotein B; Computational biology; Genome; Biochemistry; Gene; Immune system","score_opus":0.012943742075359909,"score_gpt":0.27266147736012636,"score_spread":0.25971773528476644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195210380","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013132328,0.016173525,0.0000019965219,0.00006535926,0.97167027,0.00013081843,0.00065962446,0.00009434278,0.009890838],"genre_scores_gemma":[0.000037620874,0.013975654,0.000012508932,0.00022920569,0.929739,0.000019823898,0.0006414452,0.000053540538,0.055291224],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982707,0.0003723149,0.0003858099,0.00050522556,0.000086754975,0.000379224],"domain_scores_gemma":[0.9984018,0.0008384432,0.0001672081,0.00040351468,0.00016249648,0.00002652718],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016235119,0.00037093984,0.0005713764,0.00021385256,0.0002505777,0.00009017223,0.00025447935,0.0015523596,0.0077682263],"category_scores_gemma":[0.0011963401,0.0003467504,0.00012379872,0.00012677627,0.00026696292,0.00010833921,0.00024572804,0.0010910291,0.002715069],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050008716,0.00007191321,0.000005826293,0.000032581276,0.00023143177,0.000029972343,0.000100681544,6.01963e-8,0.044142723,0.00007557598,0.95186853,0.0029406338],"study_design_scores_gemma":[0.0006383252,0.00022468505,0.000038124206,0.0001099618,0.00009255467,0.000016920849,0.00010169118,2.110952e-8,0.05828781,0.000013596793,0.9401457,0.00033061643],"about_ca_topic_score_codex":0.00074387575,"about_ca_topic_score_gemma":0.00015877582,"teacher_disagreement_score":0.04540039,"about_ca_system_score_codex":0.00006903349,"about_ca_system_score_gemma":0.00036038537,"threshold_uncertainty_score":0.99989843},"labels":[],"label_agreement":null},{"id":"W3195614140","doi":"10.3390/v13081643","title":"The Role of Phylogenetics in Unravelling Patterns of HIV Transmission towards Epidemic Control: The Quebec Experience (2002–2020)","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre; Centre Hospitalier de l’Université de Montréal; McGill University; Jewish General Hospital","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; Fonds de recherche du Québec – Nature et technologies; Université de Montréal; McGill University Health Centre; McGill University; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Viral phylodynamics; Transmission (telecommunications); Demographics; Phylogenetics; Cluster (spacecraft); Men who have sex with men; Human immunodeficiency virus (HIV); Evolutionary biology; Demography; Phylogenetic tree; Biology; Virology; Genetics; Gene; Computer science; Sociology","score_opus":0.017775361836553677,"score_gpt":0.2770287735569529,"score_spread":0.2592534117203992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195614140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9572749,0.041035842,0.00081852794,0.0003569191,0.00006470771,0.00016148208,0.00012374006,0.0000061812007,0.00015771281],"genre_scores_gemma":[0.99564373,0.0038377745,0.00002345228,0.00006490668,0.000008621436,0.000023083669,0.000011124894,0.0000060043963,0.00038128224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890846,0.00040065494,0.00026767104,0.00013900637,0.000048870606,0.00023530783],"domain_scores_gemma":[0.99911433,0.00050351705,0.00006886832,0.00024151163,0.000055980676,0.000015774398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023346754,0.00008607076,0.00018223833,0.000022041822,0.00009155306,0.0000057356406,0.00020089698,0.000072935756,0.00025950195],"category_scores_gemma":[0.00010440768,0.000046121928,0.00006471167,0.00009467185,0.00019083411,0.000019518113,0.000033450735,0.0001358509,0.000036937636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015657462,0.00012563064,0.06473566,0.000011268646,0.000099026074,0.000010385176,0.002199518,0.00006021506,0.8490199,0.00024775855,0.000070640664,0.08326344],"study_design_scores_gemma":[0.0007860769,0.00006153414,0.030672546,0.000045567645,0.000015395353,0.0000073793894,0.0020272983,0.000028635171,0.91654545,0.00009115002,0.049667023,0.00005194551],"about_ca_topic_score_codex":0.0029414336,"about_ca_topic_score_gemma":0.001739849,"teacher_disagreement_score":0.0832115,"about_ca_system_score_codex":0.000017146187,"about_ca_system_score_gemma":0.00014415587,"threshold_uncertainty_score":0.44465873},"labels":[],"label_agreement":null},{"id":"W3196360981","doi":"10.3390/v13091721","title":"Validation of a Genotype-Independent Hepatitis C Virus Near-Whole Genome Sequencing Assay","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; Western University; AIDS Vancouver; University of British Columbia","funders":"Genome British Columbia","keywords":"NS5B; Genotype; Genotyping; Virology; Biology; Hepatitis C virus; NS5A; Genetics; Hepacivirus; Virus; Gene","score_opus":0.0611409409201387,"score_gpt":0.33174462277589983,"score_spread":0.2706036818557611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196360981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99096817,0.0009203689,0.0009200217,0.00017606153,0.0001407237,0.00030992724,0.00021774416,0.00007917972,0.006267791],"genre_scores_gemma":[0.99436307,0.0005552634,0.0030988709,0.00067390286,0.00015978275,0.00003088951,0.00014600041,0.0000529779,0.000919263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99770474,0.00023634169,0.0004547775,0.00037398317,0.00085535797,0.00037479258],"domain_scores_gemma":[0.9985063,0.00014346735,0.000118356314,0.00055708614,0.00047185554,0.00020290942],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00052352564,0.00016800188,0.00039716586,0.00014744423,0.00011623122,0.000063555875,0.00013262362,0.00014185175,0.0024949121],"category_scores_gemma":[0.00080966094,0.00016870555,0.00012196157,0.000491092,0.000108813,0.00020183832,0.00014196795,0.0002834429,0.00073656975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050806255,0.00011858392,0.07022277,0.00013053716,0.000119571334,0.0006129625,0.0004216557,0.00008413876,0.92116994,0.000107943095,0.00032288092,0.006638209],"study_design_scores_gemma":[0.00084627885,0.00020325772,0.042279325,0.000117287615,0.00008121555,0.00008099799,0.00007440121,0.00043934202,0.9036304,0.00011834579,0.051925477,0.00020367325],"about_ca_topic_score_codex":0.005042962,"about_ca_topic_score_gemma":0.0010432921,"teacher_disagreement_score":0.051602595,"about_ca_system_score_codex":0.0003520837,"about_ca_system_score_gemma":0.0011083516,"threshold_uncertainty_score":0.99841696},"labels":[],"label_agreement":null},{"id":"W3196382384","doi":"10.3390/v13091734","title":"Examining the Effects of an Anti-Salmonella Bacteriophage Preparation, BAFASAL®, on Ex-Vivo Human Gut Microbiome Composition and Function Using a Multi-Omics Approach","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Microbiome; Biology; Salmonella; Gut microbiome; Food chain; Gut flora; Salmonella enterica; Antibiotics; Human pathogen; Human microbiome; Human health; Bacteriophage; Metagenomics; Pathogenic bacteria; Biotechnology; Microbiology; Bacteria; Gene; Escherichia coli; Bioinformatics; Immunology; Genetics; Ecology; Medicine; Environmental health","score_opus":0.036595330093281565,"score_gpt":0.28163372055982316,"score_spread":0.2450383904665416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196382384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808776,0.00005749538,0.0011830284,0.0000046721,0.00020426385,0.00024277777,0.00002383334,0.000026717731,0.0001694197],"genre_scores_gemma":[0.99745804,0.000019826828,0.0020724188,0.0002387642,0.000045730645,0.0000074886107,0.000042908458,0.000019266528,0.00009557296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910575,0.00014019951,0.00021182615,0.0003193971,0.00007677184,0.00014606309],"domain_scores_gemma":[0.9994915,0.000059854752,0.00013525345,0.0002537914,0.000015181967,0.00004438012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009768964,0.00014400209,0.00015396636,0.000037869933,0.0002970274,0.000100980884,0.000086319036,0.0000671204,0.00012057908],"category_scores_gemma":[0.0000111782565,0.00012156646,0.00003602846,0.00014661068,0.00013903211,0.00039041025,0.00010263524,0.00009997692,0.000014970285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002947442,0.0002830579,0.00091441954,0.000033307875,0.00002186001,0.0000041366798,0.00047130242,0.00028009806,0.99758613,0.000011562451,0.000031092695,0.00033355085],"study_design_scores_gemma":[0.00040169893,0.00018613612,0.176374,0.000055150136,0.000069155096,0.00005772031,0.00015712151,0.00091762835,0.82121146,0.0000042402985,0.00041720632,0.0001485081],"about_ca_topic_score_codex":0.00029469052,"about_ca_topic_score_gemma":0.000047213274,"teacher_disagreement_score":0.1763747,"about_ca_system_score_codex":0.00005562164,"about_ca_system_score_gemma":0.000007818648,"threshold_uncertainty_score":0.49573362},"labels":[],"label_agreement":null},{"id":"W3197329507","doi":"10.3390/v13091790","title":"Dating the Common Ancestor from an NCBI Tree of 83688 High-Quality and Full-Length SARS-CoV-2 Genomes","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Most recent common ancestor; Phylogenetic tree; Genome; Biology; Ancestor; Phylogenetics; Evolutionary biology; Coronavirus disease 2019 (COVID-19); Whole genome sequencing; Genetics; Gene; Geography; Medicine; Archaeology","score_opus":0.16792038971928794,"score_gpt":0.42870192417165703,"score_spread":0.26078153445236907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3197329507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944358,0.0039466135,0.000017464508,0.00040643848,0.00010687691,0.00018437611,0.00011186516,0.000049869584,0.0007407353],"genre_scores_gemma":[0.9631543,0.000058764846,0.0004696095,0.03598222,0.00027345784,0.000016095773,0.000014264446,0.000024464016,0.0000067979745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982977,0.0002801426,0.00037046563,0.00036575523,0.00042702846,0.0002589002],"domain_scores_gemma":[0.99834704,0.000660543,0.00012311027,0.0007075388,0.0001279638,0.0000337806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004599211,0.00016137409,0.00042969166,0.000062325,0.00013034308,0.00005343623,0.00021128023,0.000087078326,0.000026409662],"category_scores_gemma":[0.0004005876,0.00011390172,0.00006412527,0.00025170122,0.00023761726,0.00017016311,0.00016645859,0.00026864617,0.000018863748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022028164,0.0001525693,0.22521912,0.000069324626,0.0000836345,0.00003809891,0.0004901693,8.631802e-8,0.7556011,0.00033965913,0.00022437263,0.017561598],"study_design_scores_gemma":[0.0009994931,0.00020765005,0.1824862,0.00006547786,0.00006206621,0.0000093455665,0.0006671333,0.0000457345,0.778965,0.0005089418,0.035856053,0.00012691667],"about_ca_topic_score_codex":0.0045289597,"about_ca_topic_score_gemma":0.0026675172,"teacher_disagreement_score":0.042732902,"about_ca_system_score_codex":0.000041280047,"about_ca_system_score_gemma":0.00021268621,"threshold_uncertainty_score":0.68464625},"labels":[],"label_agreement":null},{"id":"W3198154675","doi":"10.3390/v13091752","title":"Clinical Evaluation of In-House-Produced 3D-Printed Nasopharyngeal Swabs for COVID-19 Testing","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; École de Technologie Supérieure; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fondation du CHUM","keywords":"Economic shortage; Medicine; Coronavirus disease 2019 (COVID-19); Concordance; 3d printed; Context (archaeology); Pandemic; Medical physics; Pathology; Internal medicine; Infectious disease (medical specialty); Biomedical engineering","score_opus":0.35735912080448606,"score_gpt":0.4789015475053663,"score_spread":0.12154242670088022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198154675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762934,0.0002961584,0.00029686093,0.00018704505,0.00037982248,0.00052289857,0.000005235782,0.00020984668,0.00047281463],"genre_scores_gemma":[0.9861273,0.000003576775,0.0070460904,0.006426881,0.00029118842,0.000054279215,0.0000036750534,0.00003547786,0.000011501712],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836653,0.00019545433,0.00059107196,0.0003513786,0.0003263907,0.00016919326],"domain_scores_gemma":[0.9971674,0.0016422807,0.00018498224,0.00029014878,0.00064133754,0.00007386067],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0021601985,0.00010489496,0.00032065672,0.00012935542,0.000054718148,0.000010892476,0.00005572605,0.00009234903,0.00004760986],"category_scores_gemma":[0.061352514,0.000102993676,0.0000858977,0.0004787428,0.000052949687,0.00006059325,0.00003935307,0.00016949438,0.000019410058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024371981,0.00027873655,0.26846248,0.00019620461,0.000051261817,0.000025038888,0.00013937525,0.00006070022,0.678485,0.000025217341,0.00021111264,0.05182118],"study_design_scores_gemma":[0.007090388,0.00039782087,0.04935882,0.00025143294,0.00026081962,0.000077037366,0.00019858326,0.022415027,0.9143278,0.00033119266,0.0051205056,0.00017058711],"about_ca_topic_score_codex":0.00013781434,"about_ca_topic_score_gemma":0.00010865789,"teacher_disagreement_score":0.23584281,"about_ca_system_score_codex":0.00011563894,"about_ca_system_score_gemma":0.0009148553,"threshold_uncertainty_score":0.9465541},"labels":[],"label_agreement":null},{"id":"W3198538796","doi":"10.3390/v13091730","title":"Distribution and Pathogenicity of Two Cutthroat Trout Virus (CTV) Genotypes in Canada","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fisheries and Oceans Canada","funders":"Fisheries and Oceans Canada","keywords":"Biology; Oncorhynchus; Salmo; Genotype; Trout; Zoology; Virology; Genome; Phylogenetic tree; Genetics; Gene; Fishery; Fish <Actinopterygii>","score_opus":0.03246083571868652,"score_gpt":0.3129822767142131,"score_spread":0.28052144099552656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198538796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99741393,0.0015789779,0.00011672308,0.00036300684,0.000047156944,0.00007593542,0.00032598845,0.000005399463,0.00007286961],"genre_scores_gemma":[0.9979617,0.0010064772,0.0001653708,0.00071624125,0.0000390436,0.0000055192672,0.00007948439,0.0000054265374,0.000020716494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99913466,0.00011948147,0.00022099276,0.00016061905,0.0001245046,0.00023976283],"domain_scores_gemma":[0.9996358,0.00003439041,0.000036941216,0.0001261133,0.000057907786,0.00010883433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001197701,0.000070474925,0.00028040865,0.000023286002,0.000020310363,0.0000034761374,0.00003341407,0.000027018306,0.00009482444],"category_scores_gemma":[0.0004201497,0.000062739164,0.000027760763,0.000100272795,0.00006352481,0.000041340907,0.000053509968,0.00011786028,0.0000025568752],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001996305,0.000057398596,0.7640315,0.00005411709,0.000026034882,0.00028353668,0.000016573502,0.000008237228,0.22871599,0.000119810284,0.001255602,0.0052315625],"study_design_scores_gemma":[0.0015046069,0.00019951873,0.9227212,0.00008424701,0.000020709851,0.00010733599,0.00010774655,0.00016660683,0.07022348,0.00015140053,0.00463966,0.00007347001],"about_ca_topic_score_codex":0.74751294,"about_ca_topic_score_gemma":0.9077646,"teacher_disagreement_score":0.16025169,"about_ca_system_score_codex":0.00015444218,"about_ca_system_score_gemma":0.0005012328,"threshold_uncertainty_score":0.2558429},"labels":[],"label_agreement":null},{"id":"W3198633689","doi":"10.3390/v13091796","title":"Histotype-Dependent Oligodendroglial PrP Pathology in Sporadic CJD: A Frequent Feature of the M2C “Strain”","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto; University Health Network","funders":"Medizinische Universität Wien; Universität Wien","keywords":"Pathology; White matter; Grey matter; Oligodendroglial Tumor; Immunohistochemistry; Molecular pathology; Phenotype; Biology; Disease; Oligodendroglioma; Medicine; Magnetic resonance imaging; Genetics; Gene; Glioma; Astrocytoma","score_opus":0.012057147873981213,"score_gpt":0.24937923293478545,"score_spread":0.23732208506080424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198633689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97908276,0.019644588,0.000035986137,0.00034618945,0.0002580481,0.00013233161,0.00014323666,0.0000066317825,0.00035022545],"genre_scores_gemma":[0.9975983,0.00096178293,0.00021088349,0.00076177914,0.00011838065,0.000015165861,0.000026201526,0.000014108292,0.00029342208],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991888,0.00010915341,0.00015908339,0.00025432248,0.00011636353,0.00017232037],"domain_scores_gemma":[0.9994569,0.000007954766,0.00007922774,0.00037039223,0.00004047388,0.000045058503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010385083,0.00010757232,0.00013386033,0.00002509305,0.000037888924,0.00000924138,0.00019717726,0.00014344511,0.00009010053],"category_scores_gemma":[0.00011122505,0.00008642249,0.00010761916,0.00009391132,0.000070128866,0.000002881019,0.00013684983,0.000111977024,0.0000047628255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005929343,0.000082636136,0.01246654,0.000026907575,0.000022018758,0.00007955413,0.000050683848,0.00004527822,0.9819465,0.00027852363,0.00067339314,0.0042686206],"study_design_scores_gemma":[0.00062842976,0.00008010668,0.016538128,0.00004775283,0.0000253251,0.00007542582,0.00008661805,0.0000056364884,0.9234439,0.00039928747,0.058499772,0.00016963219],"about_ca_topic_score_codex":0.000039393137,"about_ca_topic_score_gemma":0.00016722734,"teacher_disagreement_score":0.058502663,"about_ca_system_score_codex":0.000021620643,"about_ca_system_score_gemma":0.00018679457,"threshold_uncertainty_score":0.3524207},"labels":[],"label_agreement":null},{"id":"W3198711608","doi":"10.3390/v13091744","title":"Meat Exudate for Detection of African Swine Fever Virus Genomic Material and Anti-ASFV Antibodies","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Canadian Food Inspection Agency","funders":"National Institute of General Medical Sciences","keywords":"African swine fever virus; Virulence; Virology; Biology; Exudate; Virus; African swine fever; Viremia; Antibody; Immunology; Gene","score_opus":0.04732380616866013,"score_gpt":0.2581383961914735,"score_spread":0.21081459002281336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198711608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988739,0.00034912615,0.000015952177,0.00018369145,0.00013120323,0.000103175094,0.00018513708,0.000027047294,0.00013075424],"genre_scores_gemma":[0.9989301,0.00038729294,0.000068671696,0.00028504568,0.00020121605,0.0000071132654,0.000039343035,9.4828846e-7,0.00008029027],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994214,0.000047060767,0.00015028923,0.00019103375,0.00004211138,0.00014810775],"domain_scores_gemma":[0.9997532,0.000085864296,0.00006336474,0.000030727504,0.00003225074,0.000034636152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000086154134,0.000083540304,0.00018369252,0.0000096488175,0.00009853936,0.00002382004,0.00005959813,0.000041199204,0.00021274017],"category_scores_gemma":[0.00005391613,0.000035711266,0.00005058456,0.00007443421,0.000059509443,0.0000799417,0.00008398988,0.000018413104,0.000007109039],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000778955,0.000024653638,0.013196325,0.0000178846,0.000022225247,0.0000016519448,0.000011582347,9.04216e-7,0.9808112,0.00018626609,0.0003156432,0.0053337617],"study_design_scores_gemma":[0.00012040139,0.00010638474,0.6660452,0.000007010546,0.000042414034,0.000001482218,0.00016988908,0.000029295079,0.30063266,0.00046492176,0.032268938,0.00011143602],"about_ca_topic_score_codex":0.00033472004,"about_ca_topic_score_gemma":0.00041484693,"teacher_disagreement_score":0.6801786,"about_ca_system_score_codex":0.000004292769,"about_ca_system_score_gemma":0.000002438828,"threshold_uncertainty_score":0.23293558},"labels":[],"label_agreement":null},{"id":"W3199267449","doi":"10.3390/v13091871","title":"Towards a Systems Immunology Approach to Understanding Correlates of Protective Immunity against HCV","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Immunology; Immunity; Immune system; Hepatitis C virus; Systems biology; Biology; Virology; Computational biology; Virus","score_opus":0.28664683331324253,"score_gpt":0.4121388421340643,"score_spread":0.1254920088208218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199267449","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000065954584,0.97079563,0.0018046454,0.000010869926,0.00033686106,0.0043674414,0.00022640963,0.00009009441,0.022302117],"genre_scores_gemma":[0.0012952706,0.99680144,0.0002920648,0.000040519124,0.00012444361,0.0009589195,0.00016861154,0.00013167309,0.00018707178],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99598694,0.0011560569,0.0010249465,0.0006119639,0.0006397721,0.0005802927],"domain_scores_gemma":[0.9976733,0.00040607568,0.00039450743,0.0010328983,0.0002737265,0.00021953418],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008371923,0.0005238499,0.0035218527,0.0008603738,0.00013786259,0.00006039407,0.0004408659,0.0007018492,0.00004765372],"category_scores_gemma":[0.0014387318,0.00042217993,0.00051211705,0.0014085084,0.00025248734,0.00008378683,0.00049531576,0.0014594217,0.00012361397],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014266987,0.0008601776,0.000116783645,0.079353034,0.0049184524,0.00022896416,0.0011769005,0.000013769174,0.000106924104,0.009312397,0.00074046536,0.90302944],"study_design_scores_gemma":[0.0005381003,0.00051212107,0.000011801956,0.050767336,0.00076919916,0.000101172394,0.0012647122,0.00003912005,0.00005572182,0.000026202268,0.945401,0.00051349914],"about_ca_topic_score_codex":0.0013706414,"about_ca_topic_score_gemma":0.000013729308,"teacher_disagreement_score":0.94466054,"about_ca_system_score_codex":0.0014930943,"about_ca_system_score_gemma":0.0020881933,"threshold_uncertainty_score":0.999823},"labels":[],"label_agreement":null},{"id":"W3199687507","doi":"10.3390/v13091815","title":"Personalized Virus Load Curves for Acute Viral Infections","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Viral load; Virus; Rhinovirus; Function (biology); Exponential function; Computer science; Virology; Influenza A virus; Exponential growth; Biology; Mathematics","score_opus":0.30447007780603236,"score_gpt":0.4781752148302353,"score_spread":0.17370513702420293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199687507","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7760626,0.05112961,0.11507731,0.0333284,0.0026148034,0.0036904963,0.0025150436,0.003027585,0.012554168],"genre_scores_gemma":[0.32306454,0.08730492,0.17015427,0.36161274,0.0048245336,0.007115574,0.00023884825,0.0006393284,0.04504526],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987758,0.00013128549,0.00030831117,0.00031427722,0.00017826559,0.0002920801],"domain_scores_gemma":[0.9955555,0.0038202554,0.00010405616,0.000258317,0.00019737506,0.00006446397],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00037176124,0.00017674203,0.00045117387,0.000026062542,0.00025611182,0.000025522208,0.00011603652,0.000081099766,0.000502367],"category_scores_gemma":[0.011124596,0.00014021764,0.00024890978,0.00017216076,0.000119943215,0.00010363724,0.0001496985,0.00011583913,0.00008501872],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019058259,0.0012738052,0.009432078,0.0010053868,0.0020131757,0.00006281297,0.0007228413,0.000008952881,0.043667935,0.21013184,0.7277776,0.0037129656],"study_design_scores_gemma":[0.0009626076,0.00018317434,0.0013101079,0.00016650387,0.00051454676,0.000013133588,0.00008279158,0.000056053872,0.012979444,0.17941841,0.8039316,0.00038162162],"about_ca_topic_score_codex":0.00014826868,"about_ca_topic_score_gemma":0.0003213246,"teacher_disagreement_score":0.45299804,"about_ca_system_score_codex":0.00011627352,"about_ca_system_score_gemma":0.00011322209,"threshold_uncertainty_score":0.99720514},"labels":[],"label_agreement":null},{"id":"W3199948235","doi":"10.3390/v13091824","title":"Mouse Papillomavirus L1 and L2 Are Dispensable for Viral Infection and Persistence at Both Cutaneous and Mucosal Tissues","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Medical Research Council; Canadian Institutes of Health Research; Penn State College of Medicine; Cancer Research UK; National Institutes of Health; National Institute of Dental and Craniofacial Research; Pennsylvania State University; University of Pennsylvania; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Biology; Mutant; Capsid; In situ hybridization; Viral replication; Knockout mouse; Immunohistochemistry; Virology; Bovine papillomavirus; Viral protein; Virus; Molecular biology; Gene; Gene expression; Genome; Immunology; Genetics","score_opus":0.06580094673679449,"score_gpt":0.33977106508124344,"score_spread":0.27397011834444895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199948235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991819,0.00658007,0.000014767472,0.00034636047,0.00003644661,0.00023709273,0.000055887343,0.00003594392,0.0008744191],"genre_scores_gemma":[0.99123704,0.004893669,0.00017500864,0.0006400031,0.0001375374,0.000023747343,0.000012816196,0.000019714447,0.0028604653],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99923164,0.000022911488,0.000104024635,0.000287095,0.0001491355,0.00020522645],"domain_scores_gemma":[0.9994923,0.00011445631,0.0000251614,0.00012350736,0.00007909521,0.00016550702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000056374494,0.00010656493,0.0002167031,0.00003922353,0.0001718396,0.000064575106,0.000019090874,0.00006459865,0.00034415882],"category_scores_gemma":[0.00014302014,0.000090781235,0.000029629391,0.00006387369,0.00014234934,0.00009402679,0.00010318044,0.000092262904,0.0000065777035],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028664214,0.0002772868,0.76068974,0.002138378,0.00018515984,0.0004575309,0.0009410854,0.000002418691,0.14520761,0.00042909576,0.004240653,0.08256462],"study_design_scores_gemma":[0.0061925906,0.0023608913,0.57292247,0.0002062737,0.00036801826,0.0017978171,0.0009715817,0.0008103862,0.21333653,0.00069513463,0.19967416,0.00066415244],"about_ca_topic_score_codex":0.0004349848,"about_ca_topic_score_gemma":0.0014277585,"teacher_disagreement_score":0.19543351,"about_ca_system_score_codex":0.00004696632,"about_ca_system_score_gemma":0.00003304493,"threshold_uncertainty_score":0.37682977},"labels":[],"label_agreement":null},{"id":"W3200102615","doi":"10.3390/v13091854","title":"VP8, the Major Tegument Protein of Bovine Herpesvirus-1, Is Partially Packaged during Early Tegument Formation in a VP22-Dependent Manner","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Viral tegument; Bovine herpesvirus 1; Biology; Viral replication; Cytoplasm; Immunoprecipitation; Virology; Phosphorylation; Viral envelope; Blot; Molecular biology; Cell culture; Virus; Herpesviridae; Cell biology; Gene; Biochemistry; Genetics; Viral disease","score_opus":0.020900364884684827,"score_gpt":0.2746370718341499,"score_spread":0.2537367069494651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200102615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961919,0.0003766274,0.000067867964,0.0009125699,0.00009162724,0.0010739164,0.000055295182,0.000047472382,0.0011827174],"genre_scores_gemma":[0.9970339,0.000074282005,0.00021786326,0.00048448757,0.00007193679,0.000361273,0.000013805281,0.000029132001,0.0017133307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826944,0.00013752539,0.0005504308,0.000289431,0.00043800176,0.00031518989],"domain_scores_gemma":[0.9990976,0.00003286817,0.00016050236,0.0005067929,0.00011078364,0.00009145161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024476726,0.0002121589,0.0003271798,0.0001341325,0.00014210501,0.00004686897,0.00008243163,0.00009203244,0.00087216124],"category_scores_gemma":[0.000060936887,0.00014658774,0.00012312207,0.00033648597,0.00005179989,0.00024522986,0.000088545814,0.00020847832,0.00014309326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021814783,0.0072146286,0.22488624,0.0010769035,0.0016602386,0.0015057382,0.0069357813,0.000061831364,0.710876,0.0013971591,0.0009440618,0.041259978],"study_design_scores_gemma":[0.0034261544,0.00028900802,0.11171968,0.00035507535,0.00014897322,0.000054691827,0.0003066855,0.000032055024,0.8741742,0.0001419813,0.009181705,0.00016980366],"about_ca_topic_score_codex":0.0009947796,"about_ca_topic_score_gemma":0.000945287,"teacher_disagreement_score":0.16329822,"about_ca_system_score_codex":0.00022650193,"about_ca_system_score_gemma":0.00009957781,"threshold_uncertainty_score":0.9549554},"labels":[],"label_agreement":null},{"id":"W3200200342","doi":"10.3390/v13091827","title":"The Isolated in Utero Environment Is Conducive to the Emergence of RNA and DNA Virus Variants","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Virus; Biology; Virology; DNA virus; Genome; RNA; RNA virus; In utero; Zika virus; Genetics; Fetus; Gene; Pregnancy","score_opus":0.04047538113210546,"score_gpt":0.2477204953502965,"score_spread":0.20724511421819103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200200342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99598604,0.0012452122,0.000004638638,0.0020879945,0.00007737105,0.000110106215,0.000056291145,0.000007689241,0.0004246451],"genre_scores_gemma":[0.99675286,0.0021711567,0.0000144667765,0.0008822152,0.00003538184,0.000016701417,6.6481005e-7,5.4164764e-7,0.00012601585],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993791,0.00007098102,0.00015094763,0.00016864405,0.00009453527,0.00013577518],"domain_scores_gemma":[0.9996571,0.00018670865,0.000043717617,0.00006342696,0.00002328351,0.000025776839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001228487,0.00007460327,0.00009262435,0.0000046247765,0.00027992117,0.000025085319,0.000121635545,0.000027606819,0.00040814764],"category_scores_gemma":[0.00007200546,0.000021889273,0.000025715735,0.00020881464,0.00009288848,0.000051434585,0.000188627,0.000058481197,0.00005347855],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000293911,0.00006292276,0.0074992664,0.0000016100726,0.0000320541,0.000005216594,0.0006012244,0.000005820611,0.9719295,0.0003714093,0.0025567773,0.01690479],"study_design_scores_gemma":[0.00010406506,0.0003476043,0.60244673,0.000023556064,0.000019054922,0.000007773673,0.0028338272,0.000037875307,0.22288828,0.0005311843,0.17057642,0.00018362771],"about_ca_topic_score_codex":0.00093226717,"about_ca_topic_score_gemma":0.003742075,"teacher_disagreement_score":0.74904126,"about_ca_system_score_codex":0.0000075043185,"about_ca_system_score_gemma":0.0000036670565,"threshold_uncertainty_score":0.44689307},"labels":[],"label_agreement":null},{"id":"W3200599534","doi":"10.3390/v13091829","title":"The Innate Immune DNA Sensing cGAS-STING Signaling Pathway Mediates Anti-PRRSV Function","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; Yangzhou University; Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Innate immune system; Sting; Porcine reproductive and respiratory syndrome virus; Biology; Gene knockdown; Virology; RIG-I; Immunity; Immune system; Virus; DNA virus; Immunology; Gene; Genetics; Genome","score_opus":0.039332608529783486,"score_gpt":0.23288749879972356,"score_spread":0.19355489026994008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200599534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960887,0.00211835,0.000018212335,0.0004187746,0.00046543567,0.0000671034,0.0000126197165,0.00013495199,0.00067587127],"genre_scores_gemma":[0.99869406,0.00028021054,0.00005999293,0.00032398608,0.000522671,0.00000410366,0.000009587748,0.0000018259952,0.00010354199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895465,0.00012493214,0.00023508523,0.00023814497,0.00016767213,0.0002794897],"domain_scores_gemma":[0.99903,0.00061947,0.00010634695,0.000059800615,0.00014975127,0.000034658602],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00031722648,0.00013449272,0.00014394338,0.0000087259905,0.0015688507,0.00016173502,0.00009371383,0.00005679623,0.00007897339],"category_scores_gemma":[0.00047766478,0.000047213736,0.00008596405,0.00041530642,0.000099883786,0.00011242715,0.00015946529,0.00013160639,0.0000801007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010287654,0.00001587311,0.0054711956,0.0000023616285,0.000031587617,0.0000058042415,0.000039905903,0.000013468847,0.9658838,0.00025249115,0.00010028838,0.028172955],"study_design_scores_gemma":[0.00009513303,0.00014514518,0.11949827,0.000058340996,0.000034241482,0.00001824959,0.002230398,0.00006870622,0.8072873,0.0007067164,0.06958432,0.00027318852],"about_ca_topic_score_codex":0.0002768341,"about_ca_topic_score_gemma":0.0006177419,"teacher_disagreement_score":0.15859649,"about_ca_system_score_codex":0.000019439945,"about_ca_system_score_gemma":0.000011794687,"threshold_uncertainty_score":0.99973094},"labels":[],"label_agreement":null},{"id":"W3200678190","doi":"10.3390/v13091833","title":"AMDV Vaccine: Challenges and Perspectives","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Mink; Immunology; Immunization; Disease; Virology; Biology; Medicine; Immune system; Pathology","score_opus":0.11877136965851408,"score_gpt":0.3910526058503451,"score_spread":0.27228123619183103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200678190","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029255607,0.99864036,0.0000015048873,0.000054473294,0.00006679327,0.00028098832,0.00004823569,0.00001766753,0.00059742853],"genre_scores_gemma":[0.00003052686,0.998669,0.00004394296,0.000077648765,0.00053990673,0.00008761613,0.000076900316,0.00008256285,0.0003918705],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983241,0.00029555708,0.0002251005,0.00071244646,0.00015294242,0.00028988652],"domain_scores_gemma":[0.9990565,0.00004575779,0.00009435986,0.0006125382,0.00008503727,0.00010580181],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020474855,0.0003556306,0.0007783429,0.00010232066,0.00006598928,0.000042738106,0.00027214762,0.00034024465,0.000093142386],"category_scores_gemma":[0.000115304465,0.0002990357,0.00023901706,0.000093312665,0.00006716109,0.0000029620899,0.0002786473,0.00021992192,0.00003765831],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048617407,0.000054838783,7.0199076e-7,0.001635897,0.00037147166,0.000014264451,0.00006235439,7.537546e-8,0.0007889091,0.00010398404,0.0010117147,0.9959072],"study_design_scores_gemma":[0.00015661803,0.00064607733,0.0000024498065,0.00091253914,0.00010854949,0.000040332463,0.00016833554,7.427128e-8,0.0013393157,0.000009026945,0.99629635,0.0003203598],"about_ca_topic_score_codex":0.000004471249,"about_ca_topic_score_gemma":0.00007485365,"teacher_disagreement_score":0.9955868,"about_ca_system_score_codex":0.000021330214,"about_ca_system_score_gemma":0.00026586239,"threshold_uncertainty_score":0.9999462},"labels":[],"label_agreement":null},{"id":"W3201817472","doi":"10.3390/v13102016","title":"An Opportunistic Survey Reveals an Unexpected Coronavirus Diversity Hotspot in North America","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Geological Survey; U.S. Department of Agriculture; Centers for Disease Control and Prevention; Canadian Institute for Advanced Research; Utah Division of Wildlife Resources; Utah Department of Health","keywords":"Mink; Coronavirus; Outbreak; Biology; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Pandemic; Veterinary medicine; 2019-20 coronavirus outbreak; Zoology; Medicine; Infectious disease (medical specialty); Ecology; Internal medicine; Disease","score_opus":0.20186388364270771,"score_gpt":0.40571536166868316,"score_spread":0.20385147802597545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201817472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985808,0.00020973221,0.00003667986,0.00003066016,0.0000821039,0.00019674102,0.00029701105,0.00009750909,0.0004687781],"genre_scores_gemma":[0.9654374,0.000026163543,0.00009143141,0.03413977,0.000073372175,0.000009999348,0.00016831791,0.000024913608,0.000028597042],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99791753,0.00046659674,0.00025557503,0.00048410037,0.00047673838,0.0003994813],"domain_scores_gemma":[0.99863046,0.00023302887,0.000064519394,0.00066230836,0.00025640478,0.00015324885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031707002,0.00017366062,0.00039620904,0.00018471164,0.00015588892,0.000042423228,0.00024835052,0.00008730976,0.00015435107],"category_scores_gemma":[0.0006147078,0.0001698402,0.000052500534,0.0009877108,0.00015152023,0.00021260032,0.00021809938,0.0002762241,0.000121163124],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047935074,0.00061849784,0.9047363,0.000027222502,0.000031993215,0.001581016,0.0004174563,7.654038e-7,0.0872977,0.000012683997,0.0001777416,0.004619277],"study_design_scores_gemma":[0.00096391357,0.0004117757,0.9786985,0.000024809384,0.000028452785,0.00001754793,0.00039535604,0.000097169584,0.006427547,0.000022692035,0.012716308,0.00019594742],"about_ca_topic_score_codex":0.014460154,"about_ca_topic_score_gemma":0.021247866,"teacher_disagreement_score":0.08087015,"about_ca_system_score_codex":0.00013024497,"about_ca_system_score_gemma":0.00052017753,"threshold_uncertainty_score":0.99661183},"labels":[],"label_agreement":null},{"id":"W3202031638","doi":"10.3390/v13101977","title":"Cell Entry of Animal Coronaviruses","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"National Natural Science Foundation of China","keywords":"Viral entry; Biology; Tropism; Tissue tropism; Virology; Coronavirus; Viral envelope; Virus; Lipid bilayer fusion; Cell; Pandemic; Transmission (telecommunications); Coronavirus disease 2019 (COVID-19); Computational biology; Genetics; Viral replication; Medicine; Disease; Infectious disease (medical specialty); Computer science","score_opus":0.17840852590640544,"score_gpt":0.4470760842640816,"score_spread":0.26866755835767614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202031638","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001337477,0.99093336,0.0000021486921,0.000003906506,0.00016423938,0.00053715147,0.00012330942,0.000056802815,0.006841626],"genre_scores_gemma":[0.000038433882,0.9899657,0.00007760266,0.009279641,0.00036741683,0.00006517418,0.000016948454,0.000089223555,0.00009986015],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977393,0.00015554416,0.00064814754,0.0004822024,0.0005909333,0.00038383203],"domain_scores_gemma":[0.99843603,0.00041648018,0.00024912195,0.0006889107,0.00015157234,0.00005786851],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019245523,0.00038772656,0.0021134343,0.00027737988,0.00003914535,0.000029124589,0.00030321846,0.00036771683,0.00023474332],"category_scores_gemma":[0.00022532715,0.00030040834,0.0006769383,0.00052623695,0.00015118132,0.000060543014,0.00022942666,0.0005391629,0.00050399534],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001976298,0.0010427705,0.0017963578,0.08633029,0.0006726075,0.0010246064,0.000083914456,5.7287153e-9,0.0045020347,0.00023840913,0.014515126,0.8895962],"study_design_scores_gemma":[0.0003679571,0.00030876204,0.000011530585,0.010653814,0.00080986554,0.00007236021,0.000028073897,2.1922853e-7,0.013588417,0.0000024071014,0.9739245,0.00023207442],"about_ca_topic_score_codex":0.0001612907,"about_ca_topic_score_gemma":0.0000049455075,"teacher_disagreement_score":0.9594094,"about_ca_system_score_codex":0.00011052805,"about_ca_system_score_gemma":0.0017025241,"threshold_uncertainty_score":0.9999448},"labels":[],"label_agreement":null},{"id":"W3202201702","doi":"10.3390/v13101955","title":"Reduced Infection Efficiency of Phage NCTC 12673 on Non-Motile Campylobacter jejuni Strains Is Related to Oxidative Stress","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Alberta","funders":"Canadian Institutes of Health Research; Ontario Ministry of Economic Development and Innovation","keywords":"Campylobacter jejuni; Microbiology; Biology; Infectivity; Flagellum; Campylobacter; Mutant; Pathogen; Gene; Virology; Bacteria; Genetics; Virus","score_opus":0.03338888966673774,"score_gpt":0.28613427342706255,"score_spread":0.2527453837603248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202201702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959298,0.000044721262,0.0000043055497,0.0005067231,0.00031298806,0.00018509927,0.00023337836,0.000056489633,0.002726525],"genre_scores_gemma":[0.99793637,0.00006447969,0.00003530728,0.0014499183,0.000082347644,0.000011331929,0.000082613864,0.0000018617038,0.00033576816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848646,0.00020831403,0.0003635818,0.0004537672,0.00016999285,0.00031791418],"domain_scores_gemma":[0.99919075,0.00026821086,0.00015282945,0.00013084513,0.00013226898,0.00012509107],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001782955,0.00019143322,0.00031793967,0.00003052263,0.00012156387,0.00002624121,0.00017295904,0.00016752709,0.0016978541],"category_scores_gemma":[0.00023167727,0.00008487311,0.0001273054,0.0006504593,0.00007186919,0.00010159421,0.00008292632,0.00015523632,0.00018360045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035073306,0.00040773253,0.030818714,0.0000074467257,0.00003519741,0.000010877684,0.00041664788,0.000033943255,0.95684195,0.00015271697,0.0009397188,0.010299973],"study_design_scores_gemma":[0.00016223636,0.0007214911,0.47182882,0.00006343112,0.000018424593,0.000005657116,0.00029618118,0.000017378974,0.5223447,0.00018503354,0.0041599013,0.0001967172],"about_ca_topic_score_codex":0.00068641175,"about_ca_topic_score_gemma":0.0003246712,"teacher_disagreement_score":0.44101012,"about_ca_system_score_codex":0.00003300039,"about_ca_system_score_gemma":0.000018263374,"threshold_uncertainty_score":0.9992147},"labels":[],"label_agreement":null},{"id":"W3202310564","doi":"10.3390/v13101969","title":"Newlavirus, a Novel, Highly Prevalent, and Highly Diverse Protoparvovirus of Foxes (Vulpes spp.)","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fisheries and Oceans Canada; Université de Montréal; University of Saskatchewan; University of Prince Edward Island; Government of Newfoundland and Labrador; Government of Canada; Memorial University of Newfoundland","funders":"Ocean Frontier Institute; ArcticNet","keywords":"Vulpes; Mink; Biology; Mustelidae; Zoology; Genetic diversity; Genotype; Veterinary medicine; Ecology; Genetics; Gene; Population; Predation","score_opus":0.03789824854739498,"score_gpt":0.3158056005149882,"score_spread":0.2779073519675932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202310564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925026,0.0059840526,0.000083242514,0.00013523432,0.00009554831,0.00047953756,0.00021017953,0.000024870424,0.00048470925],"genre_scores_gemma":[0.99424165,0.0026603285,0.0008105708,0.00071425625,0.000237378,0.00010490581,0.000051672614,0.000050431565,0.0011287828],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983862,0.00012849523,0.00029597402,0.0005360743,0.00029846703,0.00035479097],"domain_scores_gemma":[0.9989356,0.000036928177,0.00011571421,0.00058142724,0.00018835352,0.00014198406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022034603,0.00023366236,0.00026798985,0.0000806907,0.000101842015,0.000046349236,0.0002606777,0.00015621608,0.00013963223],"category_scores_gemma":[0.00014775617,0.0002228628,0.00010283042,0.00019234676,0.00024537617,0.000014966149,0.00035659788,0.00011612158,0.000034172637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011889709,0.00022852131,0.0072785527,0.0000991121,0.00014104696,0.000015400326,0.000054894284,0.000015753763,0.9861278,0.00013010118,0.0013554818,0.0033643742],"study_design_scores_gemma":[0.0011737378,0.0011477873,0.0019128307,0.00003676516,0.000033687447,0.000017032131,0.00005303835,0.00000882084,0.93748504,0.000059805887,0.05783423,0.00023721578],"about_ca_topic_score_codex":0.00016802228,"about_ca_topic_score_gemma":0.00044738053,"teacher_disagreement_score":0.05647875,"about_ca_system_score_codex":0.000015069907,"about_ca_system_score_gemma":0.00023876088,"threshold_uncertainty_score":0.9088081},"labels":[],"label_agreement":null},{"id":"W3202548457","doi":"10.3390/v13102002","title":"Macrophage Depletion via Clodronate Pretreatment Reduces Transgene Expression from AAV Vectors In Vivo","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Transgene; White pulp; Genetic enhancement; In vivo; Gene delivery; Spleen; Transduction (biophysics); Viral vector; Biology; Immune system; Transfection; Adeno-associated virus; Molecular biology; Cancer research; Cell biology; Immunology; Vector (molecular biology); Gene; Biochemistry; Biotechnology","score_opus":0.02118776969689968,"score_gpt":0.29817212216879235,"score_spread":0.2769843524718927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202548457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922536,0.006940036,0.00014098648,0.000071176946,0.000131467,0.00017902833,0.00013552954,0.000019182013,0.00012898461],"genre_scores_gemma":[0.996981,0.0016826243,0.00040550402,0.00024456927,0.00016608773,0.000059213653,0.00017250118,0.000038074482,0.0002503809],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998562,0.00022754239,0.00020809496,0.0005009313,0.00021261322,0.00028886477],"domain_scores_gemma":[0.9994078,0.000021245549,0.000043716354,0.0003887748,0.00004760878,0.00009084901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011184058,0.0001822984,0.00016168074,0.00005360731,0.000066996174,0.000029993647,0.00016397884,0.00015802523,0.0007356363],"category_scores_gemma":[0.000028338281,0.00017184639,0.00008254704,0.0001353557,0.00005155461,0.0000076166107,0.0000695506,0.000101103265,0.000039034883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010193508,0.00018700151,0.0022524034,0.000007192713,0.000048636906,0.000052216594,0.000100382524,0.00013775253,0.99137694,6.6315846e-7,0.00030691852,0.0045105447],"study_design_scores_gemma":[0.0008711609,0.00056711084,0.0014674771,0.000030492298,0.000009759014,0.0000033388687,0.00004891094,0.000025326319,0.9913649,0.0000483818,0.005384659,0.0001784855],"about_ca_topic_score_codex":0.00022096906,"about_ca_topic_score_gemma":0.000988068,"teacher_disagreement_score":0.005257412,"about_ca_system_score_codex":0.000045505472,"about_ca_system_score_gemma":0.00010604479,"threshold_uncertainty_score":0.8054701},"labels":[],"label_agreement":null},{"id":"W3202878268","doi":"10.3390/v13101932","title":"Efficacy of Salmonella Bacteriophage S1 Delivered and Released by Alginate Beads in a Chicken Model of Infection","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Bacteriophage; Salmonella; Microbiology; Virology; Biology; Bacteria; Escherichia coli; Genetics","score_opus":0.013347186612240679,"score_gpt":0.24328034807638357,"score_spread":0.2299331614641429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202878268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99899364,0.00008535004,0.00016756853,0.000023870078,0.00003494271,0.00007831616,0.000074432355,0.000009163203,0.00053271407],"genre_scores_gemma":[0.99910265,0.00025113576,0.00037578924,0.000082730985,0.0000041510975,0.0000033620177,0.000016802205,0.0000088654315,0.00015452967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994289,0.00003528403,0.0001990485,0.00017187778,0.00005984822,0.00010502206],"domain_scores_gemma":[0.9997089,0.000033448858,0.000084161205,0.00012850118,0.000009274702,0.000035712917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000040315288,0.000081456885,0.00014413403,0.000030293348,0.000026442305,0.000010722242,0.00004289444,0.000049351995,0.0006106815],"category_scores_gemma":[0.00002730955,0.000083130966,0.000036916943,0.0001455614,0.000089746274,0.00018785858,0.00008849085,0.00007254453,0.000026097438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046520545,0.00017479013,0.0077193226,0.000012576061,0.000007900022,0.0000020988139,0.00015736386,0.00033777283,0.9891215,0.000006332392,0.00024510763,0.0021686922],"study_design_scores_gemma":[0.000598708,0.000047291112,0.25439385,0.000046674384,0.000016003867,0.000005464468,0.000016667545,0.0015435593,0.74241185,0.000015902211,0.00080935133,0.000094661176],"about_ca_topic_score_codex":0.0042783213,"about_ca_topic_score_gemma":0.00039562647,"teacher_disagreement_score":0.24670966,"about_ca_system_score_codex":0.000049449598,"about_ca_system_score_gemma":0.000010304666,"threshold_uncertainty_score":0.6686534},"labels":[],"label_agreement":null},{"id":"W3202952473","doi":"10.3390/v13101925","title":"Comparison of CRISPR–Cas9 Tools for Transcriptional Repression and Gene Disruption in the BEVS","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"CRISPR; Recombineering; Cas9; Biology; Genome editing; Gene; Psychological repression; CRISPR interference; Regulation of gene expression; Genetics; Reporter gene; RNA interference; Computational biology; Genome; Gene expression; RNA","score_opus":0.07482983922483222,"score_gpt":0.390342750784341,"score_spread":0.3155129115595088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202952473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992557,0.0041921083,0.002714729,0.00009089379,0.00010451088,0.00013731224,0.00008449356,0.0000033691315,0.00011556963],"genre_scores_gemma":[0.9987188,0.00029927655,0.00028638888,0.00038786652,0.00010542192,0.000050203565,0.0001174852,0.000006267034,0.000028277645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994266,0.000062526065,0.00016810921,0.00017937207,0.00007800907,0.000085383435],"domain_scores_gemma":[0.9996739,0.000040442443,0.000050718452,0.00016199026,0.000050655686,0.000022268932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000088352645,0.00006731056,0.000096284275,0.000016598393,0.000064648615,0.00002841196,0.00005793196,0.00006560353,0.00001589503],"category_scores_gemma":[0.00011268317,0.000049825718,0.000059425987,0.00004592715,0.00003755475,0.000008657414,0.000026657117,0.000035928642,4.1912136e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012050415,0.00015094505,0.012027997,0.000029462617,0.000011325652,6.6501235e-7,0.00011960598,0.00012432212,0.98176765,0.00025184365,0.0019515256,0.0034441443],"study_design_scores_gemma":[0.0004813403,0.00019281221,0.0289653,0.000026239326,0.000017105445,0.000007093614,0.00041174484,0.00007379873,0.9496947,0.0002918066,0.019756924,0.00008117083],"about_ca_topic_score_codex":0.00001590054,"about_ca_topic_score_gemma":0.00003778114,"teacher_disagreement_score":0.032072995,"about_ca_system_score_codex":0.0000028094062,"about_ca_system_score_gemma":0.000026717073,"threshold_uncertainty_score":0.20318338},"labels":[],"label_agreement":null},{"id":"W3202954574","doi":"10.3390/v13101929","title":"Primary HSV-2 Infection in Early Pregnancy Results in Transplacental Viral Transmission and Dose-Dependent Adverse Pregnancy Outcomes in a Novel Mouse Model","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Ontario HIV Treatment Network","keywords":"Pregnancy; Transplacental; Fetus; In utero; Herpes simplex virus; Medicine; Immunology; Viral shedding; Gestation; Placenta; Viral load; Inflammation; Andrology; Physiology; Biology; Virology; Virus","score_opus":0.031339189537075214,"score_gpt":0.2931012642641132,"score_spread":0.261762074727038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202954574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970579,0.00076273084,0.00025744495,0.00007247628,0.000065225984,0.0006785763,0.00010088764,0.00006011686,0.00094465434],"genre_scores_gemma":[0.9969028,0.0013778321,0.0006918819,0.00010751955,0.000007329078,0.00007883688,0.00003197733,0.000033307057,0.0007685179],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998409,0.0000701906,0.0005253891,0.0004662871,0.00022292345,0.0003062382],"domain_scores_gemma":[0.9995325,0.00004917811,0.000058959697,0.00022728938,0.000025727004,0.00010632564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009807306,0.00024175392,0.00040510594,0.00035199177,0.00004601271,0.000017213897,0.000034774053,0.00018534255,0.000014589694],"category_scores_gemma":[0.000033374752,0.00021555708,0.00008233886,0.0003034806,0.00003778786,0.00040634966,0.000024664114,0.00031462178,0.000008748311],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000740156,0.0043621515,0.9395442,0.00024109398,0.00004952366,0.00045542518,0.0028586178,0.0008309918,0.022242147,0.00003875571,0.0000013079666,0.028635612],"study_design_scores_gemma":[0.023850756,0.00028199077,0.948758,0.0027185425,0.000068126785,0.000026732947,0.000052861746,0.0013103271,0.022507513,0.00005255158,0.00009826705,0.00027429455],"about_ca_topic_score_codex":0.002960539,"about_ca_topic_score_gemma":0.0044418215,"teacher_disagreement_score":0.028361317,"about_ca_system_score_codex":0.00035395395,"about_ca_system_score_gemma":0.0002273364,"threshold_uncertainty_score":0.8790163},"labels":[],"label_agreement":null},{"id":"W3203166972","doi":"10.3390/v13102025","title":"Molecular Identification of Prune Dwarf Virus (PDV) Infecting Sweet Cherry in Canada and Development of a PDV Full-Length Infectious cDNA Clone","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; clone (Java method); Complementary DNA; Virology; Identification (biology); Genetics; Botany; Gene","score_opus":0.03154603629700249,"score_gpt":0.25427376773107907,"score_spread":0.2227277314340766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203166972","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986443,0.00096391584,0.000003879896,0.000051249895,0.00004236125,0.0001278606,0.00009764807,0.000011828672,0.000056990146],"genre_scores_gemma":[0.99938655,0.0004479914,0.00005599015,0.00005179572,0.000014551766,0.000018794946,0.000015880863,0.0000010565602,0.000007361759],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879,0.00010461431,0.00039495312,0.0002213848,0.00028066075,0.00020835722],"domain_scores_gemma":[0.99938583,0.00024624678,0.00015430301,0.00005201544,0.00011044647,0.000051146646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028268716,0.000107736014,0.0002313341,0.000027523669,0.00008835949,0.000017955042,0.00009447351,0.00004100609,0.000033734228],"category_scores_gemma":[0.0003828311,0.00005512522,0.000021180287,0.00041451093,0.000049303828,0.000088735214,0.00015134191,0.0000978782,0.0000020511914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001705903,0.00006419094,0.0402138,0.00003903043,0.000034389926,0.000016132431,0.0001663595,0.000020877038,0.94509566,0.000010085653,0.000017198503,0.014305222],"study_design_scores_gemma":[0.000095216514,0.000029202674,0.3600582,0.000036658905,0.000004131018,0.000004147617,0.00028635774,0.000017482389,0.63859296,0.000017974211,0.0007719301,0.00008575543],"about_ca_topic_score_codex":0.4495156,"about_ca_topic_score_gemma":0.92086935,"teacher_disagreement_score":0.47135377,"about_ca_system_score_codex":0.0000999189,"about_ca_system_score_gemma":0.00022518006,"threshold_uncertainty_score":0.5541501},"labels":[],"label_agreement":null},{"id":"W3203299644","doi":"10.3390/v13101987","title":"Characterization of Adaptive-like γδ T Cells in Ugandan Infants during Primary Cytomegalovirus Infection","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; BC Cancer Agency; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Cytomegalovirus; Cytomegalovirus infection; Virology; Primary (astronomy); Immunology; Medicine; Human cytomegalovirus; Cytomegalovirus infections; Biology; Virus; Herpesviridae; Viral disease","score_opus":0.030900155423985103,"score_gpt":0.29162910518834523,"score_spread":0.2607289497643601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203299644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972882,0.00020002267,0.00004625065,0.00004751726,0.00018534559,0.00032369455,0.00007832332,0.00005504459,0.0017755795],"genre_scores_gemma":[0.9972311,0.0013925183,0.000114003684,0.0003947637,0.00014244528,0.000025435109,0.000061903986,0.000039404113,0.00059839815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982995,0.000098026874,0.00047495292,0.00035438486,0.00043250603,0.0003406392],"domain_scores_gemma":[0.9991443,0.000055976594,0.00012972167,0.00034119847,0.00019813463,0.00013063215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021511201,0.00018168514,0.00045967379,0.00046935567,0.00006999659,0.000032999826,0.00006887891,0.00015066071,0.00044314502],"category_scores_gemma":[0.000063818385,0.0001810165,0.00010207387,0.0008608356,0.00008117211,0.00035283528,0.00011789608,0.00031350835,0.000104782106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006946626,0.00032894863,0.13434994,0.00023998634,0.000045847035,0.00013897884,0.00021078128,0.0000070856263,0.8609761,0.000030248593,0.000027227588,0.0029501712],"study_design_scores_gemma":[0.0011127057,0.0000817466,0.45954236,0.00015376412,0.000016454585,0.000020721194,0.000014199856,0.000029287461,0.53261524,0.0000063322454,0.006306706,0.00010048375],"about_ca_topic_score_codex":0.00067048025,"about_ca_topic_score_gemma":0.0003666781,"teacher_disagreement_score":0.3283609,"about_ca_system_score_codex":0.00020316767,"about_ca_system_score_gemma":0.00034371382,"threshold_uncertainty_score":0.7381639},"labels":[],"label_agreement":null},{"id":"W3204158467","doi":"10.3390/v13101891","title":"Markers of Gut Barrier Function and Microbial Translocation Associate with Lower Gut Microbial Diversity in People with HIV","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse; Canadian Institutes of Health Research; National Institutes of Health; National Institute of Mental Health; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Occludin; Phylogenetic diversity; Biology; Gut flora; Microbiology; Microbiome; Immunology; Tight junction; Phylogenetic tree; Genetics; Gene","score_opus":0.008384688563642181,"score_gpt":0.21379180210684803,"score_spread":0.20540711354320584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204158467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989982,0.00026087553,0.0002678261,0.000114282644,0.000063423526,0.00011372687,0.000076189855,0.0000049307328,0.000100528225],"genre_scores_gemma":[0.9988293,0.00016504801,0.00024013907,0.0003979144,0.0000381021,0.0000021898527,0.000094011644,0.000011651233,0.00022161174],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99935204,0.00005614475,0.00012335375,0.0002509906,0.000058581518,0.00015886425],"domain_scores_gemma":[0.9996732,0.0000063651237,0.00006742428,0.00012880481,0.00008162047,0.000042623295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090118694,0.00010639702,0.00014662146,0.00003658908,0.00008625748,0.000012398219,0.000048811202,0.0001072878,0.00004126448],"category_scores_gemma":[0.000009212965,0.00009560872,0.000027296883,0.000109984685,0.00006366192,0.000008854427,0.000056027133,0.000068927606,0.0000019774434],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010591785,0.000074727504,0.15148433,0.000037755985,0.00004729744,0.0000028314757,0.00014303312,0.000012110209,0.84624124,0.0000049003443,0.0007612772,0.00013133204],"study_design_scores_gemma":[0.0037396415,0.00073091645,0.6181473,0.000107677835,0.00009082348,0.000029261984,0.00034570464,0.000004692356,0.37063083,0.00000771854,0.005852423,0.0003130004],"about_ca_topic_score_codex":0.0003172816,"about_ca_topic_score_gemma":0.006937603,"teacher_disagreement_score":0.4756104,"about_ca_system_score_codex":0.00002148673,"about_ca_system_score_gemma":0.00016935743,"threshold_uncertainty_score":0.389881},"labels":[],"label_agreement":null},{"id":"W3204165173","doi":"10.3390/v13101953","title":"HIV-1 Envelope Glycoprotein Cell Surface Localization Is Associated with Antibody-Induced Internalization","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Internalization; Glycoprotein; Antibody; Cell biology; Viral envelope; Biology; Cell; Gp41; Virology; Chemistry; Immunology; Molecular biology; Epitope; Biochemistry","score_opus":0.023815840002036532,"score_gpt":0.27924663375857667,"score_spread":0.25543079375654015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204165173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98932326,0.0012661316,0.007240353,0.0001435046,0.00010908274,0.0002112546,0.00017640603,0.000085912325,0.0014440935],"genre_scores_gemma":[0.99294555,0.00013920615,0.00007317372,0.00040845727,0.0000090047715,0.000009064974,0.0014798414,0.00001987284,0.0049158405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902296,0.0002189567,0.00015863654,0.00026491357,0.00006529322,0.00026923118],"domain_scores_gemma":[0.9994652,0.00005963186,0.00007958217,0.00019108198,0.00017608656,0.000028366761],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000081989405,0.00013752548,0.00017279688,0.000044120417,0.00015063677,0.000035883255,0.00009297454,0.00013881859,0.0018899507],"category_scores_gemma":[0.00007914174,0.0001102196,0.000033167842,0.00026705186,0.000046523917,0.00011288436,0.000052198433,0.00012278855,0.0023315866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014371751,0.00039261964,0.077362135,0.000015390724,0.00029794336,0.00013619318,0.00039390562,0.00004817333,0.915893,0.000063824875,0.0047689504,0.0004841336],"study_design_scores_gemma":[0.001663999,0.0001895775,0.0047086226,0.000077913384,0.000031161282,0.000019111196,0.00009131195,0.000015534091,0.9726007,0.000015170408,0.020446124,0.00014075366],"about_ca_topic_score_codex":0.00020986832,"about_ca_topic_score_gemma":0.0000904719,"teacher_disagreement_score":0.07265351,"about_ca_system_score_codex":0.00007020977,"about_ca_system_score_gemma":0.0001602773,"threshold_uncertainty_score":0.9990225},"labels":[],"label_agreement":null},{"id":"W3204748243","doi":"10.3390/v13101960","title":"Alveolar-like Macrophages Attenuate Respiratory Syncytial Virus Infection","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Scheme for Promotion of Academic and Research Collaboration; Canadian Institutes of Health Research; Hospital for Sick Children; University of Ottawa","keywords":"Immunology; Virus; Respiratory system; Lung; Medicine; Asthma; Virology; Monoclonal antibody; Viral entry; Biology; Antibody; Viral replication; Internal medicine","score_opus":0.08357590015528307,"score_gpt":0.3902958258118374,"score_spread":0.30671992565655437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204748243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899881,0.0021216036,0.00024893097,0.0001552296,0.0006891153,0.0003045195,0.000026367354,0.00029621416,0.006169909],"genre_scores_gemma":[0.9853116,0.00072181365,0.00019828237,0.009469849,0.0010727118,0.000108564986,0.000020540201,0.00009827521,0.002998328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782866,0.0002885637,0.0003987604,0.0005017301,0.00054059154,0.00044170758],"domain_scores_gemma":[0.9984996,0.00010106355,0.000081505066,0.00067011453,0.00040255793,0.0002451738],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003596337,0.00023146656,0.00035182099,0.00031949327,0.00027872666,0.00011393908,0.000087862805,0.00019267004,0.0020262378],"category_scores_gemma":[0.0005637678,0.00021813333,0.00018132223,0.00082970643,0.00017650911,0.0003690024,0.00014842424,0.00052241323,0.0022511445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018002055,0.00033650035,0.13848051,0.00010707671,0.00015790637,0.00082604325,0.000037444388,0.000026591124,0.83700156,0.00015667552,0.012609939,0.010079719],"study_design_scores_gemma":[0.0009802539,0.00036399296,0.1117582,0.000063675725,0.00006980558,0.00011007102,0.000015557745,0.00001962867,0.5241833,0.000042498174,0.36220136,0.00019165865],"about_ca_topic_score_codex":0.00054089003,"about_ca_topic_score_gemma":0.00027888225,"teacher_disagreement_score":0.34959143,"about_ca_system_score_codex":0.0002045303,"about_ca_system_score_gemma":0.00047836095,"threshold_uncertainty_score":0.99888605},"labels":[],"label_agreement":null},{"id":"W3205002875","doi":"10.3390/v13112120","title":"PHIDA: A High Throughput Turbidimetric Data Analytic Tool to Compare Host Range Profiles of Bacteriophages Isolated Using Different Enrichment Methods","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sheridan College; University of Guelph; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Throughput; Host (biology); Range (aeronautics); Computational biology; Biology; Computer science; Engineering; Genetics; Telecommunications; Aerospace engineering","score_opus":0.08518756779551338,"score_gpt":0.36744544881409413,"score_spread":0.28225788101858074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3205002875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99375904,0.00034418877,0.004489087,0.00010878338,0.00039055475,0.0002957107,0.00047570775,0.000038615675,0.000098287645],"genre_scores_gemma":[0.9717361,0.000097401105,0.02735229,0.00043948484,0.000058720645,0.000010209181,0.00007782694,0.000024980052,0.00020303253],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99833584,0.00018563156,0.00042717633,0.0005676684,0.0001853831,0.00029831854],"domain_scores_gemma":[0.99871117,0.00013068558,0.00016703871,0.000860611,0.00003089174,0.00009958247],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015730118,0.00023305928,0.00042364319,0.0001037553,0.00012584525,0.000086043554,0.000444473,0.00004543053,0.0052318145],"category_scores_gemma":[0.000106792155,0.00019800253,0.00008249741,0.0008627855,0.00007737688,0.0004544696,0.0011371021,0.0001308563,0.00013313777],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003601163,0.00026383332,0.007190927,0.000026537627,0.00008609904,0.0000149728785,0.00016991177,0.00006779818,0.9872983,0.0000066212115,0.0007478452,0.0040911413],"study_design_scores_gemma":[0.00034794648,0.000075004056,0.5148005,0.000084849,0.00017707744,0.000026241642,0.00012701252,0.00081536575,0.47394216,0.0000072973507,0.009279434,0.00031712404],"about_ca_topic_score_codex":0.0031795427,"about_ca_topic_score_gemma":0.00033579677,"teacher_disagreement_score":0.51335615,"about_ca_system_score_codex":0.00017472942,"about_ca_system_score_gemma":0.00002397049,"threshold_uncertainty_score":0.99567753},"labels":[],"label_agreement":null},{"id":"W3206025475","doi":"10.3390/v13102092","title":"The Biogenesis of Dengue Virus Replication Organelles Requires the ATPase Activity of Valosin-Containing Protein","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec; Institut National de la Recherche Scientifique","funders":"Canadian Institutes of Health Research","keywords":"Viral replication; Biology; Virology; Dengue virus; Host factor; Cell biology; Viral structural protein; Viral protein; Biogenesis; Dengue fever; Virus; Viral entry; Gene; Genetics","score_opus":0.032722277095142416,"score_gpt":0.304955532086841,"score_spread":0.2722332549916986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3206025475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99274766,0.005192982,0.000084363135,0.0012817896,0.00004235646,0.00042445367,0.000052853302,0.000023717474,0.00014982646],"genre_scores_gemma":[0.99896777,0.00037358864,0.00005092748,0.00029463743,0.0001033027,0.00007815312,0.000004653093,0.000017581928,0.00010936527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998978,0.00014325227,0.00026867393,0.00023087733,0.00023304122,0.00014613214],"domain_scores_gemma":[0.99825287,0.0002882903,0.00022805562,0.00095326424,0.00022598892,0.00005152496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024731553,0.00010483065,0.0002268276,0.000025993588,0.00014593657,0.000017797738,0.00014073,0.00004766207,0.00006008078],"category_scores_gemma":[0.0008877359,0.000059449034,0.00013410849,0.00017654394,0.0001315191,0.000054815966,0.00006335602,0.000067976536,0.000005383556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005340909,0.00016758923,0.008729717,0.00006777862,0.00013609984,0.000009406598,0.00009620555,0.000002086158,0.96266836,0.0022937257,0.00012998008,0.025164947],"study_design_scores_gemma":[0.00048343692,0.00011196926,0.06054774,0.00009832361,0.00020530411,0.000004809792,0.00035524895,0.00006907911,0.9335226,0.00011973306,0.004420102,0.00006167447],"about_ca_topic_score_codex":0.0011759187,"about_ca_topic_score_gemma":0.0002616704,"teacher_disagreement_score":0.051818024,"about_ca_system_score_codex":0.000020742445,"about_ca_system_score_gemma":0.00022360343,"threshold_uncertainty_score":0.24242613},"labels":[],"label_agreement":null},{"id":"W3206649968","doi":"10.3390/v13102046","title":"African Swine Fever Virus A528R Inhibits TLR8 Mediated NF-κB Activity by Targeting p65 Activation and Nuclear Translocation","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"African swine fever virus; Chromosomal translocation; NF-κB; Virology; Biology; Innate immune system; Virus; Nuclear localization sequence; Phosphorylation; Immunity; Signal transduction; Gene; Immune system; Immunology; Cell biology; Genetics","score_opus":0.02792239216544524,"score_gpt":0.22953657326204405,"score_spread":0.20161418109659882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3206649968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961585,0.00032763256,0.00002428817,0.0026761463,0.000035127392,0.000101007965,0.000052582414,0.00008970843,0.0005350434],"genre_scores_gemma":[0.99745435,0.000420389,0.000035109017,0.0017627527,0.00011320227,0.0000071026075,0.00014704795,0.0000018986065,0.00005813079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999061,0.00015387023,0.00015607449,0.00030599357,0.00011529338,0.0002077806],"domain_scores_gemma":[0.99955666,0.00020062314,0.00008267352,0.00003484429,0.000040025363,0.000085201216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017482345,0.00012379407,0.00016475125,0.000010828287,0.00021595109,0.00004329788,0.000072021634,0.00008409309,0.00057313003],"category_scores_gemma":[0.00019037632,0.000059251095,0.000040823317,0.0002662182,0.00005574866,0.000296274,0.000054433476,0.000085836,0.00004799536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055520013,0.00007821533,0.0028737518,0.000007132403,0.000015943928,0.000001432902,0.00006866932,0.0000013342143,0.97262037,0.0001900103,0.005089845,0.018997751],"study_design_scores_gemma":[0.0005180553,0.0001879133,0.3429818,0.00004808127,0.000057371817,0.000001573977,0.0011576567,0.0008294502,0.380707,0.00045828146,0.27245465,0.0005981852],"about_ca_topic_score_codex":0.00055162166,"about_ca_topic_score_gemma":0.00019132486,"teacher_disagreement_score":0.5919134,"about_ca_system_score_codex":0.000018496656,"about_ca_system_score_gemma":0.0000051023526,"threshold_uncertainty_score":0.6275372},"labels":[],"label_agreement":null},{"id":"W3208069677","doi":"10.3390/v13112205","title":"Establishing Healthcare Worker Performance and Safety in Providing Critical Care for Patients in a Simulated Ebola Treatment Unit: Non-Randomized Pilot Study","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Toronto; Island Health; Western University; Université de Sherbrooke; Sunnybrook Health Science Centre; St. Michael's Hospital; University of British Columbia; Health Sciences Centre; Canadian Armed Forces; CARE Canada; Defence Research and Development Canada","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Patient safety; Personal protective equipment; Health care; Emergency medicine; Medical emergency; Nursing; Coronavirus disease 2019 (COVID-19); Internal medicine","score_opus":0.08110118087309476,"score_gpt":0.4004799218121981,"score_spread":0.31937874093910334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208069677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99664116,0.0004607888,0.000014943748,0.00021740625,0.00006613233,0.0024555402,0.000019261563,0.00002003247,0.000104760125],"genre_scores_gemma":[0.99912596,0.00024236145,0.000112726586,0.00016548809,0.00003784652,0.0002156817,0.000033982527,0.000019335379,0.0000466039],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99869484,0.0002010684,0.00034558357,0.00028911306,0.00016535871,0.0003040376],"domain_scores_gemma":[0.998737,0.0007258006,0.00002553323,0.00013895296,0.00026815868,0.00010458541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031485545,0.00013717484,0.00048745173,0.00021637816,0.00015214714,0.00005979525,0.00002828566,0.000046851514,0.00001342177],"category_scores_gemma":[0.00082902424,0.00010518137,0.00003631958,0.00040883204,0.000057393154,0.00020073632,0.000047596383,0.00018135703,0.000001339645],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03219503,0.0020165308,0.9483039,0.00033809277,0.000036137793,0.000049092178,0.0037871357,0.00010008982,0.0002161363,0.000014615899,0.000004455575,0.012938828],"study_design_scores_gemma":[0.36988977,0.015035399,0.58177346,0.0015976428,0.00016384714,0.000008407548,0.015204276,0.012463558,0.0025329709,0.000024210629,0.0009321723,0.00037429514],"about_ca_topic_score_codex":0.0040799906,"about_ca_topic_score_gemma":0.004632948,"teacher_disagreement_score":0.3665304,"about_ca_system_score_codex":0.00024026431,"about_ca_system_score_gemma":0.00020391922,"threshold_uncertainty_score":0.6167752},"labels":[],"label_agreement":null},{"id":"W3209160211","doi":"10.3390/v13112187","title":"Development of a Novel Loop Mediated Isothermal Amplification Assay (LAMP) for the Rapid Detection of Epizootic Haemorrhagic Disease Virus","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Vector-Borne Animal Diseases","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Biotechnology and Biological Sciences Research Council; Department for Environment, Food and Rural Affairs, UK Government","keywords":"Loop-mediated isothermal amplification; Multiplex; Virology; Biology; Virus; Detection limit; Real-time polymerase chain reaction; Epizootic; Molecular biology; Reverse Transcription Loop-mediated Isothermal Amplification; Reverse transcriptase; Polymerase chain reaction; Chemistry; Genetics; Chromatography; Gene; DNA","score_opus":0.07350058447472294,"score_gpt":0.26506044651073457,"score_spread":0.19155986203601164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209160211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967994,0.0012427401,0.001063746,0.00017740602,0.000074246025,0.00030032618,0.00028874763,0.000034789402,0.000018580942],"genre_scores_gemma":[0.9991065,0.000059091075,0.00037345762,0.0002265527,0.000067689885,0.000074393916,0.000067218316,0.0000021022076,0.000022966411],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990648,0.000058582722,0.00030473905,0.00021433673,0.00020123686,0.00015632212],"domain_scores_gemma":[0.9988643,0.0006060554,0.00018322417,0.000083175735,0.00018740694,0.00007584514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019200519,0.0001118311,0.00015239441,0.0000126995465,0.00014117424,0.000021150758,0.00016999111,0.000043190288,0.00025578763],"category_scores_gemma":[0.0005398797,0.000043392254,0.00010408512,0.00031784055,0.000069283575,0.0000893151,0.00004289756,0.000037900823,0.000010081984],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014665576,0.00029207146,0.00086942525,0.000027869297,0.000032982167,5.606729e-7,0.00004362939,0.0000109051625,0.9372755,0.00009136877,0.000018311295,0.061190695],"study_design_scores_gemma":[0.00020258437,0.000066001754,0.50532526,0.000022331062,0.00006250715,7.374495e-7,0.00020115043,0.0005138516,0.4881541,0.000022857148,0.005315325,0.000113291535],"about_ca_topic_score_codex":0.00008453002,"about_ca_topic_score_gemma":0.00066818827,"teacher_disagreement_score":0.50445586,"about_ca_system_score_codex":0.000019981617,"about_ca_system_score_gemma":0.00006383756,"threshold_uncertainty_score":0.28006953},"labels":[],"label_agreement":null},{"id":"W3209563740","doi":"10.3390/v13112146","title":"Respiratory Viruses in Solid Organ Transplant Recipients","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Medicine; Immunology; Population; Respiratory system; Transplantation; Immunogenicity; Intensive care medicine; Virology; Internal medicine; Immune system","score_opus":0.27346919201986647,"score_gpt":0.4895760371614394,"score_spread":0.2161068451415729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209563740","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017662696,0.9945741,0.0000069440166,0.0000071338955,0.00047012963,0.0012805772,0.00014351425,0.00013954521,0.0016117782],"genre_scores_gemma":[0.000049252547,0.9967244,0.000039201423,0.0017576104,0.000480618,0.00034936337,0.000052399864,0.00018918782,0.00035796873],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99541473,0.00082004955,0.0013936186,0.00092054124,0.0007409575,0.00071008946],"domain_scores_gemma":[0.9977474,0.0003557707,0.00025064457,0.0011379597,0.00017870295,0.0003295249],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007391398,0.00065137644,0.0028033108,0.0014901946,0.00012280284,0.000100587495,0.0003657473,0.0007031801,0.0013134894],"category_scores_gemma":[0.0006772697,0.0005323916,0.0005765132,0.001999919,0.0001875767,0.00021841197,0.0001444433,0.0015313138,0.0014442324],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007359608,0.0008033984,0.005783095,0.011185661,0.0005227751,0.0025669846,0.00008959016,0.0000010446072,0.00040203542,0.00010500205,0.004085744,0.9743811],"study_design_scores_gemma":[0.0005765698,0.0003180737,0.00019324812,0.031979978,0.0004415893,0.00012655239,0.000010582757,3.1424975e-7,0.00063177187,0.000003180701,0.96528524,0.00043291136],"about_ca_topic_score_codex":0.0001284477,"about_ca_topic_score_gemma":0.00015193639,"teacher_disagreement_score":0.9739482,"about_ca_system_score_codex":0.0006011558,"about_ca_system_score_gemma":0.0019394123,"threshold_uncertainty_score":0.99971277},"labels":[],"label_agreement":null},{"id":"W3209895852","doi":"10.3390/v13112211","title":"Downregulation of Cell Surface Major Histocompatibility Complex Class I Expression Is Mediated by the Left-End Transcription Unit of Fowl Adenovirus 9","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Krell Institute; Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Major histocompatibility complex; Biology; MHC class I; Antigen presentation; Antigen processing; Virology; Cytotoxic T cell; Immune system; Transporter associated with antigen processing; Cell biology; Antigen; T cell; Immunology; Genetics; In vitro","score_opus":0.048020297592572876,"score_gpt":0.30969105610531517,"score_spread":0.2616707585127423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209895852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960234,0.0023720416,0.0003416485,0.0001693172,0.000037639304,0.00031269717,0.0005224783,0.000010186166,0.0002105918],"genre_scores_gemma":[0.9984155,0.00019338072,0.0002472709,0.0002548155,0.000027692668,0.000007171628,0.00053836463,0.000022904735,0.00029287577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983443,0.0004070358,0.00037177996,0.00032921342,0.0003519628,0.00019572614],"domain_scores_gemma":[0.9988174,0.00006779287,0.00017434788,0.00061460614,0.00026716522,0.00005871443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003281092,0.0001552934,0.00021430447,0.000031132862,0.00008575371,0.000011953008,0.00026020437,0.00014976668,0.00060926075],"category_scores_gemma":[0.000043857035,0.00012573911,0.000106045874,0.00016828356,0.00023558362,0.000009665242,0.000068172856,0.00010946676,0.000009168261],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010284055,0.00022533211,0.0016882838,0.00006391889,0.00003618124,4.2003444e-7,0.00018403205,0.00013482044,0.99260837,0.0000033293475,0.0037099333,0.000316998],"study_design_scores_gemma":[0.0008562392,0.00048282836,0.0045508887,0.000015163868,0.000019708003,0.0000011452674,0.00012572651,0.00016431084,0.9826975,0.000029002009,0.010935796,0.00012171727],"about_ca_topic_score_codex":0.00013125203,"about_ca_topic_score_gemma":0.00031865892,"teacher_disagreement_score":0.009910872,"about_ca_system_score_codex":0.000022359207,"about_ca_system_score_gemma":0.00014447833,"threshold_uncertainty_score":0.66709775},"labels":[],"label_agreement":null},{"id":"W3210547702","doi":"10.3390/v13112196","title":"Mental Health and Substance Use Associated with Hospitalization among People with COVID-19: A Population-Based Cohort Study","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 Impact on Reproduction","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; St. Paul's Hospital; BC Centre for Disease Control; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Coronavirus disease 2019 (COVID-19); Medicine; Substance use; Cohort; Mental health; 2019-20 coronavirus outbreak; Cohort study; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Population; Psychiatry; Environmental health; Virology; Internal medicine; Disease; Outbreak; Infectious disease (medical specialty)","score_opus":0.03302690864673465,"score_gpt":0.3278011277496089,"score_spread":0.29477421910287427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3210547702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951127,0.00013311645,0.0007046468,0.002204633,0.000052976407,0.0015777606,0.000033366836,0.00017612823,0.000004668186],"genre_scores_gemma":[0.9935131,0.000022027843,0.00014967815,0.0057115327,0.000028105704,0.00005603092,0.00038905174,0.00003607979,0.00009436352],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99847066,0.00015260567,0.00022511445,0.00047942705,0.00047297287,0.00019922892],"domain_scores_gemma":[0.99881357,0.00013555758,0.00020971542,0.00035428334,0.00016258414,0.00032427016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002640384,0.00016541284,0.0003262566,0.00011023301,0.00021711644,0.00006868457,0.000026186688,0.00003940925,0.000044349163],"category_scores_gemma":[0.0012138764,0.00013421974,0.00001904766,0.0007019284,0.00004706944,0.00029386382,0.000010286211,0.00008892438,0.0000010336628],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036583067,0.0006070736,0.9961965,0.000060727994,0.00013053905,0.00002860614,0.001883635,0.00034366688,0.00006501814,0.000008812947,0.00027874648,0.00003081086],"study_design_scores_gemma":[0.0028931121,0.0010070575,0.99426705,0.00012746832,0.00010481381,0.000011488262,0.0009634345,0.00022455998,0.00012159802,0.000003005406,0.00012312987,0.00015331326],"about_ca_topic_score_codex":0.01091701,"about_ca_topic_score_gemma":0.040895853,"teacher_disagreement_score":0.029978845,"about_ca_system_score_codex":0.0006464372,"about_ca_system_score_gemma":0.0008609401,"threshold_uncertainty_score":0.99566936},"labels":[],"label_agreement":null},{"id":"W3212594383","doi":"10.1093/oso/9780192845030.003.0004","title":"Twenty-First-Century Pandemics","year":2021,"lang":"en","type":"book-chapter","venue":"Viruses","topic":"COVID-19 Pandemic Impacts","field":"Economics, Econometrics and Finance","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pandemic; Virology; Quarter (Canadian coin); Coronavirus disease 2019 (COVID-19); Human immunodeficiency virus (HIV); Geography; Biology; History; Medicine; Infectious disease (medical specialty); Disease; Archaeology","score_opus":0.07958478315241732,"score_gpt":0.2626573704877833,"score_spread":0.183072587335366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212594383","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007471028,0.054949243,0.00036253178,0.0006444283,0.0032435614,0.00041667817,0.0016319493,0.00023005066,0.9377745],"genre_scores_gemma":[0.014833391,0.07416441,0.0004334482,0.027152518,0.002344988,0.00003843002,0.00033631484,0.0005161213,0.88018036],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99770623,0.000006477477,0.00091202353,0.0008230817,0.000088696914,0.00046345746],"domain_scores_gemma":[0.99792886,0.00022259317,0.0007124187,0.0008913902,0.000047925103,0.00019682573],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003186596,0.00048475305,0.0009437337,0.0004107698,0.00012787356,0.00012685143,0.0004293182,0.00068157905,0.0038899279],"category_scores_gemma":[0.00034917422,0.0006039597,0.00034883336,0.00007499568,0.00010165791,0.00020749701,0.00026841034,0.00061458524,0.0040411684],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020458816,0.000045198565,0.0058389744,0.00017892716,0.00031054,0.000074314834,0.0002093896,0.00002787774,0.000010302357,0.954984,0.036194928,0.0021050759],"study_design_scores_gemma":[0.0003667675,0.00003020226,0.00019331383,0.00016158019,0.000029217737,0.000009766074,0.000007297009,0.000023769471,0.000020611142,0.038985983,0.9595359,0.0006356034],"about_ca_topic_score_codex":0.0002246609,"about_ca_topic_score_gemma":0.00011126809,"teacher_disagreement_score":0.923341,"about_ca_system_score_codex":0.00044308652,"about_ca_system_score_gemma":0.00014252106,"threshold_uncertainty_score":0.9996412},"labels":[],"label_agreement":null},{"id":"W3212635003","doi":"10.3390/v13112239","title":"Lasting Changes to Circulating Leukocytes in People with Mild SARS-CoV-2 Infections","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; St. Joseph’s Healthcare Hamilton; University of British Columbia; University of Toronto; BC Children's Hospital; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Asymptomatic; Immunology; Immune system; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Coronavirus disease 2019 (COVID-19); Phenotype; Inflammation; 2019-20 coronavirus outbreak; Biology; Virology; Internal medicine; Disease; Infectious disease (medical specialty); Outbreak","score_opus":0.04910486304243126,"score_gpt":0.3388242407438396,"score_spread":0.2897193777014083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212635003","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949174,0.000222502,0.00026048144,0.0030632645,0.00010874916,0.00035906263,0.000004725136,0.00015556927,0.00090827723],"genre_scores_gemma":[0.9880127,0.000009962791,0.0015452674,0.010058627,0.00020841874,0.00007348149,0.000007296554,0.000037268524,0.00004700368],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989733,0.000057453355,0.00015984371,0.00030758083,0.00021098198,0.00029082067],"domain_scores_gemma":[0.9989144,0.0005839876,0.000052097086,0.00027407537,0.000089116475,0.00008629334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013593497,0.00015586767,0.00028803223,0.00023613717,0.00009463905,0.000045045606,0.00005553224,0.00005969044,0.000030696112],"category_scores_gemma":[0.0014766072,0.00013735279,0.000036719553,0.0007699551,0.000027901899,0.00012325753,0.000079420286,0.00016957069,0.00006148816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054358126,0.00017814265,0.58881634,0.00037727077,0.000045386496,0.00030566982,0.0012882794,0.00030615844,0.40696916,0.000085927495,0.00038668624,0.001186635],"study_design_scores_gemma":[0.001957181,0.00056366035,0.35245553,0.0014771094,0.000104825886,0.0002630706,0.0003718489,0.00034039063,0.6348292,0.000036605623,0.0072363648,0.0003642064],"about_ca_topic_score_codex":0.0014404035,"about_ca_topic_score_gemma":0.023914924,"teacher_disagreement_score":0.2363608,"about_ca_system_score_codex":0.00014475446,"about_ca_system_score_gemma":0.00022526874,"threshold_uncertainty_score":0.99389607},"labels":[],"label_agreement":null},{"id":"W3212684795","doi":"10.3390/v13112244","title":"From Mosquito Bites to Sexual Transmission: Evaluating Mouse Models of Zika Virus Infection","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"Zika virus; Sexual transmission; Transmission (telecommunications); Virology; Outbreak; Biology; Global health; Immunology; Medicine; Virus; Public health; Pathology","score_opus":0.16025048675386896,"score_gpt":0.42956438577740746,"score_spread":0.2693138990235385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212684795","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0062945294,0.98973525,0.0014138414,0.0000288968,0.00024597117,0.0013284292,0.0007042697,0.000110742876,0.0001380974],"genre_scores_gemma":[0.00017580007,0.9962612,0.000727191,0.0004910054,0.0010698092,0.00031171401,0.0004294632,0.00012505472,0.00040876205],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968312,0.00028926163,0.0010689723,0.000787734,0.0006779965,0.00034482992],"domain_scores_gemma":[0.99785984,0.0003275113,0.00037340177,0.00081101677,0.00024156763,0.00038665955],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002759859,0.00054536556,0.002662397,0.00028147016,0.0000799417,0.00005517405,0.00018751617,0.0003612228,0.0009280906],"category_scores_gemma":[0.00025503305,0.00043280853,0.000722704,0.0005240177,0.000035504883,0.00014415976,0.00009775753,0.00033742795,0.000071270224],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098222125,0.0003154495,0.000015418316,0.0069393716,0.0005950826,0.000029525861,0.00016165861,0.00015703226,0.002429003,0.000034422963,0.0012809597,0.9879438],"study_design_scores_gemma":[0.0010209538,0.000708742,0.000011161362,0.020433087,0.0073311087,0.000015040722,0.000083978724,0.0010571463,0.00084552413,0.00005570505,0.96784,0.000597521],"about_ca_topic_score_codex":0.0025212453,"about_ca_topic_score_gemma":0.000041473246,"teacher_disagreement_score":0.98734635,"about_ca_system_score_codex":0.00010866825,"about_ca_system_score_gemma":0.00079592294,"threshold_uncertainty_score":0.9999852},"labels":[],"label_agreement":null},{"id":"W3213123536","doi":"10.3390/v13112252","title":"Trans-Activator Binding Site Context in RCNMV Modulates Subgenomic mRNA Transcription","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario","keywords":"Subgenomic mRNA; Transcription (linguistics); RNA; Messenger RNA; Biology; Molecular biology; Capsid; Activator (genetics); Binding site; Cell biology; Genetics; Gene","score_opus":0.07292698474714375,"score_gpt":0.2710897918133217,"score_spread":0.19816280706617795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3213123536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99599606,0.0023921623,0.0000019571587,0.000606094,0.00006854869,0.00012835844,0.0005602112,0.000051865012,0.00019477228],"genre_scores_gemma":[0.9977338,0.0016352162,0.000020552243,0.00027861213,0.00007946627,0.00001789697,0.000083753024,0.0000012706103,0.0001494724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989028,0.00011072466,0.00018656813,0.0002834846,0.000182043,0.00033440205],"domain_scores_gemma":[0.9996168,0.0002081824,0.000030635783,0.000039529106,0.000034812365,0.00007003034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001442757,0.00012997817,0.00020356834,0.000025306868,0.00015693795,0.000072302144,0.00012540173,0.00006629091,0.0004825463],"category_scores_gemma":[0.000046181838,0.000056320332,0.000073882315,0.00036738525,0.000053354313,0.00024746745,0.000029029976,0.00013601813,0.00011009268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004758111,0.000062455634,0.009866427,0.0000069764174,0.00001620821,0.000034022254,0.0002009925,0.0000035968833,0.96276164,0.00002324165,0.0002989338,0.026677916],"study_design_scores_gemma":[0.0002868589,0.00008164926,0.15816611,0.00006080419,0.000007346642,0.0000069843945,0.0005171569,0.00007977355,0.71947247,0.000089392444,0.12098905,0.00024242859],"about_ca_topic_score_codex":0.0011450818,"about_ca_topic_score_gemma":0.00475263,"teacher_disagreement_score":0.24328919,"about_ca_system_score_codex":0.000049925005,"about_ca_system_score_gemma":0.000012873918,"threshold_uncertainty_score":0.5283544},"labels":[],"label_agreement":null},{"id":"W3213322027","doi":"10.3390/v13112236","title":"HIV-1 Envelope Glycoproteins Proteolytic Cleavage Protects Infected Cells from ADCC Mediated by Plasma from Infected Individuals","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Furin; Antibody-dependent cell-mediated cytotoxicity; Glycoprotein; Cleavage (geology); Epitope; Cell biology; Endoplasmic reticulum; Endocytic cycle; Chemistry; Viral envelope; Neutralizing antibody; Virology; Antibody; Biology; Virus; Molecular biology; Endocytosis; In vitro; Cell; Cytotoxicity; Biochemistry; Immunology","score_opus":0.01666439313829825,"score_gpt":0.24215498316546658,"score_spread":0.22549059002716831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3213322027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9819043,0.0025250553,0.00007232938,0.00020922163,0.00026155138,0.0016787783,0.012447274,0.0003813434,0.00052009785],"genre_scores_gemma":[0.9849049,0.00026383167,0.00045142573,0.00037788125,0.000064797074,0.00070718507,0.012062991,0.00006844718,0.0010985333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968729,0.00083103514,0.0004966267,0.0008001852,0.00017363127,0.0008256233],"domain_scores_gemma":[0.99810904,0.00075559056,0.00019585497,0.000649411,0.0001427583,0.00014736863],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013299065,0.00045785072,0.00059337803,0.0001558373,0.00030356395,0.000101597885,0.0003482164,0.0005721141,0.0066105933],"category_scores_gemma":[0.00080947665,0.00039545877,0.00011652843,0.0005090636,0.00025875514,0.00022104039,0.00031982065,0.0007118691,0.023675663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023178125,0.0007706239,0.021514824,0.000017287275,0.0010871943,0.0001791598,0.00040123664,9.721439e-7,0.9502094,0.000008462776,0.023048855,0.002530219],"study_design_scores_gemma":[0.0043017976,0.0002900281,0.024788696,0.00009766832,0.00007266719,0.0000074909512,0.00005733485,0.000001728108,0.85827065,0.00006965203,0.11167986,0.00036245518],"about_ca_topic_score_codex":0.0034409044,"about_ca_topic_score_gemma":0.00047034316,"teacher_disagreement_score":0.091938764,"about_ca_system_score_codex":0.00011677512,"about_ca_system_score_gemma":0.0005056102,"threshold_uncertainty_score":0.99984974},"labels":[],"label_agreement":null},{"id":"W3213654771","doi":"10.3390/v13112241","title":"Phage Cocktail Development against Aeromonas salmonicida subsp. salmonicida Strains Is Compromised by a Prophage","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aeromonas salmonicida; Prophage; Microbiology; Biology; Bacteriophage; Vibrionaceae; Virology; Aeromonas; Genetics; Bacteria; Gene; Escherichia coli","score_opus":0.017983888630523994,"score_gpt":0.2480803195067965,"score_spread":0.2300964308762725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3213654771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99030894,0.0003733139,0.000121857665,0.0002538319,0.0002585902,0.00030320388,0.0001673899,0.00012402788,0.008088873],"genre_scores_gemma":[0.98798484,0.000104612234,0.001945721,0.004070472,0.00004333534,0.000052392814,0.00010842054,0.00005135855,0.0056388285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998049,0.00007525847,0.00043745764,0.00062629883,0.00028238175,0.00052956195],"domain_scores_gemma":[0.999173,0.000036211393,0.00014153824,0.00041874647,0.00002471767,0.00020578096],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001067746,0.00031955808,0.00029113502,0.000031908665,0.0003604471,0.00016300533,0.00032190455,0.0001170522,0.011653513],"category_scores_gemma":[0.000021754799,0.0003114747,0.000115482566,0.000303442,0.00015204019,0.000413221,0.0003174094,0.0002616982,0.0026276046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016983073,0.00039796185,0.0009794334,0.000013645226,0.000050374016,0.00011352108,0.0008177282,0.000014094116,0.96946424,0.000005032646,0.019397423,0.0087295845],"study_design_scores_gemma":[0.0005307384,0.00003652413,0.019589728,0.00003391485,0.000018546518,0.000027140253,0.00017205419,0.000033408804,0.7079317,0.0000060558395,0.27127892,0.00034129128],"about_ca_topic_score_codex":0.00046148768,"about_ca_topic_score_gemma":0.0006652432,"teacher_disagreement_score":0.26153252,"about_ca_system_score_codex":0.00042332764,"about_ca_system_score_gemma":0.00010002913,"threshold_uncertainty_score":0.9999337},"labels":[],"label_agreement":null},{"id":"W3214576010","doi":"10.3390/v13112231","title":"Cross-Strain Neutralizing and Protective Monoclonal Antibodies against EEEV or WEEV","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"Defense Threat Reduction Agency","keywords":"Alphavirus; Virology; Biology; Togaviridae; Neutralization; Monoclonal antibody; Antibody; Virus; Immunology","score_opus":0.043982685525947314,"score_gpt":0.3458918271148705,"score_spread":0.3019091415889232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3214576010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938241,0.003789449,0.000056405454,0.0005089433,0.00009319853,0.00033913212,0.00020083576,0.000079473175,0.0011084552],"genre_scores_gemma":[0.9946427,0.0003317539,0.0002819212,0.0033831254,0.00029576352,0.000054901946,0.00002543388,0.000025830674,0.0009586125],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990107,0.000040201987,0.00019340518,0.00033464114,0.00016378946,0.00025727958],"domain_scores_gemma":[0.9993975,0.0000675778,0.000052097195,0.0002078531,0.00011806463,0.00015686195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000766619,0.00016005372,0.00027984555,0.000044872584,0.00013799203,0.00010559889,0.00004736621,0.00006779318,0.00028155162],"category_scores_gemma":[0.00020043977,0.0001221912,0.0000897481,0.00012230959,0.00011675439,0.00013628673,0.000052187315,0.00013571522,0.000018728813],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028674142,0.00053948956,0.32196423,0.0007570066,0.0006977103,0.0030475014,0.0012124085,0.00003257752,0.56829983,0.0026003227,0.0011373099,0.09684418],"study_design_scores_gemma":[0.0050246767,0.00041996807,0.8763011,0.00047194256,0.0002811775,0.0001901343,0.0014456863,0.00047297613,0.075522654,0.000372994,0.039010752,0.00048594765],"about_ca_topic_score_codex":0.000060193383,"about_ca_topic_score_gemma":0.000046092762,"teacher_disagreement_score":0.55433685,"about_ca_system_score_codex":0.00002164768,"about_ca_system_score_gemma":0.00019773285,"threshold_uncertainty_score":0.49828127},"labels":[],"label_agreement":null},{"id":"W3215076654","doi":"10.3390/v13122371","title":"A Rapid Point-of-Care Test for the Serodiagnosis of Hepatitis Delta Virus Infection","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Deutsches Zentrum für Infektionsforschung","keywords":"Hepatitis D virus; Virology; Medicine; Hepatitis D; HEPATITIS DELTA; Gold standard (test); Hepatitis B virus; Epidemiology; Hepatitis B; Immunology; Virus; Internal medicine; HBsAg","score_opus":0.044021177036265326,"score_gpt":0.3093346289672664,"score_spread":0.26531345193100103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215076654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9825929,0.013371777,0.00040583705,0.0008265052,0.00040776771,0.0007653378,0.00077247445,0.00006452442,0.0007928736],"genre_scores_gemma":[0.9734024,0.024323056,0.00076804153,0.0010690532,0.00015705744,0.0001867473,0.000027360002,0.000028125964,0.000038154358],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990272,0.00004457116,0.00035016757,0.00019653246,0.0002072108,0.00017433903],"domain_scores_gemma":[0.9973906,0.0014453483,0.0001444204,0.0003584524,0.000617823,0.000043350312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013076304,0.00013470306,0.0003817564,0.00007539285,0.00012277166,0.000009663697,0.00006261352,0.00006868718,0.00032057936],"category_scores_gemma":[0.0029063802,0.00010072851,0.00017620288,0.00031110385,0.00016825886,0.00008600425,0.00007605594,0.00008574955,0.000014663334],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000661717,0.00022837742,0.94369817,0.0004944327,0.00022975258,0.0000094199095,0.00096539466,0.0000046396212,0.020879911,0.00017652301,0.007623773,0.025623454],"study_design_scores_gemma":[0.0008238892,0.0007281071,0.42898002,0.00032672158,0.00037101883,0.000011130872,0.00019949427,0.000043366443,0.5280553,0.00008215404,0.0402673,0.00011147522],"about_ca_topic_score_codex":0.00910611,"about_ca_topic_score_gemma":0.018574407,"teacher_disagreement_score":0.5147181,"about_ca_system_score_codex":0.00004762385,"about_ca_system_score_gemma":0.00013626464,"threshold_uncertainty_score":0.99933404},"labels":[],"label_agreement":null},{"id":"W3215991310","doi":"10.3390/v13112323","title":"Heterogeneity of Early Host Response to Infection with Four Low-Pathogenic H7 Viruses with a Different Evolutionary History in the Field","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Biology; Influenza A virus subtype H5N1; Host (biology); Highly pathogenic; Virology; Pathogenicity; Transcriptome; Viral evolution; Strain (injury); Virus; Inoculation; Gene; Zoology; Genetics; Microbiology; Gene expression; Genome; Immunology","score_opus":0.08168388440311997,"score_gpt":0.34572821397703796,"score_spread":0.264044329573918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215991310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99665934,0.0019453042,0.000062060266,0.00054300175,0.00005658295,0.000514695,0.00002485075,0.000034639754,0.00015951731],"genre_scores_gemma":[0.99343145,0.00013979858,0.00018745165,0.0058988156,0.00006244251,0.00016056384,0.0000016802103,0.000023138611,0.00009465187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980435,0.00047007352,0.00025687317,0.00030938652,0.0006163598,0.0003038401],"domain_scores_gemma":[0.9983627,0.00071946555,0.00007617026,0.0005064591,0.00024451947,0.000090693014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003527931,0.00019593586,0.00033688897,0.0002485982,0.000086657186,0.000012497673,0.000111539426,0.000069356916,0.00007657791],"category_scores_gemma":[0.00095104065,0.00011638318,0.00007675792,0.00041708758,0.00014841974,0.000113288566,0.000103898994,0.00028352952,0.000020809768],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019059122,0.00055649487,0.74897015,0.00015383138,0.00019440198,0.00043026835,0.0015087656,0.000030395653,0.22700936,0.000032129818,0.0018000116,0.0002550726],"study_design_scores_gemma":[0.0012969992,0.0026548654,0.9275409,0.00034300165,0.00006311284,0.000068247675,0.000138011,0.0000047730946,0.0539608,0.000004679868,0.01378148,0.00014313954],"about_ca_topic_score_codex":0.0010392682,"about_ca_topic_score_gemma":0.0025706063,"teacher_disagreement_score":0.17857075,"about_ca_system_score_codex":0.0003500044,"about_ca_system_score_gemma":0.00037699364,"threshold_uncertainty_score":0.4745968},"labels":[],"label_agreement":null},{"id":"W3216059947","doi":"10.3390/v13112318","title":"The Roles of Neutrophils in Cytokine Storms","year":2021,"lang":"en","type":"review","venue":"Viruses","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Cytokine storm; Cytokine; Immunology; Inflammation; Context (archaeology); Innate immune system; Biology; Medicine; Immune system; Disease; Infectious disease (medical specialty); Pathology","score_opus":0.055794193815557336,"score_gpt":0.323663785908827,"score_spread":0.26786959209326966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3216059947","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005820072,0.9980204,0.000004469416,0.000024174582,0.0005944641,0.00038491897,0.00018524147,0.000025035522,0.00017928718],"genre_scores_gemma":[0.00015119913,0.9988887,0.000012295465,0.000088573186,0.00006359569,0.000093427065,0.00012204578,0.000044839195,0.00053532515],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99780047,0.00063973985,0.00073936203,0.00039061086,0.00004808263,0.00038175433],"domain_scores_gemma":[0.9983896,0.0005403874,0.00039070315,0.0006007097,0.00006212754,0.000016447519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030342682,0.00039429887,0.0016464185,0.00019632357,0.0001322976,0.000019937053,0.00056281575,0.0004167393,0.00022469969],"category_scores_gemma":[0.00009318223,0.00022461815,0.00037471927,0.00037578223,0.00023863399,0.000063598956,0.00023990833,0.00059186877,0.0003258384],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002636966,0.000102868056,0.0000041216954,0.0011600804,0.00050507596,0.00005264669,0.00007490795,3.3610587e-7,0.027970057,0.011419661,0.0010625749,0.9576213],"study_design_scores_gemma":[0.00024075525,0.00008558128,0.0000032326132,0.0035197646,0.00018645704,0.00003799926,0.000066837194,9.325414e-9,0.02721814,0.00007742382,0.9683421,0.00022167114],"about_ca_topic_score_codex":0.00003904625,"about_ca_topic_score_gemma":0.0001328748,"teacher_disagreement_score":0.96727955,"about_ca_system_score_codex":0.00005380295,"about_ca_system_score_gemma":0.00023064698,"threshold_uncertainty_score":0.9159663},"labels":[],"label_agreement":null},{"id":"W3217180129","doi":"10.3390/v13122346","title":"Comparative Susceptibility of Madin–Darby Canine Kidney (MDCK) Derived Cell Lines for Isolation of Swine Origin Influenza A Viruses from Different Clinical Specimens","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Shared Health; University of Saskatchewan; University of Guelph; Agriculture Food and Rural Development; Canadian Food Inspection Agency","funders":"Public Health Agency; Public Health Agency of Canada; Canadian Food Inspection Agency","keywords":"Cell culture; Biology; Virology; Isolation (microbiology); Virus; Influenza A virus; Lung; Kidney; Cell; Microbiology; Medicine; Internal medicine","score_opus":0.29909559348544035,"score_gpt":0.47707492221385145,"score_spread":0.1779793287284111,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217180129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939933,0.0017871571,0.00052158587,0.00015920594,0.0002544476,0.0010239074,0.0018902614,0.000053684504,0.00031648407],"genre_scores_gemma":[0.99118084,0.0003692,0.0055203536,0.0020492326,0.00051055505,0.00006748376,0.0001386531,0.000040172737,0.00012349656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966341,0.00029892946,0.0014772321,0.00061370066,0.0005563244,0.00041968806],"domain_scores_gemma":[0.99551225,0.0017812325,0.0005081486,0.0006970146,0.0011901095,0.00031127527],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004019916,0.00036352573,0.0015810055,0.00015936239,0.00010418964,0.000018634531,0.00017974652,0.00018205037,0.00065404014],"category_scores_gemma":[0.0025607848,0.00029118877,0.00036005172,0.00031788356,0.0005270405,0.00014770216,0.00022271283,0.00031905124,0.000025328074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002640755,0.0011225294,0.35960802,0.0003265669,0.000498093,0.0000073255474,0.0006930394,0.000018980767,0.63135254,0.00005775487,0.003556989,0.000117383526],"study_design_scores_gemma":[0.005066625,0.0011285472,0.2552125,0.0002529638,0.0003086314,8.2669305e-7,0.00046824533,0.00030436175,0.72466433,0.0001559822,0.012225853,0.00021115642],"about_ca_topic_score_codex":0.0010569906,"about_ca_topic_score_gemma":0.0011763448,"teacher_disagreement_score":0.10439555,"about_ca_system_score_codex":0.00012842382,"about_ca_system_score_gemma":0.00057499734,"threshold_uncertainty_score":0.99995404},"labels":[],"label_agreement":null},{"id":"W3217330276","doi":"10.3390/v13112321","title":"Cytomegalovirus Immunity, Inflammation and Cognitive Abilities in the Elderly","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Newfoundland and Labrador Centre for Applied Health Research","keywords":"Cognition; Inflammation; Immunology; Cytomegalovirus; Cognitive decline; Medicine; Immunity; Cognitive skill; Immune system; Internal medicine; Herpesviridae; Dementia; Psychiatry; Viral disease; Virus; Disease","score_opus":0.048238512034966576,"score_gpt":0.33873878474117014,"score_spread":0.29050027270620354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217330276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98583996,0.0026786118,0.000010003653,0.0013327661,0.00003398597,0.00033544225,0.000025747335,0.00003021266,0.009713273],"genre_scores_gemma":[0.99766636,0.0007509046,0.00005087551,0.0009623324,0.00013445434,0.000055433244,0.000022774659,0.0000158927,0.00034097786],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9986885,0.00022718411,0.00025286435,0.00021873176,0.00035028462,0.0002624313],"domain_scores_gemma":[0.998786,0.00066844013,0.0000371244,0.00026706737,0.00017217654,0.00006919685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000530993,0.00013069903,0.00023366547,0.0001697221,0.00013983855,0.00013006061,0.000086124805,0.0000866602,0.000357117],"category_scores_gemma":[0.00061882706,0.00009426442,0.000052187348,0.00043490826,0.00020461183,0.00022275627,0.000093685434,0.00039582694,0.00010373698],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019003454,0.0009961831,0.26691166,0.00080607634,0.00036116448,0.0015869616,0.021314453,0.0000033611027,0.20515233,0.010642052,0.0015661737,0.48875925],"study_design_scores_gemma":[0.005868319,0.0012279203,0.6665511,0.000603871,0.00018879118,0.0005940257,0.025172098,0.000097670854,0.1647524,0.0035741841,0.13085067,0.00051895034],"about_ca_topic_score_codex":0.00092554296,"about_ca_topic_score_gemma":0.0011339263,"teacher_disagreement_score":0.4882403,"about_ca_system_score_codex":0.000039101305,"about_ca_system_score_gemma":0.00021638378,"threshold_uncertainty_score":0.3910181},"labels":[],"label_agreement":null},{"id":"W33182496","doi":"10.3390/v12111281","title":"Cabo e radio frequência em sistemas deteção de incêndio","year":2013,"lang":"en","type":"article","venue":"Viruses","topic":"Precipitation Measurement and Analysis","field":"Earth and Planetary Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Computer science; Remote sensing; Geography","score_opus":0.033132375858911454,"score_gpt":0.22687853872381183,"score_spread":0.19374616286490037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W33182496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924265,0.0010387566,0.00026259557,0.0001130659,0.00013824369,0.00010018239,0.000018631017,0.00007103558,0.00583098],"genre_scores_gemma":[0.99726284,0.000050190996,0.0010561921,0.0009973994,0.00013907399,0.0000032397163,0.000021503702,0.0000031416043,0.0004664479],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990805,0.00009072165,0.0001750386,0.00015952752,0.00025003523,0.00024419592],"domain_scores_gemma":[0.9995154,0.00009167111,0.00006379155,0.0001501888,0.00004786798,0.0001310643],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00024866717,0.00010142598,0.00013531809,0.000093722745,0.00014094464,0.00013572101,0.00018304355,0.000045873385,0.009579828],"category_scores_gemma":[0.00008791586,0.000081096034,0.00006776483,0.00021629874,0.00002959028,0.00040489394,0.0000052470664,0.000068206915,0.0036024011],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003853755,0.000008387897,0.9690628,0.000009549633,0.000032307962,0.0000027569276,0.00029514582,0.00034261838,0.0013733837,0.000021903421,0.004230715,0.024616543],"study_design_scores_gemma":[0.00015109763,0.000034932746,0.98721135,0.000014064705,0.000039305665,0.0000022585482,0.00032148638,0.0026576258,0.0016414424,0.00070130243,0.0070498413,0.00017527943],"about_ca_topic_score_codex":0.0043506734,"about_ca_topic_score_gemma":0.006253102,"teacher_disagreement_score":0.024441265,"about_ca_system_score_codex":0.0000067979818,"about_ca_system_score_gemma":0.000040069557,"threshold_uncertainty_score":0.9971734},"labels":[],"label_agreement":null},{"id":"W37376574","doi":"10.3390/v15061274","title":"シンポジウム 患者家族の退院後に生活をイメージして関わる急性期看護病棟看護師に期待すること (看護教育研究学会 第3回学術研究報告)","year":2009,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Computer science","score_opus":0.08300201883848338,"score_gpt":0.39792503405932633,"score_spread":0.314923015220843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W37376574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9417886,0.001606426,0.0001183018,0.001375847,0.0002115982,0.00042101656,0.000010834131,0.0003805181,0.05408682],"genre_scores_gemma":[0.69003105,0.000017397702,0.00033759448,0.30874464,0.0005899022,0.000017813485,0.0000022092033,0.00003355389,0.00022581655],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979908,0.000050852366,0.00030965722,0.00042857314,0.0006273513,0.0005928027],"domain_scores_gemma":[0.998963,0.000110246,0.000058120553,0.0006322669,0.00013252921,0.00010381628],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002662691,0.00024265314,0.00037552955,0.00028400545,0.00012590218,0.00006751105,0.00025795927,0.00015910518,0.00014472674],"category_scores_gemma":[0.00028883846,0.00020065742,0.00016568037,0.0005027936,0.00011221321,0.00018981751,0.00006038002,0.00036378365,0.0019285859],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009955737,0.0009841471,0.08389469,0.00011071453,0.00014859412,0.0008147302,0.00042450547,8.0423206e-7,0.77175736,0.0036841384,0.04336442,0.093820326],"study_design_scores_gemma":[0.0012632997,0.00057623035,0.02003712,0.00006951137,0.000041409465,0.0000745389,0.00006270275,0.00005186429,0.30271906,0.0008752569,0.67401296,0.00021606009],"about_ca_topic_score_codex":0.00014673616,"about_ca_topic_score_gemma":0.0000147077235,"teacher_disagreement_score":0.63064855,"about_ca_system_score_codex":0.00009851866,"about_ca_system_score_gemma":0.0002563038,"threshold_uncertainty_score":0.99884856},"labels":[],"label_agreement":null},{"id":"W4200038443","doi":"10.3390/v13122541","title":"LABRADOR—A Computational Workflow for Virus Detection in High-Throughput Sequencing Data","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pipeline (software); Workflow; Computational biology; Computer science; Contig; Throughput; Data mining; Biology; Database; Genome; Genetics; Gene; Operating system","score_opus":0.0546754048881747,"score_gpt":0.29890504285809594,"score_spread":0.24422963796992125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200038443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9789244,0.000047958656,0.019796614,0.00016504903,0.00044235674,0.0001299463,0.0002571305,0.000036033805,0.0002004905],"genre_scores_gemma":[0.98016465,0.000021584232,0.018487314,0.00094730215,0.00008352234,0.000014837903,0.00011742662,0.000013092009,0.00015030125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928665,0.00003032203,0.00015807115,0.00030153577,0.00007206842,0.00015134351],"domain_scores_gemma":[0.9995874,0.0000899939,0.000043555512,0.00024005107,0.000008929533,0.000030063973],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008578334,0.00007749107,0.00008847572,0.000022145918,0.00010398882,0.000055227163,0.00014429762,0.000041644686,0.0011360755],"category_scores_gemma":[0.00005155114,0.0000820211,0.0000227772,0.00018781298,0.000038581078,0.0005634327,0.00020065195,0.00008127833,0.00021998433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018205918,0.000058764224,0.0003347381,0.0000056352856,0.000008838843,0.000010998237,0.000104640116,0.0057270564,0.9618239,0.000049571998,0.0012391336,0.030618565],"study_design_scores_gemma":[0.001289671,0.00008684046,0.115633994,0.000089170426,0.000044252596,0.00008915113,0.00028303292,0.018247275,0.70695746,0.0033761042,0.1533429,0.0005601237],"about_ca_topic_score_codex":0.0036374633,"about_ca_topic_score_gemma":0.013759977,"teacher_disagreement_score":0.25486636,"about_ca_system_score_codex":0.00018371227,"about_ca_system_score_gemma":0.000023966224,"threshold_uncertainty_score":0.999777},"labels":[],"label_agreement":null},{"id":"W4200042741","doi":"10.3390/v13122488","title":"Pathogenicity of the Canadian Delmarva (DMV/1639) Infectious Bronchitis Virus (IBV) on Female Reproductive Tract of Chickens","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; University of Calgary","funders":"Egg Farmers of Canada; Agriculture and Agri-Food Canada; Canadian Poultry Research Council","keywords":"Infectious bronchitis virus; Avian infectious bronchitis virus; Biology; Reproductive tract; Virology; Pathogenicity; Bronchitis; Virus; Veterinary medicine; Microbiology; Coronavirus disease 2019 (COVID-19); Medicine; Internal medicine; Infectious disease (medical specialty); Ecology","score_opus":0.040355236204273975,"score_gpt":0.2419765231093021,"score_spread":0.20162128690502812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200042741","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904628,0.0003273987,3.5118893e-7,0.000311089,0.0002476584,0.00016629066,0.00045790742,0.000028484541,0.007998039],"genre_scores_gemma":[0.9991133,0.00013752953,0.000013630201,0.00041261927,0.00016752986,0.00001154756,0.000005415166,0.0000018470047,0.00013653192],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987925,0.00015866643,0.00026222254,0.00033911093,0.00020810674,0.0002393697],"domain_scores_gemma":[0.9991891,0.0001935737,0.00016880078,0.00016844038,0.00021048755,0.000069634334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001680526,0.00014672594,0.0002535465,0.000021493357,0.0004815345,0.00001916963,0.00017589463,0.00009294402,0.00034822623],"category_scores_gemma":[0.00059681037,0.000058250534,0.00018170399,0.00058656326,0.00024739755,0.00007563007,0.00009749103,0.00017918325,0.000027330096],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030723837,0.00042462195,0.35535577,0.000012625716,0.00009768844,0.000011185023,0.0003752231,0.000035650075,0.6308959,0.0018625007,0.0006582602,0.01023982],"study_design_scores_gemma":[0.00005711456,0.00022389596,0.7114243,0.00002442682,0.000025445925,0.00001614472,0.00021360633,9.29191e-7,0.2763809,0.00021691785,0.011309819,0.000106526284],"about_ca_topic_score_codex":0.22584428,"about_ca_topic_score_gemma":0.78869015,"teacher_disagreement_score":0.5628459,"about_ca_system_score_codex":0.00008815909,"about_ca_system_score_gemma":0.000084095314,"threshold_uncertainty_score":0.7793109},"labels":[],"label_agreement":null},{"id":"W4200081299","doi":"10.3390/v13122450","title":"Modelling Mutation in Equine Infectious Anemia Virus Infection Suggests a Path to Viral Clearance with Repeated Vaccination","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Equine infectious anemia; Virology; Virus; Vaccination; Context (archaeology); Antibody; Biology; Mutant; Heterologous; Wild type; Immunology; Genetics; Gene","score_opus":0.01983441893718052,"score_gpt":0.2825049342573352,"score_spread":0.2626705153201547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200081299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99470186,0.0005208584,0.0039017498,0.00005434791,0.00009595768,0.0002674118,0.00002926525,0.00009375222,0.00033478992],"genre_scores_gemma":[0.9990237,0.00019487481,0.00012959128,0.00011739502,0.000014056987,0.00007772167,0.00020729714,0.000015347672,0.00022003558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999018,0.00017929163,0.00018155474,0.00029457005,0.000051924177,0.00027463143],"domain_scores_gemma":[0.99957776,0.0000570971,0.000049599425,0.00016233712,0.00012455243,0.000028625573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011971314,0.00012630738,0.000156856,0.00018404254,0.00011167392,0.0000280401,0.000037688522,0.00010964096,0.00017678953],"category_scores_gemma":[0.0000718233,0.00011102115,0.00002535898,0.0004185722,0.000018311057,0.00019099019,0.000029291925,0.00018540687,0.0006037901],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00265249,0.0013400335,0.16970561,0.000114121314,0.00023850503,0.0007609925,0.0018440388,0.12044623,0.6607728,0.0002987705,0.00047124727,0.04135518],"study_design_scores_gemma":[0.0077195014,0.0032834488,0.25251552,0.00024806155,0.00006161011,0.0003188975,0.000111815614,0.0013222354,0.7289841,0.00026656658,0.0046208357,0.00054738094],"about_ca_topic_score_codex":0.00327112,"about_ca_topic_score_gemma":0.003516096,"teacher_disagreement_score":0.11912399,"about_ca_system_score_codex":0.0001456346,"about_ca_system_score_gemma":0.00008867578,"threshold_uncertainty_score":0.7760702},"labels":[],"label_agreement":null},{"id":"W4200153090","doi":"10.3390/v13122464","title":"Metatranscriptomic Sequencing Suggests the Presence of Novel RNA Viruses in Rice Transmitted by Brown Planthopper","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Natural Science Foundation of China","keywords":"Brown planthopper; Biology; Deep sequencing; Backcrossing; Virus; Virology; Genetics; Plant virus; Gene; Genome","score_opus":0.07731405646719451,"score_gpt":0.28661626631849974,"score_spread":0.2093022098513052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200153090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918987,0.0049147424,0.000010102662,0.0008053438,0.000074067284,0.00019702183,0.0017142947,0.000038660484,0.00034702738],"genre_scores_gemma":[0.99690306,0.0018917822,0.00006663472,0.0009272194,0.00004998873,0.000030001762,0.000026215248,0.0000018692408,0.000103205806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826944,0.00021054427,0.00032715913,0.00034245168,0.0004273903,0.00042299525],"domain_scores_gemma":[0.99826926,0.0014075072,0.000075574084,0.00009795921,0.00008383526,0.000065850036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003606582,0.00018025085,0.00030156336,0.000022003533,0.00017472001,0.00005501305,0.00044581483,0.00007370568,0.00014213973],"category_scores_gemma":[0.0003114396,0.000063610925,0.000095384385,0.0007090909,0.00021061966,0.00024346566,0.000079671736,0.00023314849,0.000012796784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055993656,0.000114473514,0.0019994706,0.000020679061,0.000043463777,0.000018271781,0.0002862786,0.000016329242,0.9936129,0.000055780696,0.0024860783,0.001290278],"study_design_scores_gemma":[0.0002806271,0.000060618488,0.023322795,0.00008700614,0.00001990641,0.000013740914,0.00082878856,0.0000856334,0.9565085,0.00005265758,0.018545864,0.00019387114],"about_ca_topic_score_codex":0.0039846054,"about_ca_topic_score_gemma":0.0054997527,"teacher_disagreement_score":0.03710441,"about_ca_system_score_codex":0.000034355016,"about_ca_system_score_gemma":0.000046421264,"threshold_uncertainty_score":0.6023558},"labels":[],"label_agreement":null},{"id":"W4200450823","doi":"10.3390/v14010005","title":"SARS-CoV-2 Spike Expression at the Surface of Infected Primary Human Airway Epithelial Cells","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Serology; Biology; Glycoprotein; Antigenicity; Antibody; Recombinant DNA; Virology; Context (archaeology); Spike (software development); Virus; Molecular biology; Immunology; Gene; Genetics","score_opus":0.05769305668823361,"score_gpt":0.3538434053196473,"score_spread":0.2961503486314137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200450823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99332905,0.00093918445,0.000022852872,0.00012670655,0.00017378804,0.00031436453,0.000049223076,0.000073355426,0.004971496],"genre_scores_gemma":[0.9650512,0.000031491578,0.00012047642,0.034193758,0.00020867295,0.000014721564,0.000011390103,0.000048957438,0.00031934815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981776,0.00018987054,0.00033637235,0.00034896945,0.00060786976,0.00033935512],"domain_scores_gemma":[0.9986298,0.00029197455,0.00010750639,0.00072791334,0.00021351193,0.000029285455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028897592,0.0001900611,0.00036958474,0.000073919175,0.00017607083,0.000027225828,0.00020668357,0.00013659627,0.00012335551],"category_scores_gemma":[0.00016464491,0.00012662841,0.0001578542,0.00037314635,0.00023032195,0.00009234326,0.00036353787,0.0002880686,0.00027804213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023686337,0.00026490298,0.019244725,0.0001575521,0.000042956268,0.00008726069,0.0002431591,9.387469e-7,0.9729148,0.000024053428,0.0062708575,0.0005118998],"study_design_scores_gemma":[0.0009980174,0.0001481468,0.0035958255,0.00011418166,0.000036402485,0.000011862388,0.00003952601,0.000005336281,0.8073478,0.00003275663,0.18756057,0.000109583016],"about_ca_topic_score_codex":0.0003778625,"about_ca_topic_score_gemma":0.00013137634,"teacher_disagreement_score":0.18128972,"about_ca_system_score_codex":0.00010903193,"about_ca_system_score_gemma":0.00032501336,"threshold_uncertainty_score":0.51637566},"labels":[],"label_agreement":null},{"id":"W4205386084","doi":"10.3390/v14010112","title":"The Regulatory Microenvironment in Feathers of Chickens Infected with Very Virulent Marek’s Disease Virus","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Feather; Virulence; Marek's disease; Virology; Virus; Biology; Disease; Medicine; Gene; Genetics; Zoology; Internal medicine","score_opus":0.011707931799959312,"score_gpt":0.2389869994841121,"score_spread":0.2272790676841528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205386084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975779,0.0010272182,0.000004882314,0.00017069673,0.000093454,0.0004630287,0.0000949754,0.000033463213,0.0005344001],"genre_scores_gemma":[0.99871176,0.0003109261,0.0000400588,0.00044582845,0.00002086784,0.0002011637,0.000016756414,0.00002940838,0.00022323086],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892205,0.00011156854,0.0002248434,0.00021435352,0.0003092846,0.00021792279],"domain_scores_gemma":[0.9992713,0.00007157893,0.00009165603,0.00044167505,0.000012920405,0.00011089974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014144571,0.000148354,0.00019283098,0.00011655012,0.0002538895,0.000009386874,0.0000768684,0.000022254044,0.0004357777],"category_scores_gemma":[0.00001869273,0.00009830086,0.00007317923,0.00023888043,0.00015704772,0.00004694132,0.00009290233,0.00017863864,0.000022496222],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022923304,0.0025278481,0.97222984,0.00004477263,0.00041041485,0.000264686,0.00034043007,0.0005189062,0.0070276577,0.00038092755,0.0006381847,0.013323986],"study_design_scores_gemma":[0.0022083852,0.00053325895,0.8556718,0.000057976355,0.00015627871,0.000020055717,0.00018718762,0.000021903488,0.005699903,0.00006911669,0.13523538,0.00013872869],"about_ca_topic_score_codex":0.00050327583,"about_ca_topic_score_gemma":0.00019884067,"teacher_disagreement_score":0.1345972,"about_ca_system_score_codex":0.00034738943,"about_ca_system_score_gemma":0.00013592465,"threshold_uncertainty_score":0.47714603},"labels":[],"label_agreement":null},{"id":"W4205386486","doi":"10.3390/v14010072","title":"A Cross Sectional Sampling Reveals Novel Coronaviruses in Bat Populations of Georgia","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Biology; Coronavirus; Betacoronavirus; Phylogenetic tree; Subgenus; Zoology; Phylogenetics; Pandemic; Virology; Coronavirus disease 2019 (COVID-19); Evolutionary biology; Genetics; Genus; Gene","score_opus":0.24331704689212116,"score_gpt":0.4575460293615191,"score_spread":0.21422898246939795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205386486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99776334,0.00060349586,0.00040708258,0.000044891236,0.00015404387,0.00014601469,0.000082555605,0.000033262822,0.00076533295],"genre_scores_gemma":[0.98436373,0.000004296179,0.0016281753,0.013725376,0.0001406811,0.000022621127,0.000009991768,0.000020823014,0.000084323634],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99874324,0.000032487085,0.00036820633,0.00025752193,0.00036679587,0.00023173053],"domain_scores_gemma":[0.99918705,0.0002288614,0.000062026214,0.00026088615,0.000231697,0.000029487146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023628931,0.00010264208,0.00023871861,0.00017719851,0.00006753528,0.000031680673,0.000080822494,0.00009572554,0.00013645292],"category_scores_gemma":[0.00073767494,0.0000995324,0.0000846341,0.00048264748,0.000089800385,0.00012548867,0.00007945667,0.00019228313,0.000040281015],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009006086,0.00017178476,0.61637485,0.000054456323,0.000016738977,0.000017499156,0.00007009111,0.00001412097,0.38224202,0.0007354995,0.0000180001,0.00019483783],"study_design_scores_gemma":[0.0009960738,0.000042461703,0.8269382,0.000106471234,0.000011414364,0.000047852976,0.00005267417,0.00004954546,0.15432324,0.00034155883,0.017006079,0.00008439995],"about_ca_topic_score_codex":0.0011455074,"about_ca_topic_score_gemma":0.00049838115,"teacher_disagreement_score":0.2279188,"about_ca_system_score_codex":0.00012198345,"about_ca_system_score_gemma":0.0004831267,"threshold_uncertainty_score":0.40588135},"labels":[],"label_agreement":null},{"id":"W4205534036","doi":"10.3390/v14020177","title":"Identifying Inhibitors of −1 Programmed Ribosomal Frameshifting in a Broad Spectrum of Coronaviruses","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Research Council Canada; National Institutes of Health; Canadian Institutes of Health Research; Alberta Innovates; Alberta Innovates - Technology Futures","keywords":"Translational frameshift; Coronavirus disease 2019 (COVID-19); Broad spectrum; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Coronavirus; Biology; Virology; Computational biology; Spectrum (functional analysis); Genetics; Medicine; Chemistry; RNA; Ribosome; Gene; Physics; Outbreak","score_opus":0.02768938723456271,"score_gpt":0.28169521078209764,"score_spread":0.2540058235475349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205534036","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99781734,0.0014294046,0.00016008275,0.000024118945,0.00014930266,0.00023070248,0.000035450983,0.000009688915,0.00014393956],"genre_scores_gemma":[0.9987309,0.000050254046,0.0009465593,0.00008179413,0.00005752088,0.00007040027,0.000011983422,0.000021084395,0.00002951494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988735,0.00013293198,0.0003458609,0.00023119593,0.00021094395,0.0002055989],"domain_scores_gemma":[0.99948746,0.000025407966,0.00021398655,0.00022450229,0.000018215058,0.00003041979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030035112,0.00011165101,0.00019277545,0.00009763139,0.00006014786,0.000008633527,0.00021916357,0.00006248023,0.000095920084],"category_scores_gemma":[0.0001008088,0.00011853832,0.00008721589,0.00019146057,0.000060447648,0.0000055686173,0.0002506636,0.00009282822,0.0000015018895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012963486,0.00013370733,0.033298172,0.00003992134,0.00002547444,0.000004535253,0.00015041507,0.000040755724,0.9606779,0.0002739971,0.000031017,0.0051944717],"study_design_scores_gemma":[0.00032596863,0.00033177587,0.0028756661,0.000034163022,0.000009021195,0.0000051425677,0.00044991414,0.0000044427597,0.99139625,0.00044302057,0.0040014028,0.00012322253],"about_ca_topic_score_codex":0.00037621515,"about_ca_topic_score_gemma":0.000077861754,"teacher_disagreement_score":0.03071836,"about_ca_system_score_codex":0.0000137192255,"about_ca_system_score_gemma":0.00006180246,"threshold_uncertainty_score":0.48338524},"labels":[],"label_agreement":null},{"id":"W4205588375","doi":"10.3390/v14010110","title":"Photodynamic Inactivation of Human Coronaviruses","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Photodynamic Therapy Research Studies","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Dalhousie University","keywords":"Photosensitizer; Biology; Photodynamic therapy; Reactive oxygen species; Cytotoxic T cell; Cytotoxicity; Coronavirus; In vitro; Virology; Microbiology; Chemistry; Molecular biology; Biochemistry; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty)","score_opus":0.051592095329482765,"score_gpt":0.3699195175944238,"score_spread":0.31832742226494104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205588375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969905,0.00033301633,0.0000063543307,0.00008537979,0.000065886015,0.00035252966,0.000075112046,0.000068815556,0.0020224117],"genre_scores_gemma":[0.998723,0.00006857538,0.00003414911,0.00052499067,0.00002802791,0.00011980523,0.000025357354,0.000021903023,0.00045419837],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989264,0.000074777025,0.00020826465,0.00016863388,0.00044338556,0.00017851833],"domain_scores_gemma":[0.9994617,0.00008663923,0.00009834501,0.00025053337,0.000058408823,0.00004433783],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000190113,0.00009821759,0.00024466074,0.00018527903,0.0002334674,0.000004289407,0.00011987191,0.000018853776,0.0011100338],"category_scores_gemma":[0.00006870948,0.00009130394,0.00006507691,0.00028497755,0.0001244737,0.000072356896,0.0001668547,0.00020072608,0.000007471204],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003340003,0.00028299622,0.006678726,0.00004021541,0.00010545785,0.000012886622,0.00030508873,0.000011413028,0.9899969,0.0005576573,0.0005480358,0.0011266319],"study_design_scores_gemma":[0.0024417387,0.0024208443,0.1428366,0.00005245639,0.00006477243,0.000040907544,0.001774913,0.00011285294,0.8302942,0.0007510507,0.018985936,0.00022372502],"about_ca_topic_score_codex":0.0006520351,"about_ca_topic_score_gemma":0.000033087745,"teacher_disagreement_score":0.15970269,"about_ca_system_score_codex":0.00021099269,"about_ca_system_score_gemma":0.00008043025,"threshold_uncertainty_score":0.99980307},"labels":[],"label_agreement":null},{"id":"W4206100896","doi":"10.3390/v14010083","title":"Superficial Inguinal Lymph Nodes for Screening Dead Pigs for African Swine Fever","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency; National Pork Board","keywords":"Lymph; Veterinary medicine; Spleen; Tonsil; Herd; Biology; Virology; Medicine; Pathology; Immunology","score_opus":0.10001009658395459,"score_gpt":0.29041707587032284,"score_spread":0.19040697928636824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206100896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962249,0.0002019286,0.000447794,0.0016337421,0.00013863947,0.00036255416,0.0004743372,0.000085787724,0.0004303599],"genre_scores_gemma":[0.9948135,0.0000059934064,0.0006284178,0.003165676,0.00063454994,0.00028762984,0.000159141,0.0000017945734,0.00030331168],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990989,0.00005899249,0.0001677084,0.0002578516,0.00010173384,0.00031481785],"domain_scores_gemma":[0.99941564,0.00040650766,0.000058945046,0.000031984768,0.000029749266,0.00005720459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030672236,0.000108167565,0.0001659305,0.000015920366,0.0006489977,0.000027500173,0.00023256034,0.000027876249,0.0006831218],"category_scores_gemma":[0.00017710909,0.000048355523,0.00013394689,0.00014469256,0.000037518832,0.00007209828,0.00016087442,0.000038984315,0.0000070362826],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003981839,0.0006269283,0.50793993,0.00008308076,0.00023159206,0.000011864895,0.00025378965,0.0005007891,0.14861809,0.04203197,0.09975913,0.195961],"study_design_scores_gemma":[0.00043515174,0.00050339254,0.35426936,0.0000054210286,0.000059138172,0.000001200238,0.0012475627,0.001325391,0.00019558624,0.0025258232,0.639143,0.00028899728],"about_ca_topic_score_codex":0.0004516663,"about_ca_topic_score_gemma":0.00009487637,"teacher_disagreement_score":0.5393838,"about_ca_system_score_codex":0.000021150088,"about_ca_system_score_gemma":0.00000589564,"threshold_uncertainty_score":0.74797046},"labels":[],"label_agreement":null},{"id":"W4206224480","doi":"10.3390/v14010088","title":"Influenza A Virus Infection Activates NLRP3 Inflammasome through Trans-Golgi Network Dispersion","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inflammasome; Innate immune system; Cell biology; Influenza A virus; Pyroptosis; AIM2; Nigericin; Immune system; Virus; Biology; Virology; Chemistry; Inflammation; Immunology; Biochemistry","score_opus":0.0180544333513998,"score_gpt":0.264632376304878,"score_spread":0.2465779429534782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206224480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945923,0.0028453763,0.00031220823,0.000078035606,0.0004562054,0.00025757522,0.000032374264,0.0000592613,0.001366628],"genre_scores_gemma":[0.99439675,0.0016030183,0.00008651034,0.0029298381,0.00038396366,0.00015537902,0.00016480534,0.00005302673,0.00022673048],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99861866,0.00014374657,0.0002683955,0.00036979542,0.00020201867,0.00039740934],"domain_scores_gemma":[0.99942374,0.000017462587,0.00011179192,0.0003660703,0.000037565336,0.000043341755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016605963,0.00022872227,0.000176399,0.000050840103,0.00055857125,0.000037430804,0.00021187514,0.00011534142,0.00036710623],"category_scores_gemma":[0.00003686473,0.00023528546,0.0001644236,0.00026786161,0.00007787705,0.00003183706,0.00022712327,0.00022405697,0.00003326613],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000552221,0.0001303871,0.019139525,0.000018526096,0.00013372031,0.000004047675,0.0003737663,0.011811933,0.9585218,0.00019449227,0.006150024,0.0029695742],"study_design_scores_gemma":[0.000657366,0.0003824481,0.0034061708,0.0000073721076,0.000025551562,0.0000056062,0.00013669273,0.000021207465,0.2873444,0.00018976457,0.7075383,0.00028509917],"about_ca_topic_score_codex":0.0003910611,"about_ca_topic_score_gemma":0.00010419807,"teacher_disagreement_score":0.7013883,"about_ca_system_score_codex":0.000035755023,"about_ca_system_score_gemma":0.00006649329,"threshold_uncertainty_score":0.9594663},"labels":[],"label_agreement":null},{"id":"W4206365198","doi":"10.3390/v14010144","title":"Antigenicity of the Mu (B.1.621) and A.2.5 SARS-CoV-2 Spikes","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; University of Ottawa; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Antigenicity; Spike (software development); Receptor; Mutation; Neutralization; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Coronavirus disease 2019 (COVID-19); Biology; Spike Protein; Molecular biology; Virus; Antibody; Genetics; Gene; Medicine; Internal medicine","score_opus":0.08320500184451174,"score_gpt":0.36737831112677843,"score_spread":0.2841733092822667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206365198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956698,0.0012175108,0.0000075409157,0.0002853003,0.00012928659,0.00027302204,0.000033969347,0.00003448311,0.0023490915],"genre_scores_gemma":[0.94176024,0.000010130367,0.00003169704,0.058069043,0.00006257669,0.000023396826,3.8970748e-7,0.000016266174,0.000026259675],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988255,0.00009366167,0.00018364048,0.00021221815,0.0004708882,0.0002140932],"domain_scores_gemma":[0.9993825,0.00010122659,0.00006199387,0.00039152527,0.00004852981,0.000014235049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002791146,0.000103017286,0.00021514016,0.000098785706,0.00019545793,0.000013824778,0.00021343403,0.000029431081,0.000031978645],"category_scores_gemma":[0.00016404936,0.00007140085,0.00009012396,0.00035455104,0.00020262181,0.00005283832,0.00036949996,0.00025491772,0.000014432306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001465009,0.00010955854,0.25758636,0.0000522961,0.00002818583,0.000015486663,0.00022693262,1.8075687e-7,0.7386211,0.00022761931,0.0018008881,0.0011848693],"study_design_scores_gemma":[0.0005042882,0.00013981923,0.027089251,0.000015436075,0.00002543178,0.000027089503,0.0001670544,0.000028784305,0.70657104,0.00013929344,0.26523095,0.000061577804],"about_ca_topic_score_codex":0.0009709138,"about_ca_topic_score_gemma":0.00008402291,"teacher_disagreement_score":0.26343006,"about_ca_system_score_codex":0.000039769708,"about_ca_system_score_gemma":0.00016936476,"threshold_uncertainty_score":0.29116422},"labels":[],"label_agreement":null},{"id":"W4206459250","doi":"10.3390/v14010151","title":"Four Novel Mycoviruses from the Hypovirulent Botrytis cinerea SZ-2-3y Isolate from Paris polyphylla: Molecular Characterisation and Mitoviral Sequence Transboundary Entry into Plants","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agriculture and Agri-Food Canada; National Key Research and Development Program of China; Huazhong Agricultural University; Chinese Academy of Agricultural Sciences","keywords":"Botrytis cinerea; Mycovirus; Fungus; Mycelium; Botrytis; Sequence analysis; Strain (injury)","score_opus":0.03722092121789774,"score_gpt":0.27974938792490117,"score_spread":0.24252846670700343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206459250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991432,0.0030886226,0.0005960624,0.00038053188,0.00034051997,0.00021535001,0.003824941,0.000024648645,0.000097290365],"genre_scores_gemma":[0.9943845,0.0016125172,0.0002792275,0.0020824713,0.0003220607,0.00008204769,0.001097778,0.00003111522,0.00010827308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984658,0.00017862448,0.00026209324,0.00049540226,0.0003090308,0.00028908503],"domain_scores_gemma":[0.99929,0.0001089443,0.0001050255,0.0003695437,0.000032425658,0.00009408006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012966279,0.0002290877,0.00018156513,0.000058329784,0.0004991734,0.00014362097,0.00034663908,0.00010593421,0.00022414162],"category_scores_gemma":[0.000045558896,0.00019490314,0.000087757995,0.00009218179,0.000115116534,0.000030859825,0.00027963298,0.0003393946,0.000025209465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053301535,0.0000848851,0.012733886,0.000005241346,0.00013870429,0.000031972402,0.0003192764,0.000025877873,0.98167473,0.000012496388,0.0016877037,0.0027521958],"study_design_scores_gemma":[0.0012094262,0.00038877255,0.059923958,0.00003735385,0.000082404506,0.000081601385,0.0007581359,0.0005187267,0.7306849,0.00017880241,0.2055647,0.00057124184],"about_ca_topic_score_codex":0.009589982,"about_ca_topic_score_gemma":0.00043210667,"teacher_disagreement_score":0.25098985,"about_ca_system_score_codex":0.00004325887,"about_ca_system_score_gemma":0.000109049026,"threshold_uncertainty_score":0.9970052},"labels":[],"label_agreement":null},{"id":"W4206649778","doi":"10.3390/v14010159","title":"Development and Evaluation of a Molecular Hepatitis A Virus Assay for Serum and Stool Specimens","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; St. Joseph’s Healthcare Hamilton; University Health Network; Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"Virology; Outbreak; Hepatitis a virus; Serology; Hepatitis A; Norovirus; Medicine; Virus; Biology; Hepatitis; Immunology; Antibody","score_opus":0.09574856163344982,"score_gpt":0.3523484215230386,"score_spread":0.2565998598895888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206649778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99557096,0.002658595,0.000248311,0.0003118731,0.00008849921,0.0006285592,0.00011218614,0.000016001084,0.0003650278],"genre_scores_gemma":[0.9903415,0.0012813322,0.0057519036,0.0021390393,0.000033867393,0.0003842827,0.000017447377,0.000018121325,0.000032516808],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892426,0.00015375276,0.00028010327,0.00021411687,0.00025720117,0.00017054728],"domain_scores_gemma":[0.9994648,0.00016586884,0.000097722266,0.00011457729,0.000099350975,0.000057696325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012166196,0.000100500416,0.00030838986,0.0000757608,0.0001653785,0.000003910425,0.000029140356,0.000031279746,0.0001660945],"category_scores_gemma":[0.0003928903,0.00009434876,0.00003122756,0.00007494579,0.00005798917,0.00002968566,0.00012552361,0.00006888901,0.0000016310579],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005309182,0.00037630115,0.69077784,0.00037054173,0.00087457284,0.000037817048,0.0035791444,0.00014836552,0.13070685,0.006110907,0.0066540833,0.15983266],"study_design_scores_gemma":[0.0048128245,0.0014006802,0.5819777,0.00007897955,0.00065501966,0.00007415083,0.00072049676,0.0042697517,0.042235505,0.0009942503,0.3624007,0.00037991354],"about_ca_topic_score_codex":0.0010020132,"about_ca_topic_score_gemma":0.0011643991,"teacher_disagreement_score":0.35574663,"about_ca_system_score_codex":0.00009971287,"about_ca_system_score_gemma":0.00011602123,"threshold_uncertainty_score":0.38474306},"labels":[],"label_agreement":null},{"id":"W4206844248","doi":"10.3390/v14010060","title":"The Thiazole-5-Carboxamide GPS491 Inhibits HIV-1, Adenovirus, and Coronavirus Replication by Altering RNA Processing/Accumulation","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Regina; AIDS Vancouver; McMaster University; Université de Sherbrooke; Simon Fraser University; University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"Viral replication; RNA; Gene expression; Biology; Virology; Molecular biology; Coronavirus; RNA splicing; Gene; Virus; Chemistry; Biochemistry","score_opus":0.053780880144165995,"score_gpt":0.35491909852960296,"score_spread":0.301138218385437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206844248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9798485,0.018603856,0.0003206457,0.00053495466,0.00005663507,0.0002086163,0.000043389457,0.000035819394,0.00034760157],"genre_scores_gemma":[0.9946756,0.0029970978,0.00011802885,0.0010768587,0.00019945175,0.00006114946,0.00016170104,0.00004481924,0.0006653127],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848664,0.0001356413,0.00025697777,0.00056014815,0.00025149164,0.00030909132],"domain_scores_gemma":[0.99893427,0.000042368465,0.000112392285,0.00066309987,0.00015536198,0.00009251443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003810279,0.0001777178,0.00012166317,0.000029474262,0.0003727861,0.0001778499,0.00020444488,0.00012463408,0.00001741171],"category_scores_gemma":[0.00018675906,0.00015177435,0.000041016803,0.00016291041,0.0001412088,0.000020064828,0.00018541314,0.00014363055,0.000021339234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003853095,0.000032558757,0.001329429,0.000016373619,0.000028755336,0.0000018649426,0.0000402095,0.000037204107,0.9383746,0.000024703733,0.001482313,0.058246717],"study_design_scores_gemma":[0.0004069684,0.00020683592,0.0011937519,0.000021362504,0.000011036762,0.000013044077,0.000049684702,0.00027666293,0.9300387,0.000080241334,0.06752209,0.00017962625],"about_ca_topic_score_codex":0.000028345996,"about_ca_topic_score_gemma":0.0001562498,"teacher_disagreement_score":0.06603978,"about_ca_system_score_codex":0.000028365439,"about_ca_system_score_gemma":0.00015679281,"threshold_uncertainty_score":0.6189178},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W4210254172","doi":"10.3390/v14020273","title":"High Level of Pre-Treatment HIV-1 Drug Resistance and Its Association with HLA Class I-Mediated Restriction in the Pumwani Sex Worker Cohort","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"George & Fay Yee Centre for Healthcare Innovation; Public Health Agency of Canada; University of Manitoba","funders":"Canadian Institutes of Health Research; Max Rady College of Medicine, University of Manitoba; University of Manitoba; Manitoba Medical Service Foundation","keywords":"Human leukocyte antigen; Drug resistance; Integrase; Allele; Medicine; Cohort; Immunology; Population; Antiretroviral therapy; Human immunodeficiency virus (HIV); Gene; Biology; Virology; Viral load; Genetics; Internal medicine; Antigen","score_opus":0.02779437296411999,"score_gpt":0.2585526450482999,"score_spread":0.2307582720841799,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210254172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942616,0.00044734345,0.000004230932,0.0038059042,0.000053413303,0.0007501791,0.00012680954,0.000030293899,0.0005201758],"genre_scores_gemma":[0.9683841,0.0003864744,0.00018053426,0.0001987121,0.00002800273,0.00029936366,0.00015307218,0.00001482456,0.030354949],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987358,0.0001596154,0.00023786529,0.00021821864,0.0004844837,0.00016405483],"domain_scores_gemma":[0.99934113,0.00025825098,0.00016690063,0.00015218969,0.00004607774,0.000035447327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033899763,0.00013647485,0.00024393525,0.00011939252,0.00012975957,0.00001266097,0.000052058247,0.000036495443,0.00004764091],"category_scores_gemma":[0.000054697815,0.00008660754,0.000024453877,0.00041689223,0.00001795657,0.000068293164,0.000025017865,0.0001205378,0.000008189347],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063392264,0.0005417099,0.981796,0.000019010622,0.00029814884,0.00005816034,0.002686592,0.000026892396,0.00047142748,0.00016426129,0.013127696,0.00017615357],"study_design_scores_gemma":[0.0033301741,0.0001673131,0.9394634,0.000076760414,0.00025824347,0.0000052523455,0.0010491904,0.000030536474,0.0048234765,0.00003141763,0.05062882,0.00013543919],"about_ca_topic_score_codex":0.0001667916,"about_ca_topic_score_gemma":0.00055544515,"teacher_disagreement_score":0.04233265,"about_ca_system_score_codex":0.0005923415,"about_ca_system_score_gemma":0.00013483196,"threshold_uncertainty_score":0.3531753},"labels":[],"label_agreement":null},{"id":"W4210315943","doi":"10.3390/v14020318","title":"Cryo-EM Structure of a Possum Enterovirus","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Capsid; Enterovirus; Resolution (logic); Biology; Virology; Enterovirus 71; Virus","score_opus":0.03267438138421555,"score_gpt":0.329058422202027,"score_spread":0.29638404081781144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210315943","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977209,0.0009721792,0.000007866653,0.00012333576,0.00016972712,0.00012610904,0.00008016129,0.00002920747,0.0007705174],"genre_scores_gemma":[0.9984241,0.000032525568,0.00005163588,0.00088099786,0.00003579704,0.000010008793,0.000008260048,0.000009851325,0.0005467991],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994349,0.000052535623,0.00012194374,0.00010518461,0.00015382613,0.00013159722],"domain_scores_gemma":[0.99968064,0.00002006458,0.000035043573,0.00019942407,0.00003903639,0.000025808677],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000041630166,0.000056781322,0.00014516518,0.00014432748,0.0001232702,0.00000544984,0.00007391158,0.000028493396,0.003189198],"category_scores_gemma":[0.000037326932,0.00004774784,0.000051109153,0.00020968665,0.00006373879,0.000043325395,0.00013049538,0.00025510002,0.000022709637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002972184,0.00017930898,0.044921126,0.000027722359,0.00008218173,0.000018010207,0.00021890599,0.0000076037336,0.9462654,0.0002963178,0.0031385445,0.0045476654],"study_design_scores_gemma":[0.0028618847,0.004594765,0.17107031,0.000030439856,0.000108832726,0.0003426388,0.0018085673,0.00004289621,0.480927,0.0004867258,0.33751678,0.00020916153],"about_ca_topic_score_codex":0.00019927027,"about_ca_topic_score_gemma":0.000013614659,"teacher_disagreement_score":0.46533838,"about_ca_system_score_codex":0.000034994697,"about_ca_system_score_gemma":0.0000556853,"threshold_uncertainty_score":0.997722},"labels":[],"label_agreement":null},{"id":"W4210363551","doi":"10.3390/v14020246","title":"A Viral Long Non-Coding RNA Protects against Cell Death during Human Cytomegalovirus Infection of CD14+ Monocytes","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Medical Research Council Canada; Wellcome Trust","keywords":"Human cytomegalovirus; CD14; Biology; Virology; Reactive oxygen species; Virus; Apoptosis; Downregulation and upregulation; SOD2; Oxidative stress; Viral replication; Monocyte; Superoxide dismutase; Gene; Immunology; Immune system; Cell biology; Genetics","score_opus":0.04287509972531825,"score_gpt":0.3202065440342576,"score_spread":0.2773314443089393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210363551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917182,0.00037113042,0.00010299542,0.000030584826,0.00012749301,0.00115737,0.000049396782,0.00015875827,0.006284128],"genre_scores_gemma":[0.99802285,0.00021221706,0.00011601328,0.00022260894,0.00023264342,0.00030603324,0.000022223427,0.000088454115,0.000776941],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99734247,0.00012915565,0.0005688839,0.0005137995,0.00081732264,0.00062835845],"domain_scores_gemma":[0.99882567,0.00006755292,0.0002496834,0.00051922956,0.00011753636,0.00022032301],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00047601416,0.00030894825,0.0005709088,0.0008148171,0.0008133552,0.000064808766,0.00023093254,0.00010647051,0.000581919],"category_scores_gemma":[0.00006896794,0.0003100413,0.00024958854,0.0006729316,0.00010210524,0.0002854849,0.00046257066,0.00082087563,0.0000719282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006818945,0.0005385935,0.080548115,0.00057780865,0.00010040422,0.0002209004,0.00044929795,0.0002668424,0.91439146,0.00007388296,0.00012339155,0.0020274415],"study_design_scores_gemma":[0.0029329297,0.0008280388,0.112505734,0.00013068765,0.000054812685,0.000038577222,0.0000968492,0.0004330077,0.87973905,0.000041427193,0.0028646318,0.0003342728],"about_ca_topic_score_codex":0.0032452529,"about_ca_topic_score_gemma":0.00011035689,"teacher_disagreement_score":0.034652397,"about_ca_system_score_codex":0.0004994843,"about_ca_system_score_gemma":0.00021747702,"threshold_uncertainty_score":0.99993515},"labels":[],"label_agreement":null},{"id":"W4210676595","doi":"10.3390/v14020291","title":"Poly(rC)-Binding Protein 1 Limits Hepatitis C Virus Virion Assembly and Secretion","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Dalhousie University; University of Alberta; Canada Research Chairs; McGill University","keywords":"Virology; Secretion; Virus; Hepatitis C virus; Chemistry; Biology; Biochemistry","score_opus":0.05452900220509714,"score_gpt":0.3282293494719361,"score_spread":0.27370034726683895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210676595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937349,0.0011407188,0.0000792977,0.0006630392,0.00013622336,0.00087636523,0.00014996568,0.00016882489,0.0030506796],"genre_scores_gemma":[0.9958917,0.0006400031,0.0004634593,0.0008154852,0.00015225638,0.00038312178,0.00006690754,0.00006247767,0.0015245926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977244,0.00026599786,0.0002987017,0.00042166054,0.0008518236,0.00043742324],"domain_scores_gemma":[0.9991871,0.00009293733,0.00009221988,0.00031963282,0.00007074009,0.00023734053],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005074257,0.0001892601,0.00029201695,0.0003671649,0.00048590335,0.00007250538,0.00012825296,0.000082585335,0.0013151215],"category_scores_gemma":[0.0003464231,0.00019529645,0.00006318022,0.0004635443,0.000091149064,0.00025539336,0.00023219202,0.0005094411,0.00020087557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024467072,0.0001540878,0.075210996,0.00008381978,0.00005293646,0.00022881625,0.0002673514,9.652173e-7,0.86653244,0.00043607503,0.0013442505,0.05544356],"study_design_scores_gemma":[0.002740958,0.0028343364,0.054613218,0.00026731935,0.00009799681,0.00018458562,0.0002829075,0.001412966,0.6130403,0.0001669814,0.32368383,0.000674595],"about_ca_topic_score_codex":0.004695618,"about_ca_topic_score_gemma":0.00063683523,"teacher_disagreement_score":0.3223396,"about_ca_system_score_codex":0.0003105539,"about_ca_system_score_gemma":0.00019804935,"threshold_uncertainty_score":0.9995978},"labels":[],"label_agreement":null},{"id":"W4210818486","doi":"10.3390/v14020281","title":"Viral Proteins with PxxP and PY Motifs May Play a Role in Multiple Sclerosis","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Multiple sclerosis; Virus; Biology; Virology; Cytomegalovirus; Disease; Immune system; Cell biology; Immunology; Herpesviridae; Medicine; Viral disease; Pathology","score_opus":0.08077947837192721,"score_gpt":0.28396537813429246,"score_spread":0.20318589976236523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210818486","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0040963977,0.9937209,0.0000026070354,0.000009329105,0.00020900814,0.0010338015,0.00026286615,0.000064456486,0.0006006531],"genre_scores_gemma":[0.0020928823,0.9939192,0.000032931875,0.0001239611,0.000013514587,0.00065462815,0.00012109652,0.000047480135,0.0029942933],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979465,0.0007160457,0.00043775968,0.00046678484,0.000038815328,0.0003940759],"domain_scores_gemma":[0.99898475,0.00042555347,0.00019154242,0.00036804014,0.000013238658,0.000016869219],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002088899,0.00042674338,0.001173558,0.0004337577,0.00019562416,0.00003300072,0.00032184643,0.00036049736,0.0009797101],"category_scores_gemma":[0.00012956696,0.00031120065,0.00015171607,0.00022617687,0.00022844416,0.0000850547,0.00028408997,0.00074940186,0.00017236742],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001028753,0.00038973417,0.00030204168,0.0024625575,0.0006831358,0.00002558717,0.00046252756,6.5503235e-7,0.0040710885,0.00027198702,0.0008070166,0.9894949],"study_design_scores_gemma":[0.00085982744,0.00043091542,0.00009231117,0.0038263325,0.00015527195,0.000069149944,0.0001259861,2.26898e-7,0.001968352,0.000003980543,0.9921246,0.00034305194],"about_ca_topic_score_codex":0.00074116606,"about_ca_topic_score_gemma":0.00018637501,"teacher_disagreement_score":0.9913176,"about_ca_system_score_codex":0.000101420796,"about_ca_system_score_gemma":0.00024831522,"threshold_uncertainty_score":0.999934},"labels":[],"label_agreement":null},{"id":"W4211046815","doi":"10.3390/v14020361","title":"Monocyte Gene and Molecular Expression Profiles Suggest Distinct Effector and Regulatory Functions in Beninese HIV Highly Exposed Seronegative Female Commercial Sex Workers","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; Université du Québec à Montréal; Hôpital Maisonneuve-Rosemont; Université Laval; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"CD14; CD11c; Biology; CD163; Immunology; Monocyte; Population; Effector; Myeloid; Transcriptome; IRF8; Immune system; Gene expression; Gene; Medicine; Genetics; Phenotype","score_opus":0.020203563661354628,"score_gpt":0.2588860022100109,"score_spread":0.23868243854865628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211046815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99498886,0.0036625976,0.000023553304,0.000090786176,0.00009215082,0.00047684266,0.00055129593,0.000042423315,0.00007150257],"genre_scores_gemma":[0.9985323,0.000021095295,0.00006723262,0.000054172386,0.00001353325,0.0003729054,0.0003883093,0.000017172173,0.0005332718],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987122,0.00049396744,0.00015040042,0.00031768845,0.0000552359,0.00027053634],"domain_scores_gemma":[0.9995147,0.00020613366,0.000050177172,0.00016839556,0.000014824832,0.000045798944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013883693,0.00016261407,0.00021582046,0.00012546196,0.00041419585,0.00001617673,0.000079838355,0.000069766196,0.0002273647],"category_scores_gemma":[0.00003552633,0.00013858643,0.000029909213,0.000123855,0.00021740397,0.00007609292,0.000249296,0.000235517,0.000053989155],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006574817,0.0001924556,0.43748835,0.000015554931,0.00008539985,0.000060760693,0.00047683434,0.00001248503,0.55798644,0.000015899532,0.0015081688,0.00150018],"study_design_scores_gemma":[0.0028292206,0.0004420989,0.5919038,0.000026582782,0.00002704826,0.000021980337,0.0007092443,0.0000021597784,0.3991898,0.000008225656,0.004664655,0.00017516968],"about_ca_topic_score_codex":0.00018807394,"about_ca_topic_score_gemma":0.000051370625,"teacher_disagreement_score":0.15879664,"about_ca_system_score_codex":0.00007006364,"about_ca_system_score_gemma":0.00004613964,"threshold_uncertainty_score":0.56513906},"labels":[],"label_agreement":null},{"id":"W4212981954","doi":"10.3390/v14020395","title":"Influenza A(H1N1)pdm09 Virus but Not Respiratory Syncytial Virus Interferes with SARS-CoV-2 Replication during Sequential Infections in Human Nasal Epithelial Cells","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Virus; Virology; Viral replication; Biology; Respiratory system; Influenza A virus; Viral shedding; Immunology; Microbiology","score_opus":0.11333189038135777,"score_gpt":0.3990477457416702,"score_spread":0.2857158553603124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212981954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968064,0.00013665574,0.0000837949,0.00004873017,0.00033064015,0.0011828888,0.0002260988,0.00034817014,0.00083666167],"genre_scores_gemma":[0.9958106,0.000019432111,0.00003660549,0.0024995666,0.00050915295,0.00083483325,0.000018406428,0.00012161124,0.00014975845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99584675,0.0006352967,0.0009145658,0.0009992725,0.0009236778,0.000680443],"domain_scores_gemma":[0.9979434,0.00010639211,0.00027472543,0.0013140728,0.00020196858,0.00015942656],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00082354754,0.00041038223,0.00054510176,0.0014138834,0.000998217,0.00014079637,0.00036966839,0.00017533795,0.00052470894],"category_scores_gemma":[0.00024403015,0.00040466423,0.00016418021,0.0011991826,0.00035805814,0.0005590371,0.000495773,0.0014213445,0.00020145008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020864087,0.00081587944,0.015418258,0.00008100897,0.000115864714,0.0002030395,0.0002837304,0.000835978,0.97911596,0.00018923711,0.0003681486,0.00048649198],"study_design_scores_gemma":[0.0033469093,0.0021702943,0.015545083,0.00006255894,0.00006296028,0.00009305685,0.00009112513,0.000048657337,0.93606126,0.000028987906,0.042095516,0.0003935701],"about_ca_topic_score_codex":0.0060125696,"about_ca_topic_score_gemma":0.0018625713,"teacher_disagreement_score":0.043054674,"about_ca_system_score_codex":0.0011464094,"about_ca_system_score_gemma":0.0005288219,"threshold_uncertainty_score":0.9998405},"labels":[],"label_agreement":null},{"id":"W4213156138","doi":"10.3390/v14020377","title":"Zika Virus Infection of Sertoli Cells Alters Protein Expression Involved in Activated Immune and Antiviral Response Pathways, Carbohydrate Metabolism and Cardiovascular Disease","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; University of Manitoba; Research Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Zika virus; Immune system; Biology; Sertoli cell; Virus; Disease; Virology; Immunology; Medicine; Endocrinology; Internal medicine","score_opus":0.015469578118779113,"score_gpt":0.23275591035287613,"score_spread":0.21728633223409702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213156138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9859332,0.012767087,0.000011063187,0.000047328263,0.000090989815,0.0009549039,0.00014391085,0.00004407015,0.000007447896],"genre_scores_gemma":[0.99887353,0.0006093269,0.000018290566,0.00012842179,0.000035883717,0.00026990555,0.000018548404,0.000030950607,0.000015152356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99814093,0.00060403196,0.00030741707,0.00038401046,0.00033927112,0.00022433362],"domain_scores_gemma":[0.99922574,0.000052516716,0.00011004593,0.00041462065,0.00003991996,0.00015715965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004382629,0.00019694823,0.0005138886,0.00025489734,0.0001214629,0.000020593561,0.000056756406,0.000046120516,0.000027683252],"category_scores_gemma":[0.00010970229,0.00017800274,0.00016545506,0.0002934338,0.00007909231,0.00018002599,0.000162821,0.00019097359,7.413946e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010415682,0.00025818904,0.007732784,0.00013318099,0.00018356409,0.00012602296,0.00028056744,0.00015454888,0.9787187,0.000013231705,0.000013604458,0.0019699528],"study_design_scores_gemma":[0.0042233565,0.00024411769,0.1768734,0.00016859289,0.0003948421,0.000002453113,0.0002445014,0.00059696625,0.814901,0.000043822987,0.00208449,0.00022247252],"about_ca_topic_score_codex":0.0028978414,"about_ca_topic_score_gemma":0.000014908836,"teacher_disagreement_score":0.1691406,"about_ca_system_score_codex":0.000038634556,"about_ca_system_score_gemma":0.00013007593,"threshold_uncertainty_score":0.7258741},"labels":[],"label_agreement":null},{"id":"W4213419995","doi":"10.3390/v14030453","title":"Distinct Plasma Concentrations of Acyl-CoA-Binding Protein (ACBP) in HIV Progressors and Elite Controllers","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University; HIV Legal Network; Université de Montréal; McGill University Health Centre","funders":"Agence Nationale de la Recherche; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"CD8; Human immunodeficiency virus (HIV); Immune system; T cell; Intracellular; Medicine; Immunology; Chemistry; Endocrinology; Biology; Internal medicine; Biochemistry","score_opus":0.023343585909154717,"score_gpt":0.2780913236504316,"score_spread":0.2547477377412769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213419995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99651074,0.0014585966,0.000001909392,0.00022042879,0.000045967492,0.0006332033,0.0006015986,0.000020745778,0.00050679065],"genre_scores_gemma":[0.9986211,0.00003879326,0.000033347656,0.000015120616,0.0000037947098,0.00036694802,0.00013095699,0.000006938778,0.00078300486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991304,0.00022122657,0.00018650765,0.0001669526,0.00004385171,0.0002510523],"domain_scores_gemma":[0.99966717,0.00012442963,0.00006802481,0.000103943916,0.000015288504,0.000021142485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014686471,0.000087971785,0.00018001623,0.000100687284,0.0002012019,0.000009360701,0.00008848773,0.000036147747,0.0005256868],"category_scores_gemma":[0.000073750154,0.00007543913,0.000029176472,0.00012272765,0.00019723101,0.00005608382,0.00009054797,0.00016882051,0.00006866443],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012310804,0.0006104985,0.18090843,0.000033976103,0.00029334848,0.00005469491,0.0011443514,0.000014081326,0.8049609,0.002635395,0.0006993332,0.007413915],"study_design_scores_gemma":[0.027368713,0.002038037,0.05396049,0.00021529323,0.00009981177,0.000074946794,0.0042732735,0.00006679297,0.739696,0.00026033394,0.17134024,0.00060603983],"about_ca_topic_score_codex":0.000105118015,"about_ca_topic_score_gemma":0.000094324925,"teacher_disagreement_score":0.17064092,"about_ca_system_score_codex":0.000049124475,"about_ca_system_score_gemma":0.00007038411,"threshold_uncertainty_score":0.5755902},"labels":[],"label_agreement":null},{"id":"W4214604533","doi":"10.3390/v14030471","title":"Transient Increases in Inflammation and Proapoptotic Potential Are Associated with the HESN Phenotype Observed in a Subgroup of Kenyan Female Sex Workers","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; University of Winnipeg","funders":"Canadian Institutes of Health Research; Public Health Agency of Canada","keywords":"Proinflammatory cytokine; Phenotype; Interferon; Peripheral blood mononuclear cell; Immune system; Human immunodeficiency virus (HIV); Immunology; Inflammation; Biology; Gene; In vitro; Genetics","score_opus":0.020458875313516322,"score_gpt":0.22059023173327177,"score_spread":0.20013135641975546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214604533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809396,0.0013436131,0.0000035772318,0.00012969543,0.000049130253,0.00030109182,0.000026033527,0.000017574213,0.000035315723],"genre_scores_gemma":[0.99961346,0.00002040507,0.0000030791468,0.000074735835,0.0000036017098,0.000057929057,0.000032154996,0.000010296288,0.00018434807],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99871224,0.0006900025,0.0002230837,0.00014707426,0.000045782817,0.00018181933],"domain_scores_gemma":[0.99955255,0.0001700196,0.00013080807,0.000118389056,0.000021330286,0.000006916104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033835636,0.00010638115,0.00021033274,0.00013085878,0.000111295485,0.000009118147,0.000120188044,0.00005881664,0.00015648764],"category_scores_gemma":[0.000081059145,0.00007657245,0.000028401151,0.0002518624,0.0001435549,0.000069238675,0.000059450376,0.0002255762,0.0000031425868],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0068776836,0.00067852426,0.39623836,0.000042156094,0.00024147949,0.000026432102,0.00566524,0.00071632606,0.5877804,0.00008993294,0.000163384,0.0014800547],"study_design_scores_gemma":[0.0023171029,0.0005032914,0.93266547,0.000101205405,0.00003307871,0.00001192822,0.008191692,0.000023666556,0.05545778,0.000009465841,0.00055107585,0.0001342292],"about_ca_topic_score_codex":0.0012430568,"about_ca_topic_score_gemma":0.0015709731,"teacher_disagreement_score":0.53642714,"about_ca_system_score_codex":0.000054145283,"about_ca_system_score_gemma":0.000054322485,"threshold_uncertainty_score":0.3122534},"labels":[],"label_agreement":null},{"id":"W4214873802","doi":"10.3390/v14030516","title":"Apples to Apples? A Comparison of Real-World Tolerability of Antiretrovirals in Patients with Human Immunodeficiency Virus Infection and Patients with Primary Biliary Cholangitis","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Internal medicine; Combination therapy; Gastroenterology; Tolerability; Reverse-transcriptase inhibitor; Protease inhibitor (pharmacology); Clinical trial; Population; Adverse effect; Immunology; Viral load; Human immunodeficiency virus (HIV); Antiretroviral therapy","score_opus":0.0421553591607571,"score_gpt":0.3333476280797398,"score_spread":0.2911922689189827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214873802","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86843103,0.12741317,0.0000027110548,0.0000026119396,0.00004103835,0.0032602227,0.0003934071,0.000037112717,0.0004187287],"genre_scores_gemma":[0.32199037,0.6718019,0.00082055235,0.000055402234,0.000028714707,0.00091667054,0.0039807637,0.00017668802,0.00022889799],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99722415,0.00017290922,0.0010945867,0.0005764234,0.00065877143,0.00027317228],"domain_scores_gemma":[0.9984659,0.00014072361,0.00071240665,0.0004911266,0.000101568585,0.00008826689],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023576796,0.00047182007,0.002378467,0.00083527394,0.00010290782,0.000015057254,0.00012273855,0.00010126796,0.00008652805],"category_scores_gemma":[0.000032813787,0.00032407028,0.0001235247,0.0011059727,0.00014161305,0.00012971353,0.00016257958,0.00029242967,0.0000036761792],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021752711,0.0026415722,0.8766307,0.006299179,0.00020387632,0.0000025822426,0.00027710077,0.0000012152825,0.000004560593,0.000008860425,0.00006291502,0.113649905],"study_design_scores_gemma":[0.0023814898,0.0017676306,0.9046869,0.005904125,0.00071590306,7.0806186e-7,0.000021898702,1.5655552e-7,0.000051039468,0.0000012938898,0.084106565,0.00036225017],"about_ca_topic_score_codex":0.0018005153,"about_ca_topic_score_gemma":0.00070544274,"teacher_disagreement_score":0.54644066,"about_ca_system_score_codex":0.0004185923,"about_ca_system_score_gemma":0.0002398791,"threshold_uncertainty_score":0.99992114},"labels":[],"label_agreement":null},{"id":"W4220682279","doi":"10.3390/v14030559","title":"Revisiting the MMTV Zoonotic Hypothesis to Account for Geographic Variation in Breast Cancer Incidence","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Institute of Infection and Immunity; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Breast cancer; Cancer; Incidence (geometry); Population; Transmission (telecommunications); Cervical cancer; Disease; Outbreak; Pandemic; Demography; Immunology; Medicine; Oncology; Biology; Virology; Internal medicine; Environmental health; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty)","score_opus":0.05127249857987362,"score_gpt":0.2700844922651795,"score_spread":0.21881199368530588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220682279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98970145,0.0001845186,0.000014956568,0.009272429,0.00013795414,0.00029965217,0.00031964655,0.000025482415,0.000043922224],"genre_scores_gemma":[0.9936405,0.00007122528,0.00006788738,0.0054572173,0.0003269209,0.0004003847,0.000004019397,8.235105e-7,0.00003105181],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99916714,0.00012792752,0.0001647373,0.00019816551,0.00016645783,0.00017558651],"domain_scores_gemma":[0.9992006,0.00062031555,0.00006568876,0.000055341232,0.00003055348,0.000027516857],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006646798,0.00006998594,0.000093265546,0.000017540211,0.00042890367,0.00004903789,0.0002980585,0.000020295542,0.00097298535],"category_scores_gemma":[0.00014178497,0.000027289207,0.000045428107,0.0004364864,0.000019028528,0.00010202018,0.00013180653,0.00008057921,0.000007808255],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002874598,0.00011681542,0.25117883,0.000047520738,0.000030129508,0.00000475363,0.0011705821,0.0031157753,0.156756,0.006883821,0.0020428137,0.5783655],"study_design_scores_gemma":[0.000059124995,0.000035325163,0.96323633,0.000026621537,0.000008670446,0.0000034105622,0.00037052302,0.0001324285,0.0001236711,0.0013817438,0.034509175,0.00011299738],"about_ca_topic_score_codex":0.0064228503,"about_ca_topic_score_gemma":0.002434361,"teacher_disagreement_score":0.7120575,"about_ca_system_score_codex":0.000045705958,"about_ca_system_score_gemma":0.0000109372295,"threshold_uncertainty_score":0.9999403},"labels":[],"label_agreement":null},{"id":"W4220683058","doi":"10.3390/v14030605","title":"Multiscale Model of Antiviral Timing, Potency, and Heterogeneity Effects on an Epithelial Tissue Patch Infected by SARS-CoV-2","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Center for Advancing Translational Sciences; National Institute of Biomedical Imaging and Bioengineering; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; National Science Foundation","keywords":"Potency; Pharmacodynamics; Pharmacokinetics; Population; Drug; Pharmacology; Dosing; Drug metabolism; Metabolite; Medicine; Biology; Immunology; Internal medicine; In vitro","score_opus":0.05986656613417604,"score_gpt":0.3678289528029113,"score_spread":0.3079623866687352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220683058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983265,0.00024460052,0.00016232888,0.00004260967,0.000083127896,0.00052122126,0.0002455324,0.00008664313,0.00028747742],"genre_scores_gemma":[0.98526263,0.0000074615186,0.00017513333,0.014355121,0.000065624,0.000067180146,0.000012276591,0.00004230531,0.000012281093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982463,0.00021691968,0.00024018298,0.00042323105,0.0005305493,0.00034277857],"domain_scores_gemma":[0.9992911,0.00014066885,0.00007943519,0.00038956897,0.000058330763,0.000040855455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026302482,0.00020998943,0.00038650754,0.00017830989,0.000167472,0.00002048259,0.00016106582,0.00009000081,0.0000055042187],"category_scores_gemma":[0.000122012534,0.00019014352,0.00006608267,0.00022211164,0.00012273659,0.00012515123,0.00020438354,0.00031867743,0.000016466265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005786895,0.0005588022,0.04939352,0.000118604694,0.00004411076,0.000046458255,0.0002654977,0.0000061584124,0.93009275,0.000010567569,0.00043601944,0.018448846],"study_design_scores_gemma":[0.0019406043,0.0021296344,0.0033083716,0.00003485542,0.000044273194,0.000012873447,0.000018456187,0.008525499,0.9779077,0.000057025365,0.0058377287,0.00018297379],"about_ca_topic_score_codex":0.0020850892,"about_ca_topic_score_gemma":0.00012603276,"teacher_disagreement_score":0.047814976,"about_ca_system_score_codex":0.00006259682,"about_ca_system_score_gemma":0.00010777567,"threshold_uncertainty_score":0.77538276},"labels":[],"label_agreement":null},{"id":"W4220758045","doi":"10.3390/v14030640","title":"Mutations and Evolution of the SARS-CoV-2 Spike Protein","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":230,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute on Alcohol Abuse and Alcoholism; National Institutes of Health; Louisiana State University","keywords":"Spike Protein; Spike (software development); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Genetics; Biology; 2019-20 coronavirus outbreak; Mutation; Virology; Computational biology; Gene; Medicine; Computer science","score_opus":0.1593352990747304,"score_gpt":0.4228749590389728,"score_spread":0.26353965996424245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220758045","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006176486,0.9903534,0.000009323992,0.000028025692,0.00009969767,0.0018589249,0.00008329303,0.000036196074,0.001354636],"genre_scores_gemma":[0.0010182998,0.9877636,0.00011952204,0.008877124,0.00033598338,0.0015984982,0.000016278856,0.00013533088,0.00013536218],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99845386,0.00020772578,0.00037832558,0.00028662902,0.00047615202,0.00019728694],"domain_scores_gemma":[0.99906605,0.00016944563,0.0002025569,0.00049364305,0.000054680786,0.000013607395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002825194,0.0002042257,0.0007079672,0.00025016925,0.0001395036,0.000017907794,0.00022994968,0.0001319689,0.000024517467],"category_scores_gemma":[0.00047593052,0.00012968776,0.00026429712,0.00068187714,0.00019956238,0.000051744042,0.00021972413,0.00046449498,0.00003687026],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007729205,0.0004019898,0.0009978752,0.039700896,0.0004824069,0.00006495254,0.00021587936,4.08366e-8,0.0190777,0.0024604958,0.0014887393,0.9350317],"study_design_scores_gemma":[0.00021826218,0.00010607895,0.000047691305,0.0028244758,0.00037944256,0.000057191726,0.000030115374,0.0000021567994,0.004270938,0.00014224635,0.99180686,0.00011456505],"about_ca_topic_score_codex":0.000523287,"about_ca_topic_score_gemma":0.000045600093,"teacher_disagreement_score":0.9903181,"about_ca_system_score_codex":0.00022976339,"about_ca_system_score_gemma":0.0010775492,"threshold_uncertainty_score":0.52885133},"labels":[],"label_agreement":null},{"id":"W4220809071","doi":"10.3390/v14030538","title":"The Impact of Genital Ulcers on HIV Transmission Has Been Underestimated—A Critical Review","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Genital Health and Disease","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fonds Wetenschappelijk Onderzoek; University of Bristol; Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa; Johns Hopkins University; Instituut voor Tropische Geneeskunde; University of Ottawa; National Research, Development and Innovation Office; University of North Carolina at Chapel Hill; London School of Hygiene and Tropical Medicine; University of Washington","keywords":"Genital ulcer; Sex organ; Observational study; Transmission (telecommunications); Human immunodeficiency virus (HIV); Medicine; Relative risk; Disease; Meta-analysis; Internal medicine; Confidence interval; Sexually transmitted disease; Immunology; Biology","score_opus":0.27308504093870867,"score_gpt":0.48504903642429076,"score_spread":0.2119639954855821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220809071","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000013425603,0.99569,0.0000037210893,0.00037211963,0.00010147615,0.0013260697,0.0004921821,0.000050413822,0.0019505816],"genre_scores_gemma":[0.00024584835,0.9983465,0.000028931008,0.0007410364,0.00009211309,0.00012706801,0.00021127162,0.00006310041,0.00014410757],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977273,0.00029789508,0.0007554142,0.00032107733,0.00048564648,0.00041266344],"domain_scores_gemma":[0.99740535,0.0012048753,0.00017111038,0.00054357835,0.000051132352,0.00062395376],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029962376,0.00038279104,0.0013942396,0.000116565,0.0002967566,0.000021599615,0.00022968161,0.00013546665,0.0021012437],"category_scores_gemma":[0.00087538763,0.00020066915,0.0010947175,0.00034092358,0.0001959352,0.0000387843,0.00004397061,0.0005357106,0.00020400673],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022523702,0.00029741068,0.0000065279214,0.14672233,0.00008589034,0.00010544017,0.000011139564,5.214241e-7,5.0238526e-7,0.000091234826,0.040082105,0.8123717],"study_design_scores_gemma":[0.00024138064,0.0007710069,0.000024973173,0.021223664,0.002010182,0.000093806964,0.000008599803,0.0000041823428,8.902243e-7,0.000047815694,0.97539675,0.00017671825],"about_ca_topic_score_codex":0.00008855255,"about_ca_topic_score_gemma":8.063369e-7,"teacher_disagreement_score":0.93531466,"about_ca_system_score_codex":0.00024264243,"about_ca_system_score_gemma":0.0024101415,"threshold_uncertainty_score":0.99881095},"labels":[],"label_agreement":null},{"id":"W4220832512","doi":"10.3390/v14030609","title":"Gene-Edited Cell Models to Study Chronic Wasting Disease","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; University of Calgary","funders":"Alberta Innovates; Alberta Innovates - Technology Futures; Genome Canada","keywords":"Chronic wasting disease; Biology; CRISPR; Computational biology; Gene; Genome editing; Cas9; Gene isoform; Transgene; Disease; Virology; Genetics; Prion protein; Medicine; Scrapie","score_opus":0.10041668029655913,"score_gpt":0.34581815232137575,"score_spread":0.2454014720248166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220832512","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011510798,0.9964372,0.00015720385,0.0000029887467,0.00025015027,0.0014564245,0.00043263787,0.00003733241,0.000074972624],"genre_scores_gemma":[0.00064169895,0.9967671,0.000109510605,0.00021129132,0.0008196272,0.0008509609,0.00039491124,0.000107083244,0.00009780596],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979356,0.00025637742,0.000408015,0.0007802734,0.00025522913,0.0003644939],"domain_scores_gemma":[0.9986268,0.000031786207,0.00019313612,0.0007825104,0.000024454546,0.00034129954],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019356367,0.00042196183,0.0005766897,0.00011764358,0.000229912,0.000061455576,0.00059695,0.000109057524,0.00035091417],"category_scores_gemma":[0.00007030139,0.00039357864,0.0003916932,0.00023816827,0.000016042386,0.000004814386,0.00089217775,0.00018187585,0.000046034733],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032769974,0.00032036848,0.000022424087,0.0044593704,0.00020418919,0.00006093482,0.00002249886,0.00062145665,0.00044031054,0.0000031984507,0.0011658889,0.9926466],"study_design_scores_gemma":[0.00020263642,0.0002536875,0.0000018660047,0.00060533034,0.0005083784,0.0000024708843,0.000021091051,0.000020776546,0.00026262543,0.000006968143,0.9976242,0.00048997987],"about_ca_topic_score_codex":0.000011825882,"about_ca_topic_score_gemma":0.0000030574463,"teacher_disagreement_score":0.9964583,"about_ca_system_score_codex":0.0000827637,"about_ca_system_score_gemma":0.0005113227,"threshold_uncertainty_score":0.9998516},"labels":[],"label_agreement":null},{"id":"W4220878948","doi":"10.3390/v14030532","title":"Evolution of Anti-RBD IgG Avidity following SARS-CoV-2 Infection","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Héma-Québec; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Canada Foundation for Innovation; Canada Research Chairs; Fondation du CHUM","keywords":"Avidity; Antibody; Memory B cell; Affinity maturation; Immunology; Germinal center; Biology; Virology; Immune system; Antigen; B cell; Humoral immunity; Vaccination","score_opus":0.08040118002898715,"score_gpt":0.37732646335579023,"score_spread":0.29692528332680307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220878948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99685264,0.00046645044,0.00024214725,0.000055003657,0.00049008406,0.0002842021,0.000015502726,0.00011318686,0.001480816],"genre_scores_gemma":[0.99040544,0.0000038927355,0.00003961235,0.009323488,0.00014396959,0.000048800204,0.0000029102891,0.00002242933,0.000009439274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985117,0.0001265789,0.00024834287,0.00025418715,0.00060460315,0.00025461224],"domain_scores_gemma":[0.99943143,0.000085056534,0.00008108452,0.0003161077,0.00006986497,0.000016477534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048296075,0.000117015414,0.00026346138,0.00030521862,0.00021378843,0.000013665983,0.00010639474,0.0000583744,0.000027240256],"category_scores_gemma":[0.0002699797,0.0001151458,0.00018439227,0.00063641777,0.000056357498,0.0001618676,0.00015833185,0.00029216462,0.00005963343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010092608,0.00018308024,0.35748348,0.00004905991,0.0000449555,0.000024101206,0.00008401414,0.000002806188,0.64030516,0.00011108474,0.0009799564,0.00063133636],"study_design_scores_gemma":[0.0009859008,0.00037063137,0.06852876,0.000034542754,0.000066928566,0.000022111812,0.00009087931,0.00020085376,0.770254,0.00021172593,0.1591193,0.00011433396],"about_ca_topic_score_codex":0.004331915,"about_ca_topic_score_gemma":0.00009269046,"teacher_disagreement_score":0.28895473,"about_ca_system_score_codex":0.00034853048,"about_ca_system_score_gemma":0.00028055743,"threshold_uncertainty_score":0.6548589},"labels":[],"label_agreement":null},{"id":"W4220934545","doi":"10.3390/v14030540","title":"Antibodies to Crucial Epitopes on HSV-2 Glycoprotein D as a Guide to Dosing an mRNA Genital Herpes Vaccine","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Perelman School of Medicine, University of Pennsylvania; Center for AIDS Research, University of Washington; University of Pennsylvania","keywords":"Immunogen; Epitope; Virology; Neutralizing antibody; Antibody; Titer; Medicine; Immunogenicity; Messenger RNA; Immunology; Monoclonal antibody; Biology; Gene","score_opus":0.028102471033555832,"score_gpt":0.35506548925713477,"score_spread":0.3269630182235789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220934545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921471,0.00017686028,0.000051912186,0.0009885198,0.00042856316,0.0008271481,0.0000886091,0.00019158592,0.005099712],"genre_scores_gemma":[0.9879884,0.000018172866,0.002282355,0.0073400727,0.000514865,0.0002564191,0.00001687855,0.000054959066,0.001527855],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99845356,0.000089069064,0.000300554,0.00043831626,0.00036746776,0.00035103562],"domain_scores_gemma":[0.9991332,0.000046852845,0.000050989816,0.00041191172,0.000063018975,0.00029399342],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016679616,0.0002372899,0.0003322194,0.00034095175,0.00058575516,0.00006367825,0.00012708377,0.000044907993,0.0015752489],"category_scores_gemma":[0.00015870339,0.0002080719,0.000093703326,0.0004307794,0.000015527412,0.0001359234,0.00017117287,0.00014475302,0.00090163335],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0045636776,0.0044231056,0.02956225,0.00005560323,0.00068995263,0.0014427745,0.0030990036,0.00070766883,0.09877495,0.0011919481,0.023449548,0.83203954],"study_design_scores_gemma":[0.0019246894,0.004580064,0.017069435,0.00008861093,0.000112924055,0.00011982058,0.00045087733,0.000012186644,0.09508338,0.000107819,0.8801212,0.0003290302],"about_ca_topic_score_codex":0.003981717,"about_ca_topic_score_gemma":0.00039914632,"teacher_disagreement_score":0.85667163,"about_ca_system_score_codex":0.00022670305,"about_ca_system_score_gemma":0.000110550645,"threshold_uncertainty_score":0.99987626},"labels":[],"label_agreement":null},{"id":"W4220973737","doi":"10.3390/v14040684","title":"Inactivation Rates for Airborne Human Coronavirus by Low Doses of 222 nm Far-UVC Radiation","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Infection Control and Ventilation","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Tech University","funders":"Engineering and Physical Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Boeing","keywords":"Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus; 2019-20 coronavirus outbreak; Environmental science; Virology; Toxicology; Environmental health; Medicine; Environmental chemistry; Chemistry; Biology; Outbreak; Internal medicine; Infectious disease (medical specialty)","score_opus":0.0377393022590354,"score_gpt":0.35081108863521,"score_spread":0.3130717863761746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220973737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942412,0.00032258683,0.0038377866,0.00015768016,0.0002839849,0.00061948114,0.00015913974,0.000069018315,0.0003091557],"genre_scores_gemma":[0.9982445,0.000023015396,0.000040322117,0.0006508237,0.0001369496,0.00015883651,0.00040909078,0.000017010758,0.00031943157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926716,0.000046016794,0.0002550037,0.00014601715,0.00017789194,0.00010788623],"domain_scores_gemma":[0.9994526,0.000105775245,0.00020614875,0.00011285332,0.00009455552,0.000028101891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018793973,0.000085275155,0.00017223357,0.00011824638,0.00023529059,0.000009781886,0.00003604915,0.00003686959,0.00043624945],"category_scores_gemma":[0.00009875181,0.00008481626,0.00007062961,0.00015842388,0.000023615898,0.00015300528,0.00001653288,0.000080749465,0.00000530287],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012434367,0.00068099465,0.054307878,0.00011898344,0.00012294097,9.033917e-7,0.0002945818,0.00049151696,0.880887,0.002584583,0.009700706,0.049566526],"study_design_scores_gemma":[0.005893281,0.0013803268,0.26204225,0.00003332707,0.00016238894,0.0000053204967,0.000235648,0.0032789614,0.54240924,0.0004507877,0.1838869,0.00022156756],"about_ca_topic_score_codex":0.0002756877,"about_ca_topic_score_gemma":0.000011324728,"teacher_disagreement_score":0.33847773,"about_ca_system_score_codex":0.00011226111,"about_ca_system_score_gemma":0.000043482756,"threshold_uncertainty_score":0.47766256},"labels":[],"label_agreement":null},{"id":"W4223658130","doi":"10.3390/v14040785","title":"Combining a Universal Capture Ligand and Pan-Serotype Monoclonal Antibody to Develop a Pan-Serotype Lateral Flow Strip Test for Foot-and-Mouth Disease Virus Detection","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Foot-and-mouth disease virus; Virology; Serotype; Monoclonal antibody; Foot-and-mouth disease; Virus; Biology; Recombinant DNA; Antibody; Antigen; Immunology","score_opus":0.03449930610242646,"score_gpt":0.2623533822806681,"score_spread":0.22785407617824166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223658130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99767023,0.0002883698,0.000056045075,0.0007768794,0.0001326218,0.0004795067,0.00048232163,0.00008050556,0.00003354547],"genre_scores_gemma":[0.9977783,0.000053535972,0.00012641108,0.0015372348,0.00014053598,0.00007540291,0.00014568267,0.0000032015093,0.00013968987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891794,0.00008837723,0.00017540713,0.00039580374,0.00011738234,0.0003050824],"domain_scores_gemma":[0.99935997,0.00029380695,0.00007013408,0.00004459138,0.00004915957,0.00018234033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019639239,0.0001760857,0.00020506665,0.000032840555,0.0005912633,0.00006633172,0.00013938583,0.000049210084,0.000050031686],"category_scores_gemma":[0.00021896194,0.00009205309,0.00004553703,0.00031887257,0.000049502167,0.00012934933,0.0002858687,0.00010862883,0.000007578491],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036106536,0.0002983603,0.49943665,0.000058382244,0.00011605186,0.000047605943,0.00048278138,0.00008889318,0.44233862,0.00072999985,0.002305886,0.05048613],"study_design_scores_gemma":[0.0004598998,0.0008528301,0.96751726,0.000014343083,0.00007625786,0.0000026583884,0.00057403825,0.0012937706,0.00051251746,0.0004686126,0.027909104,0.00031872976],"about_ca_topic_score_codex":0.0008551225,"about_ca_topic_score_gemma":0.0007586796,"teacher_disagreement_score":0.46808058,"about_ca_system_score_codex":0.000030738345,"about_ca_system_score_gemma":0.000017610708,"threshold_uncertainty_score":0.45475793},"labels":[],"label_agreement":null},{"id":"W4224307713","doi":"10.3390/v14050852","title":"Infection with IBV DMV/1639 at a Young Age Leads to Increased Incidence of Cystic Oviduct Formation Associated with False Layer Syndrome","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Merck Animal Health; U.S. Poultry and Egg Association","keywords":"Oviduct; Coronavirus; Biology; Infectious bronchitis virus; Bronchitis; Incidence (geometry); Virology; Medicine; Immunology; Physiology; Disease; Internal medicine; Virus; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Endocrinology","score_opus":0.035766095405650115,"score_gpt":0.24236868546599613,"score_spread":0.206602590060346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224307713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898887,0.000044733344,0.000021092648,0.000052192925,0.000044803826,0.00032861604,0.0001041483,0.0001228064,0.0002927533],"genre_scores_gemma":[0.99943185,0.000008666877,0.000041023253,0.00021244382,0.000020991174,0.00014777706,0.000036856283,0.000002386703,0.000098004486],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988061,0.00017766086,0.00020773038,0.00022408998,0.0003654416,0.0002189764],"domain_scores_gemma":[0.99938405,0.00020709439,0.00019120322,0.000060798397,0.00010008674,0.000056742127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002881056,0.00015055943,0.00021845398,0.000048938873,0.0007027524,0.000029701836,0.00011773708,0.000035651075,0.00023417891],"category_scores_gemma":[0.00019617504,0.00006304852,0.00004139416,0.0009492882,0.00007813558,0.0002817971,0.00019669656,0.0001162255,0.000030279634],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003640521,0.0001968822,0.6433843,0.000012468635,0.00006261354,0.000034364846,0.0003580582,0.00053607,0.35428098,0.00008888723,0.00032162314,0.0003597404],"study_design_scores_gemma":[0.00020485591,0.002790798,0.98849684,0.00005186316,0.00005571967,0.0001185885,0.00031574513,0.000022529288,0.0066841007,0.000030902425,0.001015325,0.00021275382],"about_ca_topic_score_codex":0.0058234385,"about_ca_topic_score_gemma":0.03065215,"teacher_disagreement_score":0.34759688,"about_ca_system_score_codex":0.00024959398,"about_ca_system_score_gemma":0.000011999552,"threshold_uncertainty_score":0.98703593},"labels":[],"label_agreement":null},{"id":"W4224325453","doi":"10.3390/v14040657","title":"HBsAg Loss as a Treatment Endpoint for Chronic HBV Infection: HBV Cure","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Ottawa","funders":"","keywords":"HBsAg; Medicine; Virology; Hepatitis B virus; Chronic hepatitis; Clinical endpoint; Immunology; Internal medicine; Virus; Clinical trial","score_opus":0.18874621045255444,"score_gpt":0.43528152314773505,"score_spread":0.24653531269518061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224325453","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000042455664,0.99155694,0.000017498742,0.000124526,0.0010237126,0.003684133,0.0007272837,0.00025972998,0.002563688],"genre_scores_gemma":[0.000016590131,0.98801005,0.00008485412,0.00041722655,0.0017898493,0.006070952,0.0003637214,0.0001736957,0.0030730614],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974326,0.00015799793,0.0007471798,0.00072228885,0.00038181088,0.0005581518],"domain_scores_gemma":[0.9981782,0.0004956864,0.000366478,0.00071486767,0.00006614894,0.00017864634],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019319064,0.00075184344,0.0025991218,0.00031791985,0.00038104464,0.00003738475,0.00014241804,0.00026804738,0.0038956967],"category_scores_gemma":[0.00030048745,0.0005624757,0.0011578926,0.00039831444,0.00011556717,0.00008039775,0.00018166155,0.00039439063,0.0008470917],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049391165,0.00038182983,0.00029131465,0.017325072,0.0018314184,0.00022281749,0.0001555863,5.197223e-7,8.3264115e-7,0.00033720536,0.012063197,0.9673408],"study_design_scores_gemma":[0.00092344,0.0026618831,0.00003468357,0.004180776,0.0037428068,0.00023547608,0.0000065773133,9.10371e-7,0.00002044211,0.000040553256,0.98770535,0.00044710422],"about_ca_topic_score_codex":0.0024751865,"about_ca_topic_score_gemma":0.0019528155,"teacher_disagreement_score":0.97564214,"about_ca_system_score_codex":0.0030610536,"about_ca_system_score_gemma":0.0016715936,"threshold_uncertainty_score":0.99993086},"labels":[],"label_agreement":null},{"id":"W4224325462","doi":"10.3390/v14040762","title":"Spatial and Temporal Pattern of Norovirus Dispersal in an Oyster Growing Region in the Northeast Pacific","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia; Ministry of Agriculture; Vancouver Island University","funders":"Genome British Columbia","keywords":"Oyster; Norovirus; Biological dispersal; Shellfish; Crassostrea; Contamination; Biology; Ecology; Environmental science; Fishery; Outbreak; Aquatic animal; Environmental health","score_opus":0.05341244177400368,"score_gpt":0.31824797165440455,"score_spread":0.2648355298804009,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224325462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99828404,0.00011156224,0.000059597496,0.0012252996,0.00004289438,0.00019774585,0.000021736625,0.0000061393125,0.000050974973],"genre_scores_gemma":[0.99860805,0.000028985456,0.000012816037,0.0012123755,0.00006215805,0.000037745314,0.000022211641,0.000008884439,0.0000067621254],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987498,0.00044485446,0.00023684718,0.00017018196,0.00017143736,0.0002268697],"domain_scores_gemma":[0.99969983,0.000033237622,0.0000424801,0.00016310492,0.00000964519,0.00005167456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004064864,0.00007419118,0.00021428471,0.00013571323,0.000043430846,0.0000074961313,0.000096117976,0.000022839782,0.000040507788],"category_scores_gemma":[0.000052615243,0.000053320557,0.000029909017,0.00010592872,0.00009308741,0.00011778406,0.00008009507,0.00024780454,0.0000014183361],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049273216,0.00013156942,0.98715425,0.000027041133,0.000004468388,0.00022298223,0.0008669168,0.000002958799,0.0017858176,0.0000069722814,0.00010119552,0.009203072],"study_design_scores_gemma":[0.0013483092,0.0015298792,0.9906288,0.00004969122,0.0000054734323,0.00014250116,0.00431493,0.00079389854,0.000035942907,0.000017160137,0.0010749209,0.000058492573],"about_ca_topic_score_codex":0.010366098,"about_ca_topic_score_gemma":0.0059986357,"teacher_disagreement_score":0.009144579,"about_ca_system_score_codex":0.000030415324,"about_ca_system_score_gemma":0.000020955547,"threshold_uncertainty_score":0.996224},"labels":[],"label_agreement":null},{"id":"W4224439950","doi":"10.3390/v14050886","title":"Isolation of a Human Betaretrovirus from Patients with Primary Biliary Cholangitis","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Canadian Liver Foundation","keywords":"Biology; Virus; Virology; Cancer; Breast cancer; Lymph node; Lymphatic system; Mouse mammary tumor virus; Immunology; Genetics","score_opus":0.018306331248696323,"score_gpt":0.24458858432486744,"score_spread":0.2262822530761711,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224439950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99816406,0.00024996046,0.000008788561,0.000015916556,0.000051775514,0.0001943621,0.0006268866,0.00003136563,0.00065688905],"genre_scores_gemma":[0.9983231,0.000007011006,0.00015418672,0.0007143422,0.000034904144,0.000014737756,0.0006944337,0.000014139347,0.00004318596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993515,0.00004842972,0.00013187199,0.00011854317,0.00026577347,0.000083856394],"domain_scores_gemma":[0.99955744,0.000029154053,0.00008129793,0.00023906116,0.0000465639,0.000046470443],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00003485747,0.00007067013,0.00015324516,0.00006600252,0.00012720528,0.0000052378714,0.00006728097,0.000015537407,0.0011836262],"category_scores_gemma":[0.000011040721,0.0000585806,0.00004455484,0.00012114772,0.000035868103,0.00011710338,0.0000869791,0.00011086555,0.0000070476844],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036957985,0.00046896245,0.98296505,0.000023449133,0.000078320874,0.000003917446,0.00018124025,0.0000019876,0.014501211,0.000008894771,0.00056478585,0.0008326242],"study_design_scores_gemma":[0.0015579172,0.0009995946,0.99456346,0.000024833615,0.00013242467,4.051827e-7,0.00010443829,0.0000037165564,0.0015159263,0.000029305593,0.0009992636,0.00006871147],"about_ca_topic_score_codex":0.0020050576,"about_ca_topic_score_gemma":0.00000611994,"teacher_disagreement_score":0.012985284,"about_ca_system_score_codex":0.00006302533,"about_ca_system_score_gemma":0.0000502943,"threshold_uncertainty_score":0.99972945},"labels":[],"label_agreement":null},{"id":"W4225373583","doi":"10.3390/v14050938","title":"The Isolation and Characterization of a Broad Host Range Bcep22-like Podovirus JC1","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences; Alberta Innovates; University of Alberta","keywords":"Isolation (microbiology); Biology; Host (biology); Computational biology; Virology; Microbiology; Genetics","score_opus":0.04007658289301153,"score_gpt":0.2545661023894796,"score_spread":0.21448951949646805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225373583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977479,0.00053137104,0.0000010136093,0.0006080876,0.00007015915,0.00016243258,0.0007414062,0.000023417193,0.00011420265],"genre_scores_gemma":[0.9984148,0.000989574,0.0000035853961,0.0002790347,0.00005294882,0.00004014222,0.000037673086,5.893834e-7,0.00018166035],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99926656,0.00012747855,0.00011866615,0.000120516364,0.000225313,0.00014144076],"domain_scores_gemma":[0.9995467,0.00028868267,0.00007448128,0.00003406873,0.000029570785,0.000026483574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002085676,0.000061945575,0.000085469175,0.000011087648,0.0007107018,0.000037745227,0.00013724001,0.00001593044,0.00012756472],"category_scores_gemma":[0.00005276343,0.000021222286,0.000023568373,0.00021731749,0.00008167277,0.000104507126,0.00019742255,0.00007397464,0.0000069843827],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007291614,0.000022296106,0.0062025622,0.000002240419,0.000009928762,8.180839e-7,0.00008281228,2.200967e-7,0.9818267,0.00009439245,0.00035907212,0.011326045],"study_design_scores_gemma":[0.00013174224,0.0002557325,0.75561136,0.0000058162595,0.000007949934,0.0000047345375,0.00035244497,0.000074289586,0.026323993,0.00006316839,0.21705833,0.000110409965],"about_ca_topic_score_codex":0.00035984302,"about_ca_topic_score_gemma":0.0002522408,"teacher_disagreement_score":0.9555027,"about_ca_system_score_codex":0.0000127594185,"about_ca_system_score_gemma":0.000003958144,"threshold_uncertainty_score":0.54662156},"labels":[],"label_agreement":null},{"id":"W4225709605","doi":"10.3390/v13122482","title":"Iron Related Biomarkers Predict Disease Severity in a Cohort of Portuguese Adult Patients during COVID-19 Acute Infection","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre hospitalier universitaire Sainte-Justine","keywords":"Medicine; Internal medicine; Ferritin; Coronavirus disease 2019 (COVID-19); Serum iron; Disease; Transferrin saturation; Severity of illness; Immune system; Transferrin; Immunology; Gastroenterology; Anemia; Serum ferritin; Infectious disease (medical specialty)","score_opus":0.02737765365649535,"score_gpt":0.37859723377639165,"score_spread":0.3512195801198963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225709605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764603,0.00014753996,0.000010508826,0.0010710995,0.00012179618,0.00061805994,0.00020738754,0.000085291635,0.00009225555],"genre_scores_gemma":[0.9947791,0.003412469,0.000025501107,0.0014111539,0.000026901482,0.00006317294,0.00010001297,0.000019179055,0.00016252759],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978777,0.00018847222,0.0005842435,0.00044382468,0.0006083684,0.0002973995],"domain_scores_gemma":[0.9976949,0.00091040257,0.00014486384,0.00040745738,0.0003144895,0.0005278473],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00035348936,0.0001594974,0.00040444674,0.00021762664,0.000076049786,0.0000071966124,0.000066396344,0.00010151408,0.00014679164],"category_scores_gemma":[0.0559384,0.00014419944,0.0001424747,0.0006890462,0.00021315795,0.00014775251,0.00024612044,0.00026428138,0.00001565912],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017278183,0.0008487488,0.99245304,0.0010853499,0.00035613545,0.00050341344,0.00011565471,0.000027118605,0.001864111,0.0000061302603,0.0004097504,0.0006027145],"study_design_scores_gemma":[0.00363429,0.00016495584,0.99374306,0.00026790772,0.00021496088,0.0000012938757,0.00001690803,0.00016615614,0.0010533113,0.000065198255,0.0005549476,0.00011702589],"about_ca_topic_score_codex":0.0018403841,"about_ca_topic_score_gemma":0.00020031177,"teacher_disagreement_score":0.05558491,"about_ca_system_score_codex":0.00042129328,"about_ca_system_score_gemma":0.00074749463,"threshold_uncertainty_score":0.95201385},"labels":[],"label_agreement":null},{"id":"W4226181264","doi":"10.3390/v14040817","title":"Novel Compound Inhibitors of HIV-1NL4-3 Vpu","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Tetherin; Virology; Biology; Function (biology); Infectivity; Virus; Cell biology; Viral replication","score_opus":0.036504287059690665,"score_gpt":0.28257561275827353,"score_spread":0.24607132569858287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226181264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99378884,0.0022426615,0.000025495996,0.00015711013,0.00030892837,0.0001493148,0.0010012381,0.00003676438,0.0022896351],"genre_scores_gemma":[0.998124,0.000021115678,0.000059932143,0.000111481604,0.000013756941,0.000040350744,0.00017561161,0.000008437358,0.0014452881],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99939215,0.00008490789,0.00014018017,0.00013460546,0.000046542642,0.00020162812],"domain_scores_gemma":[0.9996679,0.00009773844,0.000047353322,0.00015159202,0.000019563586,0.00001589508],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000097657045,0.00007483494,0.00013709637,0.00008545454,0.00020125802,0.0000038609455,0.00014085766,0.00003210505,0.002836651],"category_scores_gemma":[0.0000203847,0.00006500431,0.00005233438,0.000109369976,0.00013636792,0.000034326116,0.0001737685,0.00015375513,0.00097177253],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015875054,0.0006133861,0.013973408,0.000007485299,0.00017405694,0.000014233055,0.00024180768,0.000012300006,0.9550683,0.00081180234,0.02744231,0.0014821679],"study_design_scores_gemma":[0.0017335473,0.00040067465,0.0062243156,0.0000055354817,0.00001736487,0.00007143076,0.00033360295,5.4611326e-7,0.39895874,0.000049683524,0.59210783,0.00009675281],"about_ca_topic_score_codex":0.00027127552,"about_ca_topic_score_gemma":0.000016319944,"teacher_disagreement_score":0.5646655,"about_ca_system_score_codex":0.000038713973,"about_ca_system_score_gemma":0.00005957579,"threshold_uncertainty_score":0.9998061},"labels":[],"label_agreement":null},{"id":"W4229022573","doi":"10.3390/v14050958","title":"Evolutionary Dynamics of Mexican Lineage H5N2 Avian Influenza Viruses","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Canadian Science Centre for Human and Animal Health","funders":"Secretaría de Agricultura, Ganadería, Desarrollo Rural, Pesca y Alimentación; Canadian Food Inspection Agency","keywords":"Influenza A virus subtype H5N1; Biology; Virology; Lineage (genetic); Antigenic drift; Hemagglutinin (influenza); Virus; Clade; Gene; Genetics; Phylogenetics","score_opus":0.10350544374132384,"score_gpt":0.38880797728683864,"score_spread":0.2853025335455148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229022573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98449796,0.005215787,0.00004420579,0.0004394063,0.0002724404,0.0007165528,0.0010901737,0.0002238908,0.0074995523],"genre_scores_gemma":[0.9872092,0.00024676122,0.001138645,0.010133153,0.00024027981,0.0002210254,0.000050460378,0.00007617603,0.0006842705],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99746114,0.00016591058,0.0005433311,0.00034876078,0.0010078562,0.00047301786],"domain_scores_gemma":[0.9986292,0.00025392955,0.0001769773,0.000570481,0.00020462375,0.00016475866],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038700324,0.0002317341,0.00049362454,0.00041289045,0.00044718458,0.000011907978,0.00030251505,0.00006338509,0.0013816018],"category_scores_gemma":[0.0006050919,0.00021710641,0.00017600175,0.00068144454,0.00040572693,0.00015810822,0.0006682366,0.0005220111,0.00009451922],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039723874,0.0019417857,0.8945284,0.0006052946,0.0011995208,0.00031865676,0.0019264198,0.0012269405,0.048972078,0.01240751,0.027036052,0.0058649895],"study_design_scores_gemma":[0.0048817256,0.0025963706,0.23207252,0.00016744349,0.00031726732,0.00010816036,0.0037124408,0.0026301392,0.03177844,0.0007225698,0.7202318,0.0007811394],"about_ca_topic_score_codex":0.0009534095,"about_ca_topic_score_gemma":0.00009208341,"teacher_disagreement_score":0.69319576,"about_ca_system_score_codex":0.00045258418,"about_ca_system_score_gemma":0.00030572107,"threshold_uncertainty_score":0.99953127},"labels":[],"label_agreement":null},{"id":"W4229044055","doi":"10.3390/v14050968","title":"Flavivirus Capsid Proteins Inhibit the Interferon Response","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Alberta","funders":"Canadian Institutes of Health Research; University of Alberta; Cleveland Clinic","keywords":"Capsid; Biology; Interferon; Flavivirus; Virology; ISG15; Interferon-stimulated gene; Zika virus; Gene; Virus; Interactome; Cell biology; Ubiquitin; Immune system; Innate immune system; Genetics","score_opus":0.022749434297162082,"score_gpt":0.28304130988902615,"score_spread":0.26029187559186406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229044055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916244,0.0018721295,0.000024100023,0.0044682515,0.00019969982,0.0007951329,0.00008218373,0.00009894879,0.00083514827],"genre_scores_gemma":[0.98675215,0.000014902447,0.00001269701,0.010225564,0.00018370143,0.0005336638,0.0000076075576,0.000027748121,0.002241979],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987441,0.000260457,0.00019194714,0.00023236482,0.00033483093,0.0002363175],"domain_scores_gemma":[0.99920255,0.000111636204,0.00006264707,0.0004916356,0.000032162698,0.00009935554],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039720716,0.00012684896,0.00017467244,0.0000693983,0.00030240888,0.000030572457,0.0001808405,0.00002416865,0.0022827883],"category_scores_gemma":[0.00017026879,0.000085392545,0.00012175896,0.00018176541,0.00006142105,0.000051803036,0.00019210868,0.0002620455,0.00013725503],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.061862275,0.0013759602,0.009132879,0.00009690378,0.00036559784,0.0007015504,0.002491434,0.00008767202,0.7950423,0.0024768582,0.090752065,0.035614558],"study_design_scores_gemma":[0.0029312267,0.0025696214,0.021021476,0.000052017534,0.00023583205,0.00009573044,0.0015340524,0.00019230449,0.03219157,0.00017365199,0.9387426,0.00025991537],"about_ca_topic_score_codex":0.00025375508,"about_ca_topic_score_gemma":0.000026223288,"teacher_disagreement_score":0.8479905,"about_ca_system_score_codex":0.00008907332,"about_ca_system_score_gemma":0.00017252026,"threshold_uncertainty_score":0.9986293},"labels":[],"label_agreement":null},{"id":"W4229367780","doi":"10.3390/v14050975","title":"Development and Scalable Production of Newcastle Disease Virus-Vectored Vaccines for Human and Veterinary Use","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Mitacs; Canada Research Chairs","keywords":"Newcastle disease; Virology; Diva; Embryonated; Virus; Pandemic; Vector (molecular biology); Biology; Medicine; Disease; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Recombinant DNA","score_opus":0.28892640563594835,"score_gpt":0.41234446025917565,"score_spread":0.1234180546232273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229367780","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14168805,0.8569203,0.000001314866,0.000012437278,0.00015042536,0.001032655,0.0001516866,0.00003622105,0.000006882797],"genre_scores_gemma":[0.0008129282,0.9972991,0.00035506458,0.000099779216,0.00014306314,0.00045381312,0.00029759004,0.000047502785,0.0004911678],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99891156,0.000069436755,0.0003607476,0.00039499972,0.000104989995,0.00015827577],"domain_scores_gemma":[0.99932927,0.00009468118,0.00017721887,0.00022966719,0.000026170002,0.00014300279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010982617,0.00024965405,0.00080037955,0.00016860358,0.000197805,0.000014006931,0.000053219876,0.0000839163,0.00011106622],"category_scores_gemma":[0.00023952096,0.00020001731,0.000108991946,0.000103757324,0.00007838614,0.00012422487,0.0001213025,0.00010881888,0.0000022838565],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013151385,0.00068102253,0.0019237399,0.06643206,0.00064022344,0.00006805142,0.00013550189,2.6260952e-7,0.0010906652,0.0001448471,0.0026513902,0.9249171],"study_design_scores_gemma":[0.000368728,0.0003829745,0.0054580816,0.0018323793,0.001361057,0.000032120013,0.00001306077,4.391512e-7,0.00005365931,0.000020279642,0.9902923,0.0001849088],"about_ca_topic_score_codex":0.00002364575,"about_ca_topic_score_gemma":0.0000075388016,"teacher_disagreement_score":0.9876409,"about_ca_system_score_codex":0.000032539894,"about_ca_system_score_gemma":0.00018644612,"threshold_uncertainty_score":0.8156469},"labels":[],"label_agreement":null},{"id":"W4280513654","doi":"10.3390/v14051047","title":"SARS-CoV-2 Seroconversion in an Adult Horse with Direct Contact to a COVID-19 Individual","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse; National Institutes of Health","keywords":"Seroconversion; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Transmission (telecommunications); Horse; Coronavirus disease 2019 (COVID-19); Feces; Medicine; Viral load; Immunology; Viral shedding; Disease; Biology; Virus; Infectious disease (medical specialty); Internal medicine; Microbiology","score_opus":0.0904230067745237,"score_gpt":0.38462669859189375,"score_spread":0.29420369181737005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280513654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969061,0.00010484811,0.000019461339,0.0007909228,0.00008467953,0.0009752668,0.00011548384,0.00016286694,0.00084034086],"genre_scores_gemma":[0.71706706,0.0000016348342,0.00007849985,0.28249818,0.00006373658,0.00023197861,0.0000118291355,0.00003561131,0.000011453763],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974649,0.00025278528,0.00025815982,0.0005755197,0.0009426541,0.00050599],"domain_scores_gemma":[0.9990249,0.0001818635,0.00006256475,0.0004899076,0.00009156172,0.00014919572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051812123,0.00023219516,0.00039142574,0.00063234475,0.00022608203,0.00005728685,0.00035625626,0.000073460586,0.000083969346],"category_scores_gemma":[0.0003444875,0.00019798845,0.00006420126,0.001010386,0.0000636671,0.00022384827,0.00028688717,0.0004547487,0.000120686884],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00675197,0.00080000475,0.57245004,0.00013010838,0.000095509655,0.0013574138,0.0047825566,0.000010062872,0.40409198,0.00010242004,0.00771136,0.0017165506],"study_design_scores_gemma":[0.0067630475,0.005077097,0.017076178,0.00007875821,0.00007533084,0.00010687941,0.0032158669,0.00010749502,0.39605168,0.000031472344,0.5709655,0.00045068626],"about_ca_topic_score_codex":0.005772885,"about_ca_topic_score_gemma":0.0028852585,"teacher_disagreement_score":0.5632542,"about_ca_system_score_codex":0.0004852711,"about_ca_system_score_gemma":0.000896553,"threshold_uncertainty_score":0.8726914},"labels":[],"label_agreement":null},{"id":"W4280520268","doi":"10.3390/v14051029","title":"Understanding the Driving Forces That Trigger Mutations in SARS-CoV-2: Mutational Energetics and the Role of Arginine Blockers in COVID-19 Therapy","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Energetics; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Sars virus; Arginine; Virology; Mutation; Medicine; Biology; Genetics; Infectious disease (medical specialty); Disease; Gene; Internal medicine; Ecology; Amino acid; Outbreak","score_opus":0.12997835134986266,"score_gpt":0.37352520274565076,"score_spread":0.2435468513957881,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280520268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99286956,0.0025646887,0.0002495089,0.0033427605,0.000044598928,0.0005127683,0.000014581553,0.000019020696,0.00038253117],"genre_scores_gemma":[0.97178215,0.000082882616,0.000037987294,0.027884886,0.000027532884,0.00015855582,0.0000034934098,0.000017196406,0.000005335703],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985171,0.0002784608,0.00027037895,0.00019702718,0.0005144986,0.00022253922],"domain_scores_gemma":[0.9978854,0.0017879454,0.00009660608,0.00018567049,0.000025663012,0.000018698347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009812657,0.000117347525,0.00022881207,0.00033856241,0.00026501642,0.000036728885,0.00017608191,0.000036729325,0.00002538945],"category_scores_gemma":[0.00036648448,0.000073376425,0.00006272876,0.0006357309,0.00041609522,0.00009192514,0.000092932125,0.00028955957,9.648263e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030050562,0.00043277346,0.7541591,0.00007046496,0.00024071452,0.00009459067,0.034162387,0.0010586552,0.17910519,0.025338687,0.00041397748,0.0019183942],"study_design_scores_gemma":[0.033622008,0.0007177651,0.020012168,0.00018369424,0.00013764239,0.00017202827,0.13843593,0.028522162,0.49967757,0.08914295,0.18876009,0.00061599177],"about_ca_topic_score_codex":0.0010582169,"about_ca_topic_score_gemma":0.0007389945,"teacher_disagreement_score":0.73414695,"about_ca_system_score_codex":0.00023842989,"about_ca_system_score_gemma":0.0004088185,"threshold_uncertainty_score":0.29922038},"labels":[],"label_agreement":null},{"id":"W4281488029","doi":"10.3390/v14061122","title":"Decades of Genetic Research on Soybean mosaic virus Resistance in Soybean","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Soybean mosaic virus; Biology; Mosaic; Resistance (ecology); Mosaic virus; Virology; Plant virus; Virus; Agronomy; Biotechnology; Potyvirus; Geography","score_opus":0.23513428206334544,"score_gpt":0.3844314426021744,"score_spread":0.14929716053882894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281488029","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015471001,0.9820672,8.60114e-8,0.000022727838,0.00010661821,0.0006096684,0.00042601727,0.000026562926,0.0012701163],"genre_scores_gemma":[0.00076254905,0.998275,0.000049464365,0.00006477599,0.0001956601,0.00017864327,0.00018687686,0.000006200499,0.0002808272],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969317,0.00070953084,0.00066245906,0.00058137235,0.00069779635,0.00041714867],"domain_scores_gemma":[0.9983026,0.0011039234,0.00027743957,0.00018984226,0.000051090632,0.00007509869],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007503256,0.00028244941,0.000738067,0.00013199267,0.00021979489,0.000050986117,0.00072728324,0.0002117764,0.0009946739],"category_scores_gemma":[0.00017686555,0.00011929577,0.00022039669,0.0016319397,0.00012304055,0.000037173362,0.00018796064,0.0005394257,0.00006622322],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035702218,0.00029455064,0.00018304451,0.0010342684,0.00003539014,0.000018220506,0.00009418536,0.0000020379896,0.0011307587,0.0008822386,0.0062644244,0.99002516],"study_design_scores_gemma":[0.00005519054,0.00020805214,0.0009421702,0.0014017954,0.000023389463,9.183815e-7,0.00012999469,5.0793716e-7,0.00019792371,0.0005712237,0.99622697,0.00024188058],"about_ca_topic_score_codex":0.0003581709,"about_ca_topic_score_gemma":0.0014683686,"teacher_disagreement_score":0.9899625,"about_ca_system_score_codex":0.000123092,"about_ca_system_score_gemma":0.000060284678,"threshold_uncertainty_score":0.9999186},"labels":[],"label_agreement":null},{"id":"W4281631023","doi":"10.3390/v14061164","title":"The Penis, the Vagina and HIV Risk: Key Differences (Aside from the Obvious)","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Genital Health and Disease","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Toronto; University Health Network","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs","keywords":"Aside; Penis; Vagina; Key (lock); Human immunodeficiency virus (HIV); Medicine; Anatomy; Biology; Virology; Art; Ecology","score_opus":0.10898522435348935,"score_gpt":0.36118253675166895,"score_spread":0.2521973123981796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281631023","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019137794,0.9936142,5.874636e-7,0.0008552898,0.00038450197,0.0011343239,0.00077702105,0.00004464206,0.0012756694],"genre_scores_gemma":[0.0017358941,0.994628,0.0000068361805,0.0019993817,0.0005232509,0.0003163669,0.000075943724,0.00003581675,0.00067849853],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977849,0.0007608307,0.00038814874,0.00033642983,0.00039449308,0.0003351925],"domain_scores_gemma":[0.99407077,0.0046072686,0.00027525326,0.000800407,0.000020584695,0.0002257208],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00044864713,0.00032380025,0.00068777497,0.000028600663,0.0014095376,0.00011285438,0.00048666325,0.00008676339,0.0004999536],"category_scores_gemma":[0.0007717951,0.000112946705,0.00024504765,0.00017338325,0.00027410782,0.000031141302,0.00023691921,0.0008930009,0.00017093522],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081094186,0.00005852352,0.0053874175,0.0018174315,0.00013247605,0.000032877804,0.00044782757,2.311721e-8,4.8305907e-8,0.00019650244,0.028656704,0.96318907],"study_design_scores_gemma":[0.00019632325,0.000069180576,0.0058872406,0.00047403635,0.0016976026,0.000021789485,0.0005455295,0.0000014016638,1.2936567e-7,0.00040401428,0.9905718,0.00013092815],"about_ca_topic_score_codex":0.0014959906,"about_ca_topic_score_gemma":0.00027016771,"teacher_disagreement_score":0.9630582,"about_ca_system_score_codex":0.000038517202,"about_ca_system_score_gemma":0.0005720823,"threshold_uncertainty_score":0.9998905},"labels":[],"label_agreement":null},{"id":"W4281766760","doi":"10.3390/v14061218","title":"Non-Productive Infection of Glial Cells with SARS-CoV-2 in Hamster Organotypic Cerebellar Slice Cultures","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Virology; Biology; Hamster; Pathogenesis; Viral replication; Phenotype; Virus; Immunology; Genetics; Gene; Molecular biology","score_opus":0.017187437635114926,"score_gpt":0.3008747182335811,"score_spread":0.28368728059846615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281766760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99785054,0.00007800794,0.00004112471,0.00029821275,0.00030466542,0.00079094834,0.000017618233,0.00005611861,0.0005627758],"genre_scores_gemma":[0.9969363,0.000015542872,0.00021528063,0.002410914,0.00019435928,0.0000590295,0.00001003694,0.00003662835,0.000121912104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874604,0.0001007981,0.00022554232,0.0003447472,0.00037218092,0.00021067497],"domain_scores_gemma":[0.9992891,0.0000942802,0.00013725695,0.00035522706,0.000083212755,0.000040905936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020478762,0.00017754102,0.00032923336,0.00023150448,0.00008422565,0.000012810922,0.000105426145,0.000058889214,0.0001574185],"category_scores_gemma":[0.000116931384,0.00014212371,0.00005404555,0.0005068952,0.00008939513,0.00016659511,0.000114531205,0.0002914727,0.000032877906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013701669,0.0003542668,0.12007661,0.0002899489,0.0000825998,0.00006741898,0.0017179169,0.00035352164,0.87228715,0.00003374608,0.003185869,0.00018078016],"study_design_scores_gemma":[0.0021809512,0.00114021,0.05037136,0.00008728285,0.000098332224,0.000036092988,0.00008949531,0.000025653611,0.93444514,0.00004567843,0.011302844,0.00017696002],"about_ca_topic_score_codex":0.0027180866,"about_ca_topic_score_gemma":0.00038114557,"teacher_disagreement_score":0.06970525,"about_ca_system_score_codex":0.00018967513,"about_ca_system_score_gemma":0.00017445484,"threshold_uncertainty_score":0.5795637},"labels":[],"label_agreement":null},{"id":"W4281833921","doi":"10.3390/v14061143","title":"NK Cells in Protection from HIV Infection","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Major histocompatibility complex; Biology; Priming (agriculture); NK-92; Immunology; Antigen; MHC class I; Innate immune system; Immune system; Interleukin 21; Interleukin 12; Cell; Virology; Cytotoxic T cell; T cell; In vitro; Genetics","score_opus":0.07614060760846797,"score_gpt":0.3004144096202007,"score_spread":0.22427380201173275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281833921","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009600618,0.9861466,0.0000460814,0.0000040838586,0.011549537,0.00066102255,0.000048072,0.00013403074,0.0013145234],"genre_scores_gemma":[0.000019575042,0.9918514,0.0000030376827,0.00009074703,0.000093545845,0.00044130004,0.00081937807,0.000041088548,0.0066399383],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99819595,0.0006639406,0.00051279063,0.00038815162,0.000032858847,0.0002063048],"domain_scores_gemma":[0.9992246,0.00015107427,0.00032524866,0.00027734204,0.00001313666,0.000008587415],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00015693618,0.00028777466,0.0007001695,0.0004388929,0.000159481,0.0000236284,0.00012366896,0.0004570145,0.021895867],"category_scores_gemma":[0.00005605842,0.0002633689,0.0002637485,0.00030338654,0.000034954843,0.00016610444,0.00008848361,0.0011032994,0.007325981],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006607442,0.00019972367,0.0000115280245,0.0008687715,0.00020824489,0.000003763707,0.000073022944,0.0000031542006,0.0042864666,0.000018151615,0.017694397,0.9765667],"study_design_scores_gemma":[0.00024339758,0.000079766134,0.00000952541,0.000939438,0.00014561754,0.000020986667,0.000020461242,4.9317833e-7,0.0018725786,0.0000068805,0.9964178,0.00024305409],"about_ca_topic_score_codex":0.0028101162,"about_ca_topic_score_gemma":0.000073388845,"teacher_disagreement_score":0.9787234,"about_ca_system_score_codex":0.00030928143,"about_ca_system_score_gemma":0.000088217326,"threshold_uncertainty_score":0.9999819},"labels":[],"label_agreement":null},{"id":"W4282048666","doi":"10.3390/v14061206","title":"D2I and F9Y Mutations in the NS1 Protein of Influenza A Virus Affect Viral Replication via Regulating Host Innate Immune Responses","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"State Key Laboratory of Veterinary Biotechnology; National Natural Science Foundation of China; University of Ottawa; National Key Research and Development Program of China; University of Wisconsin-Madison","keywords":"Biology; Virology; Virus; Viral replication; Influenza A virus; Innate immune system; Interferon; Mutant; Mutation; Immune system; Gene; Immunology; Genetics","score_opus":0.08926341064327281,"score_gpt":0.3981942199604556,"score_spread":0.3089308093171828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282048666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947499,0.002608893,0.000012946077,0.0005987517,0.000019101399,0.0016111686,0.00008063997,0.00004939652,0.0002692082],"genre_scores_gemma":[0.99746174,0.000042260002,0.00031027824,0.0010547802,0.000032848267,0.0009802519,0.000010075056,0.000024383166,0.00008338049],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99762785,0.0006828475,0.0005040693,0.00032709853,0.0005759323,0.00028217005],"domain_scores_gemma":[0.9983857,0.0005854635,0.00022077048,0.00066342123,0.00010633426,0.0000382616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018495038,0.00015848098,0.00030962532,0.0003852334,0.00042964277,0.00002639724,0.00018910602,0.000042307474,0.000047736292],"category_scores_gemma":[0.002525329,0.00012219042,0.000060897535,0.0007604967,0.00028968722,0.00016874066,0.00029417386,0.0004062229,0.000006869197],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019249384,0.00019283652,0.021291254,0.0001406853,0.000071092,0.00002340439,0.0045053586,0.000052848885,0.96747655,0.00056668237,0.00007582229,0.0036785542],"study_design_scores_gemma":[0.0030172707,0.0015120397,0.617351,0.00023940337,0.00008029205,0.00006818322,0.0027615118,0.0005165648,0.36296818,0.0007399216,0.0104699265,0.00027571648],"about_ca_topic_score_codex":0.0014449464,"about_ca_topic_score_gemma":0.000073746305,"teacher_disagreement_score":0.60450834,"about_ca_system_score_codex":0.00011510818,"about_ca_system_score_gemma":0.0001146699,"threshold_uncertainty_score":0.49827808},"labels":[],"label_agreement":null},{"id":"W4282568486","doi":"10.3390/v14061243","title":"Natural Immunity against HIV-1: Progression of Understanding after Association Studies","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Human immunodeficiency virus (HIV); Immunity; Immunology; Relevance (law); Cohort; Biology; Medicine; Demography; Immune system; Internal medicine","score_opus":0.18011140738792603,"score_gpt":0.4127733554420915,"score_spread":0.23266194805416546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282568486","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026325887,0.99768883,6.6726346e-7,0.000014132548,0.00055540947,0.0005056198,0.0006100856,0.00003932535,0.00032265604],"genre_scores_gemma":[0.0013774459,0.9962977,0.000009551381,0.000023856233,0.000020369916,0.00030597317,0.00096043485,0.000022539527,0.0009821224],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99806005,0.00090917904,0.00038490669,0.00022668095,0.00009847954,0.00032068102],"domain_scores_gemma":[0.9981311,0.0011590671,0.00041319424,0.00024391284,0.0000385646,0.000014143565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039181818,0.00025264308,0.001000555,0.00021030802,0.00026330524,0.000011258576,0.00019269466,0.00021736676,0.0005572518],"category_scores_gemma":[0.00043686412,0.00017240185,0.00029725538,0.0002079488,0.00012029653,0.00006888876,0.0003089591,0.0006522006,0.00041012958],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017471689,0.0004739789,0.0006900498,0.007613867,0.007926994,0.00006004868,0.0006723913,1.18022605e-7,0.0001320872,0.00011360051,0.01351404,0.9686281],"study_design_scores_gemma":[0.00032486298,0.000125662,0.000016595024,0.002421712,0.0003648377,0.000004882802,0.0003772424,1.3670066e-8,0.00007357878,0.000015795918,0.99612635,0.00014847922],"about_ca_topic_score_codex":0.000012622673,"about_ca_topic_score_gemma":0.000012177623,"teacher_disagreement_score":0.9826123,"about_ca_system_score_codex":0.001281528,"about_ca_system_score_gemma":0.00017571506,"threshold_uncertainty_score":0.70303434},"labels":[],"label_agreement":null},{"id":"W4282831456","doi":"10.3390/v14061237","title":"SARS-CoV-2 Accessory Protein ORF8 Decreases Antibody-Dependent Cellular Cytotoxicity","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation; Fondation du CHUM","keywords":"Antibody-dependent cell-mediated cytotoxicity; Immune system; Peripheral blood mononuclear cell; Antibody; Cytotoxic T cell; CD16; Cytotoxicity; CD8; Biology; Immunology; Biochemistry; In vitro; CD3","score_opus":0.08194239692551844,"score_gpt":0.3797104587425944,"score_spread":0.29776806181707594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282831456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935135,0.0013546007,0.0001277415,0.00016228667,0.00014552377,0.0012556837,0.000076949334,0.0002814409,0.0030822433],"genre_scores_gemma":[0.94235015,0.000006480383,0.00010221184,0.056691546,0.0002544302,0.00040959462,0.000013692147,0.00007185165,0.00010002234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967339,0.00026964568,0.0004013605,0.0006343026,0.0013145425,0.00064625003],"domain_scores_gemma":[0.9987941,0.00012320011,0.00012470264,0.0007652683,0.0001197474,0.00007298938],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005885267,0.0003008163,0.00045804612,0.00036859783,0.00044655573,0.00009170788,0.000546204,0.000101404126,0.00029288238],"category_scores_gemma":[0.00036645465,0.00027624678,0.0001957726,0.00061168603,0.00015621311,0.00022782593,0.00064294477,0.00063516013,0.00034749077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000748112,0.00078829285,0.03331309,0.00013546231,0.00009761086,0.0009049924,0.000102599945,6.3356873e-7,0.9620567,0.00022727829,0.0010513727,0.00057386176],"study_design_scores_gemma":[0.0012718926,0.00044533904,0.0011965671,0.00004667581,0.000047744874,0.000056664223,0.00014658998,0.000052927626,0.834151,0.0002449609,0.16208518,0.00025443448],"about_ca_topic_score_codex":0.0019246944,"about_ca_topic_score_gemma":0.000068650916,"teacher_disagreement_score":0.16103381,"about_ca_system_score_codex":0.00027715374,"about_ca_system_score_gemma":0.00061706075,"threshold_uncertainty_score":0.99996895},"labels":[],"label_agreement":null},{"id":"W4282969700","doi":"10.3390/v14061291","title":"Canid herpesvirus 1 Preferentially Infects Polarized Madin-Darby Canine Kidney Cells from the Basolateral Surface","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Cell polarity; Virology; Epithelial polarity; Virus; Cell biology; Biology; Cell culture; Apical membrane; Epithelium; Cell; Titer; Chemistry; Biochemistry","score_opus":0.023003514106687585,"score_gpt":0.26163916235977663,"score_spread":0.23863564825308906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282969700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926112,0.00036374218,0.00005543653,0.0006255275,0.0011988562,0.0006835382,0.0014457175,0.00020530865,0.0028106277],"genre_scores_gemma":[0.9891649,0.00007692424,0.0003014038,0.008003253,0.00024320919,0.000079957026,0.00021563336,0.000070565104,0.0018441397],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980571,0.0002848186,0.00034302386,0.00043518603,0.00043561106,0.00044423155],"domain_scores_gemma":[0.99868625,0.00017762292,0.00012946046,0.0006348967,0.00006110178,0.00031066942],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001943288,0.0003134024,0.00039216783,0.000068995156,0.00070202537,0.00008410097,0.00021153808,0.000086056,0.010339292],"category_scores_gemma":[0.00006762223,0.00022667264,0.00016568428,0.00036584405,0.00007239449,0.00012997942,0.00024635735,0.0005153313,0.00036658833],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019681326,0.0030046739,0.3429503,0.00006166531,0.0031151616,0.00044413845,0.0019555325,0.00045572047,0.5457308,0.00043894543,0.08900969,0.01086517],"study_design_scores_gemma":[0.004800322,0.000707211,0.023199158,0.00005498275,0.00059218303,0.000036747908,0.000092815455,0.00016092203,0.06784939,0.00011613436,0.9019932,0.00039689487],"about_ca_topic_score_codex":0.054395687,"about_ca_topic_score_gemma":0.0015179268,"teacher_disagreement_score":0.8129836,"about_ca_system_score_codex":0.0003064213,"about_ca_system_score_gemma":0.00054002897,"threshold_uncertainty_score":0.9905654},"labels":[],"label_agreement":null},{"id":"W4283166201","doi":"10.3390/v14061335","title":"Exploring the Mumps Virus Glycoproteins: A Review","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"","keywords":"Glycoprotein; Mumps virus; Virology; Biology; Mumps vaccine; Antibody; Virus; Immunity; Genotype; Strain (injury); Immunology; Vaccination; Immune system; Genetics; Gene","score_opus":0.4993392086191412,"score_gpt":0.4222104299588568,"score_spread":0.07712877866028439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283166201","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010513404,0.99568766,7.889422e-7,0.00017601882,0.00043912884,0.0021740133,0.00014366681,0.00015996523,0.0012082144],"genre_scores_gemma":[8.6602955e-7,0.9849247,0.000012949883,0.009907583,0.00045817893,0.0041250805,0.000112322115,0.00008527089,0.00037305214],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977437,0.00046233792,0.0006172917,0.00047031092,0.0003634519,0.00034286748],"domain_scores_gemma":[0.99827117,0.00030742414,0.00027862724,0.0009889907,0.00001850407,0.00013527916],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00039167303,0.00045685415,0.0018433831,0.00013140499,0.00031100452,0.000016652366,0.0004223062,0.0001001787,0.0048399684],"category_scores_gemma":[0.000641889,0.00025745956,0.0008936763,0.000522661,0.00013504327,0.00014414833,0.00026760876,0.00090119685,0.0012204605],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000254645,0.00009970948,0.0000013872843,0.057087284,0.0002844929,0.00017769805,0.000011570066,1.941321e-8,9.2140306e-7,0.000119350865,0.008416847,0.93377525],"study_design_scores_gemma":[0.00012743253,0.00017158994,0.000010911787,0.04418697,0.0043221097,0.00016971235,0.000008639351,6.6868495e-8,0.0000021556739,0.000013830466,0.9507479,0.00023870215],"about_ca_topic_score_codex":0.00007266616,"about_ca_topic_score_gemma":0.000005533573,"teacher_disagreement_score":0.942331,"about_ca_system_score_codex":0.00009340378,"about_ca_system_score_gemma":0.00036394212,"threshold_uncertainty_score":0.9999878},"labels":[],"label_agreement":null},{"id":"W4283359625","doi":"10.3390/v14071363","title":"Increased Serum Mir-150-3p Expression Is Associated with Radiological Lung Injury Improvement in Patients with COVID-19","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"microRNA; TaqMan; Lung; Coronavirus disease 2019 (COVID-19); Medicine; Pneumonia; Real-time polymerase chain reaction; Pathology; Internal medicine; Gene; Bioinformatics; Biology; Disease; Genetics; Infectious disease (medical specialty)","score_opus":0.009901970942166606,"score_gpt":0.25071325726323246,"score_spread":0.24081128632106585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283359625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987149,0.00013035884,0.00006455385,0.000050421586,0.000029747738,0.0004486455,0.00051974616,0.000022770128,0.000018839703],"genre_scores_gemma":[0.99648917,0.000006954901,0.0000720343,0.0025392186,0.00002279763,0.00011485221,0.00070363045,0.000021613485,0.00002972027],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988122,0.00017496449,0.00017431789,0.00037585752,0.0002430749,0.0002195691],"domain_scores_gemma":[0.99942106,0.00001828336,0.00014318187,0.000259443,0.000039248913,0.0001187776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015326755,0.00015601564,0.00014186202,0.00005909948,0.00014450046,0.000014549949,0.0001506455,0.00008133416,0.00022942579],"category_scores_gemma":[0.000096889766,0.00011045823,0.000032235508,0.00014917577,0.00005257923,0.000006964965,0.00018626676,0.00009784095,0.0000012158034],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017402236,0.00042578287,0.50755334,0.000013702105,0.000063473395,0.0000071677455,0.000057517296,0.0002270367,0.48421597,0.0000020655443,0.0055318703,0.0001618357],"study_design_scores_gemma":[0.0063696634,0.0026775033,0.622472,0.000041834366,0.000056313256,0.0000021213218,0.00010360823,0.00009133506,0.35419026,0.000023524586,0.013406141,0.00056574057],"about_ca_topic_score_codex":0.00007293004,"about_ca_topic_score_gemma":0.000020790063,"teacher_disagreement_score":0.13002571,"about_ca_system_score_codex":0.00018577978,"about_ca_system_score_gemma":0.00016157841,"threshold_uncertainty_score":0.4504356},"labels":[],"label_agreement":null},{"id":"W4283394762","doi":"10.3390/v14071366","title":"Identifying Endogenous Cellular Proteins Destabilizing the Propagation of Swi1 Prion upon Overproduction","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; University of Toronto; National Institutes of Health; National Science Foundation","keywords":"Overproduction; SWI/SNF; Protein subunit; Chromatin remodeling; Suppressor; SMARCA4; Biology; Cell biology; Chromatin; Chemistry; Genetics; Gene","score_opus":0.04166337920419386,"score_gpt":0.2593914107555456,"score_spread":0.21772803155135176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283394762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873789,0.009663387,0.0019719007,0.000061324994,0.00017225684,0.000644817,0.00001928399,0.00001671027,0.000071435155],"genre_scores_gemma":[0.99890643,0.00035583094,0.00025610457,0.00008240293,0.00015918505,0.00016569758,0.00003953336,0.000017809058,0.00001702037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990519,0.00016279194,0.000186434,0.00024367924,0.00021396561,0.00014122899],"domain_scores_gemma":[0.99944586,0.000008738588,0.00015816758,0.00031675922,0.000044902994,0.000025550593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003779635,0.00009038642,0.00007659194,0.00003691069,0.00036119466,0.000022547883,0.00017614485,0.000029937628,0.00008088596],"category_scores_gemma":[0.0000976663,0.000076625096,0.00007334577,0.00012974438,0.000032204483,0.000009169535,0.00020369019,0.00008377558,0.0000022510785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094535375,0.000056976285,0.0006284765,0.00004085223,0.00001949579,0.0000013556048,0.00011601305,0.0006066198,0.9850959,0.00017785787,0.000031154086,0.013130719],"study_design_scores_gemma":[0.00015474609,0.00017764041,0.00037233258,0.000010440951,0.000021084368,0.0000118839125,0.00028387955,0.000052647523,0.98421276,0.00015651458,0.014447857,0.000098234465],"about_ca_topic_score_codex":0.00010619455,"about_ca_topic_score_gemma":0.000008343643,"teacher_disagreement_score":0.014416702,"about_ca_system_score_codex":0.000029177805,"about_ca_system_score_gemma":0.000079027755,"threshold_uncertainty_score":0.31246805},"labels":[],"label_agreement":null},{"id":"W4283451895","doi":"10.3390/v14061152","title":"CAVES: A Novel Tool for Comparative Analysis of Variant Epitope Sequences","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Epitope; Computer science; Computational biology; Cave; In silico; Source code; Biology; Data mining; Antigen; Genetics; Ecology; Programming language; Gene","score_opus":0.05534817480204814,"score_gpt":0.3025779691161971,"score_spread":0.24722979431414896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283451895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99162084,0.00058434746,0.0065614413,0.000029592093,0.0000620749,0.00021004785,0.0006355671,0.0000045941642,0.00029150263],"genre_scores_gemma":[0.99655205,0.000039206763,0.0027191308,0.00024200256,0.000026126701,0.000096962445,0.00023547445,0.000004621373,0.00008441554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994343,0.000018797222,0.00022674678,0.00012871543,0.00008267359,0.000108770124],"domain_scores_gemma":[0.9995778,0.000023135766,0.00013385498,0.00020150833,0.00004851733,0.000015187147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016065287,0.00008114137,0.00020092673,0.00007753605,0.000108454515,0.000012899463,0.00017337989,0.000024810672,0.00004560499],"category_scores_gemma":[0.000024973393,0.0000707489,0.00013355199,0.00023622102,0.000026372072,0.000004796953,0.00011794609,0.00003244121,5.420876e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015877814,0.00018327091,0.001634813,0.000029127594,0.0018765265,3.046154e-7,0.00084671983,0.012879806,0.9779544,0.0027446758,0.0012569505,0.00043464842],"study_design_scores_gemma":[0.0018523558,0.0015833301,0.008020434,0.000009086413,0.0014221846,0.000016708798,0.0067827925,0.03154954,0.7232222,0.0001559217,0.22472747,0.00065800804],"about_ca_topic_score_codex":0.00007226468,"about_ca_topic_score_gemma":0.00001568568,"teacher_disagreement_score":0.2547322,"about_ca_system_score_codex":0.000008023557,"about_ca_system_score_gemma":0.0000513392,"threshold_uncertainty_score":0.28850564},"labels":[],"label_agreement":null},{"id":"W4283592354","doi":"10.3390/v14071380","title":"Characterization of Xanthomonas arboricola pv. juglandis Bacteriophages against Bacterial Walnut Blight and Field Evaluation","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Comisión Nacional de Investigación Científica y Tecnológica; Directorate for Biological Sciences; Genome Atlantic; Natural Sciences and Engineering Research Council of Canada; Universidad de Chile; Atlantic Canada Opportunities Agency","keywords":"Blight; Biology; Bacteriophage; Botany; Escherichia coli; Gene","score_opus":0.04087722351339614,"score_gpt":0.2727269449003939,"score_spread":0.23184972138699775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283592354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99766856,0.00016997292,4.3449967e-7,0.00041198573,0.0001911936,0.00029745724,0.0010445791,0.000027879598,0.0001879264],"genre_scores_gemma":[0.9984519,0.00053103414,0.000006567535,0.00025042225,0.00018020757,0.00009092605,0.00041583838,0.0000010303912,0.000072069444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879044,0.00022194054,0.0001915611,0.0002110577,0.00040924625,0.00017574715],"domain_scores_gemma":[0.9995002,0.00023279901,0.0001142634,0.000045670236,0.000060576403,0.000046479516],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038354885,0.0001037151,0.00016742432,0.000030255333,0.00033383985,0.00004772181,0.00014681538,0.000034897603,0.0011167226],"category_scores_gemma":[0.00013206864,0.000046754307,0.000033803968,0.0002405469,0.000039853116,0.00017987091,0.00022147389,0.000088099,0.0000051197044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001089517,0.0000576557,0.0030496377,0.000006602694,0.000016735525,0.0000024878764,0.00013131466,6.6127694e-7,0.9720704,0.000014904082,0.0002688527,0.024271796],"study_design_scores_gemma":[0.0003215754,0.0005031636,0.32492855,0.000015948699,0.000023517496,0.0000036381196,0.00017105957,0.00010654365,0.6099866,0.000037013237,0.06371191,0.00019044189],"about_ca_topic_score_codex":0.00012335704,"about_ca_topic_score_gemma":0.00010080375,"teacher_disagreement_score":0.36208376,"about_ca_system_score_codex":0.000026891683,"about_ca_system_score_gemma":0.000015754975,"threshold_uncertainty_score":0.9997964},"labels":[],"label_agreement":null},{"id":"W4283766652","doi":"10.3390/v14071437","title":"HPLC-Based Purification and Isolation of Potent Anti-HIV and Latency Reversing Daphnane Diterpenes from the Medicinal Plant Gnidia sericocephala (Thymelaeaceae)","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Center for AIDS Research, University of Washington; National Institutes of Health; New Partnership for Africa's Development; Department of Science and Technology, Ministry of Science and Technology, India; Department of Science and Technology, Republic of South Africa; Government of the United Kingdom; Department of Science and Innovation, South Africa; Alliance for Accelerating Excellence in Science in Africa; African Academy of Sciences; Canadian Institutes of Health Research; Philadelphia Foundation; Wellcome Trust; University of Pennsylvania","keywords":"Provirus; Peripheral blood mononuclear cell; Virology; Virus latency; Viral replication; Latency (audio); Virus; Entry inhibitor; In vitro; Biology; Human immunodeficiency virus (HIV); Pharmacology; Medicine; Viral entry; Biochemistry","score_opus":0.02173240569814155,"score_gpt":0.24080222477605295,"score_spread":0.2190698190779114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283766652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98895,0.008918883,0.000095842224,0.0009712359,0.00009646511,0.00020247162,0.0006929044,0.000015916288,0.000056249923],"genre_scores_gemma":[0.9986377,0.0004865792,0.00009643877,0.00013200339,0.000014275173,0.000018967872,0.0005586596,0.0000058817873,0.000049488393],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925166,0.00023157944,0.00014670513,0.00017611918,0.000058329733,0.00013560495],"domain_scores_gemma":[0.99949294,0.00024534852,0.00008447389,0.00013933388,0.00001963399,0.000018246277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017645591,0.00008457705,0.00013532367,0.000052734882,0.0003745145,0.000009615737,0.00007898168,0.00003898978,0.00020794327],"category_scores_gemma":[0.00002913369,0.000058132413,0.00002007607,0.00007703165,0.00017906413,0.000059618327,0.000060504077,0.00012334288,0.000017268185],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005781116,0.00027320746,0.41222623,0.000024562436,0.00020738787,0.000018743065,0.0016329242,0.000027778058,0.56967306,0.00019151812,0.0023169646,0.012829536],"study_design_scores_gemma":[0.0025965672,0.00060590694,0.8782284,0.00006398577,0.0001285169,0.000047940393,0.0014889844,0.00012867492,0.08662782,0.0001064623,0.02981493,0.00016181076],"about_ca_topic_score_codex":0.0007812905,"about_ca_topic_score_gemma":0.000024660581,"teacher_disagreement_score":0.48304522,"about_ca_system_score_codex":0.000019417348,"about_ca_system_score_gemma":0.00003620159,"threshold_uncertainty_score":0.28805006},"labels":[],"label_agreement":null},{"id":"W4285093040","doi":"10.3390/v14071517","title":"Distinct Antibody Responses to Endemic Coronaviruses Pre- and Post-SARS-CoV-2 Infection in Kenyan Infants and Mothers","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; University of Washington; Fred Hutchinson Cancer Research Center","keywords":"Seroconversion; Antibody; Betacoronavirus; Virology; Immunology; Medicine; Coronavirus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Titer; Antibody titer; Biology; Coronavirus disease 2019 (COVID-19); Disease; Internal medicine; Infectious disease (medical specialty)","score_opus":0.054790863649510475,"score_gpt":0.39479960963028954,"score_spread":0.34000874598077907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285093040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977497,0.00081167714,0.000010299006,0.00014110998,0.00010308366,0.00065188046,0.00009403614,0.00009935193,0.00033888392],"genre_scores_gemma":[0.9596275,0.0000420721,0.000033156222,0.040067468,0.00005275126,0.00010685303,0.000004428685,0.00003907386,0.000026660462],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982898,0.00022585045,0.00027567436,0.0004523575,0.00039501194,0.00036127694],"domain_scores_gemma":[0.9992016,0.00034982257,0.00005885808,0.00028639392,0.00005239426,0.000050932096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004999647,0.00020200103,0.00030960713,0.0005616573,0.00019627012,0.00005389152,0.00010536347,0.00007023137,0.000019242523],"category_scores_gemma":[0.00070163666,0.00019104595,0.000038803955,0.00049377535,0.00014430124,0.00017959293,0.00030909595,0.00034978302,0.000018556855],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020371545,0.00009108796,0.5391055,0.00003635656,0.000020259336,0.000049359947,0.0006099855,2.730522e-7,0.45533434,0.00001655509,0.00007618502,0.0026230006],"study_design_scores_gemma":[0.0012586764,0.00096326915,0.8147695,0.00006049426,0.000024939758,0.000116658885,0.00017113338,0.000042656437,0.11394709,0.00004350547,0.06841365,0.00018843319],"about_ca_topic_score_codex":0.008846084,"about_ca_topic_score_gemma":0.000994113,"teacher_disagreement_score":0.34138724,"about_ca_system_score_codex":0.00014117287,"about_ca_system_score_gemma":0.00019957015,"threshold_uncertainty_score":0.9977541},"labels":[],"label_agreement":null},{"id":"W4285393955","doi":"10.3390/v14071531","title":"Epidemiology and Ecology of Influenza A Viruses among Wildlife in the Arctic","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Wildlife; Epidemiology; Ecology; Arctic; Biology; Virology; Geography; Medicine","score_opus":0.39369475765917966,"score_gpt":0.4968462440679489,"score_spread":0.10315148640876926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285393955","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0043812655,0.9930092,3.3773273e-7,0.00008796405,0.00011350764,0.0018056291,0.00009203244,0.000029997385,0.0004800309],"genre_scores_gemma":[0.0001281922,0.9851331,0.00006787108,0.013413756,0.00013599188,0.0010268887,0.0000115433095,0.000056589804,0.00002603451],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9942266,0.0026207138,0.0014918287,0.00058185664,0.00038516565,0.0006938834],"domain_scores_gemma":[0.9867503,0.011638426,0.0006670138,0.00077139196,0.000059317084,0.00011355019],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0032481095,0.0004894939,0.0035740093,0.00076542055,0.00016741574,0.000007247091,0.00048078242,0.00034199422,0.00035582],"category_scores_gemma":[0.01389866,0.00029770297,0.00037318096,0.000753391,0.0012665385,0.000090767004,0.0006165346,0.001455226,0.000039460218],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000370508,0.000633545,0.59572655,0.059731767,0.0020206124,0.00043813395,0.0015458931,0.000006164774,0.0000020268026,0.002304791,0.005354714,0.3318653],"study_design_scores_gemma":[0.0005403836,0.00045434164,0.022477396,0.0027466782,0.0006759088,0.00010172093,0.00019771625,0.0000011367573,4.792082e-7,0.00014447336,0.97244537,0.00021437899],"about_ca_topic_score_codex":0.0014381122,"about_ca_topic_score_gemma":0.00034215342,"teacher_disagreement_score":0.96709067,"about_ca_system_score_codex":0.00021638347,"about_ca_system_score_gemma":0.0004420112,"threshold_uncertainty_score":0.9999475},"labels":[],"label_agreement":null},{"id":"W4285596342","doi":"10.3390/v14071534","title":"Hepatitis B and C in Immigrants and Refugees in Central Brazil: Prevalence, Associated Factors, and Immunization","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Ministério da Ciência, Tecnologia, Inovações e Comunicações; Fundação de Amparo à Pesquisa do Estado de Goiás; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Refugee; Immigration; Immunization; Virology; Medicine; Environmental health; Hepatitis B; Immunology; Geography; Antibody","score_opus":0.017392202658926357,"score_gpt":0.281222464067463,"score_spread":0.2638302614085366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285596342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939215,0.0054362165,5.206091e-7,0.00010068874,0.00005611359,0.00026888348,0.00013634586,0.000029511702,0.000050184924],"genre_scores_gemma":[0.9919989,0.0074832337,0.00002196826,0.00034003824,0.000009251341,0.000022828464,0.000025239195,0.0000147267265,0.00008381669],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990779,0.00012745704,0.00021392948,0.00020463791,0.00016255616,0.0002134829],"domain_scores_gemma":[0.9996816,0.00011146602,0.00005656661,0.00008288314,0.000017362036,0.000050110168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001558814,0.000116362666,0.00025718895,0.00017711848,0.0001231057,0.000017025097,0.0000315484,0.000040573257,0.00004875742],"category_scores_gemma":[0.00030839094,0.000110483124,0.000010626956,0.00025487778,0.00008119018,0.00013411063,0.0001452081,0.000165849,4.9021753e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004670575,0.00007705653,0.99558187,0.000055581328,0.000021580898,0.000024779634,0.0017891218,0.000001426903,0.0015854748,0.000019472482,0.00019887964,0.0005980538],"study_design_scores_gemma":[0.00097494025,0.00013919982,0.9970759,0.00011553048,0.000021710315,0.0000059617405,0.0001248467,0.00007573403,0.00043282777,0.00004142221,0.0008880794,0.0001038475],"about_ca_topic_score_codex":0.021673795,"about_ca_topic_score_gemma":0.04512421,"teacher_disagreement_score":0.023450417,"about_ca_system_score_codex":0.000093654366,"about_ca_system_score_gemma":0.000026738322,"threshold_uncertainty_score":0.984841},"labels":[],"label_agreement":null},{"id":"W4287219792","doi":"10.3390/v14081605","title":"A Hierarchical Framework for Assessing Transmission Causality of Respiratory Viruses","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; University of Calgary; University of Alberta","funders":"National Institute for Health and Care Research","keywords":"Transmission (telecommunications); Causality (physics); Consistency (knowledge bases); Hierarchy; Pandemic; Airborne transmission; Biology; Medicine; Computer science; Coronavirus disease 2019 (COVID-19); Disease; Artificial intelligence; Pathology; Political science","score_opus":0.3756542906499945,"score_gpt":0.5279089398834473,"score_spread":0.15225464923345283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4287219792","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002112404,0.9908388,0.0051640724,0.000014445067,0.00027730718,0.0024876304,0.00023767987,0.00014752126,0.000621267],"genre_scores_gemma":[0.000013258489,0.99229914,0.0046147653,0.0011171345,0.0005261524,0.0011308562,0.000039716873,0.00020048325,0.000058518788],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952698,0.001072375,0.0014432125,0.00076864497,0.0009122782,0.0005337108],"domain_scores_gemma":[0.99475074,0.0032358721,0.00053114706,0.00102474,0.00014305432,0.00031446182],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001544124,0.0005300698,0.0025244858,0.00089758827,0.00036516978,0.00007703998,0.00039138575,0.0006790929,0.001669218],"category_scores_gemma":[0.0024906679,0.00042046187,0.0010847822,0.0011744798,0.0003472999,0.00021245176,0.00018004338,0.0019174787,0.000029359362],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014242787,0.00043339652,0.00012862819,0.032327343,0.00031747302,0.000038754577,0.00003147216,8.028483e-7,0.00019656037,0.0016314527,0.00083971815,0.96391195],"study_design_scores_gemma":[0.0003870353,0.0008057194,0.000026618713,0.010058601,0.0008880382,0.000025923635,0.000017728808,0.000002578834,0.00032798946,0.0004958625,0.9866262,0.0003377194],"about_ca_topic_score_codex":0.00004751662,"about_ca_topic_score_gemma":0.000001990467,"teacher_disagreement_score":0.98578644,"about_ca_system_score_codex":0.00044497318,"about_ca_system_score_gemma":0.0023522791,"threshold_uncertainty_score":0.9998247},"labels":[],"label_agreement":null},{"id":"W4287219807","doi":"10.3390/v14081595","title":"A Novel Iridovirus Discovered in Deep-Sea Carnivorous Sponges","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Synthetic Organic Chemistry Methods","field":"Chemistry","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"National Marine Fisheries Service; Natural Sciences and Engineering Research Council of Canada; National Oceanic and Atmospheric Administration; ArcticNet; Canada First Research Excellence Fund; Office of Marine and Aviation Operations; Ocean Frontier Institute","keywords":"Biology; Sponge; ORFS; Phylogenetic tree; Zoology; Calanoida; Iridovirus; Harpacticoida; Bay; Crustacean; Copepod; Virus; Botany; Genetics; Gene","score_opus":0.03438584469219232,"score_gpt":0.28797634997934535,"score_spread":0.25359050528715305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4287219807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98666245,0.00079932,0.00017746665,0.00015220337,0.00021803576,0.00007114444,0.000495877,0.00012112665,0.011302351],"genre_scores_gemma":[0.99634355,0.000025942321,0.0018094246,0.0002937332,0.00018011224,0.00010597136,0.00003178293,0.000072200455,0.0011372756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998274,0.00006143486,0.00033663813,0.00049123465,0.000422016,0.00041465863],"domain_scores_gemma":[0.9987402,0.0003831933,0.00012253644,0.00064572773,0.000014774895,0.000093575676],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032423474,0.00024047302,0.00030026518,0.00007003204,0.00014497951,0.00003729548,0.00053579675,0.0000864665,0.009730194],"category_scores_gemma":[0.00042733215,0.0002661774,0.00009097115,0.0003062005,0.000082350765,0.0000884374,0.00046628134,0.00043897444,0.00003754957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011484952,0.00030121987,0.0065619485,0.000056574732,0.000030782176,0.00010799658,0.00044001217,0.00016000791,0.98706174,0.00004936526,0.0001767054,0.004938818],"study_design_scores_gemma":[0.0012034762,0.000023051802,0.0006082983,0.000023391638,0.000032411648,0.00025401093,0.0016132541,0.00025479094,0.9308332,0.00016992407,0.06452818,0.0004559651],"about_ca_topic_score_codex":0.0009122016,"about_ca_topic_score_gemma":0.00013210303,"teacher_disagreement_score":0.06435148,"about_ca_system_score_codex":0.00037672606,"about_ca_system_score_gemma":0.00012873285,"threshold_uncertainty_score":0.999979},"labels":[],"label_agreement":null},{"id":"W4288205420","doi":"10.3390/v14071414","title":"Weekly Nowcasting of New COVID-19 Cases Using Past Viral Load Measurements","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Group for Research in Decision Analysis","funders":"","keywords":"Generalizability theory; Mean squared error; Support vector machine; Computer science; Regression; Ordinary least squares; Machine learning; Predictive modelling; Statistics; Coronavirus disease 2019 (COVID-19); Artificial intelligence; Data mining; Medicine; Mathematics; Disease; Internal medicine","score_opus":0.7221160741256842,"score_gpt":0.49312664988518734,"score_spread":0.2289894242404969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288205420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880606,0.0012981262,0.007207262,0.00169769,0.00033974124,0.00049636845,0.00012211833,0.0002606723,0.0005174267],"genre_scores_gemma":[0.9841822,0.000009345527,0.008818449,0.006567373,0.00021398465,0.000028684904,0.0000017533476,0.000032652453,0.00014557996],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99767554,0.0003450719,0.00060033397,0.00035121525,0.00067071576,0.00035710746],"domain_scores_gemma":[0.99478316,0.0042444803,0.00041466608,0.00031449052,0.00007561672,0.00016759463],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0012326712,0.00021374598,0.0005148789,0.000080504076,0.0005158254,0.000015170269,0.00029826374,0.0000433881,0.00054955354],"category_scores_gemma":[0.025488514,0.00018742988,0.00013956694,0.00029605877,0.000099477176,0.00008679403,0.0006941658,0.00018747439,0.00001404207],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007285522,0.0011448843,0.6636403,0.0010785954,0.00074116106,0.00029916948,0.0052729375,0.008671503,0.061580345,0.0043216334,0.24844593,0.004074953],"study_design_scores_gemma":[0.00920285,0.002898583,0.012643755,0.0005011175,0.0015480975,0.00039725917,0.014605142,0.0039349315,0.017004052,0.1943778,0.7391499,0.0037364939],"about_ca_topic_score_codex":0.0043899394,"about_ca_topic_score_gemma":0.00022389927,"teacher_disagreement_score":0.65099657,"about_ca_system_score_codex":0.00074304745,"about_ca_system_score_gemma":0.00037764397,"threshold_uncertainty_score":0.9827202},"labels":[],"label_agreement":null},{"id":"W4288489840","doi":"10.3390/v14081667","title":"Novel Coronavirus and Common Pneumonia Detection from CT Scans Using Deep Learning-Based Extracted Features","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 diagnosis using AI","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Chicoutimi","funders":"Prince Mohammad Bin Fahd University; Qassim University","keywords":"Coronavirus disease 2019 (COVID-19); Artificial intelligence; Machine learning; Pandemic; Pneumonia; Computer science; Support vector machine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Classifier (UML); Deep learning; Process (computing); Feature extraction; Medicine; Pattern recognition (psychology); Infectious disease (medical specialty); Disease; Pathology; Internal medicine","score_opus":0.057915158499095225,"score_gpt":0.33614278189809765,"score_spread":0.2782276233990024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288489840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963666,0.0010831224,0.0007898957,0.0008475478,0.00028437443,0.000273106,0.00008806492,0.00025554333,0.000011744447],"genre_scores_gemma":[0.9878426,0.000023131312,0.0004412989,0.011403124,0.00011721957,0.000038541533,0.00005166631,0.000058745238,0.00002364609],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986286,0.00013774897,0.0002200424,0.00039679173,0.00037209733,0.00024468408],"domain_scores_gemma":[0.99885035,0.0005696292,0.00014917724,0.00026744878,0.00004395377,0.000119464275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016492618,0.00020098091,0.000301558,0.0002056103,0.0005428176,0.000058265672,0.000091017,0.000053027197,0.0002239553],"category_scores_gemma":[0.0002315873,0.00021465728,0.00006186553,0.0003405895,0.00008526914,0.00009712165,0.00010467821,0.000598724,0.000005998945],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041594094,0.00035692455,0.070541024,0.000034527926,0.00006502237,0.00010986108,0.00021467796,0.0194131,0.887013,0.0000022335319,0.00009796174,0.021735692],"study_design_scores_gemma":[0.003663377,0.000705913,0.6943119,0.00016828025,0.000492755,0.00023397758,0.00033855022,0.055240333,0.13784541,0.000020477766,0.10648167,0.0004973293],"about_ca_topic_score_codex":0.022072855,"about_ca_topic_score_gemma":0.0025492832,"teacher_disagreement_score":0.7491676,"about_ca_system_score_codex":0.0003605714,"about_ca_system_score_gemma":0.00013137705,"threshold_uncertainty_score":0.98443925},"labels":[],"label_agreement":null},{"id":"W4288490315","doi":"10.3390/v14081657","title":"Detection of Nipah and Hendra Viruses Using Recombinant Human Ephrin B2 Capture Virus in Immunoassays","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Hendra Virus; Virology; Monoclonal antibody; Recombinant DNA; Biology; Virus; Antibody; Immunology; Ebola virus; Gene","score_opus":0.048286622134159844,"score_gpt":0.3172937279734735,"score_spread":0.26900710583931364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288490315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99538296,0.0038553826,0.000011256069,0.000035984216,0.00023951454,0.00023131994,0.000054541597,0.000042257103,0.00014676039],"genre_scores_gemma":[0.9988321,0.000100226665,0.000037702594,0.00087977847,0.00003255053,0.000031990356,0.000008874538,0.000022819362,0.000053964293],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988884,0.00017235802,0.00031216122,0.00024529782,0.0001687684,0.00021304928],"domain_scores_gemma":[0.999528,0.000044557844,0.00012444606,0.00022127644,0.000022776374,0.000058978294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019541499,0.0001504267,0.00032743858,0.0002647661,0.000248479,0.0000059806043,0.00007774149,0.0000811651,0.00026709816],"category_scores_gemma":[0.00006508686,0.00014405271,0.00006713349,0.00024459136,0.00014187771,0.00013066313,0.00013992481,0.00030673694,0.0000041087123],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077433465,0.00038089664,0.08582577,0.000073792165,0.000054764292,0.00008076134,0.00039310232,0.000034902732,0.9110889,0.0002865179,0.00007725075,0.00092903175],"study_design_scores_gemma":[0.0052755116,0.0021329075,0.6301221,0.00018175831,0.00039350273,0.00030131312,0.0023788759,0.00030603295,0.34696183,0.0018523464,0.009561442,0.0005323683],"about_ca_topic_score_codex":0.0033010026,"about_ca_topic_score_gemma":0.00045883268,"teacher_disagreement_score":0.5641271,"about_ca_system_score_codex":0.00007658863,"about_ca_system_score_gemma":0.00005335768,"threshold_uncertainty_score":0.58742994},"labels":[],"label_agreement":null},{"id":"W4288490694","doi":"10.3390/v14081659","title":"Finding Asymptomatic Spreaders in a COVID-19 Transmission Network by Graph Attention Networks","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Advanced Graph Neural Networks","field":"Computer Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Computer science; Graph; Context (archaeology); Transmission (telecommunications); Coronavirus disease 2019 (COVID-19); Representation (politics); Artificial intelligence; Theoretical computer science; Medicine; Biology; Infectious disease (medical specialty); Disease; Telecommunications","score_opus":0.02794700601417969,"score_gpt":0.28469434709006713,"score_spread":0.2567473410758874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288490694","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.041750047,0.002458574,0.9534953,0.0008331868,0.00059567316,0.00040034857,0.000004014133,0.0004015999,0.00006120351],"genre_scores_gemma":[0.98211384,0.0002832228,0.0089160325,0.008276833,0.00009403335,0.00019474559,0.000024770508,0.00003584817,0.000060693434],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9976452,0.0003714893,0.00038801992,0.00057269115,0.00040382435,0.00061878376],"domain_scores_gemma":[0.99881595,0.00035889345,0.00016968859,0.00042516034,0.000009774539,0.00022054187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004707622,0.00022176097,0.00023779529,0.00022376684,0.00057933846,0.000111357374,0.00089545426,0.000069011185,0.000062983934],"category_scores_gemma":[0.000023703524,0.00023162931,0.00011296789,0.0018419877,0.000056663306,0.0007361027,0.00028386075,0.00045664964,0.0000050605545],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037799335,0.00008388911,0.00753697,0.00001851397,0.000016074388,0.00005350064,0.00027216945,0.95038164,0.00060924597,0.0033596053,0.014132964,0.023497615],"study_design_scores_gemma":[0.001931727,0.00031729462,0.0033045707,0.00014830264,0.000018960727,0.00007015801,0.00016199374,0.92504126,0.00008578765,0.0362435,0.031745546,0.0009309274],"about_ca_topic_score_codex":0.00005663061,"about_ca_topic_score_gemma":0.000016142696,"teacher_disagreement_score":0.9445793,"about_ca_system_score_codex":0.00015931939,"about_ca_system_score_gemma":0.000047896814,"threshold_uncertainty_score":0.94455695},"labels":[],"label_agreement":null},{"id":"W4292182380","doi":"10.3390/v14081764","title":"Human Papillomavirus 16 E6 and E7 Oncoproteins Alter the Abundance of Proteins Associated with DNA Damage Response, Immune Signaling and Epidermal Differentiation","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba; Manitoba Health","funders":"","keywords":"Biology; DNA damage; Proteome; Interferon; Keratinocyte; Signal transduction; Cancer research; Cell biology; Immunology; DNA; Cell culture; Genetics","score_opus":0.03756080554507472,"score_gpt":0.3154235120573886,"score_spread":0.2778627065123139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292182380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972502,0.001026877,0.000035364756,0.0005696649,0.000014670233,0.00072612317,0.000069645575,0.000027676751,0.0002797914],"genre_scores_gemma":[0.99905246,0.00002410683,0.000017976798,0.0003443825,0.000041780204,0.0001404278,0.000019417963,0.00002288237,0.00033653746],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998568,0.00029931468,0.00023993333,0.00021568724,0.00046521315,0.00021184179],"domain_scores_gemma":[0.99925673,0.00023019618,0.00012952449,0.00022629881,0.00008749801,0.00006976738],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006433062,0.000119242686,0.00026941017,0.00008698069,0.000455443,0.000042375646,0.00009531768,0.000035249202,0.0009254133],"category_scores_gemma":[0.00017120947,0.00007861938,0.000035274206,0.00022508035,0.0002150287,0.00009518309,0.00017164701,0.00032036024,0.0000010526618],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055333264,0.00037087072,0.050982565,0.0001780464,0.00022532567,0.000034711724,0.0013911524,0.000013053193,0.9333497,0.00027053707,0.000098833436,0.0075518563],"study_design_scores_gemma":[0.0024384763,0.0015449265,0.8825585,0.00007320892,0.00006758233,0.000008822971,0.00035861504,0.00006948249,0.11176687,0.00021991601,0.0007720068,0.00012157389],"about_ca_topic_score_codex":0.00050186604,"about_ca_topic_score_gemma":0.000170843,"teacher_disagreement_score":0.83157593,"about_ca_system_score_codex":0.00010328111,"about_ca_system_score_gemma":0.00008405692,"threshold_uncertainty_score":0.9999879},"labels":[],"label_agreement":null},{"id":"W4292266683","doi":"10.3390/v14081788","title":"Salmonella Enteritidis Bacteriophages Isolated from Kenyan Poultry Farms Demonstrate Time-Dependent Stability in Environments Mimicking the Chicken Gastrointestinal Tract","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Jomo Kenyatta University of Agriculture and Technology; Consortium of International Agricultural Research Centers; Government of the United Kingdom; Department of Health and Social Care; International Development Research Centre; Université Laval","keywords":"Salmonella; Infectivity; Salmonella enteritidis; Microbiology; Incubation; Biology; Gastrointestinal tract; Salmonella enterica; Veterinary medicine; Antibiotics; Food science; Serotype; Bacteria; Virology; Virus; Medicine","score_opus":0.015390919071300793,"score_gpt":0.22255837051916197,"score_spread":0.20716745144786117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292266683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979916,0.000051473042,0.000092841285,0.00022287644,0.00017926714,0.0003377476,0.0005475905,0.000050268365,0.00052629714],"genre_scores_gemma":[0.9987741,0.000028598433,0.00021176608,0.0005331257,0.00003899291,0.000057594265,0.00006810443,0.000034497574,0.00025321404],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979227,0.00035612253,0.00044628646,0.0005591049,0.00027091205,0.00044488037],"domain_scores_gemma":[0.9991641,0.00014123933,0.00018393686,0.0004112953,0.000002485952,0.00009691854],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029126956,0.0002708167,0.00022655194,0.000043017055,0.00045562914,0.00011201821,0.0005142936,0.00003970578,0.027191974],"category_scores_gemma":[0.000023060447,0.00023239494,0.00010808656,0.00017086949,0.00020532843,0.00038425002,0.00059571204,0.00057408883,0.0006245245],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009920894,0.00040958176,0.16835342,0.0000015845606,0.000010041861,0.00005101095,0.00040358413,0.00027184052,0.8287268,2.1188029e-7,0.00009116507,0.0015815047],"study_design_scores_gemma":[0.00058668235,0.00021164601,0.95526576,0.00003447032,0.00003338455,0.00026254627,0.0016041733,0.00043149453,0.035861503,0.000033797623,0.0053038565,0.0003707017],"about_ca_topic_score_codex":0.004994998,"about_ca_topic_score_gemma":0.00027853006,"teacher_disagreement_score":0.79286534,"about_ca_system_score_codex":0.00042267388,"about_ca_system_score_gemma":0.000015641457,"threshold_uncertainty_score":0.9736973},"labels":[],"label_agreement":null},{"id":"W4292409177","doi":"10.3390/v14081800","title":"HepG2-NTCP Subclones Exhibiting High Susceptibility to Hepatitis B Virus Infection","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"","keywords":"Hepatitis B virus; Infectivity; Virology; Permissiveness; clone (Java method); Biology; Viral entry; Virus; In vitro; Viral replication; Cell culture; Antigen; Intracellular; Hepatitis B; Immunology; Gene; Genetics","score_opus":0.03638918190113704,"score_gpt":0.3017451281796109,"score_spread":0.26535594627847386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292409177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99549323,0.00026055702,0.00013670627,0.0008021934,0.000809976,0.0006967373,0.00019957135,0.00042979018,0.0011712334],"genre_scores_gemma":[0.99233073,0.0005013465,0.00059719535,0.005333274,0.00038674782,0.00034675747,0.000033268378,0.00005741393,0.00041329057],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99768484,0.00021030578,0.00046980244,0.0005531661,0.0006096274,0.00047226145],"domain_scores_gemma":[0.9988569,0.00018136724,0.000118429365,0.00048920145,0.00014858451,0.00020549611],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004790429,0.00025758386,0.00047678166,0.0002663281,0.00074365037,0.000035525252,0.0001084734,0.00005614161,0.0026264042],"category_scores_gemma":[0.0007028168,0.0002671534,0.00013142472,0.00066502613,0.00008338068,0.00016937913,0.00044097888,0.00034535961,0.00046572872],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016293534,0.00027395293,0.926744,0.0000646054,0.00007401133,0.000089924055,0.00062569,0.00006463111,0.056974337,0.0002602302,0.009077963,0.0055877254],"study_design_scores_gemma":[0.0007069286,0.001079861,0.86983883,0.0000606855,0.00008963031,0.000050096507,0.00008069115,0.000028759823,0.041916978,0.00020526533,0.085584,0.00035827584],"about_ca_topic_score_codex":0.19903222,"about_ca_topic_score_gemma":0.0695237,"teacher_disagreement_score":0.12950853,"about_ca_system_score_codex":0.00049388665,"about_ca_system_score_gemma":0.000109266985,"threshold_uncertainty_score":0.99997807},"labels":[],"label_agreement":null},{"id":"W4292573041","doi":"10.3390/v14081825","title":"Rotavirus C Replication in Porcine Intestinal Enteroids Reveals Roles for Cellular Cholesterol and Sialic Acids","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"International Development Research Centre; Wellcome Trust","keywords":"Rotavirus; Biology; Virology; Virus; Viral replication; Sialic acid; Pathogenesis; Viremia; Cell culture; Titer; Permissiveness; Receptor; Microbiology; Immunology; Genetics","score_opus":0.0556482511524105,"score_gpt":0.35072420063091136,"score_spread":0.29507594947850085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292573041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99591565,0.0007052167,0.00052109495,0.0020013647,0.000046679233,0.0006596154,0.000058873902,0.00003666885,0.000054845324],"genre_scores_gemma":[0.9950568,0.0001238736,0.0007685801,0.0030803892,0.000115925344,0.00052799424,0.000090926624,0.000020431822,0.00021508966],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986232,0.00017805764,0.0003461094,0.00037658072,0.00014681708,0.0003292351],"domain_scores_gemma":[0.9993924,0.0000481178,0.00007873108,0.00032050814,0.000035962956,0.00012429092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007302419,0.00011500526,0.00030655204,0.00017336832,0.00009187508,0.000013407889,0.00010577433,0.00003405576,0.000080147256],"category_scores_gemma":[0.00064734905,0.00010922337,0.000049041333,0.00012137611,0.000073985626,0.00007918214,0.00014798378,0.00022664705,0.0000053849826],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010306437,0.0001344086,0.48696187,0.00006377316,0.000017203847,0.000030413365,0.00006460967,0.000008347055,0.5016077,0.0000906689,0.0016637541,0.008326577],"study_design_scores_gemma":[0.011376616,0.011362059,0.83884233,0.00037145568,0.00009784327,0.0009281568,0.000626694,0.0017487184,0.040104713,0.0019317903,0.09220352,0.00040606846],"about_ca_topic_score_codex":0.00015841505,"about_ca_topic_score_gemma":0.00004074604,"teacher_disagreement_score":0.461503,"about_ca_system_score_codex":0.00008338749,"about_ca_system_score_gemma":0.000025912273,"threshold_uncertainty_score":0.44539997},"labels":[],"label_agreement":null},{"id":"W4292573286","doi":"10.3390/v14081831","title":"Transcriptomic Analyses of Grapevine Leafroll-Associated Virus 3 Infection in Leaves and Berries of ‘Cabernet Franc’","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Transcriptome; Gene; Sugar; RNA-Seq; Berry; Gene expression; Wine; Photosynthesis; Virus; Wine grape; Botany; Horticulture; Virology; Genetics; Cultivar; Biochemistry; Food science","score_opus":0.08232737730906936,"score_gpt":0.31051391107483683,"score_spread":0.22818653376576747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292573286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963779,0.002196597,2.2998151e-7,0.00007724536,0.000035530844,0.00012433674,0.0010757935,0.000021117077,0.00009123534],"genre_scores_gemma":[0.9972219,0.0025716266,0.000003486282,0.000057632045,0.000012971175,0.000022685079,0.000029985607,8.6955293e-7,0.00007884861],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99892265,0.00019888223,0.00026597208,0.00016950167,0.00026432835,0.00017865766],"domain_scores_gemma":[0.9994908,0.00029387316,0.00012029182,0.000032324657,0.000034297533,0.000028413178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027480457,0.000101590806,0.00030459499,0.000068055306,0.00013668208,0.000009904537,0.000113464,0.0000340762,0.00022703],"category_scores_gemma":[0.00013322622,0.000046495697,0.000063350664,0.0006246988,0.00015511311,0.00011360148,0.000099566605,0.0001252889,0.0000012373526],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009141126,0.0001368978,0.15969513,0.000011587516,0.00004993332,0.0000012617771,0.00016605781,0.00004039021,0.83809257,0.000019116822,0.00026702482,0.0014286439],"study_design_scores_gemma":[0.00019863939,0.0003505626,0.8033172,0.000014213483,0.000016046777,8.7800424e-7,0.00017369905,0.000029272293,0.19453786,0.00018255062,0.0010986985,0.00008040474],"about_ca_topic_score_codex":0.019124573,"about_ca_topic_score_gemma":0.013105227,"teacher_disagreement_score":0.64362204,"about_ca_system_score_codex":0.000021738582,"about_ca_system_score_gemma":0.000008105978,"threshold_uncertainty_score":0.98740715},"labels":[],"label_agreement":null},{"id":"W4293224824","doi":"10.3390/v14091864","title":"Impact of Host Telomere Length on HHV-6 Integration","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"European Research Council; HHV-6 Foundation","keywords":"Telomere; Biology; Genome; Virus; Virology; Genetics; DNA; Gene","score_opus":0.06398985949011757,"score_gpt":0.3844465590322865,"score_spread":0.32045669954216893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293224824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98987985,0.00024014873,0.0000056780864,0.00016729289,0.00006618293,0.00026323093,0.0001524828,0.00003843401,0.009186696],"genre_scores_gemma":[0.9986767,0.00008168735,0.000037635993,0.00038542965,0.00009064516,0.000035383477,0.000020252302,0.000022908971,0.0006493412],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99888676,0.00006280853,0.00019526189,0.00017788252,0.0004765778,0.00020068578],"domain_scores_gemma":[0.99940306,0.000090410445,0.00006106952,0.00028519265,0.00006700714,0.000093250674],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020600721,0.00010937488,0.00023112929,0.00028226004,0.00012843557,0.000012987861,0.000103240855,0.000033866643,0.0051720953],"category_scores_gemma":[0.00010400867,0.00008175052,0.00015268142,0.00038238819,0.000053044114,0.000065554304,0.00007936463,0.00034425457,0.00012782215],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005120635,0.002173642,0.14094575,0.00008453294,0.00040692446,0.00010527431,0.0013164829,0.0001263998,0.68660873,0.0037703605,0.039059956,0.120281294],"study_design_scores_gemma":[0.0037503429,0.011784357,0.6356812,0.00012133202,0.00008987738,0.000071092545,0.0010182646,0.00047135958,0.16543439,0.0001887727,0.18097915,0.0004098398],"about_ca_topic_score_codex":0.0013997039,"about_ca_topic_score_gemma":0.000033816876,"teacher_disagreement_score":0.5211744,"about_ca_system_score_codex":0.00022332172,"about_ca_system_score_gemma":0.00021694493,"threshold_uncertainty_score":0.9957373},"labels":[],"label_agreement":null},{"id":"W4293724104","doi":"10.3390/v14091917","title":"Deletion of the CD2v Gene from the Genome of ASFV-Kenya-IX-1033 Partially Reduces Virulence and Induces Protection in Pigs","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Deutsche Gesellschaft für Internationale Zusammenarbeit; International Development Research Centre","keywords":"African swine fever virus; Virology; Biology; Genotype; Virulence; Virus; Immunity; Gene; Immunology; Genetics; Immune system","score_opus":0.06130224777118135,"score_gpt":0.2391552969790613,"score_spread":0.17785304920787995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293724104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975997,0.0007175102,0.0000015837152,0.0012241977,0.00005268095,0.00026825257,0.000074391246,0.000009032333,0.0000526057],"genre_scores_gemma":[0.9992769,0.00014549754,0.000008023604,0.00043021576,0.00006411457,0.00005526775,0.000008657758,5.5945145e-7,0.000010794868],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999101,0.00031307014,0.00019802524,0.0001596913,0.00012473091,0.000103510305],"domain_scores_gemma":[0.9996329,0.0001331429,0.00015654913,0.000047998317,0.00001428245,0.000015133528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033665824,0.00006424275,0.00011430351,0.000008335105,0.00017812723,0.000008783365,0.0002360542,0.000026909815,0.0001960161],"category_scores_gemma":[0.000086033884,0.000021009158,0.000039374703,0.00022525707,0.000111091875,0.00006411615,0.00022287894,0.000084770676,0.0000015692509],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009530058,0.00005506863,0.05368481,0.0000036931594,0.00001209194,3.5602557e-7,0.00016357731,0.000085098036,0.9392429,0.00031149446,0.000056533125,0.006289085],"study_design_scores_gemma":[0.00006567905,0.00015174973,0.98519385,0.000008410293,0.000013013569,3.06476e-7,0.00056950044,0.000051048537,0.009366729,0.0014310974,0.0030946662,0.000053964264],"about_ca_topic_score_codex":0.003256298,"about_ca_topic_score_gemma":0.000734242,"teacher_disagreement_score":0.931509,"about_ca_system_score_codex":0.000010033687,"about_ca_system_score_gemma":0.000005946361,"threshold_uncertainty_score":0.492257},"labels":[],"label_agreement":null},{"id":"W4293724778","doi":"10.3390/v14091927","title":"Comparing Current and Next-Generation Humanized Mouse Models for Advancing HIV and HIV/Mtb Co-Infection Studies","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; McMaster University","funders":"Faculdade de Ciências da Saúde, Universidade de Macau; Canadian Institutes of Health Research; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; McMaster University","keywords":"Humanized mouse; Immune system; Immunology; Tuberculosis; Mycobacterium tuberculosis; Disease; Human immunodeficiency virus (HIV); Biology; Virology; Genetically modified mouse; Medicine; Transgene; Pathology","score_opus":0.33459835199878335,"score_gpt":0.43746313981654505,"score_spread":0.1028647878177617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293724778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881951,0.007986624,0.002556059,0.000583177,0.00011360642,0.00045000904,0.000023840605,0.00005516802,0.00003639409],"genre_scores_gemma":[0.99371934,0.0043818955,0.0005841231,0.000673439,0.00022503527,0.00025068823,0.00007698027,0.000016290058,0.00007221958],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.999123,0.00011170301,0.000196948,0.00023249676,0.000115809744,0.00022006758],"domain_scores_gemma":[0.9995022,0.00021129577,0.00005227387,0.000094596784,0.000057010708,0.00008263103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044880758,0.00009801585,0.0003052855,0.00011756392,0.00041431384,0.000018891931,0.000022957674,0.000019765477,0.000013431328],"category_scores_gemma":[0.00032180618,0.00008641423,0.00003135464,0.000052686926,0.000055233515,0.00018719955,0.00008962538,0.00014813653,0.0000019269216],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019696897,0.0005837605,0.32165736,0.0012917449,0.000735475,0.000010909054,0.004943945,0.016010515,0.5159864,0.0054277116,0.10015393,0.031228594],"study_design_scores_gemma":[0.008393299,0.001527705,0.009074133,0.00012249875,0.0003035773,0.00008561738,0.0019301745,0.845838,0.019754192,0.0017335579,0.11071217,0.00052507885],"about_ca_topic_score_codex":0.000067152934,"about_ca_topic_score_gemma":0.000072243856,"teacher_disagreement_score":0.8298275,"about_ca_system_score_codex":0.00009675551,"about_ca_system_score_gemma":0.000022792594,"threshold_uncertainty_score":0.35238698},"labels":[],"label_agreement":null},{"id":"W4293726411","doi":"10.3390/v14091870","title":"A Glance at the Development and Patent Literature of Tecovirimat: The First-in-Class Therapy for Emerging Monkeypox Outbreak","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Monkeypox; Outbreak; Virology; Class (philosophy); Medicine; Biology; Computer science; Artificial intelligence; Genetics; Vaccinia","score_opus":0.09261953841633458,"score_gpt":0.3320005587822266,"score_spread":0.23938102036589204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293726411","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009506834,0.99641687,0.0000028761983,0.00016931367,0.00027177203,0.0014860854,0.0005197844,0.00001924967,0.00016338607],"genre_scores_gemma":[0.00013750265,0.9969108,0.000018911316,0.0003911455,0.00003168857,0.0013250897,0.00019123804,0.000038209033,0.0009553924],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981277,0.0003313197,0.0005645697,0.00040003101,0.00008581431,0.0004905724],"domain_scores_gemma":[0.9980385,0.0011431616,0.0002965687,0.0004666613,0.000035464167,0.000019694638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066879665,0.00036093843,0.0008677578,0.00015797272,0.00057411543,0.00003557672,0.00064829754,0.00024554934,0.0002791228],"category_scores_gemma":[0.00011030307,0.00017301712,0.00024590932,0.00029005815,0.00024094027,0.000049643353,0.00046450214,0.00061535387,0.000041381583],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018621031,0.00007423493,0.0001033313,0.0020144354,0.00044683256,0.000005482239,0.0014883071,6.1945235e-7,0.00009202064,0.0001442696,0.004251127,0.9911931],"study_design_scores_gemma":[0.0005802969,0.00008172983,0.000055787837,0.0012164456,0.000048179874,0.000034701927,0.00007018343,3.7363387e-7,0.00053983316,0.00002819556,0.9971466,0.00019767931],"about_ca_topic_score_codex":0.00008492901,"about_ca_topic_score_gemma":0.00036623885,"teacher_disagreement_score":0.9928955,"about_ca_system_score_codex":0.00013478138,"about_ca_system_score_gemma":0.00026336111,"threshold_uncertainty_score":0.70554334},"labels":[],"label_agreement":null},{"id":"W4294233585","doi":"10.3390/v14091941","title":"Linking Human Betaretrovirus with Autoimmunity and Liver Disease in Patients with Primary Biliary Cholangitis","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Autoimmunity; Primary biliary cirrhosis; Immunology; Autoimmune disease; Disease; Antibody; Etiology; Autoantibody; Autoimmune hepatitis; Liver disease; Hepatitis C virus; Medicine; Virus; Hepatitis; Pathology; Internal medicine","score_opus":0.04519997387768021,"score_gpt":0.2883795275794244,"score_spread":0.2431795537017442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294233585","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1675477,0.83046454,3.226906e-7,0.0000024006777,0.000039332823,0.001190331,0.00047978357,0.000071348935,0.00020422222],"genre_scores_gemma":[0.0062331306,0.9906552,0.000046871304,0.00036313655,0.000058770656,0.00014487251,0.0023186964,0.00010872311,0.00007060855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980566,0.00030571868,0.00038565966,0.0004595477,0.00047696775,0.0003155267],"domain_scores_gemma":[0.99854785,0.00014655739,0.00025050988,0.00075407285,0.00004534267,0.00025564953],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001523296,0.00047385372,0.0012750342,0.00035844816,0.00029624562,0.000055869732,0.00022365816,0.00010566591,0.00043573076],"category_scores_gemma":[0.00003521968,0.00032290805,0.00015935327,0.0004141977,0.00019407875,0.0002653848,0.00035747388,0.0009521183,0.000010693355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003827705,0.0009045381,0.6586758,0.017756784,0.00031785213,0.00031446957,0.00009174263,2.5381811e-7,1.2286768e-7,0.0000076025162,0.000042468317,0.32150558],"study_design_scores_gemma":[0.0011968383,0.0006264342,0.6281009,0.009384574,0.0017509578,0.0000054963903,0.000008910296,2.73722e-7,6.6463656e-8,0.0000019829329,0.3585994,0.0003241853],"about_ca_topic_score_codex":0.0011942384,"about_ca_topic_score_gemma":0.000025932086,"teacher_disagreement_score":0.35855693,"about_ca_system_score_codex":0.00031749063,"about_ca_system_score_gemma":0.0005315832,"threshold_uncertainty_score":0.9999223},"labels":[],"label_agreement":null},{"id":"W4295094881","doi":"10.3390/v14091985","title":"Bovine Herpesvirus-1 Glycoprotein M Mediates the Translocation to the Golgi Apparatus and Packaging of VP8","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Government of Saskatchewan; Natural Sciences and Engineering Research Council of Canada","keywords":"Golgi apparatus; Biology; Virus; Viral replication; Transfection; Cell biology; Mutant; Tropism; Virology; Cell culture; Gene; Endoplasmic reticulum; Biochemistry; Genetics","score_opus":0.022343727759852057,"score_gpt":0.2824640662273504,"score_spread":0.2601203384674983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295094881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900023,0.0031310325,0.00017573293,0.0044754962,0.00015643475,0.0008176587,0.000065236774,0.00004523863,0.0011309235],"genre_scores_gemma":[0.9973965,0.00015998456,0.000112978596,0.001720185,0.00008407049,0.0002933232,0.0000076100478,0.000016863733,0.00020845435],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991662,0.000097348035,0.00019300917,0.00016410393,0.00022923565,0.00015008298],"domain_scores_gemma":[0.99943703,0.000111004105,0.00005771842,0.00030250044,0.000032175434,0.000059554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029227475,0.00010763564,0.00016029364,0.0000693339,0.00036233128,0.000016826834,0.000088047236,0.000021640757,0.00027483454],"category_scores_gemma":[0.000050150767,0.000059799462,0.00004580827,0.00036565147,0.00007242953,0.00004773572,0.000057340196,0.00015234952,0.00003157068],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011468192,0.0009998203,0.031159589,0.00011082518,0.0007160012,0.000037839858,0.0096685905,0.00032500975,0.026583426,0.0025484534,0.0075301398,0.9191735],"study_design_scores_gemma":[0.0017385563,0.00095084455,0.026769761,0.00006385228,0.000258188,0.000080155776,0.0018915501,0.0001790948,0.047749095,0.00028409276,0.91984797,0.00018683403],"about_ca_topic_score_codex":0.001043119,"about_ca_topic_score_gemma":0.00019494371,"teacher_disagreement_score":0.9189867,"about_ca_system_score_codex":0.000040156003,"about_ca_system_score_gemma":0.00005849611,"threshold_uncertainty_score":0.30092454},"labels":[],"label_agreement":null},{"id":"W4295214874","doi":"10.3390/v14091974","title":"Small-Angle X-ray Scattering (SAXS) Measurements of APOBEC3G Provide Structural Basis for Binding of Single-Stranded DNA and Processivity","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Worldwide Cancer Research","keywords":"APOBEC3G; Superhelix; Small-angle X-ray scattering; DNA; Chemistry; Tetramer; Processivity; Deamination; Crystallography; Biophysics; Cytosine; Cytidine deaminase; Biochemistry; DNA polymerase; Biology; DNA replication; Enzyme; Scattering","score_opus":0.10101856696847256,"score_gpt":0.29477524125457233,"score_spread":0.19375667428609977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295214874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801373,0.00073651527,0.00003328732,0.000042517662,0.00009406342,0.00047856005,0.0005292677,0.000017946637,0.000054122254],"genre_scores_gemma":[0.9994307,0.0000049827363,0.00025434187,0.00001921646,0.000007079513,0.00011805038,0.0000544537,0.000011459541,0.00009967921],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999166,0.00011318711,0.00021232663,0.0001995165,0.00006547677,0.00024346908],"domain_scores_gemma":[0.9995481,0.000118405,0.0001327486,0.00012242078,0.000057285422,0.000021035174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022673246,0.000109552995,0.00023334274,0.00011215913,0.0002351282,0.000007846521,0.00012624316,0.00003954214,0.0001685376],"category_scores_gemma":[0.00011012122,0.00009254829,0.00005575115,0.00009641416,0.00012800602,0.00006700365,0.00010362682,0.00007953853,0.0000034406594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045291753,0.00014867619,0.038005453,0.00017654372,0.0002533265,0.0000010176211,0.0004460285,0.000008946532,0.9539018,0.000004937817,0.000050893097,0.006549422],"study_design_scores_gemma":[0.0017223223,0.0006764248,0.006568637,0.000035833316,0.00005718432,0.0000073076867,0.00027870107,0.0000015865688,0.9896695,0.000025071264,0.0008674601,0.00008998895],"about_ca_topic_score_codex":0.00014015054,"about_ca_topic_score_gemma":0.000071281305,"teacher_disagreement_score":0.035767645,"about_ca_system_score_codex":0.000051132207,"about_ca_system_score_gemma":0.000070156035,"threshold_uncertainty_score":0.37740096},"labels":[],"label_agreement":null},{"id":"W4296106211","doi":"10.3390/v14092029","title":"Role of RNA Polymerase II Promoter-Proximal Pausing in Viral Transcription","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; RNA polymerase II; Transcription (linguistics); RNA polymerase; Virology; Polymerase; RNA; Virus; Viral replication; Chromatin; Promoter; Gene; Cell biology; Gene expression; Genetics","score_opus":0.048376767954315406,"score_gpt":0.30840718471110806,"score_spread":0.26003041675679267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296106211","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017759666,0.9805072,0.0000013965496,0.000005724815,0.0005305049,0.00048140084,0.0001916838,0.00004194208,0.00048051056],"genre_scores_gemma":[0.0076962453,0.99111885,0.000009368691,0.00005358976,0.000025247538,0.0001065214,0.00020600553,0.000049086462,0.0007350787],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99770045,0.0008186218,0.00075193006,0.0003351763,0.000045641867,0.0003481598],"domain_scores_gemma":[0.99925125,0.000114765084,0.00029910213,0.0003101834,0.000012821988,0.000011854572],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025661633,0.00034989315,0.0012177774,0.0004935132,0.00015197179,0.000009835753,0.00032974395,0.0003724151,0.0032289403],"category_scores_gemma":[0.00005213106,0.00030136423,0.000377056,0.0002162998,0.00014379936,0.00011589549,0.00015786201,0.00068023,0.00009622824],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024391184,0.00024143314,0.0000019767956,0.0010339655,0.00015377547,0.0000063655116,0.0003807893,4.1824205e-8,0.31395236,0.00012768517,0.00005921264,0.6837985],"study_design_scores_gemma":[0.00039341536,0.00048798724,0.0000061280016,0.0019355242,0.00019016293,0.00007430227,0.00011269576,1.169301e-7,0.075056374,0.000012248813,0.9214718,0.00025929383],"about_ca_topic_score_codex":0.00039012232,"about_ca_topic_score_gemma":0.000019845898,"teacher_disagreement_score":0.9214125,"about_ca_system_score_codex":0.00010034991,"about_ca_system_score_gemma":0.00022449059,"threshold_uncertainty_score":0.99994385},"labels":[],"label_agreement":null},{"id":"W4296108255","doi":"10.3390/v14092039","title":"SARS-CoV-2 Seroprevalence Study in Pediatric Patients and Health Care Workers Using Multiplex Antibody Immunoassays","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Ministerio de Ciencia e Innovación; Junta de Andalucía; Generalitat de Catalunya","keywords":"Seroprevalence; Medicine; Antibody; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Multiplex; Immunology; Serology; Internal medicine; Disease; Biology; Infectious disease (medical specialty); Bioinformatics","score_opus":0.11568350953825139,"score_gpt":0.43041492354699784,"score_spread":0.31473141400874644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296108255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99465084,0.0036941129,0.0000040571576,0.000032024254,0.00018669371,0.0012890138,0.000032045926,0.00005360546,0.00005758946],"genre_scores_gemma":[0.9865923,0.000031012685,0.00009198645,0.013117252,0.000065504006,0.00005729776,0.0000059822305,0.00003716219,0.0000015318619],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997743,0.0002696998,0.00037373474,0.00046376878,0.0006905298,0.00045923123],"domain_scores_gemma":[0.9993513,0.00007474957,0.000112041256,0.000338834,0.00008765798,0.000035371286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044358688,0.00019130534,0.00035350845,0.00046015196,0.0003143193,0.00003576204,0.00019156982,0.000040787636,0.0000059887225],"category_scores_gemma":[0.00009942807,0.00018564942,0.0000488134,0.00087610143,0.000049071794,0.00013374139,0.00039416156,0.00043408023,0.000009227534],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029938592,0.0006988076,0.9765738,0.00021172829,0.000022482565,0.00006379633,0.0033540875,0.000005194232,0.017296543,6.077672e-7,0.000112148045,0.0013614158],"study_design_scores_gemma":[0.0045403033,0.0013871551,0.9814164,0.000051341707,0.000045573528,0.00000696205,0.0065727984,0.00028334715,0.0034818617,0.0000022638853,0.0019846186,0.00022738974],"about_ca_topic_score_codex":0.0064167758,"about_ca_topic_score_gemma":0.00042548924,"teacher_disagreement_score":0.013814682,"about_ca_system_score_codex":0.0004532201,"about_ca_system_score_gemma":0.00046975134,"threshold_uncertainty_score":0.9700288},"labels":[],"label_agreement":null},{"id":"W4296753451","doi":"10.3390/v14092056","title":"CD163-Expressing Porcine Macrophages Support NADC30-like and NADC34-like PRRSV Infections","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"CD163; Porcine reproductive and respiratory syndrome virus; Biology; Virology; Tropism; Virus; Cell culture; Macrophage; Genetics","score_opus":0.03248907601906029,"score_gpt":0.251156641935578,"score_spread":0.21866756591651773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296753451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99474883,0.0009642216,0.000003315058,0.00038844603,0.0004261636,0.00018413833,0.00018459384,0.00023129539,0.0028690242],"genre_scores_gemma":[0.996793,0.0002280029,0.00004981743,0.0012744052,0.00019785334,0.00010270915,0.000025109364,0.0000028565994,0.0013262513],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987918,0.00009886426,0.00021690385,0.00035544002,0.00022144741,0.00031552435],"domain_scores_gemma":[0.999542,0.00016362879,0.00009724218,0.00006771235,0.000044773773,0.000084639],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017626138,0.00018293368,0.00019842573,0.000036141493,0.0020772363,0.00008939091,0.00014501966,0.000042871197,0.0021452815],"category_scores_gemma":[0.00003972015,0.00008561136,0.000068835434,0.0004363935,0.00015132192,0.00020582546,0.00046636467,0.00020962225,0.00006439294],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008362781,0.0005568535,0.28107962,0.000017117798,0.000120013996,0.000053384425,0.0004450538,0.000053433716,0.62532485,0.00074798346,0.06774001,0.02377803],"study_design_scores_gemma":[0.00018442523,0.0009211977,0.21662568,0.000006877481,0.000038837843,0.000105353625,0.0010884246,0.000013313642,0.0032329524,0.00021270603,0.7772456,0.0003246768],"about_ca_topic_score_codex":0.0015267701,"about_ca_topic_score_gemma":0.0010506414,"teacher_disagreement_score":0.70950556,"about_ca_system_score_codex":0.000050615403,"about_ca_system_score_gemma":0.000012850214,"threshold_uncertainty_score":0.9992219},"labels":[],"label_agreement":null},{"id":"W4296764426","doi":"10.3390/v14092024","title":"Co-Deletion of A238L and EP402R Genes from a Genotype IX African Swine Fever Virus Results in Partial Attenuation and Protection in Swine","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"International Development Research Centre","keywords":"African swine fever virus; Virulence; Biology; Virology; Genotype; Virus; Gene; Genetics","score_opus":0.06348790130252994,"score_gpt":0.2643805690809605,"score_spread":0.20089266777843057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296764426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981717,0.00043862793,0.000004336389,0.00091794,0.000026547057,0.00023889408,0.0001279866,0.0000142991785,0.0000596728],"genre_scores_gemma":[0.9993945,0.00016830032,0.000016699621,0.00019779762,0.00007559577,0.00004955888,0.00008081735,7.62982e-7,0.000015985086],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991385,0.00019768292,0.00022984987,0.0002258293,0.000090689355,0.00011745827],"domain_scores_gemma":[0.9997518,0.00008742247,0.00009659099,0.00002745794,0.000010480262,0.000026227468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032299594,0.00007207548,0.00014130161,0.000033328706,0.00008019539,0.000009013679,0.000050392915,0.000034020355,0.00012787731],"category_scores_gemma":[0.00007598584,0.0000370255,0.000016238382,0.00021437978,0.000041553583,0.0000837905,0.000064515596,0.00006521351,0.0000028804577],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013918795,0.00013837936,0.1814896,0.00000868446,0.00001121272,0.0000054369366,0.00021956966,0.00012565586,0.76869774,0.00011391702,0.00024758533,0.04755032],"study_design_scores_gemma":[0.00034460975,0.00027442063,0.98749995,0.000006125384,0.000008228512,3.5181534e-7,0.00027584922,0.000738924,0.0015385764,0.00044938596,0.008781158,0.000082440485],"about_ca_topic_score_codex":0.013355431,"about_ca_topic_score_gemma":0.004195155,"teacher_disagreement_score":0.8060103,"about_ca_system_score_codex":0.000020024449,"about_ca_system_score_gemma":0.0000030732733,"threshold_uncertainty_score":0.9932147},"labels":[],"label_agreement":null},{"id":"W4296764616","doi":"10.3390/v14092026","title":"Coxsackievirus Protease 2A Targets Host Protease ATG4A to Impair Autophagy","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Faculty of Medicine, University of British Columbia; Natural Sciences and Engineering Research Council of Canada; St. Paul's Foundation","keywords":"Autophagy; Protease; Coxsackievirus; Cell biology; Biology; Proteases; Gene silencing; Cleavage (geology); Cysteine protease; Virology; Virus; Biochemistry; Enzyme; Gene; Apoptosis; Enterovirus","score_opus":0.026259790126902393,"score_gpt":0.3085432128560583,"score_spread":0.2822834227291559,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296764616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98877335,0.0037332512,0.00009674616,0.001234043,0.00038758037,0.0036296088,0.00037296512,0.00051945803,0.0012530162],"genre_scores_gemma":[0.97126913,0.00004834226,0.000507296,0.023133902,0.00041331488,0.0023791308,0.00004986164,0.00009536458,0.0021036388],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976995,0.0001685367,0.00037570193,0.0005451374,0.0006617466,0.00054934906],"domain_scores_gemma":[0.99837095,0.000048932776,0.00011924844,0.0007289212,0.00008100445,0.00065094646],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00029171866,0.00031838403,0.0004271425,0.0002287316,0.00044406607,0.00003606631,0.00028447152,0.000064258296,0.006089816],"category_scores_gemma":[0.00016814416,0.00029136668,0.00020546764,0.00050314737,0.000073668656,0.00014657927,0.0002504359,0.00036955814,0.00090031984],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016844641,0.010062524,0.036249503,0.0008229458,0.001417622,0.009329361,0.004642233,0.00036391296,0.71606743,0.0036106056,0.16252695,0.03806225],"study_design_scores_gemma":[0.0038112735,0.002431775,0.03325684,0.00007989151,0.00017225042,0.00009686604,0.00029452197,0.00014174939,0.29239815,0.00039379255,0.666286,0.0006369067],"about_ca_topic_score_codex":0.00023801175,"about_ca_topic_score_gemma":0.0000030032604,"teacher_disagreement_score":0.503759,"about_ca_system_score_codex":0.00020662395,"about_ca_system_score_gemma":0.00045004042,"threshold_uncertainty_score":0.99995387},"labels":[],"label_agreement":null},{"id":"W4298002307","doi":"10.3390/v14102126","title":"Lessons Learned from the COVID-19 Pandemic and How Blood Operators Can Prepare for the Next Pandemic","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Canadian Blood Services; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Pandemic; Middle East respiratory syndrome coronavirus; Outbreak; Coronavirus disease 2019 (COVID-19); Middle East respiratory syndrome; Public health; Coronavirus; Medicine; Virology; Infectious disease (medical specialty); Disease; Pathology","score_opus":0.4813863944065468,"score_gpt":0.4770473003162098,"score_spread":0.0043390940903370034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298002307","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023230307,0.9899233,0.000019063895,0.0027230906,0.00021679232,0.0031627358,0.0014181129,0.00016275093,0.000051132636],"genre_scores_gemma":[0.00016111149,0.9029276,0.000012846685,0.09391861,0.0005804772,0.0020866294,0.00008009039,0.00011563923,0.00011702876],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.996983,0.00061309244,0.00038659657,0.00087076786,0.0005923821,0.00055416307],"domain_scores_gemma":[0.99012613,0.0082635805,0.00023553759,0.0011796895,0.000058911086,0.00013613208],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012024887,0.0005265527,0.001349248,0.00013253927,0.00086677016,0.0002766491,0.00089019485,0.00032657012,0.0001378031],"category_scores_gemma":[0.003498612,0.00026734528,0.0004784039,0.00044970145,0.00035202637,0.00007860164,0.00048825744,0.0010526578,0.000012588655],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018236284,0.000105957326,0.012677007,0.005121447,0.0018091749,0.000059143145,0.0010466612,2.9104572e-7,0.00014977818,0.00009684617,0.016510306,0.96224105],"study_design_scores_gemma":[0.001115297,0.00016340589,0.000012934482,0.00074570277,0.0028438543,0.0001510582,0.0008286604,0.000007336281,0.000018340857,0.00006151663,0.99374664,0.00030524776],"about_ca_topic_score_codex":0.002509829,"about_ca_topic_score_gemma":0.0018754975,"teacher_disagreement_score":0.97723633,"about_ca_system_score_codex":0.00031529914,"about_ca_system_score_gemma":0.0034568273,"threshold_uncertainty_score":0.9999779},"labels":[],"label_agreement":null},{"id":"W4298002654","doi":"10.3390/v14102113","title":"Promiscuous Inflammasomes: The False Dichotomy of RNA/DNA Virus-Induced Inflammasome Activation and Pyroptosis","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Canadian Institutes of Health Research; Public Health Agency of Canada","keywords":"Pyroptosis; Inflammasome; AIM2; NLRC4; Biology; Innate immune system; Virus; Caspase 1; Cell biology; Virology; Immune system; Immunology; Inflammation","score_opus":0.04337270821276203,"score_gpt":0.3030999458961236,"score_spread":0.2597272376833616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298002654","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1022911,0.8954037,0.0000044686753,0.000022246822,0.00018952414,0.0013637418,0.00008550061,0.000027046277,0.0006126645],"genre_scores_gemma":[0.0032359678,0.9951603,0.000015444708,0.00015028653,0.00021240102,0.00062501436,0.00032982483,0.000106114785,0.00016464658],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976156,0.00033730312,0.0007974429,0.0005765382,0.00030577002,0.0003673532],"domain_scores_gemma":[0.99812764,0.0001181838,0.000741131,0.000884861,0.000064595784,0.00006360732],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038996153,0.00055766635,0.00095181493,0.00019788295,0.000274783,0.000060925013,0.00061316043,0.0003949795,0.00013121529],"category_scores_gemma":[0.00030404777,0.0003958933,0.00042061112,0.0003448588,0.00018999576,0.000021725597,0.0005450205,0.0004126433,0.000013349661],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010291988,0.000110303954,0.00004462191,0.003288346,0.00090248446,0.0000038146404,0.0002246208,0.0000024584292,0.19312677,0.000110156776,0.0005977818,0.8014857],"study_design_scores_gemma":[0.00032899025,0.00024693838,0.000027692331,0.00050226034,0.0003130225,0.000008494152,0.000128896,4.004953e-7,0.08276823,0.000020557967,0.91522205,0.00043246642],"about_ca_topic_score_codex":0.00009110295,"about_ca_topic_score_gemma":0.000023727682,"teacher_disagreement_score":0.9146243,"about_ca_system_score_codex":0.000037702815,"about_ca_system_score_gemma":0.0003519452,"threshold_uncertainty_score":0.9998493},"labels":[],"label_agreement":null},{"id":"W4304636293","doi":"10.3390/v14102178","title":"Temperature Influences the Interaction between SARS-CoV-2 Spike from Omicron Subvariants and Human ACE2","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; University of Ottawa; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Fondation du CHUM","keywords":"Spike (software development); Glycoprotein; Receptor; Angiotensin-converting enzyme 2; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Neutralization; Biology; Virology; Chemistry; Biophysics; Molecular biology; Genetics; Virus; Medicine; Disease; Internal medicine","score_opus":0.08399562735672897,"score_gpt":0.3904613726843896,"score_spread":0.3064657453276606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304636293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99758583,0.0006888697,0.0000012117579,0.00064594066,0.00019743155,0.00029646687,0.00008763261,0.00006169105,0.00043490055],"genre_scores_gemma":[0.95381576,0.000005211112,0.000015428419,0.045682423,0.00038047857,0.000047975427,0.000012487024,0.000021961421,0.000018293957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871165,0.00014894662,0.00021217934,0.00032172308,0.00037174072,0.0002337476],"domain_scores_gemma":[0.99936795,0.00016483391,0.00007249221,0.00033196725,0.000042403728,0.000020328896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027356742,0.00015185526,0.00023029266,0.00012813906,0.0004979824,0.00011588062,0.00022792307,0.00007289481,0.000051036466],"category_scores_gemma":[0.00008374405,0.00010658459,0.000055134482,0.00024503891,0.00012768032,0.00019451621,0.000257804,0.0006167221,0.000045266195],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013005224,0.00003997388,0.27384296,0.000011946413,0.000066209046,0.000022942293,0.0005026535,1.2000706e-7,0.72217524,0.000035636036,0.002305093,0.0008671458],"study_design_scores_gemma":[0.0006992887,0.00023701176,0.11902628,0.00003469576,0.0000613981,0.000015937841,0.0008058108,0.0000055375135,0.56715345,0.00020036224,0.3116427,0.00011751861],"about_ca_topic_score_codex":0.0040415176,"about_ca_topic_score_gemma":0.00023098805,"teacher_disagreement_score":0.30933762,"about_ca_system_score_codex":0.00009288648,"about_ca_system_score_gemma":0.0000968245,"threshold_uncertainty_score":0.6109593},"labels":[],"label_agreement":null},{"id":"W4304775599","doi":"10.3390/v14102241","title":"Ampliseq for Illumina Technology Enables Detailed Molecular Epidemiology of Rabies Lyssaviruses from Infected Formalin-Fixed Paraffin-Embedded Tissues","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Amplicon; Rabies virus; Rabies; Biology; Multiplex; Genome; Massive parallel sequencing; Primer (cosmetics); DNA sequencing; Virology; Lyssavirus; Computational biology; Shotgun sequencing; Ion semiconductor sequencing; Polymerase chain reaction; Genetics; Rhabdoviridae; Gene","score_opus":0.034568242311284435,"score_gpt":0.2976384653735368,"score_spread":0.26307022306225236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304775599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9549128,0.030215556,0.00997221,0.0014730515,0.0007595083,0.0010454948,0.0010975735,0.00042526762,0.00009858424],"genre_scores_gemma":[0.99279314,0.00022505998,0.0016056031,0.003011267,0.00004880575,0.0013713839,0.0006161754,0.000057029014,0.00027154668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9952016,0.0016693603,0.0013257195,0.0007713942,0.000057397025,0.0009745181],"domain_scores_gemma":[0.9934038,0.00468068,0.0008526625,0.0008368539,0.00018065659,0.00004534076],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011797819,0.0004789523,0.0016954334,0.00050028705,0.00064275606,0.0000047363696,0.00085430744,0.0007048301,0.0011656028],"category_scores_gemma":[0.003919476,0.00044625902,0.0003716998,0.0004207953,0.0012523114,0.00015614435,0.00047828027,0.00061667257,0.00011141935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002416369,0.00043335493,0.12984854,0.000057061865,0.0017376781,0.000016783304,0.00044574484,0.0010114155,0.7833001,0.07141242,0.0055078305,0.003812723],"study_design_scores_gemma":[0.0061419373,0.0018169428,0.007133643,0.0000488747,0.0005640187,0.00007338873,0.0017387778,0.00011263817,0.66559225,0.08197138,0.23386487,0.0009412635],"about_ca_topic_score_codex":0.0005261595,"about_ca_topic_score_gemma":0.00012792731,"teacher_disagreement_score":0.22835703,"about_ca_system_score_codex":0.00006537219,"about_ca_system_score_gemma":0.00013775799,"threshold_uncertainty_score":0.9997989},"labels":[],"label_agreement":null},{"id":"W4304787154","doi":"10.3390/v14102185","title":"Human Herpesvirus 8 in Australia: DNAemia and Cumulative Exposure in Blood Donors","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Redeemer University","funders":"Australian Dental Research Foundation","keywords":"Virology; Human herpesvirus 6; Human herpesvirus; Biology; Medicine; Immunology; Virus; Herpesviridae; Viral disease","score_opus":0.04140410045695909,"score_gpt":0.3234409449777182,"score_spread":0.2820368445207591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304787154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99729264,0.001012163,1.4901369e-7,0.00017320362,0.000059292965,0.00023458451,0.000024415445,0.000027762144,0.0011757931],"genre_scores_gemma":[0.9981711,0.00011450085,0.000016849524,0.0009397602,0.000026341912,0.00006652695,0.000009522376,0.000016458413,0.0006389434],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990542,0.000072319635,0.00022594543,0.0002331876,0.00017961806,0.0002347355],"domain_scores_gemma":[0.99972695,0.000022438666,0.00006196408,0.00012057623,0.000010359973,0.000057730347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000159367,0.00012023419,0.0002460941,0.00017957209,0.00008846681,0.000011368833,0.000057068264,0.00006587468,0.0005230762],"category_scores_gemma":[0.000027891245,0.000121898665,0.000034624918,0.00034579224,0.000048853144,0.00008117667,0.000061545405,0.00034990214,0.0000050788285],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014744105,0.0003051088,0.98989856,0.000024615258,0.00004548921,0.00018682764,0.0020497472,0.0002844075,0.0049806493,0.00026990913,0.001139714,0.00066755706],"study_design_scores_gemma":[0.013535546,0.0012762116,0.9681287,0.00009199205,0.000111735826,0.000016960475,0.0052456073,0.000027909842,0.0025950468,0.0014699305,0.00711597,0.0003843841],"about_ca_topic_score_codex":0.012648116,"about_ca_topic_score_gemma":0.004475645,"teacher_disagreement_score":0.02176983,"about_ca_system_score_codex":0.00014323225,"about_ca_system_score_gemma":0.00004973237,"threshold_uncertainty_score":0.99392676},"labels":[],"label_agreement":null},{"id":"W4304789322","doi":"10.3390/v14102211","title":"Transcriptome Analysis of Duck and Chicken Brains Infected with Aquatic Bird Bornavirus-1 (ABBV-1)","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"KEGG; Transcriptome; Biology; Gene; Immune system; Genome; Downregulation and upregulation; Innate immune system; RNA-Seq; Gene expression; Genetics","score_opus":0.015485112262074927,"score_gpt":0.24730867018458028,"score_spread":0.23182355792250536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304789322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99623877,0.0028305242,0.000047777794,0.00009868514,0.00012374694,0.00014233554,0.00013823793,0.00009390617,0.00028603955],"genre_scores_gemma":[0.9984477,0.000109854715,0.000017737253,0.0005166469,0.000004008601,0.00001898282,0.000042570915,0.00002315746,0.0008193536],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988568,0.0003717763,0.0002706528,0.00022494777,0.000051927396,0.00022392487],"domain_scores_gemma":[0.99939126,0.00018685307,0.00011862488,0.00026117277,0.000025629852,0.000016456705],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017899122,0.00015504805,0.00041799148,0.00057396106,0.00020501012,0.000010705744,0.00017024348,0.00006368917,0.0018255842],"category_scores_gemma":[0.000046390247,0.00012624265,0.000104104,0.0007859422,0.0002551901,0.00008178439,0.000075131196,0.00023724776,0.000039734266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017562672,0.00021683805,0.019003745,0.000011069753,0.002781103,0.000006598765,0.0019723733,0.000047603997,0.97231376,0.00049926573,0.000487988,0.0009033699],"study_design_scores_gemma":[0.004766231,0.0043013175,0.22996998,0.000048257974,0.0035275763,0.00017344645,0.0032327543,0.00007380252,0.55759645,0.000045692672,0.19549832,0.00076620025],"about_ca_topic_score_codex":0.001151954,"about_ca_topic_score_gemma":0.00023064156,"teacher_disagreement_score":0.41471735,"about_ca_system_score_codex":0.000023026823,"about_ca_system_score_gemma":0.000060279548,"threshold_uncertainty_score":0.99908686},"labels":[],"label_agreement":null},{"id":"W4304789431","doi":"10.3390/v14102199","title":"SARS-CoV-2 Transmission in Belgian French-Speaking Primary Schools: An Epidemiological Pilot Study","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fédération Wallonie-Bruxelles","keywords":"Asymptomatic; Epidemiology; Medicine; Transmission (telecommunications); Pandemic; Family medicine; Pediatrics; Prospective cohort study; Coronavirus disease 2019 (COVID-19); Demography; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Disease; Internal medicine; Infectious disease (medical specialty)","score_opus":0.18511458024146446,"score_gpt":0.3779579088273479,"score_spread":0.19284332858588346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304789431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646455,0.00045783367,0.00019365804,0.00016831313,0.00018484757,0.00065230415,0.000005336573,0.00033019678,0.0015429836],"genre_scores_gemma":[0.9845415,0.0000051182697,0.0012887199,0.013875864,0.00013396885,0.000104351,0.0000063228094,0.00003407731,0.000010117218],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975841,0.0006227838,0.00053833285,0.0005220556,0.0003732904,0.00035943178],"domain_scores_gemma":[0.99918133,0.00026055964,0.00011919641,0.00033664983,0.000033043114,0.00006924995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012388354,0.00021923824,0.00047507643,0.00031067655,0.0003010394,0.000023654156,0.00018388018,0.000048557766,0.00012376308],"category_scores_gemma":[0.00056131656,0.00018474906,0.00006616159,0.00059806695,0.00004080687,0.00018551722,0.00011280949,0.0008601712,0.000031835145],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033979944,0.0019943297,0.18635793,0.000022326964,0.000024987055,0.00026281475,0.00057073054,0.00001416344,0.7931511,0.0000134092525,0.00021981275,0.017028598],"study_design_scores_gemma":[0.008452516,0.023056593,0.6057369,0.00026907935,0.00017357607,0.00044375533,0.003250448,0.0015728783,0.3009773,0.0005654742,0.05463316,0.000868311],"about_ca_topic_score_codex":0.0021424738,"about_ca_topic_score_gemma":0.00020539269,"teacher_disagreement_score":0.49217382,"about_ca_system_score_codex":0.00022005843,"about_ca_system_score_gemma":0.00010173612,"threshold_uncertainty_score":0.7533848},"labels":[],"label_agreement":null},{"id":"W4306404290","doi":"10.3390/v14102263","title":"Efficacy of Different Testing Scenarios in Reducing Transfusion-Transmitted Hepatitis B Virus (TT-HBV) Infection Risk","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; University of British Columbia","funders":"Grifols","keywords":"Nat; HBsAg; Hepatitis B virus; Medicine; Serology; Virology; Infectivity; Transmission (telecommunications); Hepatitis B; Immunology; Antibody; Virus; Computer science","score_opus":0.03439791367615768,"score_gpt":0.2836444869314562,"score_spread":0.24924657325529853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306404290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762374,0.00043917805,0.00009766623,0.00009346077,0.00031669476,0.00077906734,0.000089717534,0.00015690502,0.00040354626],"genre_scores_gemma":[0.9970285,0.0020926988,0.00030939022,0.00022939089,0.00009453053,0.00015400394,0.00001570461,0.000048666723,0.000027113028],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99778557,0.0002972717,0.0006601146,0.000401584,0.00050060585,0.00035485852],"domain_scores_gemma":[0.9987102,0.00060459087,0.0001983443,0.00031042696,0.00008600469,0.00009041315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003324777,0.00024567384,0.00057650334,0.00042358128,0.00036653416,0.000011282571,0.000092867296,0.00006387929,0.00040842348],"category_scores_gemma":[0.000985987,0.00023467798,0.00013304874,0.0008726661,0.00009414194,0.00009777988,0.00009665062,0.0005804671,0.000012472014],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002737899,0.00076037756,0.8861469,0.000095055926,0.000084742256,0.000047581845,0.002341337,0.0005868153,0.09040398,0.000013575748,0.000116593765,0.019129246],"study_design_scores_gemma":[0.0023671598,0.0007660824,0.9648396,0.00031164254,0.00015966101,0.000023651315,0.0000558168,0.0010512598,0.029404826,0.000045961177,0.0007571133,0.0002172201],"about_ca_topic_score_codex":0.18492745,"about_ca_topic_score_gemma":0.02570636,"teacher_disagreement_score":0.1592211,"about_ca_system_score_codex":0.0002777817,"about_ca_system_score_gemma":0.000104133884,"threshold_uncertainty_score":0.992072},"labels":[],"label_agreement":null},{"id":"W4306404447","doi":"10.3390/v14102272","title":"SARS-CoV-2 Variant-Specific Infectivity and Immune Profiles Are Detectable in a Humanized Lung Mouse Model","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Government of Saskatchewan; Canadian Institutes of Health Research","keywords":"Infectivity; Immune system; Humanized mouse; Biology; Virology; Lung; Viral replication; Virus; Context (archaeology); Immunology; Pathogenesis; Viral pathogenesis; Medicine","score_opus":0.07073436575273823,"score_gpt":0.34093590473702173,"score_spread":0.2702015389842835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306404447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995613,0.0021337138,0.00030174418,0.00006252957,0.00005694263,0.0007975577,0.00005685831,0.00014129805,0.0008363712],"genre_scores_gemma":[0.990857,0.000027283053,0.00016714013,0.008404041,0.000052682844,0.00039139492,0.0000026075186,0.000054323267,0.000043518],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981321,0.0001770455,0.00030428648,0.00047588637,0.00045186805,0.00045882692],"domain_scores_gemma":[0.99920744,0.00014593887,0.00009099551,0.00046355082,0.00006485675,0.000027229784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005600367,0.00021637708,0.00045885713,0.00041860933,0.00028903474,0.00006689571,0.00017729908,0.00008083365,0.000035013396],"category_scores_gemma":[0.00016145155,0.00020847833,0.00007566315,0.0005152269,0.00009971479,0.00021491449,0.00040746984,0.00058623904,0.00001973947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082242175,0.00044883692,0.03921892,0.00013245398,0.000045731114,0.00017260098,0.00048255557,0.000018396266,0.95716137,0.00032289323,0.00037648884,0.00079735025],"study_design_scores_gemma":[0.0037246062,0.0002433685,0.0052161166,0.000055883036,0.00002933052,0.0000654486,0.00026869134,0.014698504,0.96104425,0.00043846614,0.013921472,0.00029388507],"about_ca_topic_score_codex":0.0012212661,"about_ca_topic_score_gemma":0.00023661202,"teacher_disagreement_score":0.034002803,"about_ca_system_score_codex":0.0002760767,"about_ca_system_score_gemma":0.00022162803,"threshold_uncertainty_score":0.85015},"labels":[],"label_agreement":null},{"id":"W4307171521","doi":"10.3390/v14112327","title":"Pre-Existing HSV-1 Immunity Enhances Anticancer Efficacy of a Novel Immune-Stimulating Oncolytic Virus","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Biotech (Canada)","funders":"National Key Research and Development Program of China","keywords":"Oncolytic virus; ELISPOT; Herpes simplex virus; Immune system; Medicine; Immunity; Immunology; Virus; Cancer research; T cell; Virology","score_opus":0.060237535315854795,"score_gpt":0.3755266359186261,"score_spread":0.3152891006027713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307171521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99596536,0.0023681326,0.00034738667,0.000023786568,0.00014013913,0.0003409035,0.00012673254,0.000027543823,0.00066000276],"genre_scores_gemma":[0.9984476,0.00013980608,0.00063736015,0.00023022317,0.00015226222,0.00006299887,0.000048875798,0.000048625992,0.00023227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981513,0.0002199696,0.00043649392,0.00038266316,0.0004118748,0.0003976988],"domain_scores_gemma":[0.9988101,0.00015899994,0.00023018233,0.0006324839,0.00009921002,0.00006903266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068233337,0.0002021253,0.00027772397,0.000098771605,0.00037789732,0.000024637982,0.0005664078,0.00006701883,0.00029684062],"category_scores_gemma":[0.00036694377,0.00021272429,0.00014485835,0.00031799835,0.00017935706,0.0000084160365,0.000609021,0.00028595375,0.000007229975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023555385,0.00045975737,0.0009797466,0.000031590724,0.000117211086,0.0000021598466,0.00021128354,0.0067278235,0.9855337,0.000021229804,0.00005086024,0.003509085],"study_design_scores_gemma":[0.0015004021,0.0028301128,0.0022043025,0.000028087281,0.000023101966,0.0000072797648,0.00016094038,0.0009065348,0.9877104,0.000011642861,0.004363956,0.0002532285],"about_ca_topic_score_codex":0.00056093483,"about_ca_topic_score_gemma":0.000097165044,"teacher_disagreement_score":0.0058212886,"about_ca_system_score_codex":0.000059930393,"about_ca_system_score_gemma":0.0002792172,"threshold_uncertainty_score":0.8674645},"labels":[],"label_agreement":null},{"id":"W4307436718","doi":"10.3390/v14112371","title":"Feasibility of Polyclonal Avian Immunoglobulins (IgY) as Prophylaxis against Human Norovirus Infection","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases; University of Alberta","keywords":"Norovirus; Virology; Antibody; Neutralization; Titer; Immunization; Outbreak; Biology; Polyclonal antibodies; Diarrhea; Virus; Microbiology; Medicine; Immunology","score_opus":0.07068777514157712,"score_gpt":0.3766414799678833,"score_spread":0.3059537048263061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307436718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996969,0.0002788422,0.000016723667,0.00024647478,0.00017227628,0.00044465816,0.00011975862,0.00006414605,0.0016881463],"genre_scores_gemma":[0.9978645,0.00012060076,0.00011192562,0.0013810762,0.00011922915,0.000071520226,0.00008159453,0.00001937243,0.00023018409],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99814403,0.00035644506,0.00043087036,0.0003071816,0.0003803571,0.00038112068],"domain_scores_gemma":[0.9992308,0.00002495911,0.00013037045,0.00037177643,0.000080257356,0.00016185283],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005006811,0.00014014174,0.00038059405,0.00018414334,0.00027642315,0.000008577711,0.00013585827,0.000057408768,0.0011209053],"category_scores_gemma":[0.0004608524,0.00013090293,0.00017381726,0.00025336983,0.00022339675,0.00008745548,0.00024164093,0.0004666958,0.000056865058],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010485362,0.0005481027,0.7201922,0.000057406975,0.000058587375,0.000057428093,0.000051530693,0.000020933094,0.27284732,0.00009929813,0.00079813524,0.0042204983],"study_design_scores_gemma":[0.0020408963,0.007894353,0.96554065,0.000037978833,0.00001927398,0.00012715039,0.0000887913,0.000021205364,0.008257916,0.00032107855,0.015508419,0.00014228882],"about_ca_topic_score_codex":0.004838885,"about_ca_topic_score_gemma":0.00021629367,"teacher_disagreement_score":0.26458943,"about_ca_system_score_codex":0.00023806316,"about_ca_system_score_gemma":0.00014159433,"threshold_uncertainty_score":0.9997922},"labels":[],"label_agreement":null},{"id":"W4307546461","doi":"10.3390/v14112356","title":"Isolation, Characterization, and Genome Analysis of a Novel Bacteriophage, Escherichia Phage vB_EcoM-4HA13, Representing a New Phage Genus in the Novel Phage Family Chaseviridae","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Laurentian University; NOSM University; University of Guelph; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Bacteriophage; Lytic cycle; Biology; Microbiology; Virulence; Integrase; Virology; Escherichia coli; Phage therapy; Serotype; Genetics; Gene; Virus","score_opus":0.030676903158991846,"score_gpt":0.2621387428717381,"score_spread":0.23146183971274625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307546461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876322,0.00015906394,0.010564652,0.00020440253,0.00012834293,0.00039450437,0.0005418303,0.000037344103,0.00033765464],"genre_scores_gemma":[0.9951448,0.00007580527,0.0016278231,0.0018126954,0.000072373485,0.00006135744,0.0002179496,0.00003162269,0.0009555886],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980696,0.00012152723,0.00063528074,0.00054549734,0.00028743982,0.00034065763],"domain_scores_gemma":[0.99886435,0.000101444515,0.0004319754,0.00050011446,0.000016018155,0.00008607004],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00047861002,0.00024895076,0.000388303,0.00026996018,0.00040573685,0.00013056504,0.00040601465,0.00005284477,0.0035180934],"category_scores_gemma":[0.000052094045,0.000229289,0.00015486941,0.0019516755,0.000116245035,0.00068195054,0.0004909197,0.00028459998,0.000024683519],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003580926,0.00041547793,0.008938207,0.0000078065605,0.00014738772,0.0000082889665,0.0020262047,0.0008798132,0.98659563,0.000016680122,0.000103654645,0.00082503434],"study_design_scores_gemma":[0.0007707962,0.000062130115,0.93903303,0.00000718864,0.00029156572,0.000022536424,0.00048266762,0.0041397936,0.00322836,0.0000022493648,0.05169868,0.00026098167],"about_ca_topic_score_codex":0.0028519249,"about_ca_topic_score_gemma":0.00033951146,"teacher_disagreement_score":0.98336726,"about_ca_system_score_codex":0.00011237108,"about_ca_system_score_gemma":0.000029519346,"threshold_uncertainty_score":0.99739283},"labels":[],"label_agreement":null},{"id":"W4307548592","doi":"10.3390/v14112336","title":"SARS-CoV-2 Seroprevalence among Canadian Blood Donors: The Advance of Omicron","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Canadian Blood Services; University of Ottawa","funders":"Government of Canada; Canadian Blood Services","keywords":"Seroprevalence; Medicine; Logistic regression; Demography; Population; Internal medicine; Serology; Antibody; Immunology; Environmental health","score_opus":0.0456050874433474,"score_gpt":0.33386956725535955,"score_spread":0.28826447981201214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307548592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951709,0.0017516036,0.000003438098,0.00028178605,0.000134588,0.00039582019,0.00007886232,0.00003488826,0.0021481316],"genre_scores_gemma":[0.9453325,0.000036958176,0.000047879876,0.054331835,0.000083420375,0.00008743242,0.0000014711742,0.000027082777,0.00005142074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985973,0.00010224441,0.00022515588,0.00027024877,0.00041387006,0.0003911319],"domain_scores_gemma":[0.9991214,0.00011960355,0.00007583536,0.0005666734,0.0000760942,0.000040378207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030468326,0.00013138913,0.00021499742,0.00017974946,0.00024583054,0.00001871852,0.00042198296,0.000040945626,0.00006641376],"category_scores_gemma":[0.00014835922,0.00010160714,0.000084763,0.00045168115,0.00021583664,0.00010287882,0.00015602603,0.00036155526,0.000044237153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011723147,0.000101418904,0.2963222,0.00008494833,0.00006514016,0.0000948559,0.00041506873,0.000004648053,0.69992167,0.00012500661,0.0017871468,0.00096066104],"study_design_scores_gemma":[0.0006042648,0.0002185929,0.013220387,0.000043992204,0.000058028854,0.000035356436,0.00028190433,0.000051740644,0.741894,0.000052369065,0.24343057,0.00010881635],"about_ca_topic_score_codex":0.20240386,"about_ca_topic_score_gemma":0.10049282,"teacher_disagreement_score":0.2831018,"about_ca_system_score_codex":0.00014782531,"about_ca_system_score_gemma":0.0006037877,"threshold_uncertainty_score":0.91592085},"labels":[],"label_agreement":null},{"id":"W4307869847","doi":"10.3390/v14112414","title":"Evolutionary Dynamics of Whole-Genome Influenza A/H3N2 Viruses Isolated in Myanmar from 2015 to 2019","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; International Development Research Centre; Japan Agency for Medical Research and Development","keywords":"Phylogenetic tree; Clade; Biology; Hemagglutinin (influenza); Genetic diversity; Genome; Strain (injury); Genetics; Phylogenetics; Virology; Neuraminidase; Subclade; Virus; Evolutionary biology; Gene; Population","score_opus":0.06828750269911701,"score_gpt":0.37074955044581315,"score_spread":0.30246204774669616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307869847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836501,0.00830751,0.00005893244,0.0010687459,0.00022270311,0.00094684085,0.0051572924,0.00011727442,0.0004706048],"genre_scores_gemma":[0.97889507,0.00031953372,0.0020177064,0.01667241,0.0002588345,0.000412129,0.00038007362,0.0001491392,0.0008951218],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970347,0.00021979012,0.0007161618,0.0004993973,0.0009475131,0.0005824353],"domain_scores_gemma":[0.99838626,0.00036678443,0.00015630033,0.00067237637,0.00020982382,0.00020843724],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040298383,0.00028737998,0.00065397687,0.00079630635,0.00021206279,0.000015811554,0.0004033922,0.000097493416,0.0011507538],"category_scores_gemma":[0.0007089788,0.00028744256,0.00012177775,0.001170367,0.00017982692,0.00021263523,0.00097013154,0.0005845889,0.00047461723],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009335668,0.0019030692,0.5697198,0.00023501506,0.00095619494,0.0003670598,0.0056189927,0.009777608,0.35170674,0.0011406875,0.047590856,0.0016482983],"study_design_scores_gemma":[0.004510834,0.0021754205,0.45242244,0.00026414177,0.00014104712,0.000019245635,0.002951856,0.0020814147,0.0021293017,0.0013327549,0.53119195,0.0007795772],"about_ca_topic_score_codex":0.0064623253,"about_ca_topic_score_gemma":0.00045599384,"teacher_disagreement_score":0.4836011,"about_ca_system_score_codex":0.00092322915,"about_ca_system_score_gemma":0.0003575336,"threshold_uncertainty_score":0.9999578},"labels":[],"label_agreement":null},{"id":"W4307989701","doi":"10.3390/v14112416","title":"Characterizing Longitudinal Antibody Responses in Recovered Individuals Following COVID-19 Infection and Single-Dose Vaccination: A Prospective Cohort Study","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Coastal Health; Children's & Women's Health Centre of British Columbia; B.C. Women's Hospital & Health Centre; BC Children's Hospital; Provincial Health Services Authority; Surrey Memorial Hospital; University of British Columbia","funders":"Genome British Columbia","keywords":"Coronavirus disease 2019 (COVID-19); Vaccination; Prospective cohort study; Medicine; 2019-20 coronavirus outbreak; Virology; Antibody; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Cohort; Longitudinal study; Immunology; Cohort study; Internal medicine; Outbreak; Infectious disease (medical specialty); Disease; Pathology","score_opus":0.08575068379825357,"score_gpt":0.40531458401311343,"score_spread":0.31956390021485986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307989701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99665344,0.00029138217,0.000021126965,0.00018859562,0.00020444275,0.0022061542,0.000033595417,0.00012566405,0.000275583],"genre_scores_gemma":[0.9886825,0.0000072081993,0.000023696202,0.010597811,0.00008723414,0.0005383099,0.000012453716,0.00003224193,0.00001855538],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975102,0.0004925816,0.0003719055,0.00059287203,0.00070600706,0.00032641727],"domain_scores_gemma":[0.99900687,0.0004587658,0.00012789073,0.00027715077,0.000061814004,0.00006749498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018071366,0.0002004491,0.0004146412,0.0008320502,0.00044760923,0.0001141606,0.00010079459,0.000057969588,0.000065217],"category_scores_gemma":[0.0018126575,0.00020454449,0.00007588562,0.0010252076,0.000032484193,0.00038225827,0.00028419535,0.0004174012,0.000009005362],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014033848,0.0010857384,0.894447,0.00005321243,0.000190713,0.00043645044,0.0019495358,0.0000010404287,0.099744685,0.000011883689,0.00002460869,0.0006517167],"study_design_scores_gemma":[0.0039050465,0.0017679718,0.9765088,0.000033866225,0.00010951279,0.00010244283,0.0009340944,0.000020371146,0.0073750704,0.00007146917,0.0089714695,0.00019988242],"about_ca_topic_score_codex":0.0013772433,"about_ca_topic_score_gemma":0.00026472996,"teacher_disagreement_score":0.092369616,"about_ca_system_score_codex":0.0007694203,"about_ca_system_score_gemma":0.00044894454,"threshold_uncertainty_score":0.8341082},"labels":[],"label_agreement":null},{"id":"W4308117580","doi":"10.3390/v14112395","title":"Interplay between the Lung Microbiome, Pulmonary Immunity and Viral Reservoirs in People Living with HIV under Antiretroviral Therapy","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University; McGill University Health Centre; Université de Montréal; Université du Québec à Montréal","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Microbiome; Lung; Bronchoalveolar lavage; Immune system; CD8; Biology; Immunophenotyping; Immunity; Medicine; Flow cytometry; Internal medicine; Genetics","score_opus":0.017280479527075066,"score_gpt":0.2820959347803722,"score_spread":0.26481545525329714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308117580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99732834,0.00084912684,0.000015662736,0.00096209603,0.00006556177,0.00037885158,0.000044905806,0.00006157417,0.0002938667],"genre_scores_gemma":[0.9985667,0.00013145585,0.000025530013,0.0008199776,0.000041829924,0.000078595156,0.000016852144,0.000031096522,0.000287989],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988409,0.0002380766,0.00020571523,0.00025571164,0.00020872793,0.00025083724],"domain_scores_gemma":[0.99928266,0.00025055656,0.00007408981,0.00031374692,0.000016318798,0.00006264585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002495215,0.00018030833,0.0002636497,0.0001964696,0.00037177088,0.000039573344,0.00013452697,0.000035920948,0.00012348458],"category_scores_gemma":[0.000017092523,0.00011730912,0.000050280767,0.00038624328,0.00010233838,0.0001152238,0.0002143066,0.00042086,0.000006428893],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003470561,0.00023244569,0.9530803,0.000017158078,0.00011203866,0.00005781546,0.0007468152,0.000022857706,0.04400817,0.000015959944,0.00011089061,0.0012485038],"study_design_scores_gemma":[0.0011851791,0.0008400166,0.9930078,0.00006679508,0.00004446656,0.0002733441,0.001348626,0.000116088646,0.0018048622,0.000019427189,0.0011506025,0.00014284],"about_ca_topic_score_codex":0.00094600493,"about_ca_topic_score_gemma":0.000095214826,"teacher_disagreement_score":0.042203307,"about_ca_system_score_codex":0.00019812708,"about_ca_system_score_gemma":0.00006317216,"threshold_uncertainty_score":0.47837272},"labels":[],"label_agreement":null},{"id":"W4308332179","doi":"10.3390/v14112445","title":"CXCL10 Chemokine: A Critical Player in RNA and DNA Viral Infections","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sharjah Research Academy; Terry Fox Foundation","keywords":"CXCL10; Chemokine; CXCR3; Chemokine receptor; Biology; RNA; CCL13; Immune system; CXCL9; Cell biology; Immunology; Virology; Genetics; Gene","score_opus":0.06356703907141598,"score_gpt":0.3617303434146256,"score_spread":0.29816330434320965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308332179","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009691577,0.9955812,0.0000016605873,0.000026386106,0.0010452117,0.00027026935,0.00013306917,0.000066276414,0.0019067391],"genre_scores_gemma":[0.00065541867,0.9974768,0.0000042431757,0.00025656054,0.00004006725,0.00020110197,0.00007866449,0.000042142983,0.0012450138],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981529,0.00060629303,0.00047430792,0.0003684488,0.000030455518,0.00036756173],"domain_scores_gemma":[0.9985879,0.0010152363,0.000087596636,0.00027484025,0.000014415321,0.00001998589],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020817123,0.00033923436,0.001014449,0.000425917,0.00018602713,0.00003332675,0.00021152328,0.00043033026,0.0057559405],"category_scores_gemma":[0.00062313036,0.00028836683,0.00021779019,0.0001989561,0.0002706277,0.000104563886,0.00030478777,0.00100591,0.00058521057],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016791398,0.00052063965,0.000021778578,0.0027415901,0.00041287116,0.00006222371,0.00018715078,5.887409e-8,0.0026905397,0.0034073638,0.007703355,0.9820845],"study_design_scores_gemma":[0.00030024728,0.00023414858,0.000012399471,0.0009497537,0.00017965508,0.00038798063,0.000033455366,6.597259e-8,0.00067925896,0.000023055205,0.9969077,0.0002922433],"about_ca_topic_score_codex":0.00012527207,"about_ca_topic_score_gemma":0.000023852037,"teacher_disagreement_score":0.9892044,"about_ca_system_score_codex":0.00009732447,"about_ca_system_score_gemma":0.00018224015,"threshold_uncertainty_score":0.99995685},"labels":[],"label_agreement":null},{"id":"W4308718495","doi":"10.3390/v14112384","title":"Studying the Interactions of U24 from HHV-6 in Order to Further Elucidate Its Potential Role in MS","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Heteronuclear single quantum coherence spectroscopy; Heteronuclear molecule; Chemistry; Biology; Biochemistry; Molecular biology; Cell biology; Stereochemistry; Two-dimensional nuclear magnetic resonance spectroscopy; Nuclear magnetic resonance spectroscopy","score_opus":0.050138214385421515,"score_gpt":0.3481862490778455,"score_spread":0.298048034692424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308718495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957734,0.0005200398,0.000018275197,0.0015948704,0.00015800018,0.00047094643,0.000092220864,0.0000151667855,0.0013570872],"genre_scores_gemma":[0.9980784,0.00004209712,0.00005186941,0.001106342,0.0000989147,0.00013238845,0.000009167983,0.000022453258,0.00045838978],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987478,0.00014487002,0.0002855413,0.00022220286,0.0003638553,0.00023569274],"domain_scores_gemma":[0.99943256,0.000109490036,0.00004483893,0.00027521062,0.00007895833,0.00005894009],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003340499,0.000095595744,0.00022151192,0.00031920272,0.00009058799,0.000020639678,0.00018781087,0.000023738792,0.0048737316],"category_scores_gemma":[0.00015640809,0.00007283887,0.00003891328,0.0010854236,0.000026016509,0.000086588465,0.0003069232,0.00044766697,0.00013242208],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029680391,0.0018578114,0.14573666,0.000034756922,0.00021339943,0.00021190046,0.018486055,0.0055438927,0.78043556,0.00012091185,0.003377048,0.041013967],"study_design_scores_gemma":[0.005809067,0.00081421755,0.48317608,0.00022201188,0.00009415596,0.000025660154,0.023378469,0.0055626445,0.068945944,0.00037322598,0.4111168,0.00048170047],"about_ca_topic_score_codex":0.011730431,"about_ca_topic_score_gemma":0.005969843,"teacher_disagreement_score":0.7114896,"about_ca_system_score_codex":0.000113121416,"about_ca_system_score_gemma":0.00012923214,"threshold_uncertainty_score":0.99603593},"labels":[],"label_agreement":null},{"id":"W4308866272","doi":"10.3390/v14112478","title":"Development of Antimicrobial Paper Coatings Containing Bacteriophages and Silver Nanoparticles for Control of Foodborne Pathogens","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Cegep de Trois-Rivieres; Kruger (Canada); Université du Québec à Trois-Rivières","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Antimicrobial; Coating; Silver nanoparticle; Listeria monocytogenes; Infectivity; Chemistry; Matrix (chemical analysis); Microbiology; Nanoparticle; Materials science; Bacteria; Nanotechnology; Chromatography; Biology; Virus; Virology","score_opus":0.014994837165953826,"score_gpt":0.21263235905589145,"score_spread":0.19763752188993763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308866272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988374,0.00012661456,0.00074587396,0.0000114402155,0.000052813477,0.00009470366,0.0000893952,0.0000276491,0.000014079127],"genre_scores_gemma":[0.9982169,0.000007605709,0.001652749,0.00007872335,0.000012619193,0.000014602365,0.0000018904675,0.000011385912,0.0000034935565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995602,0.000010598195,0.00020212418,0.0000727414,0.00005598024,0.000098356424],"domain_scores_gemma":[0.9998194,0.000058148238,0.000039346338,0.000042186173,0.000020096508,0.000020795294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097250115,0.000061720544,0.00014759696,0.000031323198,0.00006575675,0.0000061929945,0.000029761499,0.000018745754,0.000031989774],"category_scores_gemma":[0.00001800404,0.000059792626,0.000028032227,0.000050149534,0.000025412946,0.00004129955,0.000019690833,0.00003477879,3.0665072e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004989532,0.000016481214,0.00031146142,0.000063871834,0.000030211595,3.8173292e-7,0.0002816465,0.00043363997,0.99458855,0.000077875535,0.000019800116,0.0041261916],"study_design_scores_gemma":[0.0005975652,0.000089179484,0.0028442014,0.000015079734,0.000025103647,0.0000016283436,0.00019736073,0.0018733188,0.99074394,0.00001040814,0.0035204994,0.000081748396],"about_ca_topic_score_codex":0.000004767095,"about_ca_topic_score_gemma":0.0000057085076,"teacher_disagreement_score":0.0040444434,"about_ca_system_score_codex":0.000011180479,"about_ca_system_score_gemma":0.000008708436,"threshold_uncertainty_score":0.24382725},"labels":[],"label_agreement":null},{"id":"W4309009340","doi":"10.3390/v14112493","title":"Global Real-World Evidence of Sofosbuvir/Velpatasvir as a Highly Effective Treatment and Elimination Tool in People with Hepatitis C Infection Experiencing Mental Health Disorders","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"William Osler Health System; University of British Columbia","funders":"","keywords":"Sofosbuvir; Medicine; Internal medicine; Ribavirin; Hepatitis C; Regimen; Population; Mental health; Hepatitis C virus; Psychiatry; Immunology; Virus","score_opus":0.02496654033305803,"score_gpt":0.36622727100493097,"score_spread":0.34126073067187296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309009340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965858,0.00059621065,0.00004000797,0.0005937745,0.000060560633,0.0016753736,0.00007969622,0.000042171338,0.00032642577],"genre_scores_gemma":[0.9934848,0.0052690483,0.0001191823,0.00019952384,0.000018814539,0.0008226984,0.00003430825,0.000017450238,0.000034173678],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982796,0.00033072944,0.00028657287,0.0003424489,0.00048816545,0.00027251762],"domain_scores_gemma":[0.99937826,0.00017881027,0.00012684587,0.00019264406,0.00004122883,0.00008219368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033167182,0.00015875844,0.0003375445,0.00024164253,0.00021335369,0.000017809287,0.000047566144,0.000024361572,0.0001108867],"category_scores_gemma":[0.0001311386,0.00014157336,0.000035952497,0.0008703153,0.0000827461,0.00030890608,0.000094097835,0.00011168673,0.0000038404823],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089439447,0.00033752644,0.9029347,0.000107232976,0.000039274535,0.0000111234785,0.0053712986,0.000056824232,0.0008193829,0.00018628073,0.000073947325,0.08916802],"study_design_scores_gemma":[0.0020293002,0.008300483,0.98423755,0.0002949346,0.000021263368,0.000018315055,0.00083957735,0.00041577913,0.0023885474,0.00003483737,0.0012801097,0.00013931183],"about_ca_topic_score_codex":0.28302604,"about_ca_topic_score_gemma":0.23511505,"teacher_disagreement_score":0.08902871,"about_ca_system_score_codex":0.0024658137,"about_ca_system_score_gemma":0.00044314488,"threshold_uncertainty_score":0.7788421},"labels":[],"label_agreement":null},{"id":"W4309009387","doi":"10.3390/v14112494","title":"G-Quadruplex DNA and Other Non-Canonical B-Form DNA Motifs Influence Productive and Latent HIV-1 Integration and Reactivation Potential","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Buck Institute for Research on Aging","keywords":"DNA; Human immunodeficiency virus (HIV); G-quadruplex; Non canonical; Genetics; Biology; Computational biology; Virology; Cell biology","score_opus":0.018505721530353327,"score_gpt":0.26437839632210347,"score_spread":0.24587267479175015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309009387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99824536,0.00066430966,0.000038744187,0.00035625312,0.00006851368,0.0003305495,0.00015150558,0.000022599375,0.00012217365],"genre_scores_gemma":[0.99912643,0.00009099142,0.00003451473,0.00014194915,0.000020200192,0.00008534045,0.000073586285,0.000009446735,0.00041751194],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925166,0.00010654914,0.00012642962,0.00028283556,0.000048894064,0.00018363034],"domain_scores_gemma":[0.9997247,0.00004989275,0.00005266401,0.000113511465,0.00003069667,0.000028532177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014449233,0.00011012072,0.00012683509,0.00007977089,0.00032975397,0.000026376742,0.000047491354,0.000055057277,0.00014921174],"category_scores_gemma":[0.000052568193,0.00008806529,0.000015181926,0.00006958883,0.00021705173,0.00017143348,0.00013393,0.00019111104,0.000040790816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004685039,0.00017190608,0.027835103,0.0000120539125,0.00015041672,0.000008318527,0.0012856339,0.0000073871706,0.9530755,0.0003003043,0.0005535695,0.016131248],"study_design_scores_gemma":[0.0039166342,0.0015683789,0.5954466,0.000036437777,0.00011438314,0.00031167158,0.0014005544,0.00006638321,0.35625115,0.0006328641,0.039859105,0.00039583616],"about_ca_topic_score_codex":0.00037712065,"about_ca_topic_score_gemma":0.000036109755,"teacher_disagreement_score":0.5968244,"about_ca_system_score_codex":0.000050180082,"about_ca_system_score_gemma":0.000046821242,"threshold_uncertainty_score":0.3591198},"labels":[],"label_agreement":null},{"id":"W4309458839","doi":"10.3390/v14112553","title":"IFITM3 Inhibits SARS-CoV-2 Infection and Is Associated with COVID-19 Susceptibility","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; National Natural Science Foundation of China","keywords":"Asymptomatic; Medicine; Genotype; Cohort; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Immunology; Coronavirus; Pneumonia; Population; Coronavirus disease 2019 (COVID-19); Gene; Biology; Internal medicine; Genetics; Disease; Environmental health","score_opus":0.1457990999831278,"score_gpt":0.4516159560237639,"score_spread":0.30581685604063613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309458839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99240345,0.000116750336,0.00007092567,0.0063098134,0.000056352343,0.0005465006,0.00010149872,0.00017482457,0.00021988363],"genre_scores_gemma":[0.9620904,0.00017767774,0.000019513023,0.037298463,0.00004748922,0.00009097021,0.000013947374,0.000019303028,0.00024223456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808604,0.00025057065,0.00026379313,0.0004597667,0.0006390404,0.00030080214],"domain_scores_gemma":[0.99609184,0.0031764985,0.00010449702,0.00030884796,0.0001310732,0.0001872405],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0011235029,0.00015128085,0.0003545092,0.00014006237,0.00045596928,0.00002440257,0.00006278693,0.0000569657,0.0003144929],"category_scores_gemma":[0.033026174,0.00012120361,0.000064708984,0.0005565246,0.00031461517,0.00009319153,0.00037759732,0.00045968193,0.000018884786],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010135686,0.00065684813,0.94459844,0.00028020336,0.00028078293,0.00008378936,0.0009994238,0.000024480201,0.031791493,0.000058801255,0.018778607,0.0014335486],"study_design_scores_gemma":[0.008244629,0.005714901,0.543914,0.00012253424,0.00031575005,0.000016623531,0.00031137408,0.00034588212,0.035301358,0.0011763461,0.40399268,0.0005439128],"about_ca_topic_score_codex":0.0029018004,"about_ca_topic_score_gemma":0.0010557736,"teacher_disagreement_score":0.40068445,"about_ca_system_score_codex":0.0006031041,"about_ca_system_score_gemma":0.00053928536,"threshold_uncertainty_score":0.97511905},"labels":[],"label_agreement":null},{"id":"W4309720030","doi":"10.3390/v14112579","title":"Impact of Hepatitis B Virus Infection, Non-alcoholic Fatty Liver Disease, and Hepatitis C Virus Co-infection on Liver-Related Death among People Tested for Hepatitis B Virus in British Columbia: Results from a Large Longitudinal Population-Based Cohort Study","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre for Advancing Health Outcomes; St. Paul's Hospital; BC Centre for Disease Control; University of British Columbia","funders":"BC Cancer Agency; Canadian Institutes of Health Research; British Columbia Centre for Disease Control; Ministry of Health, British Columbia","keywords":"Coinfection; Medicine; Hepatitis B virus; Internal medicine; Hepatitis C virus; Fatty liver; Liver disease; Hepatitis B; Gastroenterology; Hepatitis C; Immunology; Mortality rate; Virology; Virus; Disease","score_opus":0.01963999813954452,"score_gpt":0.28998636722407795,"score_spread":0.2703463690845334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309720030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9690357,0.00038552904,0.000027304106,0.000009326448,0.0002209041,0.0052816444,0.024871234,0.00015171123,0.000016631551],"genre_scores_gemma":[0.9886359,0.0037444213,0.000025687305,0.0001352347,0.000087826265,0.002367391,0.004886017,0.0000923295,0.000025207504],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99630046,0.0003862204,0.000975642,0.001065277,0.00075401267,0.00051841256],"domain_scores_gemma":[0.9975097,0.0007096518,0.0005349371,0.0005592854,0.0002739746,0.00041243792],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036482402,0.00042494576,0.0009727016,0.00039112478,0.0006752577,0.0001906142,0.00010388847,0.00014482428,0.00083967263],"category_scores_gemma":[0.00044173226,0.00055830454,0.0003911307,0.0007562779,0.000075312746,0.00036782614,0.000104966704,0.00031424136,0.000013590597],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011161253,0.010289148,0.9842905,0.000087184344,0.0011379593,0.0005711506,0.0003199967,0.0006854661,0.00006558156,0.0000016686403,0.0008846004,0.0005506344],"study_design_scores_gemma":[0.0106942225,0.0040185493,0.97852784,0.0003341595,0.0015120667,0.000010224959,0.000009763373,0.004237336,0.00013377998,0.000023828736,0.000022020335,0.00047621204],"about_ca_topic_score_codex":0.9873627,"about_ca_topic_score_gemma":0.95065767,"teacher_disagreement_score":0.03670501,"about_ca_system_score_codex":0.0011939507,"about_ca_system_score_gemma":0.0003067164,"threshold_uncertainty_score":0.99968684},"labels":[],"label_agreement":null},{"id":"W4309839637","doi":"10.3390/v14122602","title":"Chitinase-3-like Protein 1 Is Associated with Poor Virologic Control and Immune Activation in Children Living with HIV","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto; Children's Hospital of Eastern Ontario; Women and Children’s Health Research Institute; University of Ottawa; Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Interquartile range; Immunology; Medicine; CD8; Immune system; Viral load; Immune dysregulation; Cart; Internal medicine; Cohort; Virus","score_opus":0.008253476812008958,"score_gpt":0.2129312191368154,"score_spread":0.20467774232480643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309839637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975971,0.00008270984,0.000024756282,0.0010364106,0.000010381875,0.0009961802,0.000042553336,0.00010046349,0.0001094343],"genre_scores_gemma":[0.99754304,0.0000043612167,0.000029716712,0.0018034244,0.000014562391,0.0004159425,0.000019146495,0.000026407477,0.00014341559],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989846,0.00011566569,0.00016599828,0.00027678054,0.0002499693,0.0002070305],"domain_scores_gemma":[0.9995615,0.00007849498,0.00013471278,0.00014225989,0.00002256535,0.000060490394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001267879,0.00016653298,0.00027765802,0.00015463776,0.00019615311,0.00001933184,0.000041595074,0.000039137965,0.000106465784],"category_scores_gemma":[0.000061549035,0.00012134149,0.0000251849,0.0002705132,0.000049011247,0.00008666925,0.00003582247,0.00024347322,0.000004622229],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009326805,0.00081645354,0.74273854,0.000010067845,0.0003462123,0.000059707214,0.00028297573,0.000054405245,0.2540513,0.00002820772,0.000017231414,0.0006622243],"study_design_scores_gemma":[0.0052320976,0.0019263282,0.98553336,0.00013307697,0.000087990076,0.0001579908,0.000122016754,0.0001471238,0.006439486,0.0000075929756,0.00006813549,0.00014482833],"about_ca_topic_score_codex":0.0002668628,"about_ca_topic_score_gemma":0.000032933516,"teacher_disagreement_score":0.2476118,"about_ca_system_score_codex":0.00016661722,"about_ca_system_score_gemma":0.00005506067,"threshold_uncertainty_score":0.4948162},"labels":[],"label_agreement":null},{"id":"W4310215156","doi":"10.3390/v14122629","title":"Long-COVID Symptoms in Individuals Infected with Different SARS-CoV-2 Variants of Concern: A Systematic Review of the Literature","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":183,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Novo Nordisk Fonden; Danmarks Grundforskningsfond; National Research Foundation","keywords":"Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); CINAHL; Medicine; 2019-20 coronavirus outbreak; Web of science; MEDLINE; Preprint; Meta-analysis; Virology; Internal medicine; Biology; Disease; Outbreak; World Wide Web; Psychological intervention; Psychiatry","score_opus":0.049937945213323,"score_gpt":0.36112492653756767,"score_spread":0.31118698132424466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310215156","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022980783,0.98592466,0.0000033245256,0.00006324098,0.00018134636,0.010973384,0.0004289961,0.000052186104,0.00007478141],"genre_scores_gemma":[0.00090707873,0.9947198,0.000011257092,0.0028667855,0.0000514398,0.0011510731,0.00015659776,0.00010682856,0.000029162915],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9938009,0.0021308973,0.0019764218,0.0005659179,0.0011745832,0.00035132442],"domain_scores_gemma":[0.9928218,0.0026975956,0.0024397515,0.0018101175,0.00013187577,0.00009885404],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009553317,0.0007790175,0.0066547557,0.0005209155,0.000049339997,0.00003480159,0.0008746943,0.00031399465,0.0001288418],"category_scores_gemma":[0.0042288876,0.00038161204,0.0007711562,0.0019184267,0.00019118066,0.000117096955,0.0004090393,0.00093013,0.0000073844167],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022939748,0.000273633,0.0026854775,0.99380976,0.0011630425,0.00010846377,0.00022869188,1.2463906e-7,0.000013395826,0.00007276133,0.00017939115,0.0014423291],"study_design_scores_gemma":[0.0010410626,0.00044675995,0.0006739157,0.9629511,0.008246988,0.00028738094,0.0000040677432,3.560244e-7,0.0000685525,0.0000076003544,0.025932018,0.00034018888],"about_ca_topic_score_codex":0.000066107146,"about_ca_topic_score_gemma":0.000022783757,"teacher_disagreement_score":0.030858641,"about_ca_system_score_codex":0.00039197132,"about_ca_system_score_gemma":0.0012187825,"threshold_uncertainty_score":0.99986356},"labels":[],"label_agreement":null},{"id":"W4310215204","doi":"10.3390/v14122638","title":"The μ2 and λ1 Proteins of Mammalian Reovirus Modulate Early Events Leading to Induction of the Interferon Signaling Network","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Interferon; Biology; Virology; RNA; Gene; STAT1; Transfection; Viral protein; Virus; Genetics","score_opus":0.047656511537661435,"score_gpt":0.31578209184898065,"score_spread":0.2681255803113192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310215204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792725,0.00024526534,0.00010658717,0.0010384811,0.00016466256,0.00046438733,0.00001187067,0.000008050959,0.000033431457],"genre_scores_gemma":[0.9990766,0.00003716956,0.00017093374,0.00034052806,0.00010117523,0.000054059296,0.0000011165665,0.000011124491,0.00020728013],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880743,0.00032903368,0.00026923962,0.00013736359,0.00020417928,0.0002527776],"domain_scores_gemma":[0.99956924,0.000034423145,0.00009732979,0.00019918071,0.00003619143,0.00006362974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006849397,0.00007043274,0.00019445048,0.000047205416,0.00021315871,0.0000055670967,0.000142383,0.000023617566,0.000028468101],"category_scores_gemma":[0.00024389199,0.000043698652,0.000052246953,0.00017872547,0.00009116124,0.00004340012,0.00026714077,0.00023800897,0.0000020755488],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024745285,0.00006997982,0.29497027,0.00007774017,0.00011194397,0.0000059690697,0.0005825663,0.0027022355,0.68379915,0.00018569744,0.0012661905,0.013753733],"study_design_scores_gemma":[0.0027689517,0.014056683,0.8358668,0.0011482618,0.00012159582,0.00015132781,0.0012963506,0.00069200573,0.12138926,0.0021820117,0.020021113,0.00030561045],"about_ca_topic_score_codex":0.000750112,"about_ca_topic_score_gemma":0.0000939958,"teacher_disagreement_score":0.5624099,"about_ca_system_score_codex":0.00004240555,"about_ca_system_score_gemma":0.000024423734,"threshold_uncertainty_score":0.17819794},"labels":[],"label_agreement":null},{"id":"W4310373532","doi":"10.3390/v14122670","title":"Utility of Alternative Promoters for Foreign Gene Expression Using the Baculovirus Expression Vector System","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Promoter; Biology; Gene; Gene expression; Computational biology; Genetics; Recombinant DNA; Regulation of gene expression; Transcriptome","score_opus":0.03929384916197004,"score_gpt":0.2993506442633872,"score_spread":0.26005679510141716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310373532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847182,0.00084962294,0.012481857,0.000008235702,0.00045207192,0.00069110404,0.00056107785,0.000022099019,0.00021574185],"genre_scores_gemma":[0.99836344,0.000016632963,0.0008721153,0.00014172883,0.00023922727,0.000244331,0.000056344306,0.000028822522,0.00003735346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987135,0.00022038582,0.00026629085,0.0003646835,0.00022503182,0.00021010579],"domain_scores_gemma":[0.9991228,0.000036287165,0.00024839866,0.00044676132,0.00008510527,0.000060672806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021080798,0.00016246538,0.00016652222,0.000038287206,0.0005101968,0.00001897224,0.00030027534,0.00005960908,0.00006985337],"category_scores_gemma":[0.000057595826,0.00011560464,0.00017900199,0.00008123366,0.0000750938,0.000008991259,0.00037524986,0.000079086974,6.7329603e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048250065,0.00010390389,0.0012560851,0.000066860965,0.000036836864,0.0000012139841,0.00007997675,0.0012242489,0.9936961,0.00006733523,0.0028080256,0.00017693403],"study_design_scores_gemma":[0.0005110154,0.00033935008,0.00017474225,0.000042015912,0.00002687473,0.00000969325,0.0005476287,0.0013931899,0.99087185,0.000086217544,0.005853268,0.00014413426],"about_ca_topic_score_codex":0.00008465576,"about_ca_topic_score_gemma":0.0000020563007,"teacher_disagreement_score":0.013645254,"about_ca_system_score_codex":0.000023943287,"about_ca_system_score_gemma":0.00007317396,"threshold_uncertainty_score":0.47142205},"labels":[],"label_agreement":null},{"id":"W4311001945","doi":"10.3390/v14122668","title":"Clinical Outcomes and Quantitative HBV Surface Antigen Levels in Diverse Chronic Hepatitis B Patients in Canada: A Retrospective Real-World Study of CHB in Canada (REVEAL-CANADA)","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Ottawa; Public Health Agency of Canada; University of Toronto; Western University; McMaster University; University of Manitoba; Alberta Health; Dalhousie University; University of British Columbia; Toronto Liver Centre; University of Saskatchewan; Providence Health Care; University of Alberta; University of Calgary","funders":"","keywords":"HBsAg; Medicine; HBeAg; Internal medicine; Hepatitis B virus; Hepatitis B; Gastroenterology; Retrospective cohort study; Immunology; Virus","score_opus":0.0665562580193923,"score_gpt":0.33794417290394074,"score_spread":0.27138791488454844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311001945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967447,0.00028413223,1.4938867e-7,0.00014789066,0.00036837507,0.001178097,0.0011086597,0.000006554198,0.00016142828],"genre_scores_gemma":[0.99883986,0.00053704926,0.000031633386,0.00043860773,0.0000108808945,0.000055929602,0.000012053625,0.00002773962,0.00004626166],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996356,0.00051709334,0.0010860501,0.0005299513,0.0010316985,0.00047921136],"domain_scores_gemma":[0.9984728,0.0006650698,0.00031026383,0.00029699632,0.00012360369,0.00013125232],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004453726,0.00026792384,0.0012067312,0.0002163527,0.00011408128,0.0000041529674,0.00016579952,0.00002762861,0.00010119737],"category_scores_gemma":[0.0005993553,0.00027202157,0.000032480904,0.00086772325,0.00007668195,0.00009394439,0.00036242744,0.0005251678,4.3597095e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00012714158,0.000390647,0.99555355,0.00003810482,0.0001461458,0.0006440322,0.0011905311,0.00022366153,0.000008656069,0.000026449823,0.0014176699,0.00023343164],"study_design_scores_gemma":[0.0037616652,0.00068097713,0.9905848,0.000092502574,0.000029252273,5.4644335e-7,0.0043112985,0.00008976727,0.00002126895,0.000008915186,0.00018385642,0.00023518575],"about_ca_topic_score_codex":0.9999994,"about_ca_topic_score_gemma":1,"teacher_disagreement_score":0.0049687643,"about_ca_system_score_codex":0.013941289,"about_ca_system_score_gemma":0.015992297,"threshold_uncertainty_score":0.9999732},"labels":[],"label_agreement":null},{"id":"W4311002527","doi":"10.3390/v14122667","title":"Prevention of Herpes Zoster: A Focus on the Effectiveness and Safety of Herpes Zoster Vaccines","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Queen's University","funders":"","keywords":"Shingles; Medicine; Chickenpox; Varicella zoster virus; Varicella vaccine; Adverse effect; Clinical trial; Virology; Attenuated vaccine; Immunology; Immunization; Virus; Immune system; Internal medicine","score_opus":0.06986021612313853,"score_gpt":0.36267351432492345,"score_spread":0.2928132982017849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311002527","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010958151,0.98413485,0.000011102415,0.000023785777,0.00022189265,0.0022466723,0.00017307368,0.000034879118,0.0021956058],"genre_scores_gemma":[0.010129937,0.9890627,0.000020140542,0.000041946965,0.000070623144,0.00042355253,0.00002533632,0.00005704839,0.00016870271],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978849,0.0007761686,0.0005938131,0.00033570704,0.0002449039,0.00016445151],"domain_scores_gemma":[0.9974127,0.0015713999,0.00042747648,0.00048944255,0.00004787104,0.000051115585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005470448,0.00035838858,0.0014834313,0.00022280672,0.00012089278,0.0000122465535,0.00010520943,0.00016102426,0.00061245484],"category_scores_gemma":[0.00014872312,0.00020421881,0.0004600576,0.0003456035,0.00007633147,0.00006050632,0.000118119904,0.00017197426,0.000016043841],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028914204,0.0005878582,0.0002952746,0.0073639792,0.0010239452,0.000009825785,0.00003420035,2.5320807e-7,0.0000023869086,0.000273125,0.000048994178,0.990071],"study_design_scores_gemma":[0.0010371074,0.0008344793,0.0011690422,0.012027707,0.0019996732,0.000045546356,0.000022095272,3.0694153e-7,0.00028088546,0.00016003476,0.98226464,0.0001584601],"about_ca_topic_score_codex":0.00021741758,"about_ca_topic_score_gemma":0.000027544655,"teacher_disagreement_score":0.98991257,"about_ca_system_score_codex":0.000093023285,"about_ca_system_score_gemma":0.00014187263,"threshold_uncertainty_score":0.8327801},"labels":[],"label_agreement":null},{"id":"W4311510843","doi":"10.3390/v14122792","title":"Special Issue “Human Betaretrovirus and Related Diseases”","year":2022,"lang":"en","type":"editorial","venue":"Viruses","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Mouse mammary tumor virus; Human breast; Cancer; Biology; Virology; Breast cancer; Virus; Medicine; Genetics","score_opus":0.010631800296751018,"score_gpt":0.28476747938517954,"score_spread":0.2741356790884285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311510843","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0046172505,0.00538717,7.522662e-8,0.0002067146,0.9436903,0.00049710396,0.0021943576,0.00023688258,0.04317014],"genre_scores_gemma":[0.00059953256,0.00216116,0.0000041690887,0.00055548723,0.98079634,0.00006026497,0.0020052374,0.00012767549,0.013690138],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99745655,0.00008946019,0.0004224401,0.0006337265,0.0009902633,0.00040758718],"domain_scores_gemma":[0.99881846,0.00016607897,0.00026714132,0.000401891,0.000084148,0.00026229973],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012990394,0.00040504808,0.0007964482,0.00023241459,0.00036282802,0.00006726479,0.00017576547,0.00065567263,0.018758073],"category_scores_gemma":[0.0005345947,0.00039984979,0.00021661373,0.0002649347,0.0001603576,0.00010687547,0.00017243695,0.0012087782,0.00014617768],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031661362,0.00013650596,0.0022329637,0.00012918354,0.0002986518,0.0001925978,0.00014179152,0.0000011148601,0.00003587446,0.000028045115,0.99468404,0.0018026447],"study_design_scores_gemma":[0.0034189967,0.0007019869,0.0013285703,0.000088642664,0.0008985501,0.0000022071179,0.0001772681,7.339774e-7,0.00000871892,0.00018001041,0.9927932,0.00040113207],"about_ca_topic_score_codex":0.0009255379,"about_ca_topic_score_gemma":0.00008011313,"teacher_disagreement_score":0.03710603,"about_ca_system_score_codex":0.0004266449,"about_ca_system_score_gemma":0.0004991813,"threshold_uncertainty_score":0.9998453},"labels":[],"label_agreement":null},{"id":"W4311521053","doi":"10.3390/v14122710","title":"U5 snRNP Core Proteins Are Key Components of the Defense Response against Viral Infection through Their Roles in Programmed Cell Death and Interferon Induction","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"snRNP; Spliceosome; Biology; RNA splicing; Necroptosis; Ribonucleoprotein; Small nuclear ribonucleoprotein; Cell biology; Interferon; Viral replication; RNA; Programmed cell death; Virology; Genetics; Virus; Apoptosis; Gene","score_opus":0.04722925033566178,"score_gpt":0.28555616632488817,"score_spread":0.2383269159892264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311521053","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99903125,0.0002980882,0.000022335062,0.00006484529,0.000054716675,0.00045405372,0.000028694483,0.000008068157,0.000037955106],"genre_scores_gemma":[0.99947345,0.00010997456,0.000046484824,0.00013358993,0.00002608932,0.00010382311,0.00002265181,0.000012887769,0.00007103756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99905366,0.00030998848,0.00014682807,0.00019531646,0.00012792063,0.00016629041],"domain_scores_gemma":[0.9996335,0.00001530703,0.00009878434,0.00019569631,0.00002984595,0.000026847852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002773718,0.000097609554,0.000100502286,0.000049463542,0.00014672277,0.000016031012,0.00010997162,0.000055048273,0.0000027914618],"category_scores_gemma":[0.00007421545,0.00007257669,0.000043315213,0.000110896166,0.000071883136,0.000008908409,0.00026658413,0.00017503482,4.1390354e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015341054,0.00013906811,0.07577901,0.000018326264,0.000012165951,0.0000016838158,0.0002572396,0.00010390604,0.9211379,0.000007878891,0.000036952573,0.0009717143],"study_design_scores_gemma":[0.0007757011,0.0008719093,0.13502528,0.00003974128,0.0000048137413,0.000008205656,0.00059907726,0.00012518803,0.85785913,0.000060694394,0.0045155142,0.00011476999],"about_ca_topic_score_codex":0.00048024286,"about_ca_topic_score_gemma":0.00033209374,"teacher_disagreement_score":0.06327883,"about_ca_system_score_codex":0.000036655118,"about_ca_system_score_gemma":0.000041715284,"threshold_uncertainty_score":0.29595914},"labels":[],"label_agreement":null},{"id":"W4312125493","doi":"10.3390/v14122761","title":"Clinical Application of Detecting COVID-19 Risks: A Natural Language Processing Approach","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Topic Modeling","field":"Computer Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Toronto Metropolitan University","funders":"","keywords":"Novelty; Computer science; Machine learning; Artificial intelligence; Artificial neural network; Pipeline (software); Pandemic; Transformer; F1 score; Task (project management); Named-entity recognition; Coronavirus disease 2019 (COVID-19); Natural language processing; Infectious disease (medical specialty); Disease; Medicine; Psychology; Engineering","score_opus":0.11799924662285974,"score_gpt":0.404890190535899,"score_spread":0.28689094391303926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312125493","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19405206,0.0010006623,0.8043229,0.00006534541,0.000105137224,0.00013566182,0.0000019953939,0.00015673255,0.00015950759],"genre_scores_gemma":[0.92496836,0.0000017361829,0.073883586,0.0010096135,0.00006931602,0.000049949856,0.0000013304709,0.000005938569,0.000010178642],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9988595,0.00014345626,0.00029158275,0.00032582253,0.00024653916,0.0001330937],"domain_scores_gemma":[0.99922,0.00014012541,0.0001955925,0.00036674805,0.000021850092,0.000055673685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007959539,0.0000666495,0.00013277793,0.00007079056,0.00021397963,0.00003535373,0.0006299786,0.000024870438,0.000004216842],"category_scores_gemma":[0.0002245839,0.00006478341,0.000046515048,0.00032100824,0.000028798053,0.00018607496,0.00042536244,0.00023240906,0.000002131417],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020011277,0.0001597505,0.016603932,0.00013810088,0.000014907566,0.00000651959,0.0053633708,0.014807503,0.0050646528,0.0026111281,0.000053618038,0.9551565],"study_design_scores_gemma":[0.00024343851,0.000030340203,0.0006054165,0.0000035439482,0.0000055358764,0.000018015262,0.0007912096,0.99518925,0.000690108,0.0002784664,0.0020338437,0.00011081521],"about_ca_topic_score_codex":0.0003325987,"about_ca_topic_score_gemma":0.000007143059,"teacher_disagreement_score":0.9803818,"about_ca_system_score_codex":0.000053879186,"about_ca_system_score_gemma":0.00012842056,"threshold_uncertainty_score":0.26417908},"labels":[],"label_agreement":null},{"id":"W4312211193","doi":"10.3390/v14122805","title":"Back to Where It Was First Described: Vectors of Sylvatic Yellow Fever Transmission in the 2017 Outbreak in Espírito Santo, Brazil","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Vale Canada Limited","keywords":"Outbreak; Yellow fever; Transmission (telecommunications); Biology; Veterinary medicine; Abundance (ecology); Geography; Virology; Ecology; Virus; Medicine","score_opus":0.028713805556254773,"score_gpt":0.29961915951378704,"score_spread":0.27090535395753224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312211193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874153,0.0030745463,0.0000332249,0.0060022734,0.00014567183,0.0009065823,0.00006503515,0.000014879492,0.002342498],"genre_scores_gemma":[0.99348456,0.0001617911,0.00005127642,0.0054825824,0.00006241397,0.000116678755,0.0000105204135,0.000023168577,0.00060698704],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985831,0.00013268583,0.00035994255,0.00026567394,0.000386194,0.0002724479],"domain_scores_gemma":[0.99925137,0.00015641647,0.00006286252,0.0003963018,0.000024977933,0.000108085624],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026434864,0.00015737317,0.00034087026,0.0001578109,0.000083839295,0.000017568866,0.00027329876,0.000045206532,0.0030416402],"category_scores_gemma":[0.000065293076,0.00011423968,0.00011762529,0.00041334901,0.000035537585,0.00007431959,0.000058817648,0.00020144155,0.000062676445],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059588226,0.004672049,0.51349777,0.0018137557,0.00024596034,0.00079206337,0.024888707,0.0024065797,0.051371213,0.0005929519,0.3592731,0.034486983],"study_design_scores_gemma":[0.0065816413,0.0010884904,0.28051978,0.001043575,0.0002525701,0.000029973402,0.007026243,0.0011436688,0.0018954037,0.00013968807,0.6998174,0.00046157374],"about_ca_topic_score_codex":0.0021524234,"about_ca_topic_score_gemma":0.0015964123,"teacher_disagreement_score":0.34054428,"about_ca_system_score_codex":0.00008129832,"about_ca_system_score_gemma":0.00011089852,"threshold_uncertainty_score":0.99786973},"labels":[],"label_agreement":null},{"id":"W4312226605","doi":"10.3390/v15010083","title":"Genomic Characterization of the Historical Smallpox Vaccine Strain Wyeth Isolated from a 1971 Seed Vial","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sanofi Pasteur; Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; University of Windsor; Sanofi; Bill and Melinda Gates Foundation","keywords":"Vial; Strain (injury); Virology; Smallpox; Biology; Medicine; Vaccination; Chemistry; Chromatography","score_opus":0.025369957349666558,"score_gpt":0.2443884432608983,"score_spread":0.21901848591123174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312226605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996663,0.0006261298,0.00009428042,0.00031633058,0.00078531576,0.00019776374,0.0011684144,0.00004023516,0.00010855616],"genre_scores_gemma":[0.9976998,0.00003148424,0.000006841737,0.0004960687,0.000057485937,0.000024969444,0.0002981067,0.000014679889,0.0013705482],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99886334,0.00039341516,0.00024410585,0.00019593931,0.0000595809,0.00024362582],"domain_scores_gemma":[0.9994785,0.000082841216,0.00012875356,0.00026205817,0.000027677555,0.000020176281],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014727167,0.00010692044,0.00020029939,0.00007429046,0.00026343847,0.0000067772394,0.000372658,0.00008871357,0.0022798718],"category_scores_gemma":[0.000055429755,0.00008162341,0.00008127484,0.00017803571,0.000043482443,0.00004926669,0.00029478737,0.00035715918,0.000104659615],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005669094,0.00011973629,0.007950056,0.0000028978666,0.000096374235,0.000002449187,0.00033960398,0.0000031576135,0.98817754,0.000062415216,0.0006767036,0.0020021575],"study_design_scores_gemma":[0.0018745513,0.0003550346,0.3912585,0.000007902639,0.00004451715,0.000014658102,0.00007693427,0.00002988576,0.25324464,0.00010956962,0.3527974,0.00018640432],"about_ca_topic_score_codex":0.0015407066,"about_ca_topic_score_gemma":0.0000662076,"teacher_disagreement_score":0.7349329,"about_ca_system_score_codex":0.00018901529,"about_ca_system_score_gemma":0.00011756081,"threshold_uncertainty_score":0.9986322},"labels":[],"label_agreement":null},{"id":"W4313225160","doi":"10.3390/v15010085","title":"Generation and Characterization of a SARS-CoV-2-Susceptible Mouse Model Using Adeno-Associated Virus (AAV6.2FF)-Mediated Respiratory Delivery of the Human ACE2 Gene","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Canadian Food Inspection Agency; University of Manitoba; Public Health Agency of Canada","funders":"University of Toronto; Public Health Agency; Public Health Agency of Canada; Sunnybrook Research Institute; Canadian Food Inspection Agency","keywords":"Immune system; Immunology; Virology; Virus; Nasal administration; Biology; Antibody; Medicine; Pandemic; Lung; Disease; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Pathology; Internal medicine","score_opus":0.16173531879460237,"score_gpt":0.36157388916339833,"score_spread":0.19983857036879596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313225160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987477,0.00023358784,0.000069237976,0.000028931241,0.00006459151,0.00047984684,0.00030600245,0.000043469598,0.000026625501],"genre_scores_gemma":[0.9866226,0.000010440738,0.000047234345,0.013120907,0.00006937737,0.000036821766,0.000033442808,0.000042808108,0.000016374419],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819916,0.00023653556,0.00043915887,0.0002799719,0.00061260985,0.00023255998],"domain_scores_gemma":[0.99905103,0.0000326442,0.00031538296,0.00035390785,0.00022531723,0.000021733456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041559568,0.00015983335,0.00032074362,0.00027155975,0.00030211647,0.000019707302,0.0001748682,0.00010621438,0.0000123297705],"category_scores_gemma":[0.000119453114,0.0001399429,0.0000841729,0.0005253638,0.00014274879,0.00016574605,0.00024085454,0.00024359665,0.0000020554976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014678472,0.00025618772,0.020316986,0.000049555292,0.00007726256,0.000003804064,0.0005287877,0.00008476885,0.9783283,0.000017011049,0.00010392423,0.000086666674],"study_design_scores_gemma":[0.0011571137,0.0002561375,0.002700667,0.00002701905,0.000080015125,0.0000027762037,0.000058530124,0.023739638,0.97100776,0.000011686708,0.00083673204,0.00012190423],"about_ca_topic_score_codex":0.00066875573,"about_ca_topic_score_gemma":0.00012707479,"teacher_disagreement_score":0.023654869,"about_ca_system_score_codex":0.0002066674,"about_ca_system_score_gemma":0.0003810915,"threshold_uncertainty_score":0.5706706},"labels":[],"label_agreement":null},{"id":"W4313237994","doi":"10.3390/v15010091","title":"Hepatitis B and C in Pregnancy and Children: A Canadian Perspective","year":2022,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"York University; University Health Network","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Psychological intervention; Public health; Pregnancy; Hepatitis C; Prenatal care; Environmental health; Hepatitis B; Health care; Family medicine; Intensive care medicine; Nursing; Immunology; Economic growth; Population","score_opus":0.06178127435026694,"score_gpt":0.3383478062820887,"score_spread":0.2765665319318218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313237994","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006198231,0.9946214,5.88805e-8,0.000059081827,0.00007367606,0.0011582698,0.00043816672,0.000028309241,0.0030011921],"genre_scores_gemma":[0.00026966206,0.99878293,0.00003942092,0.00032063565,0.00006894978,0.00032551977,0.000031422245,0.000054336768,0.000107136926],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99868286,0.00010962295,0.0002879254,0.00046061294,0.00014927302,0.00030968245],"domain_scores_gemma":[0.99934256,0.00012564722,0.00008467093,0.00021616783,0.000022637863,0.0002083171],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007974047,0.00030837517,0.0012500149,0.00052219245,0.00014175742,0.00002306035,0.00006559775,0.00012672436,0.00031571055],"category_scores_gemma":[0.00031302508,0.000274544,0.00008019979,0.00030917957,0.00012030668,0.000059665923,0.00013132354,0.0004273067,0.000017622597],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004634158,0.000039750626,0.14914466,0.0029291587,0.00033280445,0.00047356787,0.0009338656,8.215875e-9,4.7311804e-8,0.00039113907,0.0007081592,0.84504217],"study_design_scores_gemma":[0.0002617312,0.0001224095,0.028146027,0.013497062,0.00045031283,0.00022741426,0.00005010765,2.3408761e-7,1.327812e-7,0.000042167878,0.9569242,0.00027818664],"about_ca_topic_score_codex":0.77849185,"about_ca_topic_score_gemma":0.83609325,"teacher_disagreement_score":0.95621604,"about_ca_system_score_codex":0.00063622824,"about_ca_system_score_gemma":0.0006940457,"threshold_uncertainty_score":0.9999707},"labels":[],"label_agreement":null},{"id":"W4313259420","doi":"10.3390/v15010046","title":"A Bivalent Live Attenuated Influenza Virus Vaccine Protects against Drifted H1N2 and H3N2 Clinical Isolates in Swine","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Virology; Reassortment; Biology; Bivalent (engine); Vaccination; Virus; Pandemic; Attenuated vaccine; Viral shedding; Infectious disease (medical specialty); Gene; Disease; Coronavirus disease 2019 (COVID-19); Medicine; Virulence; Genetics","score_opus":0.14045321860042007,"score_gpt":0.42099864020336,"score_spread":0.28054542160293994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313259420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897591,0.006800015,0.0000026262837,0.00084959064,0.00012988913,0.0019018762,0.0001050087,0.0001978759,0.0002540313],"genre_scores_gemma":[0.9812734,0.0022303332,0.00025991997,0.014986159,0.00024680616,0.0007423296,0.000021546504,0.00008557624,0.00015392115],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965121,0.00048933283,0.0009733404,0.00069713435,0.0006137627,0.00071433774],"domain_scores_gemma":[0.99833155,0.00051186164,0.0002031758,0.0005151526,0.00016360627,0.00027465698],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012308771,0.00036249286,0.0008383168,0.0005678046,0.00036615843,0.00004009058,0.00022686837,0.00012947067,0.00035299332],"category_scores_gemma":[0.0019336664,0.0003130049,0.00012815963,0.0009141819,0.0001878213,0.00018384436,0.0009279522,0.0012460481,0.00012844727],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009299414,0.002230275,0.83509195,0.00043252742,0.0008567207,0.00108907,0.0028051538,0.00022434669,0.120939374,0.000054853714,0.0074486234,0.01952766],"study_design_scores_gemma":[0.018719945,0.004615674,0.75942874,0.00045440395,0.00014384955,0.00007411041,0.0015787107,0.001917231,0.010283521,0.00012790177,0.20178822,0.0008677075],"about_ca_topic_score_codex":0.00083416805,"about_ca_topic_score_gemma":0.00020333902,"teacher_disagreement_score":0.19433959,"about_ca_system_score_codex":0.00021884109,"about_ca_system_score_gemma":0.00021289395,"threshold_uncertainty_score":0.9999322},"labels":[],"label_agreement":null},{"id":"W4313362193","doi":"10.3390/v15010097","title":"HLA-A, HSPA5, IGFBP5 and PSMA2 Are Restriction Factors for Zika Virus Growth in Astrocytic Cells","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Zika virus; Neurotropic virus; Virology; Immunology; Flavivirus; Medicine; Biology; Virus","score_opus":0.025756451741322343,"score_gpt":0.26832164583206214,"score_spread":0.2425651940907398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313362193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973893,0.0009872951,0.00007715166,0.00020738711,0.0002498046,0.00060969446,0.0003224235,0.000054179454,0.000102724625],"genre_scores_gemma":[0.9982235,0.00013547929,0.000043633918,0.0010380294,0.00013501386,0.00020311624,0.00003534453,0.000027711134,0.0001581687],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895644,0.00004819152,0.00022038433,0.0003016599,0.00021569156,0.0002576282],"domain_scores_gemma":[0.99942654,0.00013991508,0.000097667275,0.00017025557,0.000036447964,0.00012915986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094052266,0.00014870317,0.00028045566,0.00017404032,0.00015291358,0.000025399262,0.000074387426,0.00004232572,0.00014489528],"category_scores_gemma":[0.000110601715,0.00013602462,0.00009009402,0.00020360637,0.000026141077,0.00008445555,0.000059054466,0.00015254787,0.0000037410898],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0050380076,0.0014967945,0.7962201,0.00058409636,0.0002597111,0.00019987959,0.00081299845,0.0002506364,0.16703348,0.0020907146,0.020510485,0.0055030817],"study_design_scores_gemma":[0.015513004,0.0033966962,0.81742775,0.0001755833,0.00088904036,0.000024780782,0.0074158404,0.0028230355,0.06898322,0.00070154126,0.08175589,0.0008935915],"about_ca_topic_score_codex":0.00053204835,"about_ca_topic_score_gemma":0.0000827446,"teacher_disagreement_score":0.09805026,"about_ca_system_score_codex":0.000117888034,"about_ca_system_score_gemma":0.000075109725,"threshold_uncertainty_score":0.5546923},"labels":[],"label_agreement":null},{"id":"W4313470100","doi":"10.3390/v15010023","title":"Concerning the Etiology of Syrah Decline: A Fresh Perspective on an Old and Complex Issue Facing the Global Grape and Wine Industry","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Vine; Wine grape; Biology; Wine; Disease; Outbreak; Horticulture; Medicine; Virology; Pathology","score_opus":0.10311206385532742,"score_gpt":0.3402061853400312,"score_spread":0.2370941214847038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313470100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99063754,0.00071410264,1.17782754e-7,0.007337385,0.000031047868,0.0001494129,0.0007573016,0.000016852424,0.00035623342],"genre_scores_gemma":[0.9972767,0.00015260788,0.000004904979,0.0023900876,0.00012205963,0.000017400984,0.000009696327,4.6789188e-7,0.000026077596],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990687,0.00028852347,0.0000970732,0.00019037737,0.0001872776,0.00016807034],"domain_scores_gemma":[0.9990866,0.000727549,0.000058766753,0.000045129815,0.00004467608,0.000037285157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002964936,0.000085790874,0.0001329781,0.0000064651404,0.00074456225,0.000032178727,0.00022070533,0.000038601145,0.00022939271],"category_scores_gemma":[0.00024105755,0.000025104646,0.00001889781,0.00018934131,0.00041426637,0.000044871507,0.00044229534,0.0002765812,0.0000013828057],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065200625,0.00022063861,0.24489564,0.0000115205385,0.00023140576,0.000025910136,0.0039921487,0.00017003516,0.70062184,0.015248502,0.017484717,0.016445626],"study_design_scores_gemma":[0.0003133123,0.0015832194,0.8602691,0.000019090348,0.000023608844,0.000042578966,0.052698046,0.00018432457,0.0019496102,0.0023073985,0.08041778,0.00019188737],"about_ca_topic_score_codex":0.004598083,"about_ca_topic_score_gemma":0.0015301439,"teacher_disagreement_score":0.69867224,"about_ca_system_score_codex":0.00002730512,"about_ca_system_score_gemma":0.0000063622133,"threshold_uncertainty_score":0.69509566},"labels":[],"label_agreement":null},{"id":"W4313470170","doi":"10.3390/v15010025","title":"Correction: Sutcliffe et al. Common Oral Medications Lead to Prophage Induction in Bacterial Isolates from the Human Gut. Viruses 2021, 13, 455","year":2022,"lang":"en","type":"erratum","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Prophage; Virology; Microbiology; Biology; Genetics; Bacteriophage; Escherichia coli; Gene","score_opus":0.03125693566001636,"score_gpt":0.3090058466041754,"score_spread":0.27774891094415904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313470170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84566367,0.00042752767,0.000032859407,0.0106717395,0.12412198,0.0018804552,0.0022118755,0.0002419206,0.014747981],"genre_scores_gemma":[0.5424438,0.004060102,0.0006640002,0.1385564,0.012452873,0.0034595984,0.014108792,0.00085579394,0.28339863],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99729884,0.00048720857,0.00064367446,0.00079368154,0.0003633606,0.00041322602],"domain_scores_gemma":[0.9985419,0.00021755778,0.00035506015,0.0007468063,0.000018013401,0.00012068129],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00034098336,0.00044484372,0.0004650816,0.00014729919,0.0007937741,0.00028036843,0.00080353237,0.00028027472,0.053828187],"category_scores_gemma":[0.00011754681,0.0003744628,0.0001527138,0.00060924806,0.00025023852,0.0006099726,0.0007917464,0.0017626258,0.0014635359],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038702015,0.00020479926,0.0012741586,0.0000024180438,0.00004247723,0.0000070339293,0.00063641084,0.000034659963,0.20024088,0.00000317291,0.7958197,0.0016955849],"study_design_scores_gemma":[0.00020989862,0.00013324249,0.09321479,0.00009984931,0.00006471794,0.0000122106885,0.0003036037,0.000015616426,0.0018075496,0.000022531138,0.90374273,0.0003732419],"about_ca_topic_score_codex":0.07217571,"about_ca_topic_score_gemma":0.10524111,"teacher_disagreement_score":0.30321985,"about_ca_system_score_codex":0.000595092,"about_ca_system_score_gemma":0.00009952339,"threshold_uncertainty_score":0.9998707},"labels":[],"label_agreement":null},{"id":"W4313471230","doi":"10.3390/v15010128","title":"Molecular Epidemiology of HIV-1 in Ghana: Subtype Distribution, Drug Resistance and Coreceptor Usage","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; AIDS Vancouver; Simon Fraser University","funders":"Canadian Institutes of Health Research; National Nuclear Security Administration; U.S. Department of Energy","keywords":"Subtyping; Molecular epidemiology; Drug resistance; Genetic diversity; Virology; Biology; Lentivirus; Human immunodeficiency virus (HIV); Genome; Genetics; Genotype; Gene; Medicine; Viral disease; Population; Environmental health","score_opus":0.02482569369899479,"score_gpt":0.2868745044932633,"score_spread":0.2620488107942685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313471230","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97851384,0.019391667,0.000043339576,0.00043935407,0.00008297247,0.0001468913,0.001207313,0.000013350792,0.00016128503],"genre_scores_gemma":[0.9981055,0.00014865662,0.00004160131,0.00013628013,0.0000031137536,0.00005927497,0.0005601316,0.0000056040217,0.0009398328],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986893,0.00062767,0.00021043897,0.00019716134,0.000025665366,0.0002497915],"domain_scores_gemma":[0.999381,0.00035309186,0.000071002854,0.0001551766,0.000020044283,0.000019683399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000402908,0.000080053855,0.00022642319,0.000060302136,0.00011070378,0.0000010584845,0.000110131135,0.000040833504,0.0006930107],"category_scores_gemma":[0.00027219384,0.00007245208,0.000030039973,0.00014198133,0.00022744552,0.000025883995,0.00012480882,0.00017031575,0.0001005224],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010476713,0.00048611325,0.8597338,0.000046048623,0.0002151771,0.00008128753,0.0006709449,0.000015455165,0.07107586,0.009960744,0.055613875,0.0010530174],"study_design_scores_gemma":[0.005070663,0.0005400621,0.30650508,0.000048293783,0.000054068994,0.000040194038,0.0011496751,0.000005060033,0.14529608,0.0017559896,0.5391121,0.00042275072],"about_ca_topic_score_codex":0.0002749642,"about_ca_topic_score_gemma":0.000163698,"teacher_disagreement_score":0.55322874,"about_ca_system_score_codex":0.000057204143,"about_ca_system_score_gemma":0.000050692157,"threshold_uncertainty_score":0.7587981},"labels":[],"label_agreement":null},{"id":"W4313472389","doi":"10.3390/v15010123","title":"Pharmacokinetic and Pharmacodynamic Effects of Polyclonal Antibodies against SARS-CoV2 in Mice","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Emergent BioSolutions (Canada)","funders":"Joint Program Executive Office for Chemical, Biological, Radiological and Nuclear Defense; Defense Health Agency; U.S. Department of Defense","keywords":"Polyclonal antibodies; Pharmacodynamics; Pharmacokinetics; Pharmacology; Antibody; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Medicine; Virology; 2019-20 coronavirus outbreak; Immunology; Internal medicine; Infectious disease (medical specialty); Outbreak","score_opus":0.029121924137410583,"score_gpt":0.35971296407643877,"score_spread":0.33059103993902816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313472389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948461,0.0034535723,0.000003991973,0.00009569242,0.00017569674,0.00041149487,0.000030129127,0.000038808095,0.0009445251],"genre_scores_gemma":[0.9629332,0.00012011344,0.00003792435,0.03674711,0.00006030923,0.000058444,0.0000027697322,0.00002518293,0.000014985344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986679,0.00012276304,0.00023743657,0.0002682985,0.0004073119,0.00029627004],"domain_scores_gemma":[0.9995384,0.0002102236,0.00005947602,0.00013135902,0.00003119263,0.00002929776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021135833,0.00015031334,0.0003045206,0.00039004945,0.00007726017,0.000009400206,0.00014011285,0.000029932804,0.000019980496],"category_scores_gemma":[0.00008009427,0.00014358,0.000058861056,0.0004115739,0.00014346857,0.00007348563,0.00021768635,0.00032381335,0.000010214162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050988473,0.00026567382,0.13365503,0.00041099376,0.000061319224,0.0002765145,0.00024419453,0.0000030943881,0.85590076,0.000019362831,0.00022727955,0.008425919],"study_design_scores_gemma":[0.0036551603,0.00025714884,0.038950745,0.00008434782,0.000059957692,0.00004099542,0.00005748768,0.0011333385,0.9211321,0.000031884727,0.03444877,0.00014805776],"about_ca_topic_score_codex":0.00035946388,"about_ca_topic_score_gemma":0.000007925972,"teacher_disagreement_score":0.09470428,"about_ca_system_score_codex":0.000075924654,"about_ca_system_score_gemma":0.0001292902,"threshold_uncertainty_score":0.5855022},"labels":[],"label_agreement":null},{"id":"W4313472439","doi":"10.3390/v15010113","title":"Stress Exposure of Evolved Bacteriophages under Laboratory versus Food Processing Conditions Highlights Challenges in Translatability","year":2022,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Shell Canada","keywords":"Bacteriophage; Biology; Computational biology; Food science; Genetics; Gene","score_opus":0.052078297788759616,"score_gpt":0.27657604907672567,"score_spread":0.22449775128796606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313472439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99693525,0.0010235884,0.000004864596,0.00029756804,0.0002446901,0.00015747214,0.00071733363,0.00003513923,0.0005841237],"genre_scores_gemma":[0.9996162,0.00011354091,0.00008581898,0.00005122162,0.000017494585,0.000061784405,0.000021402993,0.000013602628,0.000018956842],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990527,0.00011818943,0.0002354089,0.00027089252,0.00014553328,0.00017728357],"domain_scores_gemma":[0.99958074,0.0000665424,0.0000935096,0.00020560795,0.000010488773,0.00004311736],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010203487,0.00011859668,0.00015646672,0.00005465418,0.00018347793,0.000016686497,0.00018089013,0.000038648057,0.0041653602],"category_scores_gemma":[0.000008079862,0.00012046438,0.000044942724,0.00022943235,0.00013696111,0.00041659118,0.00010724741,0.0001278195,0.000016596508],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018101168,0.00072790746,0.002857527,0.00005971768,0.000028737291,0.0000072072085,0.0022429996,0.0008692093,0.99053913,0.00018214055,0.00008538778,0.0022190423],"study_design_scores_gemma":[0.0018118005,0.00076784095,0.8163884,0.000057431134,0.000046981608,0.000005378544,0.005401344,0.00002550428,0.15110077,0.0001413485,0.023838853,0.0004143454],"about_ca_topic_score_codex":0.00020737127,"about_ca_topic_score_gemma":0.002301723,"teacher_disagreement_score":0.8394383,"about_ca_system_score_codex":0.00013875465,"about_ca_system_score_gemma":0.00002901318,"threshold_uncertainty_score":0.996745},"labels":[],"label_agreement":null},{"id":"W4313559124","doi":"10.3390/v15010161","title":"Human Adenovirus Gene Expression and Replication Is Regulated through Dynamic Changes in Nucleoprotein Structure throughout Infection","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Nucleoprotein; Biology; Epigenetics; Virology; Viral replication; Gene; Virus; DNA; DNA virus; Genetics; Genome","score_opus":0.07116919684605096,"score_gpt":0.4083957818780681,"score_spread":0.33722658503201713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313559124","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.113902524,0.8841476,0.000010078277,0.000040174204,0.00008666886,0.0013787351,0.00033673763,0.00008070846,0.000016787359],"genre_scores_gemma":[0.002391878,0.9953726,0.00010637564,0.00017728566,0.00023902628,0.00027678255,0.0009618177,0.00017352818,0.00030071253],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.997426,0.00031928817,0.00046623644,0.001147627,0.00025694064,0.00038392574],"domain_scores_gemma":[0.9982851,0.00001736756,0.00032710598,0.0012439729,0.000062171275,0.00006428337],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002732251,0.00047713783,0.00072893733,0.0002404928,0.00017142527,0.00006806503,0.00030414335,0.00084566034,0.00005937195],"category_scores_gemma":[0.00006663738,0.00042220706,0.00013098687,0.0004839891,0.00012599218,0.000014396156,0.00030448486,0.00038296523,0.000029072895],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011014857,0.0000413098,0.000025063899,0.0024323685,0.00013285439,0.0000059619524,0.00008683251,0.0000035203966,0.7797091,0.000005761633,0.0004684191,0.21697867],"study_design_scores_gemma":[0.0005148608,0.00095455936,0.00010504875,0.0026094809,0.000109378416,0.000021988115,0.0000105242925,0.000004612257,0.45924315,0.00026888918,0.53547984,0.00067765056],"about_ca_topic_score_codex":0.00035242498,"about_ca_topic_score_gemma":0.0023264047,"teacher_disagreement_score":0.5350114,"about_ca_system_score_codex":0.00009525799,"about_ca_system_score_gemma":0.00011375616,"threshold_uncertainty_score":0.999823},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":[],"domain":null,"study_design":"design_other","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"split"},{"id":"W4313891235","doi":"10.3390/v15010176","title":"Tumor-Infiltrating T Cells in EBV-Associated Gastric Carcinomas Exhibit High Levels of Multiple Markers of Activation, Effector Gene Expression, and Exhaustion","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Schulich School of Medicine and Dentistry; Canadian Institutes of Health Research","keywords":"Effector; Gene; Cancer research; Biology; Gene expression; Tumor-infiltrating lymphocytes; Cancer; Immunology; Genetics","score_opus":0.025481114186817595,"score_gpt":0.2606117763254095,"score_spread":0.2351306621385919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313891235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909353,0.000113541704,0.0000335545,0.00004327763,0.000071326955,0.00036457312,0.00015901517,0.00005664467,0.000064538806],"genre_scores_gemma":[0.9994553,0.000045818262,0.00023232312,0.00009060702,0.000025894518,0.000024670439,0.00004900297,0.000024827514,0.00005160594],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99876356,0.00009151131,0.00041017905,0.00022801067,0.0002676524,0.00023906917],"domain_scores_gemma":[0.99906933,0.00030307614,0.0003131855,0.00014307749,0.00010610829,0.0000652327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003069071,0.00014670705,0.00038272914,0.00030425808,0.000048851824,0.00000718725,0.000050373277,0.00010140372,0.000056422585],"category_scores_gemma":[0.0006648165,0.00013706394,0.000053234497,0.00079227006,0.000056612203,0.00012198551,0.000034206892,0.00010023792,0.0000043423393],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021593382,0.00006504971,0.32024392,0.00011257683,0.000026041866,0.000004792433,0.00019370209,0.0002650758,0.67765516,0.0000018122466,0.0009105682,0.00030536702],"study_design_scores_gemma":[0.0024747152,0.00015841218,0.49873167,0.00028560232,0.000026231028,4.0870614e-7,0.00038174298,0.00029157143,0.49755067,0.000013309658,0.000010802185,0.00007488054],"about_ca_topic_score_codex":0.0011036448,"about_ca_topic_score_gemma":0.000051580362,"teacher_disagreement_score":0.18010451,"about_ca_system_score_codex":0.000104238046,"about_ca_system_score_gemma":0.00009888292,"threshold_uncertainty_score":0.5589305},"labels":[],"label_agreement":null},{"id":"W4316465163","doi":"10.3390/v15010238","title":"Determining the Protective Efficacy of Toll-Like Receptor Ligands to Minimize H9N2 Avian Influenza Virus Transmission in Chickens","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; University of Guelph","funders":"Ontario Veterinary College, University of Guelph; Wellcome Trust; Chicken Farmers of Saskatchewan; Biotechnology and Biological Sciences Research Council; Egg Farmers of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"Virology; Biology; Viral shedding; Influenza A virus subtype H5N1; Immune system; Spleen; Transmission (telecommunications); Antiviral protein; Virus; Immunology; Gene","score_opus":0.11659773982091788,"score_gpt":0.3998556180169574,"score_spread":0.28325787819603954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4316465163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99653715,0.00027893888,0.000026277854,0.00061606866,0.000112559195,0.0017949267,0.000050628776,0.0001417344,0.00044173267],"genre_scores_gemma":[0.9938131,0.00030371855,0.0007986689,0.003951041,0.00020918141,0.00054215715,0.000007790058,0.00008945675,0.00028490173],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976951,0.00012339927,0.00055614696,0.00040653293,0.0006380193,0.0005808095],"domain_scores_gemma":[0.9983958,0.0007030385,0.000100270314,0.00044829593,0.00016351251,0.00018908101],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006580248,0.00026425952,0.0005416941,0.00054941926,0.00019680441,0.000025222771,0.00027143344,0.00012980402,0.00008341215],"category_scores_gemma":[0.0018404736,0.00017487525,0.00013759882,0.001405335,0.00020192623,0.00011907318,0.00018731957,0.0004346279,0.0003077483],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007759785,0.0007718028,0.1771919,0.00051210186,0.00041745784,0.00010143843,0.034274634,0.00022897156,0.67737883,0.000039385173,0.005251652,0.096072026],"study_design_scores_gemma":[0.004859039,0.00083755277,0.66525024,0.00092199515,0.000061387596,0.000002937606,0.00096800993,0.00008793517,0.2788002,0.000033714357,0.047887202,0.00028981062],"about_ca_topic_score_codex":0.00030093102,"about_ca_topic_score_gemma":0.00007704403,"teacher_disagreement_score":0.4880583,"about_ca_system_score_codex":0.000108543914,"about_ca_system_score_gemma":0.00015672356,"threshold_uncertainty_score":0.7131206},"labels":[],"label_agreement":null},{"id":"W4317425455","doi":"10.3390/v15020285","title":"Activated Chicken Gamma Delta T Cells Are Involved in Protective Immunity against Marek’s Disease","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Guelph","funders":"Biotechnology and Biological Sciences Research Council; Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Granzyme B; Biology; CD8; T-cell receptor; Immunology; Adoptive cell transfer; Marek's disease; Peripheral blood mononuclear cell; Immunity; Immune system; T cell; Cytotoxic T cell; Virology; Spleen; Cellular immunity; Virus; In vitro","score_opus":0.045358918396419624,"score_gpt":0.30210181742902864,"score_spread":0.256742899032609,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317425455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99745023,0.00007301398,0.0000072026205,0.00018482603,0.00012507252,0.00090907025,0.00014633746,0.00031078976,0.00079344056],"genre_scores_gemma":[0.99863106,0.00015099926,0.000028824665,0.0004667209,0.000055707256,0.00028481326,0.00009379353,0.00003829787,0.00024977853],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892896,0.00011809443,0.00020809655,0.0002708945,0.00017361545,0.00030034973],"domain_scores_gemma":[0.9991955,0.000078267556,0.0000750381,0.00039098822,0.00006598213,0.00019423103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013005939,0.00019003791,0.00025903268,0.0003220809,0.00014104767,0.000023279683,0.000073499716,0.00009069729,0.00010694392],"category_scores_gemma":[0.00019860936,0.0001597953,0.00008151541,0.00089311437,0.000061830535,0.00014106158,0.00007805351,0.00028037213,0.00051855907],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019031022,0.0030181678,0.8157238,0.0003359473,0.00061776006,0.0017782726,0.0009289864,0.00021683525,0.13281827,0.00004043114,0.0029531491,0.03966529],"study_design_scores_gemma":[0.002783433,0.00013629615,0.84351075,0.00044274895,0.00007853998,0.0000014089002,0.00046780764,0.0001706899,0.13816817,0.00019293212,0.013789978,0.0002572371],"about_ca_topic_score_codex":0.0015188832,"about_ca_topic_score_gemma":0.0005440098,"teacher_disagreement_score":0.039408054,"about_ca_system_score_codex":0.00019505712,"about_ca_system_score_gemma":0.00014327298,"threshold_uncertainty_score":0.6665201},"labels":[],"label_agreement":null},{"id":"W4317733699","doi":"10.3390/v15020308","title":"Oncolytic Measles Virus Encoding MicroRNA for Targeted RNA Interference","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"Deutsche Krebshilfe","keywords":"Oncolytic virus; Measles virus; microRNA; Biology; RNA interference; Gene knockdown; Virology; Virus; Drosha; Viral replication; Cancer research; RNA; Measles; Gene; Genetics","score_opus":0.06451415034616206,"score_gpt":0.3487863586025725,"score_spread":0.2842722082564104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317733699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99711794,0.0009233242,0.0004967237,0.00018272808,0.00023737902,0.0003940897,0.00015799048,0.000092042166,0.000397796],"genre_scores_gemma":[0.9963698,0.000704408,0.00025952194,0.00073596154,0.00034445128,0.00015710785,0.00011608879,0.000056899393,0.0012557985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868363,0.00007087211,0.00021320961,0.0004152554,0.00015842235,0.00045861155],"domain_scores_gemma":[0.99927795,0.00006476643,0.000061854465,0.00038418325,0.00010426479,0.000106999265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034559483,0.00018333875,0.00016797397,0.00013226391,0.00014546588,0.000052403906,0.00039926867,0.00012566123,0.00007036479],"category_scores_gemma":[0.00020146836,0.00015639375,0.00011607818,0.00025377594,0.000093199604,0.000007026604,0.0001614163,0.0000950409,0.00022671255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010514262,0.00003416429,0.00013952568,0.000024129222,0.00007224514,0.0000039253327,0.0000545072,0.000046567642,0.98276573,0.000020100515,0.008881766,0.0069058985],"study_design_scores_gemma":[0.00053557206,0.0012939891,0.00011725521,0.000021372818,0.000010569514,0.0000020778618,0.000070055605,0.00013506394,0.95486116,0.00013582631,0.04260673,0.00021030763],"about_ca_topic_score_codex":0.00003612896,"about_ca_topic_score_gemma":0.00023814767,"teacher_disagreement_score":0.033724964,"about_ca_system_score_codex":0.000030671534,"about_ca_system_score_gemma":0.00014652142,"threshold_uncertainty_score":0.6377552},"labels":[],"label_agreement":null},{"id":"W4317734024","doi":"10.3390/v15020316","title":"The HIV Restriction Factor Profile in the Brain Is Associated with the Clinical Status and Viral Quantities","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Montréal; Montreal Clinical Research Institute; University of Alberta","funders":"National Institute of Mental Health; National Institutes of Health; Canadian Institutes of Health Research; Université Laval","keywords":"Neurocognitive; Viral load; Disease; Virology; Immunology; Medicine; Biology; Human immunodeficiency virus (HIV); Internal medicine; Neuroscience; Cognition","score_opus":0.07507492110082316,"score_gpt":0.35667013884035714,"score_spread":0.281595217739534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317734024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992287,0.0009042569,8.023945e-7,0.0058116163,0.0000763957,0.0002862692,0.00036525232,0.000037766826,0.0002306767],"genre_scores_gemma":[0.9957872,0.001122697,8.030141e-7,0.0004949064,0.00001548275,0.0000693176,0.000093322225,0.0000061586297,0.0024101264],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986838,0.0007150083,0.0001249701,0.00012716201,0.000051852458,0.00029719947],"domain_scores_gemma":[0.99731207,0.0024535768,0.000044733784,0.00015955797,0.000019319255,0.000010746029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005045855,0.00007480085,0.0000942067,0.000034848497,0.00042420175,0.000049346043,0.00012270012,0.00007324617,0.000054595144],"category_scores_gemma":[0.0003680746,0.00002783346,0.000026639573,0.0001852487,0.0003652731,0.00004859318,0.000043255874,0.00026118135,0.0005872028],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006764349,0.0002242641,0.59322566,0.0000052219316,0.00054665544,0.000033619624,0.0042925375,8.0519226e-7,0.0032327177,0.0019048766,0.38770247,0.008154737],"study_design_scores_gemma":[0.0010024777,0.0004668055,0.7901428,0.000010333873,0.000012695709,0.0000023210093,0.0026766239,0.000002777819,0.00069197855,0.00010319087,0.20483133,0.000056707544],"about_ca_topic_score_codex":0.0004410606,"about_ca_topic_score_gemma":0.0011651207,"teacher_disagreement_score":0.19691709,"about_ca_system_score_codex":0.000016955784,"about_ca_system_score_gemma":0.00006696963,"threshold_uncertainty_score":0.75474995},"labels":[],"label_agreement":null},{"id":"W4317735670","doi":"10.3390/v15020309","title":"Molecular Epidemiology of SARS-CoV-2: The Dominant Role of Arginine in Mutations and Infectivity","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Proteases; TMPRSS2; Virology; Biology; Protease; European union; Angiotensin-converting enzyme 2; Coronavirus; Genetics; Enzyme; Coronavirus disease 2019 (COVID-19); Medicine; Biochemistry; Infectious disease (medical specialty); Disease","score_opus":0.09109400899588274,"score_gpt":0.41459268535318944,"score_spread":0.32349867635730667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317735670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981145,0.0008820648,0.00004961427,0.00028628568,0.000020867283,0.00024000989,0.000011736393,0.000015940104,0.0003789565],"genre_scores_gemma":[0.9942602,0.000022884178,0.00003380519,0.0056213895,0.000014538958,0.00003563747,0.0000010705824,0.000009335607,0.0000011356832],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991098,0.00018509223,0.0002563583,0.00014853913,0.000116118594,0.00018408668],"domain_scores_gemma":[0.99846476,0.0011718196,0.000072516545,0.00022564526,0.000055149303,0.000010118209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083219924,0.00007427164,0.0003167155,0.00022928005,0.000022913988,0.0000014407885,0.000070221344,0.000059855443,0.0000016519031],"category_scores_gemma":[0.0020152673,0.000049703445,0.000050262253,0.00053016644,0.0002668581,0.000035149842,0.0000780742,0.00013711961,0.000013148776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006788009,0.00005373408,0.42515108,0.000039322567,0.000021695361,0.000013107994,0.00021569882,0.000004243427,0.5723662,0.00084304356,0.00002575692,0.0011982836],"study_design_scores_gemma":[0.00057122356,0.00014185575,0.2436146,0.000041901236,0.000018365736,0.000006837003,0.0001337721,0.00061729306,0.7489612,0.0026510048,0.003204842,0.000037075344],"about_ca_topic_score_codex":0.0017731448,"about_ca_topic_score_gemma":0.0002278378,"teacher_disagreement_score":0.18153647,"about_ca_system_score_codex":0.000015043568,"about_ca_system_score_gemma":0.00009773035,"threshold_uncertainty_score":0.26804763},"labels":[],"label_agreement":null},{"id":"W4317735710","doi":"10.3390/v15020301","title":"Differential Cellular Sensing of Fusion from within and Fusion from without during Virus Infection","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; St. Joseph’s Healthcare Hamilton; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Nucleic acid; Innate immune system; RNA; Biology; Lipid bilayer fusion; Cell fusion; Endogeny; Fusion protein; Cell biology; Fusion; RIG-I; DNA; Fusion gene; Virus; Virology; Biochemistry; Immune system; Cell; Gene; Genetics; Recombinant DNA","score_opus":0.019073338990950494,"score_gpt":0.2468375495991336,"score_spread":0.2277642106081831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317735710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975642,0.0007327251,0.0001545822,0.000012842484,0.0011581985,0.00010393888,0.00009074232,0.00014510352,0.000037659087],"genre_scores_gemma":[0.9990314,0.00039568704,0.000025944819,0.000031725052,0.000055189976,0.0000016722239,0.0001242636,0.000020629388,0.0003134863],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99903274,0.00022356225,0.00027850177,0.00024914028,0.000040297768,0.00017576692],"domain_scores_gemma":[0.9994917,0.00013366228,0.00013328904,0.0001962313,0.000029815144,0.000015290409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006851375,0.00015760564,0.00026729936,0.00017170669,0.00019169532,0.000018482833,0.000059992108,0.00020180267,0.0004804779],"category_scores_gemma":[0.000068674526,0.00013572953,0.000056421286,0.00010474262,0.00012705401,0.00009410643,0.00018266261,0.0001831896,0.00027839208],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010056039,0.00003393429,0.010949489,0.000011696468,0.00009376351,0.000005307326,0.0008298914,0.0000033676429,0.9855961,0.000010254246,0.00007292757,0.0013876698],"study_design_scores_gemma":[0.00089260377,0.00009036911,0.1008863,0.00012912939,0.00004663139,0.0000045510683,0.00016080162,0.00005115782,0.89696765,0.00006802466,0.00057214854,0.00013062095],"about_ca_topic_score_codex":0.008582815,"about_ca_topic_score_gemma":0.00033570352,"teacher_disagreement_score":0.089936815,"about_ca_system_score_codex":0.000016547336,"about_ca_system_score_gemma":0.000016277048,"threshold_uncertainty_score":0.9980191},"labels":[],"label_agreement":null},{"id":"W4317932637","doi":"10.3390/v15020323","title":"The Frequency and Function of NKG2C+CD57+ Adaptive NK Cells in Cytomagalovirus Co-Infected People Living with HIV Decline with Duration of Antiretroviral Therapy","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University; Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Flow cytometry; Cytomegalovirus; Stimulation; Antiretroviral therapy; Natural killer cell; Human immunodeficiency virus (HIV); Biology; Virology; Medicine; Viral load; Internal medicine; Cytotoxic T cell; Viral disease; In vitro; Herpesviridae","score_opus":0.015107807834011208,"score_gpt":0.23746718595782573,"score_spread":0.2223593781238145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317932637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99817675,0.000539683,0.0003095105,0.00002647211,0.00033337224,0.00021903479,0.000010877315,0.000055312797,0.00032900073],"genre_scores_gemma":[0.9986131,0.0008210155,0.000017885362,0.000056857265,0.00001254943,0.0000176253,0.00003484549,0.000014936998,0.0004111451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913555,0.0001870681,0.0002961244,0.0001675643,0.000050552775,0.00016311488],"domain_scores_gemma":[0.99909264,0.00039232167,0.00024830573,0.0001515071,0.00010728626,0.00000794115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022391204,0.0001294306,0.00020147054,0.00017511587,0.00013316747,0.000013235531,0.000063103995,0.00009444318,0.00012617972],"category_scores_gemma":[0.00004664074,0.000080558595,0.00002830117,0.00038363255,0.00016777404,0.00022457536,0.00002086703,0.00016490971,0.000054438577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016760707,0.00007390613,0.13436991,0.000012202919,0.000094326184,7.0261484e-7,0.00052502664,0.000018811072,0.86128545,0.00013831913,0.00035095573,0.0014543374],"study_design_scores_gemma":[0.0012725615,0.002200756,0.41490814,0.00009193822,0.000022749193,0.000008760547,0.0010852237,0.00004309944,0.57922184,0.000013936825,0.0010232896,0.00010771906],"about_ca_topic_score_codex":0.0006697639,"about_ca_topic_score_gemma":0.0006067895,"teacher_disagreement_score":0.2820636,"about_ca_system_score_codex":0.000019790838,"about_ca_system_score_gemma":0.00005026208,"threshold_uncertainty_score":0.3285084},"labels":[],"label_agreement":null},{"id":"W4317932799","doi":"10.3390/v15020334","title":"SARS-CoV-2 Nsp2 Contributes to Inflammation by Activating NF-κB","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Chemokine; Inflammasome; Inflammation; Downregulation and upregulation; NF-κB; Biology; NFKB1; Immunology; Protein subunit; Cell biology; Virology; Cancer research; Gene; Transcription factor; Genetics","score_opus":0.02068139009634742,"score_gpt":0.2948126624670615,"score_spread":0.2741312723707141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317932799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975553,0.00028594062,0.0003940046,0.00045964078,0.00012662949,0.00016125049,0.000027532642,0.000056954814,0.0009327257],"genre_scores_gemma":[0.9973722,0.00012576325,0.000053384836,0.0016147177,0.00010777196,0.00004938922,0.00025303187,0.000023779312,0.00039995342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929386,0.00002850404,0.00016627848,0.00019881106,0.00007796253,0.00023456488],"domain_scores_gemma":[0.9996625,0.000016942948,0.000049620696,0.00019661254,0.000055356137,0.000018928946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012294116,0.000112348665,0.00009828448,0.00006643632,0.0001009928,0.000038566446,0.00013037697,0.00009417328,0.000007192378],"category_scores_gemma":[0.00024861933,0.00011147404,0.00004453312,0.00021727168,0.00002457665,0.000008938275,0.00009697638,0.000047498455,0.00029431924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040564533,0.0000072991506,0.00083946134,0.00000690597,0.0000346134,5.88719e-7,0.000049578677,0.000017827037,0.9393315,0.000057643043,0.054250874,0.0053631584],"study_design_scores_gemma":[0.00019911535,0.000044115786,0.00038465307,0.000008584625,0.000002962343,2.3693576e-7,0.00007892389,0.000010986766,0.65119535,0.000041223386,0.34793997,0.000093849405],"about_ca_topic_score_codex":0.000046863865,"about_ca_topic_score_gemma":0.000024207895,"teacher_disagreement_score":0.2936891,"about_ca_system_score_codex":0.000009248283,"about_ca_system_score_gemma":0.00002746349,"threshold_uncertainty_score":0.45457792},"labels":[],"label_agreement":null},{"id":"W4318206463","doi":"10.3390/v15020356","title":"Single Dose of Recombinant Chimeric Horsepox Virus (TNX-801) Vaccination Protects Macaques from Lethal Monkeypox Challenge","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Monkeypox; Virology; Vaccinia; Orthopoxvirus; Vaccination; Smallpox vaccine; Smallpox; Virus; Poxviridae; Biology; Cowpox; Population; Outbreak; Medicine; Recombinant DNA; Environmental health","score_opus":0.055408073414329975,"score_gpt":0.3006509158386486,"score_spread":0.24524284242431865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318206463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99087757,0.004761726,0.000021157273,0.0002807327,0.0008924801,0.0005628722,0.00024865434,0.00032465108,0.0020301484],"genre_scores_gemma":[0.99662536,0.0016119487,0.000055477434,0.0000862715,0.000074662625,0.00011070608,0.00018557429,0.000040674215,0.001209344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812853,0.0003393642,0.00039356513,0.00042794866,0.00011455792,0.000596002],"domain_scores_gemma":[0.9989824,0.00027073245,0.00018989888,0.0004132603,0.00008906187,0.00005461192],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025947424,0.00024387565,0.00040295726,0.0003486514,0.00018358683,0.000023122191,0.0003685021,0.00030540038,0.001154333],"category_scores_gemma":[0.00030523638,0.00021207784,0.00012435952,0.00045294416,0.00013233739,0.00022973087,0.00021578398,0.00036655233,0.0025922684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037870233,0.00037677828,0.00035357574,0.000036303103,0.0001797199,0.000033541997,0.0005680229,0.000002063897,0.92742753,0.0001941358,0.0048740963,0.06557552],"study_design_scores_gemma":[0.0013753321,0.0006925904,0.019302351,0.00006737732,0.000024563777,0.000007995477,0.0001742369,0.0000129824775,0.914942,0.001582157,0.06155556,0.00026281516],"about_ca_topic_score_codex":0.0036478743,"about_ca_topic_score_gemma":0.0003165394,"teacher_disagreement_score":0.0653127,"about_ca_system_score_codex":0.00005222774,"about_ca_system_score_gemma":0.00007967054,"threshold_uncertainty_score":0.9997587},"labels":[],"label_agreement":null},{"id":"W4318208104","doi":"10.3390/v15020358","title":"A Renaissance for Oncolytic Adenoviruses?","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research","keywords":"Oncolytic virus; The Renaissance; Virology; Medicine; Biology; Art; Virus; Art history","score_opus":0.18994355109229374,"score_gpt":0.44861777414955173,"score_spread":0.25867422305725796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318208104","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005953107,0.9969385,0.00007017382,0.000013289848,0.00028819815,0.0016870731,0.0006442953,0.00008869353,0.00021019457],"genre_scores_gemma":[0.0000033008935,0.9932857,0.00020469744,0.0003227551,0.0012278013,0.001480051,0.0004277552,0.00029345482,0.0027544943],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99756914,0.00016257292,0.00053583126,0.0008476307,0.00026665552,0.0006181882],"domain_scores_gemma":[0.99829453,0.00015081366,0.0002575906,0.0010138477,0.00012933328,0.00015386773],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00046712966,0.0005073747,0.0010333367,0.00021151394,0.00014209597,0.00006946585,0.0008124436,0.0005462299,0.000047247584],"category_scores_gemma":[0.00048668578,0.00044311624,0.0005541549,0.00050631945,0.00013587472,0.000003932687,0.0002459471,0.00024418466,0.0007301884],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054474553,0.00008663115,0.000001114731,0.010171007,0.0007268531,0.000014501612,0.000008267381,0.0000025424595,0.0023810675,0.000048683214,0.070399046,0.91561556],"study_design_scores_gemma":[0.0003170392,0.0015371211,1.6374413e-7,0.0020542787,0.00020458059,0.0000098830615,0.0000039393954,0.0000012464253,0.0035630483,0.000034721703,0.99178797,0.00048601453],"about_ca_topic_score_codex":0.0000120527475,"about_ca_topic_score_gemma":0.00013520995,"teacher_disagreement_score":0.9213889,"about_ca_system_score_codex":0.00006591002,"about_ca_system_score_gemma":0.0009790574,"threshold_uncertainty_score":0.99980205},"labels":[],"label_agreement":null},{"id":"W4318208179","doi":"10.3390/v15020351","title":"Mitochondria Dysfunction at the Heart of Viral Myocarditis: Mechanistic Insights and Therapeutic Implications","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Natural Sciences and Engineering Research Council of Canada; University of British Columbia; St. Paul's Foundation","keywords":"Mitochondrion; Myocarditis; Crosstalk; Viral Myocarditis; Dilated cardiomyopathy; Cardiomyopathy; Biology; Pathogenesis; Inflammation; Virus; Immunology; Medicine; Cell biology; Heart failure; Internal medicine","score_opus":0.13085687994804712,"score_gpt":0.4012460531797443,"score_spread":0.2703891732316972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318208179","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00037348436,0.99765724,0.000035957306,0.0001219682,0.00030171493,0.0010039726,0.00008205992,0.00006731047,0.00035626662],"genre_scores_gemma":[0.00025102097,0.99786115,0.000014345736,0.00016558742,0.00013595993,0.0003984486,0.00007195289,0.000043043623,0.0010584994],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988573,0.00019432914,0.00036150534,0.0002712266,0.00013552942,0.00018010379],"domain_scores_gemma":[0.9988887,0.00033941158,0.00012629724,0.00051811215,0.00008236193,0.000045118388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012955985,0.00019895066,0.0007981316,0.00024147454,0.0002643225,0.000020419064,0.000088721536,0.00022014066,0.00006241233],"category_scores_gemma":[0.00009484656,0.00011454257,0.00024307425,0.0004346895,0.0002549599,0.000035533867,0.00012818862,0.00035369364,0.0003701348],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010714342,0.00029470254,0.0001880424,0.012967397,0.0041893474,0.000012437371,0.00010317165,6.587013e-7,0.011266365,0.01662365,0.014646957,0.9396001],"study_design_scores_gemma":[0.00018138974,0.0003456743,0.00047524984,0.001464361,0.0011412984,0.00015462837,0.000018032506,0.0000019359732,0.00013048462,0.0006455094,0.9953355,0.00010591587],"about_ca_topic_score_codex":0.00007944745,"about_ca_topic_score_gemma":0.000020713791,"teacher_disagreement_score":0.9806886,"about_ca_system_score_codex":0.00008621063,"about_ca_system_score_gemma":0.00016445275,"threshold_uncertainty_score":0.47574577},"labels":[],"label_agreement":null},{"id":"W4318478799","doi":"10.3390/v15020379","title":"Comparative Genomics of a Polyvalent Escherichia-Salmonella Phage fp01 and In Silico Analysis of Its Receptor Binding Protein and Conserved Enterobacteriaceae Phage Receptor","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Pontificia Universidad Católica de Valparaíso; Memorial University of Newfoundland","keywords":"Biology; Bacteriophage; Lytic cycle; Escherichia coli; Salmonella enterica; Microbiology; Genome; Genetics; Gene; Virus","score_opus":0.03932924851703192,"score_gpt":0.28337369375070426,"score_spread":0.24404444523367233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318478799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99888384,0.00010895724,0.0000043330865,0.000039909843,0.00006735149,0.00036418406,0.00043101536,0.000020804533,0.00007959633],"genre_scores_gemma":[0.998797,0.0003557694,0.00038911254,0.00003181516,0.000008058975,0.000024298039,0.000034255067,0.000012322326,0.00034738504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989335,0.00011074881,0.00038085203,0.0002947927,0.00008547447,0.00019462727],"domain_scores_gemma":[0.99947107,0.000080224585,0.00022458257,0.00014482367,0.00001038684,0.0000689332],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018246422,0.00015488043,0.00042116325,0.00021187445,0.000054576496,0.000028305845,0.000108436,0.000059321013,0.0012415029],"category_scores_gemma":[0.000024726241,0.0001496637,0.00006575284,0.00080671196,0.00018996112,0.00022080292,0.00020438124,0.000092333736,0.000081655824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011263715,0.00010741268,0.020200346,0.000031558448,0.00015613368,0.0000013759161,0.0014248905,0.000041128544,0.9776302,0.0000023304476,0.000102698665,0.00018930234],"study_design_scores_gemma":[0.00039007366,0.00008844249,0.16134343,0.000064323525,0.000098186545,8.082688e-7,0.0006021527,0.00039969073,0.83530945,9.648137e-7,0.0015545725,0.00014790507],"about_ca_topic_score_codex":0.0005766504,"about_ca_topic_score_gemma":0.00058128126,"teacher_disagreement_score":0.14232074,"about_ca_system_score_codex":0.00006783373,"about_ca_system_score_gemma":0.000009150098,"threshold_uncertainty_score":0.9996715},"labels":[],"label_agreement":null},{"id":"W4318479211","doi":"10.3390/v15020360","title":"SKI-1/S1P Facilitates SARS-CoV-2 Spike Induced Cell-to-Cell Fusion via Activation of SREBP-2 and Metalloproteases, Whereas PCSK9 Enhances the Degradation of ACE2","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Furin; Proprotein Convertases; Cell fusion; Cell biology; Proprotein convertase; Cell; Lipid bilayer fusion; Metalloproteinase; Chemistry; Ectodomain; Fusion protein; HEK 293 cells; Biology; LDL receptor; Receptor; Biochemistry; Cholesterol; Recombinant DNA; Matrix metalloproteinase; Lipoprotein; Enzyme","score_opus":0.07910546669166003,"score_gpt":0.3523000492974394,"score_spread":0.2731945826057794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318479211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976557,0.0003275764,0.0001892962,0.0002457562,0.0000640132,0.0008999865,0.000023072236,0.000067887384,0.0005267041],"genre_scores_gemma":[0.99678296,0.00004088989,0.00016391365,0.0027690788,0.00004404641,0.000075860466,0.000010515875,0.000024213867,0.00008853754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983003,0.00012816249,0.0003839487,0.0003283199,0.000600217,0.00025902028],"domain_scores_gemma":[0.9988194,0.00037949008,0.00017323902,0.0003806681,0.00021504199,0.00003213223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051950506,0.0001907819,0.0003429678,0.00033972977,0.00010124297,0.000027599459,0.00017937878,0.00011394796,0.0000138005225],"category_scores_gemma":[0.00037023282,0.00013233142,0.000084348125,0.0008789342,0.0001234466,0.0002190994,0.00013205304,0.00017347932,0.00007556958],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037780212,0.00016325607,0.0047255214,0.00032589267,0.000039667644,0.0000028120849,0.0006947977,8.943504e-7,0.98555493,0.00001940434,0.0003236098,0.0077714175],"study_design_scores_gemma":[0.0007582561,0.0004861131,0.005183749,0.00011956393,0.00005469874,0.0000016720091,0.0007082739,0.00013857846,0.98118526,0.00014751447,0.01109364,0.0001226865],"about_ca_topic_score_codex":0.0029074855,"about_ca_topic_score_gemma":0.00010423557,"teacher_disagreement_score":0.010770029,"about_ca_system_score_codex":0.000039385337,"about_ca_system_score_gemma":0.00015046005,"threshold_uncertainty_score":0.5396319},"labels":[],"label_agreement":null},{"id":"W4318479365","doi":"10.3390/v15020385","title":"Identifying Longitudinal CD4:CD8 Ratio Trajectories Indicative of Chronic Renal Disease Risk among People Living with HIV: An Application of Growth Mixture Models","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV-related health complications and treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; Providence Health Care; University of British Columbia; AIDS Vancouver","funders":"Canadian Institutes of Health Research; Ministry of Health, British Columbia","keywords":"Kidney disease; Medicine; Incidence (geometry); Internal medicine; Rate ratio; Human immunodeficiency virus (HIV); Demography; Confidence interval; Immunology","score_opus":0.029241097404569465,"score_gpt":0.31210349726414005,"score_spread":0.28286239985957057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318479365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9767123,0.00045218505,0.021770837,0.00006344243,0.00001648594,0.00063908414,0.00016844491,0.00010293697,0.000074324336],"genre_scores_gemma":[0.9985799,0.00033786154,0.0005073078,0.000011201736,0.000059628466,0.0002457205,0.00018398091,0.000028614451,0.00004576127],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987566,0.000071157134,0.0003501028,0.00032699175,0.00029373713,0.00020143669],"domain_scores_gemma":[0.99847436,0.00014365885,0.000594852,0.00040464895,0.00020427082,0.00017823295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001457533,0.00015273372,0.00029306073,0.00024814828,0.00019369782,0.000011800813,0.00010348007,0.000065757435,0.000021602316],"category_scores_gemma":[0.000090440764,0.00012294397,0.00005469877,0.00083135674,0.00012639599,0.0003206621,0.000031716947,0.00015964474,0.000017775856],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013900826,0.00038745842,0.99142945,0.0003674169,0.00016747002,0.000004141419,0.0030901902,0.000989516,0.0015402625,0.0013173134,0.000058992173,0.0005087567],"study_design_scores_gemma":[0.0006311834,0.0002883921,0.9849431,0.00049483473,0.00035349865,0.000002349925,0.00028850712,0.010616901,0.0017276495,0.0005441855,0.0000062392332,0.00010314696],"about_ca_topic_score_codex":0.0010678427,"about_ca_topic_score_gemma":0.000537156,"teacher_disagreement_score":0.021867665,"about_ca_system_score_codex":0.00009842812,"about_ca_system_score_gemma":0.00026947452,"threshold_uncertainty_score":0.50135094},"labels":[],"label_agreement":null},{"id":"W4318778368","doi":"10.3390/v15020409","title":"Hepatitis B Blood Donor Screening Data: An Under-Recognized Resource for Canadian Public Health Surveillance","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Université de Sherbrooke; BC Centre for Disease Control; University of British Columbia; Public Health Ontario; Héma-Québec; University of Manitoba; Public Health Agency of Canada; University of Toronto; Canadian Blood Services; University of Ottawa","funders":"","keywords":"Medicine; Hepatitis B; Internal medicine; Vaccination; Immunology; Hepatitis; Hepatitis C; Hepatitis B vaccine; Hepatitis B virus; Hepatitis A; Cohort; HBsAg; Virus","score_opus":0.2536622429733869,"score_gpt":0.374900129978961,"score_spread":0.12123788700557409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318778368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9445562,0.0018239376,0.0011586467,0.040380545,0.00048729818,0.0020157816,0.0075457213,0.0011058346,0.0009260873],"genre_scores_gemma":[0.966583,0.0023343125,0.004923969,0.020419488,0.0008230048,0.00019942808,0.0038354883,0.0001495693,0.00073174917],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740165,0.00017755221,0.00043086306,0.00067444646,0.00030599945,0.0010094905],"domain_scores_gemma":[0.9974803,0.000413433,0.00012872418,0.0010084971,0.00016228695,0.0008068033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014375782,0.00023369776,0.0005597796,0.0004318751,0.00068964966,0.000102927246,0.0003542753,0.000094291085,0.000082500235],"category_scores_gemma":[0.0014774787,0.00023128734,0.00006070177,0.00074213016,0.000102883496,0.00034757788,0.0001706137,0.00016939337,0.00012409383],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006193656,0.00011160665,0.8339358,0.00016167632,0.00037760288,0.000060695183,0.00050747686,0.0000052716023,0.00018980488,0.00030627009,0.11836326,0.045918576],"study_design_scores_gemma":[0.0018065874,0.0004102046,0.35683417,0.0001001618,0.00004254802,0.000017346274,0.00024089744,0.0007029922,0.000090339825,0.000048274498,0.63942206,0.00028441122],"about_ca_topic_score_codex":0.6128952,"about_ca_topic_score_gemma":0.9641428,"teacher_disagreement_score":0.5210588,"about_ca_system_score_codex":0.00014250501,"about_ca_system_score_gemma":0.0010949079,"threshold_uncertainty_score":0.94316244},"labels":[],"label_agreement":null},{"id":"W4319027842","doi":"10.3390/v15020416","title":"COVID-19: The Many Ways to Hurt Your Heart","year":2023,"lang":"en","type":"editorial","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Pandemic; 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus; Betacoronavirus; Medicine; Virology; Coronavirus Infections; Intensive care medicine; Disease; Internal medicine; Infectious disease (medical specialty); Outbreak","score_opus":0.18967884647622676,"score_gpt":0.5071111367999622,"score_spread":0.31743229032373543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319027842","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006941325,0.00046840796,0.00032541857,0.07417713,0.92115426,0.0016189686,0.0009776554,0.0006693721,0.0005393473],"genre_scores_gemma":[0.00011511415,0.0027768568,0.00011022196,0.05545451,0.9316332,0.0004947302,0.00009581647,0.00016885446,0.009150719],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99474245,0.0001551888,0.00066243956,0.00093136687,0.0026190944,0.0008894571],"domain_scores_gemma":[0.9140514,0.081384055,0.00017307751,0.0018985934,0.00056531123,0.0019275576],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0022878966,0.00046154688,0.0010723191,0.0003184218,0.0004338419,0.00009888671,0.000746351,0.00064067217,0.0006420728],"category_scores_gemma":[0.58730954,0.00028916856,0.00041379203,0.0007036769,0.00037831705,0.000050278875,0.0012857127,0.0019302685,0.0061657587],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045196209,0.00008565771,0.00015848632,0.0008133326,0.00027486729,0.00020671192,0.00017184319,0.000015343941,0.00013570533,0.00008374174,0.9972578,0.0003445173],"study_design_scores_gemma":[0.00083891855,0.0006080964,0.0003636988,0.0002879665,0.00019574589,4.021983e-7,0.000076010336,0.000006464908,0.000044309218,0.00034659696,0.99695027,0.0002815189],"about_ca_topic_score_codex":0.0035245845,"about_ca_topic_score_gemma":0.00027670412,"teacher_disagreement_score":0.5850216,"about_ca_system_score_codex":0.000713661,"about_ca_system_score_gemma":0.0047439095,"threshold_uncertainty_score":0.9999561},"labels":[],"label_agreement":null},{"id":"W4319317130","doi":"10.3390/v15020433","title":"The Landscape of Expressed Chimeric Transcripts in the Blood of Severe COVID-19 Infected Patients","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Institutes of Health","keywords":"Biology; Transcriptome; Gene; Disease; Immune system; RNA splicing; Virus; Alternative splicing; Coronavirus disease 2019 (COVID-19); Virology; Immunology; Pandemic; Gene expression; Genetics; Medicine; Infectious disease (medical specialty); Messenger RNA; RNA","score_opus":0.02477036562726415,"score_gpt":0.28171605715194853,"score_spread":0.2569456915246844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319317130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99895644,0.00044366837,0.000012388664,0.00010295098,0.000035079363,0.00012048147,0.000073296906,0.0000048896013,0.00025077566],"genre_scores_gemma":[0.9987496,0.00085816,0.0000048944307,0.00024239911,0.000015557107,0.000035121207,0.000046043162,0.0000053264057,0.000042886844],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995464,0.000064789594,0.00013146312,0.00009206959,0.00008275054,0.0000825242],"domain_scores_gemma":[0.9996192,0.000038342572,0.000058774152,0.000236359,0.0000311062,0.000016248063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010605656,0.000050055554,0.0000596582,0.000025519137,0.000047484646,0.000005960849,0.0001761736,0.000031100546,0.000009483999],"category_scores_gemma":[0.00009492491,0.000029357818,0.000034942,0.00022174482,0.00005292873,0.0000019611919,0.000017176555,0.00002886166,0.0000015197106],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000894175,0.00017291059,0.09403087,0.000030657262,0.000050686962,5.1960893e-7,0.0004778587,0.0002152303,0.8984461,0.00012759345,0.0050548124,0.0013033412],"study_design_scores_gemma":[0.002376839,0.00046744492,0.49079582,0.000019369741,0.00005369601,0.0000016077332,0.0006871072,0.000030571035,0.3778195,0.00015499958,0.12740497,0.00018806563],"about_ca_topic_score_codex":0.00007863212,"about_ca_topic_score_gemma":0.000065779044,"teacher_disagreement_score":0.5206266,"about_ca_system_score_codex":0.0000015883838,"about_ca_system_score_gemma":0.000052879765,"threshold_uncertainty_score":0.1197177},"labels":[],"label_agreement":null},{"id":"W4319317517","doi":"10.3390/v15020447","title":"SARS-CoV-2 Omicron Subvariants Balance Host Cell Membrane, Receptor, and Antibody Docking via an Overlapping Target Site","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates","keywords":"Receptor; Docking (animal); Membrane; Lipid bilayer; Biophysics; Cell membrane; Biology; Antibody; Lipid raft; Binding site; Cell biology; Chemistry; Biochemistry; Genetics; Medicine","score_opus":0.04806095846928172,"score_gpt":0.35664358432674387,"score_spread":0.30858262585746216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319317517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961755,0.0010742837,0.00012697173,0.00012009043,0.00038290405,0.00038880442,0.00006451824,0.00033669014,0.0013301836],"genre_scores_gemma":[0.97091913,0.00018491066,0.0003665635,0.02780646,0.0005282324,0.000019683104,0.00004490625,0.00008989806,0.000040218027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99775696,0.00010888876,0.00033065374,0.000646527,0.00045973744,0.0006972127],"domain_scores_gemma":[0.9990082,0.00021256856,0.00009884439,0.0005111624,0.0000959154,0.000073343195],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00050926814,0.0002906376,0.00045777322,0.00037143892,0.00021980927,0.00013232601,0.00020954985,0.00017410009,0.000028396307],"category_scores_gemma":[0.00016804392,0.00027290033,0.00007829056,0.0007653574,0.00012771055,0.00044566006,0.0001791281,0.00034967478,0.0007358116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025540212,0.00009725716,0.14037038,0.00023561482,0.000036081852,0.00013568555,0.0004354146,7.145757e-7,0.85686594,0.000015555925,0.0011319569,0.00042000058],"study_design_scores_gemma":[0.0013850565,0.00018905607,0.01577177,0.0001532153,0.000026169939,0.00001843913,0.00009591155,0.0017294561,0.8452695,0.000024869885,0.13506052,0.00027600717],"about_ca_topic_score_codex":0.0009953397,"about_ca_topic_score_gemma":0.00005434934,"teacher_disagreement_score":0.13392857,"about_ca_system_score_codex":0.00007531085,"about_ca_system_score_gemma":0.00014323626,"threshold_uncertainty_score":0.99997234},"labels":[],"label_agreement":null},{"id":"W4319599785","doi":"10.3390/v15020463","title":"Stability of APOBEC3F in the Presence of the APOBEC3 Antagonist HIV-1 Vif Increases at the Expense of Co-Expressed APOBEC3H Haplotype I","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"APOBEC3G; Haplotype; Biology; Ubiquitin; Proteasome; Cytidine deaminase; Enzyme; Restriction enzyme; Degradation (telecommunications); Ubiquitin ligase; Human immunodeficiency virus (HIV); Cell biology; Genetics; Virology; Biochemistry; Gene; Genotype","score_opus":0.048362405586767916,"score_gpt":0.30837959009384824,"score_spread":0.26001718450708033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319599785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953468,0.0014691483,0.000001127983,0.0004040283,0.000073217045,0.00064437307,0.0013969874,0.000021366954,0.00064295926],"genre_scores_gemma":[0.99911547,0.00032204387,0.000003492763,0.000067673456,0.000008457937,0.00008420143,0.000072254785,0.000011376706,0.0003150328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99764395,0.0012173242,0.00040997946,0.00023663133,0.00016674845,0.0003253819],"domain_scores_gemma":[0.9964133,0.0023293626,0.00020113031,0.00095894095,0.00008021763,0.000017062055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085667317,0.00015332193,0.00031455603,0.00006814909,0.00021086953,0.000007449039,0.00075360865,0.00009528735,0.0005408239],"category_scores_gemma":[0.00079127756,0.000070767695,0.00014042405,0.00041344276,0.0015124237,0.000060073387,0.0003310141,0.00019484077,0.00025789172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007922505,0.00062814733,0.15461981,0.00008084951,0.0001401696,0.0000050897015,0.0020846003,0.000012406072,0.83172625,0.00026013664,0.00925895,0.0003913377],"study_design_scores_gemma":[0.00085572683,0.0001768535,0.12418572,0.000048884114,0.000030330208,0.000005134458,0.001614185,0.0000025506804,0.8635105,0.00009371877,0.009409939,0.00006644646],"about_ca_topic_score_codex":0.0045570703,"about_ca_topic_score_gemma":0.001185148,"teacher_disagreement_score":0.031784263,"about_ca_system_score_codex":0.000032137472,"about_ca_system_score_gemma":0.00014136871,"threshold_uncertainty_score":0.68889576},"labels":[],"label_agreement":null},{"id":"W4319599833","doi":"10.3390/v15020465","title":"Specialized DNA Structures Act as Genomic Beacons for Integration by Evolutionarily Diverse Retroviruses","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs","keywords":"Provirus; Biology; Genome; Genetics; Integrase; DNA; Computational biology; Virology; Gene","score_opus":0.051023776582468525,"score_gpt":0.38534342927474907,"score_spread":0.33431965269228053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319599833","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00065614353,0.9939634,0.0020134107,0.000008248459,0.00076402596,0.0008234763,0.0016103251,0.00006417224,0.000096747994],"genre_scores_gemma":[0.0001246232,0.99530137,0.00045273796,0.00013409033,0.0010687071,0.0001637938,0.0020142382,0.00010921184,0.00063120684],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986429,0.000049856746,0.00039020856,0.00050728023,0.00012352312,0.000286199],"domain_scores_gemma":[0.9992426,0.00007906571,0.00017220395,0.00037305724,0.000051084855,0.00008198617],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010346435,0.00039721793,0.0006188512,0.00011718842,0.00011779468,0.000055912817,0.00029739673,0.0004164847,0.000046118403],"category_scores_gemma":[0.00033402047,0.00035341945,0.00041852886,0.000118181866,0.000060916267,0.000004617327,0.00013103124,0.00013566522,0.00006287254],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013403683,0.000063796455,0.000016669224,0.004273425,0.001230325,0.0000058291207,0.000060387647,0.000042604686,0.11665241,0.0006309537,0.30188775,0.57500184],"study_design_scores_gemma":[0.00022190457,0.000120049976,0.00001045534,0.00034807067,0.0003532342,0.000007698936,0.00002415356,0.000002043742,0.006857799,0.00009715829,0.9915756,0.00038181274],"about_ca_topic_score_codex":0.00007075672,"about_ca_topic_score_gemma":0.00006609126,"teacher_disagreement_score":0.68968785,"about_ca_system_score_codex":0.00006225943,"about_ca_system_score_gemma":0.0001808104,"threshold_uncertainty_score":0.99989176},"labels":[],"label_agreement":null},{"id":"W4319968048","doi":"10.3390/v15020496","title":"Altered microRNA Transcriptome in Cultured Human Airway Cells upon Infection with SARS-CoV-2","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; McMaster University; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Transcriptome; microRNA; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Coronavirus disease 2019 (COVID-19); Airway; Sars virus; 2019-20 coronavirus outbreak; Virology; Cell biology; Gene expression; Medicine; Gene; Genetics; Pathology","score_opus":0.027992501840687526,"score_gpt":0.2944077148293028,"score_spread":0.26641521298861526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319968048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99911016,0.00012855156,0.00014230925,0.0000350629,0.000119950906,0.0002270651,0.00003172614,0.000059525013,0.00014566262],"genre_scores_gemma":[0.9991075,0.00007224841,0.00010544514,0.00020625495,0.00014057808,0.000031316027,0.00019717257,0.000030727457,0.000108790366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991604,0.00006234036,0.00016912009,0.0003009815,0.00009411813,0.0002130178],"domain_scores_gemma":[0.9996452,0.0000023495438,0.00005847782,0.00022815142,0.000034732184,0.00003109077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009195496,0.00014894454,0.00011527053,0.00011281414,0.000060228165,0.000027767026,0.00008787027,0.00012169206,0.000010671421],"category_scores_gemma":[0.000007213998,0.0001342395,0.000055679127,0.00025831367,0.000038759263,0.000009810529,0.0000254867,0.00006307334,0.0000621507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085606705,0.000054062817,0.002285744,0.000029493882,0.000021867852,0.0000039740585,0.00007281582,0.00014308757,0.99342674,0.00001114863,0.003748008,0.000117459516],"study_design_scores_gemma":[0.00067058654,0.00012392644,0.016147861,0.000029008295,0.000014467468,0.0000030967162,0.000010531493,0.000022293765,0.95567065,0.000022965794,0.027107432,0.00017717302],"about_ca_topic_score_codex":0.0001715114,"about_ca_topic_score_gemma":0.0005958882,"teacher_disagreement_score":0.037756074,"about_ca_system_score_codex":0.000024537261,"about_ca_system_score_gemma":0.000026770558,"threshold_uncertainty_score":0.54741275},"labels":[],"label_agreement":null},{"id":"W4319982031","doi":"10.3390/v15020490","title":"HIV Drug Resistance in Adults Initiating or Reinitiating Antiretroviral Therapy in Uruguay—Results of a Nationally Representative Survey, 2018–2019","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Dolutegravir; Darunavir; HIV drug resistance; Medicine; Efavirenz; Ritonavir; Drug resistance; Nevirapine; Virology; Human immunodeficiency virus (HIV); Antiretroviral therapy; Internal medicine; Viral load; Microbiology; Biology","score_opus":0.05953505043780295,"score_gpt":0.33955636187568816,"score_spread":0.2800213114378852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319982031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99529845,0.00024527925,0.000002758963,0.00089822075,0.00007443853,0.0005410489,0.00025636933,0.00007065202,0.002612772],"genre_scores_gemma":[0.9888684,0.00054009934,0.0016687555,0.0001892356,0.000044984372,0.00005988273,0.0004888034,0.000030957624,0.008108879],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977638,0.00029060635,0.0007860308,0.00040047558,0.00044862038,0.0003104317],"domain_scores_gemma":[0.9978161,0.0014907301,0.00027145375,0.00022750311,0.00014186148,0.00005233734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010687237,0.00019462981,0.00041870656,0.0005652211,0.000052736108,0.000015017029,0.00011069389,0.0000629787,0.000038882532],"category_scores_gemma":[0.0019159089,0.0001565927,0.00005120284,0.0014809568,0.000065584245,0.00022256467,0.000056818473,0.00017167979,0.00006723582],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0061845058,0.00030585923,0.9635424,0.00009670753,0.000091254864,0.00039319092,0.014062604,0.000012070145,0.0006786464,0.000090794514,0.0136357965,0.00090616173],"study_design_scores_gemma":[0.011070528,0.00012480051,0.9782486,0.0014789258,0.00000830958,0.000002142261,0.0016568813,0.00017746154,0.0064646467,0.00009375909,0.00045782689,0.00021613477],"about_ca_topic_score_codex":0.00088195445,"about_ca_topic_score_gemma":0.005539482,"teacher_disagreement_score":0.014706175,"about_ca_system_score_codex":0.000115237955,"about_ca_system_score_gemma":0.00031756333,"threshold_uncertainty_score":0.6385665},"labels":[],"label_agreement":null},{"id":"W4320492490","doi":"10.3390/v15020517","title":"Correlates of Healthy Aging in Geriatric HIV (CHANGE HIV)—CTN 314","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV-related health complications and treatments","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St. Michael's Hospital; AIDS Vancouver; University of British Columbia; McGill University Health Centre; Sunnybrook Health Science Centre; Maple Leaf Medical Clinic; Women's College Hospital; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Loneliness; Gerontology; Successful aging; Cohort; Quality of life (healthcare); Medicine; Mental health; Psychological resilience; Cohort study; Human immunodeficiency virus (HIV); Healthy aging; Population; Psychology; Environmental health; Psychiatry; Family medicine","score_opus":0.07804467508439376,"score_gpt":0.36554505167710805,"score_spread":0.28750037659271427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320492490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926071,0.002167004,0.000013194726,0.0033483722,0.00014512481,0.0005409148,0.00004845665,0.0001534227,0.0009764031],"genre_scores_gemma":[0.9964858,0.0016931137,0.00020750178,0.0008302687,0.00008075433,0.000116238516,0.000077021876,0.00002463409,0.00048466274],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99901503,0.00003658726,0.00034628695,0.00019591003,0.00013395977,0.00027223057],"domain_scores_gemma":[0.9993544,0.00013609215,0.00010121522,0.00025761258,0.000041616746,0.000109018336],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013720508,0.00010266273,0.00025633007,0.00046952922,0.00006783792,0.0000041533867,0.000057742775,0.000075950185,0.0000946957],"category_scores_gemma":[0.00004406344,0.00009090441,0.00004183463,0.0010442317,0.000026780497,0.000066996254,0.000033674514,0.00014294867,0.0012408675],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085119136,0.00028203175,0.9868225,0.00024361373,0.000033356275,0.00004723869,0.0010742871,0.000015908847,0.00027960795,0.00045688846,0.0054225437,0.0052369474],"study_design_scores_gemma":[0.0023886024,0.00026487967,0.9796112,0.000416739,0.00006350733,0.000015570331,0.00021746178,0.0011171435,0.0002430708,0.00020975544,0.015328674,0.00012339854],"about_ca_topic_score_codex":0.00053964014,"about_ca_topic_score_gemma":0.000037836646,"teacher_disagreement_score":0.00990613,"about_ca_system_score_codex":0.00008061952,"about_ca_system_score_gemma":0.000089218,"threshold_uncertainty_score":0.99953675},"labels":[],"label_agreement":null},{"id":"W4320492825","doi":"10.3390/v15020503","title":"Transcriptional Reprogramming of Autographa Californica Multiple Nucleopolyhedrovirus Chitinase and Cathepsin Genes Enhances Virulence","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Krell Institute; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Autographa californica; Biology; Polyhedrin; Gene; Promoter; Chitinase; Spodoptera; Virology; Transcription (linguistics); Baculoviridae; Molecular biology; Recombinant DNA; Gene expression; Genetics","score_opus":0.020478255958372635,"score_gpt":0.283045045563281,"score_spread":0.2625667896049083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320492825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950669,0.004040335,0.00021214061,0.00002587374,0.0001883875,0.00012403616,0.00019163599,0.00006089274,0.0000897875],"genre_scores_gemma":[0.9969536,0.0022479927,0.00033303734,0.00016130056,0.00013215837,0.00005053759,0.000051757517,0.000019750967,0.00004985598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990377,0.000047864458,0.00022167378,0.00034770876,0.00013077697,0.00021429907],"domain_scores_gemma":[0.9995004,0.000037271533,0.00008777627,0.00023717571,0.00004387423,0.00009347963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011473088,0.00013942535,0.00013563185,0.000079573685,0.00014644003,0.000024797908,0.0001172264,0.00008757177,0.00003265008],"category_scores_gemma":[0.00011049805,0.00012681424,0.00010918696,0.00018224264,0.00019907509,0.000009069904,0.00007523731,0.000046585545,0.000013330403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009427853,0.0000732276,0.024496054,0.000038567232,0.00003710982,0.0000030633132,0.000048863294,0.000044580043,0.96395814,0.000077673605,0.0005679158,0.010560519],"study_design_scores_gemma":[0.0004215779,0.00026851986,0.013278266,0.000041995452,0.00002235517,0.000008013897,0.00012352625,0.00011868593,0.95162034,0.00011910719,0.033773374,0.00020426487],"about_ca_topic_score_codex":0.00024442322,"about_ca_topic_score_gemma":0.00007346101,"teacher_disagreement_score":0.033205457,"about_ca_system_score_codex":0.0000027609422,"about_ca_system_score_gemma":0.000036443187,"threshold_uncertainty_score":0.5171335},"labels":[],"label_agreement":null},{"id":"W4320729124","doi":"10.3390/v15020528","title":"Comparing Control Intervention Scenarios for Raccoon Rabies in Southern Ontario between 2015 and 2025","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Trent University; Université de Montréal; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Ministry of Natural Resources and Forestry; Public Health Agency of Canada","funders":"Compute Canada; Ontario Ministry of Natural Resources and Forestry","keywords":"Rabies; Seroprevalence; Outbreak; Psychological intervention; Rabies virus; Intervention (counseling); Veterinary medicine; Medicine; Geography; Environmental health; Virology; Immunology; Antibody; Psychiatry; Serology","score_opus":0.06407036935771215,"score_gpt":0.3133225538975083,"score_spread":0.24925218453979614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320729124","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99624103,0.0018398331,0.00037585574,0.00052894425,0.00034286198,0.00042048565,0.00006314765,0.00009757286,0.00009024021],"genre_scores_gemma":[0.9950741,0.000023333936,0.000013469778,0.00029155365,0.000042763397,0.0001143514,0.000091052825,0.000011387128,0.0043379893],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878335,0.00023857476,0.00036811834,0.00025692492,0.000015178497,0.00033788057],"domain_scores_gemma":[0.9988771,0.00082978746,0.00011180959,0.0001383756,0.000026540782,0.000016354992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007896758,0.00014406086,0.0004620429,0.00016055675,0.00013821298,0.000013224336,0.00012543831,0.00023386511,0.000117001626],"category_scores_gemma":[0.00023866579,0.00012836973,0.00008781182,0.00007618236,0.00014072435,0.0000968605,0.00005477075,0.00024409128,0.0004445665],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054365676,0.00003269907,0.9829804,0.00002344767,0.00022078978,0.000001558331,0.0011980667,0.00009333755,0.0069786967,0.00022612278,0.0037397267,0.0039615524],"study_design_scores_gemma":[0.013806446,0.00037098868,0.9162535,0.00018049488,0.00018721589,0.000006037553,0.0020399545,0.00025290073,0.001363934,0.0025749076,0.06255845,0.00040516365],"about_ca_topic_score_codex":0.0114650065,"about_ca_topic_score_gemma":0.05289111,"teacher_disagreement_score":0.06672684,"about_ca_system_score_codex":0.000041210944,"about_ca_system_score_gemma":0.000029524204,"threshold_uncertainty_score":0.9951177},"labels":[],"label_agreement":null},{"id":"W4321235103","doi":"10.3390/v15020556","title":"SARS-CoV-2-Induced TSLP Is Associated with Duration of Hospital Stay in COVID-19 Patients","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Dermatology and Skin Diseases","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"AstraZeneca Canada; AstraZeneca","keywords":"Thymic stromal lymphopoietin; Cytokine; Immunology; Medicine; Coronavirus disease 2019 (COVID-19); Internal medicine; Disease","score_opus":0.04564632619226309,"score_gpt":0.3315939821947326,"score_spread":0.28594765600246946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321235103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871045,0.000030969928,0.00000211433,0.0005267336,0.00008820594,0.0002578888,0.000062496074,0.0000847423,0.00023637933],"genre_scores_gemma":[0.9970118,0.000015806381,0.000006824769,0.0027913768,0.000009504776,0.00001846726,0.00010679499,0.00001170633,0.000027733277],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992524,0.000050577128,0.00021060069,0.00014574715,0.00019338808,0.0001473137],"domain_scores_gemma":[0.99952316,0.00011383777,0.00010632594,0.00013188593,0.00007189267,0.00005287914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007599721,0.000086954235,0.00021106885,0.0001598342,0.00003362382,0.000005968896,0.000046612233,0.000083331324,0.000036851266],"category_scores_gemma":[0.00094013213,0.00007030114,0.000031508658,0.0004144828,0.000052792893,0.00012013188,0.000018388797,0.00006887692,0.00005704327],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023065845,0.0004626156,0.96727145,0.00004587303,0.000074260985,0.00011664932,0.0008434377,9.695009e-7,0.004409236,0.000011103119,0.026420048,0.00011368069],"study_design_scores_gemma":[0.0030620384,0.00035757682,0.9130174,0.00012604459,0.000054773212,0.0000013881777,0.00017586847,0.00003658526,0.08249958,0.00012606404,0.00043675484,0.000105916755],"about_ca_topic_score_codex":0.00010210571,"about_ca_topic_score_gemma":0.00008559304,"teacher_disagreement_score":0.07809034,"about_ca_system_score_codex":0.000050875286,"about_ca_system_score_gemma":0.00014902293,"threshold_uncertainty_score":0.28667971},"labels":[],"label_agreement":null},{"id":"W4321373143","doi":"10.3390/v15020580","title":"Search of Novel Small Molecule Inhibitors for the Main Protease of SARS-CoV-2","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Protease; In vivo; Chemistry; IC50; Pharmacology; Coronavirus; Virology; Coronavirus disease 2019 (COVID-19); In vitro; Enzyme; Biology; Biochemistry; Medicine; Infectious disease (medical specialty); Disease; Internal medicine","score_opus":0.17523079744894446,"score_gpt":0.4039058889005162,"score_spread":0.22867509145157175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321373143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99695665,0.00021147513,0.0004290633,0.00042447555,0.000064227075,0.0014694252,0.00010420925,0.000052444484,0.00028802783],"genre_scores_gemma":[0.98720163,0.000008352013,0.0003329576,0.011876878,0.00017777334,0.00029915295,0.0000034565396,0.000051473085,0.00004833934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867916,0.000039089067,0.00028609927,0.00021746424,0.00043969098,0.0003385186],"domain_scores_gemma":[0.99888545,0.00042222138,0.000062925894,0.0004168255,0.00019019471,0.00002238868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000703123,0.00011918555,0.000252417,0.00024038844,0.000060262824,0.000011709435,0.00022932698,0.00007814223,0.000004205893],"category_scores_gemma":[0.0004835231,0.00008036073,0.00014825887,0.00068975,0.00020719664,0.000037153008,0.00013335528,0.00016227787,0.000033092707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045542716,0.00020704416,0.0076366477,0.00042448918,0.000079918194,0.000012605734,0.00029329973,0.000001525684,0.986424,0.00028316432,0.0021967662,0.0019850868],"study_design_scores_gemma":[0.0015892212,0.0003603134,0.0011098313,0.000111807494,0.000034198263,0.000004003043,0.00038293478,0.00067918736,0.97180283,0.00004381431,0.023807408,0.00007443376],"about_ca_topic_score_codex":0.0011823348,"about_ca_topic_score_gemma":0.00008017277,"teacher_disagreement_score":0.021610642,"about_ca_system_score_codex":0.000032806704,"about_ca_system_score_gemma":0.0004124857,"threshold_uncertainty_score":0.32770154},"labels":[],"label_agreement":null},{"id":"W4321373226","doi":"10.3390/v15020575","title":"SARS-CoV-2 Vaccine-Induced T-Cell Response after Three Doses in People Living with HIV on Antiretroviral Therapy Compared to Seronegative Controls (CTN 328 COVAXHIV Study)","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes; Response Biomedical (Canada); University of Ottawa; University of British Columbia; HIV Legal Network; Université du Québec à Montréal; St. Paul's Hospital; Ottawa Hospital; Simon Fraser University; Institute of Infection and Immunity; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Public Health Agency of Canada","keywords":"Immunogenicity; Medicine; Immunology; Vaccination; Immune system; T cell; Peripheral blood mononuclear cell; CD8; Flow cytometry; Tumor necrosis factor alpha; Virology; Cellular immunity; Immunity; Biology; In vitro","score_opus":0.0776842135202183,"score_gpt":0.36830447236179825,"score_spread":0.29062025884157994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321373226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99608105,0.00009778271,0.00001931103,0.00043708095,0.00009461153,0.0026747482,0.0000373008,0.00029399007,0.00026414313],"genre_scores_gemma":[0.9666398,0.0000046336495,0.00003958028,0.03243617,0.000120207,0.0006074913,0.0000021041374,0.00010435262,0.000045668734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996431,0.000539213,0.00049149856,0.00080853514,0.0009001327,0.0008296234],"domain_scores_gemma":[0.99703246,0.0017844577,0.00010796758,0.00080800784,0.0001845389,0.00008259056],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001020713,0.00047003347,0.00089157384,0.0010191471,0.00013966234,0.00012630971,0.0003551751,0.00012246793,0.000021977537],"category_scores_gemma":[0.0005636155,0.0003533741,0.00011388602,0.0019698562,0.000050343257,0.00022074078,0.00016747708,0.0005015538,0.00071173074],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.032788515,0.00082326395,0.52725923,0.00002766641,0.000092756556,0.0004267866,0.0034073596,0.0000037219015,0.43436366,0.0000023680725,0.00049934443,0.00030528643],"study_design_scores_gemma":[0.009234538,0.0062991404,0.63645065,0.00029989154,0.000030614116,0.0000062709623,0.0019318768,0.0001437475,0.34358075,0.000008850528,0.0016704745,0.00034320087],"about_ca_topic_score_codex":0.0016101756,"about_ca_topic_score_gemma":0.005635517,"teacher_disagreement_score":0.10919139,"about_ca_system_score_codex":0.00023102404,"about_ca_system_score_gemma":0.00040962064,"threshold_uncertainty_score":0.9998918},"labels":[],"label_agreement":null},{"id":"W4322628560","doi":"10.3390/v15030646","title":"Manganese Mediates Its Antiviral Functions in a cGAS-STING Pathway Independent Manner","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"Higher Education Discipline Innovation Project; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Sting; Innate immune system; Biology; DNA virus; Virus; CRISPR; RNA interference; Virology; Immune system; RNA; Cell biology; Gene; Immunology; Genetics; Genome","score_opus":0.03465677997837074,"score_gpt":0.27482105052729267,"score_spread":0.24016427054892192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322628560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944355,0.0015397649,0.0000033301258,0.00015183131,0.0011893928,0.00015412804,0.00006263906,0.00023863226,0.00222478],"genre_scores_gemma":[0.985705,0.00010322491,0.000002651612,0.00024937806,0.000039824106,0.000048398786,0.0000755443,0.000021690512,0.0137542775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998791,0.0002333851,0.00026361996,0.0002516512,0.00004136199,0.0004189909],"domain_scores_gemma":[0.99944943,0.0002587959,0.000059569247,0.00018520978,0.00003365399,0.000013336481],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031877428,0.00015931345,0.00021285341,0.00039754488,0.00014344514,0.000021454585,0.00016991417,0.00018225989,0.0007286376],"category_scores_gemma":[0.00027072325,0.00013568036,0.00006894145,0.00035751562,0.00007848426,0.00016194722,0.00014080582,0.00029507672,0.011982468],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027019536,0.00009806445,0.024287626,0.000017358821,0.00007070944,0.00007086005,0.0006783302,0.000007950008,0.9664372,0.0004968732,0.0052808765,0.0022839387],"study_design_scores_gemma":[0.0013825536,0.00022356126,0.16604386,0.00010575436,0.000018022376,0.00005244577,0.0022491536,0.000017799583,0.7282838,0.000059910086,0.10121098,0.00035212253],"about_ca_topic_score_codex":0.0001523225,"about_ca_topic_score_gemma":0.00017008414,"teacher_disagreement_score":0.23815338,"about_ca_system_score_codex":0.0000311294,"about_ca_system_score_gemma":0.000046376503,"threshold_uncertainty_score":0.9887868},"labels":[],"label_agreement":null},{"id":"W4322742156","doi":"10.3390/v15030661","title":"The Cascade of Care for Hepatitis C Treatment in Rwanda: A Retrospective Cohort Study of the 2017–2019 Mass Screening and Treatment Campaign","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Retrospective cohort study; Cohort; Coinfection; Internal medicine; Logistic regression; Hepatitis C; Psychological intervention; Cirrhosis; Family medicine; Human immunodeficiency virus (HIV); Psychiatry","score_opus":0.053957293369565354,"score_gpt":0.35861849589414724,"score_spread":0.3046612025245819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322742156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99444735,0.0007303019,0.0000067216015,0.00013632896,0.000056538778,0.003966864,0.00035951292,0.000019924724,0.00027645472],"genre_scores_gemma":[0.9960746,0.0026941686,0.000057373836,0.000013913563,0.00003749666,0.0006659593,0.000010731617,0.000023837474,0.00042188197],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986339,0.0001513216,0.00029537853,0.00025829108,0.00039863476,0.00026246507],"domain_scores_gemma":[0.9988173,0.00045297394,0.00009963524,0.00042672845,0.00014712653,0.000056191304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028000446,0.00014908251,0.0004563113,0.00012859037,0.00017946414,0.000014128318,0.00009771744,0.00005475971,0.000007629587],"category_scores_gemma":[0.0002485,0.000077763005,0.00008951393,0.0003753821,0.00013794258,0.000039593782,0.000055963028,0.00007764617,0.0000027788856],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030443768,0.00018280407,0.98110396,0.000028541119,0.00030206467,0.000023209974,0.0066459863,0.000013879396,0.0009775009,0.000020885456,0.00019587461,0.010200878],"study_design_scores_gemma":[0.0033046308,0.0040537426,0.9756383,0.00009266862,0.00013643682,0.0000017588306,0.004946866,0.0001616117,0.009413526,0.000017709353,0.0021689842,0.00006381951],"about_ca_topic_score_codex":0.032308083,"about_ca_topic_score_gemma":0.047328927,"teacher_disagreement_score":0.015020846,"about_ca_system_score_codex":0.00042286926,"about_ca_system_score_gemma":0.00016071612,"threshold_uncertainty_score":0.9741359},"labels":[],"label_agreement":null},{"id":"W4323313985","doi":"10.3390/v15030681","title":"Hop Latent Viroid: A Hidden Threat to the Cannabis Industry","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Université de Sherbrooke","keywords":"Hop (telecommunications); Cannabis; Disease; Biology; Terpene; Biotechnology; Environmental health; Toxicology; Medicine; Psychiatry; Engineering; Pathology","score_opus":0.25242283845436964,"score_gpt":0.37696310840141667,"score_spread":0.12454026994704703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323313985","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013942205,0.991299,1.809832e-8,0.0019149748,0.0002596047,0.0009734363,0.0037548032,0.00018698402,0.00021697997],"genre_scores_gemma":[0.0000060518028,0.9938459,0.0000023549705,0.00051481044,0.0008801909,0.0005073631,0.00010725776,0.0000047006492,0.0041314038],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977915,0.00023936287,0.00035545335,0.0005021036,0.00050422084,0.0006073018],"domain_scores_gemma":[0.998734,0.0007439364,0.00012329676,0.00016060368,0.00004611664,0.00019205738],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037539564,0.00039423112,0.0008824052,0.000042578802,0.00042081377,0.00016863989,0.0010819667,0.0004070312,0.00027336882],"category_scores_gemma":[0.00043842825,0.000094964416,0.00029795236,0.0011683751,0.00008851056,0.00006557887,0.0008518552,0.0007858691,0.004118456],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000036472109,0.000018308367,0.000009800183,0.00029549893,0.00013191707,0.000034588826,0.00002990061,1.6565885e-7,0.00011310094,0.000016686832,0.20803873,0.7913077],"study_design_scores_gemma":[0.000015044176,0.00007417435,0.00024615612,0.0015993458,0.000090161266,0.0000086906875,0.00006243791,1.4995906e-7,0.000016295857,0.000018960618,0.9976058,0.00026276446],"about_ca_topic_score_codex":0.0032825875,"about_ca_topic_score_gemma":0.0049003093,"teacher_disagreement_score":0.7910449,"about_ca_system_score_codex":0.00008881438,"about_ca_system_score_gemma":0.000051766576,"threshold_uncertainty_score":0.99665695},"labels":[],"label_agreement":null},{"id":"W4323317828","doi":"10.3390/v15030684","title":"Rooting and Dating Large SARS-CoV-2 Trees by Modeling Evolutionary Rate as a Function of Time","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ancestor; Molecular clock; Genome; Phylogenetic tree; Biology; Most recent common ancestor; Evolutionary biology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Function (biology); Uncorrelated; Phylogenetics; Coronavirus disease 2019 (COVID-19); Genetics; Statistics; Gene; Mathematics; Geography","score_opus":0.07129234776504821,"score_gpt":0.36258400690413306,"score_spread":0.29129165913908484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323317828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99702525,0.0008790623,0.00049744797,0.00007648602,0.000046221194,0.00017595653,0.000031398482,0.00016071055,0.0011074635],"genre_scores_gemma":[0.9914217,0.000017885062,0.000075611344,0.008235097,0.000113048634,0.000018495608,0.000018011167,0.000029985425,0.000070190705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988755,0.000063066385,0.00022432292,0.0002601108,0.0002836288,0.00029338384],"domain_scores_gemma":[0.9994862,0.00017587782,0.00006007002,0.00017507585,0.00008253203,0.000020255764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005140843,0.00011701608,0.00021650123,0.00021196509,0.00013174987,0.000021032909,0.000063859974,0.00007463362,0.000014773018],"category_scores_gemma":[0.00043386762,0.00010639159,0.0000481583,0.0004283612,0.00004250619,0.00018703964,0.00011160536,0.00014931969,0.00021279536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022574137,0.00005368896,0.021886595,0.00008587667,0.00005218044,0.000012535966,0.00010981423,0.000019104134,0.9722556,0.00005771992,0.0034340376,0.0018071044],"study_design_scores_gemma":[0.00227121,0.00048097468,0.0036542192,0.0003767592,0.00010721593,0.000018903831,0.00055781164,0.41302967,0.53996533,0.0006602628,0.03860758,0.00027008122],"about_ca_topic_score_codex":0.00039637438,"about_ca_topic_score_gemma":0.00002370248,"teacher_disagreement_score":0.4322903,"about_ca_system_score_codex":0.000034275537,"about_ca_system_score_gemma":0.00010089575,"threshold_uncertainty_score":0.43385234},"labels":[],"label_agreement":null},{"id":"W4323364975","doi":"10.3390/v15030691","title":"Key Factors and Parameter Ranges for Immune Control of Equine Infectious Anemia Virus Infection","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Queen's University","funders":"Queen's University","keywords":"CTL*; Equine infectious anemia; Latin hypercube sampling; Biology; Virology; Immunology; Immune system; Antibody; Virus; Mathematics; Statistics; Monte Carlo method","score_opus":0.02522139322502391,"score_gpt":0.2700315423957412,"score_spread":0.24481014917071725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323364975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99449927,0.0010904223,0.001024531,0.00003820598,0.002676331,0.00030288484,0.00003454702,0.0001822772,0.00015152908],"genre_scores_gemma":[0.9980227,0.0006127462,0.000004693164,0.00014157337,0.00002716485,0.00004900437,0.000098795805,0.000017308192,0.0010260659],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992639,0.000085027306,0.00026801444,0.00016830044,0.000021215863,0.00019356441],"domain_scores_gemma":[0.99911386,0.00052291906,0.00014399966,0.00013462074,0.00007342498,0.000011177754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016056563,0.00014055475,0.00026326807,0.000219697,0.00013323032,0.000013633168,0.000040780862,0.00017505253,0.0003192544],"category_scores_gemma":[0.0002983353,0.00011515087,0.00009752331,0.00014260536,0.00010166161,0.00016332528,0.000025264342,0.00012752178,0.00016066854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039938506,0.000052836982,0.02617299,0.00003973427,0.00014858169,2.2621994e-7,0.0002062782,0.000014813814,0.968294,0.000107384774,0.002620966,0.0019427757],"study_design_scores_gemma":[0.0024529756,0.0009723065,0.043343645,0.000024434807,0.000089360794,0.000011628014,0.00009561883,0.000026363756,0.8478291,0.00007959191,0.10492175,0.0001532222],"about_ca_topic_score_codex":0.00091442635,"about_ca_topic_score_gemma":0.000055323544,"teacher_disagreement_score":0.12046492,"about_ca_system_score_codex":0.000019413153,"about_ca_system_score_gemma":0.000012525265,"threshold_uncertainty_score":0.46957162},"labels":[],"label_agreement":null},{"id":"W4323566032","doi":"10.3390/v15030700","title":"Differential Impact of IL-32 Isoforms on the Functions of Coronary Artery Endothelial Cells: A Potential Link with Arterial Stiffness and Atherosclerosis","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Atherosclerosis and Cardiovascular Diseases","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; National Institute on Aging; National Institutes of Health","keywords":"Proinflammatory cytokine; Chemokine; Endothelial dysfunction; Medicine; Cytokine; Inflammation; Gene isoform; Immunology; Endothelial stem cell; Cell adhesion molecule; Downregulation and upregulation; Monocyte; Endothelium; Internal medicine; Biology; In vitro","score_opus":0.01999196224940691,"score_gpt":0.22345792280800275,"score_spread":0.20346596055859584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323566032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971765,0.0001294907,0.0001175131,0.000022437207,0.0004513812,0.00025117322,0.001773548,0.000055499404,0.000022413771],"genre_scores_gemma":[0.99940544,0.0002439333,0.0000021361452,0.000031854936,0.0000995415,0.00003938583,0.00006017765,0.000027447817,0.00009005713],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99904424,0.00013824651,0.00023970022,0.00023943331,0.00008773828,0.00025062793],"domain_scores_gemma":[0.9993418,0.00010725545,0.00013504332,0.00034185807,0.000047251728,0.00002681689],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008172855,0.00020512547,0.0003545316,0.00008146115,0.00018559511,0.000019768508,0.00014881114,0.00012347501,0.0005286758],"category_scores_gemma":[0.000013503922,0.00011241494,0.0003322008,0.0001406639,0.00046115447,0.00006944721,0.00007695929,0.00012102965,0.00007920572],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014348659,0.0001885819,0.0026005104,0.000015807786,0.0010786139,0.0000013426509,0.00020311897,0.00008866465,0.9903192,0.00004576459,0.0005212289,0.0035023207],"study_design_scores_gemma":[0.0033198271,0.0008914365,0.85697883,0.0001095233,0.00042453865,0.000016446593,0.0005285445,0.000016020083,0.13702086,0.000037129503,0.0004281398,0.00022872855],"about_ca_topic_score_codex":0.000101075486,"about_ca_topic_score_gemma":0.0000064084843,"teacher_disagreement_score":0.8543783,"about_ca_system_score_codex":0.000012267871,"about_ca_system_score_gemma":0.000052099866,"threshold_uncertainty_score":0.5788629},"labels":[],"label_agreement":null},{"id":"W4324058378","doi":"10.3390/v15030735","title":"Phylogenetic and Evolutionary Studies of Grapevine Pinot Gris Virus Isolates from Canada","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; Ministry of Agriculture, Food and Rural Affairs; Brock University","funders":"Agriculture and Agri-Food Canada; Genome British Columbia; Genome Canada","keywords":"Clade; Subclade; Phylogenetic tree; Biology; Nova scotia; Phylogenetics; Genome; Evolutionary biology; Genetics; Geography; Gene","score_opus":0.07943441358388088,"score_gpt":0.2850637200047474,"score_spread":0.20562930642086652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324058378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9805447,0.016080549,3.4394866e-8,0.00057814387,0.00007869285,0.00009504201,0.0025486362,0.000045375957,0.000028811923],"genre_scores_gemma":[0.9854679,0.014082407,0.000015217547,0.00020651642,0.000099948855,0.000016710886,0.0000509385,8.5349564e-7,0.00005947069],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99908376,0.00005888706,0.00017102063,0.00021659791,0.00022439944,0.0002453084],"domain_scores_gemma":[0.9988289,0.00094391726,0.000053873864,0.000043236923,0.00007054992,0.00005954238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000083898296,0.000117689,0.00022554825,0.00001939919,0.00020151418,0.000010636566,0.00014660969,0.000030706342,0.00006583913],"category_scores_gemma":[0.00021934375,0.00004516911,0.000027597596,0.00038489123,0.00016884263,0.000068793335,0.00023427042,0.000058171463,0.000017426893],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024373661,0.000015969987,0.03274637,0.0000118914195,0.00010854942,0.000009875382,0.000050741553,0.000004868055,0.941275,0.000010966361,0.020411711,0.0053296513],"study_design_scores_gemma":[0.00008877491,0.00013333376,0.91706985,0.0000383472,0.000017301727,0.0000012383748,0.0006961258,0.00002739888,0.05652987,0.0009681071,0.024275154,0.00015450707],"about_ca_topic_score_codex":0.5082254,"about_ca_topic_score_gemma":0.6256779,"teacher_disagreement_score":0.8847452,"about_ca_system_score_codex":0.0000229674,"about_ca_system_score_gemma":0.000023592824,"threshold_uncertainty_score":0.49504942},"labels":[],"label_agreement":null},{"id":"W4324058387","doi":"10.3390/v15030722","title":"Structure-Based Regulatory Role for the 5′UTR of RCNMV RNA2","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Translation (biology); Untranslated region; Five prime untranslated region; Internal ribosome entry site; RNA; Biology; Three prime untranslated region; Nucleic acid structure; Eukaryotic translation; Computational biology; Cell biology; Genetics; Messenger RNA; Gene","score_opus":0.06605771582469112,"score_gpt":0.2891392471639337,"score_spread":0.22308153133924258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324058387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678427,0.00048899744,0.0000010710954,0.0007900043,0.000071596136,0.00023855823,0.0014726645,0.00007094978,0.000081861166],"genre_scores_gemma":[0.99923295,0.00008973213,0.000019192792,0.00028970183,0.00015956303,0.000033814344,0.00003219538,7.716292e-7,0.0001420817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993013,0.0000327158,0.00010759353,0.00012991352,0.00021353451,0.0002149146],"domain_scores_gemma":[0.99852437,0.0012913793,0.000045486813,0.000058075377,0.000050160965,0.0000305248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001877473,0.000073434894,0.0001099001,0.000012924922,0.00022444736,0.00001979277,0.00026558776,0.00003579287,0.000104059945],"category_scores_gemma":[0.0002011919,0.00001982725,0.000065342996,0.00030012487,0.00012313228,0.00004164205,0.000065920765,0.00004737743,0.000021764597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043926022,0.000009660017,0.0015224998,0.000007614558,0.000020612735,5.0168205e-7,0.000019060692,0.00004795323,0.97213614,0.00022470788,0.012042663,0.01392468],"study_design_scores_gemma":[0.00013421569,0.00014257377,0.19403099,0.000014911126,0.000011459571,3.1555516e-7,0.00024378508,0.00032319763,0.6285742,0.0013475576,0.17507325,0.00010353303],"about_ca_topic_score_codex":0.00022837915,"about_ca_topic_score_gemma":0.00055022154,"teacher_disagreement_score":0.34356192,"about_ca_system_score_codex":0.000007759626,"about_ca_system_score_gemma":0.000010193905,"threshold_uncertainty_score":0.17262903},"labels":[],"label_agreement":null},{"id":"W4324143316","doi":"10.3390/v15030745","title":"Human Brain Microvascular Endothelial Cells Exposure to SARS-CoV-2 Leads to Inflammatory Activation through NF-κB Non-Canonical Pathway and Mitochondrial Remodeling","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Mental Health; National Institutes of Health; National Heart, Lung, and Blood Institute; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; National Institute on Drug Abuse; Universidade Federal do Rio de Janeiro","keywords":"RELB; Cell biology; Biology; Transcriptome; Blood–brain barrier; Apoptosis; Mitochondrion; Neuroinflammation; Inflammation; NFKB1; Immunology; Gene expression; Neuroscience; Genetics; Central nervous system; Gene","score_opus":0.03421919425822386,"score_gpt":0.32487635537913334,"score_spread":0.2906571611209095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324143316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99342394,0.000035218254,0.0014942782,0.0023935211,0.0005387472,0.0016212736,0.000030530817,0.0003042511,0.00015824917],"genre_scores_gemma":[0.9749877,0.000013134564,0.0038863046,0.01880385,0.001767572,0.00013038602,0.000026896414,0.00012250865,0.00026168238],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976769,0.00013323089,0.00047065446,0.0006756626,0.0005314437,0.00051212433],"domain_scores_gemma":[0.99850065,0.00043780025,0.00009285935,0.0006546201,0.00010015333,0.0002139076],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039902778,0.0003389368,0.0005123484,0.00031042122,0.00020080847,0.000094881325,0.00021620173,0.00024463914,0.000016397802],"category_scores_gemma":[0.00084023364,0.0003207405,0.00016298541,0.0004021859,0.00007614082,0.00032039895,0.00022240586,0.0002950937,0.0004066302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039040408,0.00005349542,0.0009771602,0.00022606523,0.00006502714,0.0000879699,0.0014171528,0.00023084927,0.9836672,0.00008578696,0.012141931,0.0006569446],"study_design_scores_gemma":[0.0026281553,0.0006347901,0.0016241951,0.00040356594,0.00005178761,0.000011377882,0.00005244103,0.000046530946,0.94802713,0.0000955012,0.046084538,0.00033998347],"about_ca_topic_score_codex":0.00030387004,"about_ca_topic_score_gemma":0.00011376714,"teacher_disagreement_score":0.035640083,"about_ca_system_score_codex":0.00016018188,"about_ca_system_score_gemma":0.00027927043,"threshold_uncertainty_score":0.9999245},"labels":[],"label_agreement":null},{"id":"W4324148933","doi":"10.3390/v15030744","title":"Manipulation of the Cellular Membrane-Cytoskeleton Network for RNA Virus Replication and Movement in Plants","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Endomembrane system; Biology; Viral replication; Cell biology; Plasmodesma; RNA; Organelle; Cytoskeleton; Virology; Virus; Cell; Genetics; Gene; Cytoplasm","score_opus":0.19820498408327436,"score_gpt":0.35064352413520583,"score_spread":0.15243854005193147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324148933","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02008452,0.9759805,8.442008e-7,0.00005682261,0.00011531627,0.0020166473,0.0016719863,0.000035219444,0.00003815073],"genre_scores_gemma":[0.00025946987,0.99891347,0.000010400027,0.000051692114,0.00018536142,0.00026136497,0.00022009981,0.0000026545342,0.000095501004],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986209,0.00014444497,0.00041731435,0.0003498345,0.00022187944,0.0002455847],"domain_scores_gemma":[0.9987441,0.00079696503,0.0002805966,0.00012624371,0.00002278587,0.00002934977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005345943,0.0001793991,0.0005553876,0.000024674038,0.00014112542,0.000024621604,0.0002820452,0.00012945308,0.000009201215],"category_scores_gemma":[0.00015826576,0.000057896264,0.00012792963,0.0003704385,0.000047975536,0.00004790833,0.00018742203,0.00011619642,0.000007760895],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034816727,0.000054503926,0.00017673799,0.003956064,0.000117041855,0.0000021327598,0.000027573371,0.000017178138,0.06250273,0.00028987692,0.002759005,0.93006235],"study_design_scores_gemma":[0.000083688894,0.000077285324,0.0020261165,0.0038476023,0.000070096205,5.9023694e-7,0.000018824789,0.000035175708,0.0042437706,0.00057881424,0.98880094,0.00021706546],"about_ca_topic_score_codex":0.0007343015,"about_ca_topic_score_gemma":0.002155517,"teacher_disagreement_score":0.98604196,"about_ca_system_score_codex":0.00003811473,"about_ca_system_score_gemma":0.000013763996,"threshold_uncertainty_score":0.23609412},"labels":[],"label_agreement":null},{"id":"W4324149056","doi":"10.3390/v15030739","title":"Characterization of Virulent T4-Like Acinetobacter baumannii Bacteriophages DLP1 and DLP2","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; University of Alberta; National Research Council Canada","funders":"U.S. Department of Veterans Affairs","keywords":"Acinetobacter baumannii; Virulence; Microbiology; Phage therapy; Antibiotic resistance; Biology; Pathogen; Antibiotics; Virology; Bacteria; Bacteriophage; Pseudomonas aeruginosa; Escherichia coli; Genetics; Gene","score_opus":0.017408669248727263,"score_gpt":0.248208806778863,"score_spread":0.23080013753013573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324149056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99841005,0.000012847524,0.00002574636,0.00015843492,0.00036650052,0.00015598569,0.00011593892,0.00009755161,0.0006569638],"genre_scores_gemma":[0.9965219,0.00034316315,0.00008390057,0.00060807914,0.00006261327,0.000017835366,0.00007277189,0.00002460514,0.0022651625],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99911064,0.000029887022,0.00025306677,0.0002686159,0.00011463285,0.00022318304],"domain_scores_gemma":[0.99955714,0.000029980001,0.00011741895,0.0002104318,0.000009880155,0.00007514118],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009136632,0.00014934024,0.00017322323,0.000078240686,0.00010346538,0.000050797844,0.00012572455,0.00006313896,0.0031343861],"category_scores_gemma":[0.000012217315,0.00013571024,0.000048049144,0.00026410425,0.00013216476,0.00054411835,0.00022793679,0.000079975085,0.0011414154],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019871208,0.000039006314,0.006353049,0.00001378172,0.000013261745,0.0000039739857,0.0002627691,0.000003011184,0.98613834,0.000011293595,0.0009115968,0.006230017],"study_design_scores_gemma":[0.00015493258,0.0000506779,0.71770126,0.000024354033,0.000015294841,0.0000074376435,0.000033983037,0.000028777424,0.1776211,0.000008466631,0.104223624,0.00013009881],"about_ca_topic_score_codex":0.00027024935,"about_ca_topic_score_gemma":0.00007268623,"teacher_disagreement_score":0.8085173,"about_ca_system_score_codex":0.000033128734,"about_ca_system_score_gemma":0.0000049425935,"threshold_uncertainty_score":0.9996363},"labels":[],"label_agreement":null},{"id":"W4324152556","doi":"10.3390/v15030746","title":"Gender-Responsive Design of Bacteriophage Products to Enhance Adoption by Chicken Keepers in Kenya","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"International Livestock Research Institute; National Commission for Science, Technology and Innovation; National Institute for Health and Care Research; Department of Health and Social Care; International Development Research Centre","keywords":"Typhoid fever; Psychological intervention; Medicine; Environmental health; Biotechnology; Veterinary medicine; Business; Biology; Virology; Nursing","score_opus":0.030822244842147104,"score_gpt":0.2921900344746646,"score_spread":0.26136778963251744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324152556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99843246,0.000024825385,0.0003851143,0.00021314988,0.00018312856,0.00034383434,0.00005398638,0.00004840224,0.00031507245],"genre_scores_gemma":[0.9971238,0.00008286126,0.0011763957,0.00045083257,0.000023548946,0.000038021495,0.000011650887,0.00001729099,0.0010755971],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907905,0.000078914316,0.00020176309,0.00029886767,0.00010971684,0.00023168224],"domain_scores_gemma":[0.9996102,0.000055768425,0.000063490304,0.00020410672,0.000010194482,0.000056258643],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017481203,0.00011237875,0.00012933275,0.000090756366,0.00004907006,0.00002009656,0.00015771197,0.000045545734,0.0009094508],"category_scores_gemma":[0.000098872144,0.000111628426,0.000024943578,0.0006180602,0.000060485923,0.00028463604,0.0001177171,0.00008352985,0.0016787386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007741747,0.00005430246,0.00044043732,0.0000071237323,0.0000048522634,0.0000052235205,0.0008271708,0.0006829504,0.9854735,0.0000017842527,0.009812651,0.0026125857],"study_design_scores_gemma":[0.00009533542,0.000093874805,0.147595,0.00002510033,0.0000054233083,0.0000027682365,0.00016177272,0.000033567656,0.8310475,0.000010760487,0.020779964,0.00014896214],"about_ca_topic_score_codex":0.00046230663,"about_ca_topic_score_gemma":0.00007227977,"teacher_disagreement_score":0.15442602,"about_ca_system_score_codex":0.00009050301,"about_ca_system_score_gemma":0.000014739362,"threshold_uncertainty_score":0.9990986},"labels":[],"label_agreement":null},{"id":"W4327715677","doi":"10.3390/v15030769","title":"An Outbred Guinea Pig Disease Model for Lassa Fever Using a Host-Adapted Clade III Nigerian Lassa Virus","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Lassa fever; Lassa virus; Virology; Outbreak; Biology; Virus; Clade; Virulence; Viral hemorrhagic fever; Marburg virus; Immunology; Ebola virus; Gene; Phylogenetics","score_opus":0.15438502577294033,"score_gpt":0.4115924060546138,"score_spread":0.25720738028167345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327715677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867602,0.00016309053,0.009348875,0.00083535817,0.00025243682,0.0010928346,0.0006502214,0.00057961926,0.00031736752],"genre_scores_gemma":[0.9935129,0.000101400896,0.0009437162,0.0016109268,0.00046672477,0.00016680801,0.00016560407,0.00009909719,0.0029328223],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.998046,0.00006972882,0.0003450581,0.00047740064,0.00042175513,0.0006400978],"domain_scores_gemma":[0.99849313,0.000081547136,0.00007133079,0.0005418239,0.00023110646,0.00058107765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025266162,0.00025653758,0.000380346,0.00042377593,0.00036892507,0.00010508297,0.00015479849,0.00014412317,0.00017388156],"category_scores_gemma":[0.00022666538,0.00022326468,0.00020200442,0.0006729871,0.00010594155,0.0003515777,0.00009396553,0.0002168651,0.00016929493],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002584686,0.00086409866,0.009310442,0.0002367283,0.00026999283,0.0001938974,0.0005413498,0.0064596916,0.95524853,0.00058005634,0.019325064,0.004385485],"study_design_scores_gemma":[0.0033725624,0.00031859308,0.015016187,0.000112313784,0.00020112043,0.000010764966,0.00019895734,0.93837005,0.012579665,0.00024332452,0.029175589,0.00040089208],"about_ca_topic_score_codex":0.0008175232,"about_ca_topic_score_gemma":0.00033689276,"teacher_disagreement_score":0.94266886,"about_ca_system_score_codex":0.0001367599,"about_ca_system_score_gemma":0.0003721227,"threshold_uncertainty_score":0.91044694},"labels":[],"label_agreement":null},{"id":"W4327736684","doi":"10.3390/v15030768","title":"Susceptibility and Permissivity of Zebrafish (Danio rerio) Larvae to Cypriniviruses","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Walloon excellence in life sciences and biotechnology; Medical Research Council Canada; Fonds De La Recherche Scientifique - FNRS; European Commission; European Maritime and Fisheries Fund; Université de Liège; Waalse Gewest","keywords":"Biology; Zebrafish; Danio; Gene; Innate immune system; Transcriptome; Virology; Protein kinase R; Genetics; Cell biology; Gene expression; Immune system","score_opus":0.026898993197518244,"score_gpt":0.27779491179193455,"score_spread":0.2508959185944163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327736684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99757314,0.00052255037,0.000011416842,0.00023424465,0.00023864335,0.0002768778,0.00018602349,0.00019746089,0.0007596568],"genre_scores_gemma":[0.9967507,0.000096844495,0.000029657855,0.0007118472,0.00002281815,0.000011725991,0.000058321402,0.00001538372,0.0023026746],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99901986,0.00009893328,0.00021917376,0.00034580496,0.00003186758,0.00028435988],"domain_scores_gemma":[0.9994625,0.00008492406,0.00006728994,0.0002980309,0.000046352212,0.000040903058],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022872793,0.00016035735,0.00026006688,0.00013020415,0.00012144789,0.000017786351,0.00018827287,0.0001143943,0.00056521816],"category_scores_gemma":[0.00017285933,0.0001385797,0.00006994894,0.00029600694,0.00018771659,0.00010738671,0.0003257406,0.000097992306,0.001156333],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106783824,0.00008404924,0.030185798,0.000058978603,0.00009567408,0.0000046395885,0.00046633725,0.0000015141073,0.9150806,0.0005803043,0.051509213,0.0018261098],"study_design_scores_gemma":[0.00073799514,0.00013855321,0.33164766,0.000048169368,0.000075329495,0.0000040923846,0.0007869754,5.155805e-7,0.3205038,0.0001313082,0.34564173,0.0002838636],"about_ca_topic_score_codex":0.00015759999,"about_ca_topic_score_gemma":0.00020687345,"teacher_disagreement_score":0.5945768,"about_ca_system_score_codex":0.000012087629,"about_ca_system_score_gemma":0.000023463253,"threshold_uncertainty_score":0.9996214},"labels":[],"label_agreement":null},{"id":"W4360615407","doi":"10.3390/v15040815","title":"Genetic Characteristics and Phylogeographic Dynamics of Lagoviruses, 1988–2021","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal","funders":"Shanxi Provincial Key Research and Development Project","keywords":"Biology; Phylogenetic tree; Caliciviridae; Clade; Genetics; Hypervariable region; Genome; Phylogeography; Phylogenetics; Haplotype; Viral evolution; Calicivirus; Virus; Virology; Genotype; Gene","score_opus":0.03385242831128454,"score_gpt":0.31572827080426513,"score_spread":0.2818758424929806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4360615407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99841905,0.00038149403,0.00006400897,0.0005406792,0.00008458805,0.00013724722,0.0002017437,0.000043175085,0.00012799095],"genre_scores_gemma":[0.99311835,0.0055450946,0.0004287617,0.0005997762,0.00011246876,0.000013278281,0.00006652082,0.000018309192,0.00009746278],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989914,0.000070528826,0.0002724123,0.00019271037,0.00014511491,0.00032785948],"domain_scores_gemma":[0.99946666,0.000049636135,0.00006456083,0.00020767194,0.000055184395,0.00015629496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017521987,0.000104276536,0.0003408913,0.00023699613,0.000037729926,0.000008385762,0.00007001511,0.00007002971,0.00010374288],"category_scores_gemma":[0.0004004241,0.0000915118,0.000059746577,0.00031266338,0.00024382758,0.000033096814,0.000095748794,0.00013351081,0.00006744318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001462835,0.000047662747,0.950394,0.00013996394,0.000060529495,0.00013530694,0.000022438067,9.249393e-7,0.01935141,0.0001917141,0.0011175706,0.028392227],"study_design_scores_gemma":[0.00047788027,0.00046929036,0.99356073,0.00007704349,0.000028364368,0.000051134924,0.00005801376,0.0008429792,0.00020115625,0.00018413259,0.0039859912,0.000063298976],"about_ca_topic_score_codex":0.0001958108,"about_ca_topic_score_gemma":0.00009782188,"teacher_disagreement_score":0.043166745,"about_ca_system_score_codex":0.000013117461,"about_ca_system_score_gemma":0.00003128634,"threshold_uncertainty_score":0.37317428},"labels":[],"label_agreement":null},{"id":"W4361007288","doi":"10.3390/v15040853","title":"The EBV Gastric Cancer Resource (EBV-GCR): A Suite of Tools for Investigating EBV-Associated Human Gastric Carcinogenesis","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Ontario Institute for Cancer Research; Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Carcinogenesis; Epigenomics; Epstein–Barr virus; Cancer; Cancer research; Population; Reprogramming; Transcriptome; DNA methylation; Virus; Gene; Computational biology; Immunology; Gene expression; Genetics; Medicine","score_opus":0.08343206011575251,"score_gpt":0.3332060964998414,"score_spread":0.2497740363840889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361007288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945868,0.0023138807,0.000009835594,0.00095178763,0.00014319809,0.0007799738,0.00031884044,0.00021817193,0.0006774581],"genre_scores_gemma":[0.9960924,0.00057094434,0.000049338363,0.0014198768,0.0002025474,0.0003477209,0.00011770996,0.00008140404,0.0011180858],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99778855,0.00010923313,0.0005500866,0.00035695007,0.00048524162,0.0007099581],"domain_scores_gemma":[0.9981462,0.0006887135,0.00043289925,0.00034714388,0.00021640648,0.00016867067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063312415,0.0002523819,0.0004910343,0.00024262336,0.0005650095,0.000076923876,0.0002380995,0.00015629038,0.000037126643],"category_scores_gemma":[0.0018717719,0.00019645637,0.00023994669,0.001736448,0.00017116404,0.00014800981,0.00008241374,0.00019930635,0.000012954228],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049758796,0.00024899954,0.566793,0.00046596976,0.0011288482,0.00002197663,0.002308819,0.0006957359,0.2521063,0.00061301584,0.1412003,0.033919413],"study_design_scores_gemma":[0.018191772,0.0027362246,0.81249076,0.0016301635,0.0022254877,0.0000111982945,0.0126292035,0.0013643978,0.061192997,0.0021679408,0.083953395,0.0014064823],"about_ca_topic_score_codex":0.0021978994,"about_ca_topic_score_gemma":0.00096092763,"teacher_disagreement_score":0.24569772,"about_ca_system_score_codex":0.0002911882,"about_ca_system_score_gemma":0.00035499383,"threshold_uncertainty_score":0.8011259},"labels":[],"label_agreement":null},{"id":"W4361007373","doi":"10.3390/v15040847","title":"An Investigation of the Antiviral Potential of Phytocompounds against Avian Infectious Bronchitis Virus through Template-Based Molecular Docking and Molecular Dynamics Simulation Analysis","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"In silico; Infectious bronchitis virus; Docking (animal); Avian infectious bronchitis; Biology; Virus; Protease; Virology; Coronavirus; Computational biology; Medicine; Biochemistry; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Enzyme","score_opus":0.019922492245443544,"score_gpt":0.26344953121148923,"score_spread":0.2435270389660457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361007373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986929,0.000038604725,0.0006625605,0.000057643007,0.00006402151,0.00020827123,0.00011138138,0.00008275631,0.000081819904],"genre_scores_gemma":[0.99965835,0.000018234718,0.00005606927,0.00015688578,0.000036297246,0.000010408775,0.000060291964,0.0000024520405,0.0000010212192],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99894416,0.00016702013,0.00027345217,0.00023417315,0.00022518207,0.0001559947],"domain_scores_gemma":[0.99944866,0.00010593364,0.00022747467,0.00009586763,0.000095955744,0.00002613714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013186001,0.00013912185,0.00022965312,0.00006366017,0.0002703208,0.000037432703,0.0001256982,0.00007851936,0.0000067790215],"category_scores_gemma":[0.00003843865,0.000066166795,0.00015002623,0.0016584859,0.00024127214,0.00019381143,0.00007561557,0.000078079356,0.0000015649777],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012017193,0.000029715251,0.24716862,0.000009480933,0.00010393064,0.0000016019878,0.000079188205,0.103788435,0.6471182,0.00014438573,0.0000018675264,0.0015425354],"study_design_scores_gemma":[0.0001724193,0.0002456954,0.7366617,0.00002870856,0.00023531252,4.5890863e-7,0.00017107054,0.0913461,0.16997209,0.00095106446,0.000031714888,0.00018366145],"about_ca_topic_score_codex":0.0017074511,"about_ca_topic_score_gemma":0.0018007219,"teacher_disagreement_score":0.4894931,"about_ca_system_score_codex":0.000033960478,"about_ca_system_score_gemma":0.000012507168,"threshold_uncertainty_score":0.26982036},"labels":[],"label_agreement":null},{"id":"W4361275409","doi":"10.3390/v15040887","title":"Effective Treatment of Staphylococcus aureus Intramammary Infection in a Murine Model Using the Bacteriophage Cocktail StaphLyse™","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Cégep de Sherbrooke; Université de Sherbrooke","funders":"Université de Sherbrooke","keywords":"Staphylococcus aureus; Mastitis; Lytic cycle; Antibiotics; Bacteriophage; Microbiology; Staphylococcal infections; Medicine; Virology; Bacteria; Biology; Virus; Escherichia coli","score_opus":0.031398828521220834,"score_gpt":0.2973191418382564,"score_spread":0.2659203133170356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361275409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988254,0.000029444891,0.00015917626,0.000035075544,0.00014988198,0.00046959126,0.00005023043,0.0000509265,0.000230318],"genre_scores_gemma":[0.99930626,0.0002157128,0.00013102943,0.000069936024,0.000037397214,0.00006781967,0.000008030658,0.000017057564,0.00014676404],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991711,0.00007971493,0.00021671451,0.00021493666,0.000092653056,0.0002249224],"domain_scores_gemma":[0.99956137,0.00008353307,0.00009206025,0.00021816378,0.000007458079,0.00003743348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099186545,0.00014855884,0.00017399587,0.00009752134,0.00010871327,0.000027104099,0.00008810027,0.000052492516,0.0003304551],"category_scores_gemma":[0.000014351466,0.00010591872,0.00008008409,0.00048472156,0.00011912458,0.00026465917,0.00010283669,0.000081628765,0.00010716905],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058597405,0.00018588478,0.021298543,0.000007991711,0.000024839375,0.000009518434,0.0008330933,0.029331833,0.94272035,0.0000049051855,0.000110102046,0.0054143304],"study_design_scores_gemma":[0.0007776,0.00034926363,0.73937196,0.000042942625,0.00005043688,0.000005077352,0.00012756491,0.017835619,0.23756486,0.00011338407,0.003539021,0.00022228809],"about_ca_topic_score_codex":0.011837483,"about_ca_topic_score_gemma":0.003116963,"teacher_disagreement_score":0.71807337,"about_ca_system_score_codex":0.00031904771,"about_ca_system_score_gemma":0.000014475112,"threshold_uncertainty_score":0.99474275},"labels":[],"label_agreement":null},{"id":"W4361286052","doi":"10.3390/v15040871","title":"SARS-CoV-2 ORF8: A Rapidly Evolving Immune and Viral Modulator in COVID-19","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Pandemic; Viral pathogenesis; Virology; Immune system; Viral replication; Evasion (ethics); Pathogenesis; Coronavirus disease 2019 (COVID-19); Viral evolution; Immunity; Disease; Biology; Host (biology); Virus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Immunology; Medicine; Infectious disease (medical specialty); Genome; Gene; Genetics","score_opus":0.18028670688963763,"score_gpt":0.44948968788072347,"score_spread":0.26920298099108586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361286052","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0074906964,0.9896057,0.000015204389,0.00006832951,0.0002624169,0.0018248749,0.00007948268,0.00031644537,0.00033684648],"genre_scores_gemma":[0.00016022866,0.96968544,0.0000829062,0.028909331,0.000427425,0.00042427264,0.000021271057,0.00023688885,0.000052255396],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99589604,0.00034429558,0.0011440126,0.0010192295,0.00073354127,0.00086287974],"domain_scores_gemma":[0.9976244,0.00092070265,0.00027962914,0.0009610459,0.000086732376,0.00012747014],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011215897,0.00071788026,0.0027770898,0.0014844557,0.00014357863,0.00017659133,0.0004766133,0.0006307962,0.000024506813],"category_scores_gemma":[0.0025629525,0.0005860148,0.0005100383,0.0014831985,0.00026803,0.00025655623,0.00049818296,0.0011264774,0.0007289984],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005029553,0.0005587775,0.002510702,0.15844335,0.0013810855,0.0040825903,0.0007449941,2.492723e-7,0.016857278,0.00035334533,0.006535517,0.8080292],"study_design_scores_gemma":[0.0014604438,0.00018322136,0.00005619312,0.014855814,0.00037399738,0.00014160528,0.00004519503,0.000043880245,0.0011422128,0.00011642484,0.9810466,0.00053439976],"about_ca_topic_score_codex":0.0023164772,"about_ca_topic_score_gemma":0.00025702183,"teacher_disagreement_score":0.9745111,"about_ca_system_score_codex":0.00069231907,"about_ca_system_score_gemma":0.0024398717,"threshold_uncertainty_score":0.9996591},"labels":[],"label_agreement":null},{"id":"W4362466221","doi":"10.3390/v15040893","title":"Validation of HIV-1 MA Shell Structural Arrangements and Env Protein Interactions Predict a Role of the MA Shell in Viral Maturation","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Northern Alberta Institute of Technology; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Shell (structure); Glycoprotein; Virus; Viral envelope; Viral entry; Biology; Viral matrix protein; Biophysics; Protein structure; Human immunodeficiency virus (HIV); Cluster (spacecraft); Protein domain; Fusion; Chemistry; Virology; Physics; Cell biology; Genetics; Viral replication; Materials science; Computer science; Gene; Biochemistry","score_opus":0.017412288239995428,"score_gpt":0.27544539125504003,"score_spread":0.2580331030150446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362466221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99870646,0.00018161701,0.0000026181874,0.000086187996,0.00007891966,0.000415651,0.00028177493,0.000015131781,0.00023163814],"genre_scores_gemma":[0.9990739,0.000020861618,0.000016574393,0.000007125802,0.0000081406415,0.00004699239,0.000153082,0.0000047975755,0.00066852727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994329,0.00013030377,0.00016727464,0.000106597836,0.00003974732,0.00012318169],"domain_scores_gemma":[0.999752,0.000041068124,0.00007038209,0.000105494895,0.000023044078,0.000008019124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000071123344,0.00006572962,0.00009753142,0.00010503217,0.00005362816,0.000006982932,0.00007348615,0.000045741115,0.00019718173],"category_scores_gemma":[0.000038860722,0.000044604934,0.000027358925,0.00012925423,0.000084798565,0.000115164614,0.00006040342,0.000092525384,0.00012142319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020457892,0.000040694016,0.05000583,0.000021327847,0.000059285052,6.4324036e-7,0.00047989347,0.000012983545,0.9469925,0.00008611171,0.00021257074,0.001883588],"study_design_scores_gemma":[0.0006557724,0.000088571825,0.21558116,0.000045216893,0.000011612189,0.000002472616,0.00022850101,0.000019806315,0.7819117,0.0003102178,0.0011097726,0.000035232435],"about_ca_topic_score_codex":0.00024317807,"about_ca_topic_score_gemma":0.000073006944,"teacher_disagreement_score":0.16557533,"about_ca_system_score_codex":0.000020247315,"about_ca_system_score_gemma":0.000020806197,"threshold_uncertainty_score":0.21590015},"labels":[],"label_agreement":null},{"id":"W4362470687","doi":"10.3390/v15040906","title":"HLA Variation and SARS-CoV-2 Specific Antibody Response","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Human leukocyte antigen; Immune system; Biology; Antibody; Cytotoxic T cell; CD8; Antigen; Vaccination; Antigen presentation; T cell; Virology; Genetics","score_opus":0.23840583363109075,"score_gpt":0.4766072632282166,"score_spread":0.23820142959712587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362470687","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0064304112,0.9911603,0.000027193522,0.000042481573,0.00033905578,0.0011316019,0.000093965406,0.00025473977,0.00052029046],"genre_scores_gemma":[0.000015989506,0.9907619,0.000067863206,0.008143169,0.000624129,0.00009764091,0.000027053768,0.00015089917,0.000111374335],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972168,0.00045556584,0.0006109674,0.00069084443,0.0005814934,0.0004442902],"domain_scores_gemma":[0.99775285,0.0011734506,0.00019766706,0.0007304814,0.00010307917,0.00004246426],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012152833,0.0004329719,0.001464022,0.0008586107,0.00011314112,0.00012796049,0.00023634442,0.00035385473,0.0000133897765],"category_scores_gemma":[0.00083917216,0.0003403084,0.00028847548,0.0010189536,0.00013430293,0.00011251743,0.00018913395,0.00058089994,0.0022292174],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022441605,0.0003850668,0.00049081625,0.041439567,0.0011081469,0.0020508813,0.0005131993,1.3779519e-8,0.09704913,0.00045508283,0.016574236,0.8376897],"study_design_scores_gemma":[0.00048086388,0.00017042586,0.0003245133,0.00674096,0.00036025478,0.00011304104,0.00001068573,0.0000034395298,0.0017803796,0.000045207325,0.98966783,0.00030238452],"about_ca_topic_score_codex":0.00019001846,"about_ca_topic_score_gemma":0.000010746775,"teacher_disagreement_score":0.9730936,"about_ca_system_score_codex":0.0001761065,"about_ca_system_score_gemma":0.0007432984,"threshold_uncertainty_score":0.9999049},"labels":[],"label_agreement":null},{"id":"W4362586263","doi":"10.3390/v15040915","title":"Characterization of a Novel African Swine Fever Virus p72 Genotype II from Nigeria","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Canadian Food Inspection Agency","funders":"","keywords":"African swine fever virus; Outbreak; Virology; Biology; Genotype; Virus; Genome; Gene; Genetics","score_opus":0.07080410903125313,"score_gpt":0.26081404119752427,"score_spread":0.19000993216627116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362586263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99830145,0.000022339213,0.000011392509,0.00057577185,0.00010735236,0.00009890359,0.00042821481,0.000091917755,0.000362676],"genre_scores_gemma":[0.99806875,0.00012214732,0.000025487721,0.0008781315,0.00024357918,0.000010473403,0.00039060233,0.0000011508508,0.0002596507],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99931604,0.000034936915,0.00018462252,0.00019614726,0.00009206548,0.00017620051],"domain_scores_gemma":[0.99969757,0.0000874605,0.00009610064,0.00004587667,0.000024229452,0.000048758906],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010317882,0.00009112156,0.00016672857,0.000019885128,0.0001081789,0.000011062173,0.00015342317,0.00005277674,0.0010789927],"category_scores_gemma":[0.00006356566,0.0000375972,0.000056027453,0.00041084632,0.00004044878,0.000074741496,0.00014352419,0.000031899734,0.00018561188],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052429055,0.00006436359,0.016513221,0.0000024540536,0.000018843844,0.0000011323805,0.00005211585,0.0000017442536,0.9793841,0.00023516327,0.00083556544,0.0028388656],"study_design_scores_gemma":[0.00008732253,0.000091773596,0.92078716,0.0000067637834,0.000012920065,5.5889494e-8,0.00006421857,0.00011887599,0.008035967,0.00014940089,0.07054472,0.00010079809],"about_ca_topic_score_codex":0.0013942482,"about_ca_topic_score_gemma":0.00041230256,"teacher_disagreement_score":0.9713481,"about_ca_system_score_codex":0.000006158209,"about_ca_system_score_gemma":0.0000031513632,"threshold_uncertainty_score":0.9998342},"labels":[],"label_agreement":null},{"id":"W4363674494","doi":"10.3390/v15040937","title":"Recent Advances in Research and Management of Human Monkeypox Virus: An Emerging Global Health Threat","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Monkeypox; Virology; Human health; Global health; Virus; Biology; Medicine; Environmental health; Public health; Vaccinia; Genetics; Pathology","score_opus":0.3167612505815601,"score_gpt":0.5373342508168408,"score_spread":0.2205730002352807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4363674494","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003229269,0.99687594,0.0000011741657,0.000029812687,0.00019707099,0.0010676492,0.00049167767,0.00006741643,0.00094632525],"genre_scores_gemma":[0.000020010713,0.99908924,0.00001788839,0.000030795618,0.000033215805,0.00017900427,0.00024113288,0.000041466767,0.0003472188],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961709,0.0011295722,0.0008358909,0.0006987938,0.00017637595,0.0009884678],"domain_scores_gemma":[0.9988473,0.00018500462,0.00023864074,0.00056324544,0.000073225376,0.000092595554],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015636097,0.00034776476,0.0014083515,0.0005804249,0.000288151,0.000028951354,0.0006078536,0.0003126959,0.00013781367],"category_scores_gemma":[0.000044773402,0.0002844616,0.00010285713,0.0011131556,0.0004850233,0.0002070887,0.0006081662,0.0006982551,0.00026060082],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046274585,0.00018020571,0.000058168982,0.009665908,0.00021715274,0.000035678684,0.000064644184,1.9845139e-7,0.000026151201,0.0027748886,0.0009170582,0.98601365],"study_design_scores_gemma":[0.00039058676,0.00046163535,0.00009046674,0.009468824,0.000035784997,0.000010473463,0.0002447127,8.616208e-8,0.00004976717,0.0009674033,0.9880721,0.00020817968],"about_ca_topic_score_codex":0.0014659766,"about_ca_topic_score_gemma":0.0034139866,"teacher_disagreement_score":0.987155,"about_ca_system_score_codex":0.0002991438,"about_ca_system_score_gemma":0.00025000513,"threshold_uncertainty_score":0.9999608},"labels":[],"label_agreement":null},{"id":"W4366089406","doi":"10.3390/v15040977","title":"Treatment with Toll-like Receptor (TLR) Ligands 3 and 21 Prevents Fecal Contact Transmission of Low Pathogenic H9N2 Avian Influenza Virus (AIV) in Chickens","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Veterinary medicine and infectious diseases","field":"Veterinary","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; University of Guelph","funders":"Ontario Veterinary College, University of Guelph; Wellcome Trust; Chicken Farmers of Saskatchewan; Biotechnology and Biological Sciences Research Council; Egg Farmers of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; Canadian Poultry Research Council","keywords":"Avian influenza virus; Influenza A virus subtype H5N1; Transmission (telecommunications); Toll-like receptor; Virology; Feces; Receptor; Virus; Viral shedding; Biology; Microbiology; Chemistry; Innate immune system; Genetics","score_opus":0.05076141527993134,"score_gpt":0.32647809078048845,"score_spread":0.2757166755005571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366089406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980533,0.0007817492,0.000006776217,0.00003743899,0.00012245713,0.00049192354,0.0001775891,0.00014202892,0.0001867117],"genre_scores_gemma":[0.9979961,0.0013361883,0.000034830948,0.00027867756,0.000071613285,0.000070996655,0.00004245199,0.000046547517,0.00012257278],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985508,0.00010503493,0.00039461066,0.00038559223,0.00022759794,0.0003363758],"domain_scores_gemma":[0.9992875,0.00010307754,0.00010827366,0.0002806707,0.000026362492,0.00019410903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010588926,0.00029704103,0.00045383285,0.00020767949,0.0000865938,0.000019416808,0.000098205586,0.00011200444,0.000250112],"category_scores_gemma":[0.000017161965,0.00021696057,0.00009617434,0.00035512066,0.000077626995,0.00023521727,0.00004182063,0.00010874934,0.00006653648],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0056808926,0.0013632274,0.25196064,0.00039750166,0.00022650116,0.0011220769,0.002605739,0.000013927035,0.7203764,0.000014009548,0.00046732026,0.015771793],"study_design_scores_gemma":[0.020793267,0.07343766,0.7773747,0.0027748111,0.00045985353,0.0009375983,0.001329935,0.00059064134,0.07974295,0.00008198663,0.040988114,0.0014885153],"about_ca_topic_score_codex":0.00053178414,"about_ca_topic_score_gemma":0.00006294921,"teacher_disagreement_score":0.6406334,"about_ca_system_score_codex":0.00007106166,"about_ca_system_score_gemma":0.000094188494,"threshold_uncertainty_score":0.8847395},"labels":[],"label_agreement":null},{"id":"W4366392615","doi":"10.3390/v15040996","title":"Cellular Immune Responses to SARS-CoV-2 in Exposed Seronegative Individuals","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Canadian Institutes of Health Research","keywords":"Immunity; Immunology; Immune system; Cellular immunity; Coronavirus; Antibody; Biology; Innate immune system; CD8; Virology; Humoral immunity; Peripheral blood mononuclear cell; Medicine; In vitro; Coronavirus disease 2019 (COVID-19); Internal medicine","score_opus":0.13178143466506548,"score_gpt":0.39714056253978247,"score_spread":0.265359127874717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366392615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966241,0.00042715328,0.000016922904,0.0006802516,0.00012796767,0.00074811076,0.000043439988,0.000253402,0.0010786443],"genre_scores_gemma":[0.9431979,0.0000099304625,0.00016104696,0.05612476,0.00011869163,0.00017076675,0.0000059691747,0.000057224082,0.00015371798],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976744,0.00022627061,0.0004130004,0.00044899437,0.0006269312,0.0006104224],"domain_scores_gemma":[0.99869287,0.000561456,0.000056273853,0.000546977,0.000095248775,0.000047193407],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008860536,0.00022600702,0.00044059235,0.0010469467,0.00008692861,0.000054253476,0.00028533748,0.00013886022,0.000023126597],"category_scores_gemma":[0.0012755909,0.00020313144,0.00009616245,0.0019530053,0.00010575396,0.00015274888,0.00025104804,0.00031520717,0.0029364484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008151515,0.00012773134,0.07588378,0.000050793926,0.000053744545,0.00041522412,0.0019865145,4.396522e-7,0.9170246,0.00006430283,0.0024395492,0.001138125],"study_design_scores_gemma":[0.0013331303,0.00035975865,0.049375758,0.00014363856,0.000015238063,0.0000047882295,0.00061134767,0.000017864671,0.8325302,0.0001630212,0.11526502,0.00018024101],"about_ca_topic_score_codex":0.00074146717,"about_ca_topic_score_gemma":0.0001007999,"teacher_disagreement_score":0.11282547,"about_ca_system_score_codex":0.0001317899,"about_ca_system_score_gemma":0.00031218532,"threshold_uncertainty_score":0.99783987},"labels":[],"label_agreement":null},{"id":"W4367055161","doi":"10.3390/v15051058","title":"Age at Natural Menopause in Women Living with HIV: A Cross-Sectional Study Comparing Self-Reported and Biochemical Data","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Menopause: Health Impacts and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; B.C. Women's Hospital & Health Centre; Simon Fraser University; Women's Health Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Menopause; Medicine; Confounding; Cross-sectional study; Human immunodeficiency virus (HIV); Psychosocial; Surgical Menopause; Demography; Gerontology; Gynecology; Internal medicine; Immunology","score_opus":0.11314495456015208,"score_gpt":0.3901675442431419,"score_spread":0.27702258968298976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367055161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99877465,0.00022723546,2.5377904e-7,0.00003713383,0.00007993964,0.0005641034,0.000029018202,0.00019388272,0.00009376986],"genre_scores_gemma":[0.9990949,0.00004253041,0.000110837835,0.00026976815,0.000065060754,0.00005044134,0.00009608442,0.00002763602,0.00024274482],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983872,0.000041889754,0.00034325567,0.00047099,0.00033131358,0.0004253293],"domain_scores_gemma":[0.9990116,0.00015948972,0.00009150108,0.00046567468,0.000028631095,0.00024313242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042756583,0.0001733905,0.00031646056,0.00017591915,0.00014453944,0.0000640927,0.0000975857,0.00004856473,0.000043933043],"category_scores_gemma":[0.00016161433,0.0001250856,0.0000028782872,0.00035294972,0.00005390048,0.00018738114,0.0003447925,0.00018652785,0.000039140486],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056348724,0.0005380139,0.987059,0.00010130678,0.00033385115,0.0008960282,0.001230525,0.0000020464465,0.00886412,9.3567144e-7,0.0003796216,0.000031057647],"study_design_scores_gemma":[0.0046244995,0.00096631056,0.9931288,0.00011489556,0.00007307685,0.00014185338,0.0001682528,0.00021147689,0.00014006947,0.0000026553134,0.00030740147,0.0001207598],"about_ca_topic_score_codex":0.0005802376,"about_ca_topic_score_gemma":0.00023127461,"teacher_disagreement_score":0.00872405,"about_ca_system_score_codex":0.0002752107,"about_ca_system_score_gemma":0.00009262106,"threshold_uncertainty_score":0.5100843},"labels":[],"label_agreement":null},{"id":"W4367624085","doi":"10.3390/v15051087","title":"First Report of Skunk Amdoparvovirus (Species Carnivore amdoparvovirus 4) in Europe in a Captive Striped Skunk (Mephitis mephitis)","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Stiftung Tierärztliche Hochschule Hannover; Deutsche Forschungsgemeinschaft","keywords":"Carnivore; Mink; Mustelidae; Zoology; Biology; American mink; Ecology","score_opus":0.04040864621753032,"score_gpt":0.3125087582017998,"score_spread":0.2721001119842695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367624085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946016,0.0015128928,0.000012065294,0.00019139319,0.0002048038,0.00069033884,0.0002776668,0.000067651796,0.0024415918],"genre_scores_gemma":[0.9938467,0.0037411686,0.00006597214,0.00023781,0.00022351343,0.00022775993,0.00020613904,0.00010422922,0.0013466803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964419,0.00033796034,0.00088640023,0.0009074134,0.00057298935,0.00085335766],"domain_scores_gemma":[0.99822825,0.00011728718,0.00027055823,0.00095597084,0.0002593555,0.00016858481],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008414324,0.00041185235,0.0005841819,0.00068757456,0.00009969776,0.00004537478,0.00062109483,0.0002665418,0.00015054546],"category_scores_gemma":[0.00080493215,0.00043301523,0.00014773509,0.0020875735,0.00039182752,0.000021478796,0.00038910247,0.00035736588,0.00016646243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002690762,0.0002884588,0.069852516,0.00010700071,0.00015120898,0.0029439349,0.00052014773,0.0024798652,0.91360795,0.00016315143,0.004985338,0.0022096534],"study_design_scores_gemma":[0.002877586,0.001971388,0.088005506,0.0001783933,0.000026216543,0.00011878786,0.00064323837,0.000119511475,0.83281416,0.00013655274,0.072275884,0.00083278085],"about_ca_topic_score_codex":0.0019083457,"about_ca_topic_score_gemma":0.021588605,"teacher_disagreement_score":0.08079381,"about_ca_system_score_codex":0.00009120507,"about_ca_system_score_gemma":0.0004275099,"threshold_uncertainty_score":0.9998122},"labels":[],"label_agreement":null},{"id":"W4377104710","doi":"10.3390/v15051189","title":"Temsavir Modulates HIV-1 Envelope Conformation by Decreasing Its Proteolytic Cleavage","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institutes of Health; Deutsche Forschungsgemeinschaft; Canada Foundation for Innovation; ViiV Healthcare; University of Pennsylvania","keywords":"Glycoprotein; Cleavage (geology); Biology; Viral entry; Protein subunit; Viral envelope; Cell biology; Virology; Entry inhibitor; Antibody; Glycosylation; Antibody-dependent cell-mediated cytotoxicity; Protein structure; Human immunodeficiency virus (HIV); Viral replication; Cytotoxicity; In vitro; Molecular biology; Biochemistry; Virus; Genetics; Gene","score_opus":0.03459987180713196,"score_gpt":0.28646684581631016,"score_spread":0.2518669740091782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377104710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99379027,0.0018266737,0.00004518514,0.00029053632,0.00013204255,0.00054462126,0.0003787276,0.00032761967,0.0026642962],"genre_scores_gemma":[0.9938203,0.0003531355,0.000028134224,0.00013817434,0.000014586524,0.00009435514,0.0008692497,0.000015453075,0.0046665934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991301,0.00009596669,0.00017778283,0.00016854693,0.000046652174,0.00038095802],"domain_scores_gemma":[0.99962395,0.00010679673,0.00004781655,0.00015296675,0.000031778836,0.000036662914],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015216168,0.00012438245,0.0001410837,0.0001208415,0.0002265725,0.00002369215,0.000120754936,0.000108362554,0.00041976382],"category_scores_gemma":[0.000121982914,0.000100544625,0.000035720444,0.00019652332,0.00007609162,0.00021751125,0.000063277126,0.0001265972,0.044276062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015285194,0.00012547497,0.0064464877,0.000046326688,0.00022649566,0.000026621097,0.00054448046,0.000008817442,0.82011795,0.00026649813,0.15493049,0.017107531],"study_design_scores_gemma":[0.001145782,0.00013377867,0.009954422,0.00004046509,0.000015741936,0.00002201377,0.00017668869,0.000033226093,0.77255255,0.00006167494,0.21569893,0.00016474682],"about_ca_topic_score_codex":0.000089960165,"about_ca_topic_score_gemma":0.000006080568,"teacher_disagreement_score":0.060768437,"about_ca_system_score_codex":0.00003884714,"about_ca_system_score_gemma":0.000051894964,"threshold_uncertainty_score":0.9564681},"labels":[],"label_agreement":null},{"id":"W4377108278","doi":"10.3390/v15051185","title":"Piperidine CD4-Mimetic Compounds Expose Vulnerable Env Epitopes Sensitizing HIV-1-Infected Cells to ADCC","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"SLAC National Accelerator Laboratory; Biological and Environmental Research; Basic Energy Sciences; National Institute of Allergy and Infectious Diseases; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institute on Drug Abuse; National Institute of Diabetes and Digestive and Kidney Diseases; Office of Science; National Institutes of Health; National Heart, Lung, and Blood Institute; U.S. Department of Energy","keywords":"Antibody-dependent cell-mediated cytotoxicity; Epitope; Piperidine; Antibody; Chemistry; Cytotoxicity; Virology; Human immunodeficiency virus (HIV); Biology; Biochemistry; Immunology; Stereochemistry; In vitro","score_opus":0.0326918693787647,"score_gpt":0.28633096237249406,"score_spread":0.25363909299372933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377108278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953514,0.0008778938,0.00005408106,0.00046460255,0.0005257613,0.00036333638,0.00034381522,0.00044094404,0.0015781713],"genre_scores_gemma":[0.99222165,0.00022039317,0.00014847277,0.00040714035,0.000072131705,0.00006890853,0.00035822642,0.000033443346,0.0064696125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825794,0.00034358999,0.00023308911,0.0003811218,0.0000672222,0.0007170692],"domain_scores_gemma":[0.99894375,0.0004915136,0.000039642444,0.00036366834,0.00006511087,0.00009632737],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026896253,0.00022530211,0.00031969708,0.0002990273,0.00043933673,0.0000493874,0.00017260207,0.00012713016,0.0009885246],"category_scores_gemma":[0.00014653825,0.00019063505,0.00008490541,0.0005017596,0.000111574256,0.00009545954,0.0001801647,0.00026780867,0.058070485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011803742,0.00013459005,0.0016135103,0.000014796097,0.00016973384,0.00016083474,0.00036690282,0.000045284836,0.9278492,0.000065231165,0.06612282,0.0033390576],"study_design_scores_gemma":[0.00090870087,0.00029365954,0.00328875,0.000031836888,0.000025142908,0.000031137195,0.00018789835,0.0000061424403,0.76508266,0.000021640626,0.22993234,0.00019007531],"about_ca_topic_score_codex":0.0004555237,"about_ca_topic_score_gemma":0.0000798255,"teacher_disagreement_score":0.16380952,"about_ca_system_score_codex":0.000061015886,"about_ca_system_score_gemma":0.0000640965,"threshold_uncertainty_score":0.9999247},"labels":[],"label_agreement":null},{"id":"W4377293908","doi":"10.3390/v15051207","title":"Porcine Circovirus Modulates Swine Influenza Virus Replication in Pig Tracheal Epithelial Cells and Porcine Alveolar Macrophages","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Université de Montréal","keywords":"Porcine circovirus; Biology; Virology; Virus; Viral replication; Pathogenesis; Circovirus; Influenza A virus; Gene expression; Molecular biology; Gene; Immunology; Genetics","score_opus":0.04937550411310012,"score_gpt":0.28399127514563927,"score_spread":0.23461577103253914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377293908","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99738556,0.0009279218,0.000002525898,0.0005449914,0.00011628532,0.00029743862,0.00023753822,0.000303188,0.00018455199],"genre_scores_gemma":[0.99756926,0.0010679008,0.000040427574,0.0007957664,0.00030283927,0.000056023036,0.00002916862,0.0000044335457,0.00013416806],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983475,0.000086247615,0.00040309984,0.00057449203,0.00019514651,0.00039348504],"domain_scores_gemma":[0.9993356,0.00025024638,0.00012213652,0.00014370648,0.000057355097,0.000090968955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042858676,0.00023713172,0.0003051581,0.00008298441,0.0003152633,0.000059015827,0.0001694946,0.00012515354,0.00015755952],"category_scores_gemma":[0.00016403644,0.000112959155,0.00006493327,0.00096751313,0.00013692812,0.0002569082,0.00016385301,0.00017660868,0.0002924154],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007051497,0.00008002967,0.065398976,0.000011060107,0.000017106333,0.000013590284,0.000112838854,0.000043165557,0.9125757,0.00011181131,0.0004558362,0.021109365],"study_design_scores_gemma":[0.0002796541,0.00027097057,0.77578557,0.000015393112,0.000017298193,0.000006237989,0.00017499882,0.00014520079,0.20478351,0.0005499953,0.017735295,0.00023584152],"about_ca_topic_score_codex":0.0035982043,"about_ca_topic_score_gemma":0.0015795078,"teacher_disagreement_score":0.71038663,"about_ca_system_score_codex":0.000039768696,"about_ca_system_score_gemma":0.00000632426,"threshold_uncertainty_score":0.5439433},"labels":[],"label_agreement":null},{"id":"W4377293911","doi":"10.3390/v15051209","title":"Area Wide Monitoring of Plant and Honey Bee (Apis mellifera) Viruses in Blueberry (Vaccinium corymbosum) Agroecosystems Facilitated by Honey Bee Pollination","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Brock University; University of Waterloo; Canadian Food Inspection Agency; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","keywords":"Biology; Vaccinium; Honey bee; Pollination; Plant virus; Cucumber mosaic virus; Deformed wing virus; Pollinator; Botany; Virus; Virology; Pollen","score_opus":0.06719951616756288,"score_gpt":0.2828910244401277,"score_spread":0.21569150827256484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377293911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971433,0.0010703969,0.0000010756127,0.00019595904,0.00015774205,0.0002903581,0.0009968795,0.00010169521,0.00004256905],"genre_scores_gemma":[0.99830455,0.0012572192,0.0000073547226,0.000064476524,0.0001183054,0.000033961616,0.00009997223,0.0000029789264,0.00011118574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982885,0.00017083724,0.00040072636,0.00032658246,0.00039126351,0.00042209274],"domain_scores_gemma":[0.998526,0.0011089636,0.000109621535,0.000052944273,0.000085452295,0.00011705228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005029377,0.00018810105,0.00031763007,0.0001005059,0.00015810142,0.00007175446,0.00021359845,0.00014800545,0.00010268971],"category_scores_gemma":[0.00026313335,0.00009079293,0.000052559408,0.0007621187,0.000063402884,0.00021715545,0.000091135094,0.00017351331,0.000063298394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077341305,0.00004480603,0.22688048,0.00004585603,0.000015168072,0.00001010081,0.0002610684,0.000011967232,0.76970154,0.000018832581,0.0013674352,0.0015653813],"study_design_scores_gemma":[0.00039474995,0.00035992076,0.2770631,0.00017635492,0.000011898768,0.000004528046,0.0014105807,0.00027127893,0.7173139,0.00021131212,0.0024662607,0.00031613058],"about_ca_topic_score_codex":0.007480728,"about_ca_topic_score_gemma":0.0021738983,"teacher_disagreement_score":0.05238768,"about_ca_system_score_codex":0.00003775958,"about_ca_system_score_gemma":0.00001747435,"threshold_uncertainty_score":0.9991285},"labels":[],"label_agreement":null},{"id":"W4377942236","doi":"10.3390/v15061226","title":"Machine Learning Algorithms Associate Case Numbers with SARS-CoV-2 Variants Rather Than with Impactful Mutations","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Alliance de recherche numérique du Canada; University of Ottawa","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Pandemic; Computer science; Machine learning; 2019-20 coronavirus outbreak; Artificial intelligence; Artificial neural network; Mutation; Computational biology; Biology; Genetics; Gene; Virology; Medicine","score_opus":0.06891409766135033,"score_gpt":0.3748324888391614,"score_spread":0.3059183911778111,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377942236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99563676,0.00009986163,0.00025017062,0.00026943348,0.000058014695,0.0004204062,0.000057464746,0.00059401576,0.00261387],"genre_scores_gemma":[0.9869904,0.000008144148,0.00041216778,0.011923873,0.0001514202,0.00007342726,0.000014927456,0.00014517487,0.00028046107],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806577,0.00013100411,0.00021247464,0.00039916497,0.00058708317,0.000604491],"domain_scores_gemma":[0.9991038,0.00024414845,0.00010790279,0.00031868505,0.00015714421,0.000068312096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004193147,0.00026222487,0.00035298587,0.00030982177,0.00030389888,0.00010178385,0.00011685788,0.00010516125,0.000028352426],"category_scores_gemma":[0.00024998895,0.00018067023,0.00007763846,0.0012338,0.00014231975,0.00022514313,0.000056789697,0.00049576885,0.0006834705],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020110977,0.0006192229,0.76028836,0.00018522902,0.0018393972,0.047860447,0.0070448667,0.00007558259,0.16834748,0.000115596275,0.0019724737,0.00964025],"study_design_scores_gemma":[0.02523006,0.0068179597,0.075724125,0.0010323253,0.0014369739,0.014606834,0.008204306,0.027926082,0.62984776,0.0004096166,0.20629725,0.0024667159],"about_ca_topic_score_codex":0.0073164315,"about_ca_topic_score_gemma":0.0017808843,"teacher_disagreement_score":0.68456423,"about_ca_system_score_codex":0.00013035043,"about_ca_system_score_gemma":0.00035843934,"threshold_uncertainty_score":0.9992939},"labels":[],"label_agreement":null},{"id":"W4378224504","doi":"10.3390/v15061242","title":"California Serogroup Viruses in a Changing Canadian Arctic: A Review","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; ArcticNet; Weston Family Foundation; University of Saskatchewan","keywords":"Enzootic; Arbovirus; Biology; Vector (molecular biology); Transmission (telecommunications); Arctic; Ecology; Geography; Virology; Virus","score_opus":0.18610981448330877,"score_gpt":0.4161302711973229,"score_spread":0.2300204567140141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378224504","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000020202997,0.99703324,0.0000012828326,0.00009951447,0.00033206143,0.0015279432,0.0002945549,0.00017021011,0.00052102143],"genre_scores_gemma":[0.00001115203,0.9942241,0.000024273595,0.0041722846,0.00035365802,0.00048057077,0.00012256949,0.00014112565,0.00047031965],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99776226,0.00013499169,0.00075654377,0.0004527086,0.00020030841,0.00069320446],"domain_scores_gemma":[0.9987671,0.00012288442,0.0001862434,0.0004885874,0.000059731457,0.00037545682],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048168132,0.00046306232,0.00206199,0.002306055,0.000114597344,0.000037044912,0.00014930031,0.00028368708,0.00052695756],"category_scores_gemma":[0.000480897,0.00035664352,0.000503102,0.0034385603,0.00004583878,0.00007639831,0.000067917244,0.0006095423,0.0034271367],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000044269464,0.000093101735,0.00080076966,0.22516717,0.00040988837,0.00072274456,0.000044308574,2.7667565e-7,7.0017165e-7,0.00019672661,0.0088390745,0.7637208],"study_design_scores_gemma":[0.00009739525,0.0000506522,0.000019194347,0.19189572,0.00085319305,0.000129905,0.000009127206,0.0000012890175,3.1140274e-7,0.0000052794007,0.80667377,0.00026416167],"about_ca_topic_score_codex":0.12927397,"about_ca_topic_score_gemma":0.20457903,"teacher_disagreement_score":0.7978347,"about_ca_system_score_codex":0.00078062946,"about_ca_system_score_gemma":0.0010728863,"threshold_uncertainty_score":0.99988854},"labels":[],"label_agreement":null},{"id":"W4378515529","doi":"10.3390/v15051135","title":"Evolution of Bipartite and Segmented Viruses from Monopartite Viruses","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Helper virus; Biology; Virus; RNA; Bipartite graph; Virology; Viral evolution; Gene; Transmissibility (structural dynamics); Viral replication; Genetics; Physics; Computer science","score_opus":0.021246821145681296,"score_gpt":0.27880353666368685,"score_spread":0.2575567155180056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378515529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99598104,0.0020177916,0.0011861399,0.000035742105,0.00015613316,0.00011723752,0.00028095426,0.00006308136,0.00016186087],"genre_scores_gemma":[0.9978327,0.00081856217,0.00040461597,0.0004993072,0.00012517603,0.000017735743,0.00008602199,0.000024485758,0.00019136509],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901545,0.00005912584,0.0002589761,0.00031377634,0.00013749568,0.00021514889],"domain_scores_gemma":[0.999432,0.000026914306,0.00009738574,0.0003016682,0.00006012667,0.00008190619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011031442,0.00014873713,0.00015723598,0.00009808513,0.000071975635,0.000018556384,0.00011915333,0.000118101685,0.00003529501],"category_scores_gemma":[0.00009775496,0.00014734695,0.000055158194,0.00023038256,0.00014791373,0.000008983912,0.00015393319,0.000048918548,0.000082623956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000771751,0.00003824472,0.08426071,0.000011633381,0.000053570624,0.0000010964126,0.000039227732,0.00053906214,0.91139954,0.00022049795,0.0029993579,0.00035990457],"study_design_scores_gemma":[0.0009746587,0.0003557526,0.1670445,0.00004504426,0.00006828916,0.000003164501,0.0002624276,0.0036425497,0.7520512,0.000739144,0.0744168,0.00039648748],"about_ca_topic_score_codex":0.0003525179,"about_ca_topic_score_gemma":0.00030175952,"teacher_disagreement_score":0.15934834,"about_ca_system_score_codex":0.000012976921,"about_ca_system_score_gemma":0.0000487511,"threshold_uncertainty_score":0.6008634},"labels":[],"label_agreement":null},{"id":"W4378515792","doi":"10.3390/v15051116","title":"Functional Profiling and Evolutionary Analysis of a Marine Microalgal Virus Pangenome","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"University of Waterloo; University of Toronto; Natural Sciences and Engineering Research Council of Canada; Government of Canada; Phycological Society of America","keywords":"Biology; Gene; Transcriptome; Computational biology; Genome; Host (biology); Genetics; Function (biology); Clade; Evolutionary biology; Gene expression; Phylogenetics","score_opus":0.025776762104717358,"score_gpt":0.2527077294853428,"score_spread":0.22693096738062546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378515792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99872893,0.000039108094,0.000035460893,0.00004628275,0.00007818663,0.000055633293,0.00013209601,0.0000373285,0.00084695587],"genre_scores_gemma":[0.9981316,0.00009945618,0.0005718083,0.00014487498,0.000027958089,0.00001027519,0.000090506604,0.0000071154177,0.0009164233],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995118,0.000014966323,0.00012877361,0.00015833719,0.00007434133,0.000111812886],"domain_scores_gemma":[0.9997857,0.00003507008,0.000045617846,0.0000932989,0.0000062610325,0.00003405869],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00005642184,0.00006285027,0.00010611983,0.00012895103,0.00007645403,0.00001054752,0.000047402384,0.000027030963,0.00516134],"category_scores_gemma":[0.000010890255,0.000058629295,0.00005761189,0.0006856901,0.00008813124,0.00013508544,0.00019168395,0.000043056993,0.00033736048],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001843404,0.000030023384,0.0682861,0.000003107231,0.00012335577,0.0000020048885,0.000040817235,0.00042977813,0.92847145,0.000021477954,0.0011683657,0.0014050993],"study_design_scores_gemma":[0.00006597999,0.000017598733,0.9715372,0.000001986831,0.00013302678,0.000003376885,0.00003394072,0.00036730664,0.02060153,0.000036047553,0.0071373647,0.0000646509],"about_ca_topic_score_codex":0.0014168265,"about_ca_topic_score_gemma":0.00036060353,"teacher_disagreement_score":0.90786994,"about_ca_system_score_codex":0.00003519748,"about_ca_system_score_gemma":0.0000048232637,"threshold_uncertainty_score":0.9957481},"labels":[],"label_agreement":null},{"id":"W4378902943","doi":"10.3390/v15061294","title":"Combination of Oncolytic Measles Virus and Ursolic Acid Synergistically Induces Oncolysis of Hepatocellular Carcinoma Cells","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Taipei Medical University Hospital; Taipei Medical University; Ministry of Science and Technology, Taiwan","keywords":"Oncolytic virus; Hepatocellular carcinoma; Virotherapy; Measles virus; Hepatitis B virus; Cancer research; Apoptosis; Ursolic acid; Hepatitis C virus; Virology; Liver cancer; Cancer cell; Combination therapy; Cancer; Virus; Medicine; Biology; Measles; Vaccination; Pharmacology; Internal medicine","score_opus":0.037171747269879575,"score_gpt":0.3022666456216927,"score_spread":0.2650948983518131,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378902943","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99827,0.0011297096,0.000043924083,0.000039039318,0.000053410968,0.00021023968,0.00008159977,0.000016881595,0.00015520302],"genre_scores_gemma":[0.99880797,0.0008158944,0.00007848886,0.00006979783,0.00004932533,0.000026287003,0.00004021651,0.00002795649,0.000084094965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987371,0.00013524987,0.00030412458,0.0002886604,0.00030288036,0.00023197754],"domain_scores_gemma":[0.99920833,0.00006351825,0.00013008389,0.00034917294,0.00015945364,0.000089427675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035084513,0.0001488688,0.00026425903,0.00018610223,0.000054311087,0.000013843463,0.00022341014,0.00014373643,0.0000204814],"category_scores_gemma":[0.00013725049,0.00014384583,0.00007861594,0.00035164412,0.00024697176,0.0000065872405,0.00014564717,0.00007457724,0.000015602049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044687133,0.00027584573,0.0030784456,0.00007642553,0.000088451336,0.0000060256975,0.00007639891,0.000017182037,0.9933246,0.00008518025,0.00021379623,0.002310811],"study_design_scores_gemma":[0.001017407,0.0017643064,0.0021862113,0.000019614972,0.00003804638,0.0000013836734,0.00007759961,0.0003573841,0.99377775,0.00012537,0.0004971398,0.00013777966],"about_ca_topic_score_codex":0.0001802882,"about_ca_topic_score_gemma":0.00008139581,"teacher_disagreement_score":0.0021730314,"about_ca_system_score_codex":0.000016184047,"about_ca_system_score_gemma":0.00014892199,"threshold_uncertainty_score":0.5865863},"labels":[],"label_agreement":null},{"id":"W4378904440","doi":"10.3390/v15061295","title":"Infectious Bursal Disease Virus Assembly Causes Endoplasmic Reticulum Stress and Lipid Droplet Accumulation","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Universidad Nacional de Cuyo; Agencia Nacional de Promoción Científica y Tecnológica; University of Toronto; Consejo Nacional de Investigaciones Científicas y Técnicas","keywords":"Endoplasmic reticulum; Infectious bursal disease; Endosome; Golgi apparatus; Cell biology; Biology; Secretory pathway; Host factor; Virus; Endocytic cycle; Lipid droplet; Unfolded protein response; GTPase; Virology; Cell; Endocytosis; Virulence; Biochemistry","score_opus":0.04230163613593328,"score_gpt":0.3344956703546113,"score_spread":0.292194034218678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378904440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976246,0.00045781105,0.000022233897,0.00041802792,0.00030321526,0.00029825006,0.0002000179,0.00049588596,0.00017996345],"genre_scores_gemma":[0.9970447,0.0006631308,0.000009247518,0.0014537311,0.00034449785,0.00004810842,0.00019432793,0.00003332981,0.00020893758],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988748,0.00008378236,0.00020455725,0.0003335462,0.00020125907,0.00030207392],"domain_scores_gemma":[0.99916476,0.00016758947,0.00006575774,0.000260602,0.000046880472,0.0002944074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008123866,0.00019145734,0.00024199972,0.00020994087,0.00017513502,0.000039498496,0.000054948403,0.00010505756,0.00012181036],"category_scores_gemma":[0.00049448694,0.00016862694,0.00007086412,0.00027879557,0.00015135364,0.00022359485,0.000077114826,0.00014766656,0.00036162906],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006213686,0.00025975137,0.94302803,0.00021054376,0.00011857928,0.0003376749,0.00011349195,0.00012185722,0.051192887,0.00042652347,0.002666378,0.0009028981],"study_design_scores_gemma":[0.0012891327,0.0002864405,0.9757828,0.00011830958,0.00034458443,0.00001763145,0.000055978548,0.0008206775,0.016939461,0.00023833309,0.0038961645,0.00021044575],"about_ca_topic_score_codex":0.0001655724,"about_ca_topic_score_gemma":0.00012451371,"teacher_disagreement_score":0.034253426,"about_ca_system_score_codex":0.000020403313,"about_ca_system_score_gemma":0.000085733176,"threshold_uncertainty_score":0.68764067},"labels":[],"label_agreement":null},{"id":"W4378904483","doi":"10.3390/v15061281","title":"Generation of a SARS-CoV-2 Reverse Genetics System and Novel Human Lung Cell Lines That Exhibit High Virus-Induced Cytopathology","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"Canadian Institutes of Health Research; National Cancer Institute; Innovation Saskatchewan; Glaucoma Research Foundation","keywords":"Virology; Virus; Biology; Cell culture; Cytopathology; HEK 293 cells; Reverse genetics; CRISPR; Viral replication; A549 cell; Genetics; Gene; Genome","score_opus":0.21018888406999434,"score_gpt":0.391050238881669,"score_spread":0.18086135481167467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378904483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820817,0.0004365156,0.0001206838,0.00006024203,0.0002247123,0.0004662716,0.000050795654,0.00015349225,0.0002791047],"genre_scores_gemma":[0.9921547,0.00002623132,0.00021628792,0.0070746997,0.00039565333,0.000044364868,0.000012392459,0.000047760375,0.000027895441],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984374,0.00008126446,0.00036615462,0.00041012256,0.00037539736,0.00032965656],"domain_scores_gemma":[0.9991495,0.000087892964,0.00013460511,0.0004414106,0.00015314395,0.00003347064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035629908,0.0002047872,0.00042332837,0.000376751,0.00012424614,0.00003201757,0.00013219417,0.0002006156,0.0000030876668],"category_scores_gemma":[0.000075109936,0.00018271797,0.00007365747,0.0003992167,0.00010517124,0.00008627769,0.00014508283,0.00018017762,0.00006126129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007935293,0.00009508567,0.021846669,0.0005221293,0.000030435158,0.00011461509,0.00024443615,0.0000016392502,0.9756184,0.00023509523,0.0010263382,0.00018580949],"study_design_scores_gemma":[0.0014633915,0.00028902557,0.0057175388,0.00011775629,0.000092592716,0.00003543942,0.0001873667,0.0015832621,0.9859411,0.000010129164,0.0044006,0.0001617639],"about_ca_topic_score_codex":0.00083818333,"about_ca_topic_score_gemma":0.00020199506,"teacher_disagreement_score":0.01612913,"about_ca_system_score_codex":0.00007261471,"about_ca_system_score_gemma":0.00011957882,"threshold_uncertainty_score":0.7451022},"labels":[],"label_agreement":null},{"id":"W4379054365","doi":"10.3390/v15061310","title":"Congenital SARS-CoV-2 Infection in Two Neonates with Confirmation by Viral Culture of the Placenta in One Case","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 Impact on Reproduction","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Alberta; University of Calgary; Red Deer Regional Hospital; Alberta Health Services","funders":"","keywords":"Umbilical cord; Placenta; Immunostaining; Cord blood; Pathology; Medicine; Gestational age; Gestation; Pregnancy; Andrology; Fetus; Virology; Biology; Immunology; Immunohistochemistry","score_opus":0.05711164150414217,"score_gpt":0.363126164550242,"score_spread":0.30601452304609983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379054365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984824,0.000069040245,0.0000089632495,0.0006409374,0.00010160997,0.0004912899,0.000024255052,0.000062303574,0.000119212455],"genre_scores_gemma":[0.99916726,0.00003635542,0.0000129515165,0.0006295169,0.000041898667,0.000019461053,0.000021274502,0.000012464405,0.00005882182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992605,0.000066613415,0.00020103528,0.0001644006,0.00017768482,0.00012977156],"domain_scores_gemma":[0.999607,0.000044567845,0.00008780389,0.00019512733,0.00004744941,0.00001799757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017565953,0.00009458068,0.00015500122,0.00017028497,0.000029179912,0.000011105024,0.000030295365,0.000044151388,0.0000118175085],"category_scores_gemma":[0.00022872037,0.000065557004,0.000025302657,0.0006812484,0.00006790787,0.00018683384,0.000023652301,0.00016231196,0.000016754098],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040405523,0.00016779786,0.37039068,0.00007588714,0.000029319735,0.000072573835,0.001888741,0.000115845185,0.6244334,0.00003194649,0.0015190732,0.000870685],"study_design_scores_gemma":[0.0037354052,0.00026045158,0.17173791,0.00016800701,0.00005644333,0.0003713085,0.0005630692,0.0004597426,0.8199663,0.000059399255,0.0024960577,0.00012591679],"about_ca_topic_score_codex":0.015911186,"about_ca_topic_score_gemma":0.0075830035,"teacher_disagreement_score":0.19865276,"about_ca_system_score_codex":0.00012547163,"about_ca_system_score_gemma":0.00006349544,"threshold_uncertainty_score":0.99064195},"labels":[],"label_agreement":null},{"id":"W4379056774","doi":"10.3390/v15061302","title":"Henipavirus Matrix Protein Employs a Non-Classical Nuclear Localization Signal Binding Mechanism","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service; National Institutes of Health","keywords":"NLS; Nuclear localization sequence; Nuclear transport; Biology; Cell biology; Hendra Virus; Immunoprecipitation; Nuclear pore; Importin; Ebolavirus; Virology; Molecular biology; Cell nucleus; Virus; Genetics; Nucleus; Gene","score_opus":0.036941101649866255,"score_gpt":0.3192189331348302,"score_spread":0.28227783148496394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379056774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99664146,0.000048612794,0.0010962592,0.0006021587,0.00011534104,0.000517693,0.000040578037,0.0005934348,0.00034447928],"genre_scores_gemma":[0.9968291,0.000023692399,0.00017571788,0.001462861,0.00022628799,0.000055663953,0.000045031775,0.00005508414,0.001126539],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998827,0.000061707346,0.00022410917,0.000296984,0.00025619907,0.00033400956],"domain_scores_gemma":[0.9994975,0.000035008532,0.00005895012,0.00019873139,0.00003499912,0.00017484464],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012913287,0.00016698746,0.000248348,0.00022899805,0.00020924683,0.00002783592,0.000094902236,0.00017533307,0.00072695874],"category_scores_gemma":[0.000097985314,0.00014452284,0.00010310168,0.00045810707,0.00009255619,0.00014545831,0.00007770286,0.00017712277,0.004681324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011522557,0.00040722886,0.007714999,0.00022279655,0.00016165663,0.00048532413,0.0002912991,0.00007105811,0.9579926,0.014912544,0.014865208,0.0017230328],"study_design_scores_gemma":[0.016899763,0.008823147,0.09143355,0.0021825312,0.0019132069,0.00025167954,0.0017190691,0.06360139,0.65035874,0.026912082,0.13288493,0.0030199122],"about_ca_topic_score_codex":0.000028699902,"about_ca_topic_score_gemma":0.000004063608,"teacher_disagreement_score":0.30763385,"about_ca_system_score_codex":0.000036877827,"about_ca_system_score_gemma":0.00006782075,"threshold_uncertainty_score":0.99609363},"labels":[],"label_agreement":null},{"id":"W4379473103","doi":"10.3390/v15061323","title":"Correction: Luo, M. Natural Immunity against HIV-1: Progression of Understanding after Association Studies. Viruses 2022, 14, 1243","year":2023,"lang":"en","type":"erratum","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Human immunodeficiency virus (HIV); Immunity; Virology; Association (psychology); Immunology; Biology; Medicine; Psychology; Immune system; Psychotherapist","score_opus":0.06185789630433678,"score_gpt":0.34253307286313284,"score_spread":0.28067517655879604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379473103","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.053133354,0.4996314,0.0000436971,0.001234177,0.40405023,0.004031344,0.008557741,0.0017164206,0.027601652],"genre_scores_gemma":[0.18007617,0.05200741,0.000028066766,0.00071775186,0.0012865836,0.00077667343,0.008210322,0.000254328,0.7566427],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99725026,0.00067630754,0.0005812495,0.000508994,0.00027959625,0.00070361956],"domain_scores_gemma":[0.9974699,0.0010924693,0.000608836,0.00046523314,0.0003200996,0.000043432276],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005730368,0.00047475047,0.000849756,0.0004663362,0.0005056625,0.000044858138,0.0003072095,0.0009911974,0.00042633736],"category_scores_gemma":[0.001562463,0.00038147013,0.00027919418,0.0004929282,0.00032165638,0.00018685426,0.00038336814,0.0019474638,0.0022058922],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047446907,0.00025574936,0.0044830507,0.00018440525,0.002802919,0.000055372657,0.0005036388,0.0000010033569,0.0037473857,0.000010937055,0.98529696,0.0021840958],"study_design_scores_gemma":[0.0023765161,0.00068467174,0.0051701204,0.0023865264,0.00044612703,0.0000127862895,0.0026605262,0.0000040963923,0.016348971,0.000114505994,0.9690618,0.0007333716],"about_ca_topic_score_codex":0.00015491778,"about_ca_topic_score_gemma":0.00063211366,"teacher_disagreement_score":0.72904104,"about_ca_system_score_codex":0.0016598228,"about_ca_system_score_gemma":0.00037177015,"threshold_uncertainty_score":0.99986374},"labels":[],"label_agreement":null},{"id":"W4379534745","doi":"10.3390/v15061327","title":"Explainable COVID-19 Detection Based on Chest X-rays Using an End-to-End RegNet Architecture","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 diagnosis using AI","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut du Savoir Montfort; Université de Moncton","funders":"Natural Sciences and Engineering Research Council of Canada; New Brunswick Innovation Foundation","keywords":"Coronavirus disease 2019 (COVID-19); Convolutional neural network; Pneumonia; Artificial intelligence; Deep learning; Receiver operating characteristic; Generalization; Medicine; Sensitivity (control systems); Computer science; Hyperparameter; Pattern recognition (psychology); Radiology; Internal medicine; Mathematics; Disease","score_opus":0.10842073247232907,"score_gpt":0.3704492020795683,"score_spread":0.2620284696072392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379534745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9674978,0.00004853146,0.009264318,0.020115517,0.00050162355,0.0009536038,0.00007820167,0.001386508,0.00015388458],"genre_scores_gemma":[0.8788297,0.000011088056,0.0014364765,0.11887185,0.00048846944,0.00009435319,0.00004785118,0.00009493779,0.00012525465],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979022,0.00016297396,0.00026352785,0.00063993706,0.00052507914,0.0005062874],"domain_scores_gemma":[0.9977547,0.0007797537,0.00008805686,0.0007458024,0.00006217714,0.00056950346],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00054793165,0.00027720205,0.00033248242,0.0009261438,0.0003430233,0.00007590722,0.00015940111,0.0001560402,0.00035708005],"category_scores_gemma":[0.0020919547,0.00026369875,0.00009673666,0.0013362358,0.00007820308,0.00011921252,0.00006420278,0.00030265647,0.0002551515],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001702019,0.0009945233,0.0066488814,0.0010417455,0.000089515306,0.0010230992,0.0026791433,0.3175911,0.61724067,0.000050643765,0.020906415,0.030032273],"study_design_scores_gemma":[0.0023851497,0.001715601,0.009731979,0.00045391702,0.00018269854,0.000044365996,0.00039012497,0.025942026,0.18177237,0.00015889361,0.77665406,0.000568835],"about_ca_topic_score_codex":0.0023910739,"about_ca_topic_score_gemma":0.0006135172,"teacher_disagreement_score":0.7557476,"about_ca_system_score_codex":0.0006192262,"about_ca_system_score_gemma":0.0005288584,"threshold_uncertainty_score":0.9999815},"labels":[],"label_agreement":null},{"id":"W4380143017","doi":"10.3390/v15061274","title":"A Recent SARS-CoV-2 Infection Enhances Antibody-Dependent Cellular Cytotoxicity against Several Omicron Subvariants following a Fourth mRNA Vaccine Dose","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Institut National de Santé Publique du Québec; Héma-Québec; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Fondation du CHUM","keywords":"Antibody-dependent cell-mediated cytotoxicity; Neutralization; Antibody; Context (archaeology); Virology; Biology; Neutralizing antibody; Effector; Cytotoxicity; Immunology; Genetics; In vitro; Monoclonal antibody","score_opus":0.06144719294139244,"score_gpt":0.3695126516279237,"score_spread":0.30806545868653123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380143017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99555606,0.0005755456,0.00025149665,0.00015967691,0.0010063265,0.0008565408,0.000023278431,0.00053305697,0.0010380505],"genre_scores_gemma":[0.9733397,0.0004645416,0.00008492267,0.025268754,0.0006253445,0.00007125405,0.000027687183,0.000081492275,0.000036302514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99687916,0.00018616546,0.0005400015,0.0007187423,0.000826967,0.0008489908],"domain_scores_gemma":[0.9988801,0.00014640944,0.00014835711,0.00057350984,0.00017335272,0.000078291356],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008661188,0.00038677614,0.0006016116,0.000587452,0.00028554426,0.0001318472,0.00023138945,0.00022886899,0.000020712434],"category_scores_gemma":[0.00061567896,0.0003449059,0.00028439032,0.0012300713,0.000044034445,0.000319423,0.00023366568,0.0004956855,0.00088156445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006641324,0.00030057735,0.073792204,0.00011883748,0.00022511485,0.0006349529,0.00021073218,0.0000044715243,0.9191664,0.000013214048,0.0012308693,0.0036385104],"study_design_scores_gemma":[0.0029831505,0.00034749866,0.014667343,0.00021409016,0.00008365216,0.0000143194675,0.00005077221,0.00070516113,0.88462734,0.00006843314,0.09591251,0.00032572888],"about_ca_topic_score_codex":0.0012626591,"about_ca_topic_score_gemma":0.00047162746,"teacher_disagreement_score":0.09468164,"about_ca_system_score_codex":0.00032887308,"about_ca_system_score_gemma":0.0003563295,"threshold_uncertainty_score":0.9999003},"labels":[],"label_agreement":null},{"id":"W4380264173","doi":"10.3390/v15061352","title":"Novel Approach for Identification of Basic and Effective Reproduction Numbers Illustrated with COVID-19","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Concordia University of Edmonton","funders":"Concordia University; Concordia University of Edmonton","keywords":"Coronavirus disease 2019 (COVID-19); Identification (biology); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Basic reproduction number; Epidemic model; Reproduction; 2019-20 coronavirus outbreak; Ordinary differential equation; Statistics; Ordinary least squares; Infectious disease (medical specialty); Mathematics; Computer science; Applied mathematics; Econometrics; Mathematical optimization; Biology; Differential equation; Demography; Medicine; Virology; Outbreak; Ecology; Disease","score_opus":0.31882760282452866,"score_gpt":0.43681681455419796,"score_spread":0.11798921172966931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380264173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.696241,0.00006852417,0.30036262,0.0008446014,0.000070427704,0.0018546181,0.0001000654,0.0003574153,0.00010070085],"genre_scores_gemma":[0.9906116,0.00004452917,0.008287143,0.00031476002,0.00006464291,0.0004994095,0.000021550102,0.000020350755,0.00013601073],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99898434,0.00007575303,0.00028076392,0.00040481205,0.000112582435,0.00014175013],"domain_scores_gemma":[0.99673146,0.0026612652,0.00023052143,0.00023787608,0.0000923787,0.000046515826],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0012819547,0.000112091,0.0002663843,0.000070937494,0.00012955816,0.000011055609,0.00006385746,0.00005963024,0.0000032753837],"category_scores_gemma":[0.012379536,0.00008030859,0.000035331526,0.00041518902,0.00018204516,0.00007866068,0.00004224155,0.000055109515,0.0000028041554],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043108063,0.0023632802,0.15362366,0.016484851,0.0024140403,0.000007767626,0.013483915,0.022867884,0.5232381,0.16586924,0.0801196,0.015216853],"study_design_scores_gemma":[0.012743575,0.0028644938,0.4198642,0.0003258507,0.0017475914,0.00007002463,0.0143936975,0.028346227,0.15074356,0.33837676,0.027938165,0.002585829],"about_ca_topic_score_codex":0.00021180563,"about_ca_topic_score_gemma":0.000026618778,"teacher_disagreement_score":0.37249455,"about_ca_system_score_codex":0.00006441805,"about_ca_system_score_gemma":0.000028032227,"threshold_uncertainty_score":0.9959396},"labels":[],"label_agreement":null},{"id":"W4381662074","doi":"10.3390/v15071406","title":"Host Cell Response to Rotavirus Infection with Emphasis on Virus–Glycan Interactions, Cholesterol Metabolism, and Innate Immunity","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"International Development Research Centre; Wellcome Trust; Ohio State University","keywords":"Biology; Immune system; Rotavirus; Transcriptome; Signal transduction; Innate immune system; Gene; Virology; Virus; Genetics; Gene expression","score_opus":0.04583220009623792,"score_gpt":0.3562490326177908,"score_spread":0.3104168325215529,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381662074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966763,0.00006678563,0.00005036145,0.0021811386,0.0001402396,0.00043198303,0.00008063561,0.0001815779,0.00019092977],"genre_scores_gemma":[0.99370927,0.000744237,0.0001451225,0.004578393,0.00010601755,0.00012425611,0.000021302734,0.000036372367,0.0005350401],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99820113,0.00058227696,0.0002521686,0.0003202269,0.0002114779,0.00043273336],"domain_scores_gemma":[0.99905705,0.00014032028,0.00006350776,0.00034422425,0.00007222643,0.00032265915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070525997,0.00019343094,0.00035288092,0.0005883566,0.00017144279,0.000048432757,0.000076424396,0.00006177219,0.00007860924],"category_scores_gemma":[0.00062939705,0.0001520683,0.00005273858,0.0005450699,0.00010289136,0.00020046426,0.00011483923,0.0003872074,0.00047079116],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.028673667,0.00034216532,0.102738135,0.00006797124,0.00013121225,0.00013864996,0.0004067574,0.000041598414,0.84658873,0.000011823876,0.007003201,0.013856092],"study_design_scores_gemma":[0.0016215305,0.00243619,0.80703413,0.00013443272,0.000034351062,0.00007204982,0.0001047768,0.00002771337,0.042222634,0.0000054212564,0.1461853,0.00012148023],"about_ca_topic_score_codex":0.00263867,"about_ca_topic_score_gemma":0.00083996076,"teacher_disagreement_score":0.8043661,"about_ca_system_score_codex":0.0000723496,"about_ca_system_score_gemma":0.000047674752,"threshold_uncertainty_score":0.62011653},"labels":[],"label_agreement":null},{"id":"W4382136738","doi":"10.3390/v15071419","title":"Kunjin Virus, Zika Virus, and Yellow Fever Virus Infections Have Distinct Effects on the Coding Transcriptome and Proteome of Brain-Derived U87 Cells","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Université de Sherbrooke","keywords":"Zika virus; Transcriptome; Virology; Virus; Biology; Proteome; Gene; Gene expression; Bioinformatics; Genetics","score_opus":0.020965588579704517,"score_gpt":0.2703305199763584,"score_spread":0.24936493139665386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382136738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958042,0.00065750466,0.000109700755,0.0010074934,0.00019193396,0.0015019893,0.00023455845,0.00016071484,0.00033192444],"genre_scores_gemma":[0.99555993,0.00040455727,0.000014727375,0.0031448137,0.00018841994,0.00023669557,0.000014457033,0.000054100023,0.0003823204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983825,0.00016408107,0.00032775785,0.00042944527,0.00031949155,0.00037670656],"domain_scores_gemma":[0.9983381,0.0008736267,0.000120832396,0.00039313082,0.00005752346,0.00021676841],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029152635,0.0003049842,0.0004992792,0.00019799771,0.0002822423,0.0000669491,0.00010637725,0.00011287507,0.0001321072],"category_scores_gemma":[0.0003104415,0.00021379623,0.00015223444,0.00032730176,0.00025268015,0.00011620177,0.00006316389,0.0002481478,0.000058250054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038163926,0.00020435338,0.005473208,0.0004225235,0.00019082185,0.000051655694,0.00054340775,0.000004540242,0.9873661,0.00025546702,0.0029516434,0.0021546632],"study_design_scores_gemma":[0.0039627855,0.0011630862,0.20097132,0.00073191454,0.0005927122,0.000016031121,0.00028824582,0.00067134865,0.76957846,0.00031145528,0.02125608,0.00045654716],"about_ca_topic_score_codex":0.00069130625,"about_ca_topic_score_gemma":0.00023133212,"teacher_disagreement_score":0.2177876,"about_ca_system_score_codex":0.000031303534,"about_ca_system_score_gemma":0.000059821432,"threshold_uncertainty_score":0.8718357},"labels":[],"label_agreement":null},{"id":"W4382721605","doi":"10.3390/v15071470","title":"Upstream Stimulatory Factors Regulate HIV-1 Latency and Are Required for Robust T Cell Activation","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Biology; Enhancer; Activator (genetics); Transcription factor; Gene; Molecular biology; Transcription (linguistics); Gene expression; Cell biology; Genetics","score_opus":0.06622710457754219,"score_gpt":0.28864099794741627,"score_spread":0.22241389336987408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382721605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982875,0.00037885812,0.000058006575,0.00012855673,0.00010797342,0.00032024796,0.00040187652,0.00014790829,0.00016906203],"genre_scores_gemma":[0.99485433,0.00011471574,0.00004672843,0.00003492564,0.00001709116,0.000045416233,0.00049044535,0.000017720937,0.0043786317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929243,0.000053087217,0.00011728617,0.00022106204,0.000026809566,0.00028929304],"domain_scores_gemma":[0.9994918,0.00022827747,0.00005930179,0.00015716677,0.000034118588,0.00002931442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077377474,0.00011911343,0.00014634132,0.00011746568,0.00020264019,0.000014459354,0.00006652633,0.00012231992,0.00012295916],"category_scores_gemma":[0.00006835319,0.00009253657,0.00004214514,0.00010721451,0.00008398086,0.00011164755,0.000042640557,0.00007178094,0.00072246144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005537451,0.00029978476,0.21486358,0.00012508812,0.00036109053,0.000013049534,0.00090977957,0.00026659618,0.72418725,0.00016095588,0.052004267,0.0062547983],"study_design_scores_gemma":[0.0032334344,0.00040751262,0.28234047,0.00006009122,0.00005160403,0.0000024704195,0.00071874564,0.000044540673,0.6659652,0.00028762184,0.04661242,0.00027591677],"about_ca_topic_score_codex":0.000055384047,"about_ca_topic_score_gemma":0.000010549484,"teacher_disagreement_score":0.06747688,"about_ca_system_score_codex":0.00002706424,"about_ca_system_score_gemma":0.00002879869,"threshold_uncertainty_score":0.9286021},"labels":[],"label_agreement":null},{"id":"W4382722102","doi":"10.3390/v15071473","title":"Modulation of Reoviral Cytolysis (II): Cellular Stemness","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"University of Toronto; Canadian Institutes of Health Research; Dalhousie University","keywords":"Oncolytic virus; Induced pluripotent stem cell; Cytolysis; Biology; Embryonic stem cell; Cancer cell; Stem cell; Cell biology; Tropism; Cancer stem cell; Cancer research; Immune system; Cancer; Immunology; In vitro; Cytotoxic T cell; Virus; Genetics","score_opus":0.03754082835116819,"score_gpt":0.31434429891834076,"score_spread":0.2768034705671726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382722102","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99889994,0.00034672685,0.00016191727,0.00005139984,0.00007144745,0.0001251476,0.000036981353,0.000032207237,0.00027420674],"genre_scores_gemma":[0.9984606,0.00017242754,0.00006077181,0.00008899497,0.00013589935,0.00001988174,0.00011650788,0.000026177986,0.0009187757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906754,0.000083296254,0.00018028391,0.00024106668,0.00021773794,0.00021009645],"domain_scores_gemma":[0.99940073,0.000012085873,0.000060015635,0.0004070659,0.000074517804,0.000045599918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026248285,0.00010093334,0.00012668944,0.00011742259,0.00008711104,0.000009808394,0.00019614147,0.00009564493,0.00007142359],"category_scores_gemma":[0.000044307875,0.0000977003,0.00008067767,0.0003432106,0.000067753506,0.0000047460244,0.00013455693,0.000048331996,0.00006086169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041339296,0.00003407293,0.0015340485,0.000017923398,0.000051176343,0.0000025693741,0.00004104062,0.0006555813,0.9931018,0.000028074024,0.00083657535,0.0032837747],"study_design_scores_gemma":[0.00029776982,0.00080127374,0.0013903482,0.0000067105034,0.000008251749,5.090585e-7,0.00003843289,0.000382638,0.9917001,0.00007356262,0.005191543,0.00010883025],"about_ca_topic_score_codex":0.00003363563,"about_ca_topic_score_gemma":0.000039793096,"teacher_disagreement_score":0.0043549677,"about_ca_system_score_codex":0.000008456555,"about_ca_system_score_gemma":0.000052582312,"threshold_uncertainty_score":0.39841026},"labels":[],"label_agreement":null},{"id":"W4382723404","doi":"10.3390/v15071472","title":"Modulation of Reoviral Cytolysis (I): Combination Therapeutics","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Cancer Research Society","keywords":"Oncolytic virus; Paclitaxel; In vivo; Irinotecan; Combination therapy; Cancer research; Docetaxel; Cytotoxicity; Pharmacology; Cancer cell; Cancer; Camptothecin; In vitro; Apoptosis; Cytolysis; Cell culture; Medicine; Biology; Colorectal cancer; Internal medicine","score_opus":0.05282187235678301,"score_gpt":0.3442073839648187,"score_spread":0.2913855116080357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382723404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990619,0.00019226017,0.00018016709,0.00010604727,0.00005417332,0.000109529785,0.000019992058,0.000028459355,0.0002474827],"genre_scores_gemma":[0.9988305,0.0003718394,0.000063952066,0.00020982297,0.000062168176,0.000013180505,0.00011622079,0.000019441084,0.00031286635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992897,0.000075104144,0.0001424842,0.00016258063,0.00018443423,0.00014573125],"domain_scores_gemma":[0.9995497,0.000015644275,0.00005463274,0.0002729102,0.00008295283,0.000024166731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002188758,0.00007538121,0.00008489974,0.000106923515,0.00004736438,0.0000102426775,0.0001328931,0.00007776364,0.000025855226],"category_scores_gemma":[0.000028837525,0.000073365474,0.000054865173,0.0002964718,0.000056633617,0.0000044775843,0.00005103261,0.00004025437,0.000045603712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033968824,0.00003940299,0.0032234385,0.000007936672,0.0000527239,5.213494e-7,0.00003483905,0.0003843407,0.98584163,0.00006969475,0.0003315741,0.009674236],"study_design_scores_gemma":[0.00038961272,0.0008977175,0.009886976,0.0000040533005,0.0000093208055,4.6381498e-7,0.00003124773,0.0011424838,0.9842725,0.00030443197,0.002974023,0.000087207416],"about_ca_topic_score_codex":0.000014981831,"about_ca_topic_score_gemma":0.000029181398,"teacher_disagreement_score":0.009587028,"about_ca_system_score_codex":0.000008565616,"about_ca_system_score_gemma":0.000038901533,"threshold_uncertainty_score":0.29917574},"labels":[],"label_agreement":null},{"id":"W4382725546","doi":"10.3390/v15071462","title":"Modulation of the Host Response as a Therapeutic Strategy in Severe Lung Infections","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Respiratory Support and Mechanisms","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"ARDS; Pathogen; Immunology; Lung; Medicine; Respiratory distress; Diffuse alveolar damage; Immune system; Intensive care medicine; Acute respiratory distress; Biology; Internal medicine","score_opus":0.13832176102376068,"score_gpt":0.40873539598697745,"score_spread":0.2704136349632168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382725546","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011195743,0.98620373,0.000009302252,0.000026104746,0.00030064138,0.0015414498,0.000046594443,0.000072987525,0.00060345256],"genre_scores_gemma":[0.0059760883,0.9915523,0.0000036048125,0.00020616713,0.00008804055,0.00013470289,0.000015162962,0.00006592016,0.0019580026],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99866736,0.00030281732,0.0004646732,0.00020280728,0.00020984325,0.00015251749],"domain_scores_gemma":[0.999031,0.00022906084,0.00023117964,0.00042370392,0.000041553158,0.000043482938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039348716,0.00020039645,0.00071273197,0.00031752052,0.00004419495,0.000011921382,0.00010835431,0.00023818269,0.00014763238],"category_scores_gemma":[0.00016768485,0.00012366893,0.00027230853,0.0007688376,0.00003578121,0.00005682058,0.000042124113,0.00029398393,0.000104229446],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050194026,0.00049150194,0.0026104765,0.025633274,0.0008786297,0.00013559147,0.00035691715,0.0000472408,0.003796367,0.0021163616,0.0007173518,0.9627144],"study_design_scores_gemma":[0.00035963996,0.00028629368,0.004703596,0.010022463,0.00065709505,0.00006562591,0.00006196283,0.000016388232,0.0000938765,0.00016248107,0.9833884,0.00018217896],"about_ca_topic_score_codex":0.000095092626,"about_ca_topic_score_gemma":0.00007336949,"teacher_disagreement_score":0.982671,"about_ca_system_score_codex":0.00009483204,"about_ca_system_score_gemma":0.00093117944,"threshold_uncertainty_score":0.50430727},"labels":[],"label_agreement":null},{"id":"W4382752997","doi":"10.3390/v15071483","title":"A Trivalent HSV-2 gC2, gD2, gE2 Nucleoside-Modified mRNA-LNP Vaccine Provides Outstanding Protection in Mice against Genital and Non-Genital HSV-1 Infection, Comparable to the Same Antigens Derived from HSV-1","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; Perelman School of Medicine, University of Pennsylvania; University of Pennsylvania; BioNTech","keywords":"Virology; Immunology; Medicine; HSL and HSV; DNA vaccination; Sex organ; Vaccine efficacy; CD8; Herpes simplex virus; Antibody; Antigen; Virus; Biology; Vaccination; Immunization","score_opus":0.054215773112924644,"score_gpt":0.3058924352768257,"score_spread":0.25167666216390105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382752997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99471277,0.00018084189,0.0008289839,0.0007224783,0.0004444456,0.002305858,0.00011890418,0.00031556372,0.0003701607],"genre_scores_gemma":[0.9977118,0.00030467592,0.00025296028,0.0006358048,0.00037213723,0.00040884822,0.000059095568,0.000067846784,0.00018686394],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978636,0.00014861874,0.0005641551,0.0006002626,0.00030342696,0.00051991956],"domain_scores_gemma":[0.99895185,0.00018572206,0.00014801398,0.00038380304,0.000113572765,0.00021703381],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035757505,0.00037699574,0.0005426873,0.00052723684,0.00049499073,0.00015086205,0.000098277276,0.0001586024,0.000048488957],"category_scores_gemma":[0.0002517782,0.00028824108,0.00013132668,0.0010617243,0.00005725076,0.00027615117,0.00012007318,0.0003406853,0.00038731573],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016910499,0.0014047021,0.61791396,0.00025876635,0.0010886597,0.00023853235,0.0055663898,0.0026392888,0.32929552,0.00003279451,0.0022601257,0.03761022],"study_design_scores_gemma":[0.00788787,0.0009341623,0.8880337,0.0005465935,0.00038064006,0.00006679896,0.00094076135,0.0061194734,0.07257334,0.00015280732,0.021686934,0.0006769563],"about_ca_topic_score_codex":0.008753908,"about_ca_topic_score_gemma":0.004871998,"teacher_disagreement_score":0.2701197,"about_ca_system_score_codex":0.0002766699,"about_ca_system_score_gemma":0.00009725967,"threshold_uncertainty_score":0.99995697},"labels":[],"label_agreement":null},{"id":"W4382787414","doi":"10.3390/v15071479","title":"Equine Polyclonal Antibodies Prevent Acute Chikungunya Virus Infection in Mice","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Emergent BioSolutions (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Polyclonal antibodies; Chikungunya; Virology; Antibody; Virus; Immunology; Medicine; Alphavirus; Biology","score_opus":0.02259897246005656,"score_gpt":0.32592438498719734,"score_spread":0.3033254125271408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382787414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99679,0.0011042237,0.000018906303,0.00048161796,0.0003008097,0.0003322187,0.00007626009,0.00021263208,0.0006833196],"genre_scores_gemma":[0.99499756,0.002043953,0.000022632508,0.0014145048,0.0003471946,0.00006301196,0.00006668032,0.00002642506,0.0010180649],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989181,0.00003710906,0.00024658837,0.00026128918,0.00022453132,0.00031235683],"domain_scores_gemma":[0.9995582,0.000047798465,0.000057624246,0.00019373195,0.000033038737,0.00010957462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012183642,0.00015393502,0.00026607479,0.00023897072,0.00005720608,0.000023606442,0.0000617072,0.00006557146,0.00024167346],"category_scores_gemma":[0.00007466055,0.0001321802,0.00011933897,0.00042103822,0.00003781668,0.00011902352,0.00006535735,0.0001263735,0.0004039519],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012902379,0.0008294405,0.38558558,0.00019097849,0.00045147692,0.00050955237,0.00026427634,0.00007129829,0.581782,0.0006222028,0.011823436,0.016579533],"study_design_scores_gemma":[0.0020725538,0.0004458524,0.9539931,0.00018354013,0.00028627482,0.000026456548,0.00003603905,0.00067262904,0.024416372,0.00019444549,0.017451894,0.00022083621],"about_ca_topic_score_codex":0.0015371947,"about_ca_topic_score_gemma":0.0004893581,"teacher_disagreement_score":0.56840754,"about_ca_system_score_codex":0.000045415876,"about_ca_system_score_gemma":0.00007578445,"threshold_uncertainty_score":0.53901523},"labels":[],"label_agreement":null},{"id":"W4383550982","doi":"10.3390/v15071512","title":"Special Issue of the 4th Symposium of the Canadian Society for Virology 2022","year":2023,"lang":"en","type":"editorial","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Virology; Molecular virology; Engineering ethics; Library science; Environmental ethics; Biology; Philosophy; Engineering; Virus; Computer science","score_opus":0.0205815324127872,"score_gpt":0.30050490992655504,"score_spread":0.27992337751376783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383550982","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0029832136,0.00005715974,7.1643825e-7,0.0012568968,0.99096185,0.00057508284,0.0016803169,0.000016258316,0.00246852],"genre_scores_gemma":[0.0009260777,0.00015527627,0.000009450079,0.00042206835,0.9904995,0.000046530662,0.000048738755,0.00004918691,0.007843174],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99895877,0.000042872078,0.00027720435,0.00018664589,0.00030304238,0.00023144824],"domain_scores_gemma":[0.9987482,0.00038378715,0.00021137277,0.00042903156,0.00016563169,0.00006199959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021920679,0.00015419618,0.00038264145,0.00006809644,0.0002220274,0.000008137539,0.00024956523,0.00057489384,0.0002818699],"category_scores_gemma":[0.0005584013,0.00008759331,0.0005872387,0.0002981126,0.0002579158,0.000019018467,0.000082299455,0.00047686326,0.000012750076],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033124226,0.000027154265,0.00045088923,0.00012671108,0.00019417933,3.8484816e-7,0.00015479812,0.0000052299893,0.0017856911,0.000070419286,0.99707276,0.000078649166],"study_design_scores_gemma":[0.00037343585,0.00020515028,0.0007214167,0.000072461145,0.00031559562,6.172621e-7,0.00004401054,0.0000042150455,0.0018725771,0.000034424877,0.99628,0.00007609303],"about_ca_topic_score_codex":0.14793958,"about_ca_topic_score_gemma":0.36872867,"teacher_disagreement_score":0.22078909,"about_ca_system_score_codex":0.00018121241,"about_ca_system_score_gemma":0.001529083,"threshold_uncertainty_score":0.8577344},"labels":[],"label_agreement":null},{"id":"W4384202144","doi":"10.3390/v15071541","title":"Significantly Longer Shedding of Norovirus Compared to Rotavirus and Adenovirus in Children with Acute Gastroenteritis","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Hospital Edmonton; Université de Montréal; Hospital for Sick Children; SickKids Foundation; University of Toronto; Western University; Centre Hospitalier Universitaire Sainte-Justine; Women and Children’s Health Research Institute; University of Ottawa; Stollery Children's Hospital; Alberta Children's Hospital; University of Calgary; University of Alberta","funders":"IWK Health Centre; Dalhousie University; University of Toronto; Hospital for Sick Children; Canadian Institutes of Health Research; University of Cincinnati; Cincinnati Children's Hospital Medical Center","keywords":"Norovirus; Rotavirus; Medicine; Viral shedding; Viral load; Virology; Rotavirus vaccine; Virus","score_opus":0.03305478562707499,"score_gpt":0.3274857599986977,"score_spread":0.29443097437162274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384202144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99830925,0.00012164222,0.000101798156,0.00039012672,0.000030361429,0.0006553277,0.00022965815,0.000080718266,0.00008110668],"genre_scores_gemma":[0.99711573,0.00041503133,0.0011849806,0.0010005714,0.000062155596,0.000077205324,0.000046928646,0.000036322646,0.000061057464],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980823,0.00011115186,0.00042487824,0.00041770015,0.00027993284,0.0006840665],"domain_scores_gemma":[0.9992212,0.00003682286,0.000075306794,0.00026863022,0.000056076966,0.00034198017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027353223,0.00020657163,0.000648388,0.000513417,0.000046606816,0.000020757974,0.00014407556,0.000060427083,0.000076915756],"category_scores_gemma":[0.00014282425,0.0001738136,0.00005288323,0.0005599152,0.00019641065,0.00012738029,0.00015958291,0.00022178052,0.00008443029],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019581814,0.00008863176,0.8806287,0.000035281322,0.00017620831,0.00032867622,0.00012637861,0.000040645045,0.11281598,0.0000098463515,0.0010825739,0.0027088635],"study_design_scores_gemma":[0.00243441,0.001759867,0.98961043,0.00027568315,0.000045204164,0.00034853414,0.00014677568,0.000084413274,0.004915418,0.000010574249,0.00024434217,0.00012436636],"about_ca_topic_score_codex":0.0011820283,"about_ca_topic_score_gemma":0.00051288545,"teacher_disagreement_score":0.108981684,"about_ca_system_score_codex":0.000047808557,"about_ca_system_score_gemma":0.000046082794,"threshold_uncertainty_score":0.70879126},"labels":[],"label_agreement":null},{"id":"W4384202810","doi":"10.3390/v15071542","title":"A Development of Rapid Whole-Genome Sequencing of Seoul orthohantavirus Using a Portable One-Step Amplicon-Based High Accuracy Nanopore System","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Ministry of Science and ICT, South Korea; Korea Institute of Marine Science and Technology promotion; Institute for Basic Science; National Research Foundation of Korea; Ministry of Oceans and Fisheries; Korea University; National Research Foundation","keywords":"Minion; Nanopore sequencing; Amplicon; Biology; Whole genome sequencing; Computational biology; Genome; Genetics; Gene; Polymerase chain reaction","score_opus":0.12710076728778755,"score_gpt":0.3279763921354549,"score_spread":0.20087562484766733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384202810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791676,0.00015301906,0.0008108279,0.000014354585,0.0001705563,0.00043200527,0.00011880506,0.0001991138,0.00018457745],"genre_scores_gemma":[0.9935154,0.000012543129,0.006095952,0.00009824367,0.00006425104,0.000027843795,0.00008647263,0.000044437005,0.000054898024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982684,0.000042116768,0.0007545487,0.000279736,0.00032835506,0.00032682327],"domain_scores_gemma":[0.99887115,0.00009598324,0.0003788762,0.00036171614,0.00018096156,0.00011131972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038035528,0.00020305022,0.000579231,0.00045345863,0.00014837574,0.000014840454,0.00009225798,0.00010875384,0.00009389277],"category_scores_gemma":[0.0000852734,0.00018133197,0.00011906053,0.0009740444,0.00006530873,0.00012449459,0.000056857494,0.00012058927,0.000046912744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007570455,0.00008722009,0.013647395,0.0009839359,0.00016601276,0.000037022135,0.00032395488,0.00054564484,0.98286957,0.000118400574,0.000031659692,0.0011135036],"study_design_scores_gemma":[0.002005029,0.0003860783,0.02320798,0.0021858634,0.00033494862,0.00005007249,0.0023064264,0.0020742028,0.9578449,0.0000059687936,0.009169908,0.00042859552],"about_ca_topic_score_codex":0.001668813,"about_ca_topic_score_gemma":0.00009032619,"teacher_disagreement_score":0.025024619,"about_ca_system_score_codex":0.00027834208,"about_ca_system_score_gemma":0.00085487566,"threshold_uncertainty_score":0.7394503},"labels":[],"label_agreement":null},{"id":"W4384526109","doi":"10.3390/v15071557","title":"Special Issue “Advances in Rabies Research”","year":2023,"lang":"en","type":"editorial","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Rabies; Virology; Geography; Biology","score_opus":0.04920255289090181,"score_gpt":0.3869070703907317,"score_spread":0.3377045174998299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384526109","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018253381,0.020311441,8.3542346e-7,0.00034034863,0.96506,0.00028828194,0.000365108,0.00016639582,0.013285037],"genre_scores_gemma":[0.000050583276,0.021713912,0.00000491042,0.00012358154,0.9475055,0.00018956528,0.00040062246,0.0000621393,0.029949205],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956057,0.0018242021,0.000644431,0.0007432348,0.00014252069,0.001039889],"domain_scores_gemma":[0.98374027,0.01534513,0.00018387122,0.0005204482,0.00018341246,0.0000268823],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.0026320238,0.0003646891,0.0009836268,0.0006090061,0.00030275763,0.000025236677,0.0007833261,0.0025908174,0.0023053922],"category_scores_gemma":[0.015481832,0.00032070343,0.00014162372,0.0004091488,0.0010615139,0.0002172176,0.00026916785,0.003269494,0.021828663],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004944752,0.000051104755,0.000231493,0.0000530988,0.000101226826,0.000043681874,0.00014092734,0.000006004517,0.0005215932,0.00042545327,0.99076444,0.007166517],"study_design_scores_gemma":[0.0009322182,0.00017038932,0.0001188665,0.00015787948,0.000021120011,8.702545e-7,0.00020714167,1.3513616e-7,0.00039882763,0.0019452786,0.99574786,0.00029941992],"about_ca_topic_score_codex":0.00060811336,"about_ca_topic_score_gemma":0.00190965,"teacher_disagreement_score":0.01952327,"about_ca_system_score_codex":0.00011294035,"about_ca_system_score_gemma":0.00030682824,"threshold_uncertainty_score":0.9999245},"labels":[],"label_agreement":null},{"id":"W4384557607","doi":"10.3390/v15071558","title":"The Re-Emergence of Hepatitis E Virus in Europe and Vaccine Development","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"European Regional Development Fund; L'Oreal USA","keywords":"Hepatitis E virus; Transmission (telecommunications); Virology; Hepatitis E; Medicine; Virus; Viral hepatitis; Vaccination; Environmental health; Immunology; Biology; Genotype","score_opus":0.1917060074710485,"score_gpt":0.4135276104655197,"score_spread":0.22182160299447123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384557607","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00071746454,0.99775296,0.0000044945846,0.00008541937,0.00033003994,0.00058246835,0.000041312644,0.000040408173,0.00044542796],"genre_scores_gemma":[0.00000577193,0.9988985,0.00019190703,0.000287917,0.00010582007,0.0001440689,0.000018188593,0.000058725,0.00028908838],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99757063,0.0002415969,0.0012813363,0.0003710283,0.0001664454,0.00036897],"domain_scores_gemma":[0.99805653,0.0010353002,0.00036614423,0.00036240552,0.000094657924,0.00008494513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007402378,0.00031723728,0.0019013619,0.00017247887,0.00012534662,0.000007007547,0.00017444698,0.00016194771,0.00006755672],"category_scores_gemma":[0.0016448378,0.00018827374,0.0001050926,0.00074437715,0.00009848793,0.000028350316,0.00031432067,0.00030914604,0.00016789859],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020098238,0.000036628935,0.01633522,0.0073605464,0.00032243412,0.000085129075,0.00011499422,1.345457e-7,0.0000025715387,0.00018072815,0.014919566,0.96062195],"study_design_scores_gemma":[0.00014638167,0.00009638312,0.0061083673,0.0074441056,0.00019559488,0.000013458611,0.000015424623,0.0000026090736,0.0000055121445,0.000011469512,0.9857957,0.00016502924],"about_ca_topic_score_codex":0.0063458243,"about_ca_topic_score_gemma":0.02911916,"teacher_disagreement_score":0.9708761,"about_ca_system_score_codex":0.000045260556,"about_ca_system_score_gemma":0.00028682404,"threshold_uncertainty_score":0.98859686},"labels":[],"label_agreement":null},{"id":"W4385226410","doi":"10.3390/v15071610","title":"Nonenveloped Avian Reoviruses Released with Small Extracellular Vesicles Are Highly Infectious","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Vesicle; Virology; Virus; Biology; Extracellular; Immune system; Capsid; Virulence; Cell biology; Immunology; Biochemistry; Gene; Membrane","score_opus":0.024304421391096533,"score_gpt":0.2452484976343566,"score_spread":0.22094407624326007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385226410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556875,0.0021579615,0.00066234916,0.00012425063,0.00016282704,0.0003294735,0.0000742268,0.00033293656,0.0005872116],"genre_scores_gemma":[0.99569625,0.00044596306,0.0008765386,0.0007511647,0.00033532412,0.00008747938,0.00016076301,0.00012612935,0.0015203801],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981119,0.00013198251,0.00031283655,0.000674138,0.00024952125,0.00051963085],"domain_scores_gemma":[0.99858665,0.000045546425,0.00019116711,0.0008293039,0.00010861844,0.00023871848],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021052241,0.00034297162,0.00024410592,0.00015306893,0.000214642,0.000083015766,0.00036295663,0.00020472577,0.000045238925],"category_scores_gemma":[0.00020638086,0.0003142167,0.00011491416,0.00047018548,0.00020987606,0.000014667028,0.00017218622,0.00015762511,0.0005164592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027634774,0.00016429539,0.07499285,0.000062279614,0.00011803325,0.00028845898,0.00004725632,0.0001681433,0.918501,0.00012473317,0.0036215947,0.0016350144],"study_design_scores_gemma":[0.0013114407,0.00035201467,0.039030626,0.000082547405,0.00008616502,0.000032369026,0.00018582887,0.000035131106,0.82621735,0.00015933558,0.13181603,0.00069114467],"about_ca_topic_score_codex":0.000089411194,"about_ca_topic_score_gemma":0.00018483658,"teacher_disagreement_score":0.12819444,"about_ca_system_score_codex":0.000025009067,"about_ca_system_score_gemma":0.00014185173,"threshold_uncertainty_score":0.999931},"labels":[],"label_agreement":null},{"id":"W4385245021","doi":"10.3390/v15071606","title":"Adaptation of Droplet Digital PCR-Based HIV Transcription Profiling to Digital PCR and Association of HIV Transcription and Total or Intact HIV DNA","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; National Institute of Diabetes and Digestive and Kidney Diseases; Medical Research Council; University of California, San Francisco","keywords":"Digital polymerase chain reaction; Biology; Transcription (linguistics); Viremia; Human immunodeficiency virus (HIV); Reverse transcriptase; RNA; Virology; DNA; Molecular biology; Genetics; Polymerase chain reaction; Gene","score_opus":0.03628373509060345,"score_gpt":0.26738354254917207,"score_spread":0.23109980745856862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385245021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956218,0.00016580759,0.00079318,0.00027655342,0.00007612759,0.00040986884,0.0025132168,0.00006439846,0.00007907569],"genre_scores_gemma":[0.9974728,0.00005690512,0.00006164387,0.000017876444,0.000013956844,0.000036418012,0.0014000704,0.000014499113,0.0009257795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907076,0.000070585695,0.00029041353,0.00023027185,0.00009710978,0.00024084431],"domain_scores_gemma":[0.9995106,0.00017851806,0.000099280376,0.00009366935,0.000077231845,0.00004068564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014595276,0.00013854406,0.00023983288,0.00022219785,0.00008066541,0.000044974076,0.000048080637,0.00013092154,0.00004181615],"category_scores_gemma":[0.00015286687,0.00011570744,0.000057858928,0.00022141695,0.0000748324,0.00041760155,0.000015626845,0.000093232826,0.00012968096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012103716,0.00022720038,0.055325616,0.00009763747,0.0001763465,0.000004661969,0.0011894954,0.00006290489,0.9286566,0.00006676627,0.00052497856,0.012457413],"study_design_scores_gemma":[0.0074893623,0.0022996287,0.15563437,0.00021515483,0.00015402856,0.000017206252,0.0029258758,0.0004149556,0.82374305,0.00006934882,0.0066409637,0.000396084],"about_ca_topic_score_codex":0.0000435166,"about_ca_topic_score_gemma":0.000040041876,"teacher_disagreement_score":0.104913585,"about_ca_system_score_codex":0.00006153166,"about_ca_system_score_gemma":0.000068152855,"threshold_uncertainty_score":0.47184122},"labels":[],"label_agreement":null},{"id":"W4385309935","doi":"10.3390/v15081629","title":"Multiple Porcine Innate Immune Signaling Pathways Are Involved in the Anti-PEDV Response","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"Higher Education Discipline Innovation Project; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"TRIF; Innate immune system; Sting; Virology; Biology; Porcine epidemic diarrhea virus; Vero cell; Interferon; Immunity; Immune system; Virus; Immunology; Toll-like receptor","score_opus":0.09931904014522934,"score_gpt":0.2662747437905249,"score_spread":0.16695570364529555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385309935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978125,0.00035892994,4.393043e-7,0.0012019186,0.000088657674,0.00018062243,0.000056176334,0.00019720892,0.0001035367],"genre_scores_gemma":[0.9990216,0.00016918768,0.0000085096735,0.000587131,0.00011440443,0.00004473825,0.000010958405,0.0000014669226,0.00004198963],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99885267,0.00026287936,0.00022588401,0.0002155032,0.00016632801,0.00027675202],"domain_scores_gemma":[0.9986681,0.0011092159,0.000085999665,0.00007153974,0.00004172713,0.000023423621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008512541,0.00013058701,0.00017309967,0.000040183684,0.00041026977,0.00005253226,0.00024531953,0.000057077712,0.00006331923],"category_scores_gemma":[0.00064402487,0.000042810705,0.00006781134,0.001192486,0.00008044877,0.00011499702,0.00013290095,0.00014435561,0.00026487056],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012321415,0.00005246094,0.21395865,0.0000028513516,0.0000082336965,0.000026258522,0.00032707406,0.00002771879,0.78406113,0.00005925395,0.00054328796,0.0008098502],"study_design_scores_gemma":[0.00014096173,0.00013817807,0.96054417,0.000031628908,0.0000049101013,0.0000015374604,0.004907096,0.000047838817,0.022620052,0.00017402349,0.011258186,0.00013142968],"about_ca_topic_score_codex":0.00081848796,"about_ca_topic_score_gemma":0.0016651066,"teacher_disagreement_score":0.7614411,"about_ca_system_score_codex":0.000019278094,"about_ca_system_score_gemma":0.000005402608,"threshold_uncertainty_score":0.34044635},"labels":[],"label_agreement":null},{"id":"W4385347332","doi":"10.3390/v15081633","title":"Effect of Pre-Treatment with a Recombinant Chicken Interleukin-17A on Vaccine Induced Immunity against a Very Virulent Marek’s Disease Virus","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Veterinary College, University of Guelph; Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; University of Guelph","keywords":"Marek's disease; Virology; Virulence; Biology; Immunity; Plasmid; Virus; Vaccination; Spleen; Inoculation; Immune system; Microbiology; Immunology; Gene; Genetics","score_opus":0.022763183467885806,"score_gpt":0.31395034893475016,"score_spread":0.29118716546686435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385347332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970853,0.00013467598,0.0000022271154,0.00009367908,0.00030328814,0.0012846058,0.00011556818,0.00027113224,0.00070956873],"genre_scores_gemma":[0.9980791,0.0006349558,0.000013936201,0.00022894474,0.000061647865,0.0004163985,0.00012004403,0.00006611809,0.0003788351],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99831545,0.0002393398,0.00036487647,0.0004046819,0.00030523946,0.00037041685],"domain_scores_gemma":[0.99841565,0.00030154936,0.00015157725,0.0007884474,0.00005988412,0.00028290946],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023326388,0.0004113574,0.000619072,0.00039633768,0.00016202545,0.00002349258,0.00010321614,0.0000938027,0.00010760559],"category_scores_gemma":[0.00010320157,0.00025167267,0.0002050393,0.00055226707,0.000045180594,0.000106109255,0.0000782062,0.0002006424,0.00035150463],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.044708904,0.010561466,0.3803304,0.00088166184,0.004168578,0.0020634402,0.0010862577,0.00010505524,0.048319202,0.00006837967,0.0010958867,0.50661075],"study_design_scores_gemma":[0.01893261,0.04270255,0.5159423,0.0022946713,0.0014507698,0.000028978315,0.00007203145,0.00017726548,0.4027934,0.000031932723,0.014981852,0.0005916351],"about_ca_topic_score_codex":0.0018064184,"about_ca_topic_score_gemma":0.0002200821,"teacher_disagreement_score":0.5060191,"about_ca_system_score_codex":0.00037985516,"about_ca_system_score_gemma":0.00016976858,"threshold_uncertainty_score":0.99999356},"labels":[],"label_agreement":null},{"id":"W4385347378","doi":"10.3390/v15081641","title":"Contribution of the Nuclear Localization Sequences of Influenza A Nucleoprotein to the Nuclear Import of the Influenza Genome in Infected Cells","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of Hong Kong; St. Jude Children's Research Hospital","keywords":"Nucleoprotein; Ribonucleoprotein; Biology; Virology; Nuclear transport; Virus; Nuclear export signal; Viral replication; Influenza A virus; RNA; Nuclear localization sequence; Cell nucleus; Cytoplasm; Molecular biology; Cell biology; Genetics; Gene","score_opus":0.06141520632450266,"score_gpt":0.3476882333700605,"score_spread":0.28627302704555785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385347378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970674,0.00029363402,0.0000039545266,0.0005348866,0.000088237975,0.0016621669,0.000115301445,0.000052268868,0.00018217436],"genre_scores_gemma":[0.9967772,0.000108880144,0.000020918478,0.0029653867,0.000041428415,0.00003601195,0.0000017856513,0.000034556084,0.0000138482565],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99748796,0.00029145286,0.00080659724,0.00023302577,0.0008143817,0.00036660014],"domain_scores_gemma":[0.99813193,0.00019270595,0.00040992734,0.00073011586,0.0004752461,0.000060091243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009308273,0.00018929926,0.00047067163,0.00024578092,0.00019090583,0.00001544186,0.0005124341,0.00012395778,0.00008713778],"category_scores_gemma":[0.0019734076,0.000099195364,0.00016172839,0.002177293,0.0006170241,0.00012587213,0.0005488019,0.00028912566,0.00007152562],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005220479,0.00013422962,0.12178788,0.00023202339,0.00013497953,0.0000033328756,0.004354012,0.0044990927,0.86625403,0.0011306021,0.0007079858,0.00023976775],"study_design_scores_gemma":[0.0016123741,0.00040893376,0.64885855,0.00062878645,0.00009500491,0.000002796835,0.0012061356,0.00063448545,0.2800105,0.00019699053,0.0661672,0.00017828679],"about_ca_topic_score_codex":0.0017128607,"about_ca_topic_score_gemma":0.00023347314,"teacher_disagreement_score":0.58624357,"about_ca_system_score_codex":0.00012277944,"about_ca_system_score_gemma":0.0001793065,"threshold_uncertainty_score":0.40450695},"labels":[],"label_agreement":null},{"id":"W4385422564","doi":"10.3390/v15081655","title":"Airway Epithelial-Derived Immune Mediators in COVID-19","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Institute of Circulatory and Respiratory Health; Canadian Institutes of Health Research; Michael Smith Health Research BC; St. Paul's Foundation; Canadian Allergy, Asthma and Immunology Foundation","keywords":"Respiratory epithelium; Immune system; Immunology; Chemokine; Innate immune system; Epithelium; Inflammation; Pneumonia; Coronavirus; Lung; Medicine; Biology; Coronavirus disease 2019 (COVID-19); Pathology","score_opus":0.2329343038189681,"score_gpt":0.521565163480846,"score_spread":0.28863085966187796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385422564","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000038692437,0.99503535,0.000013581459,0.0014396156,0.0004964088,0.002191297,0.00028767207,0.00037418585,0.0001231678],"genre_scores_gemma":[0.000013177144,0.99413323,0.00004049495,0.0033797722,0.00059396314,0.00073804025,0.000094921146,0.00016452454,0.0008418793],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99503374,0.00055291806,0.0017006584,0.0009262859,0.0009618668,0.0008245346],"domain_scores_gemma":[0.97037476,0.02720887,0.0004299101,0.0010926184,0.00010485369,0.0007889552],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001964726,0.00064238254,0.004079671,0.0010151633,0.00012407273,0.000039403974,0.0005733632,0.000554496,0.00056520617],"category_scores_gemma":[0.17099898,0.00045815558,0.0009287472,0.0017128336,0.00047640566,0.000087382665,0.0008088948,0.0013903274,0.00375119],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015336159,0.00033591708,0.00018899444,0.14062737,0.0010283203,0.0014545558,0.0002690898,0.000003544502,0.00003693952,0.000066137734,0.0055394405,0.8502963],"study_design_scores_gemma":[0.0011643941,0.00019234569,0.000092517104,0.01946815,0.00055958977,0.0000024328153,0.00003728824,0.0000021696203,0.000011992584,0.00008583424,0.97800654,0.00037674158],"about_ca_topic_score_codex":0.00132661,"about_ca_topic_score_gemma":0.00018490992,"teacher_disagreement_score":0.9724671,"about_ca_system_score_codex":0.0009942752,"about_ca_system_score_gemma":0.004544762,"threshold_uncertainty_score":0.99978703},"labels":[],"label_agreement":null},{"id":"W4385737795","doi":"10.3390/v15081716","title":"Components of the Nucleotide Salvage Pathway Increase Frog Virus 3 (FV3) Replication","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inosine; Purine metabolism; Biology; Inosine monophosphate; Adenosine; Purine; Hypoxanthine; Viral replication; Catabolism; Biochemistry; Metabolic pathway; Nucleotide; Adenine nucleotide; Metabolism; Virus; Virology; Gene; Enzyme","score_opus":0.03988718698521944,"score_gpt":0.3106200104703306,"score_spread":0.2707328234851112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385737795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985482,0.00033977267,0.000008277174,0.00015962277,0.00010277811,0.00025405994,0.00016958745,0.00004014122,0.00037752194],"genre_scores_gemma":[0.99821335,0.00027427127,0.000033033757,0.0006216996,0.00011552211,0.000038032103,0.00010691253,0.000035027693,0.00056215975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987695,0.00019018311,0.00021295344,0.00034009467,0.00025411256,0.00023316141],"domain_scores_gemma":[0.9985952,0.000028927068,0.0001009805,0.0011352444,0.000072678355,0.000066996436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000411115,0.00012193935,0.000120711506,0.00006141024,0.0001102132,0.000015484828,0.0004569735,0.00008702051,0.00005316769],"category_scores_gemma":[0.00022877,0.00009464418,0.00010145546,0.00030129353,0.00013426042,0.0000046191276,0.00026942044,0.00009024133,0.0001681054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046350693,0.000065679764,0.003636169,0.0000120438535,0.000041529296,0.0000016803639,0.000029639283,0.00003244122,0.98864627,0.00003064927,0.0045040697,0.002536316],"study_design_scores_gemma":[0.00034512067,0.0002571989,0.01806389,0.000012909969,0.0000064610467,0.0000012341452,0.00002033199,0.000048706013,0.9396704,0.000086033164,0.04138666,0.00010108017],"about_ca_topic_score_codex":0.00035828011,"about_ca_topic_score_gemma":0.00024511138,"teacher_disagreement_score":0.048975904,"about_ca_system_score_codex":0.00001347258,"about_ca_system_score_gemma":0.00007146258,"threshold_uncertainty_score":0.38594776},"labels":[],"label_agreement":null},{"id":"W4385877423","doi":"10.3390/v15081750","title":"Rotavirus Particle Disassembly and Assembly In Vivo and In Vitro","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Instituto de Salud Carlos III","keywords":"Biology; Virology; Cell biology; Viral entry; Viral replication; Rotavirus; Genome; Transcription (linguistics); Reoviridae; RNA silencing; In vitro; Computational biology; RNA; Genetics; Virus; Gene; RNA interference","score_opus":0.16794130072797256,"score_gpt":0.4369509644780869,"score_spread":0.26900966375011437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385877423","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10002035,0.8990725,0.000001093934,0.00011972249,0.000043827367,0.0005860628,0.000064365006,0.000035517878,0.000056508736],"genre_scores_gemma":[0.0040521757,0.9951815,0.000059270216,0.000255692,0.0000804352,0.00017693397,0.000013303737,0.0000437673,0.00013690215],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980135,0.00032937602,0.0005574662,0.0004157674,0.0001321403,0.0005517724],"domain_scores_gemma":[0.9992805,0.00020947479,0.00007837039,0.00020120888,0.000011108331,0.00021931472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054279424,0.00024299657,0.0015565781,0.00026481575,0.000022801176,0.000026448106,0.00007898974,0.00018556071,0.000015142286],"category_scores_gemma":[0.00078844646,0.00018954519,0.000084482876,0.00031995095,0.00011615259,0.00008645024,0.00017091144,0.00039482376,0.000055294306],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048129394,0.00017642567,0.0095905075,0.015396757,0.00011748695,0.0015440515,0.000053328207,2.0986533e-7,0.005967949,0.000036078625,0.0013417756,0.9652941],"study_design_scores_gemma":[0.0018882242,0.00052771124,0.0047529135,0.018283917,0.0001780019,0.00032229503,0.000072405994,0.00006002864,0.00036923314,0.00006730882,0.9731026,0.00037532343],"about_ca_topic_score_codex":0.00062447984,"about_ca_topic_score_gemma":0.00067391904,"teacher_disagreement_score":0.97176087,"about_ca_system_score_codex":0.00007179959,"about_ca_system_score_gemma":0.000080031685,"threshold_uncertainty_score":0.77294284},"labels":[],"label_agreement":null},{"id":"W4385979497","doi":"10.3390/v15081764","title":"Characterizing Risk Factors for Hospitalization and Clinical Characteristics in a Cohort of COVID-19 Patients Enrolled in the GENCOV Study","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; William Osler Health System; Ontario Institute for Cancer Research; Women's College Hospital; York Central Hospital; Schwartz/Reisman Emergency Medicine Institute; Sinai Health System; St. Michael's Hospital; Princess Margaret Cancer Centre; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Coronavirus disease 2019 (COVID-19); Vaccination; Demographics; Ethnic group; Affect (linguistics); Cohort; Young adult; Internal medicine; Pediatrics; Demography; Disease; Immunology; Infectious disease (medical specialty)","score_opus":0.12076208196780146,"score_gpt":0.4756426743330177,"score_spread":0.35488059236521624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385979497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99638647,0.000011212232,0.000041728435,0.00042255875,0.000107312415,0.0028451735,0.00015197597,0.000028780449,0.000004804993],"genre_scores_gemma":[0.9973137,0.001277583,0.00001124707,0.0010706842,0.000053566135,0.0001902527,0.000057187393,0.00001524183,0.000010568155],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977761,0.0003881636,0.0008741544,0.00032527768,0.0003970121,0.00023930408],"domain_scores_gemma":[0.9859125,0.013355836,0.00025196528,0.00025913463,0.00010988769,0.00011068405],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.003012489,0.0001316777,0.00059078616,0.000247137,0.00007861291,0.000016663116,0.0001273217,0.00007783183,0.000008203721],"category_scores_gemma":[0.118593015,0.00008605198,0.00008180866,0.0005381005,0.00013835997,0.00006799361,0.00014159265,0.00022037547,0.0000034229142],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005078039,0.0010122131,0.99410975,0.00018345506,0.00008774397,0.0000105865865,0.0030345332,0.0000018150636,0.00003726287,0.0000047564445,0.000074447285,0.000935625],"study_design_scores_gemma":[0.003749505,0.0014777903,0.99223816,0.00004470604,0.00008486923,2.9211947e-8,0.0011511714,0.0003704216,0.000010459594,0.000052546413,0.000742967,0.000077357705],"about_ca_topic_score_codex":0.00054565136,"about_ca_topic_score_gemma":0.00012532105,"teacher_disagreement_score":0.11558053,"about_ca_system_score_codex":0.00007349901,"about_ca_system_score_gemma":0.00016933793,"threshold_uncertainty_score":0.88883144},"labels":[],"label_agreement":null},{"id":"W4385979746","doi":"10.3390/v15081766","title":"Ecological Interactions among Thrips, Soybean Plants, and Soybean Vein Necrosis Virus in Pennsylvania, USA","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Food and Agriculture; Pennsylvania Soybean Board; U.S. Department of Agriculture","keywords":"Thrips; Biology; Cultivar; Infestation; Overwintering; Agronomy; Resistance (ecology); PEST analysis; Horticulture; Botany","score_opus":0.07278604456972283,"score_gpt":0.3018271865133412,"score_spread":0.22904114194361835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385979746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971752,0.00016103576,1.2777959e-7,0.0005559956,0.00012357968,0.00022789063,0.0006863258,0.00015634719,0.0009134573],"genre_scores_gemma":[0.9970927,0.0017178681,0.000011386073,0.00031948232,0.00012660908,0.0000665062,0.00007353648,0.0000018231909,0.0005900867],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983846,0.00014313062,0.00025403628,0.00041224182,0.0002491599,0.00055683113],"domain_scores_gemma":[0.9987074,0.0010017502,0.00006116694,0.00006360215,0.000023530016,0.00014255171],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003403932,0.00019055202,0.00026584664,0.00007309217,0.00038448296,0.00014578566,0.0002738577,0.00009281849,0.0006351998],"category_scores_gemma":[0.00027639905,0.00007893192,0.000057013982,0.00053674355,0.00021818872,0.00033731826,0.00036430612,0.0002828763,0.0005768172],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068702815,0.00018303444,0.17270994,0.000007910926,0.000031322303,0.00011396096,0.00028824032,0.0000045939387,0.7956928,0.000065939304,0.019538872,0.011294676],"study_design_scores_gemma":[0.000147311,0.0001545537,0.9536075,0.000039822527,0.0000038213543,0.0000057647953,0.000785187,0.00012710011,0.01003327,0.00029769816,0.03457927,0.00021868445],"about_ca_topic_score_codex":0.0047979653,"about_ca_topic_score_gemma":0.078089744,"teacher_disagreement_score":0.78565955,"about_ca_system_score_codex":0.000039870512,"about_ca_system_score_gemma":0.000008459605,"threshold_uncertainty_score":0.93873274},"labels":[],"label_agreement":null},{"id":"W4386091912","doi":"10.3390/v15091787","title":"Correction: Magazine et al. Mutations and Evolution of the SARS-CoV-2 Spike Protein. Viruses 2022, 14, 640","year":2023,"lang":"en","type":"erratum","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institutes of Health","keywords":"Spike (software development); Spike Protein; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Coronavirus disease 2019 (COVID-19); Biology; Genetics; Computational biology; 2019-20 coronavirus outbreak; Computer science; Medicine","score_opus":0.06037057731776519,"score_gpt":0.36646318925822297,"score_spread":0.3060926119404578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386091912","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61385196,0.047206607,0.0008749086,0.015879579,0.1368463,0.018330349,0.0029960757,0.002867441,0.16114676],"genre_scores_gemma":[0.058310706,0.0022262358,0.00051800814,0.69660544,0.009384931,0.0041449447,0.0004893184,0.0016891381,0.22663125],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968583,0.00023646944,0.00059806166,0.00067695946,0.0011743556,0.00045583476],"domain_scores_gemma":[0.99799365,0.00026516078,0.00034822902,0.00086017634,0.0004907649,0.00004200273],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005551863,0.00043876818,0.00067394454,0.00060824765,0.00025643446,0.00007923391,0.00033994674,0.0004726416,0.000028977161],"category_scores_gemma":[0.0018219168,0.00033081003,0.00025188475,0.0013826938,0.00051403965,0.00019551416,0.00032273188,0.0015674839,0.0003570331],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018253902,0.00015239762,0.002599454,0.00037039164,0.00015692387,0.000040206938,0.00010272156,4.2105316e-7,0.1940413,0.00010529928,0.8016608,0.00058758067],"study_design_scores_gemma":[0.00080332527,0.00031137204,0.006792191,0.0012099952,0.00018465312,0.000071455914,0.00010590213,0.0001437946,0.112054594,0.00028193527,0.877764,0.00027682295],"about_ca_topic_score_codex":0.0018732323,"about_ca_topic_score_gemma":0.0020081736,"teacher_disagreement_score":0.6807259,"about_ca_system_score_codex":0.0002883194,"about_ca_system_score_gemma":0.0016373715,"threshold_uncertainty_score":0.9999144},"labels":[],"label_agreement":null},{"id":"W4386091977","doi":"10.3390/v15091789","title":"A Multiplex Quantitative Polymerase Chain Reaction for the Rapid Differential Detection of Subgroups A, B, J, and K Avian Leukosis Viruses","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Avian leukosis; Virology; Polymerase chain reaction; Biology; Multiplex polymerase chain reaction; Multiplex; Real-time polymerase chain reaction; Virus; Inoculation; Molecular biology; Gene; Genetics; Immunology","score_opus":0.06899278019807899,"score_gpt":0.335122818449813,"score_spread":0.26613003825173404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386091977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966278,0.00040594276,0.0016333192,0.00011713652,0.00027851635,0.00067527953,0.00010410971,0.00009555752,0.00006234004],"genre_scores_gemma":[0.9988048,0.00051811896,0.00009991041,0.00014421347,0.00009743582,0.00018290986,0.00001590414,0.000026347589,0.00011037101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992336,0.000050396422,0.0002164378,0.00020301202,0.00012413172,0.00017243203],"domain_scores_gemma":[0.9990993,0.0004993578,0.000102221326,0.00018131119,0.000058984522,0.000058825917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012134304,0.00013846222,0.00021504465,0.00020377741,0.00023413727,0.00001800438,0.00003093883,0.00007292482,0.00006243975],"category_scores_gemma":[0.00016020035,0.00009338153,0.000103841885,0.00030815383,0.00010735054,0.000105236606,0.000021497855,0.00007885052,0.000042381907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011807729,0.0003397546,0.013299967,0.00010388432,0.0005765236,0.0000043372206,0.00068244303,0.000003277797,0.79222375,0.00022279684,0.0001331536,0.19122931],"study_design_scores_gemma":[0.0040502413,0.001226323,0.22433159,0.00010485805,0.00056634675,0.000016873242,0.000889969,0.0027287556,0.7500156,0.0000759199,0.015800199,0.00019328922],"about_ca_topic_score_codex":0.0021473912,"about_ca_topic_score_gemma":0.0004692119,"teacher_disagreement_score":0.21103162,"about_ca_system_score_codex":0.000037413927,"about_ca_system_score_gemma":0.000023515107,"threshold_uncertainty_score":0.38079885},"labels":[],"label_agreement":null},{"id":"W4386255764","doi":"10.3390/v15091827","title":"Adipose Tissues from Human and Bat-Derived Cell Lines Support Ebola Virus Infection","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Ebola virus; Biology; Virology; Virus; Adipose tissue; Viral replication; Disease reservoir","score_opus":0.06732935817931093,"score_gpt":0.37165091728603067,"score_spread":0.30432155910671976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386255764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99588716,0.0002826778,0.000023114897,0.00014313652,0.00017424756,0.00022337155,0.00005488917,0.00033648277,0.0028748913],"genre_scores_gemma":[0.9946309,0.0015372242,0.000052169755,0.000328261,0.00046881023,0.000031601856,0.00011568004,0.000033718006,0.0028016805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990458,0.00004537451,0.00020261915,0.00026354936,0.00019208257,0.0002505653],"domain_scores_gemma":[0.9994663,0.00006838046,0.000040949144,0.00019700114,0.0000737176,0.00015365255],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013756243,0.00013948258,0.0002213015,0.00026625546,0.00021805942,0.0000675665,0.000038522598,0.00010788605,0.0009954422],"category_scores_gemma":[0.000057151774,0.00011830479,0.00005681545,0.00032509604,0.00009165771,0.00016084233,0.00009053657,0.00018638566,0.0010017302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004494126,0.000099384655,0.045060266,0.000044896293,0.00004614853,0.00006030261,0.00019693855,0.0000023953623,0.9394743,0.000018143915,0.008264613,0.00668767],"study_design_scores_gemma":[0.0008512836,0.00053182687,0.2006803,0.000040181534,0.00007490012,0.0000126063205,0.000062558385,0.00008879813,0.7052679,0.00014305128,0.0920985,0.00014806284],"about_ca_topic_score_codex":0.009702145,"about_ca_topic_score_gemma":0.0009203294,"teacher_disagreement_score":0.23420636,"about_ca_system_score_codex":0.000025740084,"about_ca_system_score_gemma":0.000040500126,"threshold_uncertainty_score":0.9999178},"labels":[],"label_agreement":null},{"id":"W4386285402","doi":"10.3390/v15091836","title":"Recurring Trans-Atlantic Incursion of Clade 2.3.4.4b H5N1 Viruses by Long Distance Migratory Birds from Northern Europe to Canada in 2022/2023","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; University of Saskatchewan; Government of Newfoundland and Labrador; Memorial University of Newfoundland; University of Prince Edward Island; Canadian Food Inspection Agency","funders":"Animal and Plant Health Agency; Canadian Food Inspection Agency","keywords":"Influenza A virus subtype H5N1; Clade; Biology; Vulpes; Zoology; Reassortment; Phylogenetic tree; Viral evolution; Geography; Virology; Ecology; Virus; Genome; Coronavirus disease 2019 (COVID-19); Predation; Gene; Genetics","score_opus":0.05175449969418736,"score_gpt":0.3325533360564615,"score_spread":0.2807988363622741,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386285402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99278885,0.005008298,0.00002231948,0.00043850706,0.00022719591,0.00052020495,0.0007000965,0.00010902151,0.00018552662],"genre_scores_gemma":[0.9955353,0.0018212047,0.000040039027,0.0019851024,0.00013209891,0.000067781,0.000050851937,0.000086665976,0.00028091812],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99718994,0.0001527579,0.00058682053,0.00050587376,0.00091682567,0.0006477568],"domain_scores_gemma":[0.99861085,0.00041077926,0.000104164654,0.00046736203,0.00016417813,0.00024266895],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00026425885,0.00029205505,0.00058651017,0.00035374967,0.000120999524,0.000020350479,0.00030415974,0.0000843451,0.00007910989],"category_scores_gemma":[0.0008051052,0.00026339086,0.00006974138,0.0017730147,0.0001281741,0.00011047027,0.00016073725,0.0003871763,0.00012491924],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062123424,0.00012243567,0.7930574,0.000261658,0.00014009279,0.00042511275,0.0012227264,0.0001270838,0.15118481,0.000007117094,0.049330954,0.0034993805],"study_design_scores_gemma":[0.0018748223,0.00029596512,0.5917097,0.001600846,0.00007814216,0.00000219024,0.0009796085,0.00009272328,0.11597916,0.000015660962,0.28681853,0.00055270136],"about_ca_topic_score_codex":0.6829193,"about_ca_topic_score_gemma":0.94099873,"teacher_disagreement_score":0.25807947,"about_ca_system_score_codex":0.00031905994,"about_ca_system_score_gemma":0.0004966542,"threshold_uncertainty_score":0.9999818},"labels":[],"label_agreement":null},{"id":"W4386476162","doi":"10.3390/v15091883","title":"Comparison of Gross Pathology between Classical and Recombinant Lumpy Skin Disease Viruses","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Lymph; Pathology; Pathological; Gross examination; Serous fluid; Strain (injury); Anatomical pathology; Necrosis; Clinical pathology; Medicine; Biology; Immunohistochemistry; Internal medicine","score_opus":0.08369429509259893,"score_gpt":0.3763228579186507,"score_spread":0.29262856282605176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386476162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99586,0.002667265,0.000016798145,0.00026834663,0.0003797982,0.00017445713,0.00034977356,0.00013304755,0.00015053204],"genre_scores_gemma":[0.9985776,0.0004262373,0.000015206834,0.0001727154,0.00004957304,0.000026091242,0.000100828984,0.000021074638,0.0006106571],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983267,0.00032946392,0.00037998718,0.0003496531,0.0000682976,0.00054585584],"domain_scores_gemma":[0.9988561,0.00057896046,0.000108143475,0.00030528798,0.000043732598,0.00010772502],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029360235,0.00017924611,0.0004942884,0.0002207234,0.0001848153,0.000016860384,0.00025128957,0.00021361666,0.00019266599],"category_scores_gemma":[0.00034956008,0.00014880988,0.00008658482,0.0002633809,0.0007407339,0.00010372125,0.00029293966,0.00031664633,0.0011272473],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047962347,0.00024431568,0.6791861,0.00006970211,0.00015244394,0.000057035602,0.00046789102,0.0000012311197,0.2669857,0.00097153225,0.022414831,0.02896958],"study_design_scores_gemma":[0.0012401221,0.0003412297,0.63294667,0.00004269814,0.000053568234,0.000007414482,0.00019626712,0.000006150876,0.23910415,0.00095045334,0.12489056,0.00022071422],"about_ca_topic_score_codex":0.00017290152,"about_ca_topic_score_gemma":0.00005638654,"teacher_disagreement_score":0.10247573,"about_ca_system_score_codex":0.000015917221,"about_ca_system_score_gemma":0.00007590388,"threshold_uncertainty_score":0.9996505},"labels":[],"label_agreement":null},{"id":"W4386749254","doi":"10.3390/v15091921","title":"microRNA-185 Inhibits SARS-CoV-2 Infection through the Modulation of the Host’s Lipid Microenvironment","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; microRNA; Virus; Viral replication; Virology; Coronavirus; Viral entry; Betacoronavirus; Infectivity; Lipid metabolism; Gene; Genetics; Coronavirus disease 2019 (COVID-19); Medicine","score_opus":0.029304618683798984,"score_gpt":0.27724354748667746,"score_spread":0.24793892880287846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386749254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99851453,0.00024958572,0.00021316468,0.0003237144,0.00024489715,0.0002935868,0.000033609125,0.000020052514,0.00010686454],"genre_scores_gemma":[0.9988039,0.0002501435,0.000041897056,0.00053785363,0.00018407543,0.000022399661,0.000046703735,0.000021033533,0.00009195302],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922305,0.000091730064,0.00019763807,0.00020911315,0.0001334644,0.00014499837],"domain_scores_gemma":[0.9993653,0.000012066042,0.00014751885,0.00043442458,0.00002951448,0.000011176079],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000108843065,0.00011625144,0.0000788242,0.000024487683,0.00012426157,0.000016117086,0.00014311992,0.00009217314,0.0000070909578],"category_scores_gemma":[0.0000491273,0.00007733166,0.00010344873,0.00019053098,0.00012462378,0.000009129248,0.0001721722,0.000054130654,0.00004704998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021194572,0.000030511537,0.004887084,0.000015195537,0.000031725685,1.07206354e-7,0.00007729619,0.00055390876,0.98901534,0.000034130953,0.0050674276,0.0002660938],"study_design_scores_gemma":[0.00014788812,0.000024921239,0.1495921,0.000016864742,0.000017591394,0.0000022296886,0.000011281577,0.000051058,0.7952251,0.00006799288,0.0547712,0.000071773145],"about_ca_topic_score_codex":0.00011314132,"about_ca_topic_score_gemma":0.00006192861,"teacher_disagreement_score":0.19379023,"about_ca_system_score_codex":0.000023986635,"about_ca_system_score_gemma":0.000027826873,"threshold_uncertainty_score":0.31534934},"labels":[],"label_agreement":null},{"id":"W4386783033","doi":"10.3390/v15091926","title":"Humoral Responses Elicited after a Fifth Dose of SARS-CoV-2 mRNA Bivalent Vaccine","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; University of Ottawa; Héma-Québec; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Canada Foundation for Innovation; Canada Research Chairs; Fondation du CHUM","keywords":"Bivalent (engine); Virology; Biology; Messenger RNA; Immunology; Genetics; Chemistry; Gene","score_opus":0.1191419140796741,"score_gpt":0.40986040225632187,"score_spread":0.29071848817664775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386783033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973159,0.00083877216,0.000005729949,0.0005064669,0.00013928044,0.00044227054,0.00007304224,0.00026629583,0.0004122342],"genre_scores_gemma":[0.9540875,0.000044282802,0.0000750564,0.045297313,0.00021152722,0.00010424643,0.000005109056,0.000057074616,0.000117909054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99785304,0.00012663525,0.0004443511,0.00039412043,0.0006556989,0.00052615494],"domain_scores_gemma":[0.9987068,0.0003258436,0.00008829961,0.0006497903,0.00018180543,0.000047415055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004475738,0.00023584471,0.00047272188,0.000820244,0.000059312366,0.00002924311,0.0002220257,0.00012270705,0.000059324837],"category_scores_gemma":[0.0006436815,0.00018859933,0.0001795221,0.0013769651,0.000097762975,0.00012158448,0.00019760514,0.00024659422,0.0007393904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005744428,0.00022872466,0.15880133,0.000205302,0.000106396576,0.0005328702,0.0004990935,1.8684673e-7,0.8261502,0.000029855224,0.005795425,0.0019062173],"study_design_scores_gemma":[0.0019865695,0.0005091163,0.14532717,0.00018137631,0.000056372974,0.000021063612,0.00012591227,0.00007434158,0.6800774,0.00008379046,0.17139478,0.00016211785],"about_ca_topic_score_codex":0.00063576334,"about_ca_topic_score_gemma":0.0000970451,"teacher_disagreement_score":0.16559936,"about_ca_system_score_codex":0.00006723171,"about_ca_system_score_gemma":0.00024875376,"threshold_uncertainty_score":0.95036143},"labels":[],"label_agreement":null},{"id":"W4386850506","doi":"10.3390/v15091949","title":"Molecular and Metagenomic Analyses Reveal High Prevalence and Complexity of Viral Infections in French-American Hybrids and North American Grapes","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"Ministry of Agriculture, Food and Rural Affairs; Agriculture and Agri-Food Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Metagenomics; Hybrid; Biology; Virology; Genetics; Computational biology; Evolutionary biology; Gene; Botany","score_opus":0.10465810839398304,"score_gpt":0.3255143066689923,"score_spread":0.22085619827500924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386850506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982229,0.0007617856,4.5865096e-7,0.0001704081,0.000007897299,0.00012257375,0.00066523376,0.000035278328,0.0000135046985],"genre_scores_gemma":[0.9954661,0.0043704445,0.00004275528,0.00006738134,0.000013902355,0.000015064622,0.00001637097,8.806537e-7,0.000007082635],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99908066,0.00013446106,0.00016186619,0.00026337925,0.00013932146,0.00022032541],"domain_scores_gemma":[0.9994665,0.0003085616,0.000084485495,0.000042610332,0.000024756395,0.00007311234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012978404,0.00011640075,0.00029080655,0.000059454956,0.0001303077,0.0000323761,0.00008863832,0.000011146934,0.0000057478387],"category_scores_gemma":[0.000116080075,0.0000532007,0.000025177837,0.0008119521,0.001227459,0.00009414183,0.00016456684,0.00008165495,0.0000017335665],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001151307,0.000029556106,0.64391625,0.000022045442,0.000041566578,0.00000856699,0.000054416225,0.000008366031,0.34587887,0.000037899554,0.00005890407,0.009932072],"study_design_scores_gemma":[0.000062673076,0.0003166576,0.99304545,0.000010694521,0.000020584497,0.0000033125123,0.000099380806,0.00004001201,0.005886898,0.00022790027,0.00018230667,0.00010410911],"about_ca_topic_score_codex":0.021843886,"about_ca_topic_score_gemma":0.013464553,"teacher_disagreement_score":0.34912923,"about_ca_system_score_codex":0.00000816569,"about_ca_system_score_gemma":0.000005271144,"threshold_uncertainty_score":0.98466974},"labels":[],"label_agreement":null},{"id":"W4386917891","doi":"10.3390/v15091971","title":"The Disruption of a Nuclear Export Signal in the C-Terminus of the Herpes Simplex Virus 1 Determinant of Pathogenicity UL24 Protein Leads to a Syncytial Plaque Phenotype","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Canadian Institutes of Health Research; Armand-Frappier Foundation; Yale University","keywords":"Biology; Nuclear export signal; Cytoplasm; Herpes simplex virus; Transfection; Cell nucleus; Molecular biology; Virus; Gene; Cell biology; Genetics","score_opus":0.03256385380210267,"score_gpt":0.3108189444615684,"score_spread":0.2782550906594657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386917891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983896,0.00004300495,0.000009389096,0.00015969815,0.000069337155,0.0010334221,0.00009245693,0.000021702517,0.00018138668],"genre_scores_gemma":[0.9995724,0.00003334852,0.000036179877,0.00013221527,0.00004755865,0.000108008535,0.0000025237932,0.000021283751,0.0000464893],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986429,0.0001711536,0.00045938801,0.00017307556,0.0003370382,0.00021643],"domain_scores_gemma":[0.9990652,0.00017665504,0.00019605507,0.00045765177,0.000065912565,0.000038508584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043128186,0.00014265915,0.00028234735,0.00009501084,0.00013337279,0.0000104861865,0.00020871277,0.000075063224,0.000047414116],"category_scores_gemma":[0.00014495458,0.00006828014,0.00015262952,0.00058174797,0.00018099937,0.000051727264,0.00009045723,0.000114386334,0.000024697132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002067961,0.0018889264,0.033493705,0.00031055568,0.00025468037,0.00019253265,0.0066857464,0.00007510092,0.6431092,0.0011069458,0.0004954548,0.31031916],"study_design_scores_gemma":[0.0023295274,0.0017646955,0.436104,0.0007332171,0.00031187377,0.000058245518,0.0012885917,0.00034698448,0.5208507,0.0004097795,0.035536405,0.0002659655],"about_ca_topic_score_codex":0.0012066412,"about_ca_topic_score_gemma":0.0008494557,"teacher_disagreement_score":0.4026103,"about_ca_system_score_codex":0.000042952368,"about_ca_system_score_gemma":0.00011229384,"threshold_uncertainty_score":0.27843833},"labels":[],"label_agreement":null},{"id":"W4387098923","doi":"10.3390/v15102004","title":"Humoral Responses Elicited by SARS-CoV-2 mRNA Vaccine in People Living with HIV","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Fondation du CHUM; Canada Foundation for Innovation; Canadian Institutes of Health Research; Merck Canada; Mitacs; U.S. Military HIV Research Program; Université de Montréal; Pfizer","keywords":"Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Human immunodeficiency virus (HIV); Biology; Immunology; Messenger RNA; Coronavirus disease 2019 (COVID-19); Medicine; Genetics; Internal medicine; Infectious disease (medical specialty); Gene","score_opus":0.06185544803021341,"score_gpt":0.36827457131682473,"score_spread":0.3064191232866113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387098923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972359,0.00034629655,0.000010331342,0.00054745073,0.00006617909,0.00036051872,0.000030297022,0.00034827553,0.0010547437],"genre_scores_gemma":[0.95684355,0.000024985815,0.000055924396,0.04250037,0.00016391995,0.00008532128,0.000008094123,0.00007099657,0.00024684108],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797,0.00013686788,0.00030729084,0.00043194048,0.0005342394,0.0006196912],"domain_scores_gemma":[0.9986719,0.00065624993,0.000059659258,0.00045424147,0.00011567114,0.000042268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004989871,0.0002330363,0.00041992223,0.00071347586,0.00009403793,0.000058411584,0.00021122955,0.00010537821,0.000027580334],"category_scores_gemma":[0.0012618545,0.0001848564,0.00006349205,0.0020088102,0.000051927236,0.00013746253,0.00013825322,0.0003392796,0.000588098],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009261432,0.00012477838,0.5231908,0.000062475185,0.00003164829,0.00015521748,0.00038407187,4.018794e-7,0.45240408,0.000015968943,0.022364417,0.00033997613],"study_design_scores_gemma":[0.0024467735,0.0005170856,0.30298877,0.00041153547,0.000032392818,0.000030211475,0.0006776573,0.0002642275,0.54307413,0.000020795587,0.14924797,0.0002884408],"about_ca_topic_score_codex":0.0018992285,"about_ca_topic_score_gemma":0.0013548306,"teacher_disagreement_score":0.22020204,"about_ca_system_score_codex":0.000115619296,"about_ca_system_score_gemma":0.0002684121,"threshold_uncertainty_score":0.7559007},"labels":[],"label_agreement":null},{"id":"W4387178755","doi":"10.3390/v15102023","title":"Gen Z and HIV—Strategies for Optimizing the Care of the Next Generation of Adolescents Living with HIV","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"HIV/AIDS Research and Interventions","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Human immunodeficiency virus (HIV); Pandemic; Medicine; Population; Coronavirus disease 2019 (COVID-19); Gerontology; Family medicine; Environmental health","score_opus":0.24934897329192385,"score_gpt":0.41291330917985564,"score_spread":0.1635643358879318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387178755","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00066481106,0.99711627,0.00038932546,0.000029816749,0.00003243046,0.001263389,0.00021093184,0.000014360336,0.00027867395],"genre_scores_gemma":[0.0017152316,0.9965609,0.0002952985,0.00001830906,0.00017030984,0.00015804198,0.00003966736,0.00003930652,0.0010029611],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99910325,0.0001058882,0.00030856603,0.00014652716,0.00019788893,0.00013789469],"domain_scores_gemma":[0.9992176,0.00014121452,0.00019266865,0.00026949728,0.00014396166,0.000035012014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015448465,0.00013454567,0.00048739277,0.00009225779,0.00010227177,0.000042717813,0.00015426829,0.00006525416,0.000015699377],"category_scores_gemma":[0.00018830218,0.000061048166,0.00023696946,0.00018675547,0.00012517726,0.00008241364,0.0000833983,0.00015617152,0.000003895985],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006234662,0.00020231606,0.0010239874,0.24470489,0.0015240611,0.0000048452343,0.0036462885,0.00003285346,0.0012433479,0.0009779002,0.025106287,0.7214709],"study_design_scores_gemma":[0.000990915,0.0019829362,0.00029516802,0.39940545,0.003644996,0.000041828574,0.013400311,0.00075923384,0.000625152,0.000019493618,0.5784132,0.00042130062],"about_ca_topic_score_codex":0.000047226447,"about_ca_topic_score_gemma":0.000095101095,"teacher_disagreement_score":0.7210496,"about_ca_system_score_codex":0.000025458197,"about_ca_system_score_gemma":0.0003106682,"threshold_uncertainty_score":0.2489472},"labels":[],"label_agreement":null},{"id":"W4387230700","doi":"10.3390/v15102031","title":"The International Virus Bioinformatics Meeting 2023","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Lunar and Planetary Institute; Agencia Estatal de Investigación; Fundação para a Ciência e a Tecnologia; Bundesministerium für Gesundheit; Japan Society for the Promotion of Science; Seqirus; Biotechnology and Biological Sciences Research Council; Deutsches Zentrum für integrative Biodiversitätsforschung Halle-Jena-Leipzig; Medical Research Council; Russian Science Foundation; Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft; National Science Foundation","keywords":"Metagenomics; Pandemic; Event (particle physics); Virus; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Data science; Biology; Bioinformatics; Computational biology; Medicine; Computer science; Infectious disease (medical specialty); Genetics","score_opus":0.023972949822028394,"score_gpt":0.27195257759450325,"score_spread":0.24797962777247487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387230700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9004182,0.000028593347,0.00005519694,0.0015261703,0.0021183316,0.00012014515,0.00006345429,0.00020328817,0.09546658],"genre_scores_gemma":[0.9394858,0.0031782652,0.0024210222,0.00817698,0.00072934723,0.000088731686,0.00006911597,0.000066209366,0.045784518],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99955004,0.00000817979,0.0001265519,0.00006973534,0.00010462126,0.00014084241],"domain_scores_gemma":[0.999729,0.00008462507,0.000044778906,0.000111493915,0.000003936445,0.000026203594],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013240337,0.000051374333,0.000033727556,0.000018432389,0.00025854714,0.00011109252,0.0002335692,0.000018567507,0.0014692426],"category_scores_gemma":[0.000055833312,0.00003515815,0.00003069624,0.00016164192,0.00006322439,0.00023499761,0.00023566803,0.00006030136,0.014890223],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008133014,0.000013720978,0.00083224097,0.0000013181159,0.00001790153,0.0000033367455,0.00023920494,0.00023655254,0.6910685,0.00007621708,0.2732581,0.034244806],"study_design_scores_gemma":[0.000046461257,0.0000069418556,0.013070144,0.000005958464,0.0000027700535,0.0000036533029,0.00019469434,0.0011513184,0.018267373,0.00005459319,0.96713793,0.00005814455],"about_ca_topic_score_codex":0.0005011752,"about_ca_topic_score_gemma":0.0005638447,"teacher_disagreement_score":0.69387984,"about_ca_system_score_codex":0.000041490257,"about_ca_system_score_gemma":0.0000033233277,"threshold_uncertainty_score":0.99944353},"labels":[],"label_agreement":null},{"id":"W4387342124","doi":"10.3390/v15102048","title":"A Survey of Henipavirus Tropism—Our Current Understanding from a Species/Organ and Cellular Level","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Tropism; Tissue tropism; Biology; Virology; Hendra Virus; Virulence; Metagenomics; Zoonosis; Phylogenetic tree; Phylogenetics; Virus; Genetics; Gene","score_opus":0.6488986893325889,"score_gpt":0.4442591827299956,"score_spread":0.20463950660259328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387342124","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017554131,0.99292606,0.00013001407,0.00001664357,0.0004434506,0.0005352368,0.004070813,0.00007945853,0.000042891872],"genre_scores_gemma":[0.0049642012,0.99372214,0.000016139065,0.000065021,0.00026551745,0.000022721737,0.0006771739,0.00008509449,0.00018197621],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99793804,0.0003540742,0.00065616716,0.0004938288,0.00026241317,0.0002954675],"domain_scores_gemma":[0.9986137,0.00040191834,0.0003388092,0.0004103198,0.00004157494,0.00019367125],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002416228,0.00042273907,0.0020479674,0.00030419073,0.00008225749,0.000020409314,0.00016190189,0.00029987915,0.000116733376],"category_scores_gemma":[0.0004315711,0.00032841746,0.0002965155,0.0004171679,0.00015172058,0.000056946006,0.00015301237,0.0004232509,0.0001694254],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001210579,0.0019115491,0.04370707,0.12544064,0.0077614295,0.001055988,0.00060935155,4.2258554e-7,0.0007360914,0.0031121948,0.028425315,0.78602934],"study_design_scores_gemma":[0.0023843574,0.00059227285,0.04723163,0.04295573,0.0093350215,0.000019227866,0.00031826796,0.0000060766743,0.000121310004,0.00074981194,0.8950901,0.0011961793],"about_ca_topic_score_codex":0.00074523553,"about_ca_topic_score_gemma":0.00025232104,"teacher_disagreement_score":0.8666648,"about_ca_system_score_codex":0.00011615195,"about_ca_system_score_gemma":0.0003659212,"threshold_uncertainty_score":0.9999168},"labels":[],"label_agreement":null},{"id":"W4387422615","doi":"10.3390/v15102058","title":"Comprehensive Analysis of the Tegument Proteins Involved in Capsid Transport and Virion Morphogenesis of Alpha, Beta and Gamma Herpesviruses","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Government of Saskatchewan; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Viral tegument; Capsid; Biology; Herpes simplex virus; Cell biology; Virology; Golgi apparatus; Herpesviridae; Virus","score_opus":0.11131982595361031,"score_gpt":0.36233631802251026,"score_spread":0.2510164920689,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387422615","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30002245,0.697856,0.0000024153992,0.0000118991275,0.00004792411,0.0015387232,0.00046937214,0.000021703638,0.000029518173],"genre_scores_gemma":[0.021853467,0.97759694,0.00007083204,0.000048065427,0.000018862664,0.00023551175,0.00006520129,0.00005137758,0.000059754067],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998005,0.00016954039,0.00090672687,0.00042715474,0.00029065344,0.0002009237],"domain_scores_gemma":[0.9986851,0.00019250164,0.00044532272,0.0005071793,0.000082685234,0.00008718456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016190774,0.00038898096,0.002394561,0.0008433121,0.00006035818,0.000007770567,0.00009964834,0.0002421767,0.000043900985],"category_scores_gemma":[0.000024712568,0.00024478883,0.00050482637,0.0018102431,0.0002623598,0.000053291464,0.00007240686,0.00018738376,0.0000041631642],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012748799,0.0012495116,0.17448597,0.03550151,0.022635067,0.00011426717,0.00054145354,0.000018411132,0.000440082,0.000088519686,0.000045413464,0.7647523],"study_design_scores_gemma":[0.0018577989,0.00038485587,0.16492079,0.018966068,0.049276464,0.00002109858,0.00020132677,0.000017197504,0.0018454483,0.000018279201,0.76192564,0.00056503253],"about_ca_topic_score_codex":0.004725979,"about_ca_topic_score_gemma":0.002705629,"teacher_disagreement_score":0.7641873,"about_ca_system_score_codex":0.00008378873,"about_ca_system_score_gemma":0.00019926553,"threshold_uncertainty_score":0.9982198},"labels":[],"label_agreement":null},{"id":"W4387573406","doi":"10.3390/v15102079","title":"Contemporaneous SARS-CoV-2-Neutralizing Antibodies Mediated by N-glycan Shields","year":2023,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Semnan University of Medical Sciences and Health Services; Semnan University","keywords":"Epitope; Virology; Antibody; Virus; Biology; Neutralizing antibody; Immune system; Glycan; Immunology; Genetics; Glycoprotein","score_opus":0.21631197528511134,"score_gpt":0.447170898207488,"score_spread":0.23085892292237667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387573406","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023550913,0.9912055,0.00000381385,0.00007735014,0.0005301016,0.0015619269,0.0005070369,0.00080724235,0.0029519256],"genre_scores_gemma":[0.00008313385,0.9692187,0.000015064721,0.029215379,0.0005292628,0.00022998502,0.00017324266,0.00032500783,0.00021025156],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99559355,0.0002979464,0.0011857081,0.0009846764,0.00095336745,0.0009847428],"domain_scores_gemma":[0.99712497,0.0012799265,0.0003871299,0.00094613864,0.0001660136,0.00009584835],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006059376,0.00088913343,0.0032642393,0.00080295297,0.00017699024,0.00015510684,0.00064722454,0.00088920497,0.000019577206],"category_scores_gemma":[0.0009460722,0.0006905048,0.0007953357,0.0012219825,0.00034046144,0.00013220547,0.00025840008,0.0012632589,0.002646307],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005360778,0.00083243626,0.002167334,0.13899012,0.005472372,0.010065298,0.00055345474,2.2866374e-8,0.028395873,0.00025503617,0.36203244,0.45069954],"study_design_scores_gemma":[0.00063860195,0.00024756798,0.0000023086216,0.013312632,0.00074209634,0.00018484527,0.00005158627,0.0000025264308,0.008060645,0.000017544366,0.9761169,0.0006227601],"about_ca_topic_score_codex":0.0026517683,"about_ca_topic_score_gemma":0.00029511823,"teacher_disagreement_score":0.6140845,"about_ca_system_score_codex":0.00022674195,"about_ca_system_score_gemma":0.0010657122,"threshold_uncertainty_score":0.99955463},"labels":[],"label_agreement":null},{"id":"W4387667530","doi":"10.3390/v15102095","title":"The Isolation and Characterization of Bacteriophages Infecting Avian Pathogenic Escherichia coli O1, O2 and O78 Strains","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Canadian Science Centre for Human and Animal Health; Public Health Agency of Canada; Agriculture and Agri-Food Canada; University of Lethbridge; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Université de Montréal; Egg Farmers of Canada; Results Driven Agriculture Research","keywords":"Biology; Virulence; Microbiology; Lytic cycle; Pathogenic Escherichia coli; Bacteriophage; Escherichia coli; Genome; Lysogenic cycle; Myoviridae; Virology; Gene; Genetics; Virus","score_opus":0.015204886332221968,"score_gpt":0.24563158060915205,"score_spread":0.23042669427693008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387667530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99930423,0.000017154225,0.000054608485,0.00013701929,0.00010908258,0.0001274741,0.000038835526,0.000038864087,0.00017271536],"genre_scores_gemma":[0.99901986,0.0004891556,0.000055507862,0.00010608959,0.00003777829,0.000008577602,0.000013051788,0.000010470983,0.00025949796],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994804,0.000040713352,0.00015343263,0.00013997329,0.000055188415,0.00013029572],"domain_scores_gemma":[0.9997067,0.000054768032,0.00010190865,0.00009403937,0.0000065966115,0.00003599603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001262161,0.00007980676,0.00007794832,0.000031243635,0.00025819536,0.00007859622,0.00005033233,0.0000378395,0.00013084736],"category_scores_gemma":[0.00003872711,0.00006322161,0.000019078623,0.00022031603,0.00011808395,0.00032193295,0.0001068911,0.00006167215,0.00003701745],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005616269,0.000009235292,0.013051707,0.0000062026625,0.0000064297574,5.8414844e-7,0.00037243954,0.0000026106118,0.9738757,0.000022873297,0.000012818318,0.012633782],"study_design_scores_gemma":[0.00008505205,0.000036666403,0.95676905,0.0000131975885,0.000008798346,0.0000033173737,0.000097127115,0.00020211987,0.038154304,0.000017053335,0.0045462213,0.00006711876],"about_ca_topic_score_codex":0.0002202269,"about_ca_topic_score_gemma":0.00019261256,"teacher_disagreement_score":0.9437173,"about_ca_system_score_codex":0.000020848998,"about_ca_system_score_gemma":0.0000067307456,"threshold_uncertainty_score":0.25781024},"labels":[],"label_agreement":null},{"id":"W4387705512","doi":"10.3390/v15102103","title":"In Ovo Vaccination with Recombinant Herpes Virus of the Turkey-Laryngotracheitis Vaccine Adjuvanted with CpG-Oligonucleotide Provides Protection against a Viral Challenge in Broiler Chickens","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"U.S. Poultry and Egg Association's Harold E. Ford Foundation; North Carolina State University","keywords":"In ovo; Vaccination; Virology; Biology; Adjuvant; Immune system; Broiler; Viral shedding; Immunology; CpG site; Attenuated vaccine; Virus; Gene expression; Gene; DNA methylation; Embryo","score_opus":0.021463866793837032,"score_gpt":0.2659221104511534,"score_spread":0.24445824365731636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387705512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962336,0.00013911494,0.000013303804,0.00090702524,0.00012068653,0.001717227,0.000022346969,0.00012809888,0.00071861135],"genre_scores_gemma":[0.9984612,0.00037463006,0.00007923024,0.00019385641,0.000046434256,0.0005589095,0.00001457327,0.000056157878,0.00021501913],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984231,0.00013977574,0.00042288905,0.00038302696,0.00028642,0.00034477],"domain_scores_gemma":[0.9992182,0.000054249136,0.00019339887,0.00037536005,0.00009656719,0.000062188825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023231628,0.00026813324,0.0004260272,0.00050028804,0.000105605206,0.000019091558,0.00009356861,0.00012539534,0.00005928148],"category_scores_gemma":[0.000084812884,0.00016055662,0.00006730738,0.0013971924,0.000042243213,0.00034004837,0.00004433054,0.00029400567,0.000033559318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009493628,0.011606168,0.55240065,0.0016043404,0.0011225654,0.0014713755,0.0060867234,0.002036164,0.05104666,0.00094342383,0.00091236527,0.36127594],"study_design_scores_gemma":[0.010373539,0.0019489418,0.9165343,0.0016016237,0.00012277637,0.00007974723,0.0003202177,0.0013629035,0.061120562,0.00026390972,0.005927856,0.00034359976],"about_ca_topic_score_codex":0.0042999233,"about_ca_topic_score_gemma":0.014824976,"teacher_disagreement_score":0.3641337,"about_ca_system_score_codex":0.00018556113,"about_ca_system_score_gemma":0.00012932166,"threshold_uncertainty_score":0.8272685},"labels":[],"label_agreement":null},{"id":"W4387843860","doi":"10.3390/v15102131","title":"Immunogenicity and Tolerability of a SARS-CoV-2 TNX-1800, a Live Recombinant Poxvirus Vaccine Candidate, in Syrian Hamsters and New Zealand White Rabbits","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Immunogenicity; Virology; Vaccination; Medicine; Tolerability; Asymptomatic; Antibody; Immunology; Biology; Pharmacology; Adverse effect; Internal medicine","score_opus":0.06785699969558875,"score_gpt":0.35056654501190876,"score_spread":0.28270954531632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387843860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997068,0.0012153067,0.0000030858455,0.00068573793,0.00012264586,0.00065379543,0.000041524636,0.000075174794,0.00013476716],"genre_scores_gemma":[0.9923998,0.00030487694,0.000047619105,0.007029438,0.000054844528,0.000031342435,0.0000063026455,0.000036328474,0.00008940786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99799716,0.00013683614,0.00053723104,0.0005266712,0.000310229,0.0004918543],"domain_scores_gemma":[0.9989952,0.00024330501,0.00011474439,0.00046015828,0.00010629789,0.00008030067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064119254,0.0002559239,0.0007097348,0.00042487326,0.00006993063,0.00004542062,0.00014441903,0.0001522461,0.000011136967],"category_scores_gemma":[0.00045587556,0.00021489151,0.00006661273,0.0008901565,0.00012274078,0.00017744233,0.00022932426,0.00029321547,0.000033172935],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017719184,0.00014250346,0.67904353,0.00021549467,0.000086101776,0.00011579276,0.0017619829,2.3615435e-7,0.3100783,0.000008454159,0.0020586767,0.004717033],"study_design_scores_gemma":[0.0069992933,0.0007081713,0.7409279,0.00043512462,0.00007208167,0.00007210961,0.0003538133,0.00012327166,0.22976933,0.00033844158,0.019915754,0.0002846995],"about_ca_topic_score_codex":0.03132492,"about_ca_topic_score_gemma":0.009982516,"teacher_disagreement_score":0.08030897,"about_ca_system_score_codex":0.00009377545,"about_ca_system_score_gemma":0.00034368466,"threshold_uncertainty_score":0.97512555},"labels":[],"label_agreement":null},{"id":"W4388161805","doi":"10.3390/v15112171","title":"HIV-1 Remission: Accelerating the Path to Permanent HIV-1 Silencing","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse; National Institute of Neurological Disorders and Stroke; National Institute of Mental Health; National Institutes of Health; National Cancer Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute","keywords":"Provirus; Gene silencing; Latency (audio); Virology; Human immunodeficiency virus (HIV); Biology; Antiretroviral therapy; Medicine; Computational biology; Computer science; Viral load; Genetics; Genome; Gene; Telecommunications","score_opus":0.05757780199956345,"score_gpt":0.3122395210225776,"score_spread":0.25466171902301415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388161805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916504,0.0008617299,0.00001903778,0.0030274105,0.00025471495,0.00030056396,0.000152157,0.00020925875,0.0035247544],"genre_scores_gemma":[0.98940253,0.00012130698,0.00004750267,0.00081792264,0.0000797598,0.00009085453,0.00014039016,0.00001568462,0.009284033],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990357,0.00013025514,0.0001465863,0.00022259698,0.00005610468,0.00040873754],"domain_scores_gemma":[0.9993934,0.00022339342,0.000027156184,0.0002829491,0.000028202017,0.000044903056],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021558261,0.00011512023,0.000120240635,0.000074635434,0.0004821546,0.000034073902,0.00021952031,0.0000635309,0.0010865503],"category_scores_gemma":[0.0001443539,0.000067871624,0.000049146925,0.00023208231,0.00005095591,0.00005420048,0.00018626607,0.00017572363,0.041307703],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055212233,0.000049659957,0.0073258714,0.000012889551,0.00008255164,0.00006152947,0.0018897932,0.000031178977,0.7002766,0.00018251335,0.2796848,0.0103474],"study_design_scores_gemma":[0.00089679006,0.00022872617,0.025686173,0.00012440246,0.000025185313,0.000045383415,0.0026560214,0.000018365712,0.31745195,0.000053178934,0.6525667,0.00024715922],"about_ca_topic_score_codex":0.00008359568,"about_ca_topic_score_gemma":0.00000915482,"teacher_disagreement_score":0.38282463,"about_ca_system_score_codex":0.000038254522,"about_ca_system_score_gemma":0.000060223992,"threshold_uncertainty_score":0.9998266},"labels":[],"label_agreement":null},{"id":"W4388263325","doi":"10.3390/v15112152","title":"A Method to Generate and Rescue Recombinant Adenovirus Devoid of Replication-Competent Particles in Animal-Origin-Free Culture Medium","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; National Research Council Canada","funders":"National Research Council Canada","keywords":"Cell culture; Fetal bovine serum; Limiting; Recombinant DNA; Biology; HEK 293 cells; Adenoviridae; Virology; Genetic enhancement; Molecular biology; Gene; Genetics","score_opus":0.049983922211542686,"score_gpt":0.36928792819580075,"score_spread":0.31930400598425807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388263325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99724305,0.0013146785,0.00011012848,0.00086592534,0.000043274325,0.00031481526,0.000050712657,0.00002616491,0.0000312442],"genre_scores_gemma":[0.99059564,0.0015263626,0.006370632,0.0008093598,0.00013003527,0.00013195701,0.000042562715,0.00004448287,0.00034897335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984309,0.00021738198,0.0002974069,0.00052746694,0.00020276442,0.00032407578],"domain_scores_gemma":[0.99890167,0.00003151988,0.000048045393,0.0007935934,0.00009621175,0.00012893691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008735942,0.00014868456,0.00020254435,0.00014541685,0.000057525755,0.000022560418,0.0003341942,0.000106469066,0.000014795546],"category_scores_gemma":[0.0002496023,0.00013008187,0.000044140557,0.00049890386,0.0000627496,0.0000068214795,0.00027380505,0.00009549579,0.000027667378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009978545,0.00005710354,0.0026846007,0.000023078612,0.00003509987,0.0000067954697,0.00022242987,0.0001720064,0.9890018,0.000115316405,0.0027098772,0.0039740563],"study_design_scores_gemma":[0.00063971186,0.0013880883,0.007661112,0.000021482363,0.000007555654,0.0000048317206,0.00012666608,0.00015955062,0.97345513,0.00023252069,0.016144164,0.00015915741],"about_ca_topic_score_codex":0.00022846235,"about_ca_topic_score_gemma":0.0010938826,"teacher_disagreement_score":0.015546622,"about_ca_system_score_codex":0.000019084795,"about_ca_system_score_gemma":0.00010421781,"threshold_uncertainty_score":0.53045845},"labels":[],"label_agreement":null},{"id":"W4388498008","doi":"10.3390/v15112224","title":"ECOPHAGE: Combating Antimicrobial Resistance Using Bacteriophages for Eco-Sustainable Agriculture and Food Systems","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"Organisation de Coopération et de Développement Économiques; Universitat de València","keywords":"Agriculture; Biotechnology; Business; Agency (philosophy); Sustainable agriculture; Animal husbandry; Food industry; Biology; Food science","score_opus":0.021975903269480776,"score_gpt":0.2582816576627011,"score_spread":0.23630575439322032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388498008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997974,0.00014807093,0.00017114962,0.00008928887,0.00035574104,0.0004753648,0.00017014342,0.00012875865,0.00048752854],"genre_scores_gemma":[0.99234515,0.000061017632,0.0009443153,0.00018894879,0.00013877492,0.00003900569,0.000023899951,0.000029103845,0.0062297783],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99894726,0.00003528021,0.0002173782,0.0003220216,0.000072084884,0.00040596584],"domain_scores_gemma":[0.9995674,0.000079250996,0.00011731377,0.0001458289,0.000020542459,0.000069671136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014645078,0.00016567843,0.00018283374,0.000048451853,0.00052564766,0.00025118593,0.0001289495,0.0000791508,0.000095111674],"category_scores_gemma":[0.000042321888,0.00014528015,0.00005235063,0.00029263398,0.00006869975,0.0005395962,0.00018450707,0.00008905077,0.000077830155],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017228076,0.000024483576,0.00043147907,0.00015877806,0.000020399597,0.00000857886,0.00021198945,0.00050010777,0.9796195,0.00010957182,0.018788852,0.00010905596],"study_design_scores_gemma":[0.002001339,0.00034773437,0.08742355,0.000488153,0.00017391397,0.00012829152,0.004041709,0.0019146171,0.22890224,0.00014859914,0.6730103,0.0014195668],"about_ca_topic_score_codex":0.0005120109,"about_ca_topic_score_gemma":0.0002728226,"teacher_disagreement_score":0.7507172,"about_ca_system_score_codex":0.000109437,"about_ca_system_score_gemma":0.000010135938,"threshold_uncertainty_score":0.59243524},"labels":[],"label_agreement":null},{"id":"W4388636993","doi":"10.3390/v15112246","title":"A Re-Evaluation of African Swine Fever Genotypes Based on p72 Sequences Reveals the Existence of Only Six Distinct p72 Groups","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Animal and Plant Health Inspection Service; Oak Ridge Institute for Science and Education; National Pork Board; Oak Ridge Associated Universities; U.S. Department of Agriculture; U.S. Department of Energy","keywords":"Biology; Genotype; African swine fever virus; Genotyping; Genetics; Virology; Phylogenetic tree; Genome; Gene","score_opus":0.14817272284624297,"score_gpt":0.3213715806014452,"score_spread":0.17319885775520225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388636993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933993,0.00008451629,0.0000021311735,0.0019805362,0.000053422784,0.00024568092,0.00007897766,0.000043732805,0.004111696],"genre_scores_gemma":[0.9990262,0.000047093235,0.000020237258,0.0006725783,0.00009537051,0.000023452214,0.00004104026,9.943777e-7,0.000073039766],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99858,0.0003744051,0.00027269553,0.00022278211,0.00036512976,0.00018501039],"domain_scores_gemma":[0.9987066,0.000865686,0.00020589694,0.00009263522,0.00009240929,0.000036818852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013728894,0.00010670318,0.00020010142,0.000027797514,0.00011430488,0.000011196791,0.00028967482,0.000042178428,0.0004784111],"category_scores_gemma":[0.00074681366,0.0000350345,0.00009075374,0.00062706665,0.00017285658,0.00006242526,0.0000664237,0.000047131372,0.000051551662],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072701793,0.0004265665,0.7587619,0.00015147179,0.00013441773,0.000010059943,0.0004444322,0.0014634246,0.13635464,0.013829149,0.017682198,0.07001476],"study_design_scores_gemma":[0.00008791758,0.00029171174,0.9913175,0.00003921213,0.000061758816,9.0572655e-8,0.0005524098,0.0018451553,0.000493045,0.0027294776,0.0024883535,0.000093364986],"about_ca_topic_score_codex":0.0008325687,"about_ca_topic_score_gemma":0.0012243509,"teacher_disagreement_score":0.23255564,"about_ca_system_score_codex":0.000014905901,"about_ca_system_score_gemma":0.000015061637,"threshold_uncertainty_score":0.5238266},"labels":[],"label_agreement":null},{"id":"W4388906568","doi":"10.3390/v15122285","title":"Comparison of Infectious Bronchitis Virus (IBV) Pathogenesis and Host Responses in Young Male and Female Chickens","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Egg Farmers of Canada; Canadian Poultry Research Council","keywords":"Infectious bronchitis virus; Biology; Pathogenesis; Immune system; Virology; Spleen; Infectious dose; Specific-pathogen-free; Virus; Viral shedding; Avian infectious bronchitis virus; Immunology; Medicine; Disease; Infectious disease (medical specialty); Internal medicine; Coronavirus disease 2019 (COVID-19)","score_opus":0.06015745581157701,"score_gpt":0.30507598229610616,"score_spread":0.24491852648452916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388906568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99781483,0.0011169713,5.5173354e-7,0.000066626286,0.00006648684,0.0001342807,0.00014623757,0.00008685132,0.0005671335],"genre_scores_gemma":[0.9982193,0.0015402215,0.000017452763,0.000041350908,0.000048180627,0.000022317869,0.000003719094,0.0000016395708,0.000105834915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991321,0.00009597973,0.00022451239,0.00023811395,0.000106433385,0.00020288135],"domain_scores_gemma":[0.99942195,0.00038947476,0.000076059376,0.000041577823,0.000028035158,0.00004289573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001751326,0.00012481038,0.00025369978,0.00005894811,0.00023434949,0.00003129807,0.000059533446,0.00006898406,0.000067480134],"category_scores_gemma":[0.00016785954,0.00006055582,0.000031948846,0.0005391821,0.0002370964,0.000098942764,0.00015493341,0.000075632255,0.000025811984],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003142238,0.000041566513,0.6950433,0.000008027785,0.000007851142,0.000003314111,0.000259026,9.658016e-7,0.30129737,0.0000644673,0.00008611762,0.0031565428],"study_design_scores_gemma":[0.000114439514,0.00031595267,0.9813785,0.000024114193,0.0000110701,0.000015549691,0.0011028411,0.000016110205,0.01559458,0.000044743756,0.0012544323,0.000127654],"about_ca_topic_score_codex":0.0038212843,"about_ca_topic_score_gemma":0.02309341,"teacher_disagreement_score":0.28633517,"about_ca_system_score_codex":0.000013208197,"about_ca_system_score_gemma":0.000004460508,"threshold_uncertainty_score":0.9947326},"labels":[],"label_agreement":null},{"id":"W4388971914","doi":"10.3390/v15122308","title":"Molecular and Pathological Characterization of Classical Swine Fever Virus Genotype 2 Strains Responsible for the 2013–2018 Outbreak in Colombia","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Calgary; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Outbreak; Classical swine fever; Genotype; Virology; Hypervariable region; Virus; Biology; Vaccination; Genetics; Antibody; Gene","score_opus":0.06702176355844842,"score_gpt":0.28375495917382126,"score_spread":0.21673319561537285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388971914","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99571794,0.00007148143,0.00002228694,0.0036420552,0.000045897963,0.0002792453,0.00014039475,0.000036057103,0.00004464328],"genre_scores_gemma":[0.9983904,0.00026765477,0.000021480519,0.0010384839,0.00005658834,0.000039174327,0.000076975826,0.0000010454568,0.00010824122],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992907,0.000104853265,0.00017290965,0.00018288479,0.00006737293,0.00018128552],"domain_scores_gemma":[0.99953,0.000320107,0.000057407302,0.000039703944,0.000019066905,0.000033703378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034273183,0.00007829104,0.00014836749,0.000018114488,0.00007550601,0.000014714199,0.00011364173,0.00007523526,0.0000839041],"category_scores_gemma":[0.00015511716,0.000027841255,0.000043321692,0.00024532434,0.00010852443,0.000054580738,0.000095435986,0.00004517409,0.000019220548],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015417534,0.000041809137,0.012742911,0.000006174551,0.000008887903,0.0000056869244,0.000018604864,0.0000066200223,0.9780973,0.0018294535,0.0021099106,0.0049784575],"study_design_scores_gemma":[0.00011741491,0.00020591734,0.9731657,0.0000052700984,0.000013789052,3.372381e-7,0.000051367082,0.00056076556,0.0020459627,0.000615751,0.023149664,0.00006807042],"about_ca_topic_score_codex":0.00013943514,"about_ca_topic_score_gemma":0.0003405951,"teacher_disagreement_score":0.97605133,"about_ca_system_score_codex":0.0000055315727,"about_ca_system_score_gemma":0.0000046420823,"threshold_uncertainty_score":0.11353334},"labels":[],"label_agreement":null},{"id":"W4388977352","doi":"10.3390/v15122305","title":"Co-Infection of Tomato Brown Rugose Fruit Virus and Pepino Mosaic Virus in Grocery Tomatoes in South Florida: Prevalence and Genomic Diversity","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biology; Phylogenetic tree; Outbreak; Virus; Virology; Horticulture; Veterinary medicine; Medicine; Genetics; Gene","score_opus":0.054141805850050684,"score_gpt":0.27056776542065464,"score_spread":0.21642595957060395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388977352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99761343,0.0009206744,9.7591624e-8,0.000040829185,0.000043325304,0.00024889404,0.0010159556,0.000077328434,0.000039464296],"genre_scores_gemma":[0.9935733,0.0062591257,0.000004331285,0.000053940603,0.000037732058,0.00001731185,0.000018146633,0.0000012950271,0.00003478446],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987904,0.00010842534,0.00021868496,0.0003317342,0.00022805233,0.00032270112],"domain_scores_gemma":[0.999453,0.00032703453,0.000072278,0.00005024221,0.000023217772,0.00007420865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034992164,0.0001489693,0.00026424113,0.00010054949,0.00021583916,0.00003795626,0.00014460534,0.0000796142,0.000042355798],"category_scores_gemma":[0.00014408227,0.00007436171,0.000030906762,0.00053440646,0.00016664487,0.0002579827,0.00045163603,0.00012288171,0.000037218237],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006313672,0.000028413131,0.60463667,0.000070172944,0.0000097921375,0.000015691705,0.00064802915,0.0000043496657,0.39294446,0.000008717379,0.00026364153,0.0013069102],"study_design_scores_gemma":[0.00020391752,0.00010004461,0.9701933,0.00006495946,0.000006536197,0.0000033373617,0.00022865261,0.000075996446,0.028456775,0.00012938674,0.00039305398,0.00014403518],"about_ca_topic_score_codex":0.008860863,"about_ca_topic_score_gemma":0.010737177,"teacher_disagreement_score":0.3655566,"about_ca_system_score_codex":0.000037748512,"about_ca_system_score_gemma":0.000009374475,"threshold_uncertainty_score":0.9977392},"labels":[],"label_agreement":null},{"id":"W4389194472","doi":"10.3390/v15122364","title":"Tetherin Restricts SARS-CoV-2 despite the Presence of Multiple Viral Antagonists","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eberhard Karls Universität Tübingen; Leibniz-Gemeinschaft; University of Toronto; Deutsche Forschungsgemeinschaft","keywords":"Tetherin; Biology; Virology; Flow cytometry; Viral replication; Cell biology; Coronavirus; Cell; HEK 293 cells; Cell culture; Molecular biology; Virus; Genetics; Coronavirus disease 2019 (COVID-19)","score_opus":0.10686392024082636,"score_gpt":0.3873178657438367,"score_spread":0.28045394550301034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389194472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99738926,0.0003712201,0.000023796585,0.0003752543,0.00014889581,0.00044819777,0.000027711692,0.00016694512,0.001048717],"genre_scores_gemma":[0.98272544,0.000036794918,0.000088499495,0.016839506,0.00015607808,0.000055619243,0.0000018752552,0.000034751945,0.0000614105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983659,0.00010653665,0.00027354577,0.00028539723,0.0005541721,0.00041449515],"domain_scores_gemma":[0.99850965,0.00066686264,0.00007498939,0.0006206625,0.00010305694,0.000024797324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040712993,0.00015375893,0.00025032545,0.00019429601,0.0001177721,0.000035222878,0.00035763407,0.00008856475,0.000005238418],"category_scores_gemma":[0.0011772797,0.00010164843,0.00010330433,0.0008901425,0.00029213057,0.000110392524,0.00020150683,0.00024941636,0.00038772202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031944865,0.00008190209,0.14783706,0.00008056347,0.000041260013,0.00010161723,0.0003542043,0.000001205832,0.8437289,0.00009824011,0.004506849,0.0028487716],"study_design_scores_gemma":[0.0007152446,0.00018663227,0.028106393,0.00006431549,0.000016977265,0.00001020418,0.00011081534,0.00046109545,0.76732534,0.00013380383,0.20278156,0.00008764298],"about_ca_topic_score_codex":0.001432937,"about_ca_topic_score_gemma":0.00011582944,"teacher_disagreement_score":0.1982747,"about_ca_system_score_codex":0.000037604972,"about_ca_system_score_gemma":0.00020399714,"threshold_uncertainty_score":0.49835113},"labels":[],"label_agreement":null},{"id":"W4389337120","doi":"10.3390/v15122385","title":"Is the Central Nervous System Reservoir a Hurdle for an HIV Cure?","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre Hospitalier de l’Université de Montréal; Montreal Clinical Research Institute; Université de Montréal; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Central nervous system; Life expectancy; Context (archaeology); Medicine; Viral replication; Disease; Human immunodeficiency virus (HIV); Antiretroviral therapy; Immunology; Virus; Viral load; Neurotoxicity; Biology; Virology; Neuroscience; Population; Pathology; Internal medicine","score_opus":0.0769311155396102,"score_gpt":0.3310201495838572,"score_spread":0.25408903404424704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389337120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99168485,0.0016692657,0.000044921926,0.0022792676,0.00048065954,0.0008380177,0.0015481224,0.0003583532,0.0010965221],"genre_scores_gemma":[0.9933474,0.000084877305,0.000019901116,0.0002812096,0.00008010356,0.00025234226,0.00031278603,0.000019022325,0.0056023467],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989459,0.0001502402,0.00012444388,0.00021131226,0.000037577294,0.0005305462],"domain_scores_gemma":[0.9993491,0.00020092749,0.000029873103,0.00034822256,0.00003488789,0.00003696795],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018232863,0.000105237465,0.0001327157,0.000058180172,0.00038490488,0.00002910987,0.0002561927,0.00009026571,0.0001573708],"category_scores_gemma":[0.000041265852,0.00006266974,0.000080505124,0.00015098229,0.000099928424,0.00007206346,0.000066511646,0.000099959245,0.005649356],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054536597,0.00021305561,0.011168802,0.0001075527,0.00056141854,0.000034766806,0.002247359,0.000020954114,0.091537446,0.0038544172,0.88473856,0.004970291],"study_design_scores_gemma":[0.0014796588,0.00048871746,0.015846673,0.00003648386,0.000045743433,0.00002643484,0.0019306595,0.00005145163,0.06334339,0.00013833439,0.9164651,0.00014732768],"about_ca_topic_score_codex":0.00041102504,"about_ca_topic_score_gemma":0.00014563075,"teacher_disagreement_score":0.03172655,"about_ca_system_score_codex":0.000038013346,"about_ca_system_score_gemma":0.000058194557,"threshold_uncertainty_score":0.9951249},"labels":[],"label_agreement":null},{"id":"W4389623660","doi":"10.3390/v15122411","title":"HPV16 Intratypic Variants in Head and Neck Cancers: A North American Perspective","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Single-nucleotide polymorphism; Cervical cancer; Head and neck cancer; Cohort; Biology; Head and neck; Virus; Immune system; Disease; SNP; Oncology; Cancer; Virology; Internal medicine; Medicine; Immunology; Genetics; Gene; Genotype","score_opus":0.06250561958123768,"score_gpt":0.3912881265210459,"score_spread":0.3287825069398082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389623660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914684,0.00043092182,0.0000024910867,0.0011275625,0.000038745893,0.00019788921,0.00002216505,0.00006334004,0.0066484665],"genre_scores_gemma":[0.99734443,0.001041225,0.000041595915,0.0012163188,0.0001557086,0.00003543414,0.0000043519926,0.000014611273,0.00014633474],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991426,0.000027396145,0.000116531344,0.00024071723,0.00019101847,0.0002817352],"domain_scores_gemma":[0.999562,0.00006948146,0.000019509893,0.00013861949,0.00006782466,0.00014251813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008219178,0.000084059386,0.00021207512,0.00018861059,0.000038669863,0.00001912216,0.00005138379,0.00002145465,0.00040645184],"category_scores_gemma":[0.00015430835,0.00007059289,0.000021960625,0.001087176,0.00014678796,0.0000604212,0.000054234435,0.00019606575,0.000105160274],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095151627,0.00007702747,0.93246365,0.00007171126,0.00005232546,0.00020878432,0.0021564146,0.0000089236,0.0002934618,0.00045695913,0.0019478996,0.061311316],"study_design_scores_gemma":[0.0009843801,0.00037910618,0.9937294,0.000018460378,0.000010205933,0.0000052054115,0.0011827303,0.00016693573,0.00010177749,0.00014115252,0.0032044684,0.0000761943],"about_ca_topic_score_codex":0.02250472,"about_ca_topic_score_gemma":0.037480157,"teacher_disagreement_score":0.061265722,"about_ca_system_score_codex":0.00024375108,"about_ca_system_score_gemma":0.00022911682,"threshold_uncertainty_score":0.9840045},"labels":[],"label_agreement":null},{"id":"W4389785001","doi":"10.3390/v15122434","title":"Dietary Vitamin D Mitigates Coronavirus-Induced Lung Inflammation and Damage in Mice","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Vitamin D Research Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Universidade Federal de Minas Gerais; L'Oreal USA","keywords":"Inflammation; Vitamin D and neurology; Coronavirus; Coronavirus disease 2019 (COVID-19); Lung; Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Vitamin; Pneumonia; Immunology; Physiology; Internal medicine; Virology; Disease; Outbreak","score_opus":0.07046427763151487,"score_gpt":0.36246968896762616,"score_spread":0.2920054113361113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389785001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970466,0.00053142925,4.6945837e-7,0.0011955864,0.00007151665,0.0003701524,0.000015120223,0.00014152718,0.00062761543],"genre_scores_gemma":[0.9981233,0.0009466146,0.00008404444,0.00017947335,0.000112157504,0.00006385626,0.000027556865,0.000022012004,0.00044096884],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989094,0.00006710144,0.00021148437,0.00023825496,0.0002674384,0.00030630737],"domain_scores_gemma":[0.9993554,0.0003082991,0.000036221983,0.00015893106,0.000049150553,0.00009200978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003076092,0.00013390057,0.00023464314,0.000306351,0.00008639807,0.000023847144,0.00006587818,0.00006649592,0.000032830972],"category_scores_gemma":[0.0005468814,0.00011459888,0.000028091492,0.0004762129,0.00010915007,0.00020670993,0.00016271816,0.00019164487,0.00013391528],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004561837,0.000035239325,0.18362258,0.000251991,0.00005464335,0.0002348893,0.0009595149,0.0000033943809,0.80462664,0.000026250958,0.002296953,0.007842287],"study_design_scores_gemma":[0.00096712523,0.00011980164,0.8662557,0.00021730985,0.000024864152,0.000006235227,0.00082952407,0.0007016087,0.1298529,0.00006583657,0.0008445255,0.00011459229],"about_ca_topic_score_codex":0.00029539698,"about_ca_topic_score_gemma":0.00035275647,"teacher_disagreement_score":0.6826331,"about_ca_system_score_codex":0.0000564092,"about_ca_system_score_gemma":0.000040616087,"threshold_uncertainty_score":0.46732068},"labels":[],"label_agreement":null},{"id":"W4389893923","doi":"10.3390/v15122447","title":"Pre-Clinical Evaluation of the Antiviral Activity of Epigalocatechin-3-Gallate, a Component of Green Tea, against Influenza A(H1N1)pdm Viruses","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Institute of Infection and Immunity; National Health and Medical Research Council; Medical Research Council; Australian Government","keywords":"Virology; In vitro; Virus; Antiviral drug; Oseltamivir; Influenza A virus; IC50; In vivo; Biology; Epigallocatechin gallate; Influenza A virus subtype H5N1; Microbiology; Pharmacology; Polyphenol; Medicine; Coronavirus disease 2019 (COVID-19); Internal medicine; Infectious disease (medical specialty); Biochemistry; Antioxidant","score_opus":0.2901614655266921,"score_gpt":0.48314834494513537,"score_spread":0.19298687941844328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389893923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99639386,0.00052312796,0.000003936139,0.00013061674,0.0001734125,0.0013473606,0.00017673481,0.00008065169,0.0011702857],"genre_scores_gemma":[0.9989405,0.00030654285,0.00005653736,0.00044974466,0.000090416346,0.000051901476,0.0000044360045,0.000036178186,0.00006371696],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99533916,0.0008427295,0.0011062205,0.00037748346,0.0019352703,0.00039913165],"domain_scores_gemma":[0.99661535,0.0008744217,0.0006834306,0.0009026452,0.00083710405,0.00008705931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036089807,0.00026468403,0.00093117007,0.0003457297,0.000115631825,0.00000802676,0.00039369328,0.00018056424,0.000045254877],"category_scores_gemma":[0.0029116163,0.00018082472,0.0003596673,0.0010384611,0.001026224,0.0001955133,0.00055772124,0.00043663438,0.00004856007],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014841154,0.0007139877,0.5253639,0.00054781523,0.0007250162,0.0000037843051,0.00079694594,0.00027616063,0.44588354,0.0000678759,0.0009366406,0.023200175],"study_design_scores_gemma":[0.002216328,0.0003615224,0.70037985,0.0004107474,0.0002495616,7.886051e-7,0.000109201355,0.0014732647,0.29326922,0.00012842016,0.0012756543,0.0001254657],"about_ca_topic_score_codex":0.002279232,"about_ca_topic_score_gemma":0.00025356398,"teacher_disagreement_score":0.1750159,"about_ca_system_score_codex":0.000093451905,"about_ca_system_score_gemma":0.000500081,"threshold_uncertainty_score":0.73738176},"labels":[],"label_agreement":null},{"id":"W4389894110","doi":"10.3390/v15122441","title":"Galectin-1 Modulates the Fusogenic Activity of Placental Endogenous Retroviral Envelopes","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Galectins and Cancer Biology","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Infectivity; Biology; Cell fusion; Galectin-1; Syncytiotrophoblast; Cell biology; Glycoprotein; Syncytium; Endogenous retrovirus; Viral envelope; Fusion protein; Lipid bilayer fusion; Viral entry; Virology; Microvesicle; Cell culture; Retrovirus; Cell; Galectin; HEK 293 cells; Placenta; Molecular biology; Virus; Microvesicles; Genetics; Recombinant DNA; Gene; Viral replication","score_opus":0.05109715355668744,"score_gpt":0.2623690291544637,"score_spread":0.21127187559777627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389894110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99572855,0.0017873233,0.0000046583973,0.00009460475,0.0007517801,0.00015293108,0.000077602795,0.0001209752,0.0012815525],"genre_scores_gemma":[0.9986964,0.00026088255,0.000004816788,0.00018861023,0.000047026228,0.000022942566,0.000017149263,0.000014243639,0.0007479388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99905694,0.00018246885,0.00016540114,0.00022290627,0.000030608913,0.00034167455],"domain_scores_gemma":[0.9994029,0.0002081737,0.0001041363,0.0002458508,0.000028705563,0.0000102537915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018596301,0.00013610479,0.00021670421,0.000081634134,0.00022020063,0.0000069321327,0.00024318519,0.00015113133,0.00038474536],"category_scores_gemma":[0.0000689059,0.00009112833,0.000097673335,0.00029271777,0.00028420307,0.000048264326,0.00012182911,0.00020301828,0.00054086134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001852204,0.000046137422,0.017618673,0.000008238648,0.00014839644,0.0000028546615,0.00028371863,0.0000071455233,0.97354835,0.00013948073,0.0020437317,0.005968031],"study_design_scores_gemma":[0.00045247783,0.00025861012,0.046684124,0.0000060816465,0.00002689608,0.00006940595,0.00017978394,0.0000024125902,0.92603,0.000094958574,0.026079973,0.00011530047],"about_ca_topic_score_codex":0.0006742008,"about_ca_topic_score_gemma":0.00015254306,"teacher_disagreement_score":0.0475184,"about_ca_system_score_codex":0.000026543647,"about_ca_system_score_gemma":0.00006358706,"threshold_uncertainty_score":0.69518584},"labels":[],"label_agreement":null},{"id":"W4390109636","doi":"10.3390/v16010020","title":"Effective Isolation and Characterization of Mycobacteriophages with the Ability to Lyse Mycobacterium avium subsp. paratuberculosis","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Results Driven Agriculture Research","keywords":"Paratuberculosis; Biology; Microbiology; Feces; Mycobacterium; Culling; Enteritis; Isolation (microbiology); Virology; Bacteria; Herd; Animal science; Genetics","score_opus":0.016841617039930194,"score_gpt":0.29104096931600515,"score_spread":0.27419935227607495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390109636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962224,0.000040887346,0.000054651533,0.0019899877,0.00008320333,0.0012659559,0.00014581227,0.000108119224,0.00008900964],"genre_scores_gemma":[0.99837226,0.00024843885,0.00005783933,0.0006702885,0.00014711644,0.00030981694,0.00011094237,0.000027036844,0.0000562386],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99865174,0.00015765881,0.00022556809,0.00033824102,0.0003224191,0.00030438026],"domain_scores_gemma":[0.998709,0.0003979376,0.000092943,0.0003836486,0.0002159916,0.00020043274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038127007,0.00018683005,0.00032429158,0.00019377666,0.000114854825,0.00006206828,0.000085379936,0.00007822125,0.00009184731],"category_scores_gemma":[0.00024775031,0.00011569395,0.000053073447,0.00083032134,0.00013125126,0.00025783916,0.00009024374,0.00012789057,0.0000908538],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069724984,0.00006282385,0.25242913,0.00019193896,0.00005239981,0.000007403027,0.0005187117,0.0000010425128,0.74368423,0.000017014503,0.00029278436,0.0020452768],"study_design_scores_gemma":[0.00046328438,0.0006852158,0.83975923,0.000096836855,0.00008344587,0.0000075879066,0.00007822551,0.000035883535,0.15702559,0.000005754559,0.0016548382,0.00010411929],"about_ca_topic_score_codex":0.00014012777,"about_ca_topic_score_gemma":0.000027463802,"teacher_disagreement_score":0.5873301,"about_ca_system_score_codex":0.000042308904,"about_ca_system_score_gemma":0.000056792873,"threshold_uncertainty_score":0.47178623},"labels":[],"label_agreement":null},{"id":"W4390412143","doi":"10.3390/v16010057","title":"AAV Vectors Pseudotyped with Capsids from Porcine and Bovine Species Mediate In Vitro and In Vivo Gene Delivery","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Capsid; Adeno-associated virus; Genetic enhancement; Biology; Transgene; Virology; Gene delivery; Vectors in gene therapy; In vivo; Virus; Population; Vector (molecular biology); Gene; Genetics; Medicine; Recombinant DNA","score_opus":0.020418579399781225,"score_gpt":0.26471838027685834,"score_spread":0.24429980087707712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390412143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972927,0.0022276975,0.0000019980446,0.00012136012,0.00003197234,0.00013914373,0.00012863036,0.000016391268,0.000040079925],"genre_scores_gemma":[0.99563915,0.0036176643,0.00008948612,0.00025415453,0.00011351325,0.000018885952,0.000080171274,0.00002789128,0.00015907317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990469,0.0000682972,0.00014743669,0.0003402228,0.00013456181,0.00026258698],"domain_scores_gemma":[0.99962497,0.00003918752,0.000029849902,0.00020628251,0.000024507484,0.00007522589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016557102,0.00014586767,0.00018135678,0.00016727956,0.00003163613,0.000022190601,0.000096536125,0.000086101245,0.000041546966],"category_scores_gemma":[0.000040562238,0.0001247363,0.000014651362,0.00025041614,0.00012251771,0.00000729792,0.00011558255,0.00009152448,0.000007059671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003547382,0.000023024888,0.070400804,0.000008228031,0.000027004025,0.000053713822,0.00007264457,0.000022366989,0.9251952,5.914067e-7,0.00021760316,0.00043140663],"study_design_scores_gemma":[0.001191064,0.00064752187,0.078633875,0.000012729814,0.0000055946225,0.000002994805,0.0000752294,0.00005447949,0.91828364,0.00001903005,0.0009236759,0.00015019633],"about_ca_topic_score_codex":0.000644234,"about_ca_topic_score_gemma":0.006016374,"teacher_disagreement_score":0.008233067,"about_ca_system_score_codex":0.000014165139,"about_ca_system_score_gemma":0.00006106143,"threshold_uncertainty_score":0.50865984},"labels":[],"label_agreement":null},{"id":"W4390467835","doi":"10.3390/v16010067","title":"Reclassification of ASFV into 7 Biotypes Using Unsupervised Machine Learning","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Oak Ridge Institute for Science and Education; Oak Ridge Associated Universities; NERC Biomolecular Analysis Facility; U.S. Department of Agriculture; U.S. Department of Energy","keywords":"Computer science; Artificial intelligence; Biology; Computational biology; Machine learning","score_opus":0.14573575322697338,"score_gpt":0.30546118423802976,"score_spread":0.15972543101105638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390467835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987674,0.00019876305,0.000008590805,0.00044120767,0.00004060452,0.00005712431,0.000007996683,0.00011159445,0.00036675984],"genre_scores_gemma":[0.9992489,0.00022179703,0.00008867694,0.0001758497,0.000067713954,0.0000027567023,0.00006509659,7.1502575e-7,0.00012849631],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994368,0.00009172263,0.00014143901,0.00014075912,0.00006742396,0.000121834295],"domain_scores_gemma":[0.99971926,0.0001381447,0.00006444058,0.000027342776,0.000020204177,0.000030608102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021107362,0.00006082721,0.000107435546,0.000021829377,0.00011620445,0.0000094376455,0.000103721475,0.000040298397,0.0002707988],"category_scores_gemma":[0.00014099885,0.000024019222,0.0000433338,0.00040099875,0.00004175475,0.00006913647,0.00006199925,0.000041507727,0.000117994525],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031311007,0.000020908721,0.18350157,0.000012504283,0.000012503213,9.04833e-7,0.00003810649,0.00008180542,0.7912498,0.0006982643,0.00040750133,0.023944821],"study_design_scores_gemma":[0.00010527033,0.00022143469,0.9106732,0.00002760578,0.00003286826,2.7457887e-7,0.0005771389,0.01883576,0.0064264764,0.0015960963,0.06131604,0.00018781568],"about_ca_topic_score_codex":0.0010107198,"about_ca_topic_score_gemma":0.000115168026,"teacher_disagreement_score":0.7848233,"about_ca_system_score_codex":0.0000067823153,"about_ca_system_score_gemma":0.0000021866865,"threshold_uncertainty_score":0.2965057},"labels":[],"label_agreement":null},{"id":"W4390881837","doi":"10.3390/v16010117","title":"Prevalence of Hepatitis B in Canadian First-Time Blood Donors: Association with Social Determinants of Health","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Queen's University; Canadian Blood Services; University of Ottawa","funders":"","keywords":"Medicine; Hepatitis B; Demography; Logistic regression; Ethnic group; Immigration; Public health; Hepatitis C; Hepatitis; Population; Chronic hepatitis; Immunology; Environmental health; Internal medicine; Pathology","score_opus":0.022851173389646758,"score_gpt":0.2979857090171002,"score_spread":0.27513453562745344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390881837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965309,0.0018801147,9.759191e-7,0.0005729693,0.00006171259,0.00028855063,0.00029299638,0.000025587826,0.0003461939],"genre_scores_gemma":[0.99732167,0.002029603,0.000111383386,0.00020738559,0.000050777875,0.000022632039,0.0000031299196,0.00001790401,0.00023552026],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99883556,0.00006195647,0.0003801361,0.00016859257,0.00025814306,0.0002956372],"domain_scores_gemma":[0.9994767,0.00012453028,0.00014459963,0.00009865741,0.00008082497,0.00007471504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038366407,0.00010162074,0.00038874263,0.00022878619,0.000058280035,0.0000074638765,0.000054620526,0.00006764257,0.00010342488],"category_scores_gemma":[0.00023772642,0.0000893237,0.00003872559,0.00030583938,0.000056430308,0.00009689865,0.000017422099,0.000095892654,0.00002249468],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013632635,0.000055791676,0.99354875,0.0013588157,0.0000767455,0.000035512738,0.0019888778,6.8756015e-7,0.0001813696,0.000023411954,0.0008551432,0.0018612337],"study_design_scores_gemma":[0.00034314345,0.00038709276,0.9926757,0.0014477647,0.00008956187,0.000004533966,0.000017847116,0.0000708189,0.003608342,0.000013749942,0.0012607782,0.00008066778],"about_ca_topic_score_codex":0.8429714,"about_ca_topic_score_gemma":0.9326674,"teacher_disagreement_score":0.08969601,"about_ca_system_score_codex":0.00040685994,"about_ca_system_score_gemma":0.00087699963,"threshold_uncertainty_score":0.3642515},"labels":[],"label_agreement":null},{"id":"W4390910363","doi":"10.3390/v16010129","title":"Chloride Intracellular Channel Protein 1 (CLIC1) Is a Critical Host Cellular Factor for Influenza A Virus Replication","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; University of Manitoba; Research Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Host factor; Host factors; Host (biology); Replication (statistics); Intracellular; Virology; Virus; Viral replication; Influenza A virus; Cell biology; Biology; Chemistry; Genetics","score_opus":0.16385128621261222,"score_gpt":0.42806935231979815,"score_spread":0.2642180661071859,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390910363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95663893,0.024222344,0.004955251,0.0053157047,0.0004110187,0.005199134,0.0015458595,0.0009666018,0.0007451281],"genre_scores_gemma":[0.9855599,0.00029900594,0.0012293922,0.007385584,0.0014554491,0.002652398,0.00002578264,0.00017901685,0.0012134851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99703884,0.000054357526,0.00057374226,0.00092919957,0.00064056634,0.0007632789],"domain_scores_gemma":[0.99788874,0.00045542532,0.000057626108,0.0009429079,0.00035939555,0.00029591078],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004903354,0.00036855266,0.00049656554,0.0003682323,0.00026937696,0.00018825337,0.00021787081,0.00022779673,0.00038650198],"category_scores_gemma":[0.0035451953,0.0003104691,0.00025351948,0.00048171764,0.00030605888,0.00037584646,0.00014770764,0.00047903392,0.0007802926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091618573,0.00020127615,0.00014842996,0.0015997767,0.0002829788,0.00008591494,0.0011758541,7.8619894e-7,0.984965,0.0036095688,0.0042381394,0.0027760342],"study_design_scores_gemma":[0.00051940454,0.00041713112,0.00032178208,0.00039144256,0.000089359375,0.000008181283,0.00009880886,0.00075117935,0.6727922,0.00046296386,0.32390946,0.00023805695],"about_ca_topic_score_codex":0.00020032279,"about_ca_topic_score_gemma":0.00000951658,"teacher_disagreement_score":0.31967133,"about_ca_system_score_codex":0.00021398341,"about_ca_system_score_gemma":0.00023701564,"threshold_uncertainty_score":0.99999774},"labels":[],"label_agreement":null},{"id":"W4391384987","doi":"10.3390/v16020227","title":"The Rapidly Changing Patterns in Bacterial Co-Infections Reveal Peaks in Limited Gram Negatives during COVID-19 and Their Sharp Drop Post-Vaccination, Implying Potential Evolution of Co-Protection during Vaccine–Virus–Bacterial Interplay","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Antibiotic Use and Resistance","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Medicine; Vaccination; Case fatality rate; Pandemic; Staphylococcus aureus; Concomitant; Gram; Respiratory system; Virus; Mortality rate; Coronavirus disease 2019 (COVID-19); Internal medicine; Virology; Epidemiology; Biology; Bacteria; Infectious disease (medical specialty)","score_opus":0.01097221979406222,"score_gpt":0.2703854626138904,"score_spread":0.2594132428198282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391384987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959201,0.0012367909,0.0007197326,0.00021166343,0.0011283223,0.00047005634,0.00020185397,0.0000996344,0.000011847703],"genre_scores_gemma":[0.99911606,0.0004959152,0.0000031038928,0.00002292104,0.00016911446,0.0000308812,0.00006816322,0.000024188135,0.000069661735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839896,0.00035396224,0.0004807997,0.0003607031,0.000039867216,0.00036571],"domain_scores_gemma":[0.999435,0.00017265834,0.00015779033,0.00016105894,0.000045798683,0.000027690396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036096972,0.00021539461,0.00026570327,0.00061630906,0.00056526496,0.000089208224,0.00012729992,0.00020992073,0.0001572884],"category_scores_gemma":[0.00018653816,0.00016337691,0.000078075806,0.00034764054,0.000079191384,0.00034221428,0.00008535056,0.00034804456,0.000011255303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009888407,0.00007431977,0.013465152,0.0002679851,0.00010399802,0.000009617626,0.0031184084,0.00001715422,0.9811734,0.000068097965,0.000019978099,0.00069306616],"study_design_scores_gemma":[0.0026236514,0.00022401246,0.4843259,0.0005778192,0.000034231758,0.00014543576,0.0036394326,0.00010384283,0.50734097,0.00007853315,0.0006053661,0.00030081056],"about_ca_topic_score_codex":0.0013793156,"about_ca_topic_score_gemma":0.0024182035,"teacher_disagreement_score":0.47383243,"about_ca_system_score_codex":0.00022474409,"about_ca_system_score_gemma":0.00008853836,"threshold_uncertainty_score":0.6662317},"labels":[],"label_agreement":null},{"id":"W4391403600","doi":"10.3390/v16020212","title":"Human Betacoronavirus OC43 Interferes with the Integrated Stress Response Pathway in Infected Cells","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Integrated stress response; Phosphorylation; Biology; Downregulation and upregulation; eIF2; Cell biology; Translation (biology); Biochemistry; Messenger RNA","score_opus":0.040724338589716844,"score_gpt":0.3425475488095997,"score_spread":0.30182321021988284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391403600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643064,0.0008763652,0.000048436006,0.001729085,0.000092278286,0.0003368635,0.00011916877,0.00014661784,0.00022053081],"genre_scores_gemma":[0.9975929,0.0000765742,0.00005119392,0.001415205,0.00008585113,0.00006671118,0.000024793273,0.00003368723,0.0006530566],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998068,0.0006888332,0.00028428802,0.0003169857,0.00018813477,0.00045378503],"domain_scores_gemma":[0.99925643,0.00022740202,0.000032426382,0.00029567897,0.000058164187,0.00012988233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006102134,0.00019263175,0.00032315598,0.00026512134,0.00006392783,0.00007070464,0.00017061309,0.00008491487,0.00034417317],"category_scores_gemma":[0.00028304727,0.000102771555,0.00006549405,0.00037887326,0.000282498,0.00012108994,0.0000861667,0.0006315214,0.0001301564],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006512579,0.00020242423,0.045025967,0.00014844075,0.00017629273,0.0018571928,0.00059262797,0.000027183294,0.9252232,0.00015438593,0.011493232,0.008586511],"study_design_scores_gemma":[0.0042361915,0.011985191,0.42735216,0.004096475,0.00008757503,0.00030078177,0.0018439175,0.0005153298,0.23624355,0.00011385256,0.31266668,0.00055829115],"about_ca_topic_score_codex":0.0009324074,"about_ca_topic_score_gemma":0.0021361092,"teacher_disagreement_score":0.6889796,"about_ca_system_score_codex":0.000104526094,"about_ca_system_score_gemma":0.00014841971,"threshold_uncertainty_score":0.4190902},"labels":[],"label_agreement":null},{"id":"W4391434212","doi":"10.3390/v16020229","title":"A Canadian Survey of Research on HIV-1 Latency—Where Are We Now and Where Are We Heading?","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Agencia Nacional de Investigación y Desarrollo; McGill University","keywords":"Viremia; Human immunodeficiency virus (HIV); Latency (audio); Virology; Virus latency; Cart; Biology; Clinical trial; Immunology; Medicine; Viral replication; Virus; Bioinformatics; Computer science; History","score_opus":0.1092878561836333,"score_gpt":0.37023828810725085,"score_spread":0.26095043192361755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391434212","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79655564,0.17566931,0.0000014410836,0.01776982,0.00038444626,0.00050935114,0.006429263,0.00009370718,0.0025870278],"genre_scores_gemma":[0.9684224,0.020441797,0.00000570174,0.00005649167,0.00002419489,0.00003502359,0.000094857336,0.000025473357,0.010894065],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982263,0.0005419759,0.00016870518,0.0003690551,0.00008670836,0.00060729065],"domain_scores_gemma":[0.99880236,0.00062633364,0.000028524928,0.0002825622,0.0001334404,0.0001268005],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00053661806,0.00015563029,0.00025706092,0.00044450854,0.00023198898,0.000051794425,0.00017636041,0.00021131709,0.0012595787],"category_scores_gemma":[0.00007164997,0.0001202105,0.000042183176,0.00039257342,0.00027638878,0.00006995449,0.00006867622,0.0004935889,0.0037521182],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023736095,0.00014201287,0.41498336,0.0003624685,0.00040935635,0.00042361044,0.00042499186,0.0000017991371,0.006117597,0.00030523652,0.57351875,0.0030734467],"study_design_scores_gemma":[0.00075644883,0.00062199566,0.14273146,0.0016984377,0.000020081507,0.00003720843,0.0008670229,0.000004338543,0.01055764,0.00015742525,0.8423289,0.00021903972],"about_ca_topic_score_codex":0.1571995,"about_ca_topic_score_gemma":0.8292771,"teacher_disagreement_score":0.6720776,"about_ca_system_score_codex":0.00015774733,"about_ca_system_score_gemma":0.00043718863,"threshold_uncertainty_score":0.9996534},"labels":[],"label_agreement":null},{"id":"W4391574986","doi":"10.3390/v16020257","title":"Improved Viability of Spray-Dried Pantoea agglomerans for Phage-Carrier Mediated Control of Fire Blight","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Public Health Agency of Canada; Wilfrid Laurier University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Pantoea agglomerans; Fire blight; Erwinia; Microbiology; Biology; Pantoea; Bacteria; Food science; Pseudomonas","score_opus":0.013201701932256673,"score_gpt":0.2632020963845448,"score_spread":0.2500003944522881,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391574986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945792,0.00026743123,0.00144768,0.00022362574,0.0004420293,0.00053636055,0.002151444,0.00005097019,0.00030125753],"genre_scores_gemma":[0.9990717,0.000027409802,0.00033720388,0.0002130419,0.000031749878,0.000042892276,0.000018151672,0.000016580481,0.0002412547],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991365,0.000032231816,0.00032808803,0.00024086394,0.00008493124,0.00017739994],"domain_scores_gemma":[0.99937195,0.00025733706,0.0000879892,0.0002049528,0.000019264415,0.000058521306],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014905071,0.0001179366,0.000225873,0.000028596187,0.000045996287,0.000020897034,0.0001368959,0.00006827726,0.003197204],"category_scores_gemma":[0.000093632756,0.00009674539,0.00014661772,0.00017494017,0.00019505103,0.00025437635,0.000039433005,0.00007615008,0.000050738538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009410516,0.00009426215,0.0005157694,0.00007066122,0.00005679099,9.4372e-7,0.00024883763,0.000009534254,0.9949907,0.00001900296,0.0009999152,0.002899459],"study_design_scores_gemma":[0.00064413354,0.00017776017,0.0068772375,0.000042645723,0.00009854904,0.0000021698422,0.000046016055,0.0017426601,0.8633122,0.000045368535,0.12686902,0.00014222109],"about_ca_topic_score_codex":0.0005232812,"about_ca_topic_score_gemma":0.0002350588,"teacher_disagreement_score":0.1316785,"about_ca_system_score_codex":0.00004567769,"about_ca_system_score_gemma":0.00002087931,"threshold_uncertainty_score":0.997714},"labels":[],"label_agreement":null},{"id":"W4391844020","doi":"10.3390/v16020298","title":"Association between Human Papillomavirus 16 Viral Load in Pregnancy and Preterm Birth","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research","keywords":"Viral load; Pregnancy; Medicine; Obstetrics; Logistic regression; Gestation; Confidence interval; Premature birth; Immunology; Internal medicine; Biology; Human immunodeficiency virus (HIV); Genetics","score_opus":0.05531917556934679,"score_gpt":0.3705665295392587,"score_spread":0.31524735396991194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391844020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9585708,0.013539994,0.0000055404435,0.00039171273,0.000084348314,0.00033386875,0.00005389186,0.00011626433,0.026903626],"genre_scores_gemma":[0.9959243,0.001024343,0.000010052087,0.00019195238,0.00027593708,0.000031067728,0.000013242686,0.000019152947,0.0025099406],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895364,0.000038916176,0.0001767229,0.00023323494,0.00035982789,0.00023764465],"domain_scores_gemma":[0.99961233,0.000115282935,0.000019557976,0.000119412114,0.00004118087,0.00009221528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019089655,0.000093151924,0.00019896193,0.00012092375,0.000043777014,0.0000683052,0.00004795891,0.000095008,0.0009105802],"category_scores_gemma":[0.000091267626,0.00007704005,0.00004053549,0.00018977902,0.000033357148,0.00016018229,0.00005350435,0.00025924586,0.00006298017],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006335989,0.00004014966,0.8515639,0.0005874676,0.000093838884,0.00005633093,0.00033332984,8.3876735e-8,0.0032289384,0.0004634627,0.0010638566,0.14250532],"study_design_scores_gemma":[0.0011446677,0.00034706932,0.9404333,0.0004899482,0.00006882903,0.0000019748684,0.00002191317,0.000014891995,0.0063275644,0.001354926,0.049660556,0.00013433109],"about_ca_topic_score_codex":0.0006995768,"about_ca_topic_score_gemma":0.0005166868,"teacher_disagreement_score":0.14237098,"about_ca_system_score_codex":0.0004358616,"about_ca_system_score_gemma":0.00008389138,"threshold_uncertainty_score":0.9970215},"labels":[],"label_agreement":null},{"id":"W4391883050","doi":"10.3390/v16020303","title":"Association between the Mode of Delivery and Vertical Transmission of Human Papillomavirus","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Mary's Hospital Centre; Centre Hospitalier de l’Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; Université de Sherbrooke; McGill University Health Centre; Université de Montréal","funders":"Canadian Institutes of Health Research; Institut de recherche, Centre universitaire de santé McGill","keywords":"Medicine; Caesarean section; Obstetrics; Human papillomavirus; Vaginal delivery; Confidence interval; Pregnancy; Logistic regression; Transmission (telecommunications); Gynecology; Internal medicine; Biology","score_opus":0.05739143980587938,"score_gpt":0.38491437560414715,"score_spread":0.32752293579826774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391883050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99466306,0.002496334,0.00005191631,0.00056746235,0.000015516092,0.00009567307,0.000017375236,0.000015218822,0.0020774484],"genre_scores_gemma":[0.99920887,0.00051899184,0.00001116356,0.00008010577,0.0000781365,0.0000027395567,0.0000032743062,0.0000064060246,0.00009029135],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993979,0.000029433648,0.00014019405,0.000081439895,0.00026657502,0.00008448879],"domain_scores_gemma":[0.9995864,0.00023239854,0.0000100928055,0.000073518364,0.000050980052,0.00004662693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012440064,0.000040790103,0.00013874033,0.000040773462,0.000028865315,0.0000077137765,0.00003517334,0.000050616716,0.00036108808],"category_scores_gemma":[0.000037315378,0.000024262701,0.000043936125,0.00010052544,0.000055618613,0.000034996167,0.000018433893,0.00011725374,0.000004035505],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036533814,0.000119216595,0.2307343,0.0013577505,0.0004634787,0.000009225817,0.0011496767,0.0000018486115,0.4489874,0.0017994469,0.0025842097,0.31242812],"study_design_scores_gemma":[0.00065717543,0.0004661274,0.5968059,0.000149865,0.00035013928,9.630687e-7,0.000050905528,0.00038855328,0.38981456,0.0012707447,0.009983028,0.00006205779],"about_ca_topic_score_codex":0.00040072843,"about_ca_topic_score_gemma":0.000013152221,"teacher_disagreement_score":0.3660716,"about_ca_system_score_codex":0.000031436524,"about_ca_system_score_gemma":0.00004038724,"threshold_uncertainty_score":0.39536613},"labels":[],"label_agreement":null},{"id":"W4391930766","doi":"10.3390/v16020307","title":"Identification and Genomic Characterization of Bovine Boosepivirus A in the United States and Canada","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"U.S. Food and Drug Administration","keywords":"GenBank; Biology; Accession number (library science); Strain (injury); Identification (biology); Genetics; Host (biology); Pathogenicity; Virology; Gene; Microbiology; Botany","score_opus":0.03187300169819065,"score_gpt":0.25288635046817837,"score_spread":0.2210133487699877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391930766","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977733,0.000608235,4.010961e-7,0.0009511448,0.00001785227,0.000090780675,0.0005438745,0.000007762061,0.000006660397],"genre_scores_gemma":[0.996412,0.003214857,5.516575e-7,0.00021368878,0.000018926286,0.00000783349,0.00010800543,3.0390459e-7,0.0000238629],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996016,0.000050343315,0.00009358766,0.000090185065,0.00009043579,0.00007384915],"domain_scores_gemma":[0.9997152,0.00022260258,0.000019166242,0.00001681257,0.0000128541,0.000013373798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015316078,0.000041001163,0.00005320289,0.000018173854,0.000051131978,0.000055048826,0.000056965422,0.000011660048,0.000008839918],"category_scores_gemma":[0.00003148909,0.0000133897365,0.000004433797,0.0001835267,0.00004204759,0.00006822573,0.00002987737,0.00003695223,9.462575e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008785005,0.000005391289,0.0045982543,0.000014952822,0.0000052499563,0.0000032517828,0.00015807197,3.1793957e-7,0.99084705,0.00006458444,0.00025972258,0.00403438],"study_design_scores_gemma":[0.000029032992,0.00004150731,0.93175405,0.000026929398,0.0000048882716,0.0000028195393,0.00034377942,0.00041546873,0.022679035,0.00008670142,0.044561055,0.000054727803],"about_ca_topic_score_codex":0.3997702,"about_ca_topic_score_gemma":0.5516797,"teacher_disagreement_score":0.968168,"about_ca_system_score_codex":0.000010744117,"about_ca_system_score_gemma":0.000009830141,"threshold_uncertainty_score":0.60422677},"labels":[],"label_agreement":null},{"id":"W4391962787","doi":"10.3390/v16030318","title":"Oral Fluids for the Early Detection of Classical Swine Fever in Commercial Level Pig Pens","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Manitoba; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Classical swine fever; Viremia; Pestivirus; Herd; Virulence; Outbreak; Veterinary medicine; Virus; Virology; Biology; Medicine; Flaviviridae; Viral disease","score_opus":0.1679396783472503,"score_gpt":0.31904370950069316,"score_spread":0.15110403115344287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391962787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966437,0.00031537222,0.00017988675,0.002319757,0.00016751896,0.00016289424,0.000053089712,0.00003052285,0.00012726245],"genre_scores_gemma":[0.9989861,0.000030644216,0.000015817825,0.0004898933,0.00024358758,0.00002387002,0.000006436994,7.041793e-7,0.00020290706],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99948627,0.000051015122,0.00013924902,0.00012914785,0.000057733945,0.00013656243],"domain_scores_gemma":[0.99946123,0.00046352283,0.000017400878,0.000023718434,0.000012966815,0.000021128577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021680456,0.00006287235,0.00010752495,0.000011386431,0.00006629238,0.000021803839,0.00011061909,0.000047201494,0.00010545375],"category_scores_gemma":[0.000075084215,0.000019457146,0.00007834623,0.00016168455,0.000064315565,0.000059403465,0.000046098852,0.000059343543,0.00002383293],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038715097,0.00012133692,0.054394633,0.000035862355,0.000058914477,0.000004439874,0.00008955992,0.000007833003,0.54189175,0.01021534,0.012067828,0.38072535],"study_design_scores_gemma":[0.00006755538,0.00017927117,0.90680724,0.000009646776,0.000021128602,2.0279967e-7,0.000051315026,0.0007053455,0.00089811196,0.0007549803,0.09044945,0.000055757253],"about_ca_topic_score_codex":0.0011675315,"about_ca_topic_score_gemma":0.003532635,"teacher_disagreement_score":0.8524126,"about_ca_system_score_codex":0.000009417444,"about_ca_system_score_gemma":0.000002879389,"threshold_uncertainty_score":0.19712932},"labels":[],"label_agreement":null},{"id":"W4391997321","doi":"10.3390/v16030326","title":"Differential Impact of Massachusetts, Canadian 4/91, and California (Cal) 1737 Genotypes of Infectious Bronchitis Virus Infection on Lymphoid Organs of Chickens","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Egg Farmers of Canada","keywords":"Infectious bronchitis virus; Biology; Bursa of Fabricius; Virology; Genotype; Virus; Immune system; Lymphatic system; Spleen; Avian infectious bronchitis; Avian infectious bronchitis virus; Viral replication; Specific-pathogen-free; Immunology; Pathology; Medicine; Coronavirus disease 2019 (COVID-19); Gene; Infectious disease (medical specialty)","score_opus":0.016597541472507978,"score_gpt":0.24458638347292658,"score_spread":0.2279888420004186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391997321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996717,0.0004760826,0.0000070832916,0.000037283764,0.00016356815,0.00014505434,0.0017093198,0.0000579317,0.00068668346],"genre_scores_gemma":[0.9988722,0.0009324536,0.000005142918,0.000026886673,0.000116946794,0.0000068083273,0.000020106823,0.0000033538768,0.000016064001],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990567,0.000060723614,0.0002892567,0.0002253781,0.00014753935,0.00022041415],"domain_scores_gemma":[0.99949664,0.00017681852,0.000099438745,0.000059256057,0.000069275644,0.00009856974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007096758,0.00017996381,0.00029641658,0.000105888874,0.00015186341,0.000025713247,0.00007081019,0.00011502301,0.00057801744],"category_scores_gemma":[0.00007806463,0.00007938726,0.0001490701,0.00040240356,0.00019886649,0.00008263569,0.000048008624,0.00010358498,0.000022705208],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043181335,0.00010831791,0.49127454,0.000051046234,0.00019922026,0.0000022833426,0.00013967224,0.000025020689,0.49650088,0.00030607462,0.0004167628,0.010933006],"study_design_scores_gemma":[0.00013722507,0.0014279257,0.9234152,0.00009568978,0.00008939878,0.000018769206,0.000034426463,0.000042851014,0.07080804,0.0002642615,0.0034781129,0.00018812188],"about_ca_topic_score_codex":0.51740384,"about_ca_topic_score_gemma":0.45473132,"teacher_disagreement_score":0.43214065,"about_ca_system_score_codex":0.0001203257,"about_ca_system_score_gemma":0.000057881007,"threshold_uncertainty_score":0.63288856},"labels":[],"label_agreement":null},{"id":"W4392018925","doi":"10.3390/v16030325","title":"Epidemiological and Clinical Characteristics of Mpox in Cisgender and Transgender Women and Non-Binary Individuals Assigned to the Female Sex at Birth: A Comprehensive, Critical Global Perspective","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Canadian Institutes of Health Research","keywords":"Epidemiology; Preparedness; Transgender; Transmission (telecommunications); Demography; Ethnic group; Medicine; Disease; Gerontology; Environmental health; Psychology; Political science; Pathology; Sociology","score_opus":0.16430978835858778,"score_gpt":0.4510576304936866,"score_spread":0.2867478421350988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392018925","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13481839,0.8614944,0.000008507242,0.00021551133,0.00020901371,0.00076164166,0.0023575078,0.000022587777,0.000112454676],"genre_scores_gemma":[0.054797992,0.9441542,0.000037488946,0.0006118117,0.00007251933,0.000121875426,0.00003861922,0.000026893425,0.00013860378],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957178,0.0017082953,0.0009531128,0.00085370406,0.00009009294,0.0006769587],"domain_scores_gemma":[0.9959015,0.003415376,0.00012955992,0.0003045254,0.00007715309,0.00017183712],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011746006,0.00048130256,0.0023218568,0.00017465636,0.00014746457,0.000038904687,0.0002772163,0.0009006554,0.00013604242],"category_scores_gemma":[0.0011312006,0.00028362928,0.00019991268,0.00025457618,0.0015193109,0.00005366047,0.00075575104,0.0009993582,0.00010230766],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024769485,0.0016908409,0.12043103,0.02382144,0.00846092,0.00075773615,0.010999103,2.1564378e-7,0.0010004847,0.0059190257,0.019742725,0.80469954],"study_design_scores_gemma":[0.0009797192,0.0012681247,0.08045415,0.0016200221,0.00047129783,0.0003680852,0.0016278095,0.0000019102483,0.0000068261083,0.0005650543,0.91203177,0.0006052053],"about_ca_topic_score_codex":0.00009612632,"about_ca_topic_score_gemma":0.000034957993,"teacher_disagreement_score":0.8922891,"about_ca_system_score_codex":0.00015887388,"about_ca_system_score_gemma":0.00021799612,"threshold_uncertainty_score":0.9999616},"labels":[],"label_agreement":null},{"id":"W4392104857","doi":"10.3390/v16030344","title":"Does the Recovery of Respiratory Viruses Impact Pulmonary Function at Baseline and 1-, 6-, and 12-Month Follow-Up in People Living with HIV and Pneumonia?","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Universidad Pontificia Bolivariana; Hospital Universitario de San Vicente Fundación; Canada Research Chairs; University of Manitoba; Ministerio de Ciencia, Tecnología e Innovación","keywords":"Rhinovirus; Pneumonia; Medicine; Bronchoalveolar lavage; Respiratory system; Sputum; Internal medicine; Cohort; Community-acquired pneumonia; Streptococcus pneumoniae; Lung; Immunology; Tuberculosis; Biology; Pathology; Microbiology","score_opus":0.01692939719102943,"score_gpt":0.2601405074480948,"score_spread":0.24321111025706538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392104857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993027,0.0058476785,0.000018936327,0.0002852768,0.00018021882,0.00035758674,0.000066064094,0.000074905256,0.00014233185],"genre_scores_gemma":[0.9979124,0.001037606,0.0000176046,0.0005659002,0.00007554306,0.000044805496,0.0000029599714,0.000036518428,0.00030667594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988066,0.000111339104,0.00027726803,0.00040022418,0.0002025171,0.00020202721],"domain_scores_gemma":[0.99890006,0.00064797536,0.00007432212,0.00023056347,0.000028295726,0.000118811804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003148283,0.00023964443,0.00034267374,0.00023960554,0.00011796351,0.000059218484,0.000030787203,0.00007884009,0.000046071575],"category_scores_gemma":[0.0001204147,0.00011547485,0.000055641307,0.0002314654,0.00013121442,0.00024517332,0.00007917846,0.00017008431,0.0000053224926],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015501274,0.0001227721,0.83795726,0.0002862589,0.00021570994,0.0001482782,0.0004890058,0.000011198162,0.1411749,0.000013939921,0.00010500187,0.017925527],"study_design_scores_gemma":[0.0010292771,0.0015038098,0.98815095,0.00077189994,0.0002829258,0.00037030253,0.00033671406,0.0004743292,0.0031883772,0.000048203623,0.003665571,0.00017761583],"about_ca_topic_score_codex":0.00058641494,"about_ca_topic_score_gemma":0.0024161574,"teacher_disagreement_score":0.15019369,"about_ca_system_score_codex":0.0001088768,"about_ca_system_score_gemma":0.000077535966,"threshold_uncertainty_score":0.4708928},"labels":[],"label_agreement":null},{"id":"W4392124080","doi":"10.3390/v16030342","title":"Intra-Host Evolution Analyses in an Immunosuppressed Patient Supports SARS-CoV-2 Viral Reservoir Hypothesis","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mila - Quebec Artificial Intelligence Institute; Centre Hospitalier Universitaire Sainte-Justine; Centre Hospitalier de l’Université de Montréal; Ontario Genomics; Université de Montréal; Institut National de Santé Publique du Québec; Montreal Heart Institute","funders":"Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Institut de Valorisation des Données; Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Viral quasispecies; Biology; Virology; Viral evolution; Virus; Immune system; Epitope; Mutation; Monoclonal antibody; Antibody; Viral entry; Immunology; Viral replication; Genetics; Gene; Genome","score_opus":0.10851330831159095,"score_gpt":0.39866377252519425,"score_spread":0.2901504642136033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392124080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946555,0.0030800682,0.00004113049,0.00019537249,0.00026792102,0.00046307244,0.00005001381,0.00023920786,0.001007736],"genre_scores_gemma":[0.9868678,0.000019603976,0.00017035104,0.012574093,0.00018794698,0.000096597236,0.000009683955,0.00006239437,0.000011544042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997454,0.0002001434,0.00051510776,0.0006017084,0.00066126056,0.00056778255],"domain_scores_gemma":[0.9988369,0.00026309653,0.0000535933,0.0006780892,0.00011919708,0.000049161798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000309925,0.00027502238,0.00041517365,0.00085504726,0.000086246124,0.00016633271,0.00024111605,0.00017764425,0.000057914098],"category_scores_gemma":[0.00034449602,0.00022856801,0.00016437977,0.0009287585,0.00015674363,0.0005770092,0.000117941614,0.00041313624,0.0003068728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006260755,0.0003809624,0.02775932,0.00017270524,0.00010347755,0.0006965067,0.0006013256,0.0000025481681,0.96373534,0.0001002821,0.0023003218,0.003521145],"study_design_scores_gemma":[0.0006008905,0.0007055823,0.019837491,0.00027697685,0.00008341926,0.00003107607,0.00036328656,0.0010670479,0.92864186,0.0004237756,0.04771398,0.00025461297],"about_ca_topic_score_codex":0.0029899245,"about_ca_topic_score_gemma":0.00063217303,"teacher_disagreement_score":0.045413658,"about_ca_system_score_codex":0.00036346022,"about_ca_system_score_gemma":0.0004438716,"threshold_uncertainty_score":0.9320733},"labels":[],"label_agreement":null},{"id":"W4392166174","doi":"10.3390/v16030351","title":"Risk of Severe COVID-19-Related Outcomes among Patients with Cirrhosis: A Population-Based Cohort Study in Canada","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St. Paul's Hospital; BC Centre for Disease Control; University of British Columbia","funders":"Canadian Institutes of Health Research; British Columbia Centre for Disease Control; University of British Columbia; Provincial Health Services Authority","keywords":"Coronavirus disease 2019 (COVID-19); Medicine; Cohort; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Population; Cohort study; Cirrhosis; Internal medicine; Demography; Environmental health; Virology; Outbreak; Disease; Infectious disease (medical specialty)","score_opus":0.00976751565975029,"score_gpt":0.2576417933069691,"score_spread":0.24787427764721884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392166174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986882,0.000060252543,0.0000064152923,0.000026226657,0.00006871943,0.00080227427,0.0002754354,0.00003837452,0.000034059925],"genre_scores_gemma":[0.99945587,0.0000067623046,0.000008496327,0.00028896454,0.0000039038573,0.000038600025,0.00017440777,0.000013502543,0.00000948816],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99911726,0.000059590686,0.00022825398,0.00017730394,0.00032444365,0.00009314124],"domain_scores_gemma":[0.9995259,0.00015495946,0.00005575176,0.00012901425,0.000031917578,0.00010246188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000706095,0.00009746885,0.0002004486,0.0001309451,0.000027475215,0.0000075375015,0.000032519183,0.000023982842,0.000103320366],"category_scores_gemma":[0.000025417794,0.00007004453,0.00002708112,0.00025312218,0.0000129570335,0.00008454895,0.0000034914492,0.00008148805,0.0000028038635],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001799774,0.00018806769,0.997365,0.0001741162,0.00056736975,0.00008762688,0.00035772732,0.0010087523,6.2173626e-7,0.000003438879,0.000025179672,0.00004213873],"study_design_scores_gemma":[0.0023029232,0.00010874578,0.995808,0.00014838862,0.0011020937,2.5741141e-7,0.00020404556,0.000217785,0.00001234028,0.000008876402,0.0000037825507,0.00008276353],"about_ca_topic_score_codex":0.9541674,"about_ca_topic_score_gemma":0.8927621,"teacher_disagreement_score":0.061405297,"about_ca_system_score_codex":0.0002674015,"about_ca_system_score_gemma":0.0009559918,"threshold_uncertainty_score":0.28563333},"labels":[],"label_agreement":null},{"id":"W4392355663","doi":"10.3390/v16030389","title":"Ongoing Gaps in the Hepatitis C Care Cascade during the Direct-Acting Antiviral Era in a Large Retrospective Cohort in Canada: A Population-Based Study","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Public Health Ontario; Toronto General Hospital; University Health Network; University of Toronto; McGill University Health Centre; Institut National de Santé Publique du Québec; Centre Hospitalier de l’Université de Montréal; McGill University; Jewish General Hospital","funders":"Department of Family and Community Medicine, University of Toronto; Canadian Institutes of Health Research; Fonds de recherche du Québec; Public Health Agency of Canada","keywords":"Medicine; Hazard ratio; Cohort; Hepatitis C virus; Internal medicine; Retrospective cohort study; Population; Cohort study; RNA; Hepatitis C; Proportional hazards model; Virology; Virus; Confidence interval; Biology; Environmental health; Gene; Genetics","score_opus":0.01838329154467164,"score_gpt":0.31497336213035915,"score_spread":0.2965900705856875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392355663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952576,0.0008175237,7.503731e-7,0.00029800442,0.00011382868,0.0015133274,0.00009344083,0.00003970213,0.0018657953],"genre_scores_gemma":[0.9990398,0.000053678377,0.000007851089,0.0004773357,0.00008982273,0.0002620733,0.000015468298,0.000037664347,0.000016252874],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99740607,0.00050065015,0.0004065083,0.00040474097,0.00077965826,0.00050237693],"domain_scores_gemma":[0.9990104,0.00052524375,0.000042475753,0.00033130244,0.000047335325,0.000043270404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008556656,0.00017959416,0.00035751722,0.00037840375,0.00014599552,0.00008941251,0.00017209869,0.000052060615,0.00006935961],"category_scores_gemma":[0.0007370117,0.00012237697,0.000045623015,0.0013453095,0.000020497106,0.00015595391,0.00006405344,0.00091144943,0.000008340534],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004427617,0.00007948865,0.9893388,0.00010772261,0.000028414217,0.001951888,0.006984913,0.00006314374,0.00010812358,0.000008348941,0.000033562013,0.001251306],"study_design_scores_gemma":[0.0008059258,0.00006698225,0.99134296,0.000494499,0.000015141922,0.000002014374,0.0049000997,0.0015287858,0.00031196134,0.000002298269,0.00040316334,0.00012619385],"about_ca_topic_score_codex":0.9745997,"about_ca_topic_score_gemma":0.997803,"teacher_disagreement_score":0.02320322,"about_ca_system_score_codex":0.0033521033,"about_ca_system_score_gemma":0.0011866449,"threshold_uncertainty_score":0.8765633},"labels":[],"label_agreement":null},{"id":"W4392897249","doi":"10.3390/v16030460","title":"A Novel Tiled Amplicon Sequencing Assay Targeting the Tomato Brown Rugose Fruit Virus (ToBRFV) Genome Reveals Widespread Distribution in Municipal Wastewater Treatment Systems in the Province of Ontario, Canada","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo","funders":"University of Waterloo; Natural Sciences and Engineering Research Council of Canada; Ministère de l’Environnement, de la Protection de la nature et des Parcs; Mitacs; Ministry of Environment","keywords":"Biology; Genome; Amplicon; Begomovirus; Plant virus; Virus; Virology; Lineage (genetic); Crop; Genetics; Biotechnology; Gene; Polymerase chain reaction; Ecology","score_opus":0.0522873387589321,"score_gpt":0.26008860462143374,"score_spread":0.20780126586250164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392897249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99498284,0.0018800481,7.773751e-7,0.00033877877,0.00009165937,0.00075759983,0.0018258059,0.00002378046,0.00009872475],"genre_scores_gemma":[0.99926156,0.000087878936,0.000004423766,0.00008265927,0.000068265595,0.00017515726,0.0001292698,0.0000017606276,0.00018905065],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99816364,0.0002946917,0.0004120231,0.00029923025,0.00039035373,0.00044008592],"domain_scores_gemma":[0.9985746,0.0011584269,0.00008516224,0.000109398774,0.000029954539,0.000042450578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095883594,0.00019396031,0.00028162546,0.000020212676,0.0001818815,0.0001486373,0.00039102355,0.00005686142,0.00003067625],"category_scores_gemma":[0.00016156671,0.00005670784,0.00005479236,0.00035198167,0.0000725163,0.00014420164,0.00012210273,0.00019801274,0.0000059173935],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003747672,0.000056550678,0.002126322,0.000037558017,0.00003686184,0.00008202684,0.0014672066,0.0002661472,0.9948275,0.00009345489,0.00055813964,0.00041074614],"study_design_scores_gemma":[0.001363606,0.001439742,0.26386026,0.0028453942,0.0001633173,0.00016587645,0.021649936,0.004869308,0.30136546,0.00027077086,0.4002472,0.0017591554],"about_ca_topic_score_codex":0.9855309,"about_ca_topic_score_gemma":0.99377936,"teacher_disagreement_score":0.6934621,"about_ca_system_score_codex":0.0015583456,"about_ca_system_score_gemma":0.00030436894,"threshold_uncertainty_score":0.40750197},"labels":[],"label_agreement":null},{"id":"W4393356881","doi":"10.3390/v16040532","title":"HepG2BD: A Novel and Versatile Cell Line with Inducible HDV Replication and Constitutive HBV Expression","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Virology; Replication (statistics); Cell culture; Biology; Expression (computer science); Line (geometry); Cell biology; Genetics; Computer science; Mathematics; Programming language","score_opus":0.049764787774559886,"score_gpt":0.31150290598467617,"score_spread":0.2617381182101163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393356881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98818475,0.004911394,0.0006150401,0.0004412365,0.00007037397,0.00036273888,0.00006264748,0.00013599575,0.0052158283],"genre_scores_gemma":[0.99620724,0.0007806003,0.0020295794,0.0005262156,0.00008363071,0.000041328774,0.000008277183,0.000016955028,0.00030620422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923813,0.000011673143,0.0001252265,0.00037250272,0.0001292936,0.0001231968],"domain_scores_gemma":[0.9994949,0.0001131354,0.000031028037,0.0002339214,0.000051255116,0.00007575194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000100685764,0.00011804399,0.00017634717,0.000090241105,0.000090539266,0.000036289588,0.00002225991,0.000053983094,0.000028277176],"category_scores_gemma":[0.00011182855,0.000084150146,0.00001177031,0.00014125732,0.00019893894,0.00015544464,0.00006004705,0.00012154422,0.000023324374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031481625,0.00019559324,0.11574184,0.00062203256,0.00012334238,0.00009203494,0.0038311013,0.00000269824,0.8648321,0.0011550917,0.0061461465,0.0069431807],"study_design_scores_gemma":[0.002107543,0.00097238,0.040304415,0.001835757,0.0002631149,0.00012114558,0.0005497095,0.00046644406,0.8476008,0.000114537645,0.1053348,0.0003293205],"about_ca_topic_score_codex":0.0005502447,"about_ca_topic_score_gemma":0.00013200026,"teacher_disagreement_score":0.099188656,"about_ca_system_score_codex":0.0000298271,"about_ca_system_score_gemma":0.00008861175,"threshold_uncertainty_score":0.34315434},"labels":[],"label_agreement":null},{"id":"W4394579387","doi":"10.3390/v16040571","title":"Characterization of an African Swine Fever Virus Field Isolate from Vietnam with Deletions in the Left Variable Multigene Family Region","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Calgary; Canadian Food Inspection Agency","funders":"Oxford Nanopore Technologies; Canadian Food Inspection Agency","keywords":"Virology; Biology; Virus; Genetics","score_opus":0.03681290178905275,"score_gpt":0.24440912219143845,"score_spread":0.2075962204023857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394579387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99798477,0.00012990345,0.00030351235,0.0009246945,0.000046323392,0.0001414342,0.00006600927,0.000040654384,0.00036269275],"genre_scores_gemma":[0.997301,0.00015049714,0.0000745275,0.002157001,0.00012224024,0.000012277113,0.00012820725,0.0000010441288,0.000053228985],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993473,0.00011285712,0.00014937104,0.00019101783,0.00007338435,0.00012602952],"domain_scores_gemma":[0.9996872,0.00017491888,0.000041424104,0.000055332763,0.000015363947,0.000025765054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012585983,0.00008231075,0.0001136991,0.000016292453,0.000067493165,0.000035824287,0.00015344744,0.000048372545,0.0001973218],"category_scores_gemma":[0.000021703292,0.000027084174,0.000028028267,0.00024135615,0.000029517412,0.00018921858,0.000026877991,0.000065029664,0.00001511935],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101315934,0.00009424489,0.009888276,0.000007277556,0.00001917123,0.000010413676,0.00018121033,0.000015143479,0.9824747,0.0007063837,0.00033074708,0.006171134],"study_design_scores_gemma":[0.00007637406,0.00036237456,0.95279706,0.000051458574,0.00003715859,0.0000010162219,0.00039497326,0.0017571329,0.0014637151,0.00054110336,0.04238805,0.00012957318],"about_ca_topic_score_codex":0.0035589163,"about_ca_topic_score_gemma":0.0016142378,"teacher_disagreement_score":0.981011,"about_ca_system_score_codex":0.000006544799,"about_ca_system_score_gemma":0.0000049975056,"threshold_uncertainty_score":0.53800404},"labels":[],"label_agreement":null},{"id":"W4394806441","doi":"10.3390/v16040605","title":"Host Immune Response Modulation in Avian Coronavirus Infection: Tracheal Transcriptome Profiling In Vitro and In Vivo","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Fonds de Recherche du Québec - Santé; Université de Montréal; University of Calgary","funders":"Université de Montréal; Egg Farmers of Canada; Institut national de la recherche scientifique; Natural Sciences and Engineering Research Council of Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Canadian Poultry Research Council; McGill University","keywords":"Transcriptome; In vivo; Immune system; Biology; In vitro; Coronavirus; Virology; Immune modulation; Microbiology; Immunology; Coronavirus disease 2019 (COVID-19); Gene expression; Gene; Medicine; Genetics; Pathology; Infectious disease (medical specialty)","score_opus":0.052652874508531664,"score_gpt":0.2924755789164014,"score_spread":0.23982270440786974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394806441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974122,0.0016274442,0.0000029951232,0.00029655255,0.00013842522,0.00025240358,0.00003881692,0.000083839135,0.00014730835],"genre_scores_gemma":[0.99952096,0.000236323,0.00002668779,0.000062599574,0.000060040213,0.000061087776,0.0000036168312,0.0000018815958,0.00002680005],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99895215,0.00016171945,0.00028809355,0.00028476803,0.000097207965,0.00021605495],"domain_scores_gemma":[0.99966323,0.0002427809,0.000023828905,0.000030289837,0.000012236417,0.000027639866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045994623,0.00013088976,0.00017551366,0.00011155892,0.000088554494,0.00006221367,0.000047371,0.000093696784,0.000059496895],"category_scores_gemma":[0.0000627245,0.00006607496,0.000037777005,0.0007822681,0.00006800121,0.00032246156,0.000027371989,0.00021152686,0.000013376851],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075288356,0.00006650826,0.109239854,0.000012990313,0.0000038070878,0.000019889307,0.00029436263,0.00001991776,0.8802463,0.000047349407,0.0000016968537,0.009294436],"study_design_scores_gemma":[0.00017689983,0.00015790346,0.95421106,0.000063232874,0.000003451359,0.000009120984,0.00019737735,0.0005686452,0.043090854,0.000114015325,0.0012669764,0.00014044465],"about_ca_topic_score_codex":0.0048219515,"about_ca_topic_score_gemma":0.009378992,"teacher_disagreement_score":0.84497124,"about_ca_system_score_codex":0.000113361166,"about_ca_system_score_gemma":0.000008804701,"threshold_uncertainty_score":0.72893804},"labels":[],"label_agreement":null},{"id":"W4395048723","doi":"10.3390/v16050655","title":"Impact of the COVID-19 Pandemic on Hepatitis C Treatment Initiation in British Columbia, Canada: An Interrupted Time Series Study","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre for Advancing Health Outcomes; St. Paul's Hospital; Simon Fraser University; BC Centre for Disease Control; University of British Columbia","funders":"Canadian Institutes of Health Research; British Columbia Centre for Disease Control; Provincial Health Services Authority","keywords":"Medicine; Pandemic; Confidence interval; Demography; Cohort; Interrupted Time Series Analysis; Population; Cohort study; Interrupted time series; Coronavirus disease 2019 (COVID-19); Hepatitis C; Pediatrics; Internal medicine; Environmental health; Psychological intervention; Infectious disease (medical specialty); Disease","score_opus":0.09019091589406096,"score_gpt":0.39123724850752384,"score_spread":0.30104633261346286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395048723","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977333,0.00013045763,8.0503963e-7,0.00013094155,0.00009010699,0.00097123015,0.00057476724,0.00006223005,0.00030616415],"genre_scores_gemma":[0.9985404,0.00021283813,0.0000042546476,0.0004503384,0.000048741324,0.000096153366,0.00003975478,0.000027073751,0.0005804591],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850273,0.000297622,0.00030023782,0.0002609634,0.00041922586,0.00021921725],"domain_scores_gemma":[0.9992438,0.00018689068,0.000040670617,0.0003025128,0.0000570249,0.00016910522],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021192995,0.00010450791,0.00028284514,0.00010230765,0.00006884844,0.000110186775,0.000108586784,0.00005448203,0.0010424216],"category_scores_gemma":[0.0004956056,0.0001014256,0.000066178975,0.00043003593,0.000073598494,0.00016206315,0.00003939837,0.00016852806,0.000018392473],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007264993,0.0004087392,0.98396313,0.000036678153,0.00013283854,0.00043282702,0.0009131634,0.000017120225,0.0006111211,8.7846894e-7,0.002619431,0.010791437],"study_design_scores_gemma":[0.00096837676,0.0031575921,0.9918029,0.0001650596,0.00003828415,0.000044943336,0.00017816821,0.00018298678,0.00009244952,0.00001347109,0.003264117,0.00009165589],"about_ca_topic_score_codex":0.9955686,"about_ca_topic_score_gemma":0.9994175,"teacher_disagreement_score":0.010699782,"about_ca_system_score_codex":0.0029773277,"about_ca_system_score_gemma":0.0036426808,"threshold_uncertainty_score":0.9998708},"labels":[],"label_agreement":null},{"id":"W4395072674","doi":"10.3390/v16050661","title":"T-Cell Responses to COVID-19 Vaccines and Breakthrough Infection in People Living with HIV Receiving Antiretroviral Therapy","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Providence Health Care; AIDS Vancouver; McGill University Health Centre; Simon Fraser University","funders":"Canadian Institutes of Health Research; Simon Fraser University; Providence Health Care; Public Health Agency of Canada; Wellcome Trust","keywords":"Medicine; Seroconversion; Vaccination; Immunology; Immune system; CD8; HIV vaccine; Antiretroviral therapy; Virology; T cell; Vaccine trial; Human immunodeficiency virus (HIV); Viral load","score_opus":0.04708307742426741,"score_gpt":0.3661769898640955,"score_spread":0.3190939124398281,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395072674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99526,0.0024598583,0.00031201993,0.0007053872,0.00010055249,0.00042543345,0.000007014994,0.00022964942,0.0005001087],"genre_scores_gemma":[0.96442205,0.00027623712,0.00012776826,0.034758963,0.0001714115,0.000060550854,7.18322e-7,0.00004472788,0.00013757772],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863666,0.00013274033,0.00019861532,0.0004353366,0.0002760818,0.00032053672],"domain_scores_gemma":[0.9987072,0.0009070379,0.000024980087,0.00023485905,0.000044727058,0.00008124687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048592,0.00018720796,0.00026354264,0.00058680645,0.00010276292,0.00015715178,0.00007079453,0.00008292934,0.00003401554],"category_scores_gemma":[0.00065914623,0.00014117846,0.000041181807,0.0010139388,0.000043069624,0.00028431797,0.00007080418,0.00024189,0.00005899108],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094228395,0.00009837935,0.92298543,0.0003165928,0.000026000425,0.00010720297,0.0023872592,0.0000020560833,0.06887894,0.000022305203,0.0010462287,0.0031873337],"study_design_scores_gemma":[0.001746845,0.0019241527,0.80514455,0.0008121793,0.000031349646,0.00017347967,0.00044791205,0.00021172155,0.044526823,0.000042353884,0.14460213,0.00033650393],"about_ca_topic_score_codex":0.005881364,"about_ca_topic_score_gemma":0.0015981919,"teacher_disagreement_score":0.14355591,"about_ca_system_score_codex":0.0001718395,"about_ca_system_score_gemma":0.00050007773,"threshold_uncertainty_score":0.8890902},"labels":[],"label_agreement":null},{"id":"W4395113802","doi":"10.3390/v16050660","title":"Histo-Blood Group Antigen-Producing Bacterial Cocktail Reduces Rotavirus A, B, and C Infection and Disease in Gnotobiotic Piglets","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"International Development Research Centre; Wellcome Trust","keywords":"Biology; Rotavirus; Microbiology; Viral shedding; Virology; Diarrhea; Bacteria; Virus; Antibody; Immune system; Antigen; Reoviridae; Norovirus; Immunology; In vivo","score_opus":0.033311653886718515,"score_gpt":0.3188043006749365,"score_spread":0.28549264678821795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395113802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99188304,0.0065020495,0.000016181642,0.0007926586,0.00036431476,0.0003039461,0.000025631498,0.000075926844,0.000036246616],"genre_scores_gemma":[0.9943668,0.0046508284,0.00012451116,0.0003528252,0.00038074848,0.00002631747,0.000023429966,0.000020231515,0.00005430336],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987805,0.00013042524,0.00023963157,0.00042541933,0.000105611965,0.00031844946],"domain_scores_gemma":[0.9994822,0.000041856052,0.000024992496,0.00013471176,0.000016622902,0.00029961157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029955132,0.00013860781,0.00027017095,0.00022505288,0.00006157196,0.0000637553,0.000030209289,0.000058939717,0.000076956436],"category_scores_gemma":[0.00072070066,0.000119771445,0.00003569676,0.0001305568,0.00016464663,0.0002188117,0.00007209103,0.0002097327,0.000017273678],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075297686,0.00014938127,0.5636772,0.00044751432,0.000058192727,0.0005932638,0.00013480172,0.0000014438014,0.41876414,0.00006106781,0.0013651629,0.013994838],"study_design_scores_gemma":[0.0012873872,0.00081762177,0.98240775,0.0008330004,0.00007189533,0.00016411913,0.00001602628,0.00019027028,0.0027561758,0.00019574736,0.011108756,0.00015125259],"about_ca_topic_score_codex":0.0013459291,"about_ca_topic_score_gemma":0.000215987,"teacher_disagreement_score":0.41873056,"about_ca_system_score_codex":0.00004524908,"about_ca_system_score_gemma":0.000061488405,"threshold_uncertainty_score":0.48841378},"labels":[],"label_agreement":null},{"id":"W4395675997","doi":"10.3390/v16050684","title":"Hepatitis E Virus in Domestic Ruminants and Virus Excretion in Milk—A Potential Source of Zoonotic HEV Infection","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"L'Oreal USA","keywords":"Hepatitis E virus; Transmission (telecommunications); Zoonosis; Biology; Hepatitis E; Veterinary medicine; Virology; Environmental health; Genotype; Medicine","score_opus":0.026550927080624974,"score_gpt":0.316688740361828,"score_spread":0.290137813281203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395675997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99325335,0.0049153115,0.00062878424,0.00017535604,0.00047967053,0.00029128423,0.000023083761,0.00006205351,0.00017110107],"genre_scores_gemma":[0.9542812,0.04491559,0.00014035044,0.00041646257,0.00012546833,0.000035847665,0.000009673121,0.000026929945,0.00004847299],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984789,0.00014304838,0.000566854,0.00034930973,0.00014286126,0.0003190456],"domain_scores_gemma":[0.9994117,0.0002511653,0.00007216672,0.00015816592,0.000031139265,0.000075650154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003814918,0.00018459022,0.00054135825,0.00046292137,0.000042647756,0.000014477575,0.000037915255,0.0001617297,0.00009904587],"category_scores_gemma":[0.00048701125,0.00016671103,0.000070065835,0.0004133542,0.00016656559,0.00014676955,0.000072282135,0.00025175352,0.000053063854],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017626055,0.0001467568,0.94850993,0.0004798946,0.00005226354,0.0003101594,0.00047104116,0.0001440069,0.03373202,0.00018246767,0.00032961194,0.015465565],"study_design_scores_gemma":[0.0008765702,0.00049454055,0.98454964,0.0008550356,0.000089310306,0.00013879112,0.000038118727,0.0056620697,0.002544559,0.00038791323,0.0041806307,0.00018280375],"about_ca_topic_score_codex":0.14286865,"about_ca_topic_score_gemma":0.050750066,"teacher_disagreement_score":0.09211858,"about_ca_system_score_codex":0.00013005504,"about_ca_system_score_gemma":0.000061566825,"threshold_uncertainty_score":0.9665713},"labels":[],"label_agreement":null},{"id":"W4396585440","doi":"10.3390/v16050695","title":"Factor-Dependent Internal Ribosome Entry Site and -1 Programmed Frameshifting Signal in the Bemisia-Associated Dicistrovirus 2","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; University of British Columbia","funders":"Canadian Institutes of Health Research; Empresa Brasileira de Pesquisa Agropecuária; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Internal ribosome entry site; Biology; Translation (biology); Eukaryotic translation; Ribosome; Genetics; Initiation factor; Translational frameshift; Cell biology; Frameshift mutation; RNA; Stem-loop; Nucleic acid structure; Messenger RNA; Mutation; Gene","score_opus":0.04449340543248097,"score_gpt":0.28877337839652745,"score_spread":0.24427997296404647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396585440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541557,0.0026504754,8.394784e-7,0.0006415595,0.000062894054,0.00022190459,0.0006331623,0.00010139766,0.00027218298],"genre_scores_gemma":[0.99884665,0.0004933774,0.0000040485043,0.00034600694,0.00015989716,0.00003439371,0.000030487246,0.0000013478847,0.000083780535],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984386,0.00021954969,0.00020269272,0.00029742622,0.00042934465,0.00041240148],"domain_scores_gemma":[0.9985604,0.0012760273,0.00003951876,0.000036862464,0.000020493795,0.00006667913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047524125,0.00015504214,0.00016483785,0.000026125526,0.00020529177,0.00043205038,0.00026454785,0.000077341414,0.0001487547],"category_scores_gemma":[0.0002506726,0.000049257076,0.00005511835,0.00031090717,0.00010683096,0.00016763441,0.00017405725,0.0004457965,0.000052184656],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007024583,0.00016923693,0.13063686,0.000030668056,0.00009866259,0.0003143395,0.0015861386,0.0000013191025,0.73377246,0.0001125974,0.0013354731,0.13187201],"study_design_scores_gemma":[0.00053246034,0.0008509492,0.87603307,0.0005651936,0.000045406334,0.00005041855,0.0031242634,0.0005513981,0.024438854,0.0009871188,0.09211373,0.00070711935],"about_ca_topic_score_codex":0.0015660707,"about_ca_topic_score_gemma":0.0021382528,"teacher_disagreement_score":0.74539626,"about_ca_system_score_codex":0.000046183908,"about_ca_system_score_gemma":0.000009475677,"threshold_uncertainty_score":0.41662717},"labels":[],"label_agreement":null},{"id":"W4396666371","doi":"10.3390/v16050732","title":"RETRACTED: Regions of Bovine Adenovirus-3 Protein VII Involved in Interactions with Viral and Cellular Proteins","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Nuclear transport; Importin; Nuclear protein; Nucleolus; Nuclear localization sequence; Biology; Molecular biology; Transfection; Cytoplasm; Retinoblastoma-like protein 1; Protein A/G; Cell biology; Fusion protein; Cell nucleus; Recombinant DNA; Gene; Biochemistry; Transcription factor","score_opus":0.02480471781280503,"score_gpt":0.29442181445421495,"score_spread":0.2696170966414099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396666371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953866,0.0030785652,0.00025986295,0.00027350467,0.000036023786,0.0006145405,0.000047526086,0.000029231109,0.00027411536],"genre_scores_gemma":[0.99846923,0.00015760082,0.00033609135,0.0000970824,0.00012052462,0.00015060639,0.000037315127,0.000042465887,0.0005890898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887466,0.000103942744,0.00022691696,0.00037577853,0.00018476752,0.00023395485],"domain_scores_gemma":[0.9994594,0.000018510429,0.000048710135,0.00033980928,0.00006126447,0.00007231421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020453864,0.0001636295,0.00015996005,0.00020742613,0.000047987036,0.000043135384,0.00014691877,0.00012314889,0.00005361157],"category_scores_gemma":[0.000052999036,0.00013744163,0.000043375436,0.00024627044,0.00018426603,0.000019948417,0.00008489753,0.00029660284,0.000010327522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013644586,0.000113723516,0.00086540275,0.00009306644,0.00006953723,0.000025108078,0.00009148558,0.000007755682,0.99583787,0.00014399098,0.00025765313,0.0011299347],"study_design_scores_gemma":[0.00043488425,0.0028068726,0.0003529579,0.00020295616,0.000011942819,0.000007342669,0.00008257892,0.000056029403,0.98037094,0.00011465796,0.015390568,0.00016828175],"about_ca_topic_score_codex":0.00022170974,"about_ca_topic_score_gemma":0.0031389862,"teacher_disagreement_score":0.015466956,"about_ca_system_score_codex":0.000023776727,"about_ca_system_score_gemma":0.00018487796,"threshold_uncertainty_score":0.5604707},"labels":[],"label_agreement":null},{"id":"W4396674409","doi":"10.3390/v16050734","title":"The Antiviral Activity of Interferon-Induced Transmembrane Proteins and Virus Evasion Strategies","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research; Pfizer","keywords":"Interferon; Virus; Transmembrane protein; Virology; Biology; Glycoprotein; Context (archaeology); Viral entry; Viral replication; Genetics; Receptor","score_opus":0.026817755682010606,"score_gpt":0.2898407163929635,"score_spread":0.2630229607109529,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396674409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917213,0.0060547167,0.00004645266,0.0001436999,0.00084350817,0.0002275032,0.000027501696,0.00007321262,0.00086211826],"genre_scores_gemma":[0.99862033,0.00040924875,0.0000034721193,0.00002682059,0.000013033637,0.0000137838615,0.0000012800798,0.000014650141,0.0008974026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914414,0.00024489977,0.00017989766,0.00019593294,0.00003302482,0.00020209435],"domain_scores_gemma":[0.99954563,0.00018128894,0.000042582444,0.00019908315,0.000023219916,0.000008212834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016058856,0.00014573483,0.00018585006,0.00007036409,0.00015625612,0.000061277795,0.00016042731,0.00014145821,0.00006178003],"category_scores_gemma":[0.000038298218,0.00008988272,0.00008804831,0.000098710865,0.0002857584,0.00024480748,0.00007531752,0.00026253972,0.00005476666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008311186,0.000049748836,0.000026748054,0.00007029857,0.00010147394,0.0000017717581,0.00031691082,1.288624e-7,0.9718521,0.0018815508,0.000108890075,0.024759246],"study_design_scores_gemma":[0.00028246778,0.00046586466,0.0019748178,0.00020640771,0.000024172452,0.000019210489,0.00020508046,0.000005874053,0.9814292,0.00009478589,0.015190141,0.000101941005],"about_ca_topic_score_codex":0.00022216912,"about_ca_topic_score_gemma":0.00013664893,"teacher_disagreement_score":0.024657305,"about_ca_system_score_codex":0.000016023447,"about_ca_system_score_gemma":0.000111245674,"threshold_uncertainty_score":0.3665311},"labels":[],"label_agreement":null},{"id":"W4396731764","doi":"10.3390/v16050746","title":"A Screening Study Identified Decitabine as an Inhibitor of Equid Herpesvirus 4 That Enhances the Innate Antiviral Response","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"European Regional Development Fund; Région Normandie; Université de Caen Normandie; Agence Nationale de la Recherche; European Commission","keywords":"Decitabine; Virology; Cidofovir; Biology; In vivo; Innate immune system; Cytopathic effect; Antiviral drug; Virus; Immunology; Immune system","score_opus":0.060279941704280394,"score_gpt":0.3750061321280421,"score_spread":0.3147261904237617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396731764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968861,0.0010140791,0.00011860383,0.00012505607,0.0004964888,0.00068932056,0.00003442269,0.00016833525,0.00046763167],"genre_scores_gemma":[0.9983904,0.0000726617,0.00013048635,0.00025493454,0.00019131684,0.000080587975,0.000005668604,0.000044382203,0.00082956813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982659,0.00034565374,0.00034340625,0.00038212017,0.000411191,0.0002517358],"domain_scores_gemma":[0.9989895,0.00030384253,0.00007530736,0.00048807045,0.000058601025,0.00008466056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009309891,0.0002179141,0.0003152412,0.000266829,0.0001925404,0.00012954306,0.00012920622,0.00007176642,0.00018252785],"category_scores_gemma":[0.0001705557,0.0001368043,0.00012117151,0.00054613734,0.00014751093,0.00033800787,0.00009235468,0.00020146302,0.00015053885],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016630227,0.0059207645,0.0912133,0.00022364825,0.0032882018,0.0018657482,0.010807221,0.000013427736,0.63192517,0.0006092191,0.001608207,0.23589486],"study_design_scores_gemma":[0.0030843755,0.004965545,0.08558705,0.0007061518,0.0007304391,0.00009095447,0.004107062,0.00012697029,0.85110474,0.00023279444,0.048901457,0.00036248114],"about_ca_topic_score_codex":0.00093989365,"about_ca_topic_score_gemma":0.0002053527,"teacher_disagreement_score":0.23553237,"about_ca_system_score_codex":0.000038738428,"about_ca_system_score_gemma":0.00013516773,"threshold_uncertainty_score":0.55787176},"labels":[],"label_agreement":null},{"id":"W4396798638","doi":"10.3390/v16050755","title":"Chronic and Latent Viral Infections and Leukocyte Telomere Length across the Lifespan of Female and Male Individuals Living with or without HIV","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; B.C. Women's Hospital & Health Centre; SickKids Foundation; University of Toronto; Women's Health Research Institute; BC Centre for Disease Control; Hospital for Sick Children; University of British Columbia","funders":"Canadian Institutes of Health Research; Centre for Blood Research, University of British Columbia","keywords":"Medicine; Immunology; Cohort; Virology; Internal medicine","score_opus":0.02960406421282631,"score_gpt":0.30827093295291574,"score_spread":0.27866686874008945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396798638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98606545,0.012933912,0.00002459272,0.0002869729,0.000067563975,0.00033240492,0.000046422545,0.00007695177,0.0001657028],"genre_scores_gemma":[0.9946564,0.0035298264,0.00013099292,0.0002020352,0.00017496388,0.000025561678,0.000002257969,0.000029306188,0.0012486734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989542,0.000048543337,0.00021664903,0.0003198112,0.00018957628,0.0002712206],"domain_scores_gemma":[0.9992681,0.00030405246,0.000060538383,0.00021203968,0.000035615525,0.00011963937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002299027,0.00019234697,0.00032251864,0.00009844126,0.00022308802,0.00011966223,0.000055646367,0.00007321745,0.00007697772],"category_scores_gemma":[0.00007915292,0.00010884186,0.000027239306,0.00022923412,0.00048993196,0.00022508366,0.00011619758,0.00022769568,0.0000073387064],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052169606,0.000051835093,0.976847,0.00060498907,0.0001763047,0.000026313928,0.004608327,0.0000031833445,0.004710914,0.00011700374,0.00016672623,0.012635254],"study_design_scores_gemma":[0.0012998391,0.0015529569,0.96267813,0.0021258371,0.0003692353,0.001324503,0.0028682568,0.00039466197,0.008964696,0.000014467185,0.018058658,0.00034872926],"about_ca_topic_score_codex":0.00025143762,"about_ca_topic_score_gemma":0.00045641264,"teacher_disagreement_score":0.017891932,"about_ca_system_score_codex":0.000030395006,"about_ca_system_score_gemma":0.00015968495,"threshold_uncertainty_score":0.44384423},"labels":[],"label_agreement":null},{"id":"W4396937999","doi":"10.3390/v16050785","title":"Modulation of Paracellular Permeability in SARS-CoV-2 Blood-to-Brain Transcytosis","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University; Florida Department of Health; U.S. Department of Veterans Affairs","keywords":"Transcytosis; Paracellular transport; Blood–brain barrier; Tight junction; Endocytosis; Caveolae; Biology; Receptor; Cell biology; Vascular permeability; Clathrin; Endothelium; Immunology; Central nervous system; Permeability (electromagnetism); Signal transduction; Neuroscience","score_opus":0.03905297837115854,"score_gpt":0.34427319806529105,"score_spread":0.3052202196941325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396937999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993541,0.00068549905,0.00059091655,0.0039936854,0.0001189675,0.00074298657,0.00002503496,0.0001285496,0.00017337738],"genre_scores_gemma":[0.99688476,0.000014774067,0.0005341593,0.0023702113,0.000079265126,0.000041810683,0.000009629053,0.000029737326,0.00003566954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987037,0.00010708922,0.00034607432,0.000353832,0.00028738842,0.00020187104],"domain_scores_gemma":[0.9988855,0.0005963494,0.000029963292,0.0003810972,0.000036021527,0.000071066956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049071846,0.00015263268,0.00033436622,0.00031664682,0.000018088833,0.000020603937,0.00009405078,0.00010336159,0.000050377537],"category_scores_gemma":[0.00067835156,0.0001346879,0.0001286862,0.00048889796,0.00006616847,0.00015957883,0.000022212169,0.00014782317,0.00007091903],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016151565,0.0002162394,0.052391373,0.0010824278,0.000060004753,0.00008441524,0.00090778514,0.00012735775,0.9424014,0.00036037646,0.0003629295,0.001844177],"study_design_scores_gemma":[0.000990285,0.0003993141,0.11784856,0.0006197656,0.00015646996,0.000011259062,0.000021217307,0.002700919,0.87206936,0.0006317491,0.004379383,0.00017170158],"about_ca_topic_score_codex":0.0005203946,"about_ca_topic_score_gemma":0.000107599895,"teacher_disagreement_score":0.07033202,"about_ca_system_score_codex":0.000077574805,"about_ca_system_score_gemma":0.00012314561,"threshold_uncertainty_score":0.5492413},"labels":[],"label_agreement":null},{"id":"W4396976877","doi":"10.3390/v16050794","title":"Enzyme-Linked Immunosorbent Assay Using Henipavirus-Receptor EphrinB2 and Monoclonal Antibodies for Detecting Nipah and Hendra Viruses","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba; Canadian Food Inspection Agency","funders":"Public Health Agency; Public Health Agency of Canada; Canadian Food Inspection Agency","keywords":"Hendra Virus; Virology; Monoclonal antibody; Antibody; Biology; Hepatitis E virus; Antigen; Microbiology; Virus; Immunology; Genotype","score_opus":0.06851939605116376,"score_gpt":0.3522076691702919,"score_spread":0.28368827311912814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396976877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9541074,0.043615177,0.00047045003,0.00020757958,0.0005765806,0.00047751167,0.00023430341,0.00024332317,0.000067678564],"genre_scores_gemma":[0.9943731,0.0010818762,0.0022813885,0.0015462559,0.00043727818,0.000050718656,0.00001928917,0.000063167565,0.00014692202],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848956,0.00008147552,0.0003556284,0.00050581177,0.00016465789,0.00040287836],"domain_scores_gemma":[0.9989995,0.0005103133,0.00006911578,0.00019766169,0.00005590755,0.00016750616],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027738718,0.0003126222,0.00043883952,0.00021973168,0.00035365287,0.00013189645,0.000069945716,0.00017519559,0.00010798357],"category_scores_gemma":[0.00034566913,0.0002631964,0.0001317533,0.00013807652,0.00031099468,0.0003593074,0.00012040089,0.00024227546,0.000025825553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001869017,0.00020680991,0.06942733,0.0012039285,0.00083549804,0.00009221119,0.00090482476,0.000016119591,0.89500225,0.001951721,0.0014533299,0.027036974],"study_design_scores_gemma":[0.0078525655,0.0031319913,0.12789826,0.0030801853,0.0036766136,0.0008410032,0.0024238087,0.014998726,0.589864,0.003848278,0.23999311,0.0023914676],"about_ca_topic_score_codex":0.00014393631,"about_ca_topic_score_gemma":0.000026358806,"teacher_disagreement_score":0.30513826,"about_ca_system_score_codex":0.00003918657,"about_ca_system_score_gemma":0.00010142877,"threshold_uncertainty_score":0.999982},"labels":[],"label_agreement":null},{"id":"W4397002149","doi":"10.3390/v16050801","title":"The Effect of Age and Comorbidities: Children vs. Adults in Their Response to SARS-CoV-2 Infection","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Young adult; Prospective cohort study; Immunosuppression; Odds ratio; Immunology; Cohort; Cohort study; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Internal medicine; Antibody; Coronavirus disease 2019 (COVID-19); Disease; Infectious disease (medical specialty)","score_opus":0.03109430124590474,"score_gpt":0.354471373189307,"score_spread":0.32337707194340226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4397002149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973336,0.0013654947,0.0000053913745,0.00023172177,0.00011965368,0.00061630754,0.000020711888,0.0000697207,0.00023740683],"genre_scores_gemma":[0.99376243,0.00005271188,0.000003474191,0.0059983684,0.00008386886,0.000066393026,0.0000010132519,0.000021502265,0.000010260566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989305,0.00026038772,0.00018229718,0.00021575658,0.00020565327,0.000205406],"domain_scores_gemma":[0.9983528,0.0013341737,0.00001902968,0.00025119915,0.000024341223,0.000018442695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088945153,0.00012846579,0.00022271393,0.00027838553,0.000058291058,0.000057842055,0.00008174573,0.00006651706,0.0000018146632],"category_scores_gemma":[0.00068679266,0.0000752621,0.000058606234,0.00042013338,0.0001264417,0.000072768555,0.0000777362,0.000212311,0.000042719177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016507398,0.000064450505,0.3132721,0.00039306833,0.0001230812,0.00016978572,0.0021472205,3.536337e-7,0.63885814,0.000053135333,0.0025600456,0.02585123],"study_design_scores_gemma":[0.00093165424,0.0016570307,0.19779393,0.0005007044,0.00001716094,0.000027852024,0.00003477751,0.000045008223,0.7223985,0.00003358448,0.07648397,0.00007582066],"about_ca_topic_score_codex":0.0022671514,"about_ca_topic_score_gemma":0.0006378421,"teacher_disagreement_score":0.11547816,"about_ca_system_score_codex":0.000059698137,"about_ca_system_score_gemma":0.000077618206,"threshold_uncertainty_score":0.342727},"labels":[],"label_agreement":null},{"id":"W4398203930","doi":"10.3390/v16060825","title":"Exosomes as Conduits: Facilitating Hepatitis B Virus-Independent Hepatitis D Virus Transmission and Propagation in Hepatocytes","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Virology; Hepatitis D virus; Microvesicles; Biology; Virus; Hepatitis B virus; Exosome; Hepatitis D; RNA; Context (archaeology); microRNA; Gene; Genetics; HBsAg","score_opus":0.013652451859672324,"score_gpt":0.2749857365038786,"score_spread":0.26133328464420624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398203930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9753489,0.021858733,0.0016611594,0.00007317721,0.00013645928,0.00038616583,0.00017154621,0.0000694616,0.00029439232],"genre_scores_gemma":[0.989948,0.008436509,0.0006900656,0.00033708217,0.000089320536,0.000097350014,0.00011442712,0.00004501898,0.00024222744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840754,0.00014145413,0.00035406926,0.00057944213,0.00023829847,0.00027917602],"domain_scores_gemma":[0.99945843,0.00006642826,0.000052274867,0.000243151,0.00004185048,0.00013785744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022423042,0.00024120432,0.00018193755,0.000117937445,0.000090773225,0.00012838095,0.00014070346,0.00017598248,0.00013770981],"category_scores_gemma":[0.00016286413,0.00023515991,0.00007570369,0.0001430809,0.00011918352,0.00004117754,0.00008898846,0.00015485147,0.00006706581],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006601971,0.000070463786,0.04933357,0.00016421592,0.000037095317,0.000117225034,0.0003683643,0.000030308602,0.9156593,0.00026071275,0.00026188183,0.03363082],"study_design_scores_gemma":[0.00041360353,0.00026637423,0.008176095,0.00024128448,0.000028690332,0.000030859,0.0000908642,0.0019245674,0.9655378,0.00072212477,0.02220128,0.00036645375],"about_ca_topic_score_codex":0.0034651817,"about_ca_topic_score_gemma":0.0021512802,"teacher_disagreement_score":0.049878486,"about_ca_system_score_codex":0.00004243714,"about_ca_system_score_gemma":0.0001308471,"threshold_uncertainty_score":0.9589543},"labels":[],"label_agreement":null},{"id":"W4398325042","doi":"10.3390/v16060826","title":"Cytokinins Reduce Viral Replication and Alter Plaque Morphology of Frog Virus 3 In Vitro","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Viral replication; Biology; In vitro; Lytic cycle; Virus; Cell biology; Virology; Biochemistry","score_opus":0.029222281063935512,"score_gpt":0.3394003211660061,"score_spread":0.3101780401020706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398325042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949248,0.004174374,0.00006446117,0.0002263048,0.000083937455,0.00016186592,0.00010361446,0.00001695052,0.00024373755],"genre_scores_gemma":[0.9979012,0.0011067606,0.0001880965,0.00040501665,0.00012936423,0.00004525387,0.00006402591,0.000026992371,0.00013330963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989446,0.00010023551,0.00020983398,0.00044918378,0.00009801365,0.00019815679],"domain_scores_gemma":[0.99940777,0.00002555135,0.000034289314,0.00045705377,0.000028979835,0.000046355333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027745406,0.0001145644,0.00013929082,0.00012826055,0.000022671811,0.000019520408,0.00014603465,0.00013381246,0.000035358727],"category_scores_gemma":[0.000058532492,0.00010909704,0.000040470335,0.00012448628,0.0001390724,0.0000073778488,0.00009374088,0.00011932172,0.00001908255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015041342,0.000044850283,0.00021360682,0.000024590747,0.00003461862,0.000011482847,0.00005941487,0.00000936619,0.98908293,0.000068684945,0.00087912363,0.008067171],"study_design_scores_gemma":[0.000309854,0.0006701179,0.0004722157,0.000015016263,0.000006196892,0.000016675329,0.000014900063,0.00008526221,0.98772544,0.00017146615,0.010407162,0.00010569434],"about_ca_topic_score_codex":0.00015002908,"about_ca_topic_score_gemma":0.00010747975,"teacher_disagreement_score":0.009528039,"about_ca_system_score_codex":0.000016459577,"about_ca_system_score_gemma":0.00008920263,"threshold_uncertainty_score":0.4448848},"labels":[],"label_agreement":null},{"id":"W4398781148","doi":"10.3390/v16060833","title":"A Comprehensive Review of Our Understanding and Challenges of Viral Vaccines against Swine Pathogens","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Virology; Pseudorabies; Classical swine fever; Vaccination; Biology; Foot-and-mouth disease; Virus; Medicine","score_opus":0.3257765218124674,"score_gpt":0.3620177479724155,"score_spread":0.03624122615994807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398781148","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019522343,0.9982775,1.798204e-7,0.0001969564,0.00013638996,0.0004013673,0.00037151776,0.000043530432,0.00037732947],"genre_scores_gemma":[0.00034067157,0.9993113,0.000014186082,0.000085170774,0.00019034889,0.000028151298,0.000015318568,0.0000034808786,0.000011366786],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986753,0.0001274137,0.00056172395,0.00032506353,0.00014866737,0.00016185523],"domain_scores_gemma":[0.9992399,0.00023580005,0.00033522482,0.00007067919,0.00008003382,0.00003833888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014371287,0.00031813615,0.0015268115,0.000044570173,0.00008339401,0.000011813829,0.00014686448,0.00012610838,0.000015840322],"category_scores_gemma":[0.00007755672,0.00010786678,0.0003571785,0.00034125196,0.0000628622,0.000052569572,0.00024303432,0.0001476841,0.000015272062],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000040210334,0.000050122842,0.000015622016,0.21613209,0.0003607824,0.0000066890857,0.000026797872,1.907847e-8,0.0003930008,0.0017822193,0.0011598106,0.7800688],"study_design_scores_gemma":[0.00002330861,0.00020461397,0.000053567794,0.08576483,0.0007685862,0.000011264829,0.00048021122,1.1398e-7,0.000007260894,0.00013100609,0.9123503,0.00020491022],"about_ca_topic_score_codex":0.000034517456,"about_ca_topic_score_gemma":0.000053095486,"teacher_disagreement_score":0.9111905,"about_ca_system_score_codex":0.00003760314,"about_ca_system_score_gemma":0.000014782235,"threshold_uncertainty_score":0.43986794},"labels":[],"label_agreement":null},{"id":"W4399083352","doi":"10.3390/v16060862","title":"Detection of Equine Parvovirus-Hepatitis Virus and Equine Hepacivirus in Archived Sera from Horses in France and Australia","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Virology; Parvovirus; Hepatitis C virus; Disease; Hepacivirus; Hepatitis virus; Medicine; Virus; Biology; Pathology","score_opus":0.040725974359969344,"score_gpt":0.2716821066206484,"score_spread":0.23095613226067907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399083352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947039,0.004417991,0.000007627494,0.00007551452,0.00012453266,0.00016094134,0.00037662938,0.0000586182,0.000074239404],"genre_scores_gemma":[0.9954771,0.004229006,0.000055193974,0.000058299705,0.00009346195,0.000032102078,0.000007801031,0.0000017545759,0.000045284443],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99894124,0.0000782146,0.00029358946,0.0003518657,0.00011535127,0.00021974844],"domain_scores_gemma":[0.9994934,0.00034889425,0.00005224217,0.00004341765,0.000016302532,0.000045723235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012818634,0.00017031541,0.00026533136,0.00006956937,0.00007566866,0.00005482931,0.000070726484,0.000080090525,0.0001342161],"category_scores_gemma":[0.00007417208,0.00008415098,0.000035330882,0.00036080484,0.00019397931,0.00024817538,0.0001081652,0.00016805521,0.00002422406],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034172717,0.000036999318,0.2953488,0.000017286506,0.000015149185,0.00001129087,0.0001740613,0.0000025262364,0.6811668,0.000049549017,0.00002283788,0.023120474],"study_design_scores_gemma":[0.00015282453,0.0005409835,0.91207534,0.00014117555,0.000014876012,0.0000035587923,0.00008813162,0.00010237864,0.08108027,0.00090105896,0.0047129015,0.00018647456],"about_ca_topic_score_codex":0.0770812,"about_ca_topic_score_gemma":0.19706404,"teacher_disagreement_score":0.6167266,"about_ca_system_score_codex":0.000021881984,"about_ca_system_score_gemma":0.0000042417078,"threshold_uncertainty_score":0.9290646},"labels":[],"label_agreement":null},{"id":"W4399303329","doi":"10.3390/v16060890","title":"Tripartite Motif-Containing Protein 65 (TRIM65) Inhibits Hepatitis B Virus Transcription","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Taiwan University; Institute of Genetics; Pennsylvania State University; National Natural Science Foundation of China; Basic and Applied Basic Research Foundation of Guangdong Province; China Postdoctoral Science Foundation; Nationwide Children's Hospital; University of Science and Technology of China; University of Pennsylvania","keywords":"HBx; cccDNA; Biology; Hepatitis B virus; Transcription (linguistics); Virology; Viral replication; Hepatitis B virus PRE beta; Ubiquitin ligase; Molecular biology; Cell biology; Virus; Ubiquitin; Gene; Genetics; HBsAg","score_opus":0.045929016898167266,"score_gpt":0.30329544139872167,"score_spread":0.2573664245005544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399303329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9841706,0.008600888,0.0005386506,0.0008035739,0.00060363964,0.0010019625,0.00011970482,0.0008319888,0.0033289897],"genre_scores_gemma":[0.9941621,0.0014810079,0.00056093425,0.0013774188,0.00052706065,0.0002906857,0.00002505629,0.000085905434,0.0014898697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99791116,0.00009336251,0.00052666117,0.00052044645,0.00045678116,0.0004916011],"domain_scores_gemma":[0.99927557,0.000087218716,0.000057021167,0.0003035606,0.00009604655,0.00018056204],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031609315,0.00031298414,0.00048476292,0.00032932777,0.00017537363,0.000120966666,0.000089433444,0.00014933183,0.000497883],"category_scores_gemma":[0.00017392631,0.00027867916,0.00018648148,0.00054290565,0.0001229673,0.0004582048,0.000045820885,0.00036711647,0.0012457247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033439678,0.00023094044,0.05311311,0.0007089812,0.00039130403,0.00061698747,0.0040433574,0.0000027915507,0.8826986,0.0027416765,0.0058002174,0.049317636],"study_design_scores_gemma":[0.0016426125,0.0012458831,0.035340898,0.0025900349,0.0003672334,0.00008219645,0.00012740027,0.000633495,0.69659793,0.0006030835,0.26014763,0.00062158616],"about_ca_topic_score_codex":0.008972402,"about_ca_topic_score_gemma":0.006251664,"teacher_disagreement_score":0.2543474,"about_ca_system_score_codex":0.00019574126,"about_ca_system_score_gemma":0.00017710823,"threshold_uncertainty_score":0.99996656},"labels":[],"label_agreement":null},{"id":"W4399366703","doi":"10.3390/v16060920","title":"Tepilamide Fumarate as a Novel Potentiator of Virus-Based Therapy","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research; Terry Fox Research Institute; Lotte and John Hecht Memorial Foundation","keywords":"Oncolytic virus; Vesicular stomatitis virus; Virotherapy; Herpes simplex virus; Virology; Virus; Cancer research; Viral replication; Interferon; Cell culture; Biology; Medicine","score_opus":0.03454607313786372,"score_gpt":0.33240663881700216,"score_spread":0.29786056567913843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399366703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98767966,0.01018383,0.0006498432,0.00015251045,0.00019665918,0.00025909167,0.00016172724,0.000056263405,0.00066040293],"genre_scores_gemma":[0.9960386,0.0012462607,0.00022578279,0.0015125502,0.00022680964,0.000048643145,0.00005785283,0.00007264972,0.0005708206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99860793,0.00007851805,0.00025829376,0.00044182956,0.0002924249,0.00032098644],"domain_scores_gemma":[0.9992018,0.000037359296,0.000052182117,0.0005158254,0.0000964763,0.00009638879],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030660647,0.00021383267,0.0001858762,0.0001527993,0.000059142738,0.000059362847,0.0003248178,0.00014476698,0.00034652973],"category_scores_gemma":[0.00005169744,0.0001843348,0.00017798299,0.00026624184,0.00015891722,0.000008107431,0.00006621592,0.00012732748,0.00017145832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001949542,0.00016125776,0.00016377527,0.000038962935,0.00017098789,0.000009784799,0.000020568456,0.00013538617,0.9891181,0.00011096129,0.0014512474,0.0066694366],"study_design_scores_gemma":[0.00067634217,0.0022045139,0.00014761981,0.00003573953,0.000011344682,0.000004508618,0.000011702492,0.0002055139,0.9228061,0.000075065356,0.073627144,0.00019442079],"about_ca_topic_score_codex":0.00012115015,"about_ca_topic_score_gemma":0.00009423059,"teacher_disagreement_score":0.0721759,"about_ca_system_score_codex":0.000016659147,"about_ca_system_score_gemma":0.00039919544,"threshold_uncertainty_score":0.7516955},"labels":[],"label_agreement":null},{"id":"W4399491328","doi":"10.3390/v16060935","title":"Applying Flow Virometry to Study the HIV Envelope Glycoprotein and Differences Across HIV Model Systems","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Ottawa; The Scarborough Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto Scarborough; National Institutes of Health; Canadian Institutes of Health Research; Mitacs; University of Toronto; University of Ottawa","keywords":"Glycoprotein; Monoclonal antibody; Virology; Antibody; Biology; Viral envelope; HEK 293 cells; Flow cytometry; Epitope; Virus; Viral entry; Glycosylation; Cell fusion; Cell culture; Viral replication; Molecular biology; Immunology; Genetics","score_opus":0.05491468863837076,"score_gpt":0.32285746537597076,"score_spread":0.26794277673760003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399491328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98313785,0.013323163,0.00085657905,0.00019757483,0.00021101088,0.001460472,0.00056378957,0.000109318236,0.00014023243],"genre_scores_gemma":[0.995982,0.00011720285,0.00006656114,0.00006378322,0.00003006229,0.0012480892,0.000021217651,0.000016131675,0.0024549598],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988503,0.00016951132,0.00017138675,0.000353707,0.0000702842,0.00038481108],"domain_scores_gemma":[0.9994581,0.00020710749,0.000017449795,0.00025546344,0.000019131534,0.00004277725],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027912835,0.00017157025,0.00020960701,0.000082400635,0.00042284612,0.00019384375,0.0002191507,0.00007738217,0.00009051947],"category_scores_gemma":[0.00004120828,0.00009535266,0.000032820804,0.00019911065,0.00011744891,0.00008243698,0.00022653695,0.00021686761,0.002942786],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012996186,0.002396286,0.1891087,0.00058796676,0.0071017607,0.00059862784,0.048878264,0.0008708483,0.452879,0.0016428956,0.029793598,0.26484242],"study_design_scores_gemma":[0.016099866,0.0074750166,0.21905012,0.0018007791,0.0010235684,0.00075415726,0.09565013,0.0132241845,0.14602973,0.0009684774,0.49359518,0.004328798],"about_ca_topic_score_codex":0.00022803813,"about_ca_topic_score_gemma":0.000039823808,"teacher_disagreement_score":0.4638016,"about_ca_system_score_codex":0.00002976557,"about_ca_system_score_gemma":0.000040846055,"threshold_uncertainty_score":0.99783355},"labels":[],"label_agreement":null},{"id":"W4399575826","doi":"10.3390/v16060942","title":"Development of Robust Freeze-Drying Process for Long-Term Stability of rVSV-SARS-CoV-2 Vaccine","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Protein purification and stability","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; McGill University","keywords":"Term (time); Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Process (computing); Biology; Medicine; Physics; Computer science; Infectious disease (medical specialty); Internal medicine","score_opus":0.0933285528102407,"score_gpt":0.3525390909843665,"score_spread":0.25921053817412576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399575826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98198915,0.001932718,0.015421011,0.000033262284,0.000073855656,0.0003925335,0.000074910786,0.000018514096,0.00006407743],"genre_scores_gemma":[0.99720323,0.000028961602,0.0025321157,0.00003968521,0.000034189525,0.00008950585,0.000050397935,0.000013222841,0.00000868981],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991067,0.000022168764,0.00035841402,0.00029059398,0.00009704721,0.0001250966],"domain_scores_gemma":[0.9994375,0.000019922001,0.000079230886,0.00028616175,0.00015502036,0.000022147895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029691742,0.000104041865,0.00015079846,0.000033495788,0.000035989797,0.000011379993,0.00015696866,0.00008235278,0.000015619189],"category_scores_gemma":[0.00013916077,0.00009162779,0.00006593016,0.00009221529,0.000044145156,0.0000074771733,0.000048577887,0.00003936378,0.0000015119516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010331676,0.00011608113,0.013163072,0.00089335185,0.000048321297,1.7629024e-7,0.00019002786,0.0000035442931,0.98018503,0.0000635698,0.000034149965,0.0051993607],"study_design_scores_gemma":[0.00019748512,0.000060218023,0.006683418,0.000045377983,0.000012480043,6.45558e-7,0.000040191713,0.000031856263,0.9884689,0.00004689573,0.004313657,0.00009891385],"about_ca_topic_score_codex":0.0000071055824,"about_ca_topic_score_gemma":0.0001167007,"teacher_disagreement_score":0.0152141135,"about_ca_system_score_codex":0.000013907014,"about_ca_system_score_gemma":0.0002037226,"threshold_uncertainty_score":0.3736473},"labels":[],"label_agreement":null},{"id":"W4399670143","doi":"10.3390/v16060959","title":"Antiviral Activity of Ag5IO6, a Unique Silver Compound","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Advanced Nanomaterials in Catalysis","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Alberta Innovates; Alberta Innovates - Technology Futures","keywords":"Murine norovirus; Vero cell; Poliovirus; Norovirus; Antimicrobial; Virology; Microbiology; Biology; Broad spectrum; Neutralization; Virus; Chemistry","score_opus":0.03069466490389652,"score_gpt":0.3147519509714433,"score_spread":0.2840572860675468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399670143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962426,0.00040516356,0.0011322083,0.000035306555,0.00082360127,0.000105491556,0.00018272205,0.00022869153,0.00084422686],"genre_scores_gemma":[0.9978447,0.000051525756,0.0017789094,0.00006353285,0.00010457852,0.000012174382,0.0000026659707,0.00002299089,0.00011895322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990065,0.000086691485,0.00021289357,0.0002995137,0.00019613377,0.00019827878],"domain_scores_gemma":[0.9993199,0.00021676964,0.000076147386,0.0003224067,0.00003260577,0.00003217954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026411904,0.00013599062,0.00026031883,0.00010818976,0.000050014274,0.00008504229,0.00021847771,0.00006172936,0.00047091077],"category_scores_gemma":[0.00006469195,0.00011509014,0.000069636975,0.00026088452,0.00020063532,0.0005923138,0.00013248787,0.000055987384,0.00036147467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039563107,0.000041508,0.00012715299,0.00008946833,0.00001378929,0.000025019228,0.000094797135,0.000014368531,0.9968568,0.0009268922,0.00026886028,0.0015017721],"study_design_scores_gemma":[0.00007531265,0.000036977657,0.00052492245,0.0000871975,0.000025162812,0.0000059215895,0.000010781831,0.0000521445,0.993259,0.0011175715,0.0046730293,0.00013196253],"about_ca_topic_score_codex":0.00018691113,"about_ca_topic_score_gemma":0.000016659547,"teacher_disagreement_score":0.004404169,"about_ca_system_score_codex":0.000044387303,"about_ca_system_score_gemma":0.00006370454,"threshold_uncertainty_score":0.5156143},"labels":[],"label_agreement":null},{"id":"W4399979605","doi":"10.3390/v16071008","title":"SARS-CoV-2 Accessory Protein ORF8 Targets the Dimeric IgA Receptor pIgR","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Polymeric immunoglobulin receptor; Downregulation and upregulation; Receptor; Biology; Internalization; Respiratory system; Immune system; Cell biology; Immunology; Microbiology; Gene; Biochemistry; Anatomy","score_opus":0.08740284700183869,"score_gpt":0.3872143582716318,"score_spread":0.2998115112697931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399979605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9765031,0.0124970125,0.0000947697,0.0022960603,0.0006910672,0.001107401,0.000022648872,0.00045249434,0.0063354895],"genre_scores_gemma":[0.86566854,0.0000607072,0.00022356355,0.13136323,0.00127068,0.00055712054,0.000005279864,0.00012899487,0.0007219107],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979951,0.0001198857,0.0002844717,0.0004714455,0.00062440365,0.0005046892],"domain_scores_gemma":[0.99903107,0.00021579131,0.00004229104,0.00057961454,0.00009438125,0.00003688279],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004410598,0.0002441734,0.0002888118,0.00021696147,0.00016395589,0.0001930138,0.0003950161,0.00012897803,0.00014374396],"category_scores_gemma":[0.00038943312,0.00014882632,0.00015733737,0.0008309033,0.0002324058,0.00025532042,0.00017743677,0.00055714906,0.003160573],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002026874,0.00010974528,0.0016961549,0.00025411564,0.00013584025,0.00012185031,0.00037519573,5.7443394e-8,0.94247234,0.0003921072,0.043186195,0.0110537205],"study_design_scores_gemma":[0.00019702507,0.000109666726,0.000244437,0.00013154853,0.000025840087,0.000009572447,0.00004580219,0.000044549186,0.49011037,0.00016681895,0.50881344,0.000100924466],"about_ca_topic_score_codex":0.0005800814,"about_ca_topic_score_gemma":0.000042800333,"teacher_disagreement_score":0.46562725,"about_ca_system_score_codex":0.00010961104,"about_ca_system_score_gemma":0.00043012158,"threshold_uncertainty_score":0.9976156},"labels":[],"label_agreement":null},{"id":"W4400039933","doi":"10.3390/v16071031","title":"Comparative Analysis of the Clinical Presentation of Individuals Who Test Positive or Negative for SARS-CoV-2: Results from a Test Street Study","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Universiteit Utrecht","keywords":"Test (biology); Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Medicine; Presentation (obstetrics); Demography; Psychology; Virology; Biology; Internal medicine; Surgery; Outbreak; Ecology; Infectious disease (medical specialty); Sociology","score_opus":0.1305846944293789,"score_gpt":0.47046884798637595,"score_spread":0.3398841535569971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400039933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866612,0.000087241984,0.000093914,0.00057889515,0.00012448968,0.0028215249,0.009440343,0.000039664785,0.0001527099],"genre_scores_gemma":[0.9983581,0.00001060943,0.000584975,0.0006292982,0.00012451281,0.000086737295,0.00013360662,0.000016718852,0.000055499022],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99760145,0.0003776173,0.00092186115,0.00046395452,0.00047994172,0.00015520153],"domain_scores_gemma":[0.9589692,0.039735254,0.0004470158,0.0004837962,0.00031041173,0.00005437313],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00066069124,0.00020209156,0.0009768261,0.0003041194,0.00005761083,0.000037253812,0.00022914329,0.00009271287,0.00001224426],"category_scores_gemma":[0.01266545,0.00011931238,0.00032978755,0.0012771796,0.00029877387,0.0001839727,0.000119587836,0.0001883298,0.000004846947],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023980758,0.0023279898,0.93962276,0.0001246796,0.00806056,0.000022137507,0.015439905,0.0000410007,0.024678038,0.00004061944,0.0068666865,0.00037754184],"study_design_scores_gemma":[0.0032913834,0.003116391,0.77004033,0.0004838844,0.006391816,3.478982e-7,0.0018871903,0.0012532277,0.21320912,0.0001054632,0.000112488444,0.00010834465],"about_ca_topic_score_codex":0.002180641,"about_ca_topic_score_gemma":0.0030881981,"teacher_disagreement_score":0.18853109,"about_ca_system_score_codex":0.00005386892,"about_ca_system_score_gemma":0.0003453757,"threshold_uncertainty_score":0.9956513},"labels":[],"label_agreement":null},{"id":"W4400214536","doi":"10.3390/v16071050","title":"First Isolation and Molecular Characterization of Umatilla Virus (Sedoreoviridae, Orbivirus) in Brazil","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Vale Canada Limited","keywords":"Orbivirus; Virology; Biology; Isolation (microbiology); Computational biology; Virus; Bioinformatics; Reoviridae","score_opus":0.016194156387911152,"score_gpt":0.29426183248975346,"score_spread":0.2780676761018423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400214536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972071,0.00049016415,0.0012559968,0.0002025105,0.00013200927,0.00018220943,0.000022178667,0.00006467039,0.000443136],"genre_scores_gemma":[0.9990521,0.00040171386,0.00008297718,0.00031874402,0.000045634337,0.0000113850265,0.000018613657,0.000018652774,0.00005020045],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994141,0.000019156947,0.00021982235,0.00015660528,0.000096031865,0.000094307004],"domain_scores_gemma":[0.99976087,0.000030647403,0.00003681307,0.00011014238,0.000025268277,0.000036257923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008468499,0.00009161826,0.00015972264,0.00026836232,0.000027657105,0.000028656359,0.000020365196,0.00006543893,0.00013357119],"category_scores_gemma":[0.000039278766,0.000079070094,0.000035800702,0.00037045035,0.000043277647,0.00020376698,0.000018693976,0.00008638861,0.000029577775],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004356566,0.0000637702,0.03159413,0.00025128404,0.000028264816,0.000020359503,0.00027654858,0.000013124102,0.9631687,0.0009986694,0.00006451554,0.0034770772],"study_design_scores_gemma":[0.0008430952,0.0004782402,0.6004129,0.0010109204,0.0001123128,0.00005009392,0.000042467873,0.014460247,0.3534661,0.00023488827,0.028624713,0.00026401563],"about_ca_topic_score_codex":0.00034649347,"about_ca_topic_score_gemma":0.000115062576,"teacher_disagreement_score":0.6097026,"about_ca_system_score_codex":0.00003026401,"about_ca_system_score_gemma":0.000029053142,"threshold_uncertainty_score":0.3224385},"labels":[],"label_agreement":null},{"id":"W4400323782","doi":"10.3390/v16071078","title":"Safety and Immunogenicity of Morbillivirus canis Vaccines for Domestic and Wild Animals: A Scoping Review","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Universidad de Antioquia; Ministerio de Ciencia, Tecnología e Innovación","keywords":"Canine distemper; Immunogenicity; Vaccination; Virology; Morbillivirus; Biology; Canis; Immunization; Measles virus; Virus; Measles; Immunology; Antigen","score_opus":0.09570735813459061,"score_gpt":0.44176844242776236,"score_spread":0.34606108429317173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400323782","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018109003,0.9962233,0.0000078789335,0.00006701655,0.00010200694,0.0027679605,0.00056619104,0.00005011057,0.000034486395],"genre_scores_gemma":[0.00007573951,0.99877363,0.00010289435,0.0005843403,0.00011459983,0.00020605685,0.000039217513,0.000056579363,0.000046920308],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99825954,0.00010475877,0.00083416695,0.00046919374,0.000106503336,0.00022583667],"domain_scores_gemma":[0.99876726,0.00045922122,0.00028530718,0.0003141749,0.00005400227,0.000120009594],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031430958,0.000407916,0.0026443189,0.00014529614,0.00007823218,0.000014470831,0.000092327464,0.0002167148,0.000053371907],"category_scores_gemma":[0.00069880264,0.0002728259,0.00036712858,0.00020950423,0.00014592556,0.000057836176,0.0001281057,0.00020758038,0.000011889451],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017596009,0.000044009732,0.000079237114,0.76303285,0.00064976176,0.000032427233,0.000011248881,1.3783036e-8,0.000018852226,0.00015535034,0.00042421295,0.23537605],"study_design_scores_gemma":[0.00045550102,0.00043808,0.00014894883,0.657724,0.017483216,0.0002727208,0.000003762243,0.0000014987976,0.0000061037777,0.00007401445,0.32311746,0.00027469982],"about_ca_topic_score_codex":0.00007545088,"about_ca_topic_score_gemma":0.000027320719,"teacher_disagreement_score":0.32269326,"about_ca_system_score_codex":0.000026871614,"about_ca_system_score_gemma":0.00037668517,"threshold_uncertainty_score":0.9999724},"labels":[],"label_agreement":null},{"id":"W4400323905","doi":"10.3390/v16071076","title":"Downregulation of miRNA-26a by HIV-1 Enhances CD59 Expression and Packaging, Impacting Virus Susceptibility to Antibody-Dependent Complement-Mediated Lysis","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Université de Montréal; Montreal Clinical Research Institute","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Downregulation and upregulation; CD59; microRNA; Complement (music); Lysis; Human immunodeficiency virus (HIV); Virus; Antibody; Virology; Immunology; Biology; Cancer research; Complement system; Chemistry; Genetics; Gene; Phenotype","score_opus":0.016053988500973986,"score_gpt":0.3145295781421058,"score_spread":0.2984755896411318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400323905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953991,0.0020321675,0.0018280556,0.000059858703,0.00009568034,0.00014868464,0.00035055907,0.00002263071,0.00006324793],"genre_scores_gemma":[0.9986637,0.0004541678,0.00021382376,0.00013974927,0.000082895465,0.000009248988,0.00030970623,0.000013902563,0.000112784444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895215,0.00005786684,0.00026334106,0.00039372465,0.0001488231,0.00018409354],"domain_scores_gemma":[0.9995285,0.00003297103,0.00007198059,0.00022942845,0.000059938324,0.000077159835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018819227,0.00014741208,0.00015735005,0.00007096874,0.00005859566,0.00005869505,0.00011101494,0.00007675307,0.000115541574],"category_scores_gemma":[0.000061947554,0.00012570723,0.000056141915,0.00009601425,0.000049418253,0.000018811095,0.00012431791,0.000054245647,0.000023104225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007155285,0.000039054346,0.011413884,0.000047676655,0.00006203606,0.0000011959438,0.00017208002,0.000009362106,0.9822907,0.0000037869916,0.0040551126,0.0018335934],"study_design_scores_gemma":[0.00014504425,0.00020698251,0.0038018855,0.00009536873,0.000022961827,0.0000016971582,0.0002258827,0.00007267136,0.989865,0.000018454793,0.0053975377,0.00014651177],"about_ca_topic_score_codex":0.00025783546,"about_ca_topic_score_gemma":0.00014435394,"teacher_disagreement_score":0.007611999,"about_ca_system_score_codex":0.00001378814,"about_ca_system_score_gemma":0.000027273052,"threshold_uncertainty_score":0.5126192},"labels":[],"label_agreement":null},{"id":"W4400354462","doi":"10.3390/v16071081","title":"Evolution of RNA Viruses: Reasons for the Existence of Separate Plus, Minus, and Double-Strand Replication Strategies","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Capsid; Virology; RNA; Multiplicity of infection; Polymerase; Viral replication; Biology; Single strand; RNA polymerase; Multiplicity (mathematics); Virus; Viral evolution; DNA; Genetics; Gene","score_opus":0.0895933711425545,"score_gpt":0.3230683599593169,"score_spread":0.23347498881676237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400354462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98981285,0.008126668,0.00024007211,0.00021223714,0.00008626278,0.000367663,0.00019495902,0.000056685407,0.0009026062],"genre_scores_gemma":[0.9989319,0.00070792536,0.00010160089,0.00002262837,0.00008280823,0.00006834853,0.000003162709,0.0000010634286,0.00008056192],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993585,0.00002148594,0.00019845717,0.00021983207,0.00009430751,0.00010745633],"domain_scores_gemma":[0.99926996,0.00046447522,0.00008430242,0.0000796263,0.00008338211,0.00001826535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022132961,0.000090143934,0.00013280753,0.000013938712,0.00019290895,0.000051622654,0.00010838104,0.000045984703,0.000018238921],"category_scores_gemma":[0.000050005478,0.00003167512,0.000060307448,0.00025245242,0.00024001411,0.00021013533,0.00003834569,0.000046436202,0.000003373461],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034062282,0.00004991742,0.0032932484,0.00013357127,0.0001024533,3.593484e-7,0.0004004831,0.000060337814,0.9043779,0.07901924,0.0014318879,0.010790021],"study_design_scores_gemma":[0.001135059,0.0026549094,0.376452,0.00074457773,0.0006427253,0.00003271264,0.01657129,0.0027237253,0.3529426,0.019727176,0.22551303,0.00086021895],"about_ca_topic_score_codex":0.0017567759,"about_ca_topic_score_gemma":0.0014217034,"teacher_disagreement_score":0.5514353,"about_ca_system_score_codex":0.000023010485,"about_ca_system_score_gemma":0.000023591216,"threshold_uncertainty_score":0.26557314},"labels":[],"label_agreement":null},{"id":"W4400649010","doi":"10.3390/v16071133","title":"Host–Virus Cophylogenetic Trajectories: Investigating Molecular Relationships between Coronaviruses and Bat Hosts","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec; Université de Sherbrooke","keywords":"Host (biology); Virology; Biology; Coronavirus disease 2019 (COVID-19); Virus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Coronavirus; Evolutionary biology; Computational biology; Genetics; Medicine; Outbreak; Infectious disease (medical specialty)","score_opus":0.1117388005055462,"score_gpt":0.3711814991316196,"score_spread":0.2594426986260734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400649010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9827485,0.015156209,0.00012965169,0.00018963264,0.00015237009,0.00039403656,0.00006306616,0.00026242944,0.0009041165],"genre_scores_gemma":[0.98609483,0.00004339795,0.00040886767,0.013020955,0.00028944825,0.000051359413,0.000005606384,0.00006889935,0.000016663058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818856,0.00015003758,0.00033143914,0.00048591956,0.00047002986,0.00037400133],"domain_scores_gemma":[0.998614,0.0008124892,0.000040739054,0.00033223486,0.000077263416,0.00012325445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036369258,0.00024381698,0.00032330272,0.00027125067,0.00018330856,0.00016067181,0.00012750672,0.00018341886,0.00001864027],"category_scores_gemma":[0.00067735167,0.00021676363,0.0000804033,0.00061265664,0.00032631526,0.00016511197,0.00009687336,0.000549877,0.0002004378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026542966,0.000022335751,0.47989485,0.0002670824,0.00012215422,0.00017080517,0.0006527236,3.9329666e-7,0.51543164,0.000741499,0.00021954803,0.0024504105],"study_design_scores_gemma":[0.00059842615,0.0003568135,0.1582363,0.00051735947,0.0002303861,0.000051367664,0.00025854772,0.000090139,0.7434402,0.00088932074,0.09499668,0.00033445115],"about_ca_topic_score_codex":0.00046133515,"about_ca_topic_score_gemma":0.00005143351,"teacher_disagreement_score":0.32165855,"about_ca_system_score_codex":0.000086846965,"about_ca_system_score_gemma":0.00035161286,"threshold_uncertainty_score":0.8839364},"labels":[],"label_agreement":null},{"id":"W4400777719","doi":"10.3390/v16071156","title":"A Marek’s Disease Virus Messenger RNA-Based Vaccine Modulates Local and Systemic Immune Responses in Chickens","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Veterinary College, University of Guelph; Ontario Agri-Food Innovation Alliance","keywords":"Virology; Marek's disease; Spleen; Vaccination; Biology; Virus; Interferon; Immunization; Immune system; Innate immune system; MDA5; Immunology; IRF7; Gene; RNA interference; RNA","score_opus":0.017960292080463902,"score_gpt":0.29532421578439877,"score_spread":0.27736392370393487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400777719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9757391,0.022671362,0.00015105515,0.00038695493,0.00020337844,0.00039810035,0.00010771294,0.00021203575,0.00013024833],"genre_scores_gemma":[0.9983943,0.0006256866,0.00006195864,0.0003346555,0.00006252433,0.00009739478,0.00001947991,0.00004551273,0.00035847924],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99884176,0.000094969844,0.00030752082,0.00035381364,0.0001565949,0.00024531057],"domain_scores_gemma":[0.9992242,0.00022339796,0.000028889985,0.00030552314,0.000031619347,0.00018636225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017048443,0.00021789235,0.0003221152,0.00038696817,0.000072126255,0.00005616337,0.000039947725,0.00008337225,0.00022853872],"category_scores_gemma":[0.000099533085,0.00016597766,0.00008340057,0.0003489144,0.000059535556,0.00012095771,0.000033280787,0.00018130521,0.00014979765],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013334873,0.003979858,0.5544526,0.00545051,0.0019353413,0.018153803,0.0011187954,0.00088377966,0.24158418,0.0018979373,0.0024618066,0.15474653],"study_design_scores_gemma":[0.008325366,0.00080338,0.86150193,0.006989509,0.0011283335,0.00041441972,0.00023111203,0.01775015,0.05442512,0.0004115158,0.047121104,0.0008980529],"about_ca_topic_score_codex":0.00093298324,"about_ca_topic_score_gemma":0.00013442134,"teacher_disagreement_score":0.30704936,"about_ca_system_score_codex":0.00013855993,"about_ca_system_score_gemma":0.00019502638,"threshold_uncertainty_score":0.67683727},"labels":[],"label_agreement":null},{"id":"W4400886163","doi":"10.3390/v16071167","title":"NTB-A and 2B4 Natural Killer Cell Receptors Modulate the Capacity of a Cocktail of Non-Neutralizing Antibodies and a Small CD4-Mimetic to Eliminate HIV-1-Infected Cells by Antibody-Dependent Cellular Cytotoxicity","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Mitacs","keywords":"Antibody-dependent cell-mediated cytotoxicity; Epitope; Receptor; CD16; Antibody; Fc receptor; Cell biology; Chemistry; Tetherin; Biology; Virology; Immune system; Immunology; Viral envelope; Monoclonal antibody; Biochemistry; CD3; CD8","score_opus":0.013035469528675027,"score_gpt":0.23782406307114537,"score_spread":0.22478859354247036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400886163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99057686,0.0057221586,0.00029713035,0.000115087794,0.002697756,0.00034053935,0.000040772873,0.000055987774,0.00015371323],"genre_scores_gemma":[0.9953827,0.0009694721,0.00005414088,0.00014546613,0.00001559593,0.000007746671,0.000038909497,0.000024249633,0.0033616668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987027,0.00020521479,0.0004082044,0.00035516886,0.000053739022,0.00027494197],"domain_scores_gemma":[0.9992911,0.00022782656,0.00014564044,0.00022416371,0.000082854844,0.000028401628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000253999,0.00025172957,0.00037133676,0.00019120975,0.00015570372,0.00004112889,0.00012828193,0.000174261,0.00016770227],"category_scores_gemma":[0.000035884073,0.00018295243,0.00009489428,0.00018558824,0.00028247904,0.00014484036,0.00012917332,0.00037260176,0.00007508949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017963153,0.0000902958,0.00091330946,0.00020425678,0.00015786277,0.000001962722,0.0014065882,0.000014703375,0.992705,0.000037195343,0.0040605385,0.00022865647],"study_design_scores_gemma":[0.0004195773,0.0002494217,0.002005207,0.00016604211,0.00010847204,0.000016072483,0.000398125,0.00014725473,0.986518,0.000010685095,0.009764104,0.00019698482],"about_ca_topic_score_codex":0.0006398302,"about_ca_topic_score_gemma":0.000023757277,"teacher_disagreement_score":0.006186946,"about_ca_system_score_codex":0.000025239902,"about_ca_system_score_gemma":0.000020349513,"threshold_uncertainty_score":0.74605834},"labels":[],"label_agreement":null},{"id":"W4400981921","doi":"10.3390/v16081192","title":"Semi-Covariance Coefficient Analysis of Spike Proteins from SARS-CoV-2 and Its Variants Omicron, BA.5, EG.5, and JN.1 for Viral Infectivity, Virulence and Immune Escape","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Fractal and DNA sequence analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Carleton University; National Research Council Canada; Western University","funders":"National Research Council Canada; Canadian Institutes of Health Research","keywords":"Infectivity; Virulence; Biology; Immune system; Coronavirus; Virology; Virus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Genetics; Gene; Medicine; Disease; Infectious disease (medical specialty)","score_opus":0.01860387207278936,"score_gpt":0.28693354830425705,"score_spread":0.2683296762314677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400981921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97723395,0.015103546,0.0067538414,0.000070315014,0.00005209391,0.00024422194,0.0004993409,0.000014530331,0.00002813638],"genre_scores_gemma":[0.99769074,0.001505775,0.00041081454,0.00019107077,0.000052923097,0.000033434804,0.0000700943,0.000016116484,0.000029010942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988725,0.000042501448,0.00025520846,0.0005436399,0.0000960767,0.00019006348],"domain_scores_gemma":[0.99951977,0.000059389076,0.00009058625,0.00022348209,0.00006312503,0.000043630735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001938686,0.00019046856,0.00035024295,0.00014693885,0.00008199313,0.00008784186,0.0000971043,0.00013482432,0.000007405214],"category_scores_gemma":[0.00010653643,0.000167821,0.000108079636,0.00030776017,0.00013964286,0.000030097439,0.00016886821,0.000069197566,0.0000019032518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008685805,0.000059415044,0.0021771078,0.00007795889,0.00075752824,0.000003908325,0.00007416851,0.0000601383,0.99440575,0.00019615125,0.000032050997,0.0020689645],"study_design_scores_gemma":[0.00028779503,0.00022140927,0.009891251,0.00006517407,0.00077279005,0.0000037491102,0.000022054823,0.010515945,0.97630787,0.00026324973,0.0014250637,0.00022364018],"about_ca_topic_score_codex":0.00084559445,"about_ca_topic_score_gemma":0.00029872602,"teacher_disagreement_score":0.020456785,"about_ca_system_score_codex":0.000009151896,"about_ca_system_score_gemma":0.000044571065,"threshold_uncertainty_score":0.6843542},"labels":[],"label_agreement":null},{"id":"W4400983525","doi":"10.3390/v16081193","title":"Host Jump of an Exotic Fish Rhabdovirus into a New Class of Animals Poses a Disease Threat to Amphibians","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Fisheries and Oceans Canada","funders":"U.S. Geological Survey; U.S. Fish and Wildlife Service; Centre for Environment, Fisheries and Aquaculture Science","keywords":"Host (biology); Biology; Fish <Actinopterygii>; Zoology; Jump; Class (philosophy); Fishery; Disease; Ecology; Medicine; Computer science; Artificial intelligence","score_opus":0.056521771638941155,"score_gpt":0.34126832299747756,"score_spread":0.2847465513585364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400983525","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965879,0.0013840396,0.00011160906,0.00076628267,0.00020856615,0.00031577863,0.0001172459,0.0001298575,0.00037875108],"genre_scores_gemma":[0.99821436,0.00009639747,0.0003115289,0.000799039,0.00018084695,0.000012147082,0.0000064024734,0.0000347575,0.00034449252],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990437,0.000030180174,0.00029602917,0.0002635146,0.000193278,0.00017331845],"domain_scores_gemma":[0.99912643,0.000067268404,0.000043031105,0.00033906955,0.00006773372,0.00035645257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007726391,0.00015418048,0.00031809765,0.00030432947,0.00003774296,0.000030625102,0.00008249505,0.00005609718,0.00034788842],"category_scores_gemma":[0.00016384703,0.00012372769,0.00014102623,0.00055325835,0.00007676475,0.00016698038,0.000046008136,0.00008818295,0.00006810797],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014399264,0.0011237566,0.08108415,0.0016259096,0.00042919395,0.00041765903,0.0027589868,0.00006989544,0.8693263,0.0030382609,0.019707158,0.018978788],"study_design_scores_gemma":[0.0018374533,0.007531373,0.68981934,0.0031068334,0.0014655762,0.00009855005,0.00093983335,0.0006825926,0.19583406,0.0012922287,0.09662242,0.0007697484],"about_ca_topic_score_codex":0.0030901048,"about_ca_topic_score_gemma":0.0013345892,"teacher_disagreement_score":0.67349225,"about_ca_system_score_codex":0.000048968748,"about_ca_system_score_gemma":0.00023871317,"threshold_uncertainty_score":0.5045469},"labels":[],"label_agreement":null},{"id":"W4401120023","doi":"10.3390/v16081220","title":"Poly(rC)-Binding Protein 2 Does Not Directly Participate in HCV Translation or Replication, but Rather Modulates Genome Packaging","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; McGill University","funders":"Canadian Institutes of Health Research; University of Alberta; Canada Research Chairs; McGill University","keywords":"Replication (statistics); Translation (biology); Genome; Cell biology; Chemistry; Biology; Virology; Genetics; Messenger RNA; Gene","score_opus":0.12094352354567417,"score_gpt":0.3848981945478234,"score_spread":0.26395467100214925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401120023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935073,0.0015152832,0.00024475998,0.0022743251,0.000079191894,0.0010521307,0.00007866414,0.00030712687,0.00094117987],"genre_scores_gemma":[0.9943152,0.00018840849,0.00075295,0.00023514108,0.00017569207,0.0004073792,0.000025917088,0.00007570673,0.003823628],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798846,0.00013325416,0.0004530128,0.000565311,0.0004025963,0.00045733413],"domain_scores_gemma":[0.99908364,0.000167096,0.000043604785,0.00050657796,0.000059464193,0.0001396034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068936055,0.0001881074,0.00028302026,0.00041926786,0.000085854444,0.00013142475,0.00011447878,0.00010171231,0.0006078266],"category_scores_gemma":[0.00037560772,0.00012876495,0.00006472239,0.0006503567,0.00007391906,0.00034144492,0.000033100794,0.00029067622,0.0003834779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021242122,0.000067498426,0.011609531,0.0002506991,0.00005551748,0.00014694314,0.0016429294,0.0000050082112,0.8966854,0.000108027176,0.00001991553,0.08919611],"study_design_scores_gemma":[0.0007120408,0.00014425516,0.008703101,0.00070690614,0.000047099904,0.0000070283845,0.0001243065,0.00540018,0.9532541,0.00018230578,0.030437356,0.0002813235],"about_ca_topic_score_codex":0.0008454795,"about_ca_topic_score_gemma":0.00052215136,"teacher_disagreement_score":0.08891478,"about_ca_system_score_codex":0.00020108483,"about_ca_system_score_gemma":0.00025870732,"threshold_uncertainty_score":0.66552746},"labels":[],"label_agreement":null},{"id":"W4401162253","doi":"10.3390/v16081230","title":"Phylogenetic Network Analyses Reveal the Influence of Transmission Clustering on the Spread of HIV Drug Resistance in Quebec from 2002 to 2022","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Gilead Sciences (Canada); McGill University Health Centre; Centre Hospitalier de l’Université de Montréal; McGill University","funders":"","keywords":"Resistance mutation; Viremia; Transmission (telecommunications); Drug resistance; Darunavir; Virology; Human immunodeficiency virus (HIV); Viral load; Antiretroviral therapy; Integrase; Reverse transcriptase; Biology; Integrase inhibitor; Men who have sex with men; Internal medicine; Medicine; Genetics; RNA; Gene","score_opus":0.02891737647592999,"score_gpt":0.3010664767379857,"score_spread":0.2721491002620557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401162253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874542,0.006568888,0.000071361115,0.0048706806,0.000041897427,0.00034042582,0.000022470313,0.000016548249,0.00061356847],"genre_scores_gemma":[0.9817269,0.00031344587,0.0008428027,0.0004248921,0.000056741144,0.000034693217,0.0000042510833,0.000014667523,0.016581597],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99902326,0.00009089234,0.00030076274,0.00019648099,0.0002427655,0.0001458285],"domain_scores_gemma":[0.99918455,0.00042954358,0.000047202695,0.00027618062,0.000022898468,0.00003961584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018926612,0.00012320103,0.00022931753,0.00008264235,0.000041351894,0.000012387015,0.00013204565,0.000028190661,0.00015705342],"category_scores_gemma":[0.0000371418,0.0000631485,0.00005962466,0.00049852463,0.00005360005,0.000030560295,0.000032281565,0.000106401436,0.000029867238],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038407426,0.0008022108,0.10082438,0.0011457587,0.0016334208,0.0003778999,0.047100347,0.043015588,0.51999617,0.00087908725,0.2356839,0.0447005],"study_design_scores_gemma":[0.0015830977,0.00014850571,0.4699768,0.014385522,0.0006091817,0.0000024243923,0.0011210744,0.0009404078,0.26020765,0.00067888293,0.24985544,0.0004909869],"about_ca_topic_score_codex":0.0021653185,"about_ca_topic_score_gemma":0.010076655,"teacher_disagreement_score":0.36915246,"about_ca_system_score_codex":0.000049056798,"about_ca_system_score_gemma":0.00008077693,"threshold_uncertainty_score":0.562301},"labels":[],"label_agreement":null},{"id":"W4401178434","doi":"10.3390/v16081224","title":"Bridging Hepatitis C Care Gaps: A Modeling Approach for Achieving the WHO’s Targets in Ontario, Canada","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; BC Centre for Disease Control; Jewish General Hospital; University of Waterloo; McGill University; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Bridging (networking); Hepatitis C; Virology; Medicine; Computer science; Computer security","score_opus":0.05166458014935883,"score_gpt":0.3093535302470906,"score_spread":0.2576889500977318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401178434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95269334,0.014038252,0.020321157,0.0010344771,0.00040110332,0.0019284425,0.00016248638,0.00014333749,0.009277373],"genre_scores_gemma":[0.9963777,0.00021261709,0.0014083845,0.0009854133,0.00020122445,0.00027375008,0.000061690225,0.000056493944,0.00042269676],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9983207,0.00005662185,0.00029008999,0.00037692935,0.00046246912,0.0004931882],"domain_scores_gemma":[0.99932814,0.00014713686,0.000019297711,0.00029548112,0.00009461264,0.00011533104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002942499,0.000171396,0.00027948545,0.00016220826,0.00015832264,0.00011179821,0.00016824131,0.000065999106,0.000091048445],"category_scores_gemma":[0.0002283275,0.00012841956,0.00007850684,0.0002551673,0.00003360958,0.0001497193,0.00008207557,0.00052350096,0.0000057372617],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003626837,0.00015271263,0.7467702,0.0044215783,0.000530149,0.0011050109,0.02636716,0.03551718,0.003402241,0.0011907221,0.03218095,0.14799944],"study_design_scores_gemma":[0.0007562182,0.00012164256,0.008829252,0.0011393352,0.00007684013,0.000022590417,0.0011518971,0.8602287,0.0010937348,0.000034215896,0.12618914,0.00035638627],"about_ca_topic_score_codex":0.9933426,"about_ca_topic_score_gemma":0.9970481,"teacher_disagreement_score":0.82471156,"about_ca_system_score_codex":0.0013720284,"about_ca_system_score_gemma":0.0027807036,"threshold_uncertainty_score":0.5236798},"labels":[],"label_agreement":null},{"id":"W4401335777","doi":"10.3390/v16081249","title":"Isolation and Genetic Characterization of Genotype VII Velogenic Pathotype Newcastle Disease Virus from Commercial Chicken Farms in Central Ethiopia, Distinct from the Local Vaccine Strains","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"International Atomic Energy Agency","keywords":"Embryonated; Newcastle disease; Virology; Genotype; Virulence; Biology; Outbreak; Virus; Vaccination; Gene; Genetics","score_opus":0.02589056748116205,"score_gpt":0.28000189676342957,"score_spread":0.25411132928226754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401335777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99216884,0.0029961998,0.0018764529,0.0006257506,0.0002510103,0.00027649963,0.0017541975,0.000042309865,0.00000872517],"genre_scores_gemma":[0.9972045,0.00042597495,0.000052812724,0.0010721144,0.00036276158,0.000011165209,0.00084145664,0.000022258222,0.0000069785638],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902064,0.000118301476,0.00027836525,0.0002722322,0.00012947514,0.00018098418],"domain_scores_gemma":[0.9994928,0.000116043855,0.000055878518,0.00019476976,0.000021138092,0.00011937339],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004883882,0.00015177105,0.00021952426,0.00005574449,0.000063240426,0.000021934027,0.000077633136,0.000108551154,0.0003548771],"category_scores_gemma":[0.00007815338,0.00011034466,0.00005620496,0.00014698687,0.00010393046,0.000099075274,0.000049755472,0.00020113107,0.000028490176],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014398774,0.00017230984,0.6755597,0.00005582801,0.000098358316,0.0001006481,0.00090555765,0.000013499615,0.29193476,0.000084550906,0.000044028806,0.02959087],"study_design_scores_gemma":[0.00069356564,0.00012241362,0.99383646,0.00011850584,0.00027546915,0.0000017315238,0.000033909444,0.0026424022,0.0012206148,0.00043207683,0.00051623344,0.00010663036],"about_ca_topic_score_codex":0.0013347818,"about_ca_topic_score_gemma":0.001243535,"teacher_disagreement_score":0.31827673,"about_ca_system_score_codex":0.0000281014,"about_ca_system_score_gemma":0.00012463349,"threshold_uncertainty_score":0.44997248},"labels":[],"label_agreement":null},{"id":"W4401337713","doi":"10.3390/v16081250","title":"Pharmacophore-Assisted Covalent Docking Identifies a Potential Covalent Inhibitor for Drug-Resistant Genotype 3 Variants of Hepatitis C Viral NS3/4A Serine Protease","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"Higher Education Commission, Pakistan; University of Pittsburgh","keywords":"Pharmacophore; NS3; Serine protease; Covalent bond; Docking (animal); Virology; Chemistry; Serine; Genotype; Computational biology; Hepatitis C virus; Biology; Protease; Stereochemistry; Biochemistry; Enzyme; Virus; Medicine; Gene","score_opus":0.041152566299362196,"score_gpt":0.35334739481567895,"score_spread":0.31219482851631675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401337713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98838925,0.0039196317,0.00090365676,0.0005476983,0.0014301848,0.002879895,0.0014220582,0.00025880855,0.00024879887],"genre_scores_gemma":[0.9947548,0.0012552728,0.0012081658,0.0002699932,0.00073319435,0.00054629066,0.00010986916,0.00012519435,0.0009972431],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99647903,0.00017956005,0.0009179467,0.00068603636,0.0010727195,0.00066472776],"domain_scores_gemma":[0.9984211,0.00017813483,0.00015786628,0.0004771009,0.00044712456,0.00031872516],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00069028314,0.0003676668,0.0006444631,0.0005216622,0.00018836443,0.00017640494,0.0002442013,0.00012816192,0.0008173925],"category_scores_gemma":[0.00038741485,0.00033076247,0.0003326398,0.0005471511,0.00021570377,0.00033069332,0.00021567439,0.00035135687,0.00012178571],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002820242,0.0005357314,0.0037673758,0.0043390123,0.0006965387,0.0011441726,0.00044425184,0.000029091798,0.95192444,0.00023666421,0.012017015,0.022045473],"study_design_scores_gemma":[0.0051517016,0.0011879051,0.02560373,0.0025325343,0.00078241824,0.00008175073,0.0001012247,0.0071389233,0.86284983,0.00022143811,0.093683794,0.0006647187],"about_ca_topic_score_codex":0.0021110708,"about_ca_topic_score_gemma":0.00026372416,"teacher_disagreement_score":0.089074574,"about_ca_system_score_codex":0.0003010625,"about_ca_system_score_gemma":0.0006893701,"threshold_uncertainty_score":0.99991447},"labels":[],"label_agreement":null},{"id":"W4401393553","doi":"10.3390/v16081265","title":"A Retrospective Analysis Reveals That the 2021 Outbreaks of African Swine Fever Virus in Ghana Were Caused by Two Distinct Genotypes","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Oak Ridge Institute for Science and Education; U.S. Department of Agriculture","keywords":"Outbreak; African swine fever virus; Genotype; Virology; Domestication; Biology; African swine fever; Population; Virus; Veterinary medicine; Genetics; Gene; Medicine; Environmental health","score_opus":0.034905008232971005,"score_gpt":0.2760409241404082,"score_spread":0.24113591590743721,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401393553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99382275,0.002350846,0.00001193157,0.001489028,0.000057430447,0.00016313705,0.0004031953,0.00003688884,0.0016647849],"genre_scores_gemma":[0.99870956,0.00014581831,0.0000065083414,0.00039373763,0.00012018489,0.000020465717,0.000061457846,0.0000015273845,0.0005407192],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987644,0.00019508437,0.0002618529,0.00035820526,0.00016580567,0.00025465735],"domain_scores_gemma":[0.9994308,0.0003143022,0.000090111804,0.00008884453,0.000023136123,0.00005282238],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040252227,0.00015259587,0.00035752894,0.000044162887,0.00008669338,0.00004879647,0.00025614144,0.000052137813,0.0016392623],"category_scores_gemma":[0.00010260933,0.00005032523,0.00019627987,0.0010875466,0.00011507525,0.0000994315,0.00011771717,0.00011188212,0.00005408078],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072537536,0.00011262323,0.9145844,0.000017463848,0.00063477,0.000024568588,0.0002315287,0.0000106865655,0.061667178,0.0020117362,0.01418109,0.006451395],"study_design_scores_gemma":[0.000058023685,0.000069506874,0.9879048,0.00001677015,0.00028522022,1.4736118e-7,0.00044445877,0.00018772247,0.00043365735,0.0008850956,0.009578276,0.00013633168],"about_ca_topic_score_codex":0.00909969,"about_ca_topic_score_gemma":0.018060414,"teacher_disagreement_score":0.07332037,"about_ca_system_score_codex":0.00004860319,"about_ca_system_score_gemma":0.0000054992265,"threshold_uncertainty_score":0.9998574},"labels":[],"label_agreement":null},{"id":"W4401518471","doi":"10.3390/v16081280","title":"Genomic Characterization of Three Canadian Mumps Outbreaks Demonstrates Endemic Transmission in Canada","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Memorial University of Newfoundland; Nova Scotia Health Authority; Dalhousie University; Manitoba Health; University of Manitoba","funders":"Canadian Immunization Research Network","keywords":"Outbreak; Vaccination; Genotype; Virology; Mumps virus; Biology; Genetics; Virus; Gene","score_opus":0.020731904235900496,"score_gpt":0.24570802375725237,"score_spread":0.22497611952135188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401518471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997196,0.0015633844,0.000037152982,0.00045133109,0.00011815214,0.00013924156,0.00014810832,0.000019093552,0.00032750034],"genre_scores_gemma":[0.9988369,0.00014965907,0.0000136292365,0.00085189845,0.000038152826,0.0000068169907,0.00006269852,0.000011867205,0.00002837706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99942464,0.000018763956,0.00018337158,0.00013852499,0.000069971655,0.00016473114],"domain_scores_gemma":[0.999718,0.000024887264,0.00001815006,0.0000848483,0.000011373353,0.0001427383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000043568885,0.00008383251,0.00014965977,0.0001522052,0.000023373084,0.0000048523866,0.000046365392,0.000064052874,0.00028242354],"category_scores_gemma":[0.000011905107,0.000071567505,0.000028284847,0.00012915752,0.00003129389,0.00006631137,0.0000044410895,0.00011001617,0.000014366226],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007376389,0.000015972939,0.5644448,0.00012629355,0.000033462988,0.00014800807,0.00006734127,0.000008822592,0.41651717,0.00013508945,0.00011388582,0.01831542],"study_design_scores_gemma":[0.00020348305,0.000042662145,0.97865754,0.00019403423,0.00006194184,0.000010151338,0.000026455651,0.0012239859,0.01505884,0.000079176,0.00436608,0.0000756583],"about_ca_topic_score_codex":0.97094095,"about_ca_topic_score_gemma":0.9918902,"teacher_disagreement_score":0.41421276,"about_ca_system_score_codex":0.00018670938,"about_ca_system_score_gemma":0.002912969,"threshold_uncertainty_score":0.5167482},"labels":[],"label_agreement":null},{"id":"W4401520588","doi":"10.3390/v16081282","title":"Human Stimulator of Interferon Genes Promotes Rhinovirus C Replication in Mouse Cells In Vitro and In Vivo","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; University of Maryland; York University; AstraZeneca","keywords":"Biology; In vivo; Rhinovirus; Virology; Virus; Interferon; Viral replication; Genetically modified mouse; In vitro; Titer; Transgene; Gene; Immunology; Genetics","score_opus":0.024052168446626766,"score_gpt":0.2930880094330523,"score_spread":0.2690358409864255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401520588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912469,0.00819274,0.0000032106773,0.000034215,0.00013284395,0.00022290621,0.000045555542,0.000034891673,0.000086728964],"genre_scores_gemma":[0.9988464,0.00018896935,0.000015769894,0.00005574578,0.000006285057,0.000025231066,0.0000068900986,0.000015801923,0.0008389014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989459,0.00016986755,0.00038313647,0.00029723175,0.000019323847,0.00018454471],"domain_scores_gemma":[0.99957615,0.00011329679,0.000044911616,0.00024462742,0.000013375011,0.000007638308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026327794,0.00012740659,0.00024273508,0.00047512143,0.000018538009,0.000016435863,0.00011762912,0.00014793346,0.00013165419],"category_scores_gemma":[0.000045037566,0.00011521083,0.00002863823,0.0001564069,0.00011655669,0.00012562751,0.00007621117,0.00020032952,0.000043095322],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006887748,0.00013438247,0.0018423739,0.000073149415,0.000017661405,0.000006930411,0.0006144788,0.0000048369166,0.99449915,0.00012348325,0.00009574813,0.0018990397],"study_design_scores_gemma":[0.00052835105,0.00018693188,0.0024476608,0.00015126012,0.000004527592,0.0000066598836,0.00012966429,0.000034459914,0.99375325,0.000037469385,0.0026113512,0.00010838187],"about_ca_topic_score_codex":0.00085260894,"about_ca_topic_score_gemma":0.0003776107,"teacher_disagreement_score":0.008003771,"about_ca_system_score_codex":0.00004955158,"about_ca_system_score_gemma":0.000031496555,"threshold_uncertainty_score":0.46981615},"labels":[],"label_agreement":null},{"id":"W4401537043","doi":"10.3390/v16081293","title":"A Standardized Pipeline for Assembly and Annotation of African Swine Fever Virus Genome","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Oak Ridge Institute for Science and Education; Oak Ridge Associated Universities; U.S. Department of Agriculture; U.S. Department of Energy","keywords":"Annotation; Genome; Pipeline (software); African swine fever virus; Sequence assembly; Reference genome; Outbreak; Computational biology; DNA sequencing; Whole genome sequencing; Computer science; Biology; Genetics; Virus; Virology; DNA; Gene","score_opus":0.05077980021641147,"score_gpt":0.2934292686659484,"score_spread":0.2426494684495369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401537043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99542093,0.001973889,0.0005077377,0.00089412247,0.000056081695,0.00020696415,0.00043088122,0.00006338985,0.00044600922],"genre_scores_gemma":[0.9987934,0.00021028687,0.0001590846,0.0003940916,0.00015972409,0.000019766989,0.000054919416,9.5234486e-7,0.00020776383],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994528,0.000032034637,0.00015610766,0.00017207737,0.00006328286,0.00012369746],"domain_scores_gemma":[0.99963,0.00024308136,0.00003601109,0.000020576503,0.000031671898,0.000038708284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021887304,0.0000729588,0.00014653901,0.00001599793,0.000050583985,0.000027002325,0.0000569304,0.000032229036,0.00012900756],"category_scores_gemma":[0.00008100062,0.000027717491,0.00005514838,0.00013900515,0.0000402523,0.00009360801,0.000033864922,0.000023609584,0.000008055797],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003072227,0.00004399,0.0016449245,0.00008045801,0.00004996877,0.0000032389269,0.00007741192,0.000005722629,0.9315164,0.0055903518,0.0076402114,0.05304009],"study_design_scores_gemma":[0.00038157133,0.0005774066,0.23974729,0.000040762807,0.00012334713,0.0000012413067,0.00030307006,0.0027921423,0.004152724,0.0088958675,0.7426898,0.00029479316],"about_ca_topic_score_codex":0.00014062654,"about_ca_topic_score_gemma":0.000115732684,"teacher_disagreement_score":0.9273637,"about_ca_system_score_codex":0.0000071456325,"about_ca_system_score_gemma":0.0000039702827,"threshold_uncertainty_score":0.14125423},"labels":[],"label_agreement":null},{"id":"W4401618645","doi":"10.3390/v16081300","title":"Whole-Genome Analysis of the Influenza A(H1N1)pdm09 Viruses Isolated from Influenza-like Illness Outpatients in Myanmar and Community-Acquired Oseltamivir-Resistant Strains Present from 2015 to 2019","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"International Development Research Centre; Japan Agency for Medical Research and Development","keywords":"Reassortment; Neuraminidase; Virology; Biology; Oseltamivir; Phylogenetic tree; Hemagglutinin (influenza); Virus; Genome; Neuraminidase inhibitor; H5N1 genetic structure; Influenza A virus; Clade; Gene; Genetics; Medicine; Coronavirus disease 2019 (COVID-19)","score_opus":0.08905269178665302,"score_gpt":0.38046227389785875,"score_spread":0.2914095821112057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401618645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9776338,0.011013713,0.00004040787,0.0003454996,0.0002719911,0.0012786272,0.00918497,0.00013884025,0.000092205584],"genre_scores_gemma":[0.9941631,0.00021019044,0.00014814122,0.0049049812,0.00010464975,0.00012079665,0.00015844754,0.000089099696,0.00010061401],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99503416,0.0010420164,0.0012551358,0.00073752506,0.0011896468,0.0007415239],"domain_scores_gemma":[0.99599475,0.0014916334,0.00023070128,0.0016336633,0.00031098127,0.00033827333],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00082403683,0.0005807949,0.0013421099,0.0013240684,0.0004259851,0.00022362296,0.0007696795,0.0002589148,0.00021793532],"category_scores_gemma":[0.0011375226,0.0004266331,0.00031312098,0.0031407361,0.0006239947,0.00052275485,0.001279598,0.00089193176,0.00011994443],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043777633,0.0014842104,0.33520195,0.00048304742,0.012372293,0.00011746162,0.061174892,0.002194366,0.57683444,0.00009777402,0.003054948,0.0026068797],"study_design_scores_gemma":[0.0021681706,0.00060464046,0.8946581,0.0010563247,0.0019525288,7.0681256e-7,0.004812354,0.00095960667,0.0044720746,0.00029623162,0.08838041,0.00063886866],"about_ca_topic_score_codex":0.052084547,"about_ca_topic_score_gemma":0.00814265,"teacher_disagreement_score":0.57236236,"about_ca_system_score_codex":0.00034826298,"about_ca_system_score_gemma":0.00026190348,"threshold_uncertainty_score":0.99981856},"labels":[],"label_agreement":null},{"id":"W4401683841","doi":"10.3390/v16081316","title":"Spleen Swabs for Sensitive and High-Throughput Detection of African Swine Fever Virus by Real-Time PCR","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Calgary; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Spleen; Homogenization (climate); Nucleic acid; Real-time polymerase chain reaction; Virology; African swine fever virus; Biology; Polymerase chain reaction; Virus; Immunology; Gene; Biochemistry","score_opus":0.02686516154802475,"score_gpt":0.2520301706878514,"score_spread":0.22516500913982662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401683841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975883,0.00033066788,0.00007064321,0.00067675597,0.00007315015,0.0002023483,0.0005400294,0.00009251267,0.00042559265],"genre_scores_gemma":[0.9987278,0.00032746684,0.000052459593,0.00030107694,0.00016530619,0.000015766498,0.00006562768,0.0000012581321,0.0003432644],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993163,0.000051857005,0.00015110293,0.00025353086,0.00006161412,0.00016560317],"domain_scores_gemma":[0.99950874,0.00034693343,0.000044318054,0.000027882965,0.000024107303,0.000048045946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015513522,0.00010217249,0.00017143677,0.000013664109,0.00007789001,0.00002412433,0.00005332286,0.000057549238,0.00011786073],"category_scores_gemma":[0.00004878998,0.00004194963,0.000058150228,0.00013689617,0.00007546862,0.000111886744,0.000052575553,0.000033542103,0.00004265164],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010055294,0.00002176208,0.00028835094,0.000021117678,0.000044242774,0.0000021413878,0.000025829986,7.82467e-7,0.96657306,0.00052704616,0.013869119,0.018526008],"study_design_scores_gemma":[0.00049199,0.0022532986,0.31642705,0.00009994319,0.00038668737,0.0000051825305,0.0006285457,0.0021244723,0.29004887,0.005924337,0.38079646,0.0008131586],"about_ca_topic_score_codex":0.0026199194,"about_ca_topic_score_gemma":0.00021251659,"teacher_disagreement_score":0.67652416,"about_ca_system_score_codex":0.000011680734,"about_ca_system_score_gemma":0.0000023200012,"threshold_uncertainty_score":0.3960552},"labels":[],"label_agreement":null},{"id":"W4401701911","doi":"10.3390/v16081323","title":"RETRACTED: Role of Protein VII in the Production of Infectious Bovine Adenovirus-3 Virion","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Innovation Saskatchewan","keywords":"Virology; Biology","score_opus":0.015868265309301577,"score_gpt":0.2971703222526098,"score_spread":0.28130205694330823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401701911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99332434,0.0055424976,0.000008791279,0.00014790293,0.00008840783,0.0004198464,0.000016276439,0.000014712534,0.00043721398],"genre_scores_gemma":[0.9991731,0.00032726297,0.00002006037,0.00006141676,0.00020922773,0.000057573598,0.000014120049,0.000020620342,0.000116622985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989758,0.00016544301,0.000230935,0.0002446877,0.00023278818,0.00015036178],"domain_scores_gemma":[0.9994825,0.000019479008,0.000056799025,0.0003548821,0.0000678659,0.000018488678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005660987,0.00010216419,0.00011407923,0.00013643136,0.000026291707,0.000015954041,0.00018490067,0.00012189739,0.000036069283],"category_scores_gemma":[0.00018691296,0.00007597945,0.000057512825,0.00038227404,0.00011040926,0.00000957529,0.000045572375,0.00018544863,0.00001157253],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007709788,0.0001273599,0.00080402277,0.000073430856,0.00003407767,0.0000020239415,0.00016864673,0.00003044761,0.98724663,0.00007001475,0.00028636795,0.010385999],"study_design_scores_gemma":[0.0001221584,0.0020238878,0.0010669433,0.0000685368,0.0000076306005,0.0000069915145,0.00009094142,0.000016987397,0.98178244,0.00016527888,0.0145712355,0.00007694888],"about_ca_topic_score_codex":0.00015389068,"about_ca_topic_score_gemma":0.0004224988,"teacher_disagreement_score":0.014284868,"about_ca_system_score_codex":0.000014609694,"about_ca_system_score_gemma":0.00011125476,"threshold_uncertainty_score":0.3098352},"labels":[],"label_agreement":null},{"id":"W4401868977","doi":"10.3390/v16091354","title":"Inactivation Validation of Ebola, Marburg, and Lassa Viruses in AVL and Ethanol-Treated Viral Cultures","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Marburg virus; Virology; Lassa virus; Lassa fever; Ebola virus; Medicine; Biology; Virus","score_opus":0.040919438090823754,"score_gpt":0.3703705102413926,"score_spread":0.32945107215056885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401868977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964166,0.0014211441,0.00005846863,0.00017466275,0.00004662663,0.00020748161,0.000016594387,0.000049062677,0.0016093523],"genre_scores_gemma":[0.99894965,0.00040316602,0.00005518867,0.00012171397,0.000056543493,0.000016608945,0.000012291883,0.000012804555,0.00037205342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999325,0.000053877207,0.00017569611,0.0001834118,0.00014427319,0.0001177841],"domain_scores_gemma":[0.9997056,0.00009204288,0.000025477448,0.00007923735,0.00005162328,0.000046034704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015624949,0.00009466225,0.00016456225,0.00032026798,0.000038045295,0.000051426552,0.000019334295,0.000089471694,0.00008636519],"category_scores_gemma":[0.00009844434,0.00007196843,0.000023802178,0.00030539304,0.00008598694,0.00027227905,0.0000341748,0.00015888183,0.000009441281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017652837,0.00009183639,0.07922002,0.0002708568,0.00005622178,0.000027084126,0.00032737304,0.0000044549297,0.9016573,0.0008918098,0.0006515038,0.016625023],"study_design_scores_gemma":[0.00056025106,0.0002808282,0.0562583,0.00030330705,0.00004189583,0.000042822776,0.00012494234,0.00036495875,0.93454045,0.00036021706,0.0070289825,0.00009301788],"about_ca_topic_score_codex":0.0015035882,"about_ca_topic_score_gemma":0.00006472595,"teacher_disagreement_score":0.032883186,"about_ca_system_score_codex":0.00003935699,"about_ca_system_score_gemma":0.000034549106,"threshold_uncertainty_score":0.29347876},"labels":[],"label_agreement":null},{"id":"W4402139826","doi":"10.3390/v16091404","title":"mRNA Vaccination: An Outlook on Innate Sensing and Adaptive Immune Responses","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Vaccination; Immune system; Innate immune system; Immunology; Acquired immune system; Immunity; Biology; Pandemic; Virology; Medicine; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Disease","score_opus":0.08207611388011947,"score_gpt":0.36825482499722073,"score_spread":0.28617871111710125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402139826","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045038234,0.99433756,0.00001519823,0.000011245716,0.0003009146,0.00020841241,0.0001140019,0.000023768547,0.00048509391],"genre_scores_gemma":[0.001899428,0.9958864,0.00005532391,0.00021949474,0.000362565,0.000012147038,0.00011246175,0.000051169965,0.00140102],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987657,0.0001773191,0.00029057154,0.0005073309,0.00009182375,0.0001672747],"domain_scores_gemma":[0.99936706,0.000030475274,0.00011725382,0.00037006586,0.000059971982,0.000055170498],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015338666,0.00032515236,0.00048006154,0.00015529209,0.000065546476,0.00008742088,0.00014868822,0.0002853073,0.000016750266],"category_scores_gemma":[0.00005708969,0.00025180264,0.00015853129,0.00009052432,0.000035039757,0.0000064941214,0.00014538082,0.00019741012,0.00011049152],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110369336,0.000023870187,0.0000010683884,0.00079459534,0.00024805052,0.000040271316,0.00003453145,4.4735822e-7,0.002804265,0.000050134746,0.0015251545,0.99436724],"study_design_scores_gemma":[0.0000807189,0.00072514376,0.000008699446,0.0025336472,0.00032891345,0.000063745814,0.000031426138,0.0000061007195,0.005400484,0.000037373557,0.9904324,0.00035133777],"about_ca_topic_score_codex":0.00002916301,"about_ca_topic_score_gemma":0.00002281511,"teacher_disagreement_score":0.99401593,"about_ca_system_score_codex":0.00001932777,"about_ca_system_score_gemma":0.00013488247,"threshold_uncertainty_score":0.99999344},"labels":[],"label_agreement":null},{"id":"W4402209077","doi":"10.3390/v16091411","title":"Isolation and Characterization of a Frog Virus 3 Strain from a Wood Frog (Rana sylvatica) in Wood Buffalo National Park","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Athabasca University; Environment and Climate Change Canada; Laurentian University; Trent University","funders":"Natural Sciences and Engineering Research Council of Canada; Parks Canada","keywords":"Isolation (microbiology); Rana; Biology; Zoology; National park; Strain (injury); Virus; Anatomy; Ecology; Virology; Microbiology","score_opus":0.016338355799808656,"score_gpt":0.2474513078648272,"score_spread":0.23111295206501853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402209077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99230886,0.0037226588,0.00046121213,0.00016243239,0.00029678905,0.00025209875,0.0023026613,0.00006825359,0.0004250462],"genre_scores_gemma":[0.99699163,0.00020041483,0.00008621438,0.00028214,0.000048226048,0.000019712763,0.0021117197,0.00001421969,0.0002456928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991597,0.00008778912,0.0002829658,0.00027460945,0.00004462843,0.00015031658],"domain_scores_gemma":[0.9997043,0.00007658663,0.000073445626,0.00009428793,0.00003741555,0.000013980341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012286077,0.00014382078,0.0001921197,0.00018457398,0.000047112313,0.00003769107,0.000087830536,0.00014895255,0.0005899699],"category_scores_gemma":[0.00003995857,0.00013075916,0.000045625387,0.00019466905,0.000081378406,0.00023021676,0.00005027926,0.0001258872,0.00015128373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093514194,0.00010414053,0.0013349244,0.00004321523,0.00019099575,0.000003547146,0.0008899037,7.183228e-7,0.9905904,0.0031085087,0.0011759286,0.0024642216],"study_design_scores_gemma":[0.005456093,0.00030967538,0.37341323,0.0010531397,0.0005748829,0.000011540672,0.0014538611,0.0004559841,0.455051,0.0072775274,0.1537705,0.0011725469],"about_ca_topic_score_codex":0.00028158806,"about_ca_topic_score_gemma":0.00016787749,"teacher_disagreement_score":0.5355394,"about_ca_system_score_codex":0.00002701384,"about_ca_system_score_gemma":0.00004238851,"threshold_uncertainty_score":0.64597565},"labels":[],"label_agreement":null},{"id":"W4402378872","doi":"10.3390/v16091434","title":"Serologic Cross-Reactivity between the Mumps Virus Vaccine Genotype A Strain and the Circulating Genotype G Strain","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Genotype; Virology; Mumps virus; Biology; Titer; Serology; Antigen; Population; Mumps vaccine; Antibody; Immunology; Virus; Vaccination; Medicine; Rubella; Genetics; Measles; Gene","score_opus":0.04890739875806428,"score_gpt":0.34101409755093093,"score_spread":0.29210669879286666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402378872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876813,0.007632558,0.00010581683,0.0028828317,0.00015058118,0.0005209381,0.00034773097,0.00019990935,0.00047829346],"genre_scores_gemma":[0.99506056,0.00018532122,0.000034857814,0.0039232126,0.0005999607,0.000032875992,0.00003311413,0.00003155149,0.0000985261],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985048,0.00026306487,0.00028511658,0.00039419442,0.00020266192,0.00035015328],"domain_scores_gemma":[0.99854714,0.0008566031,0.00007072349,0.0003825767,0.000036831996,0.00010611561],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081424974,0.00023959366,0.00035781035,0.00006525408,0.00039658882,0.00012673721,0.0001671113,0.00017140609,0.00028705987],"category_scores_gemma":[0.0003949334,0.00012110581,0.00013339934,0.00023132621,0.00043146813,0.0001733436,0.00011239111,0.0005325188,0.00011683676],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003938075,0.00029937335,0.5531564,0.0006061134,0.001963592,0.0006544652,0.0028116587,0.0001181479,0.2640388,0.011837925,0.001258718,0.15931676],"study_design_scores_gemma":[0.0014627486,0.00022964882,0.9867905,0.00005144271,0.0005333837,0.000065622015,0.00008696555,0.00050967344,0.00090489176,0.005215722,0.0039887256,0.00016070268],"about_ca_topic_score_codex":0.000296016,"about_ca_topic_score_gemma":0.000096285,"teacher_disagreement_score":0.4336341,"about_ca_system_score_codex":0.00002695089,"about_ca_system_score_gemma":0.00010232007,"threshold_uncertainty_score":0.49385515},"labels":[],"label_agreement":null},{"id":"W4402394997","doi":"10.3390/v16091438","title":"Development and Validation of Serotype-Specific Blocking ELISA for the Detection of Anti-FMDV O/A/Asia1/SAT2 Antibodies","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Monoclonal antibody; Foot-and-mouth disease virus; Serotype; Virology; Polyclonal antibodies; Antibody; Biology; Virus; Immunology","score_opus":0.09382536028557717,"score_gpt":0.28593987483451805,"score_spread":0.19211451454894088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402394997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99662995,0.0026513494,0.0002012532,0.00016846143,0.000091795315,0.00015576638,0.000012198775,0.000025164003,0.00006408446],"genre_scores_gemma":[0.99911344,0.0005927583,0.00013368175,0.000045507903,0.000073883624,0.000011240336,0.0000072451244,6.449042e-7,0.00002159348],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99955696,0.0000224829,0.00016024525,0.0001204386,0.000057163485,0.00008271454],"domain_scores_gemma":[0.9996062,0.00028578105,0.000050373015,0.000021243579,0.00002434965,0.00001205351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022491302,0.000057808084,0.00009773427,0.0000133948115,0.000101575606,0.00002005846,0.000059585986,0.000027868507,0.000026575655],"category_scores_gemma":[0.000030793883,0.00001962905,0.000035855024,0.00010470369,0.00005085447,0.000065931374,0.00003717471,0.000021943628,0.0000030293495],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041635412,0.000018454853,0.02018723,0.00007693112,0.000050151655,3.009925e-7,0.00015198499,0.000010419581,0.8351041,0.0019845185,0.00026689869,0.14210734],"study_design_scores_gemma":[0.000056649755,0.00009583907,0.57255876,0.00006521583,0.000043112042,5.789803e-7,0.00064644427,0.00032058943,0.27618295,0.00042686937,0.1495051,0.000097916556],"about_ca_topic_score_codex":0.000036279882,"about_ca_topic_score_gemma":0.000047338624,"teacher_disagreement_score":0.55892116,"about_ca_system_score_codex":0.000004442353,"about_ca_system_score_gemma":0.0000024563128,"threshold_uncertainty_score":0.08004494},"labels":[],"label_agreement":null},{"id":"W4402526304","doi":"10.3390/v16091456","title":"Coxsackievirus B3 Activates Macrophages Independently of CAR-Mediated Viral Entry","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; St. Paul's Foundation","keywords":"Coxsackievirus; Enterovirus; Viral replication; Viral entry; Innate immune system; Virology; Biology; Viral pathogenesis; Macrophage; Virus; Immunology; Immune system; Enterovirus 71; Chemokine; In vitro; Genetics","score_opus":0.031003021712925172,"score_gpt":0.3458176288736102,"score_spread":0.31481460716068504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402526304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98451024,0.010884843,0.000015486818,0.00024391299,0.00037978907,0.000217105,0.000072994044,0.0001635749,0.0035120384],"genre_scores_gemma":[0.99567086,0.00204429,0.000030089332,0.00022976211,0.00012252184,0.00002254921,0.000023530098,0.000028686873,0.0018277133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896663,0.00006089299,0.00024359809,0.00023053776,0.00022953458,0.00026880644],"domain_scores_gemma":[0.999442,0.00012813904,0.000034477016,0.00023981994,0.000082949264,0.00007263334],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014332263,0.00013932755,0.00027222504,0.00030046792,0.00006507742,0.00003913646,0.00009320541,0.0001515477,0.0010554027],"category_scores_gemma":[0.00015629012,0.00010738239,0.0001086176,0.00037969288,0.00022383904,0.00020418849,0.00008195777,0.0004154702,0.0006243844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002612169,0.00020648152,0.021684997,0.00020396711,0.0004172998,0.00016385567,0.00015250545,0.0000013293976,0.9579872,0.00031435344,0.0027945207,0.01581231],"study_design_scores_gemma":[0.00094910583,0.00089175534,0.045999978,0.00029274396,0.000113719696,0.000093051945,0.00018975178,0.00012669415,0.8943888,0.000100663994,0.05668614,0.0001675937],"about_ca_topic_score_codex":0.0005402186,"about_ca_topic_score_gemma":0.000008852761,"teacher_disagreement_score":0.063598365,"about_ca_system_score_codex":0.00005523168,"about_ca_system_score_gemma":0.00015605292,"threshold_uncertainty_score":0.9998578},"labels":[],"label_agreement":null},{"id":"W4402748024","doi":"10.3390/v16091504","title":"Zooming in and out: Exploring RNA Viral Infections with Multiscale Microscopic Methods","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Chinese Academy of Medical Sciences; European Research Council; Wellcome Trust; Wellcome","keywords":"Microscopy; Cryo-electron microscopy; Cryo-electron tomography; RNA; Nanotechnology; Electron microscope; Electron tomography; Computational biology; Fluorescence microscope; Biology; Resolution (logic); Biophysics; Materials science; Tomography; Physics; Computer science; Optics; Fluorescence; Transmission electron microscopy; Scanning transmission electron microscopy; Genetics; Artificial intelligence","score_opus":0.30594501012282277,"score_gpt":0.5184785858067539,"score_spread":0.2125335756839311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402748024","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00295569,0.99527013,0.00016721996,0.000021635073,0.0003939031,0.00060721155,0.000012755064,0.000087064174,0.00048439635],"genre_scores_gemma":[0.000044821776,0.99566513,0.0027007957,0.000029053921,0.00012399482,0.00049172784,0.0000092504915,0.00006427211,0.00087096787],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99867153,0.00020030342,0.00035813608,0.0003914308,0.000080514095,0.00029807974],"domain_scores_gemma":[0.9994063,0.000171913,0.000058133453,0.0002677575,0.0000274957,0.00006844173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029913124,0.00028967415,0.0010502384,0.0007888838,0.00010765293,0.00006967258,0.00006111864,0.00020787757,0.000037896505],"category_scores_gemma":[0.00010684738,0.00019165492,0.00013206791,0.00047595473,0.00017405444,0.00017320397,0.00014280621,0.0010574386,0.00013270408],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011201144,0.00009774096,0.0005049543,0.007273143,0.00030577884,0.000061497194,0.00017504659,9.745091e-8,0.00066277833,0.00003463278,0.000067344,0.9908058],"study_design_scores_gemma":[0.0003473994,0.00041935244,0.00008702593,0.017018361,0.00064410386,0.00017471936,0.00006557609,0.000007011529,0.0001999836,0.000010782651,0.98082435,0.00020133569],"about_ca_topic_score_codex":0.00032103906,"about_ca_topic_score_gemma":0.00011148259,"teacher_disagreement_score":0.99060446,"about_ca_system_score_codex":0.00013461505,"about_ca_system_score_gemma":0.00017944069,"threshold_uncertainty_score":0.7815461},"labels":[],"label_agreement":null},{"id":"W4402751636","doi":"10.3390/v16091495","title":"Combining Short- and Long-Read Sequencing Technologies to Identify SARS-CoV-2 Variants in Wastewater","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Ottawa; Toronto Metropolitan University; Université Laval; Université de Montréal; Montreal Heart Institute; Polytechnique Montréal; McGill Genome Centre; Canada's Michael Smith Genome Sciences Centre; McGill University; University of British Columbia","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation; McGill University","keywords":"Biology; Genetics; DNA sequencing; Amplicon sequencing; Lineage (genetic); Population; Nanopore sequencing; Amplicon; Mutation rate; Deep sequencing; Computational biology; Evolutionary biology; Genome; Gene; Polymerase chain reaction; Medicine","score_opus":0.11469309254782205,"score_gpt":0.3781791607205546,"score_spread":0.2634860681727325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402751636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963406,0.0011262598,0.00015779518,0.0002912812,0.00035088565,0.00023543107,0.0000035210458,0.0008813909,0.00061283505],"genre_scores_gemma":[0.9971628,0.000013885371,0.0005633508,0.0021249857,0.000048872575,0.000026527596,9.1070984e-7,0.00003377065,0.000024864388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889684,0.000023381057,0.0002721519,0.00036847315,0.00015983035,0.00027932832],"domain_scores_gemma":[0.99959844,0.000118099626,0.000019098534,0.00021287505,0.000028079281,0.00002337626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025230757,0.0001630858,0.00024460064,0.00053835567,0.000058819573,0.00013400453,0.00007738957,0.00011890464,0.000009683467],"category_scores_gemma":[0.00041452624,0.00013879522,0.000033953424,0.00054999965,0.00005976635,0.00020740372,0.00012573878,0.0002875203,0.00011033047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023715314,0.000015544381,0.015222859,0.000109905115,0.000030124664,0.0006302277,0.00044429925,0.0000011743152,0.97224075,0.00009023562,0.000119958946,0.011071196],"study_design_scores_gemma":[0.0002638951,0.00011787893,0.0037175915,0.0010592432,0.000035620014,0.00036490182,0.0004954125,0.000636776,0.99069566,0.00033128957,0.002116488,0.00016525693],"about_ca_topic_score_codex":0.00021937524,"about_ca_topic_score_gemma":0.00016067001,"teacher_disagreement_score":0.018454887,"about_ca_system_score_codex":0.00010233064,"about_ca_system_score_gemma":0.00004853048,"threshold_uncertainty_score":0.56599045},"labels":[],"label_agreement":null},{"id":"W4402765463","doi":"10.3390/v16091506","title":"Putting a Kink in HIV-1 Particle Infectivity: Rocaglamide Inhibits HIV-1 Replication by Altering Gag-Genomic RNA Interaction","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"RNA; Cell biology; Guide RNA; Viral replication; Biology; Virology; Capsid; Polyproteins; Group-specific antigen; Ribonucleoprotein; Chemistry; Virus; Genetics; Genome; Gene","score_opus":0.02939670754237052,"score_gpt":0.3089680910936937,"score_spread":0.2795713835513232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402765463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951723,0.0026851527,0.00051916763,0.00048577276,0.0001914801,0.00023085502,0.00008048557,0.00016638034,0.00046840718],"genre_scores_gemma":[0.99886054,0.00017207571,0.00003336499,0.00009529158,0.00003476028,0.00011723154,0.0001556802,0.00002034513,0.0005107122],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988471,0.00015756486,0.00023023949,0.00039869975,0.000032366384,0.00033397638],"domain_scores_gemma":[0.99946666,0.0001949382,0.000041048654,0.00025446946,0.000015782807,0.000027125327],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002697287,0.00012903963,0.00014487366,0.00013522795,0.00009817109,0.000068476795,0.00007622672,0.000084911124,0.00018348328],"category_scores_gemma":[0.00012418507,0.00011851797,0.0000448798,0.00019675409,0.000048561353,0.00031996024,0.00008543045,0.0002672084,0.004889851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046661295,0.00011688279,0.026214585,0.000025334413,0.00007082653,0.000015599422,0.0003519865,0.000018015558,0.9046057,0.000113006216,0.003801975,0.06461946],"study_design_scores_gemma":[0.00053636025,0.00009093492,0.008825219,0.00014421987,0.000014159146,0.00003454147,0.00006137111,0.00014857635,0.928229,0.0000679823,0.061735213,0.000112427384],"about_ca_topic_score_codex":0.0004265407,"about_ca_topic_score_gemma":0.00010804851,"teacher_disagreement_score":0.06450703,"about_ca_system_score_codex":0.00020611173,"about_ca_system_score_gemma":0.000045503697,"threshold_uncertainty_score":0.99588495},"labels":[],"label_agreement":null},{"id":"W4402809027","doi":"10.3390/v16091466","title":"Complete Genome Sequencing and Comparative Phylogenomics of Nine African Swine Fever Virus (ASFV) Isolates of the Virulent East African p72 Genotype IX without Viral Sequence Enrichment","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Defense Threat Reduction Agency","keywords":"Biology; African swine fever virus; Genome; Genotype; Virology; Genetics; Virus; Gene","score_opus":0.12096512549931629,"score_gpt":0.2820183077016527,"score_spread":0.16105318220233641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402809027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546707,0.002073786,0.000015854403,0.00035619386,0.00009249258,0.0003220125,0.0005565383,0.000042775202,0.001073295],"genre_scores_gemma":[0.99896723,0.0002593871,0.00012437343,0.00038923044,0.00012117429,0.00001456148,0.000024069855,0.0000025557495,0.00009742367],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99855554,0.00017330628,0.00042367476,0.00038323307,0.00016117058,0.0003030724],"domain_scores_gemma":[0.99936295,0.00018693459,0.00020209709,0.000106113774,0.000055177366,0.00008675508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026459916,0.00022949468,0.0004347914,0.000035243953,0.00015109166,0.000034781515,0.00033845936,0.000056242567,0.00018802784],"category_scores_gemma":[0.000023895562,0.00008958853,0.00012391813,0.00037399484,0.00041222826,0.000116883246,0.000309944,0.00012359026,0.000019818553],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010639309,0.000044236214,0.011452121,0.000044564866,0.00011969947,0.0000027512997,0.0008522445,0.00011580829,0.98369306,0.0027314106,0.00008830142,0.00074942043],"study_design_scores_gemma":[0.00048083722,0.0016241516,0.8956312,0.00023834908,0.00048343177,0.000015029437,0.0060386905,0.0061356723,0.018885082,0.0028180217,0.06660189,0.0010476821],"about_ca_topic_score_codex":0.0021592574,"about_ca_topic_score_gemma":0.00066031807,"teacher_disagreement_score":0.964808,"about_ca_system_score_codex":0.00006907529,"about_ca_system_score_gemma":0.000022580278,"threshold_uncertainty_score":0.36533144},"labels":[],"label_agreement":null},{"id":"W4403194767","doi":"10.3390/v16101569","title":"Cognitive Assessment in HTLV-1 Patients Followed Up at a Reference Center in Salvador, Brazil","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Center (category theory); Assessment center; Cognitive Assessment System; Cognition; Medicine; Internal medicine; Psychology; Cognitive impairment; Applied psychology; Chemistry; Psychiatry","score_opus":0.027934656869592497,"score_gpt":0.3128115856390551,"score_spread":0.2848769287694626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403194767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98766196,0.00405519,0.0000035936484,0.00008621529,0.0014548894,0.00023972933,0.00020552393,0.00006805677,0.0062248344],"genre_scores_gemma":[0.9955014,0.00050582393,0.0000066269326,0.0005157504,0.0000142516365,0.000057785026,0.000112436916,0.000016121288,0.0032698242],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99882245,0.00014433134,0.0002753192,0.0003612594,0.00004419824,0.00035243848],"domain_scores_gemma":[0.9996069,0.00020259329,0.000039084327,0.000106630505,0.000030633237,0.000014132462],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010441293,0.00018249577,0.00025969895,0.00020195341,0.00008687788,0.000018223463,0.00010879858,0.0001644217,0.0004543171],"category_scores_gemma":[0.000046540998,0.00014033487,0.000057455414,0.0001991667,0.00013458081,0.00010250775,0.00021387826,0.00036583087,0.0013063373],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034272939,0.0005007846,0.91345197,0.00006266411,0.0002047176,0.000044326305,0.0016777418,4.0123768e-7,0.067867026,0.000395519,0.008512021,0.0069401027],"study_design_scores_gemma":[0.00549455,0.00042087358,0.816497,0.0007593183,0.00005222923,0.000006897487,0.0008153554,0.0000026375862,0.026889503,0.00015760683,0.1484231,0.00048090692],"about_ca_topic_score_codex":0.000541556,"about_ca_topic_score_gemma":0.0022306414,"teacher_disagreement_score":0.13991109,"about_ca_system_score_codex":0.00014294275,"about_ca_system_score_gemma":0.000051332016,"threshold_uncertainty_score":0.99947125},"labels":[],"label_agreement":null},{"id":"W4403392347","doi":"10.3390/v16101609","title":"Double-Negative T-Cells during Acute Human Immunodeficiency Virus and Simian Immunodeficiency Virus Infections and Following Early Antiretroviral Therapy Initiation","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University Health Centre; Université Laval; Université du Québec à Montréal","funders":"McGill University Health Centre; Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research; Université Laval; Gilead Sciences","keywords":"Virology; Simian immunodeficiency virus; Immunodeficiency; Virus; Human immunodeficiency virus (HIV); Antiretroviral therapy; Immunology; Lentivirus; Biology; Medicine; Viral disease; Immune system; Viral load","score_opus":0.02556613864486245,"score_gpt":0.30500215700182753,"score_spread":0.2794360183569651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403392347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9767231,0.020907564,0.000025530642,0.000029752846,0.00043177404,0.00043455244,0.00022755277,0.00020470661,0.0010155203],"genre_scores_gemma":[0.99590325,0.0033517433,0.00001654671,0.00004296616,0.000023376877,0.000075329845,0.00005472361,0.00003441918,0.0004976276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99841076,0.00015399368,0.00031062553,0.0005059259,0.00008906561,0.00052961666],"domain_scores_gemma":[0.99945325,0.00015817108,0.00006249752,0.00024629777,0.000037760106,0.000042021467],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019440886,0.00029676812,0.000289892,0.0003745588,0.0011772807,0.00025834265,0.00013528322,0.00018204305,0.00017138905],"category_scores_gemma":[0.000016468332,0.00024786184,0.000120367564,0.00034978872,0.00040563018,0.00064605946,0.00012887498,0.0004010574,0.00044838182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001685799,0.00021969213,0.005885305,0.000020495907,0.0005536909,0.00006835299,0.00258722,0.0000014476874,0.987683,0.00049080513,0.000033596396,0.0022877972],"study_design_scores_gemma":[0.004330754,0.0018097806,0.048655886,0.00012059635,0.0001495352,0.00007930508,0.00036063322,0.0000052373503,0.9418743,0.00024787878,0.0019203566,0.00044568215],"about_ca_topic_score_codex":0.0030454018,"about_ca_topic_score_gemma":0.00009606695,"teacher_disagreement_score":0.04580866,"about_ca_system_score_codex":0.00008312763,"about_ca_system_score_gemma":0.00007411383,"threshold_uncertainty_score":0.9999974},"labels":[],"label_agreement":null},{"id":"W4403406456","doi":"10.3390/v16101614","title":"Viral Diversity in Mixed Tree Fruit Production Systems Determined through Bee-Mediated Pollen Collection","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; Vineland Research and Innovation Centre; Brock University; Canadian Food Inspection Agency; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Government of Canada; Canadian Food Inspection Agency","keywords":"Pollen; Biology; Diversity (politics); Tree (set theory); Botany; Pollinator; Pollination; Mathematics","score_opus":0.09509025343826816,"score_gpt":0.24232761711972917,"score_spread":0.147237363681461,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403406456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705404,0.0011663826,3.8897684e-7,0.0003884651,0.00044235782,0.00017581643,0.00006451566,0.0001571554,0.00055090047],"genre_scores_gemma":[0.99867046,0.0003232387,0.0000042322113,0.000045617726,0.00034163537,0.000013822448,0.000013333548,6.32177e-7,0.0005870196],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993033,0.0000490255,0.00012195905,0.00023302973,0.00012722836,0.00016545733],"domain_scores_gemma":[0.99982446,0.00010064969,0.000026130096,0.0000108434615,0.00001653412,0.00002136917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000969345,0.000097413715,0.0001330029,0.00001864027,0.00028637314,0.000062558116,0.000083692874,0.000057695128,0.000025309282],"category_scores_gemma":[0.000047046455,0.000038506063,0.000040434403,0.00040668237,0.00003151451,0.00023267143,0.000074897405,0.00006936889,0.00006675038],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012628628,0.00007737473,0.07270144,0.000031496627,0.00003726772,0.00003422963,0.00050716806,0.000003671913,0.91011184,0.00011040822,0.010496499,0.005762305],"study_design_scores_gemma":[0.00016326507,0.00033307355,0.94172037,0.00013203028,0.000027669455,0.000012695197,0.0008768075,0.00019889887,0.013080064,0.00024225451,0.042932123,0.0002807488],"about_ca_topic_score_codex":0.0040928195,"about_ca_topic_score_gemma":0.016831812,"teacher_disagreement_score":0.8970318,"about_ca_system_score_codex":0.000046468354,"about_ca_system_score_gemma":0.0000043951754,"threshold_uncertainty_score":0.9392546},"labels":[],"label_agreement":null},{"id":"W4403406474","doi":"10.3390/v16101615","title":"Host Response Markers of Inflammation and Endothelial Activation Associated with COVID-19 Severity and Mortality: A GeoSentinel Prospective Observational Cohort","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; Toronto General Hospital; University of Toronto","funders":"Instituut voor Tropische Geneeskunde; Public Health Agency of Canada; Centers for Disease Control and Prevention; International Society of Travel Medicine","keywords":"Inflammation; Observational study; Medicine; Coronavirus disease 2019 (COVID-19); Endothelial activation; Prospective cohort study; 2019-20 coronavirus outbreak; Cohort study; Internal medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Immunology; Virology; Disease; Outbreak; Infectious disease (medical specialty)","score_opus":0.08816126581992884,"score_gpt":0.4139407810773218,"score_spread":0.32577951525739296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403406474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948687,0.000054997017,0.00023339552,0.003794167,0.000020451935,0.000740552,0.00016232004,0.00007683706,0.000048573933],"genre_scores_gemma":[0.99868286,0.00016366762,0.00007532773,0.0007182259,0.000056027468,0.00007203679,0.000023114657,0.000012646272,0.00019607214],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986666,0.00016511517,0.00025745612,0.00029060963,0.00048560157,0.00013463813],"domain_scores_gemma":[0.9925235,0.006952395,0.000092238835,0.00010223558,0.0002074399,0.0001221951],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0013698812,0.00011275842,0.00025224482,0.00012905413,0.00008849398,0.000034835608,0.000028492062,0.0000658881,0.000030529278],"category_scores_gemma":[0.050036654,0.000087281434,0.000030244344,0.00030736663,0.00032570097,0.00021499897,0.000069904134,0.00016487126,0.0000012361202],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00536836,0.000060838047,0.945587,0.00046604028,0.0005900615,0.000023726434,0.00038741037,0.0000055836335,0.046778787,0.0002790134,0.00013618478,0.00031699662],"study_design_scores_gemma":[0.001099111,0.00033094545,0.9916343,0.00025167948,0.00013938319,0.0000013951329,0.000072775605,0.0009526103,0.0036564495,0.00038025228,0.00139752,0.00008354593],"about_ca_topic_score_codex":0.0004686431,"about_ca_topic_score_gemma":0.000079504316,"teacher_disagreement_score":0.04866677,"about_ca_system_score_codex":0.00022092396,"about_ca_system_score_gemma":0.0007019346,"threshold_uncertainty_score":0.9579653},"labels":[],"label_agreement":null},{"id":"W4403495853","doi":"10.3390/v16101623","title":"Activation-Induced Marker Assay to Identify and Isolate HCV-Specific T Cells for Single-Cell RNA-Seq Analysis","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"RNA-Seq; Cell; Virology; RNA; Biology; Molecular biology; Computational biology; Gene expression; Transcriptome; Genetics; Gene","score_opus":0.03980714863649946,"score_gpt":0.2915657098362691,"score_spread":0.25175856119976964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403495853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9631594,0.00083327864,0.034135167,0.00013647012,0.00045511336,0.00026217938,0.00008471533,0.00003811567,0.0008956037],"genre_scores_gemma":[0.9969946,0.0001559905,0.0011355304,0.0005618302,0.00025887808,0.000029373265,0.000058045207,0.00004077799,0.0007649507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989211,0.0000422977,0.00021848189,0.00048689469,0.00010448708,0.000226737],"domain_scores_gemma":[0.99947786,0.00006958815,0.000037410333,0.0002515038,0.00006495264,0.00009870867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019339754,0.0001828719,0.00018361359,0.00016647589,0.00009053559,0.00020580713,0.00012615645,0.00015209135,0.00004260592],"category_scores_gemma":[0.000025597541,0.00017253292,0.0001653925,0.0003074618,0.000025779245,0.000012613273,0.00004382462,0.00007244904,0.000022191987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010826674,0.000062013205,0.00031983384,0.000043384196,0.00023401306,0.0000018863232,0.00007494726,0.00004905766,0.99272037,0.0000217625,0.002190363,0.004174085],"study_design_scores_gemma":[0.00020755762,0.00015102087,0.0003601361,0.000016860937,0.00014314517,6.509012e-7,0.000030012268,0.0002752612,0.88755184,0.000034216537,0.11101337,0.00021592238],"about_ca_topic_score_codex":0.000049871524,"about_ca_topic_score_gemma":0.00003631577,"teacher_disagreement_score":0.10882301,"about_ca_system_score_codex":0.000018920497,"about_ca_system_score_gemma":0.000029842622,"threshold_uncertainty_score":0.7035688},"labels":[],"label_agreement":null},{"id":"W4403612250","doi":"10.3390/v16101635","title":"Rabies in Cats—An Emerging Public Health Issue","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"World Health Organization","keywords":"Rabies; Rabies virus; Lyssavirus; CATS; Virology; Vaccination; Biology; Rabies vaccine; Post-exposure prophylaxis; Veterinary medicine; One Health; Public health; Medicine; Rhabdoviridae; Pathology","score_opus":0.21439492755996453,"score_gpt":0.44076160426807365,"score_spread":0.22636667670810912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403612250","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000020260191,0.9946971,0.000008564199,0.001336747,0.0025236728,0.0005390549,0.00012690052,0.00022518956,0.00052250683],"genre_scores_gemma":[0.00007019428,0.99395764,0.000013206946,0.0022414622,0.00022866472,0.00026829803,0.00036619816,0.00006792189,0.0027864412],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949365,0.002304693,0.0011238572,0.0007357121,0.000028101325,0.00087113626],"domain_scores_gemma":[0.9984538,0.00051020563,0.000352124,0.00060396036,0.000022574628,0.000057332603],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015904346,0.0005473712,0.0026328685,0.00063757185,0.00018436066,0.000035755947,0.0005743874,0.0009370172,0.0009010763],"category_scores_gemma":[0.00034823414,0.00040296785,0.0003626742,0.00040102593,0.00026202024,0.00018051369,0.00015401564,0.0013834791,0.0072834888],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000067966384,0.00007526814,0.000027468357,0.003721582,0.00045211634,0.000016835218,0.00032413003,2.928606e-7,0.0000068583267,0.0032436724,0.032711092,0.9594139],"study_design_scores_gemma":[0.00017684921,0.00010365386,0.0000066196594,0.002671809,0.0001974274,0.000080002545,0.00012938121,4.202146e-7,0.0000014805938,0.00015601119,0.996137,0.00033931347],"about_ca_topic_score_codex":0.0007219111,"about_ca_topic_score_gemma":0.00048828736,"teacher_disagreement_score":0.96342593,"about_ca_system_score_codex":0.00015674486,"about_ca_system_score_gemma":0.00070369354,"threshold_uncertainty_score":0.9998422},"labels":[],"label_agreement":null},{"id":"W4403647085","doi":"10.3390/v16111649","title":"Transactivation of Human Endogenous Retroviruses by Viruses","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; University of British Columbia","keywords":"Transactivation; Biology; Epigenetics; Endogenous retrovirus; Endogeny; Virology; RNA; Genome; Genetics; Computational biology; Gene; Gene expression","score_opus":0.1469020373488154,"score_gpt":0.32398754769036053,"score_spread":0.17708551034154513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403647085","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021899182,0.994162,8.795634e-7,0.000015803183,0.00018890698,0.00041117624,0.0023073624,0.000119341224,0.0006045651],"genre_scores_gemma":[0.0027400176,0.996281,0.000011776868,0.00009378412,0.00032722976,0.0000762641,0.00029890245,0.000006086807,0.00016490172],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983112,0.00012033264,0.000634989,0.00043479225,0.0002603124,0.00023836626],"domain_scores_gemma":[0.99924886,0.00025002344,0.0002784989,0.00010821251,0.000041389943,0.000073040246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010537473,0.00036628838,0.0009024709,0.000041203242,0.00016411595,0.00007315216,0.00036769835,0.00028592482,0.0008430316],"category_scores_gemma":[0.000027835113,0.00013077568,0.00046764567,0.00059589196,0.0000750446,0.000091328984,0.000050988718,0.00021345407,0.00018775374],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000034334912,0.00019162582,0.000015791857,0.0021664698,0.00021156434,0.000004848702,0.00006158787,1.090055e-7,0.11631104,0.00039118846,0.0020921235,0.87855023],"study_design_scores_gemma":[0.000032570704,0.00022378538,0.000009674976,0.0016335316,0.00066818943,0.000010769596,0.000018393157,1.174621e-7,0.0036447712,0.00021778692,0.9932494,0.00029097858],"about_ca_topic_score_codex":0.00067874143,"about_ca_topic_score_gemma":0.00022741436,"teacher_disagreement_score":0.9911573,"about_ca_system_score_codex":0.000040704203,"about_ca_system_score_gemma":0.00003705952,"threshold_uncertainty_score":0.92306054},"labels":[],"label_agreement":null},{"id":"W4403653717","doi":"10.3390/v16111648","title":"SARS-CoV-2 Assembly: Gaining Infectivity and Beyond","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Viral entry; Virology; Biology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Viral replication; Virus; Pandemic; Coronavirus; Viral structural protein; Coronavirus disease 2019 (COVID-19); Infectivity; Immune system; Viral protein; Viral pathogenesis; Immunology; Infectious disease (medical specialty); Medicine","score_opus":0.18172309577971685,"score_gpt":0.46370410992290656,"score_spread":0.2819810141431897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403653717","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0044511217,0.9831619,0.000011120725,0.000024925685,0.00035745505,0.00080575334,0.000050713727,0.00024798166,0.010889002],"genre_scores_gemma":[0.00020528033,0.97476035,0.000043088112,0.023920216,0.0006880645,0.00017821131,0.0000075356675,0.00015926536,0.00003797319],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975509,0.00018104316,0.0004781486,0.00077553745,0.0004988836,0.00051550317],"domain_scores_gemma":[0.9986234,0.0005400346,0.0001270008,0.0005854252,0.00007207558,0.00005208665],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006333309,0.0005613142,0.0018697849,0.0006524183,0.0000984015,0.0001895935,0.00018963727,0.00046967322,0.000006109967],"category_scores_gemma":[0.0005162398,0.00040529118,0.0004318061,0.00073910545,0.00016162885,0.00014945594,0.0003761463,0.001141412,0.0009027617],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002505348,0.000112212445,0.0004890373,0.035008036,0.0006036049,0.000563993,0.000088073546,1.3369338e-9,0.0024289137,0.00032814394,0.005594005,0.95475894],"study_design_scores_gemma":[0.00026501535,0.00018402623,0.000010153323,0.009678712,0.0014974645,0.0002438028,0.000010432982,0.000005615847,0.0035097876,0.000117906646,0.984116,0.00036108037],"about_ca_topic_score_codex":0.00021157341,"about_ca_topic_score_gemma":0.00004812065,"teacher_disagreement_score":0.978522,"about_ca_system_score_codex":0.00019609297,"about_ca_system_score_gemma":0.0009580396,"threshold_uncertainty_score":0.9998751},"labels":[],"label_agreement":null},{"id":"W4403689693","doi":"10.3390/v16111653","title":"Analysis of Powassan Virus Genome Sequences from Human Cases Reveals Substantial Genetic Diversity with Implications for Molecular Assay Development","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; National Center for Advancing Translational Sciences; University of Minnesota","keywords":"Biology; Lineage (genetic); Genome; Clade; Virology; Whole genome sequencing; Genetics; Tick; Evolutionary biology; Phylogenetics; Gene","score_opus":0.07004680851789503,"score_gpt":0.3375624902435723,"score_spread":0.2675156817256773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403689693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98938996,0.00091735495,0.008717669,0.000054062803,0.000033654374,0.0002570237,0.00049279735,0.00006354054,0.00007396882],"genre_scores_gemma":[0.99750304,0.000031800897,0.002102535,0.00010580518,0.000035824964,0.000027141656,0.00014612006,0.000013294398,0.000034462857],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992117,0.000028279448,0.00023225918,0.0002616949,0.00012967455,0.00013633614],"domain_scores_gemma":[0.99946654,0.00009727189,0.000064619635,0.00020587571,0.000096340766,0.000069349524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000100311576,0.00011640707,0.00027915902,0.00033562907,0.00022303396,0.0000285576,0.00007366414,0.000048057616,0.00015301569],"category_scores_gemma":[0.000022725842,0.00009067107,0.00012791857,0.0007027079,0.00007488887,0.0000624562,0.000046451314,0.000053304397,0.0000047444005],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038986986,0.00009758994,0.38064423,0.00004877856,0.0028319757,0.000040979583,0.0003846618,0.00016668673,0.6146019,0.0003796166,0.000060473478,0.0007041175],"study_design_scores_gemma":[0.00022534895,0.00027653703,0.94870836,0.00005325749,0.0032143942,0.000008825973,0.00006990366,0.000057343845,0.044872593,0.0001793051,0.0021634195,0.00017072205],"about_ca_topic_score_codex":0.0022592046,"about_ca_topic_score_gemma":0.0017580544,"teacher_disagreement_score":0.5697293,"about_ca_system_score_codex":0.00007612958,"about_ca_system_score_gemma":0.000094656905,"threshold_uncertainty_score":0.3697459},"labels":[],"label_agreement":null},{"id":"W4403877627","doi":"10.3390/v16111684","title":"Emergence of a New Pathogen: A Retrospective Study of HPeV-5 Central Nervous System Disease in Alberta, Canada","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; Stollery Children's Hospital; Alberta Children's Hospital; McGill University; University of Calgary; University of Alberta","funders":"University of Calgary","keywords":"Medicine; Epidemiology; Pediatrics; Encephalitis; Biology; Internal medicine; Virology; Virus","score_opus":0.025776298735801045,"score_gpt":0.3065799668224483,"score_spread":0.28080366808664725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403877627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99671006,0.0020611614,0.0000057959433,0.00011150688,0.00026802756,0.00041225404,0.000040701205,0.000015127934,0.00037539128],"genre_scores_gemma":[0.9993506,0.000061663726,0.0000049982054,0.0000184466,0.000041480333,0.00001955289,0.0000026051962,0.00001096515,0.00048968213],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991038,0.000056710232,0.00026212452,0.00018280663,0.0002010999,0.00019345168],"domain_scores_gemma":[0.9995558,0.00003123933,0.000033181528,0.0002171122,0.00005765268,0.00010496001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000068859015,0.000083995656,0.00024810765,0.0001399913,0.000023267663,0.0000049656,0.00006402232,0.000028373124,0.0001464854],"category_scores_gemma":[0.00011163038,0.00006737086,0.000042464777,0.00050954457,0.000036639194,0.000055005745,0.000038956157,0.00014981268,0.0000049103733],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032281893,0.00046993967,0.98359615,0.00036661047,0.00020325425,0.0003579004,0.0012219481,0.000042358177,0.009122989,0.00048026672,0.00258565,0.0012300928],"study_design_scores_gemma":[0.0006018522,0.00086990284,0.99228215,0.00037621672,0.00009151492,0.000008666074,0.0031687045,0.0005016679,0.0012397798,0.000012186813,0.0007715181,0.00007581069],"about_ca_topic_score_codex":0.92393124,"about_ca_topic_score_gemma":0.7196863,"teacher_disagreement_score":0.20424491,"about_ca_system_score_codex":0.00012693083,"about_ca_system_score_gemma":0.0010926748,"threshold_uncertainty_score":0.28542867},"labels":[],"label_agreement":null},{"id":"W4403921514","doi":"10.3390/v16111694","title":"Bone Mineral Density, Bone Biomarkers, and Joints in Acute, Post, and Long COVID-19: A Systematic Review","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"Bone and Joint Diseases","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Qassim University","keywords":"Coronavirus disease 2019 (COVID-19); Bone mineral; Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Osteoporosis; Internal medicine; Pathology; Disease","score_opus":0.06133999076832751,"score_gpt":0.37297426398021716,"score_spread":0.31163427321188963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403921514","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030332914,0.99503464,0.0000012056792,0.0005545623,0.00010322704,0.003594427,0.0002556763,0.000103685656,0.00004925673],"genre_scores_gemma":[0.000024846491,0.991392,0.000057258723,0.007519335,0.00008201807,0.00024295814,0.00015399644,0.000080288686,0.00044727305],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99708915,0.00030814888,0.0012751999,0.0006706755,0.00032659367,0.00033021029],"domain_scores_gemma":[0.9981726,0.00032140999,0.0003420648,0.000530302,0.000056280678,0.0005773392],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00063548144,0.00061098195,0.0047544707,0.00060489733,0.000051859646,0.00008748117,0.000076426666,0.0002505974,0.0000573392],"category_scores_gemma":[0.0016513955,0.00040599826,0.00041714552,0.00056769856,0.00015043683,0.00011794604,0.00025834687,0.00034265977,0.00011994613],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027558393,0.00007357871,0.00007502346,0.97080684,0.0008202073,0.0057656607,0.000025260037,5.114565e-10,0.0000047814083,0.000018130679,0.014979188,0.0074037584],"study_design_scores_gemma":[0.00047801118,0.00011547912,0.000052948846,0.8739857,0.030709188,0.007991834,0.000017836848,8.8248663e-7,3.9887692e-7,0.00002221704,0.086201444,0.0004240523],"about_ca_topic_score_codex":0.00018786122,"about_ca_topic_score_gemma":0.00012700795,"teacher_disagreement_score":0.096821144,"about_ca_system_score_codex":0.00014022115,"about_ca_system_score_gemma":0.0005916463,"threshold_uncertainty_score":0.9998392},"labels":[],"label_agreement":null},{"id":"W4404378464","doi":"10.3390/v16111776","title":"Computational Evidence for Bisartan Arginine Blockers as Next-Generation Pan-Antiviral Therapeutics Targeting SARS-CoV-2, Influenza, and Respiratory Syncytial Viruses","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Victoria University; RMIT University; National Research Foundation","keywords":"Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Medicine; Antiviral therapy; Betacoronavirus; Respiratory system; Sars virus; Biology; Virus; Infectious disease (medical specialty); Internal medicine; Disease","score_opus":0.390456544763007,"score_gpt":0.4870685444146257,"score_spread":0.09661199965161871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404378464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98515546,0.0113861775,0.0013534247,0.00037283762,0.00039563957,0.0009224116,0.00004389314,0.00026497233,0.00010515444],"genre_scores_gemma":[0.98269933,0.00013388813,0.0016049603,0.014152336,0.0011209795,0.0001569345,0.000014392303,0.0000792398,0.000037915386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99775887,0.00017690742,0.00056823296,0.0005783134,0.0005242652,0.00039342328],"domain_scores_gemma":[0.9984876,0.00080711866,0.000089199944,0.00024594928,0.00028584187,0.000084292915],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007372131,0.00028575986,0.00032738908,0.00046783476,0.00033610058,0.0004370192,0.000112136164,0.00016704135,0.00003669592],"category_scores_gemma":[0.0008098178,0.0002521777,0.00012364428,0.00052134786,0.00029204827,0.0009619626,0.00007272733,0.00035542322,0.00014970571],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003830705,0.00008278728,0.015765877,0.000231456,0.00022302274,0.000038164166,0.00022126618,0.00009130166,0.9658367,0.0010281672,0.005288796,0.010809372],"study_design_scores_gemma":[0.0011759707,0.0015074348,0.0018117233,0.0004864179,0.00022839842,0.000029491015,0.00011153208,0.020716498,0.6973512,0.00040109822,0.27577558,0.00040462663],"about_ca_topic_score_codex":0.00012607484,"about_ca_topic_score_gemma":0.000034174987,"teacher_disagreement_score":0.27048677,"about_ca_system_score_codex":0.0001486172,"about_ca_system_score_gemma":0.0005703799,"threshold_uncertainty_score":0.999993},"labels":[{"model":"gpt","categories":[],"domain":null,"study_design":"simulation_or_modeling","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"grok","categories":[],"domain":null,"study_design":"simulation_or_modeling","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"opus","categories":[],"domain":null,"study_design":"simulation_or_modeling","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W4404504381","doi":"10.3390/v16111794","title":"Rapid Development of Small Rodent Animal Models for Infectious Disease Research Through Vectorized Receptor Molecule Expression","year":2024,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Guelph","funders":"","keywords":"Rodent; Biology; Infectious disease (medical specialty); Computational biology; Virology; Disease; Medicine; Ecology; Internal medicine","score_opus":0.1988630116264792,"score_gpt":0.4317647100139565,"score_spread":0.2329016983874773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404504381","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0042962176,0.9918429,0.0008530592,0.000010790038,0.00025596493,0.0021834755,0.00040417578,0.000041786385,0.000111605565],"genre_scores_gemma":[0.0003247223,0.99404556,0.0019318783,0.000033367593,0.0005163502,0.0019487333,0.0006616869,0.00020990154,0.0003278172],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963692,0.0005704915,0.0007717331,0.0010414772,0.00057877164,0.000668319],"domain_scores_gemma":[0.9982443,0.000116765426,0.00019810084,0.00085980596,0.00035826713,0.00022277402],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010131394,0.0005262822,0.0009249794,0.00029018702,0.00020536034,0.00007596589,0.00068227376,0.00043298243,0.000054956818],"category_scores_gemma":[0.00021744485,0.00042213852,0.0005472808,0.00040285155,0.00017121068,0.000010053913,0.0006254699,0.00042455303,0.00006868433],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007111365,0.00087324466,0.0000019810234,0.037694726,0.0014999759,0.000017084765,0.0003158405,0.000046741632,0.46116754,0.00018189619,0.014880047,0.47620955],"study_design_scores_gemma":[0.00040273808,0.0013424626,1.1048119e-7,0.0030011192,0.00014955144,0.0000014075313,0.000009714434,0.000014857452,0.18182467,0.00011040008,0.81275636,0.00038661502],"about_ca_topic_score_codex":0.000013349601,"about_ca_topic_score_gemma":0.000029579858,"teacher_disagreement_score":0.7978763,"about_ca_system_score_codex":0.00015643465,"about_ca_system_score_gemma":0.0022209212,"threshold_uncertainty_score":0.99982303},"labels":[],"label_agreement":null},{"id":"W4404829280","doi":"10.3390/v16121844","title":"miR-24-3p Is Antiviral Against SARS-CoV-2 by Downregulating Critical Host Entry Factors","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Viral entry; Furin; Biology; Coronavirus; Mechanism (biology); Effector; microRNA; Viral replication; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virus; Computational biology; Virology; Coronavirus disease 2019 (COVID-19); Gene; Immunology; Medicine; Genetics; Disease","score_opus":0.07577240400773386,"score_gpt":0.39406099870982947,"score_spread":0.3182885947020956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404829280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867699,0.0031847828,0.00007842485,0.000841705,0.0005545179,0.00027483294,0.00018953669,0.00037811935,0.007728151],"genre_scores_gemma":[0.9255748,0.0000189612,0.0000927019,0.07371315,0.0003974295,0.000019228557,0.000011285923,0.00007423255,0.00009825549],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975118,0.000076505705,0.00037476257,0.0006178928,0.0007098007,0.0007092412],"domain_scores_gemma":[0.9988457,0.00055624807,0.000028111575,0.00041582788,0.00008966936,0.000064464584],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021853203,0.00032379097,0.00040518134,0.00026292223,0.00015979841,0.00025366942,0.00020755517,0.0002214287,0.00005647045],"category_scores_gemma":[0.00057434273,0.00026197676,0.00022072461,0.000507615,0.00031638602,0.00033618332,0.0001456301,0.0005630399,0.0007381128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081029895,0.00015132365,0.03384791,0.00031617732,0.00010187331,0.00026334458,0.00053504726,1.1354211e-8,0.90651387,0.00026260738,0.055212393,0.0027144107],"study_design_scores_gemma":[0.00033340137,0.00012118699,0.0010766713,0.00027567672,0.000045383593,0.000010117899,0.00018436613,0.00025218134,0.6618688,0.000054431788,0.33557385,0.00020394195],"about_ca_topic_score_codex":0.00036158977,"about_ca_topic_score_gemma":0.000016080166,"teacher_disagreement_score":0.28036144,"about_ca_system_score_codex":0.00013168438,"about_ca_system_score_gemma":0.00027725438,"threshold_uncertainty_score":0.99998325},"labels":[],"label_agreement":null},{"id":"W4405005139","doi":"10.3390/v16121878","title":"Evolutionary Relationships of Unclassified Coronaviruses in Canadian Bat Species","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; University of Lethbridge; Canadian Food Inspection Agency","funders":"","keywords":"Biology; Phylogenetic tree; Phylogenetics; Coronavirus; Subgenus; Genetic diversity; Evolutionary biology; Betacoronavirus; Zoology; Virology; Genetics; Gene; Coronavirus disease 2019 (COVID-19); Taxonomy (biology); Infectious disease (medical specialty)","score_opus":0.1594589676997607,"score_gpt":0.37098044996042023,"score_spread":0.21152148226065953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405005139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9673455,0.0056936876,0.000008808103,0.000545676,0.00020486828,0.0002253001,0.00007518853,0.00007037755,0.02583059],"genre_scores_gemma":[0.99222696,0.00002342082,0.00007135145,0.007271741,0.000117774616,0.000020874002,0.0000049388227,0.000020002204,0.00024293596],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.998913,0.00006215697,0.00023634116,0.00020651855,0.00028789236,0.00029412154],"domain_scores_gemma":[0.9992811,0.00035674992,0.00001745719,0.00021546983,0.000062077124,0.000067134846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025957968,0.00010063639,0.00017642784,0.00064847997,0.00006086894,0.000022283506,0.0000949619,0.000102677026,0.00014226275],"category_scores_gemma":[0.0004458455,0.00008859865,0.00005737748,0.00065308507,0.00015171971,0.00014357771,0.00002849686,0.00031233887,0.0003225384],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009246957,0.000055193374,0.9370911,0.00015250989,0.00004060324,0.00022770143,0.0003209776,0.0000017100913,0.040879037,0.013845455,0.0065172,0.0007760524],"study_design_scores_gemma":[0.00022769769,0.000057923513,0.3863769,0.0002111679,0.000017162847,0.000016151474,0.00020956477,0.00023422077,0.015099034,0.0005331231,0.59693927,0.00007780382],"about_ca_topic_score_codex":0.13968042,"about_ca_topic_score_gemma":0.22848818,"teacher_disagreement_score":0.5904221,"about_ca_system_score_codex":0.0004209069,"about_ca_system_score_gemma":0.0016669917,"threshold_uncertainty_score":0.8660485},"labels":[],"label_agreement":null},{"id":"W4405333611","doi":"10.3390/v16121910","title":"Understanding Perceptions of Hepatitis C and Its Management Among People with Experience of Incarceration in Quebec, Canada: A Qualitative Study Guided by the Common Sense Self-Regulation Model","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; University of Ottawa; Jewish General Hospital; Queen's University; Ottawa Hospital; McGill University Health Centre","funders":"","keywords":"Prison; Hepatitis C; Medicine; Coping (psychology); Qualitative research; Stigma (botany); Perception; Psychiatry; Clinical psychology; Psychology; Immunology","score_opus":0.09467494918111306,"score_gpt":0.3754936907191685,"score_spread":0.2808187415380554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405333611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99702895,0.00009931278,0.0012280555,0.00019056325,0.000008965231,0.00091615214,0.000038478185,0.000018189961,0.0004713396],"genre_scores_gemma":[0.9994144,0.00011534363,0.00008076619,0.0000358902,0.000004701328,0.00009564126,0.000011371985,0.000013106175,0.00022878159],"study_design_codex":"qualitative","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99874073,0.0002155371,0.00027963682,0.0001744498,0.00047254577,0.00011710468],"domain_scores_gemma":[0.9995349,0.00016027101,0.00004986033,0.00014312447,0.00007127535,0.000040541498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028118654,0.0000895229,0.00018802025,0.00014614066,0.000069104906,0.000024419385,0.000039942235,0.000023955667,0.000023193244],"category_scores_gemma":[0.000027859254,0.00006494087,0.000012383733,0.0003874359,0.00007444507,0.00019822764,0.0000419208,0.00009039928,3.6802598e-7],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014900039,0.0002949458,0.3863585,0.0005244039,0.0002612817,0.00004749892,0.59815174,0.0019071357,0.0065048337,0.0025501347,0.0028591498,0.00039137213],"study_design_scores_gemma":[0.0012522596,0.00031057597,0.33868703,0.0005452012,0.00013176279,0.0000036091926,0.26854482,0.38790467,0.0022985681,0.000113415095,0.000029464345,0.00017859819],"about_ca_topic_score_codex":0.80763054,"about_ca_topic_score_gemma":0.98512024,"teacher_disagreement_score":0.38599753,"about_ca_system_score_codex":0.00048591825,"about_ca_system_score_gemma":0.00019697059,"threshold_uncertainty_score":0.2648212},"labels":[],"label_agreement":null},{"id":"W4405367012","doi":"10.3390/v16121915","title":"Phenotypic Differences Between the Epidemic Strains of Vesicular Stomatitis Virus Serotype Indiana 98COE and IN0919WYB2 Using an In-Vivo Pig (Sus scrofa) Model","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Canadian Food Inspection Agency","funders":"Agricultural Research Service; U.S. Department of Agriculture","keywords":"Biology; Vesicular stomatitis virus; Virology; Outbreak; Virus; Serotype; Virulence; Vesicular Stomatitis; Intergenic region; Microbiology; Gene; Genome; Genetics","score_opus":0.07235963912629366,"score_gpt":0.3439070741822969,"score_spread":0.2715474350560032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405367012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99205935,0.0067138975,0.0005673674,0.00007214598,0.00004499589,0.00027162037,0.00020724267,0.000020264342,0.000043101245],"genre_scores_gemma":[0.9985,0.0007941457,0.00025805924,0.00020255773,0.00014960468,0.000017268636,0.00001788544,0.000039109753,0.000021372394],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850637,0.00024065835,0.0002977291,0.0004078938,0.00022148911,0.0003258345],"domain_scores_gemma":[0.9993282,0.000059529084,0.000064651016,0.00040991692,0.000042149288,0.000095571675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047876578,0.00020453327,0.00025231717,0.0001473581,0.00009864522,0.00006577974,0.0003378792,0.00016674516,0.000030723677],"category_scores_gemma":[0.000058240552,0.0001578754,0.000058679416,0.00024287183,0.00027135343,0.000022377659,0.00013391675,0.00020068914,0.0000033299748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011368071,0.000040600735,0.02037027,0.00007103178,0.00011532888,0.000007062791,0.0002988497,0.0010362164,0.972804,0.00007496034,0.00006702256,0.005000986],"study_design_scores_gemma":[0.00043101897,0.0011085044,0.017421883,0.00013127307,0.000058487425,0.000006209624,0.00018267662,0.0151726445,0.96350527,0.0014265719,0.00020338684,0.00035208653],"about_ca_topic_score_codex":0.00049049413,"about_ca_topic_score_gemma":0.0012527239,"teacher_disagreement_score":0.014136428,"about_ca_system_score_codex":0.000024594168,"about_ca_system_score_gemma":0.00022854106,"threshold_uncertainty_score":0.64379716},"labels":[],"label_agreement":null},{"id":"W4405937755","doi":"10.3390/v17010054","title":"Exploiting the Achilles’ Heel of Viral RNA Processing to Develop Novel Antivirals","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"Biology; Viral replication; RNA; Virology; Virus; Proteases; Influenza A virus; Viral entry; Gene; Genetics; Enzyme","score_opus":0.04973815572800886,"score_gpt":0.3472705111896577,"score_spread":0.2975323554616488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405937755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925179,0.0037369037,0.0023095089,0.00038708156,0.00008690766,0.00020902982,0.00004008808,0.000030902163,0.00068169314],"genre_scores_gemma":[0.9975502,0.00011989307,0.00071196014,0.0010115759,0.00027198083,0.00003658205,0.000011464107,0.00004214628,0.00024423134],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998905,0.000056974914,0.00022106575,0.00031421753,0.00022020844,0.00028252025],"domain_scores_gemma":[0.99947447,0.000032687778,0.000039520273,0.00027520175,0.00012534851,0.0000527743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004415139,0.0001442085,0.00012704053,0.000080350794,0.00011605156,0.00008006082,0.00032676372,0.000070379065,0.000017605797],"category_scores_gemma":[0.00017797996,0.00010271821,0.00005436621,0.0003954458,0.00009245053,0.000010126515,0.00019615234,0.00011449541,0.000035263456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002111124,0.000029557563,0.00014715426,0.000046894398,0.000046372224,0.0000022050522,0.0002243586,0.00005738765,0.9599761,0.000071136375,0.0007654998,0.038422257],"study_design_scores_gemma":[0.00014165159,0.00042573825,0.000217973,0.000088540895,0.000008070167,0.0000048174693,0.0001737016,0.00009088361,0.97603106,0.000029042529,0.022647075,0.00014145537],"about_ca_topic_score_codex":0.000024944,"about_ca_topic_score_gemma":0.000046798286,"teacher_disagreement_score":0.0382808,"about_ca_system_score_codex":0.000012932419,"about_ca_system_score_gemma":0.00026993157,"threshold_uncertainty_score":0.41887268},"labels":[],"label_agreement":null},{"id":"W4406621392","doi":"10.3390/v17010135","title":"Evaluation of Cognitive Functions in People Living with HIV Before and After COVID-19 Infection","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Montreal Cognitive Assessment; Coronavirus disease 2019 (COVID-19); Medicine; Cognition; Human immunodeficiency virus (HIV); Prospective cohort study; Internal medicine; Observational study; Pandemic; Gerontology; Cognitive impairment; Immunology; Psychiatry; Disease","score_opus":0.021311154935732178,"score_gpt":0.34028574669879724,"score_spread":0.3189745917630651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406621392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99565226,0.00018750681,0.001979372,0.00058261433,0.00006611806,0.00082232966,0.000014846337,0.000045254485,0.0006496912],"genre_scores_gemma":[0.99752295,0.000011736574,0.000040252122,0.002047725,0.00003299376,0.0002197781,0.000011304999,0.000009927538,0.000103356055],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990843,0.00016144797,0.0001540047,0.00019558388,0.00029722962,0.00010742697],"domain_scores_gemma":[0.99863434,0.0008891038,0.000061032908,0.0001248269,0.00021645376,0.00007426136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068186544,0.00010034747,0.00018476859,0.00037003102,0.00004833553,0.000013644235,0.000017734923,0.000062716514,0.00014174035],"category_scores_gemma":[0.0048764097,0.000082400984,0.000025668951,0.00040610207,0.00007702415,0.00017686469,0.0000334583,0.00009946817,0.000008085627],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030684148,0.00012640408,0.9954042,0.0003976305,0.00007717682,0.000004488016,0.0011183714,0.00007688431,0.00029418082,0.000035102366,0.00011190513,0.0020468524],"study_design_scores_gemma":[0.0024175947,0.00033706657,0.99379426,0.0012135608,0.00063527405,0.000009155669,0.00028088098,0.00054071564,0.00042258715,0.00016014517,0.00011977233,0.0000689899],"about_ca_topic_score_codex":0.0009820486,"about_ca_topic_score_gemma":0.011532429,"teacher_disagreement_score":0.010550381,"about_ca_system_score_codex":0.00022470925,"about_ca_system_score_gemma":0.0006707709,"threshold_uncertainty_score":0.6435366},"labels":[],"label_agreement":null},{"id":"W4406687352","doi":"10.3390/v17020141","title":"Phylogeographic Characterizations of Recent (2015–2023) Senecavirus A Isolates from Canada","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Phylogeography; Vesicular Stomatitis; China; Vesicular stomatitis virus; Biology; Phylogenetics; Genome; Phylogenetic tree; Virology; Virus; Geography; Evolutionary biology; Genetics; Gene; Archaeology","score_opus":0.031451573217325314,"score_gpt":0.2549235789633671,"score_spread":0.22347200574604179,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406687352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945738,0.0006253098,0.000004512994,0.002617848,0.00017304037,0.00009385329,0.00040811975,0.000026983404,0.0014765478],"genre_scores_gemma":[0.9953757,0.0008009061,0.000014234262,0.0034519653,0.000059904316,0.000010834125,0.00016801392,4.3734116e-7,0.000117997566],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99934465,0.00006260914,0.00019815766,0.00017967314,0.000059254333,0.00015564839],"domain_scores_gemma":[0.9995924,0.0001959265,0.00007643955,0.000050412535,0.000042294225,0.000042487452],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000057352467,0.00008833019,0.00016476258,0.000016663704,0.00009362413,0.000011826967,0.00016584259,0.000042761007,0.0013220765],"category_scores_gemma":[0.00007876238,0.0000372474,0.000043725246,0.00039327893,0.0000429598,0.000047475707,0.00007602333,0.000041084382,0.000010901818],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007379999,0.00009712604,0.55747056,0.000010206047,0.00011447332,0.000002598043,0.000009089424,0.00000521372,0.39478898,0.0018394779,0.018204184,0.0273843],"study_design_scores_gemma":[0.00004357623,0.00002409101,0.8116547,0.000011500252,0.000024567666,2.92163e-8,0.000059774313,0.000024780764,0.0012603713,0.00070303446,0.18612371,0.00006988534],"about_ca_topic_score_codex":0.51986676,"about_ca_topic_score_gemma":0.50556797,"teacher_disagreement_score":0.3935286,"about_ca_system_score_codex":0.000011970308,"about_ca_system_score_gemma":0.000025182479,"threshold_uncertainty_score":0.9995909},"labels":[],"label_agreement":null},{"id":"W4406782642","doi":"10.3390/v17020161","title":"Antibodies Against SARS-CoV-2 Do Not Cross-React with Endemic Coronaviruses in a Pediatric Population: Data from a Bangladesh Cohort","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"National Institute of Allergy and Infectious Diseases; International Centre for Diarrhoeal Disease Research, Bangladesh","keywords":"Antibody; Virology; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Pandemic; Immunology; Medicine; Population; Coronavirus; Biology; Disease; Infectious disease (medical specialty); Internal medicine; Environmental health","score_opus":0.10190770261833515,"score_gpt":0.41138677525840506,"score_spread":0.3094790726400699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406782642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929712,0.0027699082,0.000027654838,0.000092584225,0.00019057182,0.0007191051,0.0004078976,0.00018538623,0.0026357172],"genre_scores_gemma":[0.9531693,0.00020223788,0.00023857951,0.04575665,0.0003447821,0.000058963582,0.0001554873,0.000048436763,0.000025561503],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971205,0.00010323675,0.0005724157,0.0009526268,0.0007073868,0.00054385304],"domain_scores_gemma":[0.99774075,0.00052578497,0.00013592052,0.0014176911,0.00014050669,0.0000393445],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00043631595,0.0003591515,0.0006449607,0.0006102521,0.00014176975,0.00019343324,0.00066003966,0.00021715097,0.000018569055],"category_scores_gemma":[0.00055669097,0.0002933025,0.00007481111,0.0010489153,0.00020219562,0.00058359967,0.0004358596,0.00053027406,0.00015371336],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011818435,0.00024604597,0.94207007,0.00013361029,0.00014563925,0.00025430816,0.000090591966,0.0000012760266,0.052946247,0.000065919834,0.0014532222,0.0014112034],"study_design_scores_gemma":[0.002596257,0.000088196146,0.9050628,0.0002634203,0.00017621383,0.000007995749,0.00005264185,0.00015645917,0.056336984,0.00006979536,0.034894746,0.00029452253],"about_ca_topic_score_codex":0.0102389,"about_ca_topic_score_gemma":0.0028423676,"teacher_disagreement_score":0.045664065,"about_ca_system_score_codex":0.0002007011,"about_ca_system_score_gemma":0.00061027065,"threshold_uncertainty_score":0.9999519},"labels":[],"label_agreement":null},{"id":"W4406844796","doi":"10.3390/v17020174","title":"Detection of Foodborne Viruses in Dates Using ISO 15216 Methodology","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Norovirus; Outbreak; Hepatitis a virus; Contaminated food; Virology; Foodborne pathogen; Hepatitis A; Biology; Food contaminant; Food microbiology; Food science; Virus; Microbiology; Hepatitis; Listeria monocytogenes; Bacteria","score_opus":0.22584916645668782,"score_gpt":0.45646763548652997,"score_spread":0.23061846902984215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406844796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989177,0.0012120742,0.008707159,0.00023448862,0.00015814634,0.0001829824,0.000012931709,0.000027828482,0.00028740297],"genre_scores_gemma":[0.99128217,0.00032440043,0.006596293,0.0016782228,0.00005111216,0.000012790008,0.0000031662096,0.0000096505755,0.00004221708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985598,0.00044507362,0.00038490075,0.00021606676,0.00008586831,0.00030829868],"domain_scores_gemma":[0.99939555,0.00021372223,0.00006974113,0.0002038433,0.00006111197,0.00005605817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006438813,0.00010111872,0.00045923854,0.00043109685,0.000029461335,0.0000043427926,0.00008611011,0.00010313612,0.000067072426],"category_scores_gemma":[0.0022341993,0.00008817813,0.000065451124,0.0003460353,0.00016312444,0.000082113744,0.00008581564,0.000191056,0.000008073262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077654555,0.00008259407,0.1457102,0.00010029962,0.00005539352,0.00001598742,0.00002448772,0.000027382772,0.8431075,0.0001682444,0.00014817748,0.009783135],"study_design_scores_gemma":[0.0022700245,0.0011415204,0.22350466,0.0004302818,0.000069036105,0.000054742963,0.0002670017,0.0009687469,0.7611816,0.0016235821,0.008372958,0.00011582882],"about_ca_topic_score_codex":0.0023407121,"about_ca_topic_score_gemma":0.0007196164,"teacher_disagreement_score":0.08192593,"about_ca_system_score_codex":0.00005823672,"about_ca_system_score_gemma":0.00007299334,"threshold_uncertainty_score":0.35957998},"labels":[],"label_agreement":null},{"id":"W4407750745","doi":"10.3390/v17020285","title":"PRV-1 Virulence in Atlantic Salmon Is Affected by Host Genotype","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Prince Edward Island; Fisheries and Oceans Canada","funders":"Agricultural Research Service; Norges Miljø- og Biovitenskapelige Universitet; Fisheries and Oceans Canada; U.S. Department of Agriculture","keywords":"Virulence; Host (biology); Genotype; Biology; Genetics; Zoology; Gene","score_opus":0.007942315633050388,"score_gpt":0.2462729842232038,"score_spread":0.2383306685901534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407750745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98499066,0.009849125,0.000051212304,0.00041902365,0.00040989096,0.000362372,0.000090220805,0.0001181737,0.003709307],"genre_scores_gemma":[0.98814654,0.0003305655,0.000012394355,0.0030605975,0.000009566892,0.000019350722,0.00016221365,0.000010444477,0.00824835],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991112,0.00008783337,0.00018259296,0.00030828538,0.000018865287,0.0002912411],"domain_scores_gemma":[0.9996441,0.000042385534,0.000049269194,0.00023030344,0.000022164751,0.000011777093],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007508209,0.00016860425,0.00019820507,0.00014082735,0.00008937461,0.000021561375,0.00023974638,0.00016416116,0.000790497],"category_scores_gemma":[0.00003763516,0.00014716151,0.00005208292,0.00031964292,0.00010007275,0.00008408737,0.00011698103,0.0001592277,0.0015225576],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008057419,0.00014807502,0.010494408,0.000032245298,0.00009166018,0.0000050471654,0.00011022766,1.8928951e-7,0.7722868,0.0005397197,0.21556264,0.000648426],"study_design_scores_gemma":[0.0012995338,0.0000520722,0.052965093,0.00013023843,0.00009208484,0.0000017531379,0.00012262465,0.0000013430457,0.34356013,0.00005771528,0.6014447,0.0002727307],"about_ca_topic_score_codex":0.0005879981,"about_ca_topic_score_gemma":0.00013234967,"teacher_disagreement_score":0.42872667,"about_ca_system_score_codex":0.000032281983,"about_ca_system_score_gemma":0.00002836023,"threshold_uncertainty_score":0.9992549},"labels":[],"label_agreement":null},{"id":"W4407767321","doi":"10.3390/v17030295","title":"Viral Appropriation of Specificity Protein 1 (Sp1): The Role of Sp1 in Human Retro- and DNA Viruses in Promoter Activation and Beyond","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Li Ka Shing Institute of Virology, University of Alberta; University of Alberta","keywords":"Biology; Computational biology; Epigenetics; Sp1 transcription factor; Transcription factor; Promoter; DNA; Transcription (linguistics); Genetics; Gene; Gene expression","score_opus":0.02407543655927309,"score_gpt":0.30888401305925883,"score_spread":0.28480857649998575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407767321","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47623482,0.5226628,0.000030108806,0.0000047835224,0.000014903062,0.00079999375,0.000032372584,0.0000018985731,0.00021827676],"genre_scores_gemma":[0.23555978,0.7638696,0.0002321261,0.00001873874,0.00008020623,0.00010239246,0.00008211368,0.000023071998,0.00003200442],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879634,0.00020619361,0.00049161346,0.00029322496,0.00010754853,0.00010510144],"domain_scores_gemma":[0.99930805,0.00004208621,0.0003519803,0.00024094008,0.00004132898,0.000015596186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003506261,0.0001799123,0.00044931937,0.00016158562,0.000029299445,0.000016156027,0.00010762095,0.00027233214,0.000002937646],"category_scores_gemma":[0.00015405988,0.00013612577,0.00005782825,0.00016334203,0.00008660874,0.000008024057,0.00010728915,0.00013161772,1.331787e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004251233,0.000110841924,0.0016396629,0.003132749,0.000039087437,2.4495432e-7,0.00011026691,0.0000022151648,0.73878485,0.00046236222,0.0000034284376,0.25567177],"study_design_scores_gemma":[0.00031632514,0.00023194551,0.0016812237,0.0021779875,0.00006328251,3.354809e-7,0.000062753556,0.000005868704,0.9274993,0.0018971491,0.06584025,0.0002236088],"about_ca_topic_score_codex":0.00019527257,"about_ca_topic_score_gemma":0.00013353146,"teacher_disagreement_score":0.25544816,"about_ca_system_score_codex":0.000017060687,"about_ca_system_score_gemma":0.00007506358,"threshold_uncertainty_score":0.5551048},"labels":[],"label_agreement":null},{"id":"W4407923105","doi":"10.3390/v17030314","title":"High-Performance Genome Annotation for a Safer and Faster-Developing Phage Therapy","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"SAFER; Genome; Annotation; Computational biology; Biology; Phage therapy; Computer science; Medicine; Genetics; Bacteriophage; Gene","score_opus":0.021994429320933876,"score_gpt":0.27269345176530624,"score_spread":0.25069902244437237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407923105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953069,0.0000739275,0.0034673268,0.0002449264,0.00016341908,0.00018459224,0.000015684253,0.00002248153,0.00052073476],"genre_scores_gemma":[0.9939725,0.00027598883,0.002559252,0.0019959388,0.000023378698,0.00003451775,0.000006073381,0.000005980702,0.0011263813],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996352,0.000007530097,0.00009398811,0.00013366576,0.00002631824,0.00010328494],"domain_scores_gemma":[0.9998615,0.000024481249,0.000026871703,0.00006846795,0.0000049805412,0.00001372259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000040180545,0.000065177155,0.000063497224,0.000026095002,0.00013022737,0.000038895436,0.000054167995,0.000023601933,0.00025430543],"category_scores_gemma":[0.0000041429726,0.000056769102,0.000013041765,0.000080854436,0.000037890102,0.00027483984,0.000039113675,0.00003037581,0.00005284343],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036843096,0.000016080821,0.0011689246,0.0000093172175,0.000010487366,1.9308398e-7,0.00015638075,0.000035086185,0.9432338,0.00011473892,0.0003259743,0.054892156],"study_design_scores_gemma":[0.000530473,0.00006616527,0.56330746,0.000027747836,0.000007623689,0.0000019909146,0.000040362935,0.00011427173,0.18917885,0.0001267095,0.2464587,0.00013965038],"about_ca_topic_score_codex":0.000116184194,"about_ca_topic_score_gemma":0.00003311585,"teacher_disagreement_score":0.75405496,"about_ca_system_score_codex":0.000040552226,"about_ca_system_score_gemma":0.000005637271,"threshold_uncertainty_score":0.2784466},"labels":[],"label_agreement":null},{"id":"W4407924517","doi":"10.3390/v17030312","title":"Dynamics of a Panzootic: Genomic Insights, Host Range, and Epidemiology of the Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b in the United States","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; St. Jude Children's Research Hospital","keywords":"Influenza A virus subtype H5N1; Clade; Outbreak; Biology; Transmission (telecommunications); Virus; Virology; Host (biology); Highly pathogenic; Influenza A virus; Epidemiology; Lineage (genetic); Avian influenza virus; Zoology; Phylogenetics; Genetics; Medicine; Gene","score_opus":0.15421527659119344,"score_gpt":0.4224797417820111,"score_spread":0.26826446519081765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407924517","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03783207,0.9585886,0.0000041371623,0.00027332557,0.00009343866,0.0022829,0.0007902643,0.000020796158,0.00011444328],"genre_scores_gemma":[0.0008315904,0.9958413,0.00007773133,0.0028122745,0.000057551362,0.0001936506,0.00008789661,0.000048084374,0.000049915016],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99445564,0.0023913847,0.0017453667,0.00048738718,0.0003707177,0.0005494836],"domain_scores_gemma":[0.9911795,0.0065710195,0.0008431275,0.0011162492,0.00020949876,0.000080606376],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012308593,0.0005587924,0.0031109867,0.00096543384,0.00013143185,0.000009428249,0.00076004455,0.00044370798,0.000010933607],"category_scores_gemma":[0.0042097797,0.0002770282,0.000465756,0.0016641496,0.0011990336,0.000050607916,0.0006193893,0.0011031647,0.000008275649],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016366619,0.0016328496,0.35916394,0.2703356,0.008187662,0.00023745773,0.010274712,0.00011522794,0.00027066522,0.025588347,0.0023851474,0.32017174],"study_design_scores_gemma":[0.0016849526,0.00038924,0.07968734,0.024858935,0.0024178026,0.00003643932,0.00054565864,0.000073341114,0.000013241477,0.0006971828,0.8891451,0.0004507876],"about_ca_topic_score_codex":0.0021932148,"about_ca_topic_score_gemma":0.0010106586,"teacher_disagreement_score":0.88675994,"about_ca_system_score_codex":0.00024954084,"about_ca_system_score_gemma":0.00065201556,"threshold_uncertainty_score":0.9999682},"labels":[],"label_agreement":null},{"id":"W4407937464","doi":"10.3390/v17030315","title":"Presence of Soybean Vein Necrosis Orthotospovirus (Tospoviridae: Orthotospovirus) in Pakistan, Pakistani Scientists’ and Farmers’ Perception of Disease Dynamics and Management, and Policy Recommendations to Improve Soybean Production","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Pennsylvania Soybean Board","keywords":"Agriculture; Indigenous; Cultivar; Biotechnology; Biology; Agroforestry; Socioeconomics; Geography; Agronomy; Sociology","score_opus":0.021141737380719627,"score_gpt":0.3172798145562784,"score_spread":0.2961380771755588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407937464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995789,0.00022861172,0.000017437465,0.0014271778,0.00007378882,0.0009110594,0.0012997605,0.00002806289,0.00022513261],"genre_scores_gemma":[0.9965227,0.0024353256,0.00023624522,0.00017568682,0.000023510436,0.00007365424,0.000050650866,0.0000023912735,0.00047979548],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983256,0.00011861483,0.00040728686,0.00057194015,0.0002562823,0.00032026527],"domain_scores_gemma":[0.99930364,0.0001861583,0.00013300151,0.00012659858,0.00009884757,0.00015177617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046459978,0.00019410934,0.00027773718,0.00022582323,0.00027138513,0.00008905404,0.00017502309,0.000053383617,0.000022337439],"category_scores_gemma":[0.00021075718,0.00011100246,0.00003535399,0.0011818622,0.00040719594,0.00030758718,0.00037321475,0.00010340486,0.0000012822125],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006136433,0.00025619095,0.22071141,0.00039982682,0.00006653925,0.000004948528,0.00062424043,0.0000029655146,0.69758296,0.0040644254,0.00055596756,0.07511686],"study_design_scores_gemma":[0.0003230849,0.00019092651,0.98635215,0.00026125577,0.000043610795,9.657515e-7,0.004020658,0.00013888389,0.005988154,0.0005678564,0.0018829466,0.00022953333],"about_ca_topic_score_codex":0.0037704343,"about_ca_topic_score_gemma":0.006688986,"teacher_disagreement_score":0.76564074,"about_ca_system_score_codex":0.00007246478,"about_ca_system_score_gemma":0.000029094852,"threshold_uncertainty_score":0.56997937},"labels":[],"label_agreement":null},{"id":"W4408294678","doi":"10.3390/v17030393","title":"Coevolution of Lentiviral Vif with Host A3F and A3G: Insights from Computational Modelling and Ancestral Sequence Reconstruction","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; International Development Research Centre; Canadian Institutes of Health Research; Leukemia and Lymphoma Society of Canada","keywords":"Coevolution; Biology; Evolutionary biology; Viral evolution; Genetics; Computational biology; Gene; Genome","score_opus":0.03674028104905406,"score_gpt":0.27580490298400334,"score_spread":0.2390646219349493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408294678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918107,0.0034369023,0.004287425,0.000029093819,0.000052934964,0.00008613669,0.00012958325,0.0000099982635,0.00015726958],"genre_scores_gemma":[0.99832046,0.00018717434,0.0013571674,0.000014787882,0.0000044201283,0.0000050040103,0.00006832549,0.0000019866193,0.000040678216],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99961436,0.000047911708,0.000091558555,0.00014367288,0.00001998551,0.00008250107],"domain_scores_gemma":[0.9997968,0.00007669901,0.000035914152,0.000045946545,0.00003510821,0.000009505977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000020427357,0.00006118871,0.00010009595,0.00006331707,0.00009460887,0.000008906188,0.000023339462,0.000048904785,0.000015579062],"category_scores_gemma":[0.000004936698,0.00004752288,0.000008821976,0.00005673781,0.000306344,0.00012341923,0.000016348076,0.00006563061,0.000009554925],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016708053,0.00029126808,0.456112,0.00008121247,0.0010266679,0.000015834956,0.0009975409,0.0038325996,0.4847336,0.007795239,0.00016592427,0.043277297],"study_design_scores_gemma":[0.010733908,0.0015971218,0.52523166,0.00094846456,0.00028282485,0.00013818883,0.0012691767,0.007920212,0.42794615,0.020265859,0.003075317,0.0005911106],"about_ca_topic_score_codex":0.0006798889,"about_ca_topic_score_gemma":0.00010685863,"teacher_disagreement_score":0.069119655,"about_ca_system_score_codex":0.000015139683,"about_ca_system_score_gemma":0.00005536548,"threshold_uncertainty_score":0.19379267},"labels":[],"label_agreement":null},{"id":"W4408450720","doi":"10.3390/v17030420","title":"Bunyaviral Cap-Snatching Endonuclease Activity and Inhibition with Baloxavir-like Inhibitors in the Context of Full-Length L Proteins","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Endonuclease; Exonuclease; Polymerase; Biology; RNA; Virology; RNA polymerase; Molecular biology; Virus; DNA; Genetics; Gene","score_opus":0.01635976955540583,"score_gpt":0.2764483626066635,"score_spread":0.26008859305125764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408450720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974866,0.00019657734,0.000083537736,0.0005780993,0.00006718048,0.0006199799,0.000015792742,0.000032453543,0.0009197696],"genre_scores_gemma":[0.998744,0.000036501846,0.00006112042,0.0010159044,0.000042514006,0.000049186277,0.0000033555457,0.000009245716,0.000038176146],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925184,0.00009189238,0.00017921286,0.00018556119,0.00014715818,0.00014435225],"domain_scores_gemma":[0.9995886,0.00008159358,0.0000731022,0.00018018545,0.000040274714,0.00003623237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019809704,0.0001311546,0.00021858024,0.00018887233,0.00009859165,0.000023928624,0.000034651257,0.00006434771,0.000013273612],"category_scores_gemma":[0.00006317645,0.00008266192,0.00004199331,0.00030063334,0.00014205203,0.00020795125,0.000030730553,0.000256981,0.0000022680701],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017688092,0.0012915526,0.21454549,0.00036589178,0.000136338,0.00007803063,0.0030828596,0.000017626931,0.73427993,0.0032115767,0.0008236374,0.04039823],"study_design_scores_gemma":[0.011276733,0.004509098,0.53573185,0.0024737413,0.00047600476,0.00014816955,0.008633522,0.00034793228,0.42241904,0.00054004433,0.012793965,0.00064987544],"about_ca_topic_score_codex":0.0035829872,"about_ca_topic_score_gemma":0.0028097855,"teacher_disagreement_score":0.3211864,"about_ca_system_score_codex":0.000042715816,"about_ca_system_score_gemma":0.000073285766,"threshold_uncertainty_score":0.5416429},"labels":[],"label_agreement":null},{"id":"W4408571284","doi":"10.3390/v17030437","title":"Adapting Next-Generation Sequencing to in Process CRISPR-Cas9 Genome Editing of Recombinant AcMNPV Vectors: From Shotgun to Tiled-Amplicon Sequencing","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"CRISPR; Biology; Cas9; Autographa californica; Genome editing; Amplicon; Genome; Subgenomic mRNA; Computational biology; Shotgun; Sf9; Genetics; Recombinant DNA; Gene; Virology; Spodoptera; Polymerase chain reaction","score_opus":0.07426223361428597,"score_gpt":0.3284823653836831,"score_spread":0.2542201317693971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408571284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995519,0.00043924386,0.0024896872,0.000099128774,0.0006819746,0.00036025603,0.00003958529,0.000026138045,0.00034502288],"genre_scores_gemma":[0.9970102,0.000026222424,0.0007330851,0.0015130985,0.00046061716,0.00011031678,0.0000636959,0.000025594034,0.00005720261],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985013,0.00007815625,0.00044911352,0.0005275054,0.000138692,0.00030520704],"domain_scores_gemma":[0.9992645,0.000031314485,0.00012626509,0.00033121576,0.00013612473,0.000110614346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019381418,0.00020385048,0.00024276563,0.00018071976,0.00012334198,0.00006851057,0.000216528,0.00013779128,0.000033034812],"category_scores_gemma":[0.00038372818,0.00020607715,0.000073355426,0.00034107378,0.000020398342,0.000024114606,0.00017330179,0.000104133855,0.000006417511],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056975456,0.000033593587,0.0049998173,0.000048580507,0.000027215568,0.000003154583,0.00036311542,0.0066088,0.9860736,0.000043131975,0.00065864436,0.0010833688],"study_design_scores_gemma":[0.00027077232,0.00021745452,0.0015043106,0.00024918845,0.000018358256,0.0000012633263,0.00077626057,0.00043972794,0.994355,0.0001846235,0.0017454347,0.00023757399],"about_ca_topic_score_codex":0.0012926584,"about_ca_topic_score_gemma":0.0008357537,"teacher_disagreement_score":0.008281429,"about_ca_system_score_codex":0.00013041921,"about_ca_system_score_gemma":0.00021424,"threshold_uncertainty_score":0.84035826},"labels":[],"label_agreement":null},{"id":"W4409001242","doi":"10.3390/v17040503","title":"Cyclooxygenase-2/Prostaglandin E2 Pathway Facilitates Infectious Bronchitis Virus-Induced Necroptosis in Chicken Macrophages, a Caspase-Independent Cell Death","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Necroptosis; Programmed cell death; Apoptosis; Biology; Inflammasome; Coronavirus; Viral replication; Caspase; Virology; Cell biology; Virus; Immunology; Inflammation; Medicine; Coronavirus disease 2019 (COVID-19); Internal medicine","score_opus":0.023560004173945475,"score_gpt":0.24538234430884837,"score_spread":0.2218223401349029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409001242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99070024,0.0010896825,0.0000060912043,0.00018188605,0.00027369376,0.00055062416,0.00043389865,0.00026252418,0.0065013324],"genre_scores_gemma":[0.99796194,0.00049952,0.00003425043,0.00058414723,0.000106856605,0.00017882643,0.000031142685,0.0000040920027,0.0005992141],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99778557,0.00018931663,0.0004735287,0.0006677178,0.00025825066,0.00062559324],"domain_scores_gemma":[0.9991902,0.00035826617,0.0001216091,0.00014303772,0.00007557341,0.00011129901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002471164,0.00039483196,0.00043454877,0.000117322845,0.0006046086,0.00014520598,0.00029308008,0.00020617312,0.00039155193],"category_scores_gemma":[0.00014457312,0.0001911945,0.00017112019,0.0009216807,0.00009251149,0.00021908277,0.00028987817,0.00035098608,0.00024325936],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077680554,0.00041057693,0.22371835,0.000027922892,0.000051091985,0.00004494489,0.0002103286,0.000015186495,0.76217705,0.0003314598,0.00047269504,0.012462734],"study_design_scores_gemma":[0.00070443976,0.0006464479,0.70672387,0.000075418044,0.00003458128,0.000009886033,0.00072717224,0.000018621571,0.26946825,0.0006422586,0.020400776,0.00054826844],"about_ca_topic_score_codex":0.02788405,"about_ca_topic_score_gemma":0.03563909,"teacher_disagreement_score":0.49270877,"about_ca_system_score_codex":0.00020967066,"about_ca_system_score_gemma":0.00004039032,"threshold_uncertainty_score":0.981958},"labels":[],"label_agreement":null},{"id":"W4409161212","doi":"10.3390/v17040527","title":"Genetic and Phenotypic Investigations of Viral Subpopulations Detected in Different Tissues of Laying Hens Following Infectious Bronchitis Virus Infection","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Cumming School of Medicine, University of Calgary; Egg Farmers of Canada","keywords":"Biology; Infectious bronchitis virus; Virus; Hypervariable region; Gene; Virology; Avian infectious bronchitis; Avian infectious bronchitis virus; Coding region; Phylogenetic tree; Population; Phenotype; Genetics; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Pathology; Disease","score_opus":0.026638800536044283,"score_gpt":0.2616447384922701,"score_spread":0.23500593795622582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409161212","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99877083,0.00053618004,0.000049834416,0.000035611596,0.00011174363,0.0001965641,0.000026455053,0.000058258178,0.00021450278],"genre_scores_gemma":[0.999599,0.00020006247,0.00008798714,0.00003244177,0.000031736,0.000029729845,0.0000048330553,0.0000012381302,0.0000129831415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99918556,0.000084708,0.00032817005,0.00017549348,0.00008807845,0.00013800159],"domain_scores_gemma":[0.9995555,0.00022173703,0.0001058473,0.000046511108,0.000044520333,0.000025838299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055367324,0.00012327591,0.00023412345,0.000096354626,0.00020619268,0.000017501328,0.000050783045,0.000068810084,0.000021960406],"category_scores_gemma":[0.00020222699,0.00006379726,0.00005950466,0.0006048653,0.00011767991,0.000107906926,0.00007918541,0.00008429595,0.0000013436018],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005236083,0.00005750158,0.75825995,0.000013484171,0.000026297492,2.6843276e-7,0.00007601471,0.00004761143,0.23579846,0.00034732142,0.000007536997,0.005360298],"study_design_scores_gemma":[0.00014390546,0.00013776866,0.984742,0.00008054154,0.000042313746,7.891618e-7,0.00013162276,0.000043103515,0.012466567,0.0019490458,0.0001692889,0.0000930436],"about_ca_topic_score_codex":0.013594374,"about_ca_topic_score_gemma":0.018296162,"teacher_disagreement_score":0.22648205,"about_ca_system_score_codex":0.000035213798,"about_ca_system_score_gemma":0.000008723179,"threshold_uncertainty_score":0.9996174},"labels":[],"label_agreement":null},{"id":"W4409271162","doi":"10.3390/v17040534","title":"Genomic and Epidemiological Investigations Reveal Chromosomal Integration of the Acipenserid Herpesvirus 3 Genome in Lake Sturgeon Acipenser fulvescens","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; Fisheries and Oceans Canada","funders":"Fisheries and Oceans Canada; University of California, Davis; U.S. Fish and Wildlife Service; Hospital for Sick Children; Manitoba Hydro; Vancouver Island University; Louisiana Department of Wildlife and Fisheries","keywords":"Biology; Acipenser; Genome; Monophyly; Lake sturgeon; Genetics; Sturgeon; Evolutionary biology; Zoology; Phylogenetic tree; Gene; Clade; Fishery","score_opus":0.024474682528749677,"score_gpt":0.265170434249713,"score_spread":0.2406957517209633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409271162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952199,0.0022461226,0.000021738435,0.0006872672,0.00025246516,0.00042064057,0.00014963716,0.0000300853,0.0009721375],"genre_scores_gemma":[0.9963155,0.00013890314,0.00007168868,0.0018448046,0.00001469337,0.00002622634,0.0000951279,0.0000065043355,0.0014865479],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988044,0.00030890628,0.00037130548,0.00027548824,0.000019610958,0.00022031108],"domain_scores_gemma":[0.9994578,0.00011429498,0.00012758626,0.0002525844,0.000032001753,0.000015753969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023105735,0.00017092284,0.00029349458,0.00010351268,0.00013968373,0.000012348379,0.00022061318,0.00018903862,0.00017440862],"category_scores_gemma":[0.00021540484,0.00011155864,0.00007955538,0.0002383695,0.0004238089,0.00007667047,0.0002220609,0.00024438064,0.00005160515],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007919642,0.0000714758,0.051410664,0.000024663981,0.00007430721,0.0000013614635,0.00025352387,0.000008477174,0.9403674,0.005110044,0.0021424787,0.00045640554],"study_design_scores_gemma":[0.0007331395,0.000043020726,0.86638236,0.000101376354,0.00008475164,0.00000485663,0.00029256888,0.0000024894769,0.06090791,0.000964986,0.0703273,0.0001552702],"about_ca_topic_score_codex":0.00007404562,"about_ca_topic_score_gemma":0.001185624,"teacher_disagreement_score":0.8794595,"about_ca_system_score_codex":0.000023524806,"about_ca_system_score_gemma":0.00004833912,"threshold_uncertainty_score":0.45492294},"labels":[],"label_agreement":null},{"id":"W4409511446","doi":"10.3390/v17040571","title":"Characterization of Nanobody Binding to Distinct Regions of the SARS-CoV-2 Spike Protein by Flow Virometry","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute of Infection and Immunity; University of Ottawa","funders":"National Research Council Canada; Canadian Institutes of Health Research; University of Ottawa","keywords":"Single-domain antibody; Avidity; Epitope; Antibody; Phage display; Epitope mapping; Glycoprotein; Protein subunit; Recombinant DNA; Biology; Virology; Computational biology; Monoclonal antibody; Flow cytometry; Molecular biology; Chemistry; Genetics; Gene","score_opus":0.0400331398398671,"score_gpt":0.34072797729926296,"score_spread":0.30069483745939585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409511446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99594563,0.00005934422,0.00028044308,0.001869669,0.00008729327,0.000512078,0.00029212414,0.000013247378,0.0009401744],"genre_scores_gemma":[0.99519193,0.000023641162,0.00018749369,0.00056932966,0.000037952963,0.00002620714,0.00003469746,0.000009773594,0.003918967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913454,0.00004660151,0.00024993267,0.00014717782,0.00027104942,0.0001506936],"domain_scores_gemma":[0.999515,0.000049438277,0.00007808026,0.00024360899,0.00008133723,0.000032552056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114576615,0.000092825336,0.00022194919,0.00017239703,0.0000747154,0.0000074188097,0.00015668516,0.000048843467,0.000033599972],"category_scores_gemma":[0.00020193991,0.000059311762,0.000081062986,0.0007255401,0.00010777928,0.000041509495,0.0001261854,0.000105036735,0.000017154469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018600565,0.00012015148,0.018119607,0.00020818949,0.00004321162,0.0000017918743,0.000050266703,1.2794092e-7,0.9775564,0.0005426818,0.0016482132,0.0015233473],"study_design_scores_gemma":[0.00019648683,0.000102352205,0.041985393,0.00045621314,0.000021296946,0.0000019427066,0.000012562206,0.00002369522,0.9168562,0.000033429347,0.040261254,0.00004913948],"about_ca_topic_score_codex":0.00023775709,"about_ca_topic_score_gemma":0.000017755125,"teacher_disagreement_score":0.060700174,"about_ca_system_score_codex":0.000023074215,"about_ca_system_score_gemma":0.000079429854,"threshold_uncertainty_score":0.24186635},"labels":[],"label_agreement":null},{"id":"W4409557985","doi":"10.3390/v17040576","title":"Transmission and Characterization of Creutzfeldt–Jakob Disease and Chronic Wasting Disease in the North American Deer Mouse","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; University of Manitoba; Public Health Agency of Canada","funders":"Health Canada; Public Health Agency; Public Health Agency of Canada; Canadian Food Inspection Agency","keywords":"Chronic wasting disease; Biology; Virology; Peromyscus; Incubation period; Prion protein; Incubation; Disease; Pathology; Scrapie; Medicine; Zoology; Biochemistry","score_opus":0.008470123701420093,"score_gpt":0.2523658472229485,"score_spread":0.24389572352152844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409557985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904371,0.00866312,0.000504933,0.00019060074,0.0000095651985,0.00013233734,0.000051349154,0.0000046094397,0.0000063885914],"genre_scores_gemma":[0.99040794,0.008996029,0.000030484212,0.00043163289,0.000032964756,0.000021230873,0.000055137472,0.0000060815228,0.000018502657],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99950486,0.000055997567,0.0001146886,0.00017157465,0.000056334786,0.000096527845],"domain_scores_gemma":[0.999713,0.000013804351,0.00004705238,0.00014007534,0.000014588717,0.00007144985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000570415,0.00007950022,0.000075716634,0.00003719707,0.000056414647,0.000020498373,0.00007447308,0.000015437223,0.0000030958643],"category_scores_gemma":[0.00004462825,0.00006067088,0.000023942737,0.000103545724,0.000079053396,0.0000068676886,0.00004552124,0.000034125587,1.3717587e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018419902,0.000043620585,0.4105853,0.00020519277,0.00001290539,0.0000021821224,0.000037035905,0.00002531115,0.5414036,0.000030118783,0.000011046794,0.047459457],"study_design_scores_gemma":[0.0003394092,0.000061698964,0.95927197,0.000121516045,0.000047977483,2.2694863e-7,0.000022853756,0.00046449745,0.03304648,0.000015540465,0.0064931326,0.0001146875],"about_ca_topic_score_codex":0.000014746749,"about_ca_topic_score_gemma":0.00002160131,"teacher_disagreement_score":0.5486867,"about_ca_system_score_codex":0.000004626135,"about_ca_system_score_gemma":0.00006214638,"threshold_uncertainty_score":0.24740867},"labels":[],"label_agreement":null},{"id":"W4410030161","doi":"10.3390/v17050652","title":"The Emerging Role of Circulating T Follicular Helper Cells in Dengue Virus Immunity: Balancing Protection and Pathogenesis","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Minority Health and Health Disparities; National Institute of General Medical Sciences; National Institutes of Health; Center for Retirement Research, Boston College; Canadian Dairy Commission; Centers for Disease Control and Prevention","keywords":"Dengue fever; Immunology; Flavivirus; Immune system; Dengue virus; Biology; Virology; Immunity; Vaccination; Zika virus; Disease; Virus; Medicine","score_opus":0.02088678457561338,"score_gpt":0.3000091213476961,"score_spread":0.2791223367720827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410030161","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008697933,0.98962355,0.000038193037,0.0000090888925,0.00010724421,0.0013874957,0.00004388733,0.000025982243,0.000066647364],"genre_scores_gemma":[0.009285818,0.9900854,0.000023715094,0.00006136225,0.000109726956,0.00035202212,0.000011830929,0.00003621367,0.000033906836],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99837583,0.0002693675,0.000610069,0.00029635878,0.00020169513,0.0002466965],"domain_scores_gemma":[0.9988991,0.0002541704,0.00029231416,0.00043402074,0.000060963714,0.000059433707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041186556,0.00027738913,0.0010619534,0.0002064279,0.00016740408,0.00003647087,0.00012165207,0.00016903934,0.00001270659],"category_scores_gemma":[0.00025862653,0.00019038968,0.00032593223,0.00039790611,0.000034525758,0.00004636722,0.000100361496,0.00027837983,0.0000030034907],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001974874,0.000046116547,0.0002014356,0.010557343,0.00017459583,0.00001771123,0.00006221457,0.0000044559433,0.008020296,0.000040949886,0.00000409029,0.98085105],"study_design_scores_gemma":[0.0010631382,0.00009981747,0.00097335427,0.05427559,0.0039236257,0.00003815555,0.00083806465,0.0005276939,0.0017237585,0.000062667474,0.93592775,0.0005463721],"about_ca_topic_score_codex":0.00091740914,"about_ca_topic_score_gemma":0.00008895571,"teacher_disagreement_score":0.98030466,"about_ca_system_score_codex":0.00006899278,"about_ca_system_score_gemma":0.0002469535,"threshold_uncertainty_score":0.7763866},"labels":[],"label_agreement":null},{"id":"W4410068451","doi":"10.3390/v17050666","title":"Impact of Vaccine-Elicited Anti-Spike IgG4 Antibodies on Fc-Effector Functions Against SARS-CoV-2","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Héma-Québec; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Canada Foundation for Innovation","keywords":"Effector; Vaccination; Antibody; Immunology; Messenger RNA; Neutralizing antibody; Virology; Medicine; Biology; Gene; Genetics","score_opus":0.05592788916019537,"score_gpt":0.403882320422207,"score_spread":0.34795443126201164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410068451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98710823,0.0007320681,0.00002620349,0.0006317922,0.00025680946,0.00044244117,0.00045577178,0.00009722228,0.010249476],"genre_scores_gemma":[0.9951281,0.00064835453,0.000059840186,0.0019030318,0.00018317744,0.000018229384,0.00013131458,0.000026012467,0.0019019176],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998391,0.00008227055,0.0003931286,0.00034440073,0.0003698652,0.00041937793],"domain_scores_gemma":[0.9988031,0.000352562,0.00009012327,0.00043730778,0.00022370978,0.0000932077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015720131,0.00028439212,0.0006065393,0.0006087208,0.00015851423,0.000028412596,0.00016459638,0.00011906176,0.0001645605],"category_scores_gemma":[0.00027832086,0.00019394346,0.00038509895,0.0007298199,0.00011900324,0.000096030875,0.00010398351,0.00031420536,0.0005196073],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014212638,0.00049699534,0.31156793,0.00021069394,0.0005123701,0.000035247773,0.00003934974,0.000023783356,0.6251726,0.00015827123,0.056478593,0.003882903],"study_design_scores_gemma":[0.0014572067,0.0014380425,0.74514025,0.0005175433,0.00010451144,0.000009723904,0.000027515103,0.0001999791,0.21243325,0.00002219144,0.038454976,0.00019482171],"about_ca_topic_score_codex":0.0010489915,"about_ca_topic_score_gemma":0.000056811925,"teacher_disagreement_score":0.43357232,"about_ca_system_score_codex":0.0000782513,"about_ca_system_score_gemma":0.00021234788,"threshold_uncertainty_score":0.7908785},"labels":[],"label_agreement":null},{"id":"W4410326242","doi":"10.3390/v17050696","title":"Genomic Diversity of Tomato Brown Rugose Fruit Virus in Canadian Greenhouse Production Systems","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Agriculture, Food and Rural Affairs; Brock University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Government of Canada","keywords":"ORFS; Biology; GenBank; Genetics; Phylogenetic tree; Gene; Genome; Open reading frame; Peptide sequence","score_opus":0.046845638984278154,"score_gpt":0.25539368754062386,"score_spread":0.2085480485563457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410326242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972618,0.00086573354,8.3271324e-8,0.00030234133,0.00018238707,0.0002782855,0.00048155396,0.00003420775,0.000593565],"genre_scores_gemma":[0.9991482,0.00031729194,0.0000029984533,0.00010763479,0.00005132606,0.000012477562,0.000009666696,4.6847694e-7,0.00034996448],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906456,0.00008221979,0.00016545846,0.00021744285,0.00015539673,0.0003148952],"domain_scores_gemma":[0.99966234,0.000095938776,0.00004332526,0.000060960298,0.000051360803,0.00008609751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002563067,0.00009231124,0.00017995376,0.000080834485,0.00026033598,0.000025850019,0.00026086546,0.00005740135,0.000039831342],"category_scores_gemma":[0.0001542032,0.000040994015,0.000033253953,0.00046977418,0.00007334559,0.0001153151,0.00023970453,0.000083357896,0.000037932332],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004165181,0.000051777395,0.2652158,0.000032292653,0.000030520478,0.000012290308,0.0001194109,0.000036834568,0.72575164,0.0001662762,0.0060335263,0.002507986],"study_design_scores_gemma":[0.00009837134,0.000052316875,0.9230129,0.0000803273,0.000009487556,0.0000017881139,0.00034325625,0.000033459917,0.03876796,0.00008006164,0.037381046,0.00013900969],"about_ca_topic_score_codex":0.85499567,"about_ca_topic_score_gemma":0.916045,"teacher_disagreement_score":0.68698364,"about_ca_system_score_codex":0.00015303332,"about_ca_system_score_gemma":0.000048396865,"threshold_uncertainty_score":0.20023201},"labels":[],"label_agreement":null},{"id":"W4410326279","doi":"10.3390/v17050689","title":"How HIV-1 Uses the Metabolite Inositol Hexakisphosphate to Build Its Capsid","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Medical Research Council Canada; Wellcome Trust","keywords":"Capsid; Metabolite; Inositol; Human immunodeficiency virus (HIV); Virology; Computational biology; Chemistry; Biology; Biochemistry; Virus; Receptor","score_opus":0.05537631459351763,"score_gpt":0.34983415739798646,"score_spread":0.29445784280446885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410326279","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00001718469,0.99270535,0.000009924242,0.0006643481,0.0008711522,0.0017481743,0.0032478038,0.000102983606,0.00063305744],"genre_scores_gemma":[0.000028302566,0.9565792,0.00002987936,0.0005950282,0.0000849926,0.00088024617,0.0005158228,0.000039513092,0.041246988],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974449,0.0007079244,0.00038988332,0.00061165885,0.0000863334,0.0007592793],"domain_scores_gemma":[0.9980487,0.0007810494,0.00015984497,0.00084069074,0.00009313488,0.00007658571],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019306391,0.00059078605,0.0015185961,0.0002930243,0.00038068998,0.00016614138,0.00090938143,0.00041105706,0.00034081689],"category_scores_gemma":[0.00035890337,0.0003231874,0.00049350475,0.00054843957,0.0001474466,0.00011190479,0.00045270612,0.0006024025,0.011284925],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046242436,0.00018396143,0.00004655749,0.0040456685,0.0028217845,0.00006091883,0.000091163936,1.8144735e-7,0.00018523129,0.0018897178,0.11349005,0.8771385],"study_design_scores_gemma":[0.00028272395,0.000076802666,0.000018596313,0.0024318981,0.0008843118,0.000030323119,0.00002053385,5.513801e-9,0.0025173444,0.0000067218552,0.9934428,0.000287951],"about_ca_topic_score_codex":0.00015601859,"about_ca_topic_score_gemma":0.000042505748,"teacher_disagreement_score":0.8799527,"about_ca_system_score_codex":0.00008614437,"about_ca_system_score_gemma":0.00051568006,"threshold_uncertainty_score":0.99992204},"labels":[],"label_agreement":null},{"id":"W4410519674","doi":"10.3390/v17050727","title":"HTLV-I Basic Leucine Zipper Factor (sHBZ) Actively Associates with Nucleophosmin (B23) in the Nucleolus","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Centre d’Excellence en Recherche sur les Maladies Orphelines – Fondation Courtois","keywords":"Nucleolus; Nucleophosmin; Biology; Retrovirus; Leucine zipper; HEK 293 cells; Molecular biology; Provirus; bZIP domain; Cell biology; Jurkat cells; Virology; Cell culture; T cell; Myeloid leukemia; Transcription factor; Cancer research; Virus; Gene; Genetics; Cytoplasm","score_opus":0.016084626397377476,"score_gpt":0.25020155445320374,"score_spread":0.23411692805582626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410519674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98458314,0.0049705505,0.0000060880866,0.001148386,0.00046451465,0.0002605694,0.000077223944,0.00008042483,0.008409111],"genre_scores_gemma":[0.9924627,0.0003393716,0.00001456183,0.0024898993,0.000030940686,0.00003427741,0.00000790082,0.000015947939,0.0046044183],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998801,0.00019907721,0.00022023529,0.0003148886,0.0000519129,0.00041287323],"domain_scores_gemma":[0.99918354,0.00040762805,0.00009172452,0.00026147373,0.00004542282,0.00001022925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014725329,0.0002383949,0.00034817812,0.00014542941,0.00034566337,0.000029525281,0.00033263967,0.00018758052,0.00030040822],"category_scores_gemma":[0.000094075964,0.00013247253,0.000075416436,0.00033724695,0.00030353936,0.00010386501,0.00011214561,0.00039557068,0.0004436325],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007432877,0.00062199077,0.28060868,0.00004456373,0.0009110442,0.000027988617,0.00511219,0.0000033391232,0.67526114,0.0026383467,0.025096998,0.008930441],"study_design_scores_gemma":[0.002561554,0.00034502416,0.5416059,0.00012827359,0.00010640879,0.000009125005,0.0038042075,5.9678945e-7,0.15753603,0.0002686634,0.29328278,0.00035146085],"about_ca_topic_score_codex":0.0012889549,"about_ca_topic_score_gemma":0.0012057648,"teacher_disagreement_score":0.5177251,"about_ca_system_score_codex":0.00006510835,"about_ca_system_score_gemma":0.000068090914,"threshold_uncertainty_score":0.5702146},"labels":[],"label_agreement":null},{"id":"W4410861837","doi":"10.3390/v17060761","title":"A Simplified mAb-Based Antigen Detection Assay for Rapid Serotyping of Foot-and-Mouth Disease Virus","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Monoclonal antibody; Virology; Polyclonal antibodies; Foot-and-mouth disease virus; Serotype; Antigen; Antibody; Biology; Foot-and-mouth disease; Virus; Immunology","score_opus":0.04731588920722731,"score_gpt":0.2841785574225032,"score_spread":0.23686266821527588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410861837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973351,0.00047431648,0.00079579017,0.00054768845,0.000079871905,0.0003799764,0.00010869293,0.00006449413,0.00021408524],"genre_scores_gemma":[0.9980029,0.000065135595,0.000048856607,0.001701119,0.00006272533,0.000053955802,0.000026571357,8.614883e-7,0.00003786323],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925846,0.00008999731,0.00018951656,0.00022834526,0.00005469392,0.00017900422],"domain_scores_gemma":[0.99935174,0.00042147792,0.000079385834,0.000045777044,0.00003584131,0.000065793596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025700976,0.00010226925,0.00017318879,0.000026852991,0.00015261417,0.000019353729,0.000104577586,0.00005118769,0.00007939106],"category_scores_gemma":[0.00027925934,0.000044893124,0.000095468014,0.00017465958,0.000058404687,0.00005999568,0.00004934752,0.000032991273,0.0000042970114],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018259675,0.0001722634,0.07280634,0.00021702847,0.00008908841,0.0000014776889,0.000013960957,0.00004383081,0.68909997,0.004118618,0.0012298686,0.23038156],"study_design_scores_gemma":[0.00038572837,0.00017981093,0.95039517,0.000062523766,0.00008426553,4.073949e-8,0.00009116693,0.0020140717,0.023487238,0.0033776404,0.019743856,0.00017848313],"about_ca_topic_score_codex":0.00021243878,"about_ca_topic_score_gemma":0.00019440828,"teacher_disagreement_score":0.8775888,"about_ca_system_score_codex":0.000009204677,"about_ca_system_score_gemma":0.000008711215,"threshold_uncertainty_score":0.18306886},"labels":[],"label_agreement":null},{"id":"W4410869056","doi":"10.3390/v17060770","title":"The Spread of Endogenous Retroviruses in Populations Infected by Exogenous Viruses","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Population; Fixation (population genetics); Virulence; Genome; Endogenous retrovirus; Genetics; DNA; Gene","score_opus":0.025561142890215598,"score_gpt":0.32123517188165596,"score_spread":0.29567402899144035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410869056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868761,0.010004583,0.0016203511,0.00003054326,0.00020949928,0.00018948344,0.000060757007,0.000020363006,0.0009883533],"genre_scores_gemma":[0.9986376,0.0007650615,0.00014881018,0.0002558707,0.00003622801,0.000026672706,0.00002057617,0.000014713239,0.00009444941],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991951,0.000043541226,0.00028163125,0.00018825856,0.00008133245,0.00021013596],"domain_scores_gemma":[0.9994693,0.000053075386,0.000054724245,0.00035122992,0.00004440461,0.000027275099],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000108399494,0.00012704021,0.00013630294,0.000071512055,0.000095726115,0.000019645186,0.00019630129,0.00009337543,0.000006906843],"category_scores_gemma":[0.00018556158,0.00010542237,0.000056712004,0.00022766329,0.0000744128,0.0000034193063,0.000085244144,0.000070383874,0.0000032781106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038427235,0.0000568154,0.058512546,0.0000142138515,0.000033866465,9.204608e-7,0.000031069478,0.00031722995,0.9373332,0.0002739975,0.0016604257,0.0017272681],"study_design_scores_gemma":[0.0002908407,0.00008614813,0.017070571,0.00002103832,0.00001774654,0.0000027418507,0.00005204533,0.000015139284,0.93012,0.00010701136,0.052099958,0.000116777024],"about_ca_topic_score_codex":0.00045156674,"about_ca_topic_score_gemma":0.0006968844,"teacher_disagreement_score":0.050439533,"about_ca_system_score_codex":0.000013447379,"about_ca_system_score_gemma":0.000061269115,"threshold_uncertainty_score":0.42989996},"labels":[],"label_agreement":null},{"id":"W4410869755","doi":"10.3390/v17060758","title":"Characterization of the Virome in Mosquitoes Across Distinct Habitats in the Yucatán Peninsula, Mexico","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México; Universidad Nacional Autónoma de México","keywords":"Human virome; Biology; Virus classification; Biodiversity; Ecology; Habitat; Metagenomics; Zoology; Genetics; Genome","score_opus":0.01572654471568249,"score_gpt":0.3113515384970814,"score_spread":0.29562499378139895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410869755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963084,0.0003886198,0.000017722208,0.002073082,0.0001761352,0.0005137061,0.00008343857,0.0000129630125,0.00042596957],"genre_scores_gemma":[0.99677545,0.000031823864,0.0000033880742,0.0028381792,0.00005474722,0.000086214364,0.00001686765,0.00000883622,0.00018452438],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900866,0.0001060264,0.00031018397,0.00018065868,0.00019835666,0.00019613074],"domain_scores_gemma":[0.9993175,0.000118890435,0.00008928429,0.0004148997,0.000035485784,0.000023927494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023249659,0.000112363654,0.00023053282,0.00006127931,0.00006026676,0.000027718426,0.00024238,0.00005236696,0.00003813363],"category_scores_gemma":[0.00024568965,0.00006222878,0.000087766115,0.00048522942,0.00009382737,0.00007953727,0.00007033344,0.00013166902,0.0000067957712],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000267314,0.0004048506,0.800987,0.00010362755,0.000023585784,0.000011806727,0.0011450415,0.000005144115,0.19230609,0.0011155648,0.0001081356,0.0035218585],"study_design_scores_gemma":[0.0010234605,0.00004105211,0.9886434,0.000205221,0.000040501694,0.0000014973962,0.00042707077,0.00018496756,0.0065150517,0.00016533434,0.0026950678,0.000057387435],"about_ca_topic_score_codex":0.00030409338,"about_ca_topic_score_gemma":0.000404331,"teacher_disagreement_score":0.1876564,"about_ca_system_score_codex":0.000032436164,"about_ca_system_score_gemma":0.00009003305,"threshold_uncertainty_score":0.2537616},"labels":[],"label_agreement":null},{"id":"W4410942673","doi":"10.3390/v17060802","title":"Progress in Pseudotyping Lentiviral Vectors Towards Cell-Specific Gene Delivery In Vivo","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Genetic enhancement; Ex vivo; Gene delivery; Viral vector; Tropism; Cell therapy; Biology; In vivo; Computational biology; Transgene; Cell biology; Stem cell; Gene; Immunology; Virus; Genetics; Recombinant DNA","score_opus":0.0489247756290354,"score_gpt":0.35251783805945286,"score_spread":0.30359306243041745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410942673","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0345221,0.9638354,0.0000043774285,0.000006571127,0.00025549522,0.00087263697,0.00013847846,0.000020352494,0.00034459823],"genre_scores_gemma":[0.0018690819,0.9967477,0.00009059173,0.00007787086,0.00025721724,0.00034476933,0.00014039583,0.00008461431,0.00038778607],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99705327,0.00048984686,0.00064407504,0.00089674024,0.00027149302,0.0006445942],"domain_scores_gemma":[0.9989323,0.000044817596,0.00016199965,0.0007258469,0.00005612783,0.00007888811],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004577583,0.0005297864,0.0009956992,0.0006484232,0.000055007524,0.00007013985,0.0007280878,0.0005586269,0.000079407335],"category_scores_gemma":[0.000029453306,0.0005050299,0.0003513607,0.0007271359,0.0001310824,0.000008299315,0.00039401493,0.00046112202,0.000040502953],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005985569,0.0003972929,0.0005340652,0.007026464,0.00015244796,0.00012159076,0.000041022107,0.0000100833095,0.011992572,0.0000074991767,0.0040717893,0.97504663],"study_design_scores_gemma":[0.0005634003,0.00047753897,0.000027968765,0.0033680114,0.000042840762,0.0000048114857,0.000011973672,0.0000013989752,0.06452318,0.0000052233813,0.93037814,0.0005954843],"about_ca_topic_score_codex":0.000059553568,"about_ca_topic_score_gemma":0.00033822708,"teacher_disagreement_score":0.9744511,"about_ca_system_score_codex":0.00018737915,"about_ca_system_score_gemma":0.0009443528,"threshold_uncertainty_score":0.9997401},"labels":[],"label_agreement":null},{"id":"W4411153933","doi":"10.3390/v17060827","title":"Myricetin Restricts the Syncytial Development Triggered by Nipah Virus Envelope Glycoproteins In Vitro","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Science and Engineering Research Board; Department of Science and Technology, Ministry of Science and Technology, India","keywords":"Glycoprotein; Virology; In vitro; Envelope (radar); Biology; Viral envelope; Virus; Cell biology; Genetics; Computer science","score_opus":0.019129506354983592,"score_gpt":0.29201911741752173,"score_spread":0.2728896110625381,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411153933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893321,0.004439272,0.00007169678,0.0019468843,0.00021278314,0.0007221687,0.000047569556,0.00010071434,0.0031268026],"genre_scores_gemma":[0.98900104,0.00027427383,0.00029079826,0.00838384,0.00006667333,0.00017470786,0.000042156902,0.000015694835,0.0017508105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986063,0.00013835181,0.00038699564,0.00031550202,0.0002036038,0.00034920778],"domain_scores_gemma":[0.9993325,0.00016747431,0.00006979559,0.00031056523,0.00003172282,0.00008794364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023203857,0.00019987319,0.00032006082,0.00019098265,0.0001806768,0.00002235888,0.00020776024,0.00015662002,0.00015161985],"category_scores_gemma":[0.00043539453,0.00013623408,0.00006416286,0.00052188075,0.00013083304,0.00007459888,0.00009688606,0.0002932722,0.00020946104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01250035,0.0019493736,0.019854361,0.00023212234,0.0004782706,0.0003459109,0.00074158143,0.000005342508,0.7609055,0.00061085547,0.12270473,0.07967159],"study_design_scores_gemma":[0.003016165,0.00012916279,0.1556211,0.00015065455,0.00012446627,0.0000063012762,0.000111553556,0.000013537882,0.5131355,0.00017314505,0.32729906,0.00021935221],"about_ca_topic_score_codex":0.0003852226,"about_ca_topic_score_gemma":0.00006900733,"teacher_disagreement_score":0.24777,"about_ca_system_score_codex":0.00009166722,"about_ca_system_score_gemma":0.0006005271,"threshold_uncertainty_score":0.55554646},"labels":[],"label_agreement":null},{"id":"W4411339184","doi":"10.3390/v17060848","title":"Humoral and Cellular Immune Responses to SARS-CoV-2 in Participants with Head and Neck Cancer","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Head and neck cancer; Immune system; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Cancer; Medicine; Head and neck; Immunology; Virology; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Biology; Pathology; Internal medicine; Disease; Surgery; Infectious disease (medical specialty); Outbreak","score_opus":0.10786466219311129,"score_gpt":0.4182869619557268,"score_spread":0.3104222997626155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411339184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933643,0.0049888734,0.000009803466,0.0007739548,0.00004218094,0.00038990556,0.000009712924,0.00003456785,0.00038671956],"genre_scores_gemma":[0.95586616,0.000031380165,0.00009586376,0.04378244,0.000031053092,0.0001001035,3.402317e-7,0.00001604077,0.0000766488],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885905,0.00006384741,0.00019672993,0.00030762798,0.00018903785,0.00038371468],"domain_scores_gemma":[0.9995287,0.00011689855,0.000022234884,0.00024601494,0.00004878198,0.00003734342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002215681,0.0001428733,0.00031122094,0.00028947124,0.000063655214,0.00004459252,0.00007246279,0.00005860541,0.000004941553],"category_scores_gemma":[0.00017659535,0.000110243855,0.000018243674,0.00045507803,0.00013523147,0.000081521124,0.000102314814,0.00015914989,0.00001285684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023430218,0.000064457985,0.4767457,0.0000780075,0.000030345183,0.00011600667,0.00032539945,1.488429e-7,0.51858455,0.00005259399,0.00016942459,0.0014903424],"study_design_scores_gemma":[0.0017749195,0.0003451235,0.22355248,0.00042117256,0.00003140682,0.000004564642,0.00013952274,0.000028420334,0.7318059,0.000046208377,0.04174367,0.00010656335],"about_ca_topic_score_codex":0.0052727605,"about_ca_topic_score_gemma":0.0026497084,"teacher_disagreement_score":0.25319323,"about_ca_system_score_codex":0.00005876294,"about_ca_system_score_gemma":0.0002878647,"threshold_uncertainty_score":0.7970872},"labels":[],"label_agreement":null},{"id":"W4411339190","doi":"10.3390/v17060851","title":"The Effect on Mortality of Bacterial Co-Infections on Critically Ill Patients with Community-Acquired COVID-19 and Influenza Pneumonia: A Systematic Review","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Critically ill; Pneumonia; Coronavirus disease 2019 (COVID-19); Medicine; Community-acquired pneumonia; Intensive care medicine; 2019-20 coronavirus outbreak; Immunology; Virology; Internal medicine; Infectious disease (medical specialty); Disease; Outbreak","score_opus":0.061963216595677106,"score_gpt":0.4082376405304912,"score_spread":0.3462744239348141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411339190","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0061072176,0.98228866,0.000004183451,0.000108170905,0.000387984,0.00948923,0.0007660974,0.00014553827,0.00070294744],"genre_scores_gemma":[0.00034728806,0.98609596,9.845683e-7,0.012025136,0.00005167843,0.0012968583,0.000109599256,0.000046818895,0.000025694577],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99489665,0.0030623048,0.0010837083,0.00030004518,0.00040169674,0.00025560494],"domain_scores_gemma":[0.99158174,0.006016373,0.00052804075,0.0012299039,0.00039394494,0.00025002574],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010151839,0.0005294866,0.0030259432,0.00023852268,0.0007597542,0.000052271018,0.00021491424,0.00024350345,0.000018962515],"category_scores_gemma":[0.011120014,0.00026433542,0.0004067687,0.00045933478,0.00041179807,0.00005384308,0.00007577082,0.0006356907,0.000027113028],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055535005,0.0004351217,0.0012483401,0.9947797,0.00090522884,0.000007903564,0.000019860616,1.7693154e-7,0.0000063766674,0.00008313653,0.00021942222,0.0022391968],"study_design_scores_gemma":[0.0008672633,0.004165959,0.00052279944,0.6462894,0.010013578,0.000031677806,0.000008563989,7.944982e-8,0.0000042611537,0.0000036553008,0.33783513,0.00025759192],"about_ca_topic_score_codex":0.00006864213,"about_ca_topic_score_gemma":0.00004597171,"teacher_disagreement_score":0.34849027,"about_ca_system_score_codex":0.00021233021,"about_ca_system_score_gemma":0.0005698298,"threshold_uncertainty_score":0.99998087},"labels":[],"label_agreement":null},{"id":"W4411367004","doi":"10.3390/v17060860","title":"Surveillance of Respiratory Pathogens Among Rapid Diagnostic Test-Negative Acute Respiratory Infection Patients in Myanmar in 2023, with a Focus on Rhinovirus and Enterovirus Genotyping","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Respiratory viral infections research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"International Development Research Centre; Japan Agency for Medical Research and Development","keywords":"Rhinovirus; Respiratory system; Enterovirus; Genotyping; Medicine; Virology; Immunology; Internal medicine; Biology; Genotype; Virus","score_opus":0.026657210554756682,"score_gpt":0.3194765604899381,"score_spread":0.29281934993518144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411367004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966132,0.00057542714,0.000034614826,0.00002357633,0.00009746789,0.0012803698,0.00009460082,0.000049623202,0.0012310967],"genre_scores_gemma":[0.998355,0.00028495453,0.00005588364,0.0009859864,0.00003736711,0.00021713022,0.000002426779,0.000038287984,0.000022970076],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99737436,0.00048913725,0.0007008252,0.0005926449,0.00041962267,0.00042342045],"domain_scores_gemma":[0.9960237,0.002910806,0.00021784993,0.00048609715,0.0002489406,0.00011258519],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007134275,0.0003118446,0.000586194,0.0016699788,0.00010166698,0.000036856625,0.000110016714,0.00019332394,0.000029504956],"category_scores_gemma":[0.0068610637,0.00027413905,0.00006082978,0.0016684475,0.00036950168,0.00029819345,0.000120803685,0.0005998949,0.000019283423],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096998026,0.0006852033,0.969884,0.00015474996,0.00008495455,0.000100777965,0.000146601,0.00003669438,0.016390165,0.000049129387,0.00008754064,0.011410236],"study_design_scores_gemma":[0.0034147224,0.0024693196,0.9561395,0.00091832737,0.000033071832,0.0000012334302,0.000030415558,0.000019461095,0.03598047,0.0001065511,0.0006823424,0.00020457552],"about_ca_topic_score_codex":0.0022251867,"about_ca_topic_score_gemma":0.0052282214,"teacher_disagreement_score":0.019590307,"about_ca_system_score_codex":0.0003907406,"about_ca_system_score_gemma":0.000279318,"threshold_uncertainty_score":0.9999711},"labels":[],"label_agreement":null},{"id":"W4411605888","doi":"10.3390/v17070877","title":"Assessment and Performance of Pooled Serum Samples for Monitoring Farm-Level Immunity in Tilapia Infected with Tilapia Lake Virus","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"Kasetsart University Research and Development Institute; Kasetsart University","keywords":"Biology; Tilapia; Antibody; Population; Virus; Veterinary medicine; Virology; Immunity; Immunology; Immune system; Medicine; Fishery; Fish <Actinopterygii>","score_opus":0.026903464953617236,"score_gpt":0.28854234690936675,"score_spread":0.2616388819557495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411605888","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99727696,0.0011605792,0.00016040502,0.000028139273,0.00018633073,0.00046559094,0.00029739886,0.000044796587,0.00037976875],"genre_scores_gemma":[0.9983648,0.00025628117,0.00036427795,0.000104059734,0.000009751889,0.00005749317,0.00010967956,0.000011705382,0.00072196155],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99918336,0.00006835437,0.00024789083,0.00022353814,0.00002399323,0.00025285734],"domain_scores_gemma":[0.9994944,0.00011086188,0.00010207427,0.0002080281,0.00007223205,0.0000124204835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001591759,0.00018606006,0.000293075,0.00018613787,0.00014071047,0.000018981867,0.00015521649,0.00011886454,0.00005451957],"category_scores_gemma":[0.000024299148,0.00014974846,0.00003956092,0.00021257074,0.0001346459,0.00010643098,0.00012970013,0.00016207977,0.0000053464923],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004214184,0.00015956341,0.49470443,0.00018325551,0.00027530588,6.6187994e-7,0.00013213442,0.0000058980927,0.49811897,0.0006499861,0.00018640417,0.0051619923],"study_design_scores_gemma":[0.0018894435,0.00017493457,0.79817855,0.00020953408,0.0001272795,0.0000010504142,0.00025482854,0.000003887034,0.18927665,0.000021464464,0.009709897,0.00015245989],"about_ca_topic_score_codex":0.00020080316,"about_ca_topic_score_gemma":0.0008193224,"teacher_disagreement_score":0.3088423,"about_ca_system_score_codex":0.000029477605,"about_ca_system_score_gemma":0.00007249632,"threshold_uncertainty_score":0.6106565},"labels":[],"label_agreement":null},{"id":"W4411961443","doi":"10.3390/v17070941","title":"In Silico Analysis of Mechanisms of Maribavir-Induced Inhibition and Drug Resistance Mutations in pUL97 Kinase Structural Prediction with AlphaFold2","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Université Laval","keywords":"Kinase; Phosphorylation; Biology; Docking (animal); Drug resistance; Polymerase; Biochemistry; Enzyme; Cell biology; Virology; Chemistry; Microbiology","score_opus":0.018597620484780267,"score_gpt":0.3152946813200693,"score_spread":0.2966970608352891,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411961443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986212,0.00020174716,0.00009807087,0.0003078482,0.000017929719,0.00032246084,0.0000995771,0.000010465562,0.0003206976],"genre_scores_gemma":[0.999202,0.00005252366,0.0003316076,0.00011908309,0.000006127558,0.00002761308,0.000036472582,0.0000072929306,0.00021723694],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99895096,0.00006818211,0.0003704317,0.00021887003,0.00024909666,0.00014246634],"domain_scores_gemma":[0.99947804,0.00010535892,0.00008697451,0.0001855984,0.00010258178,0.000041451814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023951352,0.00009784203,0.00037228662,0.001307302,0.000032693715,0.000010796894,0.000038086797,0.00006340553,0.000067595],"category_scores_gemma":[0.00008386999,0.00008326598,0.000043256212,0.0021056384,0.00008148395,0.0001754064,0.000029272423,0.0001523182,3.9608238e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020741657,0.00026593538,0.1784763,0.00037255915,0.00043824533,0.000051191008,0.0010250804,0.0001874341,0.80668795,0.00759695,0.0000938103,0.002730359],"study_design_scores_gemma":[0.0025881378,0.00014223774,0.61277586,0.00040733148,0.00045715066,0.0000014316105,0.0007124619,0.0020079976,0.37885788,0.0018355532,0.0001134997,0.000100460675],"about_ca_topic_score_codex":0.002873122,"about_ca_topic_score_gemma":0.018377416,"teacher_disagreement_score":0.43429956,"about_ca_system_score_codex":0.0000865078,"about_ca_system_score_gemma":0.00011941212,"threshold_uncertainty_score":0.99953467},"labels":[],"label_agreement":null},{"id":"W4411961465","doi":"10.3390/v17070894","title":"The Association Between HIV Infection and Carotid Intima-Media Thickness in the Era of Antiretroviral Therapy: A Meta-Analysis","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"HIV-related health complications and treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meta-analysis; Medicine; Intima-media thickness; Confidence interval; Antiretroviral therapy; Internal medicine; Scopus; Human immunodeficiency virus (HIV); Population; Subgroup analysis; MEDLINE; Viral load; Carotid arteries; Immunology","score_opus":0.10304666358513566,"score_gpt":0.39711038888570305,"score_spread":0.2940637253005674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411961465","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010411793,0.9966702,0.000017781622,0.00043930634,0.00004601086,0.0012617353,0.00020309917,0.000019379515,0.00030132532],"genre_scores_gemma":[0.0056320815,0.99340266,0.00003115887,0.00014975142,0.00005475956,0.00035835514,0.00021893361,0.000013536926,0.00013875365],"study_design_codex":"design_other","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9978241,0.00072207354,0.0007087627,0.00025986886,0.00030669846,0.00017853556],"domain_scores_gemma":[0.9959874,0.0027669284,0.00060537143,0.00048770552,0.00011894689,0.000033634362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010456727,0.00023846053,0.0019521399,0.00034784822,0.0001943833,0.00003874807,0.00013285186,0.00026692648,0.00001618524],"category_scores_gemma":[0.00031343728,0.000110420944,0.00078661146,0.0017405532,0.00005245935,0.00005094735,0.000032835145,0.00060112274,0.000012700218],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016943875,0.0002702992,0.33737752,0.0040965523,0.11882216,0.0000025587415,0.00077686843,0.0000012581592,2.8243514e-7,0.00042900932,0.0005178153,0.53768873],"study_design_scores_gemma":[0.0006370625,0.00017483746,0.12039472,0.0012814061,0.47877637,0.0000040017435,0.00003666042,0.0000034020065,0.0000019821905,0.00009424226,0.39839593,0.00019936537],"about_ca_topic_score_codex":0.0009797586,"about_ca_topic_score_gemma":0.00020051248,"teacher_disagreement_score":0.53748935,"about_ca_system_score_codex":0.00015238173,"about_ca_system_score_gemma":0.00027941325,"threshold_uncertainty_score":0.45028356},"labels":[],"label_agreement":null},{"id":"W4412202151","doi":"10.3390/v17070970","title":"Molecular Detection of Various Non-Seasonal, Zoonotic Influenza Viruses Using BioFire FilmArray and GenXpert Diagnostic Platforms","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Saskatchewan; Canadian Food Inspection Agency; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Influenza A virus subtype H5N1; Preparedness; Pandemic; Outbreak; Virology; Epidemiology; Highly pathogenic; Clade; Coronavirus disease 2019 (COVID-19); Virus; Biology; Veterinary medicine; Medicine; Phylogenetic tree; Disease; Infectious disease (medical specialty); Gene; Internal medicine","score_opus":0.06412318366279578,"score_gpt":0.3699415323996259,"score_spread":0.3058183487368301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412202151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98852104,0.009048787,0.0010592384,0.000037013226,0.00014588427,0.00073404773,0.00003264659,0.00007467514,0.00034669533],"genre_scores_gemma":[0.9951609,0.00062341604,0.0005928645,0.0034378958,0.00005713463,0.00006784735,0.0000017927517,0.000035497407,0.0000226841],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982532,0.00003570387,0.00046570424,0.00038624063,0.00042255162,0.0004365963],"domain_scores_gemma":[0.99850607,0.0006104275,0.0001229968,0.0003932063,0.00022878079,0.00013854673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022488425,0.00028979275,0.0005371624,0.00046487246,0.00023442467,0.00004065388,0.0001276892,0.00016526725,0.00003440159],"category_scores_gemma":[0.0024104393,0.00024010154,0.000112671805,0.00060576655,0.0003786246,0.00022639277,0.00022122102,0.00027242216,0.000020115724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059803727,0.00018134851,0.13253231,0.00072181725,0.0005701061,0.000085601205,0.00036183692,0.00024800847,0.85702425,0.00015787841,0.00011593938,0.007402831],"study_design_scores_gemma":[0.0028716503,0.00049576483,0.104349874,0.0010417446,0.00045174384,0.000029775083,0.00031597356,0.0022781407,0.8811404,0.00040810465,0.00624296,0.00037385194],"about_ca_topic_score_codex":0.0010335328,"about_ca_topic_score_gemma":0.00005529442,"teacher_disagreement_score":0.028182445,"about_ca_system_score_codex":0.00014757295,"about_ca_system_score_gemma":0.00022650315,"threshold_uncertainty_score":0.97910565},"labels":[],"label_agreement":null},{"id":"W4412513605","doi":"10.3390/v17071017","title":"Regulation of Bombyx mori–BmNPV Protein Interactions: Study Strategies and Molecular Mechanisms","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Earmarked Fund for China Agriculture Research System","keywords":"Bombyx mori; Computational biology; Cell biology; Biology; Chemistry; Genetics; Gene","score_opus":0.02675002636288373,"score_gpt":0.3524298221265234,"score_spread":0.3256797957636397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412513605","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003390447,0.99297965,0.001541382,0.0000030736312,0.00022266201,0.0013265234,0.000076697106,0.000021596887,0.00043798127],"genre_scores_gemma":[0.032702673,0.96587014,0.00018593819,0.000045815897,0.000099026896,0.0005226542,0.0001194516,0.000038920614,0.00041535724],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986704,0.00020871818,0.00042299207,0.00043544907,0.00012842288,0.0001340297],"domain_scores_gemma":[0.99911517,0.000020793166,0.0002963685,0.00043645053,0.00008218564,0.000049025664],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009454758,0.00029637342,0.0005589711,0.00014435829,0.00007612259,0.00007460757,0.0001527863,0.00018542403,0.000031935037],"category_scores_gemma":[0.00008036303,0.00025008246,0.00020411878,0.00014985849,0.000046513924,0.000013986621,0.00019564672,0.00011285453,0.0000031948643],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017861271,0.0021320463,0.000025965439,0.030354206,0.0020985673,0.000021215057,0.000096904834,0.00006476243,0.3542915,0.0088166,0.0032066335,0.598713],"study_design_scores_gemma":[0.0006717773,0.0017501304,0.00003603824,0.011366524,0.0013226374,0.000018720122,0.0005016169,0.000003623178,0.059758626,0.004845438,0.91879636,0.00092853536],"about_ca_topic_score_codex":0.00006394667,"about_ca_topic_score_gemma":0.000016859178,"teacher_disagreement_score":0.9155897,"about_ca_system_score_codex":0.000012590848,"about_ca_system_score_gemma":0.00025339358,"threshold_uncertainty_score":0.9999951},"labels":[],"label_agreement":null},{"id":"W4412530942","doi":"10.3390/v17071021","title":"Development of a Point-of-Care Immunochromatographic Lateral Flow Strip Assay for the Detection of Nipah and Hendra Viruses","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; Canadian Food Inspection Agency","funders":"","keywords":"Hendra Virus; Virology; Monoclonal antibody; Biology; Virus; Hepatitis E virus; Antibody; Microbiology; Immunology; Genotype","score_opus":0.021889821875416396,"score_gpt":0.2990872636766336,"score_spread":0.2771974418012172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412530942","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889812,0.009013704,0.0013351552,0.00004434656,0.00011307759,0.00037040125,0.0000667072,0.000019394649,0.00005602168],"genre_scores_gemma":[0.9985483,0.00015657755,0.0009485284,0.00026456133,0.00001258299,0.000042259257,0.000006927998,0.000007161093,0.000013066964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993491,0.00003783493,0.0003048999,0.00011776468,0.000086361484,0.00010401792],"domain_scores_gemma":[0.999421,0.00019102306,0.00010745124,0.00016365042,0.000095373594,0.00002151807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013292626,0.00009786156,0.00025974034,0.00014932797,0.000086439264,0.000003741875,0.00006490545,0.00007445314,0.000016197993],"category_scores_gemma":[0.00013379287,0.000066320106,0.000089579735,0.00016533503,0.0001807031,0.000055883742,0.000040148523,0.000057985486,5.5956764e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0041176057,0.00033235503,0.122471064,0.0022628228,0.001152302,0.000002055802,0.002003996,0.000008437498,0.7959654,0.00071567047,0.00015324583,0.07081506],"study_design_scores_gemma":[0.0015777386,0.00039791304,0.37336162,0.00036539088,0.0003795982,0.0000026738446,0.00086485274,0.00010092512,0.61958355,0.00020931984,0.0030778772,0.00007855679],"about_ca_topic_score_codex":0.000042146632,"about_ca_topic_score_gemma":0.00007853559,"teacher_disagreement_score":0.25089055,"about_ca_system_score_codex":0.000008777197,"about_ca_system_score_gemma":0.00010034283,"threshold_uncertainty_score":0.27044556},"labels":[],"label_agreement":null},{"id":"W4412573400","doi":"10.3390/v17081024","title":"Assessment of Mammalian Scavenger and Wild White-Tailed Deer Activity at White-Tailed Deer Farms","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Wildlife Ecology and Conservation","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus","funders":"Animal and Plant Health Inspection Service; National Institute of Food and Agriculture; U.S. Department of Agriculture","keywords":"Odocoileus; Chronic wasting disease; Wildlife; Biology; Rodent; Veterinary medicine; Scavenger; Animal science; Ungulate; Ecology; Zoology; Habitat; Prion protein; Medicine; Disease","score_opus":0.013027392351927838,"score_gpt":0.2646423225887904,"score_spread":0.25161493023686254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412573400","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896648,0.000029937348,0.0003259615,0.0009894841,0.00018169242,0.00024198442,0.000013611492,0.000036849426,0.008515696],"genre_scores_gemma":[0.9937771,0.000018788758,0.00066763815,0.0018071784,0.000018008028,0.000045995097,0.0000048648303,0.00001027311,0.0036501382],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99887794,0.00011783501,0.00021594141,0.00035236453,0.00019522179,0.00024071001],"domain_scores_gemma":[0.9994283,0.00010265167,0.000105781415,0.00028460487,0.00001375907,0.00006494225],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028051276,0.00016323246,0.00022282712,0.00006374619,0.00018821757,0.0000220826,0.00015955359,0.00014559619,0.0027325137],"category_scores_gemma":[0.00005045907,0.00014745587,0.000049245333,0.000248039,0.00024429118,0.0003005376,0.00028200273,0.00013603244,0.00009340205],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005179351,0.000112746246,0.9798956,0.00001635662,0.00003125847,0.000002698001,0.000080247744,0.00016243517,0.015106089,0.00011946348,0.003250587,0.0011707288],"study_design_scores_gemma":[0.00046084472,0.00005452632,0.9911179,0.000018768664,0.000042668187,0.0000013823145,0.000037104757,0.00036091413,0.0036455875,0.00013408954,0.003979756,0.00014645349],"about_ca_topic_score_codex":0.000088672066,"about_ca_topic_score_gemma":0.0016138316,"teacher_disagreement_score":0.011460502,"about_ca_system_score_codex":0.00016848896,"about_ca_system_score_gemma":0.000030333078,"threshold_uncertainty_score":0.99817914},"labels":[],"label_agreement":null},{"id":"W4412784893","doi":"10.3390/v17071009","title":"Overexpression of Interleukin-17 Modulates Responses to Marek’s Disease Virus Infection and Tumor Formation in Chickens","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Veterinary College, University of Guelph; Ontario Agri-Food Innovation Alliance; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"Marek's disease; Virus; Virology; Interleukin 1β; Biology; Disease; Interleukin; Immunology; Medicine; Cytokine; Pathology","score_opus":0.02049150308550136,"score_gpt":0.322032565002902,"score_spread":0.30154106191740065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412784893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99836326,0.00015440435,0.00015558199,0.00011458363,0.0000724629,0.0003690156,0.00004428685,0.0000403754,0.0006860495],"genre_scores_gemma":[0.99888504,0.00011622673,0.0001209633,0.0005325407,0.000015264519,0.00005236094,0.000008974823,0.000007909094,0.00026070653],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99936754,0.000048966536,0.00023370565,0.00015370216,0.00008648027,0.000109633824],"domain_scores_gemma":[0.99958324,0.00007172845,0.000050213992,0.00017211535,0.000041634485,0.00008106279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007588081,0.000104529645,0.00017322306,0.00044405827,0.00005318247,0.000015266625,0.000020998184,0.000036564394,0.000049083952],"category_scores_gemma":[0.00022567138,0.000086223765,0.000036141646,0.00026494302,0.000029783656,0.0001869788,0.00004988219,0.000068536094,0.000011445762],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028480059,0.00073144597,0.8727329,0.00030270778,0.00006629425,0.00003156124,0.00036670273,0.00007095837,0.101120345,0.00029381862,0.001142519,0.020292776],"study_design_scores_gemma":[0.0011363353,0.00018591521,0.8733745,0.0011601843,0.00005535405,0.000007197336,0.00002828999,0.00023570708,0.115693964,0.0003514443,0.0076902113,0.00008090255],"about_ca_topic_score_codex":0.001223271,"about_ca_topic_score_gemma":0.00029754156,"teacher_disagreement_score":0.020211874,"about_ca_system_score_codex":0.00008954411,"about_ca_system_score_gemma":0.00004342512,"threshold_uncertainty_score":0.3516103},"labels":[],"label_agreement":null},{"id":"W4412785798","doi":"10.3390/v17071013","title":"Maternal Obesity Modifies the Impact of Active SARS-CoV-2 Infection on Placental Pathology","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 Impact on Reproduction","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fundação para a Ciência e a Tecnologia; Centre hospitalier universitaire Sainte-Justine","keywords":"Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Obesity; 2019-20 coronavirus outbreak; Immunology; Biology; Physiology; Pathology; Virology; Infectious disease (medical specialty); Disease; Outbreak","score_opus":0.054300900460584674,"score_gpt":0.4050623241018711,"score_spread":0.35076142364128643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412785798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99766845,0.000029219551,0.00008459849,0.00050765765,0.00030390776,0.00031524576,0.00001890211,0.00006391887,0.0010080854],"genre_scores_gemma":[0.9987369,0.00004498416,0.000008395769,0.0009975713,0.00009609522,0.0000103015955,0.0000032143307,0.000008587551,0.00009391715],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99929225,0.00008611075,0.00015696298,0.00019564934,0.0001284031,0.00014061245],"domain_scores_gemma":[0.99939597,0.00010214828,0.00009551581,0.00032627973,0.000061741885,0.000018340486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014901915,0.00011960781,0.00020225793,0.00017983369,0.000068522255,0.000010811205,0.00005143416,0.00007099741,0.000040515573],"category_scores_gemma":[0.00034588034,0.00007406281,0.00011806914,0.00020441657,0.00011273745,0.00009390051,0.00004079233,0.0001720266,0.00003958981],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001682505,0.00032644,0.39335814,0.00004653052,0.00013965809,0.000009037242,0.00027577538,0.00011501439,0.5977291,0.0001734709,0.0013932153,0.0047511184],"study_design_scores_gemma":[0.00037137416,0.0002829436,0.5419257,0.00003927092,0.000034462257,0.000024503235,0.000021509086,0.00003336509,0.45687792,0.00016252922,0.00019562728,0.000030730193],"about_ca_topic_score_codex":0.0066942084,"about_ca_topic_score_gemma":0.0000774262,"teacher_disagreement_score":0.1485676,"about_ca_system_score_codex":0.0002734771,"about_ca_system_score_gemma":0.00013504356,"threshold_uncertainty_score":0.9999203},"labels":[],"label_agreement":null},{"id":"W4412943053","doi":"10.3390/v17081079","title":"A Virome Scanning of Saffron (Crocus sativus L.) at the National Scale in Iran Using High-Throughput Sequencing Technologies","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Université de Liège; University of Tehran; Iran National Science Foundation; Fonds De La Recherche Scientifique - FNRS; National Science Foundation","keywords":"Crocus sativus; Biology; Human virome; Potyvirus; Corm; Crocus; Potyviridae; Turnip mosaic virus; Botany; Virology; Plant virus; Genetics; Virus; Metagenomics","score_opus":0.10321496825576136,"score_gpt":0.3233002434087008,"score_spread":0.2200852751529394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412943053","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967905,0.0011637816,0.0000029359717,0.00093047734,0.00004266905,0.00016851247,0.00017630705,0.00006650373,0.0006582557],"genre_scores_gemma":[0.9993718,0.00017267861,0.00014797098,0.00016109184,0.000024668274,0.000017971666,0.0000043850114,6.703681e-7,0.00009876565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890155,0.00007638807,0.00022040665,0.00022610324,0.00031397343,0.00026156133],"domain_scores_gemma":[0.9993354,0.00047638925,0.00007804963,0.000046443864,0.000051377392,0.000012320808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031955645,0.000112304384,0.00018925212,0.000057808844,0.00032136493,0.000030943218,0.00029295965,0.00007227796,0.000037383397],"category_scores_gemma":[0.0003372529,0.000039565006,0.00004141608,0.0007765289,0.00032091653,0.00013828841,0.00040580338,0.00013466924,0.000008200928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027799477,0.000018186838,0.015916426,0.000010094299,0.00001690872,0.0000017741241,0.00010017322,0.00016668135,0.97975916,0.00023533235,0.00038283374,0.003364605],"study_design_scores_gemma":[0.00024670467,0.000096807526,0.23364575,0.00031235977,0.000012307107,0.0000053346703,0.0027674001,0.00035839377,0.7533371,0.004138332,0.0048529925,0.00022653822],"about_ca_topic_score_codex":0.00369446,"about_ca_topic_score_gemma":0.0065178075,"teacher_disagreement_score":0.2264221,"about_ca_system_score_codex":0.0002585931,"about_ca_system_score_gemma":0.00002561168,"threshold_uncertainty_score":0.5584943},"labels":[],"label_agreement":null},{"id":"W4413129176","doi":"10.3390/v17081114","title":"The Differences in the Evolutionary Dynamics of MERS and SARS Coronaviruses","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Natural Science Foundation of China","keywords":"Middle East respiratory syndrome coronavirus; Biology; Phylogenetic tree; Clade; Transmission (telecommunications); Evolutionary biology; Evolutionary dynamics; Zoology; Middle East respiratory syndrome; Dipeptidyl peptidase-4; Outbreak; Phylogenetics; Coronavirus; Livestock; Disease; Virology; Coronavirus disease 2019 (COVID-19); Genetics; Gene; Ecology; Infectious disease (medical specialty); Medicine; Population; Environmental health","score_opus":0.05999190549229983,"score_gpt":0.3695057003009645,"score_spread":0.3095137948086647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413129176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918706,0.004047187,0.0000143107645,0.0010926594,0.000063381995,0.00020711377,0.000013677044,0.000011154817,0.0026799222],"genre_scores_gemma":[0.9813914,0.00018111125,0.000016897662,0.018333524,0.000015637383,0.00002409073,5.8211407e-7,0.000004006735,0.00003275927],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992674,0.000083388586,0.00015448684,0.00011809605,0.00022987039,0.00014675074],"domain_scores_gemma":[0.9989411,0.00077492464,0.000029200468,0.0002077722,0.00003982562,0.000007152905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024310737,0.000072766605,0.00013568402,0.00009039754,0.00010543499,0.000018822391,0.00017885628,0.000034937842,0.000002207115],"category_scores_gemma":[0.00023546958,0.00003692786,0.0000315079,0.00027759536,0.0003973364,0.000041233317,0.00006366101,0.00014405983,0.000003401421],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002332387,0.000080466874,0.9753481,0.000050224266,0.000042829022,0.00000790161,0.00024135446,8.287902e-8,0.004803535,0.009603445,0.00062730693,0.008961482],"study_design_scores_gemma":[0.0006782124,0.00013282085,0.93821526,0.00012891811,0.00004116996,0.000007661389,0.0025339867,0.0006290301,0.006489302,0.0034047014,0.0476681,0.00007086131],"about_ca_topic_score_codex":0.001102689,"about_ca_topic_score_gemma":0.00094945513,"teacher_disagreement_score":0.047040794,"about_ca_system_score_codex":0.00004158733,"about_ca_system_score_gemma":0.00015920759,"threshold_uncertainty_score":0.16669433},"labels":[],"label_agreement":null},{"id":"W4413137280","doi":"10.3390/v17081095","title":"Homologous and Heterologous Vaccination Regimens with mRNA and rVSV Platforms Induce Potent Immune Responses Against SFTSV Glycoprotein","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Immunogenicity; Virology; Heterologous; Biology; Immunization; Vaccination; Immune system; Immunity; Antibody; Immunology; Gene; Genetics","score_opus":0.01720630520748526,"score_gpt":0.28127914426659834,"score_spread":0.26407283905911305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413137280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961513,0.0015327052,0.00014052812,0.0005697531,0.00009099747,0.0004492952,0.000008064744,0.000104165,0.0009531587],"genre_scores_gemma":[0.9972858,0.0005812933,0.00023936175,0.0011410092,0.00003362979,0.00004456276,0.000007703789,0.000015403511,0.00065124896],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921834,0.000028627437,0.00019979109,0.00026081604,0.00009895141,0.00019347886],"domain_scores_gemma":[0.9995046,0.000068362395,0.00007326917,0.00022503683,0.00006240252,0.00006627475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015255042,0.00016661675,0.00025802464,0.00031412777,0.00019838061,0.000040439736,0.000037608625,0.00012086703,0.000013964027],"category_scores_gemma":[0.00010806685,0.00011550681,0.000028826953,0.00025929924,0.00008813981,0.00015698711,0.000059677786,0.00020027207,0.0000050503327],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012659092,0.001122692,0.2691432,0.0005959349,0.0012896345,0.0007696402,0.0013198837,0.0000882853,0.39626697,0.0031491898,0.0014090019,0.31218648],"study_design_scores_gemma":[0.004888153,0.0038746865,0.8286211,0.0004235009,0.00026511544,0.0005707713,0.00037339397,0.00018398791,0.15356249,0.00048199008,0.00638243,0.00037240767],"about_ca_topic_score_codex":0.00037938927,"about_ca_topic_score_gemma":0.00009475531,"teacher_disagreement_score":0.55947787,"about_ca_system_score_codex":0.000049754322,"about_ca_system_score_gemma":0.000060110775,"threshold_uncertainty_score":0.4710231},"labels":[],"label_agreement":null},{"id":"W4413306154","doi":"10.3390/v17081133","title":"RETRACTED: Kulanayake et al. Role of Protein VII in the Production of Infectious Bovine Adenovirus-3 Virion. Viruses 2024, 16, 1323","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Virology; Biology","score_opus":0.01609641390434851,"score_gpt":0.31143431870562566,"score_spread":0.29533790480127714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413306154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99252284,0.0038962285,0.000027264443,0.00076635287,0.00015174774,0.0007999579,0.000047191996,0.000018074363,0.0017703518],"genre_scores_gemma":[0.9957499,0.0008697357,0.000041733947,0.0025593583,0.00008621827,0.00013701295,0.00002734949,0.000028101927,0.0005006161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980396,0.00043231677,0.00045974713,0.00042974474,0.0003611863,0.00027738622],"domain_scores_gemma":[0.9987976,0.00005352007,0.00018489985,0.0007447614,0.00018553514,0.000033674405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009967425,0.00020915424,0.00026333902,0.00028231906,0.00006869391,0.000023766921,0.00041121425,0.00018582708,0.00007421214],"category_scores_gemma":[0.00060315843,0.00016824529,0.000105668776,0.0007138141,0.00021566323,0.000017914388,0.00012999534,0.00033817565,0.00001033826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018999807,0.00039455696,0.0058787954,0.000055544635,0.000097088356,0.0000016046896,0.000093874245,0.00008400409,0.98000956,0.00015137011,0.007130556,0.004203053],"study_design_scores_gemma":[0.00044303888,0.0014734522,0.0025626267,0.00008560798,0.000015981075,0.0000035192475,0.000164127,0.000005685006,0.8847663,0.00024255677,0.11009935,0.00013774518],"about_ca_topic_score_codex":0.0006749253,"about_ca_topic_score_gemma":0.0031088288,"teacher_disagreement_score":0.1029688,"about_ca_system_score_codex":0.000035961933,"about_ca_system_score_gemma":0.0002736513,"threshold_uncertainty_score":0.6860844},"labels":[],"label_agreement":null},{"id":"W4413380233","doi":"10.3390/v17081121","title":"White-Tailed Deer Prion Protein Gene Variability Suggests Selection Against Chronic Wasting Disease in Canada’s Prairies","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Chronic wasting disease; Biology; Allele; Genotype; Disease; Odocoileus; Herd; Genetics; Gene; Zoology; Prion protein; Medicine; Scrapie; Ecology; Internal medicine","score_opus":0.006745481840855133,"score_gpt":0.23748818544050068,"score_spread":0.23074270359964555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413380233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918038,0.0063861636,0.000767229,0.00023446478,0.00009891859,0.00055455917,0.000038608236,0.000021876802,0.00009434173],"genre_scores_gemma":[0.9985485,0.0003961941,0.00024824095,0.00037812899,0.00011398838,0.00014561982,0.00006590122,0.000014761706,0.00008866747],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99877226,0.00014952414,0.00025089382,0.00040791387,0.00012850613,0.00029089567],"domain_scores_gemma":[0.9994662,0.000018479945,0.00007708625,0.0002628026,0.00007016544,0.00010529973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022114579,0.00016586379,0.00013563526,0.000056094304,0.00012030878,0.00003471336,0.00014500725,0.00007564833,0.00002552146],"category_scores_gemma":[0.0005227539,0.00016839975,0.000049104558,0.00019483815,0.00003349482,0.000010725594,0.00012066888,0.000102744394,0.0000016929752],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013756806,0.000042651474,0.69707114,0.0001910481,0.000023600342,0.0000045652046,0.000005681275,0.001789457,0.29285085,0.000038221962,0.00028082568,0.007564407],"study_design_scores_gemma":[0.0010498407,0.000083603765,0.5051115,0.00047806284,0.000040252846,8.4166254e-7,0.000026683812,0.0020259256,0.4654153,0.0001527242,0.025097143,0.000518102],"about_ca_topic_score_codex":0.022428282,"about_ca_topic_score_gemma":0.40220904,"teacher_disagreement_score":0.37978077,"about_ca_system_score_codex":0.00038122074,"about_ca_system_score_gemma":0.003655989,"threshold_uncertainty_score":0.98408145},"labels":[],"label_agreement":null},{"id":"W4413395833","doi":"10.3390/v17081148","title":"“Big Events” and HIV Transmission Dynamics: Estimating Time Since HIV Infection from Deep Sequencing Data Among Sex Workers and Their Clients in Dnipro, Ukraine","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital; Manitoba Health; University of Manitoba; Public Health Agency of Canada","funders":"Canadian Institutes of Health Research","keywords":"Demography; Transmission (telecommunications); Human immunodeficiency virus (HIV); Sex work; Genotyping; Men who have sex with men; Sex workers; Viral load; Medicine; HIV drug resistance; Geopolitics; Virology; Environmental health; Biology; Population; Genotype; Antiretroviral therapy; Political science; Genetics; Sociology","score_opus":0.02411093127835194,"score_gpt":0.280025704341837,"score_spread":0.25591477306348503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413395833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904939,0.0017692833,0.0068387864,0.00009085971,0.000073290044,0.00025445205,0.0002696302,0.000045455454,0.0001643287],"genre_scores_gemma":[0.99749804,0.00023237219,0.0006684978,0.000046927944,0.00001149311,0.000016530967,0.0010965726,0.000010083008,0.00041950663],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989644,0.00018236921,0.00019971713,0.00037782892,0.000026382411,0.00024928356],"domain_scores_gemma":[0.99939525,0.00026101145,0.000048147653,0.00025227643,0.000013000001,0.000030321475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020969997,0.00015197991,0.00020401948,0.00013566246,0.00018133607,0.000024907757,0.0001194942,0.00012622014,0.000046429785],"category_scores_gemma":[0.000088092325,0.000119208344,0.000016511402,0.0001316887,0.00012911165,0.00019099387,0.00017568651,0.00020623558,0.000053884287],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013872079,0.000099804536,0.7974424,0.00003746342,0.00019948004,0.000009865519,0.0008499254,0.000078401645,0.028563935,0.000008286716,0.00014110144,0.17243062],"study_design_scores_gemma":[0.010320463,0.00036888578,0.81433314,0.002623028,0.00019001849,0.000030472864,0.0019214503,0.13435833,0.027743213,0.0010318585,0.006261366,0.0008177707],"about_ca_topic_score_codex":0.0019435119,"about_ca_topic_score_gemma":0.0007827129,"teacher_disagreement_score":0.17161284,"about_ca_system_score_codex":0.0001011412,"about_ca_system_score_gemma":0.00005906293,"threshold_uncertainty_score":0.48611754},"labels":[],"label_agreement":null},{"id":"W4413684043","doi":"10.3390/v17091163","title":"The Impact of COVID-19 and Related Public Health Measures on Hepatitis C Testing in Ontario, Canada","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo; BC Centre for Disease Control; University of British Columbia; Public Health Ontario; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Coronavirus disease 2019 (COVID-19); Virology; 2019-20 coronavirus outbreak; Public health; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Environmental health; Medicine; Pandemic; Internal medicine; Outbreak; Pathology; Infectious disease (medical specialty)","score_opus":0.14484276124806672,"score_gpt":0.39444581948334867,"score_spread":0.24960305823528195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413684043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98605573,0.0008495606,0.0000037373422,0.005432569,0.000054422682,0.00039274927,0.000026472784,0.000021365113,0.0071633677],"genre_scores_gemma":[0.9973126,0.00031579228,0.000027156537,0.0019494097,0.000006015414,0.000016613341,0.000004747637,0.000009527585,0.00035810814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998559,0.00022063941,0.0003379044,0.0001767725,0.0003588495,0.00034685424],"domain_scores_gemma":[0.9982251,0.0010646743,0.00007792321,0.00025179127,0.000103574755,0.00027693162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087125937,0.0001022508,0.00025857319,0.00020695932,0.00016959038,0.000028266726,0.00009754656,0.00004650221,0.00009208929],"category_scores_gemma":[0.0073866476,0.000068447625,0.000027600547,0.0005628851,0.00010590653,0.000047408503,0.000048197704,0.00035087753,0.0000016742206],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053633616,0.000040667757,0.9675388,0.000046362,0.0000622926,0.00003925867,0.00026946014,0.00002674303,0.00018976486,0.00019834345,0.0093012685,0.022233423],"study_design_scores_gemma":[0.0007652515,0.0003384181,0.96750605,0.00015958585,0.0000039904826,0.000005534876,0.000054553002,0.00017697836,0.00010876363,0.00013676866,0.03068879,0.000055331842],"about_ca_topic_score_codex":0.9994284,"about_ca_topic_score_gemma":0.999387,"teacher_disagreement_score":0.022178091,"about_ca_system_score_codex":0.00264602,"about_ca_system_score_gemma":0.023132738,"threshold_uncertainty_score":0.9824052},"labels":[],"label_agreement":null},{"id":"W4413969444","doi":"10.3390/v17081118","title":"First Use of Phage Therapy in Canada for the Treatment of a Life-Threatening, Multidrug-Resistant Staphylococcus epidermidis Periprosthetic Joint Infection","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"RTDS Technologies (Canada); Ottawa Hospital","funders":"Health Canada; Ottawa Hospital Research Institute","keywords":"Multiple drug resistance; Phage therapy; Medicine; Virology; Intensive care medicine; Bacteriophage; Biology; Drug resistance; Microbiology; Genetics; Escherichia coli","score_opus":0.04065542966828254,"score_gpt":0.26185271523631976,"score_spread":0.22119728556803722,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413969444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852735,0.0003323496,0.00010362862,0.00016161276,0.00013912219,0.0005892017,0.00011665934,0.0000056776666,0.000024394954],"genre_scores_gemma":[0.9981629,0.0013310832,0.000108300315,0.00017011397,0.0000068433446,0.000064597974,0.0000023319908,0.00000755813,0.00014624746],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993629,0.000029109662,0.0002709027,0.00014643562,0.000056231453,0.00013442706],"domain_scores_gemma":[0.9994865,0.0001782161,0.000112556954,0.00018764936,0.000010680919,0.000024397834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004217404,0.00010700284,0.00017823122,0.000036848,0.00009261589,0.000013555358,0.000058254485,0.000022404995,0.00025492287],"category_scores_gemma":[0.000027879287,0.00006997605,0.00008265544,0.00013939104,0.000081222715,0.000098663295,0.000020027333,0.000029812409,0.0000017792827],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041188733,0.0006415884,0.109821714,0.000036414647,0.00011029358,0.0000023242394,0.001230457,0.005230314,0.85443544,0.000022775066,0.00092113117,0.027135627],"study_design_scores_gemma":[0.00078433874,0.00025998877,0.70922136,0.000046644953,0.000024660476,3.3551964e-7,0.0001612363,0.00078241376,0.20792,0.000009455757,0.08070157,0.00008801864],"about_ca_topic_score_codex":0.95370054,"about_ca_topic_score_gemma":0.9488695,"teacher_disagreement_score":0.6465155,"about_ca_system_score_codex":0.0003998834,"about_ca_system_score_gemma":0.000082765975,"threshold_uncertainty_score":0.28535405},"labels":[],"label_agreement":null},{"id":"W4414070472","doi":"10.3390/v17091221","title":"A Critical Review of Bovine Viral Diarrhea Virus: Spotlights on Host Plasticity and Potential Spillover Events","year":2025,"lang":"en","type":"review","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Murdoch University","keywords":"Wild boar; Host (biology); Pestivirus; Virus; Phylogenetic tree; Transmission (telecommunications); Phylogenetics; Cattle Diseases; Porcine epidemic diarrhea virus","score_opus":0.05745241532456168,"score_gpt":0.3313935809700851,"score_spread":0.2739411656455234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414070472","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011017857,0.9964121,0.000002517451,0.00021630569,0.00020260493,0.0005635806,0.0008137716,0.000041280193,0.00064607925],"genre_scores_gemma":[0.00043630283,0.9968531,0.000011804563,0.0020998227,0.00030277055,0.000039485487,0.00011056031,0.0000024484677,0.00014367902],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978641,0.000387206,0.0006688443,0.00053193606,0.00022225396,0.00032564637],"domain_scores_gemma":[0.9982937,0.0012103668,0.00023170971,0.00008325261,0.000048688682,0.00013226455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002573373,0.00039147472,0.0015801309,0.000040879633,0.00011075662,0.000018982662,0.0003165772,0.0001928052,0.0005906682],"category_scores_gemma":[0.0012984909,0.00014106608,0.0004449254,0.00024932242,0.00014935953,0.000092340255,0.000286661,0.0002004063,0.00011493356],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002278065,0.00063549925,0.00014021512,0.17104217,0.00031938025,0.000062828534,0.0000024526973,6.4377005e-8,0.00014120198,0.008128026,0.03190311,0.78739727],"study_design_scores_gemma":[0.00005422625,0.00041999112,0.0025280518,0.06689597,0.0009153162,0.0000022328936,0.0000012226764,0.0000010448435,0.000003870777,0.00019169522,0.92868423,0.00030212512],"about_ca_topic_score_codex":0.00010467645,"about_ca_topic_score_gemma":0.000021638609,"teacher_disagreement_score":0.89678115,"about_ca_system_score_codex":0.00002342477,"about_ca_system_score_gemma":0.000023319226,"threshold_uncertainty_score":0.64674026},"labels":[],"label_agreement":null},{"id":"W4414206368","doi":"10.3390/v17091238","title":"Integrative Mechanistic Studies Identify Reticulon-3 as a Critical Modulator of Infectious Exosome-Driven Dengue Pathogenesis","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"PROTEO; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dengue fever; Dengue virus; Viral replication; Viral pathogenesis; Downregulation and upregulation; Exosome; Pathogenesis; Biogenesis; Immune system","score_opus":0.025444074323954593,"score_gpt":0.3885885579288585,"score_spread":0.3631444836049039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414206368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877025,0.007852007,0.0021754429,0.00046800025,0.00050327706,0.00047166573,0.000077650555,0.000099979254,0.0006495116],"genre_scores_gemma":[0.9975684,0.00040568996,0.00015707585,0.00130062,0.00010096029,0.00013701552,0.000005211168,0.000018742297,0.00030623362],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874747,0.0000977421,0.00036484702,0.00032530972,0.00024385068,0.0002208085],"domain_scores_gemma":[0.9985736,0.0004229099,0.00007076761,0.00034265115,0.00047575042,0.00011429449],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009899701,0.00020369938,0.0005693911,0.0001831406,0.000093781295,0.000022013199,0.00009730616,0.00008891447,0.0001367814],"category_scores_gemma":[0.0030561395,0.00015624038,0.0002014487,0.00029873225,0.00018326804,0.000070862334,0.0000948845,0.000117997064,0.000043588712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010384277,0.0015281803,0.051386297,0.0020984733,0.0028217821,0.00046955718,0.0015001704,0.000022665126,0.6420585,0.28428438,0.0036889699,0.009102627],"study_design_scores_gemma":[0.014613351,0.004964488,0.34536046,0.009694961,0.016009172,0.00017247935,0.024287304,0.004393493,0.43284932,0.14010867,0.0055541517,0.0019921232],"about_ca_topic_score_codex":0.00011881862,"about_ca_topic_score_gemma":0.00004199531,"teacher_disagreement_score":0.29397416,"about_ca_system_score_codex":0.00007744671,"about_ca_system_score_gemma":0.00017811992,"threshold_uncertainty_score":0.6371297},"labels":[],"label_agreement":null},{"id":"W4414248479","doi":"10.3390/v17091245","title":"Evaluation of Porcine Gastric Mucin-Based Method for Extraction of Noroviruses from Seaweed Salad","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Health Canada; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Extraction (chemistry); Norovirus; Algae; Centrifugation; Incubation; Contamination; Detection limit","score_opus":0.12121216406879687,"score_gpt":0.4779116628304071,"score_spread":0.3566994987616102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414248479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8746327,0.001003109,0.12198012,0.0007325989,0.00017017654,0.0008702194,0.00023867516,0.000029694744,0.00034268026],"genre_scores_gemma":[0.9447397,0.00006115964,0.05410182,0.0007309528,0.00008351543,0.00009151127,0.000102047066,0.000012503016,0.000076810946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982365,0.00043586077,0.0004896453,0.00023073211,0.000392916,0.00021434425],"domain_scores_gemma":[0.9982646,0.00049506023,0.00019965229,0.00025840863,0.0007147103,0.000067570305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018561456,0.00011100785,0.00047192347,0.00033465162,0.000028972177,0.0000035139542,0.00007864735,0.000084494415,0.00021223923],"category_scores_gemma":[0.0044520744,0.0000958485,0.00013529115,0.000265667,0.00006888126,0.000066450375,0.000019768942,0.00010067569,0.000003448255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021676759,0.00028463968,0.084013425,0.00018144755,0.00020327853,0.0000013031088,0.000012609576,0.0004339386,0.83578205,0.000050330604,0.0037238041,0.073145464],"study_design_scores_gemma":[0.009709167,0.0020609328,0.3877627,0.00054202584,0.0011408268,0.0000044872672,0.0001292014,0.044358492,0.54899067,0.0012674164,0.0039240005,0.00011006768],"about_ca_topic_score_codex":0.0026082525,"about_ca_topic_score_gemma":0.00022201476,"teacher_disagreement_score":0.30374926,"about_ca_system_score_codex":0.000089013476,"about_ca_system_score_gemma":0.00032061327,"threshold_uncertainty_score":0.53298706},"labels":[],"label_agreement":null},{"id":"W4414393582","doi":"10.3390/v17091280","title":"Ruvidar®—An Effective Anti-Herpes Simplex Virus Agent","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Herpes simplex virus; Vero cell; Viral replication; Population; Latency (audio); DNA; Virus; Glioblastoma; DNA replication","score_opus":0.024759519577906397,"score_gpt":0.3554253526708889,"score_spread":0.33066583309298253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414393582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9806886,0.0004253349,0.0003339517,0.00012047647,0.0003980416,0.0006491738,0.000045146324,0.0002545691,0.017084729],"genre_scores_gemma":[0.9959231,0.00012855219,0.00025346107,0.002525213,0.00011900712,0.00012507773,0.000019107098,0.000024788169,0.00088166754],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989561,0.00008253037,0.00021048723,0.0003330351,0.00014753554,0.00027033995],"domain_scores_gemma":[0.99922866,0.000107227876,0.00004470982,0.0004153175,0.000069740025,0.00013432241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010932136,0.00020573524,0.00032210798,0.00021553205,0.00020572814,0.00004349503,0.00007061821,0.00010924228,0.00048242178],"category_scores_gemma":[0.00008021318,0.00016454207,0.00011524031,0.00036194728,0.00008015056,0.00015214925,0.000046159283,0.000113224465,0.00049132743],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019587185,0.0019522697,0.045128886,0.000078182,0.00074766047,0.00013260478,0.00016952152,0.000014464358,0.010254275,0.0019041894,0.0038077426,0.93561435],"study_design_scores_gemma":[0.0016288408,0.0002857652,0.18719698,0.000096166565,0.00026261195,0.000009186694,0.000047846148,0.00003056617,0.12615064,0.00032683674,0.6838209,0.00014367436],"about_ca_topic_score_codex":0.0011880045,"about_ca_topic_score_gemma":0.00015555954,"teacher_disagreement_score":0.93547064,"about_ca_system_score_codex":0.00013530547,"about_ca_system_score_gemma":0.00008645804,"threshold_uncertainty_score":0.6709831},"labels":[],"label_agreement":null},{"id":"W4414438693","doi":"10.3390/v17101286","title":"Characterization of Novel Luteoviruses in Canadian Highbush Blueberries Using High-Throughput Sequencing","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"British Columbia Blueberry Council; Simon Fraser University","funders":"Mitacs; Hospital for Sick Children; Genome British Columbia","keywords":"Plant virus; Genome; Virus classification; DNA sequencing; Virus; Luteovirus; Illumina dye sequencing; Deep sequencing","score_opus":0.08030578837950399,"score_gpt":0.29408434621651053,"score_spread":0.21377855783700656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414438693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979471,0.00011429077,0.000008322932,0.00029164986,0.0001310573,0.00017035528,0.0010303016,0.000028924898,0.0002779768],"genre_scores_gemma":[0.9990512,0.00021266635,0.00009469174,0.00047216573,0.00005818317,0.000009841029,0.00004658939,9.469905e-7,0.00005370815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989121,0.00004959382,0.0002555984,0.0002245101,0.00016389678,0.00039428505],"domain_scores_gemma":[0.99955976,0.00016857075,0.00007127038,0.000054963468,0.000073260504,0.00007216817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001881131,0.00012604703,0.000225777,0.000105949744,0.00018267959,0.00004466754,0.000206229,0.00007716489,0.000052501324],"category_scores_gemma":[0.00018997518,0.000058579244,0.000032246106,0.0007785213,0.000112070076,0.0002856224,0.000089621426,0.00009172175,0.0000053551503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014137909,0.000026506656,0.017864868,0.000014779359,0.000015997995,0.0000043274986,0.00007287828,0.000031823514,0.97974974,0.00097263674,0.000037023376,0.0011952834],"study_design_scores_gemma":[0.00019823233,0.00004250338,0.31939653,0.00021788513,0.0000120297145,0.0000012883636,0.00020329798,0.00026112472,0.66601956,0.00015359321,0.0132855605,0.0002083751],"about_ca_topic_score_codex":0.72334546,"about_ca_topic_score_gemma":0.75660014,"teacher_disagreement_score":0.31373018,"about_ca_system_score_codex":0.00024263925,"about_ca_system_score_gemma":0.00016662417,"threshold_uncertainty_score":0.27849683},"labels":[],"label_agreement":null},{"id":"W4414615627","doi":"10.3390/v17101308","title":"Genetic Variation and Strain Dynamics in Chronic Wasting Disease","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Chronic wasting disease; Strain (injury); Disease; Genotype; Genetic variation; Genetic diversity; Transmission (telecommunications); Pathogenesis; Transgene","score_opus":0.008580020612258528,"score_gpt":0.26427800225941184,"score_spread":0.2556979816471533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414615627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9753896,0.020746382,0.0034506093,0.00008572094,0.000045192883,0.00012405048,0.00004665593,0.000008452764,0.00010335867],"genre_scores_gemma":[0.99688387,0.002370083,0.00032424854,0.00028098398,0.000060111874,0.000016806893,0.00002380997,0.000006036152,0.000034044064],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995544,0.00002910143,0.00009829404,0.00017449833,0.000035043533,0.00010864845],"domain_scores_gemma":[0.99979615,0.000009123449,0.000023764345,0.00011784679,0.000010673701,0.000042413423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000572117,0.000065625674,0.00005068405,0.00004120408,0.000039728668,0.00002328344,0.000057073303,0.00003983859,0.000009818364],"category_scores_gemma":[0.000087124936,0.000069108435,0.000018829973,0.00006564792,0.000020533416,0.0000029121134,0.000068624635,0.000031758365,0.0000010854325],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009875763,0.000049756545,0.30609414,0.00032799673,0.000038736038,0.000010582865,0.000022946615,0.0016188105,0.5610922,0.0022486758,0.00010307878,0.12829435],"study_design_scores_gemma":[0.00074896164,0.000060571783,0.9673843,0.00022000894,0.000032223797,9.285694e-7,0.000032356143,0.020643245,0.0063443454,0.0013702249,0.002938198,0.00022462902],"about_ca_topic_score_codex":0.000033422806,"about_ca_topic_score_gemma":0.00013477735,"teacher_disagreement_score":0.66129017,"about_ca_system_score_codex":0.000047863363,"about_ca_system_score_gemma":0.00012123474,"threshold_uncertainty_score":0.28181604},"labels":[],"label_agreement":null},{"id":"W4415362147","doi":"10.3390/v17101392","title":"A Novel Municipal-Level Approach to Uncover the Hidden Burden of Hepatitis C: A Replicable Model for National Elimination Strategies","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Saint-Luc","funders":"","keywords":"Hepatitis C; Public health; Chronic hepatitis; Resource (disambiguation); Resource allocation; Hepatitis","score_opus":0.1673298952830494,"score_gpt":0.39914680097680943,"score_spread":0.23181690569376004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415362147","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40734187,0.00035414787,0.4194071,0.0055013765,0.00014094269,0.0050111115,0.0019142955,0.00014268613,0.16018647],"genre_scores_gemma":[0.9630317,0.000052634336,0.027689485,0.0014287218,0.000084814004,0.0006982786,0.00004980824,0.000023779323,0.0069407406],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.998492,0.000033018514,0.00033078546,0.0002907045,0.0006070735,0.00024639422],"domain_scores_gemma":[0.998471,0.00031955593,0.000068143505,0.00041355606,0.00066489127,0.00006282505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054811174,0.00012858529,0.00025248143,0.000264255,0.00011898081,0.00005162139,0.00025994857,0.00009011867,0.000033965815],"category_scores_gemma":[0.001040045,0.00009751279,0.00008532259,0.00048468448,0.000092857255,0.00018473962,0.00012294084,0.00013305676,0.000011147808],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018982431,0.0016942221,0.0042936164,0.0018461852,0.0009397763,0.0000026814039,0.011185373,0.05358898,0.2587634,0.54225755,0.09444686,0.029083146],"study_design_scores_gemma":[0.002350545,0.00029408484,0.008162089,0.0002659279,0.00011042304,0.0000040453656,0.0011239117,0.926715,0.014593744,0.006938236,0.03920139,0.00024060637],"about_ca_topic_score_codex":0.0033609301,"about_ca_topic_score_gemma":0.00067215424,"teacher_disagreement_score":0.87312603,"about_ca_system_score_codex":0.00016131085,"about_ca_system_score_gemma":0.00087361713,"threshold_uncertainty_score":0.50807434},"labels":[],"label_agreement":null},{"id":"W4415362258","doi":"10.3390/v17101391","title":"A Highly Sensitive BRET-Based Reporter for Live-Cell Detection of HIV-1 Protease Activity and Inhibitor Screening","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministero dell'Università e della Ricerca; University of Toronto; Università degli Studi di Padova","keywords":"Proteases; Protease; Luciferase; Förster resonance energy transfer; Viability assay; In vitro; Bioluminescence; Cell culture; Transfection; Cleavage (geology)","score_opus":0.016435116821428564,"score_gpt":0.2814074373262646,"score_spread":0.26497232050483605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415362258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9796331,0.00014928562,0.019535841,0.00010392639,0.000032348467,0.00041100054,0.000045952875,0.000009801617,0.000078763864],"genre_scores_gemma":[0.9986798,0.000024282777,0.0006561153,0.00013919084,0.00008480942,0.00007290622,0.00002231495,0.000009316795,0.0003112366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929225,0.000031842137,0.00014870148,0.00028576696,0.000079712074,0.0001617362],"domain_scores_gemma":[0.99949926,0.00003123075,0.000089250716,0.00018006342,0.00015644067,0.000043749624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015809677,0.000105215564,0.00012546046,0.000055220535,0.00006731081,0.000014791999,0.000051441497,0.00012853557,9.641883e-7],"category_scores_gemma":[0.000153635,0.000098155164,0.000059855298,0.00008986943,0.00012085068,0.000008380055,0.00005316219,0.000056047404,5.5250285e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057659514,0.000073699426,0.004467908,0.00016783456,0.000018728415,0.0000018269961,0.000009605928,8.944803e-7,0.9901748,0.0000014843233,0.00030640906,0.004200249],"study_design_scores_gemma":[0.0005454054,0.00021628868,0.0014482897,0.00006842411,0.000019164316,0.000001992806,0.000063941414,0.00023377697,0.9949785,0.000004272548,0.0023194843,0.00010046221],"about_ca_topic_score_codex":0.000083140934,"about_ca_topic_score_gemma":0.00002369571,"teacher_disagreement_score":0.019046748,"about_ca_system_score_codex":0.000007879262,"about_ca_system_score_gemma":0.000098571414,"threshold_uncertainty_score":0.40026516},"labels":[],"label_agreement":null},{"id":"W4415403775","doi":"10.3390/v17101398","title":"Immune Evasion by the NSs Protein of Rift Valley Fever Virus: A Viral Houdini Act","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Defense Threat Reduction Agency","keywords":"Rift Valley fever; Arbovirus; Innate immune system; Immune system; Evasion (ethics); Virus; Host (biology); Virulence","score_opus":0.022516216147593048,"score_gpt":0.30928711139414505,"score_spread":0.286770895246552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415403775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99317855,0.0013847061,0.00016326964,0.00065733393,0.00020282494,0.00058965856,0.000024074825,0.00007366098,0.0037259285],"genre_scores_gemma":[0.99583876,0.000105854655,0.00006356081,0.0008228847,0.000060880713,0.000057791105,0.0000065903105,0.00001587532,0.003027797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999118,0.00007144477,0.0002871166,0.00017604922,0.00017130689,0.00017612506],"domain_scores_gemma":[0.9993718,0.00006061617,0.00008974224,0.00037533834,0.00006557698,0.000036922982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021115792,0.00014063039,0.00025905055,0.00010713103,0.00013627374,0.00001832435,0.00011552211,0.000092375136,0.0002759068],"category_scores_gemma":[0.00015216137,0.000085610205,0.00014255944,0.00033963454,0.00011410936,0.00010224645,0.0000723682,0.00020565088,0.000055691333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002338095,0.00036173707,0.0073530637,0.0000747596,0.00016530776,0.000002786784,0.00012795653,0.0000035171017,0.9686311,0.0008208313,0.01709296,0.005132201],"study_design_scores_gemma":[0.001341908,0.00045641442,0.03006593,0.00038313295,0.00015164103,0.000006101904,0.00009655558,0.000057069803,0.81322306,0.00029159719,0.15378346,0.00014315287],"about_ca_topic_score_codex":0.0020446125,"about_ca_topic_score_gemma":0.00005091206,"teacher_disagreement_score":0.15540804,"about_ca_system_score_codex":0.000040246265,"about_ca_system_score_gemma":0.00009138795,"threshold_uncertainty_score":0.34910828},"labels":[],"label_agreement":null},{"id":"W4415447465","doi":"10.3390/v17111406","title":"Potential Vaccine or Antimicrobial Reagents: Simple Systems for Producing Lambda Display Particles (LDP) and Sheathed Lambda DNA Vaccine Particles (LDNAP)","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Bill and Melinda Gates Foundation","keywords":"Lytic cycle; Capsid; Bacteriophage; Phage display; Phagemid; Gene; Plasmid; Antimicrobial peptides; Gene cassette","score_opus":0.02084964047390395,"score_gpt":0.3033494903414365,"score_spread":0.2824998498675325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415447465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99327093,0.0011405773,0.003446723,0.00071317074,0.00038746223,0.0008040855,0.00016958169,0.000034956818,0.000032507432],"genre_scores_gemma":[0.9956705,0.0015080107,0.0007881778,0.0007032923,0.0004777032,0.00008225674,0.00014808257,0.000027365417,0.00059459714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812585,0.00007784487,0.00054471963,0.0004788501,0.00019906764,0.00057367515],"domain_scores_gemma":[0.99902904,0.000071382885,0.000109646775,0.0004420433,0.00016984985,0.0001780644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005018892,0.00024528438,0.00031798845,0.00009518941,0.00024007566,0.00016432456,0.00025956868,0.00017853627,0.000016135875],"category_scores_gemma":[0.00070686766,0.00017987305,0.00008516893,0.00017360154,0.000087416236,0.000019356254,0.00028358607,0.00009032545,0.000009007168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012101668,0.00020822056,0.0057321345,0.0005539368,0.00020366136,0.00000584502,0.00009707277,0.00006488824,0.9522594,0.00006755248,0.029883444,0.009713665],"study_design_scores_gemma":[0.0033421512,0.0008118087,0.007385098,0.00014944916,0.00014000089,0.000019110796,0.00038704803,0.0038849441,0.8859922,0.000121442645,0.097369276,0.00039746336],"about_ca_topic_score_codex":0.00014375823,"about_ca_topic_score_gemma":0.00023182413,"teacher_disagreement_score":0.06748583,"about_ca_system_score_codex":0.000018098124,"about_ca_system_score_gemma":0.00014094377,"threshold_uncertainty_score":0.733501},"labels":[],"label_agreement":null},{"id":"W4415811283","doi":"10.3390/v17111453","title":"Within-Subtype HIV-1 Polymorphisms and Their Impacts on Intact Proviral DNA Assay (IPDA) for Viral Reservoir Quantification","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Phylogenetic tree; Primer (cosmetics); DNA; Human immunodeficiency virus (HIV); DNA sequencing; Phylogenetics; Genome; Assay sensitivity","score_opus":0.03596856209472258,"score_gpt":0.3053549863447838,"score_spread":0.2693864242500612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415811283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99375325,0.0018177885,0.0002872913,0.0014791406,0.00031438807,0.0007186542,0.00050115166,0.00008278914,0.00104554],"genre_scores_gemma":[0.99582547,0.00005944011,0.000060368777,0.0005357146,0.000024311546,0.00012276122,0.00032016376,0.000014337394,0.0030374231],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989339,0.0001832634,0.00019587198,0.00031748306,0.00003208094,0.00033737218],"domain_scores_gemma":[0.99918324,0.0003537141,0.000072486124,0.0003059389,0.000050455437,0.000034140747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031422076,0.00017767676,0.00020719082,0.00017744127,0.00027645912,0.000045918336,0.0001529979,0.00015917115,0.0000568613],"category_scores_gemma":[0.00025881684,0.00012104943,0.000058950434,0.00011338723,0.00016575016,0.00012298868,0.000059627582,0.00017631945,0.00045894829],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002116685,0.0003394376,0.011887661,0.00004361514,0.0003770922,0.0000032566497,0.0004044975,0.0000023801092,0.94437164,0.010604641,0.023088418,0.006760677],"study_design_scores_gemma":[0.0019893874,0.0010324395,0.02180904,0.000079006386,0.000032124248,0.0000056578087,0.0001861873,0.000013662651,0.9158798,0.0010063492,0.057801574,0.00016481269],"about_ca_topic_score_codex":0.00014724991,"about_ca_topic_score_gemma":0.00010474407,"teacher_disagreement_score":0.034713157,"about_ca_system_score_codex":0.00006043047,"about_ca_system_score_gemma":0.00015059502,"threshold_uncertainty_score":0.5899005},"labels":[],"label_agreement":null},{"id":"W4415854764","doi":"10.3390/v17111472","title":"Kinetics of Viral Genome Distribution in Swine Peripheral Lymphoid Organs Following Oronasal Infection with Attenuated African swine fever virus strains","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Calgary; University of Saskatchewan; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency; National Pork Board","keywords":"African swine fever virus; Spleen; Virulence; Virus; Lymphatic system; Genome; Lymph node; Lymph","score_opus":0.018447856726866718,"score_gpt":0.24567845138750724,"score_spread":0.22723059466064052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415854764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984755,0.00008259617,0.00017478093,0.00045302723,0.00006544629,0.0001760847,0.00012424734,0.000055285072,0.00039305646],"genre_scores_gemma":[0.9990744,0.000040382965,0.000022721704,0.00039018152,0.0000721771,0.000012648317,0.00028818776,0.0000014144941,0.00009789669],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990205,0.00009939622,0.0002682828,0.00024362029,0.00010871188,0.0002594705],"domain_scores_gemma":[0.99973905,0.000051014256,0.00008250911,0.000049211263,0.00003412402,0.000044061664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012398144,0.00014927586,0.00024539622,0.000027942671,0.00007109027,0.000019637906,0.000116731906,0.00007427532,0.000174993],"category_scores_gemma":[0.000060786602,0.00006644078,0.00007470892,0.000585726,0.00007512255,0.00012978309,0.00006833329,0.0000668717,0.0000059739273],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015135633,0.0001943513,0.39230245,0.0000115693665,0.00004973515,0.000006841181,0.00002465068,0.0001717906,0.60501695,0.0004072953,0.00012812413,0.0015349172],"study_design_scores_gemma":[0.00037424007,0.00034579707,0.99014354,0.000023835619,0.000045239933,5.464677e-7,0.00009487932,0.000108089516,0.0032478103,0.00011851305,0.005358495,0.0001390259],"about_ca_topic_score_codex":0.0028832937,"about_ca_topic_score_gemma":0.004587135,"teacher_disagreement_score":0.6017691,"about_ca_system_score_codex":0.000092856746,"about_ca_system_score_gemma":0.000008657835,"threshold_uncertainty_score":0.4358697},"labels":[],"label_agreement":null},{"id":"W4415854771","doi":"10.3390/v17111470","title":"Comparative Analysis of Extracellular Vesicle and Virus Co-Purified Fractions Produced by Contemporary Influenza A and B Viruses in Different Human Cell Lines","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Sentinelle Nord, Université Laval; Fonds de recherche du Québec; Canada First Research Excellence Fund; Canada Research Chairs","keywords":"Virus; Influenza A virus; Ultracentrifuge; Cell culture; Immune system; Extracellular; Orthomyxoviridae; Western blot; Hemagglutinin (influenza)","score_opus":0.04656292532702087,"score_gpt":0.3531375787380889,"score_spread":0.306574653411068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415854771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97544855,0.023467299,0.00014556403,0.000017931605,0.00002493202,0.0003073565,0.00021376209,0.000014956976,0.00035966188],"genre_scores_gemma":[0.99916136,0.00015627722,0.000047942653,0.0003754849,0.00002345028,0.000042840613,0.00007609114,0.000012349086,0.000104218656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986577,0.00015381399,0.00044336703,0.0004708942,0.00010809117,0.00016610573],"domain_scores_gemma":[0.99923766,0.00006697651,0.00017590074,0.0003793164,0.000058215373,0.00008192641],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013261526,0.00022463108,0.00043543917,0.00025917252,0.000097027165,0.00003641694,0.00013595381,0.00012729867,0.000013197233],"category_scores_gemma":[0.000056943525,0.00021254388,0.000081899234,0.00032289483,0.00026383874,0.000017733479,0.00010115497,0.00011169617,0.0000010155122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016955413,0.0004674301,0.111928046,0.00005290805,0.00035321206,0.000002888803,0.00013128182,0.000026776666,0.8859017,0.00011214407,0.00081497856,0.000039074108],"study_design_scores_gemma":[0.0007981893,0.0001016695,0.034364834,0.00002387859,0.00025606374,2.2446544e-7,0.00025177927,0.000076317425,0.95307046,0.00004050206,0.010824619,0.00019144196],"about_ca_topic_score_codex":0.00021963824,"about_ca_topic_score_gemma":0.00013921465,"teacher_disagreement_score":0.07756322,"about_ca_system_score_codex":0.000013520707,"about_ca_system_score_gemma":0.000052162097,"threshold_uncertainty_score":0.8667288},"labels":[],"label_agreement":null},{"id":"W4416065722","doi":"10.3390/v17111487","title":"Multi-Omic Analysis of Bacteriophage-Insensitive Mutants Reveals a Putative Role for the Rcs Two-Component Phosphorelay System in Phage Resistance Development in Erwinia amylovora","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Wilfrid Laurier University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Mutant; Mutagenesis; Virulence; Erwinia; Gene; Biofilm; Mutation; Escherichia coli; Bacteriophage","score_opus":0.02359359991588342,"score_gpt":0.26341161117007106,"score_spread":0.23981801125418764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416065722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967882,0.0012231776,0.000027416037,0.00008616902,0.000087764325,0.0006569833,0.0010482041,0.000021370688,0.000060703227],"genre_scores_gemma":[0.9989015,0.000075709926,0.00056134444,0.00014450932,0.000012321154,0.0001628492,0.000054939035,0.0000012977156,0.000085537875],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984456,0.00018220845,0.00057345093,0.00037071735,0.00013905189,0.00028898226],"domain_scores_gemma":[0.99845886,0.0011274194,0.00022799788,0.000080360376,0.00007812426,0.000027261594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005788168,0.00019525323,0.0005709173,0.0000946887,0.0001428946,0.000029021814,0.00024521412,0.00006167053,0.000011372986],"category_scores_gemma":[0.0001155156,0.00007868978,0.00011474803,0.0012387873,0.00007549103,0.000072012845,0.000106321975,0.000085071886,0.000005216161],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041522406,0.0001254165,0.025096072,0.00003350281,0.0004979024,0.000019108105,0.001366461,0.00006363205,0.97010475,0.00008484966,0.000020934825,0.0021721283],"study_design_scores_gemma":[0.0004961531,0.000020998881,0.9382735,0.00022307881,0.00015181799,5.781727e-7,0.0025767006,0.0006618253,0.05661988,0.0000099138715,0.0008166617,0.00014892605],"about_ca_topic_score_codex":0.00075714657,"about_ca_topic_score_gemma":0.023707248,"teacher_disagreement_score":0.9134849,"about_ca_system_score_codex":0.00017623861,"about_ca_system_score_gemma":0.000027902985,"threshold_uncertainty_score":0.99410754},"labels":[],"label_agreement":null},{"id":"W4416667221","doi":"10.3390/v17121541","title":"Integrating Machine Learning with Hybrid and Surrogate Models to Accelerate Multiscale Modeling of Acute Respiratory Infections","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"","keywords":"Autoencoder; IBM; Representation (politics); Multiscale modeling; Transmission (telecommunications); Surrogate model; Extreme learning machine","score_opus":0.2752111684676953,"score_gpt":0.42028224431430816,"score_spread":0.14507107584661288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416667221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.792977,0.00025409754,0.20554301,0.00020020758,0.00002644532,0.0002319404,0.000028308064,0.00013574435,0.0006032977],"genre_scores_gemma":[0.9884946,0.00009099065,0.010186245,0.0010681383,0.000014520891,0.00005074257,0.00000102068,0.00001614109,0.000077644574],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9988922,0.00014470884,0.00037877608,0.00028267992,0.00009979034,0.00020188653],"domain_scores_gemma":[0.9982488,0.0013008494,0.00011086692,0.00016846547,0.00011817782,0.000052819465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004979188,0.00017417873,0.00041374785,0.0001355533,0.0002472334,0.000025788444,0.00009743647,0.000040576866,0.0000072475236],"category_scores_gemma":[0.0013245622,0.0001222072,0.000044352168,0.0002558423,0.000063329484,0.00014813631,0.00025114891,0.00024346498,0.0000018750308],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005673572,0.0005639709,0.19249678,0.0008857061,0.0017476969,0.000033704626,0.0035208848,0.68952143,0.030300148,0.06646282,0.0013297274,0.012569789],"study_design_scores_gemma":[0.00088883203,0.00044870557,0.0005872122,0.0006290467,0.00026777858,0.0000025095671,0.00035260164,0.9402891,0.007291417,0.047368295,0.0014819625,0.00039253244],"about_ca_topic_score_codex":0.0007821118,"about_ca_topic_score_gemma":0.00065159093,"teacher_disagreement_score":0.25076768,"about_ca_system_score_codex":0.000042054515,"about_ca_system_score_gemma":0.000030994324,"threshold_uncertainty_score":0.49834654},"labels":[],"label_agreement":null},{"id":"W4416766204","doi":"10.3390/v17121551","title":"Fatigue Severity, Cognitive Strain, and Psychological Health in Long COVID: Untangling the Interconnected Aftermath from a Dedicated Long COVID Clinic","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Depression (economics); Cognition; Montreal Cognitive Assessment; Observational study; Coronavirus disease 2019 (COVID-19); Prospective cohort study; Psychological health; Illness severity; Effects of sleep deprivation on cognitive performance","score_opus":0.07391075906077968,"score_gpt":0.42263533468951675,"score_spread":0.34872457562873704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416766204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9770101,0.0022546921,0.0047054742,0.013498141,0.00024012594,0.0015946614,0.00026843336,0.00022756045,0.00020083798],"genre_scores_gemma":[0.9104388,0.0004711011,0.00017193756,0.08853807,0.00009442959,0.00008007426,0.00015796033,0.000023268514,0.00002440327],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99730027,0.0006586717,0.0006686254,0.00066447054,0.00025244907,0.00045551936],"domain_scores_gemma":[0.99457324,0.0043823053,0.00021208284,0.00040263796,0.00008276406,0.00034696682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008461137,0.000312669,0.0006720982,0.00028531541,0.000170425,0.00008844969,0.00025863678,0.00023055643,0.00023980875],"category_scores_gemma":[0.003965065,0.00022384932,0.00009057807,0.00055357686,0.00045134962,0.00017185025,0.00022411945,0.0007152459,0.00003448048],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031629791,0.00095321663,0.95999676,0.0007598359,0.00040655016,0.0011596472,0.0031679254,0.000004469192,0.00095716584,0.00009492331,0.0026594996,0.026677],"study_design_scores_gemma":[0.0066707428,0.00067438657,0.9868797,0.002483479,0.00015852792,0.00005629482,0.00079593173,0.00025241886,0.00033326168,0.0009881831,0.00043922663,0.00026784695],"about_ca_topic_score_codex":0.0012573012,"about_ca_topic_score_gemma":0.0023067093,"teacher_disagreement_score":0.07503993,"about_ca_system_score_codex":0.00022064672,"about_ca_system_score_gemma":0.0004745894,"threshold_uncertainty_score":0.912831},"labels":[],"label_agreement":null},{"id":"W4416766281","doi":"10.3390/v17121550","title":"Molecular Determinants of Species-Specific Interactions Between Protein Kinase R and Poxvirus K3 Orthologs","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Vaccinia; Antiviral protein; Protein kinase R; Virus; Protein kinase A; Viral protein","score_opus":0.035977241588921134,"score_gpt":0.31818612626594867,"score_spread":0.28220888467702754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416766281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99154586,0.0041105486,0.00016715014,0.00008749408,0.000169526,0.00030399486,0.00018077408,0.000042745123,0.0033919201],"genre_scores_gemma":[0.99719167,0.00017337008,0.00007432576,0.0001253409,0.000016980035,0.000033715205,0.000016593718,0.000010702989,0.0023573071],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886763,0.00018268984,0.00030504094,0.00027675976,0.000040464445,0.00032741902],"domain_scores_gemma":[0.9993477,0.00016068679,0.00008554147,0.00031123628,0.000062353414,0.00003246724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001571692,0.00015476535,0.0003136415,0.00027658502,0.00013950476,0.000019648962,0.00021318547,0.0001384972,0.00031958573],"category_scores_gemma":[0.00015008886,0.0001358758,0.00007130903,0.00021607846,0.00042725872,0.00011325323,0.0001984944,0.0002826425,0.0001807276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014377158,0.00007122658,0.04144389,0.00003226105,0.00009607367,0.000028074908,0.000052849562,1.8194157e-7,0.9317451,0.001625442,0.001172009,0.023589095],"study_design_scores_gemma":[0.00053686264,0.000090915986,0.057415195,0.00008559594,0.000019484469,0.00000785972,0.000060449238,3.0585468e-7,0.7956991,0.00037237207,0.14560875,0.000103098355],"about_ca_topic_score_codex":0.00021397031,"about_ca_topic_score_gemma":0.00007235018,"teacher_disagreement_score":0.14443675,"about_ca_system_score_codex":0.00002356859,"about_ca_system_score_gemma":0.0000678061,"threshold_uncertainty_score":0.5540855},"labels":[],"label_agreement":null},{"id":"W4417106739","doi":"10.3390/v17121590","title":"Innovative Nurse-Led Community Health Centre–Corrections Partnership for Hepatitis C Testing and Treatment in Victoria, British Columbia","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Hepatitis C virus research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Sport Centre Pacific; Capital Regional District; University of British Columbia; York University; Simon Fraser University; University of Victoria","funders":"AbbVie Canada; Telus","keywords":"Hepatitis C; General partnership; Phlebotomy; Hepatitis C virus; Health care; Public health; Community health","score_opus":0.08264252795385597,"score_gpt":0.38730738420923877,"score_spread":0.3046648562553828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417106739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907059,0.00025392452,0.000035119498,0.0005845977,0.00016537606,0.0015427837,0.00014582365,0.00009928464,0.0064671887],"genre_scores_gemma":[0.9941826,0.00027527573,0.000982359,0.0013728028,0.00008020189,0.0003748013,0.000055687564,0.000025022806,0.0026512665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984836,0.00035821367,0.0003660971,0.00024068993,0.00014954823,0.00040182658],"domain_scores_gemma":[0.9978362,0.001392969,0.00007158204,0.0002581537,0.00030762132,0.00013350986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046291732,0.00011697101,0.00040434115,0.00017201292,0.0004722583,0.00015291167,0.00006839025,0.00007996941,0.00006218842],"category_scores_gemma":[0.0028766817,0.00016322882,0.000031923348,0.0011776368,0.00012806959,0.00009660485,0.000037963553,0.0003034547,0.0000050421754],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004637938,0.00043619244,0.8934192,0.00010737128,0.00005809694,0.000011951286,0.00077030616,4.9903304e-7,0.00014251497,0.000048233513,0.0082521755,0.09670706],"study_design_scores_gemma":[0.003516349,0.0007743774,0.9475323,0.00089674065,0.000024405088,0.0000049505666,0.0008571313,0.00029596285,0.00028167287,0.00029558415,0.045379687,0.00014084505],"about_ca_topic_score_codex":0.6623352,"about_ca_topic_score_gemma":0.8535469,"teacher_disagreement_score":0.19121167,"about_ca_system_score_codex":0.00074992265,"about_ca_system_score_gemma":0.0008029354,"threshold_uncertainty_score":0.6656278},"labels":[],"label_agreement":null},{"id":"W4417361916","doi":"10.3390/v17121605","title":"RETRACTED: Kulanayake et al. Regions of Bovine Adenovirus-3 Protein VII Involved in Interactions with Viral and Cellular Proteins. Viruses 2024, 16, 732","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canada Foundation for Innovation","keywords":"Protein–protein interaction; Viral protein; Virus; Cell culture; Viral replication; Plasma protein binding","score_opus":0.023804166035916643,"score_gpt":0.3081007012412187,"score_spread":0.28429653520530207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417361916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935105,0.0022549015,0.0004967879,0.0014377227,0.00006478736,0.0010890738,0.00009068707,0.000030177478,0.0010253547],"genre_scores_gemma":[0.9937645,0.00038953437,0.00044421808,0.003433977,0.000051432475,0.00029675954,0.00006633951,0.00005016004,0.0015030478],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806786,0.0002752346,0.00042284108,0.00058481155,0.00027789874,0.00037136365],"domain_scores_gemma":[0.99889874,0.000042656127,0.00015431893,0.00065302453,0.00015306634,0.000098191886],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039504244,0.00029253244,0.00032559127,0.00037957192,0.00010245854,0.000052559048,0.00029907105,0.00018085181,0.00008908904],"category_scores_gemma":[0.00017296062,0.0002615172,0.00007456427,0.0005192937,0.00029809735,0.000033156743,0.0002002475,0.00047527807,0.000007604304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034571036,0.0003190964,0.004653071,0.000071536226,0.0001506251,0.000012832527,0.000047237216,0.00002003069,0.9850292,0.0002498832,0.0051926686,0.00079666596],"study_design_scores_gemma":[0.0012752409,0.0020510263,0.0008562243,0.00023649957,0.00002184875,0.0000033577676,0.0001408752,0.00001963262,0.9029054,0.00016973208,0.09206218,0.00025794693],"about_ca_topic_score_codex":0.00074771646,"about_ca_topic_score_gemma":0.010906972,"teacher_disagreement_score":0.086869515,"about_ca_system_score_codex":0.000051465147,"about_ca_system_score_gemma":0.00036152406,"threshold_uncertainty_score":0.9999837},"labels":[],"label_agreement":null},{"id":"W4417434980","doi":"10.3390/v17121638","title":"AI-Powered Identification of Human Cell Surface Protein Interactors of the Hemagglutinin Glycoprotein of High-Pandemic-Risk H5N1 Influenza Virus","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Alliance de recherche numérique du Canada; Institut de Recherche Clinique De Montréal","keywords":"Influenza A virus subtype H5N1; Hemagglutinin (influenza); Glycoprotein; Influenza A virus; Virus; Host (biology); Tropism; Glycan; Identification (biology); Tissue tropism","score_opus":0.048365083246010694,"score_gpt":0.3810146766842167,"score_spread":0.332649593438206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417434980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957424,0.0015918785,0.00004687041,0.00008938654,0.000116623734,0.0016165836,0.0002645061,0.00004400323,0.00048775092],"genre_scores_gemma":[0.9988268,0.0001023338,0.00018780772,0.00026223878,0.000024203353,0.000052070445,0.0000035434673,0.000026647778,0.0005143382],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99712867,0.00028500054,0.0012775632,0.00034036918,0.0006635156,0.0003048875],"domain_scores_gemma":[0.99721223,0.00021783602,0.00094389194,0.00096733455,0.0006033878,0.000055330464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065670576,0.00024666413,0.00070066546,0.00027404792,0.00013669214,0.000013800964,0.00045891956,0.00015086362,0.00010648978],"category_scores_gemma":[0.0014761175,0.00017797026,0.00020386565,0.0007960616,0.0005926549,0.00015679811,0.00037269644,0.00046244427,0.000015388392],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061973353,0.00033375982,0.10205326,0.0007767273,0.00020329098,8.710203e-7,0.0006922892,0.00003313669,0.8940035,0.00051637634,0.0003185591,0.00044850435],"study_design_scores_gemma":[0.0014973758,0.00023629196,0.101621814,0.0006949192,0.00010442018,3.4046005e-7,0.00022452675,0.000013894543,0.89404774,0.0005046745,0.0009454206,0.00010858556],"about_ca_topic_score_codex":0.0038484032,"about_ca_topic_score_gemma":0.00019884284,"teacher_disagreement_score":0.0036495603,"about_ca_system_score_codex":0.000109095374,"about_ca_system_score_gemma":0.00025215486,"threshold_uncertainty_score":0.7257417},"labels":[],"label_agreement":null},{"id":"W7113900405","doi":"10.3390/v17121598","title":"Nowcast-It: A Practical Toolbox for Real-Time Adjustment of Reporting Delays in Epidemic Surveillance","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Wellcome Trust; National Science Foundation","keywords":"Toolbox; Coding (social sciences); Nowcasting; Scalability; Visualization; Interval (graph theory)","score_opus":0.39045132131997956,"score_gpt":0.5198369886801534,"score_spread":0.12938566736017382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7113900405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94696826,0.0014067651,0.021949897,0.015587081,0.0004135304,0.0026282012,0.00012381714,0.00034075146,0.010581685],"genre_scores_gemma":[0.8459142,0.0010709406,0.14376879,0.007312961,0.00022371342,0.0007644021,0.000009921141,0.000057496018,0.00087757467],"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9968092,0.00027680938,0.0020061682,0.00039067908,0.00014877766,0.00036835554],"domain_scores_gemma":[0.97355455,0.024655528,0.0012519268,0.00037133027,0.00012583472,0.000040836985],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0044460185,0.00018423656,0.00089745724,0.00009555823,0.000060812406,0.000006821723,0.0001348565,0.00012564806,0.000046071116],"category_scores_gemma":[0.15435389,0.00014526669,0.00015276572,0.0002885125,0.000092017355,0.00007446794,0.00016116824,0.00012976545,0.000009636703],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009144639,0.0011270943,0.59650916,0.0023582238,0.00045919613,0.00006458618,0.0006146447,0.00019312622,0.024401722,0.123747155,0.24342366,0.006186981],"study_design_scores_gemma":[0.00392079,0.00090666354,0.40534738,0.0022919644,0.00034902673,0.000025658373,0.0010507129,0.008928672,0.011037696,0.49502227,0.06975104,0.0013681588],"about_ca_topic_score_codex":0.0005175387,"about_ca_topic_score_gemma":0.0006500741,"teacher_disagreement_score":0.3712751,"about_ca_system_score_codex":0.00017216198,"about_ca_system_score_gemma":0.00012610425,"threshold_uncertainty_score":0.8527694},"labels":[],"label_agreement":null},{"id":"W7116706017","doi":"10.3390/v18010013","title":"Influenza PA Substitutions and Genetic Diversity of A(H1N1)pdm09, A(H3N2), and B/Victoria Viruses in Japan During the 2023–2024 Season","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Health, Labour and Welfare; Shionogi; International Development Research Centre; Japan Agency for Medical Research and Development","keywords":"Subclade; Neuraminidase; Clade; Zanamivir; Lineage (genetic); Sanger sequencing; Genetic diversity; Neuraminidase inhibitor; Phylogenetics","score_opus":0.062816936667089,"score_gpt":0.35487737228321725,"score_spread":0.29206043561612827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7116706017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852531,0.012895662,0.00000369452,0.00019465064,0.00015657449,0.0004784516,0.00006575759,0.00003261446,0.0009195013],"genre_scores_gemma":[0.9961531,0.0025303967,0.000073507974,0.00083885225,0.000065389635,0.000029257333,6.595136e-7,0.000010034433,0.00029880094],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868447,0.00008786033,0.00028829637,0.00030340883,0.0003122458,0.00032371617],"domain_scores_gemma":[0.99910486,0.00030990812,0.000061670704,0.00032616235,0.00010773992,0.00008965062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002061629,0.00018623444,0.0003555446,0.0003153828,0.0004700084,0.000034369346,0.00014570374,0.00008768169,0.00005272084],"category_scores_gemma":[0.0006340943,0.00013781879,0.00004965596,0.0005752537,0.000639355,0.00014483396,0.0008262156,0.00028903072,0.000011585982],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030746267,0.00007060358,0.9770689,0.00036777233,0.00017312435,0.000022461887,0.00095197384,0.000020686504,0.019469194,0.0006042095,0.0004170346,0.0005265935],"study_design_scores_gemma":[0.0014834828,0.00007117265,0.9776132,0.0002880732,0.000120070916,0.000006067271,0.00059768197,0.000023403758,0.0066269273,0.00013423072,0.01292,0.00011566421],"about_ca_topic_score_codex":0.002240299,"about_ca_topic_score_gemma":0.0011372475,"teacher_disagreement_score":0.012842267,"about_ca_system_score_codex":0.00009974937,"about_ca_system_score_gemma":0.000109348475,"threshold_uncertainty_score":0.5620087},"labels":[],"label_agreement":null},{"id":"W7117118018","doi":"10.3390/v18010028","title":"Seven Strategies Implemented in Response to the 16th Ebola Virus Disease Outbreak in the Democratic Republic of Congo: Lessons Learned over a Three-Month Period","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Centers for Disease Control and Prevention; UNICEF; World Health Organization","keywords":"Ebola virus; Outbreak; Psychological intervention; Democracy; Disease; Health care; Ebola Hemorrhagic Fever; Community engagement","score_opus":0.06996383873440698,"score_gpt":0.4161260827158002,"score_spread":0.3461622439813932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117118018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9753284,0.0003563435,0.00010719822,0.021448664,0.00005094944,0.0011272932,0.000117549156,0.000029580564,0.0014340372],"genre_scores_gemma":[0.9968997,0.000056822748,0.000017777247,0.0021534308,0.000030914907,0.00023343462,0.000010654546,0.000014940463,0.00058231916],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979217,0.0006164746,0.00043090354,0.00029399627,0.00036360766,0.00037331606],"domain_scores_gemma":[0.9986258,0.00046671432,0.00006372201,0.0006443106,0.000100057834,0.00009940639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015503857,0.00017056568,0.0003085577,0.0004994615,0.00016004713,0.00012996797,0.00028060327,0.00006062049,0.00017105337],"category_scores_gemma":[0.0010194805,0.000097709526,0.000101416714,0.0013530186,0.0001446519,0.00017321389,0.00016188607,0.00036560328,0.000015000491],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05285127,0.00515315,0.47810712,0.00077187066,0.0008564674,0.000920917,0.01899037,0.001433933,0.31403974,0.046051737,0.034391973,0.046431437],"study_design_scores_gemma":[0.0020177406,0.00044488316,0.9700185,0.00022817393,0.00006247893,0.0000062291588,0.0049804077,0.000676158,0.0009598581,0.0012332442,0.019245954,0.00012638599],"about_ca_topic_score_codex":0.0062365653,"about_ca_topic_score_gemma":0.026724946,"teacher_disagreement_score":0.49191135,"about_ca_system_score_codex":0.00011141836,"about_ca_system_score_gemma":0.00086459034,"threshold_uncertainty_score":0.9910348},"labels":[],"label_agreement":null},{"id":"W7117297213","doi":"10.3390/v18010038","title":"The Forgotten History of Bacteriophages in Bulgaria: An Overview and Molecular Perspective on Their Role in Addressing Antibiotic Resistance and Therapy","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital","funders":"Medical University Sofia","keywords":"Bulgarian; Phage therapy; Antibiotic resistance; Perspective (graphical); Bacteriophage; Resistance (ecology)","score_opus":0.029545500261912425,"score_gpt":0.29446712416145937,"score_spread":0.26492162389954693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117297213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97537035,0.021491123,0.0000014026323,0.00022583891,0.00005876188,0.00012479103,0.000005737631,0.0000056825556,0.002716328],"genre_scores_gemma":[0.9946997,0.0044373036,0.00005007846,0.00054588256,0.0000037201335,0.0000037261987,4.1309215e-7,0.0000061667383,0.00025300318],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994677,0.0000797952,0.00012106378,0.00018690007,0.000037810994,0.00010674261],"domain_scores_gemma":[0.99971735,0.000069644964,0.000047310572,0.00014409091,0.0000048041866,0.000016783606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110643115,0.00008461198,0.00011484099,0.00004386703,0.000049897455,0.000025404053,0.00008708821,0.000033498716,0.000034631867],"category_scores_gemma":[0.000017636403,0.00006077882,0.000016197853,0.0000903149,0.00018616447,0.00016766414,0.00005518926,0.00009206124,0.0000011503124],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097300726,0.000077544726,0.004772166,0.000009778883,0.000008198738,0.0000036441631,0.0013869756,0.000005040669,0.9819705,0.00071182934,0.00008497904,0.010872074],"study_design_scores_gemma":[0.0004067695,0.0000687894,0.9296523,0.00025937535,0.0000049586183,0.0000012957951,0.0011264237,0.000025834348,0.05022045,0.0006786488,0.017451499,0.000103661434],"about_ca_topic_score_codex":0.0017383297,"about_ca_topic_score_gemma":0.0032168985,"teacher_disagreement_score":0.93175,"about_ca_system_score_codex":0.00021318143,"about_ca_system_score_gemma":0.000013081879,"threshold_uncertainty_score":0.2627846},"labels":[],"label_agreement":null},{"id":"W7117463862","doi":"10.3390/v18010044","title":"Developing Synthetic Full-Length SARS-CoV-2 cDNAs and Reporter Viruses for High-Throughput Antiviral Drug Screening","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; Toronto General Hospital; University of Alberta; University of Saskatchewan","funders":"Government of Saskatchewan; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada; Innovation Saskatchewan","keywords":"Complementary DNA; Viral replication; Virus; Reporter gene; Genome; Cloning (programming); Antiviral drug; Reverse genetics","score_opus":0.08977745469420732,"score_gpt":0.3908258931255202,"score_spread":0.30104843843131285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117463862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9840102,0.0012148008,0.011283262,0.00095415494,0.00032107823,0.00087642646,0.000026598102,0.00023344606,0.0010800381],"genre_scores_gemma":[0.8933133,0.000026573778,0.0076140002,0.09847938,0.0002507206,0.0001590835,0.0000042811143,0.000067614455,0.00008504103],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975588,0.00008042564,0.00058740244,0.0007436634,0.0003996795,0.0006300814],"domain_scores_gemma":[0.9985143,0.0005700025,0.00013684419,0.0005492662,0.00019824438,0.000031335192],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00060138485,0.00034168467,0.0006068041,0.0004227111,0.0003089245,0.00014470125,0.00020501022,0.00015628798,0.000003966676],"category_scores_gemma":[0.0008147413,0.00029672135,0.00013451226,0.00046271697,0.00026195528,0.00030321578,0.00023807616,0.00027830008,0.000027550699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001608432,0.00020092126,0.12100694,0.0009675967,0.000572591,0.00026000402,0.0004389161,2.459953e-7,0.8298065,0.0069015007,0.0072236387,0.031012695],"study_design_scores_gemma":[0.0014807597,0.00013905407,0.0033221066,0.0005971102,0.00013710954,0.00004088041,0.00016145235,0.000094709445,0.7515034,0.0012113462,0.24103166,0.00028038904],"about_ca_topic_score_codex":0.0007560173,"about_ca_topic_score_gemma":0.00028094373,"teacher_disagreement_score":0.23380803,"about_ca_system_score_codex":0.000113181755,"about_ca_system_score_gemma":0.0005080993,"threshold_uncertainty_score":0.9999485},"labels":[],"label_agreement":null},{"id":"W7117754475","doi":"10.3390/v18010054","title":"Expanding Horizons: Host Range Evolution and Treatment Strategies for Highly Pathogenic Avian Influenza H5N1 and H7N9","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Ottawa","keywords":"Influenza A virus subtype H5N1; Reassortment; Highly pathogenic; Influenza A virus; Pandemic; Transmission (telecommunications); Clade; Host (biology)","score_opus":0.09112684516675384,"score_gpt":0.393831007523415,"score_spread":0.30270416235666114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117754475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9709078,0.02647445,0.00029384467,0.00026696085,0.0000931086,0.0011313764,0.00012380295,0.00009946327,0.0006091743],"genre_scores_gemma":[0.9953769,0.0024623438,0.0006097887,0.0007147901,0.00013435958,0.00042404846,0.0000048998586,0.000021339245,0.0002515364],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99888426,0.000043837455,0.00023560344,0.0003272927,0.00015750817,0.00035152113],"domain_scores_gemma":[0.9992699,0.00026750128,0.00004968707,0.00020616685,0.000109513516,0.00009722045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016008667,0.00021562187,0.0003550287,0.00028115686,0.0003349671,0.00010058612,0.000046626505,0.000089877096,0.000006922934],"category_scores_gemma":[0.00022365928,0.0001662254,0.00006225173,0.00019264467,0.00021711808,0.0002646944,0.00007440331,0.000086561995,0.000006714806],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003672549,0.0003667748,0.60438967,0.0010639617,0.0011821212,0.000051703297,0.0026932824,0.000005174763,0.3277046,0.020930935,0.0014569476,0.0364823],"study_design_scores_gemma":[0.01624523,0.004369216,0.8623153,0.0009801759,0.00089717057,0.000019050374,0.0073710866,0.00012691745,0.02578987,0.0035103294,0.07774386,0.0006317989],"about_ca_topic_score_codex":0.00032962143,"about_ca_topic_score_gemma":0.00016485403,"teacher_disagreement_score":0.30191475,"about_ca_system_score_codex":0.00022914495,"about_ca_system_score_gemma":0.00018543095,"threshold_uncertainty_score":0.67784756},"labels":[],"label_agreement":null},{"id":"W7117758660","doi":"10.3390/v18010056","title":"A Tribute to Professor Andrew Otis Jackson","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Academic Writing and Publishing","field":"Arts and Humanities","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Natural Science Foundation of China","keywords":"Tribute; Sadness","score_opus":0.04913267703139523,"score_gpt":0.30270658814269036,"score_spread":0.2535739111112951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117758660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5180984,0.0023529653,0.00019163369,0.072009064,0.0032790764,0.00061705627,0.00032459604,0.00078294583,0.40234423],"genre_scores_gemma":[0.74676645,0.000043811873,0.00012608261,0.024961496,0.0017939273,0.00006692861,0.000015354579,0.00002162013,0.22620435],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932134,0.00003621615,0.00016446863,0.00016169949,0.00010409103,0.00021220426],"domain_scores_gemma":[0.99962324,0.00010686941,0.00003358777,0.00012535488,0.00006221347,0.000048720813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022451804,0.00009048677,0.00013029423,0.00009161602,0.0002946774,0.00032470375,0.00019088875,0.000051805382,0.0006779208],"category_scores_gemma":[0.00022105203,0.000076964156,0.000036047953,0.00007457301,0.000044632754,0.00032308747,0.000071621456,0.00018311923,0.00022695215],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015822596,0.000018677862,0.0006736628,0.00003084898,0.000016281385,0.0000015744588,0.005807652,6.235254e-7,0.00016910161,0.1740829,0.8122142,0.0069686696],"study_design_scores_gemma":[0.00014807592,0.000021894455,0.00020636074,0.00013257677,0.00001318597,3.3541434e-7,0.0019041025,0.0000043164655,0.0009098766,0.0025259228,0.9940351,0.00009820787],"about_ca_topic_score_codex":0.00041684083,"about_ca_topic_score_gemma":0.00044092478,"teacher_disagreement_score":0.228668,"about_ca_system_score_codex":0.000020726628,"about_ca_system_score_gemma":0.00004279431,"threshold_uncertainty_score":0.7422758},"labels":[],"label_agreement":null}]}