{"meta":{"query_hash":"110be430d28d","filters":{"venue":"npj Vaccines"},"cohort_total":91,"direct_labels_cover":0,"predictions_cover":91,"exported":91,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/110be430d28d","api":"https://metacan.xera.ac/api/v1/cohort?venue=npj+Vaccines"},"results":[{"id":"W2551325974","doi":"10.1038/npjvaccines.2016.21","title":"In vivo protection against ZIKV infection and pathogenesis through passive antibody transfer and active immunisation with a prMEnv DNA vaccine","year":2016,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":136,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; INOVIO Pharmaceuticals; Public Health Agency of Canada; University of Pennsylvania","keywords":"Zika virus; Virology; DNA vaccination; Biology; Immunology; Immune system; Immunity; Immunogen; Antibody; Virus; Interferon; Neutralizing antibody; Immunization; Medicine; Monoclonal antibody","score_opus":0.007527500506667664,"score_gpt":0.24738618166797804,"score_spread":0.23985868116131037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2551325974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99270976,0.00090671884,0.0044565233,0.00013577804,0.000086271466,0.00014777991,0.00024919046,0.00011487026,0.0011930905],"genre_scores_gemma":[0.99417526,0.0005519632,0.0018798186,0.00005810658,0.000027010037,0.00009509564,0.00042964422,0.000015659947,0.0027673987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980646,0.000031404576,0.00001283727,0.000041801206,0.000042143885,0.000065278706],"domain_scores_gemma":[0.9998784,0.00003412911,0.000034871147,0.000016892103,0.000012727067,0.000022916476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026665808,0.0006014171,0.00033227625,0.0003021634,0.000110540845,0.00033593236,0.0003661872,0.00072302413,0.0015155337],"category_scores_gemma":[0.00016218092,0.00019789021,0.000320579,0.0000903076,0.00032059738,0.0003014492,0.00015681062,0.0011845957,0.00043889662],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023169386,0.00020116975,0.000059818773,0.00004032776,0.000005712497,0.000016310833,0.000017474957,0.00012477436,0.9979296,0.000109108645,0.000027785038,0.0012362528],"study_design_scores_gemma":[0.00012860763,0.0072821253,0.0011664262,0.000016714157,0.000027521344,0.00015727791,0.00002036068,0.0010612984,0.9881704,0.00006995224,0.001894898,0.0000042750407],"about_ca_topic_score_codex":0.00033020813,"about_ca_topic_score_gemma":0.00026119954,"teacher_disagreement_score":0.0015155337,"about_ca_system_score_codex":0.00028921847,"about_ca_system_score_gemma":0.00018413206,"threshold_uncertainty_score":0.005069971},"labels":[],"label_agreement":null},{"id":"W2761745911","doi":"10.1038/s41541-017-0032-6","title":"Unmodified mRNA in LNPs constitutes a competitive technology for prophylactic vaccines","year":2017,"lang":"en","type":"article","venue":"npj Vaccines","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":260,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"","keywords":"Vaccination; Immune system; Immunology; Antigen; Chemokine; Virology; Antibody; Messenger RNA; Innate immune system; Biology; Medicine; Gene","score_opus":0.01815446600539048,"score_gpt":0.29061299997082657,"score_spread":0.27245853396543607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761745911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8013801,0.012558396,0.17464553,0.00083167886,0.00036973922,0.00021671994,0.00037786015,0.00042813877,0.009191766],"genre_scores_gemma":[0.93731105,0.0038744246,0.0519307,0.00025033244,0.000121503814,0.00015248032,0.0003457397,0.00009875948,0.005914935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996437,0.00008745944,0.00002255071,0.00007810233,0.00012903019,0.000039204697],"domain_scores_gemma":[0.9998567,0.000045077806,0.000045945413,0.000020854017,0.000019871657,0.000011490089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003501387,0.00038342297,0.00031447486,0.00015226501,0.00012056258,0.000335738,0.00022565675,0.0003862388,0.0007846547],"category_scores_gemma":[0.00037416338,0.00014423029,0.00020191217,0.000109724955,0.0004178205,0.00031792014,0.00024331172,0.00053425244,0.0005657894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033550572,0.000009011655,0.00007494913,0.00005776434,0.0000028821498,0.000042482778,0.000012046432,0.00017702763,0.99540174,0.00062948704,0.000028108472,0.003530922],"study_design_scores_gemma":[0.0000060374005,0.00035127514,0.00024936127,0.000007619946,0.0000139961385,0.00015379633,0.000009344704,0.00060184905,0.99199766,0.00018333009,0.006421557,0.000004290436],"about_ca_topic_score_codex":0.00015950456,"about_ca_topic_score_gemma":0.0002776543,"teacher_disagreement_score":0.0007846547,"about_ca_system_score_codex":0.00028814757,"about_ca_system_score_gemma":0.00028413924,"threshold_uncertainty_score":0.0026249886},"labels":[],"label_agreement":null},{"id":"W2782603494","doi":"10.1038/s41541-017-0040-6","title":"A heterogeneous human immunodeficiency virus-like particle (VLP) formulation produced by a novel vector system","year":2018,"lang":"en","type":"article","venue":"npj Vaccines","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Canadian Blood Services; National Institutes of Health; amfAR, The Foundation for AIDS Research","keywords":"Virology; Viremia; Integrase; Immune system; Virus; Pandemic; Immunology; Biology; Immunity; Virus-like particle; Human immunodeficiency virus (HIV); Medicine; Gene; Coronavirus disease 2019 (COVID-19); Genetics; Disease","score_opus":0.019336237240699508,"score_gpt":0.2735779364883074,"score_spread":0.2542416992476079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782603494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93196577,0.0018399516,0.06165442,0.00030097732,0.00015255394,0.0002930199,0.00040320412,0.00028754043,0.0031025787],"genre_scores_gemma":[0.96793807,0.0006177878,0.028096002,0.00009206939,0.000024911671,0.00008672849,0.00045825608,0.0000268265,0.0026593707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992466,0.000012983068,0.000007808506,0.000022616738,0.000020465632,0.000011383911],"domain_scores_gemma":[0.9999559,0.0000061834944,0.000019720663,0.000004428278,0.0000050611893,0.000008796593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014267054,0.0002716522,0.00011149147,0.00019588263,0.0001261697,0.0003728781,0.00027806356,0.00031905968,0.0006366349],"category_scores_gemma":[0.000105169805,0.0000915612,0.00015525614,0.00009706143,0.0001953034,0.00037490638,0.00016311997,0.00053092156,0.00024377147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040381576,0.00005171556,0.00010589951,0.000032398064,0.0000048692177,0.000047273476,0.000010338466,0.00013563252,0.9953798,0.000582594,0.00008628089,0.0035228038],"study_design_scores_gemma":[0.000020742873,0.00059747853,0.0005527331,0.0000061967808,0.000016615202,0.00025047697,0.000008694844,0.0015422676,0.9926763,0.000091891445,0.0042311144,0.00000565045],"about_ca_topic_score_codex":0.00021952513,"about_ca_topic_score_gemma":0.00017708927,"teacher_disagreement_score":0.0006366349,"about_ca_system_score_codex":0.00024053252,"about_ca_system_score_gemma":0.00019089633,"threshold_uncertainty_score":0.0021297932},"labels":[],"label_agreement":null},{"id":"W2784183730","doi":"10.1038/s41541-017-0043-3","title":"Humoral and cell-mediated immune responses to H5N1 plant-made virus-like particle vaccine are differentially impacted by alum and GLA-SE adjuvants in a Phase 2 clinical trial","year":2018,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Medicago (Canada); Caprion (Canada); McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Alum; Immune system; Adjuvant; Virology; Virus-like particle; Biology; Immunology; Microbiology; Chemistry; Recombinant DNA; Biochemistry; Gene","score_opus":0.03056322054161581,"score_gpt":0.34042575869099373,"score_spread":0.3098625381493779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784183730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963192,0.00081372185,0.00035622742,0.00015497878,0.00007099338,0.0014681753,0.00026462047,0.000034852885,0.00051729794],"genre_scores_gemma":[0.99259466,0.0008208593,0.0011064351,0.0004210526,0.00009931445,0.001863556,0.00067533186,0.00001525102,0.0024035247],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9995134,0.00023991599,0.000029249053,0.00006513056,0.000056125224,0.00009629079],"domain_scores_gemma":[0.9996189,0.000079684694,0.00008960798,0.000031199615,0.00004331196,0.0001373916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019719256,0.00097164325,0.0013310601,0.0002411222,0.00026981722,0.00067323993,0.00044859835,0.0010448915,0.0022427784],"category_scores_gemma":[0.0007012913,0.00034401013,0.00064883224,0.00021284331,0.0005797371,0.00059932185,0.00021245363,0.001988744,0.00047171206],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.54566044,0.11742155,0.0037118527,0.0008338251,0.00052317017,0.0002163115,0.00033612366,0.0012799433,0.257234,0.00022642706,0.0015712163,0.07098514],"study_design_scores_gemma":[0.08831739,0.8891008,0.004967859,0.000023369845,0.00015824393,0.00009495871,0.00004010786,0.00045363788,0.01526188,0.000082210405,0.0014850346,0.000014486786],"about_ca_topic_score_codex":0.00022193698,"about_ca_topic_score_gemma":0.0004977598,"teacher_disagreement_score":0.0022427784,"about_ca_system_score_codex":0.00040690383,"about_ca_system_score_gemma":0.00073337083,"threshold_uncertainty_score":0.010428667},"labels":[],"label_agreement":null},{"id":"W2808217454","doi":"10.1038/s41541-018-0065-5","title":"Antibody targeting of a specific region of Pfs47 blocks Plasmodium falciparum malaria transmission","year":2018,"lang":"en","type":"article","venue":"npj Vaccines","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"National Institute of Allergy and Infectious Diseases; NHLBI Division of Intramural Research; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Plasmodium falciparum; Malaria; Virology; Antibody; Biology; Immunology","score_opus":0.015140703904147387,"score_gpt":0.24934613995862584,"score_spread":0.23420543605447847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808217454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983303,0.00022485854,0.00074322656,0.000031368018,0.000010088739,0.000013622143,0.000057455876,0.000026709577,0.0005622879],"genre_scores_gemma":[0.99843925,0.00016315811,0.00052516913,0.00002737072,0.0000067525457,0.000015472924,0.00016653947,0.0000075362645,0.0006486853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990857,0.00001627434,0.0000060502935,0.00001196555,0.000019819656,0.000037330723],"domain_scores_gemma":[0.9999151,0.000022899141,0.000019098112,0.0000069220446,0.000010164446,0.000025838486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012068036,0.0002461352,0.00019669886,0.000093163515,0.000086898806,0.00013387203,0.00017475517,0.00019903466,0.0011548041],"category_scores_gemma":[0.000116650066,0.00010195044,0.00014427802,0.000059322538,0.00013651063,0.00009550604,0.00008100441,0.0004035575,0.00028088555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012052736,0.00006098134,0.000112339876,0.000017783297,0.0000034100808,0.000017275015,0.0000045840416,0.00006239123,0.9989717,0.000034436194,0.000036373498,0.00055819907],"study_design_scores_gemma":[0.000051996336,0.001410228,0.003908984,0.0000069372095,0.000016065464,0.00017666997,0.0000103301545,0.0016995801,0.9913352,0.000024935745,0.0013567794,0.0000022429504],"about_ca_topic_score_codex":0.00044193715,"about_ca_topic_score_gemma":0.0004085645,"teacher_disagreement_score":0.0011548041,"about_ca_system_score_codex":0.00020771449,"about_ca_system_score_gemma":0.0001394345,"threshold_uncertainty_score":0.0038632154},"labels":[],"label_agreement":null},{"id":"W2809649622","doi":"10.1038/s41541-018-0067-3","title":"Selection and evaluation of an efficient method for the recovery of viral nucleic acids from complex biologicals","year":2018,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur; Sanofi","keywords":"Nucleic acid; DNA; Biology; DNA extraction; RNA; Computational biology; Polymerase chain reaction; Virology; Molecular biology; Biochemistry; Gene","score_opus":0.043632238018282817,"score_gpt":0.34410872588332975,"score_spread":0.30047648786504694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809649622","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7142437,0.0053123147,0.2734496,0.00030819842,0.00015722001,0.0023820451,0.00094327866,0.0007366734,0.0024668584],"genre_scores_gemma":[0.56162274,0.0041753924,0.42547032,0.0001865782,0.000072292794,0.0013539457,0.0031144093,0.000317252,0.0036870136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970523,0.00078365835,0.0002925222,0.0005152457,0.0011995432,0.00015674661],"domain_scores_gemma":[0.9984261,0.00047091785,0.00029696917,0.00016376704,0.00054411264,0.000098144425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028663778,0.001215836,0.00079315976,0.0011196752,0.0005007579,0.0010582503,0.0006843089,0.0011038918,0.00093675667],"category_scores_gemma":[0.0025140953,0.00046961597,0.0006183193,0.0006244158,0.00064345804,0.00072322297,0.0006835903,0.0007021035,0.0011214147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022209548,0.000048316793,0.00020412149,0.000115686766,0.000007541185,0.000024892213,0.000017972156,0.0001229033,0.996366,0.000037473557,0.000030125038,0.0030028063],"study_design_scores_gemma":[0.0000041541502,0.0002959523,0.0008102175,0.000015731457,0.000028787435,0.00012923688,0.000025805579,0.0010279132,0.9961134,0.000023435801,0.0015095965,0.000015805474],"about_ca_topic_score_codex":0.00042297578,"about_ca_topic_score_gemma":0.0009342355,"teacher_disagreement_score":0.0028663778,"about_ca_system_score_codex":0.0004045702,"about_ca_system_score_gemma":0.00060185255,"threshold_uncertainty_score":0.015159011},"labels":[],"label_agreement":null},{"id":"W2891835629","doi":"10.1038/s41541-018-0085-1","title":"Author Correction: Selection and evaluation of an efficient method for the recovery of viral nucleic acids from complex biologicals","year":2018,"lang":"en","type":"erratum","venue":"npj Vaccines","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Nucleic acid; Selection (genetic algorithm); Computational biology; Computer science; Virology; Biology; Artificial intelligence; Biochemistry","score_opus":0.09524879102109107,"score_gpt":0.3520536584401799,"score_spread":0.2568048674190888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891835629","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015361287,0.0020879805,0.014584664,0.028878545,0.94268703,0.000072378534,0.0014944256,0.0011556724,0.0075031216],"genre_scores_gemma":[0.05591755,0.015273617,0.08694836,0.05160901,0.12940393,0.00031148028,0.009436155,0.009365168,0.6417348],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9924434,0.00086068903,0.0010755073,0.0010629074,0.004190443,0.00036697803],"domain_scores_gemma":[0.9653863,0.007128314,0.001103878,0.0018713025,0.023744885,0.0007653558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039965427,0.0016910101,0.0014503621,0.002407843,0.002703348,0.0027166826,0.00246596,0.0038632224,0.0341288],"category_scores_gemma":[0.046445485,0.00085325266,0.0010114932,0.001905428,0.0017483217,0.0020285172,0.0018870545,0.0070879566,0.024868403],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013983865,0.000039831062,0.0003065297,0.0004251772,0.000029950248,0.0011533902,0.00014438636,0.00031061863,0.0028711576,0.003425342,0.9461111,0.045042697],"study_design_scores_gemma":[0.000020813415,0.00003788773,0.0005984174,0.00021228752,0.00004758018,0.0015976473,0.000091701826,0.00061455526,0.0074737608,0.0011308604,0.98811615,0.000058320697],"about_ca_topic_score_codex":0.007855027,"about_ca_topic_score_gemma":0.010752779,"teacher_disagreement_score":0.0341288,"about_ca_system_score_codex":0.0024441597,"about_ca_system_score_gemma":0.0035606257,"threshold_uncertainty_score":0.11417228},"labels":[],"label_agreement":null},{"id":"W2900927973","doi":"10.1038/s41541-018-0091-3","title":"Pre-clinical evaluation of a P. berghei-based whole-sporozoite malaria vaccine candidate","year":2018,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Malaria Research and Control","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Wellcome Trust; Fundação para a Ciência e a Tecnologia; Bill and Melinda Gates Foundation","keywords":"Plasmodium berghei; Parasite hosting; Malaria; Circumsporozoite protein; Plasmodium falciparum; Biology; Virology; In vivo; Rodent; Malaria vaccine; Anopheles stephensi; Antibody; Immunization; Immunology; Biotechnology; Aedes aegypti","score_opus":0.03960282163426891,"score_gpt":0.3834959492660039,"score_spread":0.34389312763173496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900927973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98550594,0.004182151,0.006655791,0.00029012983,0.00007513795,0.00058705115,0.00051786826,0.0001289868,0.0020569058],"genre_scores_gemma":[0.99350727,0.001434208,0.0023468235,0.0001420443,0.000027366688,0.00019228528,0.00077236624,0.000014046355,0.0015636166],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982554,0.000054665816,0.000010864987,0.000023251592,0.00005491097,0.000030813397],"domain_scores_gemma":[0.99985325,0.000020158664,0.000038019294,0.000008886123,0.00004546926,0.000034206158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051407045,0.00043946033,0.00031635095,0.00012048753,0.00008664239,0.00025777676,0.00021739781,0.00028931227,0.0013847993],"category_scores_gemma":[0.00033449344,0.000095060095,0.00014560063,0.00007187528,0.00020812088,0.00016335657,0.00011992783,0.00045824345,0.00038435654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018398974,0.0012618336,0.0021979932,0.00043114452,0.00002710376,0.00019977811,0.00005353658,0.00055097253,0.95470977,0.00014373472,0.00066374853,0.03792062],"study_design_scores_gemma":[0.00060550706,0.15179047,0.023716,0.00009004411,0.00019808637,0.0017383915,0.00011428991,0.0025553284,0.797813,0.00018527462,0.021175863,0.00001774955],"about_ca_topic_score_codex":0.000227516,"about_ca_topic_score_gemma":0.0004026038,"teacher_disagreement_score":0.0013847993,"about_ca_system_score_codex":0.0001518208,"about_ca_system_score_gemma":0.00026848132,"threshold_uncertainty_score":0.004632592},"labels":[],"label_agreement":null},{"id":"W2913594819","doi":"10.1038/s41541-019-0098-4","title":"OVX836 a recombinant nucleoprotein vaccine inducing cellular responses and protective efficacy against multiple influenza A subtypes","year":2019,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"École Normale Supérieure de Lyon; Centre National de la Recherche Scientifique; Institut National de la Santé et de la Recherche Médicale; Université Claude Bernard Lyon 1; Agence Nationale de la Recherche","keywords":"Immunogenicity; Nucleoprotein; Virology; Immunization; Influenza vaccine; CD8; Immunology; Viral load; Biology; Influenza A virus; Immunity; Recombinant DNA; Antigen; Virus; Immune system; Gene","score_opus":0.04710321208070543,"score_gpt":0.329116898612898,"score_spread":0.28201368653219255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913594819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99712163,0.00070349744,0.000772727,0.000042726042,0.000021484453,0.000042687796,0.00020206765,0.00003242475,0.0010606238],"genre_scores_gemma":[0.9950128,0.00057845644,0.0016693189,0.00005145499,0.000014555559,0.000038247035,0.00043343828,0.0000105032495,0.0021910768],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999163,0.000010953328,0.000007994573,0.00002297196,0.00001820293,0.000023544597],"domain_scores_gemma":[0.9999505,0.0000067898895,0.000014644707,0.0000059624035,0.0000061389355,0.000016018395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011442805,0.00028200314,0.00026820242,0.00013350566,0.00010037354,0.00018166078,0.00010184725,0.00030845214,0.00093187124],"category_scores_gemma":[0.00007216847,0.00010161229,0.00016932565,0.00010511296,0.00018180876,0.00016267481,0.000118012336,0.00058007456,0.00022533597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021730509,0.00011687936,0.00017688358,0.000038675164,0.0000030479086,0.000022341284,0.000010666966,0.000057018537,0.99690515,0.000040225892,0.000030477739,0.0023811427],"study_design_scores_gemma":[0.00015902371,0.007408808,0.00924182,0.000015242074,0.000028879667,0.0005773687,0.000032649794,0.0006899307,0.97918814,0.00006906973,0.0025842823,0.000004837373],"about_ca_topic_score_codex":0.00028946207,"about_ca_topic_score_gemma":0.0003968108,"teacher_disagreement_score":0.00093187124,"about_ca_system_score_codex":0.00015058406,"about_ca_system_score_gemma":0.00017509426,"threshold_uncertainty_score":0.0031173825},"labels":[],"label_agreement":null},{"id":"W2920023727","doi":"10.1038/s41541-019-0104-x","title":"A recombinant vesicular stomatitis-based Lassa fever vaccine elicits rapid and long-term protection from lethal Lassa virus infection in guinea pigs","year":2019,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada; University of Manitoba","keywords":"Lassa virus; Lassa fever; Virology; Vesicular stomatitis virus; Vaccination; Biology; Virus; Immunology; Immunity; Vesicular Stomatitis; Medicine; Immune system","score_opus":0.020752786343990266,"score_gpt":0.29075398693067134,"score_spread":0.2700012005866811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920023727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99926215,0.000116033756,0.0003329352,0.000021397214,0.000011360725,0.000015084454,0.000046853136,0.000014340786,0.00017984005],"genre_scores_gemma":[0.9979248,0.00021301018,0.00066150073,0.000045358112,0.0000093307635,0.000036473455,0.00026613454,0.0000070528145,0.00083630654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998611,0.000026082034,0.000010916507,0.000028941717,0.00002168927,0.000051156174],"domain_scores_gemma":[0.99984396,0.000030657207,0.000047385827,0.00001732091,0.000013075045,0.000047530568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026980438,0.00044685876,0.0003026535,0.00021258715,0.00009669155,0.00023516337,0.00020196223,0.00049686123,0.0004948822],"category_scores_gemma":[0.0001560563,0.00018196208,0.000322093,0.00006476972,0.0002508522,0.00024613287,0.0001661338,0.00082063477,0.00017591071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002564496,0.00020497895,0.0003565992,0.000022174725,0.0000071228656,0.000040415172,0.000020625226,0.00008972888,0.9981793,0.000020247604,0.000016818236,0.00078556605],"study_design_scores_gemma":[0.00023515291,0.046699304,0.036234323,0.00003670081,0.000078306795,0.00070590666,0.00012840898,0.0014454314,0.91305095,0.000102395694,0.001264546,0.00001861193],"about_ca_topic_score_codex":0.00030508995,"about_ca_topic_score_gemma":0.00047378047,"teacher_disagreement_score":0.00049686123,"about_ca_system_score_codex":0.00018011866,"about_ca_system_score_gemma":0.00016500439,"threshold_uncertainty_score":0.001655519},"labels":[],"label_agreement":null},{"id":"W2920306597","doi":"10.1038/s41541-019-0102-z","title":"Single dose of DPX-rPA, an enhanced-delivery anthrax vaccine formulation, protects against a lethal Bacillus anthracis spore inhalation challenge","year":2019,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Defence Research and Development Canada; Parks Canada","funders":"Biomedical Advanced Research and Development Authority; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Battelle; U.S. Department of Health and Human Services","keywords":"Bacillus anthracis; Anthrax vaccines; Inhalation; Microbiology; Spore; Chemistry; Medicine; Biology; Immunization; Immunology; Bacteria; Immune system","score_opus":0.01586737432386108,"score_gpt":0.26223147780087397,"score_spread":0.24636410347701287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920306597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963827,0.0009389629,0.0014494632,0.00006049062,0.0000867018,0.0001041306,0.00014470442,0.00009470735,0.0007382255],"genre_scores_gemma":[0.9946827,0.00063272467,0.0019217107,0.00005669563,0.00003678687,0.00007097674,0.00037005555,0.000012816164,0.002215549],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972624,0.00003777648,0.00002496373,0.00007201704,0.000079754,0.000059324742],"domain_scores_gemma":[0.9998392,0.00002160788,0.000055840697,0.000016995598,0.0000230158,0.000043328073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002637659,0.0006169586,0.0005978454,0.00029200132,0.0001262111,0.0002511286,0.0003216726,0.0005929218,0.0012752673],"category_scores_gemma":[0.00021275283,0.00019878603,0.00028887484,0.00011616211,0.00022671909,0.00028762443,0.00016891428,0.0010835407,0.0003672188],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045627414,0.000664158,0.00016528623,0.00006544835,0.000011608832,0.00003172357,0.0000136421495,0.00009666166,0.9951315,0.000025539057,0.00006837148,0.0032697348],"study_design_scores_gemma":[0.00014213627,0.027591463,0.005141464,0.00002359675,0.00005309107,0.00030600876,0.00002702704,0.0010016825,0.9641042,0.000022856015,0.0015788492,0.0000076127344],"about_ca_topic_score_codex":0.0003914189,"about_ca_topic_score_gemma":0.00045499156,"teacher_disagreement_score":0.0012752673,"about_ca_system_score_codex":0.00018495097,"about_ca_system_score_gemma":0.00021620364,"threshold_uncertainty_score":0.0042662024},"labels":[],"label_agreement":null},{"id":"W2946780045","doi":"10.1038/s41541-019-0111-y","title":"Plant-derived virus-like particle vaccines drive cross-presentation of influenza A hemagglutinin peptides by human monocyte-derived macrophages","year":2019,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal General Hospital; McGill University; Medicago (Canada); McGill University Health Centre","funders":"Canadian Institutes of Health Research; McGill University Health Centre; Génome Québec; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Endosome; Endocytosis; Hemagglutinin (influenza); Virus-like particle; Pinocytosis; Immunogenicity; Antigen presentation; Biology; Antigen; Antigen processing; Virology; MHC class II; Virus; Immune system; Influenza A virus; Cell biology; T cell; Intracellular; Major histocompatibility complex; Cell; Immunology; Biochemistry","score_opus":0.015009705050368324,"score_gpt":0.2960463317496589,"score_spread":0.2810366266992906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946780045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969022,0.00036155933,0.001459277,0.00005776409,0.000020432553,0.000028090151,0.00027615324,0.000025952575,0.0008685951],"genre_scores_gemma":[0.99549663,0.00020980128,0.0020214443,0.000060849936,0.0000073318056,0.00003821392,0.00030591505,0.000007404631,0.0018523093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999012,0.000014872041,0.000007715675,0.000020411491,0.000017586042,0.00003810915],"domain_scores_gemma":[0.99995685,0.000007661987,0.000008624716,0.00000692129,0.000010895386,0.000009131243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013650308,0.00016384154,0.00015202738,0.00006947048,0.000093386334,0.00020253417,0.000093316805,0.00019473997,0.00097257266],"category_scores_gemma":[0.00004850422,0.00010295024,0.00019937978,0.00006748855,0.000074326585,0.00007369675,0.00015258694,0.00039070888,0.0006202615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007827343,0.00002231484,0.00020254776,0.000021344307,0.0000020755874,0.000036438625,0.000017698003,0.000027387297,0.9989248,0.000050358343,0.00004670244,0.0005701412],"study_design_scores_gemma":[0.00002182654,0.0004922861,0.005912969,0.0000068443696,0.000009678756,0.00015303039,0.000072639225,0.001657194,0.9892898,0.000055208697,0.0023245648,0.000003956264],"about_ca_topic_score_codex":0.00047330625,"about_ca_topic_score_gemma":0.0006388677,"teacher_disagreement_score":0.00097257266,"about_ca_system_score_codex":0.00014997734,"about_ca_system_score_gemma":0.00012241365,"threshold_uncertainty_score":0.0032535791},"labels":[],"label_agreement":null},{"id":"W2996703088","doi":"10.1038/s41541-019-0148-y","title":"Identification of antigens presented by MHC for vaccines against tuberculosis","year":2020,"lang":"en","type":"article","venue":"npj Vaccines","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Oxford; University of Alberta; Wellcome Trust; Wellcome","keywords":"Antigen; Tuberculosis; Identification (biology); Virology; Immunology; Major histocompatibility complex; Computational biology; Medicine; Biology; Pathology","score_opus":0.013864856231964272,"score_gpt":0.24447701040292721,"score_spread":0.23061215417096295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996703088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98589885,0.0071547716,0.0051979376,0.00015630448,0.000115265655,0.00008866325,0.00050617685,0.00005504029,0.00082693336],"genre_scores_gemma":[0.98479617,0.0026302042,0.009553831,0.00015193381,0.00004761794,0.00006802552,0.0011458093,0.000021396974,0.0015849988],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987507,0.000023036171,0.000009064195,0.00003018124,0.000034888195,0.000027665004],"domain_scores_gemma":[0.9999021,0.000022061942,0.00002749345,0.000010579027,0.000018467983,0.000019217625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020299685,0.0004945009,0.00029275983,0.0003236228,0.00011614273,0.0002693623,0.00017318923,0.0003621612,0.001303312],"category_scores_gemma":[0.00014517516,0.00011909295,0.0003407994,0.00020958432,0.0001355204,0.00020946967,0.00021948537,0.00051855476,0.00054469507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007649948,0.000020233589,0.00034996957,0.00004820489,0.000004989311,0.000019860829,0.0000029506384,0.000041388546,0.99778533,0.000017343536,0.000030259695,0.0016029659],"study_design_scores_gemma":[0.00003526532,0.001128587,0.012310027,0.000041934712,0.000084242936,0.0007285049,0.000029737015,0.0011369729,0.9785084,0.00011553441,0.0058743036,0.0000065218105],"about_ca_topic_score_codex":0.000087544315,"about_ca_topic_score_gemma":0.00009040419,"teacher_disagreement_score":0.001303312,"about_ca_system_score_codex":0.0002025842,"about_ca_system_score_gemma":0.00012464612,"threshold_uncertainty_score":0.00436002},"labels":[],"label_agreement":null},{"id":"W3011663072","doi":"10.1038/s41541-020-0173-x","title":"Antibody response of a particle-inducing, liposome vaccine adjuvant admixed with a Pfs230 fragment","year":2020,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Malaria Research and Control","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Global Health Innovative Technology Fund; McGill University","keywords":"Adjuvant; Alum; Antigen; Avidity; Biology; Antibody; Immunization; Liposome; Plasmodium falciparum; Malaria vaccine; Virology; Microbiology; Immunology; Biochemistry; Chemistry; Malaria","score_opus":0.019247592902080047,"score_gpt":0.29830089380835584,"score_spread":0.2790533009062758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011663072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99813396,0.00032279512,0.0006816493,0.00003409589,0.00002854821,0.000033208944,0.00012932537,0.00003186584,0.0006046264],"genre_scores_gemma":[0.9977902,0.00019129187,0.0006382063,0.000059560254,0.0000113432425,0.000020441881,0.00029574113,0.000008348929,0.0009848882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986565,0.000022808825,0.000007941207,0.0000286971,0.000028675351,0.000046079047],"domain_scores_gemma":[0.9998436,0.000049959548,0.000023862305,0.000009645906,0.00003130897,0.000041535714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023580328,0.00040733055,0.00019874831,0.00018501446,0.000086431624,0.00017288499,0.00016603102,0.00047123185,0.00090877275],"category_scores_gemma":[0.00026507457,0.00012847458,0.0001750919,0.00010492689,0.00011888406,0.00013705033,0.00011657724,0.00069719506,0.00034227062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000167748,0.00008857412,0.00016286022,0.000021561125,0.0000054654156,0.000016468532,0.0000102161275,0.00010625619,0.99885046,0.000017509425,0.000028375507,0.0005244338],"study_design_scores_gemma":[0.00005658636,0.0033189717,0.003793759,0.0000077174955,0.00002825345,0.000118348806,0.000014246819,0.0017403334,0.9901664,0.000020304658,0.0007298087,0.000005351119],"about_ca_topic_score_codex":0.0015090895,"about_ca_topic_score_gemma":0.0008399628,"teacher_disagreement_score":0.0015090895,"about_ca_system_score_codex":0.00037443242,"about_ca_system_score_gemma":0.00022711007,"threshold_uncertainty_score":0.003040135},"labels":[],"label_agreement":null},{"id":"W3036876052","doi":"10.1038/s41541-020-0197-2","title":"WHO informal consultation on the guidelines for evaluation of the quality, safety, and efficacy of DNA vaccines, Geneva, Switzerland, December 2019","year":2020,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Health Canada","funders":"U.S. Food and Drug Administration; World Health Organization","keywords":"Blueprint; Guideline; Standardization; Quality (philosophy); Medicine; Risk analysis (engineering); Engineering management; Business; Engineering; Computer science; Pathology","score_opus":0.13820188122314042,"score_gpt":0.4311755388879413,"score_spread":0.2929736576648009,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036876052","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014268084,0.06681969,0.0052712886,0.7468261,0.047445554,0.0012818475,0.0061045317,0.0006515967,0.12417257],"genre_scores_gemma":[0.022596482,0.07240863,0.020730596,0.43403542,0.02177851,0.003432903,0.012988183,0.0012277629,0.41080147],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9827267,0.007601675,0.002637132,0.0008067853,0.0044378,0.0017898759],"domain_scores_gemma":[0.9824572,0.0063053523,0.0015503467,0.0007282208,0.0072605275,0.0016983408],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.021888738,0.0015922276,0.0009893017,0.002326133,0.001685578,0.005055516,0.0023693994,0.010781531,0.027330285],"category_scores_gemma":[0.03050564,0.0008144342,0.0013768473,0.0018046665,0.0028670044,0.0025410869,0.00394962,0.007362919,0.014280323],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025097439,0.00001786264,0.0002537284,0.00029281853,0.0000046540986,0.00019277325,0.00034572574,0.00005158444,0.00027486408,0.0017687186,0.97111815,0.025654104],"study_design_scores_gemma":[0.000013926616,0.000013983336,0.00074049813,0.0010109249,0.000005807681,0.00013653519,0.00025721636,0.000039662194,0.00015928004,0.0005890794,0.9970182,0.000014968233],"about_ca_topic_score_codex":0.04133306,"about_ca_topic_score_gemma":0.045022637,"teacher_disagreement_score":0.97811127,"about_ca_system_score_codex":0.008705926,"about_ca_system_score_gemma":0.026226863,"threshold_uncertainty_score":0.11576009},"labels":[],"label_agreement":null},{"id":"W3042453338","doi":"10.1038/s41541-020-0207-4","title":"Sensitivity and breadth of detection of high-throughput sequencing for adventitious virus detection","year":2020,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Interface Biologics (Canada); Health Canada; Sanofi (Canada)","funders":"National Institute of Allergy and Infectious Diseases; Sanofi Pasteur; National Institutes of Health; Sanofi","keywords":"Biology; Genome; Virus; Virology; Matrix (chemical analysis); Computational biology; Gene; Genetics; Chemistry; Chromatography","score_opus":0.038111604604103774,"score_gpt":0.2490365073925699,"score_spread":0.21092490278846615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042453338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.729952,0.003014163,0.25797197,0.00038286956,0.00018255488,0.00040442558,0.0016227558,0.0015476827,0.004921718],"genre_scores_gemma":[0.8504134,0.0010264071,0.1439854,0.00023130166,0.00004952107,0.00025413357,0.001069602,0.00009501496,0.0028752116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966407,0.0011090471,0.0001825806,0.0006177397,0.0012777746,0.00017214082],"domain_scores_gemma":[0.99696106,0.0017796409,0.00029033297,0.0002415241,0.00057740376,0.00015007376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026499236,0.000776599,0.0005734802,0.0007039889,0.00034595202,0.00092116016,0.00049135054,0.00093525654,0.0012326315],"category_scores_gemma":[0.0034581153,0.0004557258,0.00035907363,0.00032883152,0.0006341212,0.0005540377,0.000532762,0.0007484401,0.00063135027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004769694,0.000014769074,0.0015567463,0.00005020314,0.000014282128,0.000014843021,0.00003317406,0.0003455079,0.9950041,0.00005437985,0.000071889786,0.0027925198],"study_design_scores_gemma":[0.0000041235285,0.00017498495,0.007289917,0.000013852411,0.00003255356,0.00031582353,0.000050426766,0.008015576,0.98245806,0.0001126862,0.0015132403,0.000018870081],"about_ca_topic_score_codex":0.00096409285,"about_ca_topic_score_gemma":0.0024262213,"teacher_disagreement_score":0.0026499236,"about_ca_system_score_codex":0.0003784618,"about_ca_system_score_gemma":0.000406219,"threshold_uncertainty_score":0.014014304},"labels":[],"label_agreement":null},{"id":"W3044293791","doi":"10.1038/s41541-020-00214-2","title":"Contagious Bovine and Caprine Pleuropneumonia: a research community’s recommendations for the development of better vaccines","year":2020,"lang":"en","type":"review","venue":"npj Vaccines","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Infectious Diseases Centre","funders":"International Development Research Centre; University of Bern; Department for International Development; Bill and Melinda Gates Foundation; National Science Foundation","keywords":"Contagious bovine pleuropneumonia; Pleuropneumonia; Mycoplasma mycoides; Mycoplasma; Vaccination; Contagious disease; Biology; Virology; Disease; Immunology; Medicine; Microbiology","score_opus":0.19527811852348997,"score_gpt":0.429463818084885,"score_spread":0.234185699561395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044293791","genre_codex":"commentary","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014796085,0.45741376,0.008733337,0.50477487,0.01720472,0.00050063577,0.00063343835,0.00045898135,0.008800692],"genre_scores_gemma":[0.025447816,0.69020504,0.078157924,0.17529178,0.013193285,0.0021424273,0.0016806693,0.00020735661,0.013673669],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9906419,0.004820577,0.0010151254,0.0006484219,0.0018689311,0.0010049959],"domain_scores_gemma":[0.94474703,0.01965679,0.0033712308,0.0020000262,0.022892036,0.007332958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.028877653,0.001574799,0.0020662458,0.0027796968,0.0011337633,0.004717906,0.0033869108,0.011879383,0.014676413],"category_scores_gemma":[0.03565028,0.00060390704,0.0024238972,0.0018607174,0.002755309,0.007924659,0.0034087868,0.010451209,0.005053823],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035753005,0.00075963105,0.0016943108,0.008344992,0.00018153609,0.0006038417,0.000634569,0.001251176,0.004602808,0.018120963,0.42582065,0.5376279],"study_design_scores_gemma":[0.00010492171,0.00038646077,0.0015554716,0.01166305,0.00021598848,0.00028860586,0.0011634666,0.00050289376,0.0010215372,0.012998521,0.97002506,0.00007416742],"about_ca_topic_score_codex":0.0066215782,"about_ca_topic_score_gemma":0.0061745928,"teacher_disagreement_score":0.028877653,"about_ca_system_score_codex":0.002782216,"about_ca_system_score_gemma":0.02601894,"threshold_uncertainty_score":0.15272146},"labels":[],"label_agreement":null},{"id":"W3120401733","doi":"10.1038/s41541-020-00266-4","title":"Reduced immune responses to hepatitis B primary vaccination in obese individuals with nonalcoholic fatty liver disease (NAFLD)","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Ottawa Hospital; University of Alberta; University of Calgary","funders":"CIHR Skin Research Training Centre; Canadian Institutes of Health Research; University of Calgary; Government of Canada; GlaxoSmithKline","keywords":"Medicine; Nonalcoholic fatty liver disease; Internal medicine; Hepatitis B; Gastroenterology; Hepatitis B virus; Immune system; Fatty liver; Obesity; Immunology; Hepatitis B vaccine; Vaccination; Cirrhosis; Disease; Virus; HBsAg","score_opus":0.016155946992762987,"score_gpt":0.2748420001734121,"score_spread":0.2586860531806491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120401733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996892,0.000086042666,0.000017750235,0.00001326698,0.0000028042239,0.0000037529599,0.000022424625,0.0000014003499,0.00016332422],"genre_scores_gemma":[0.9996401,0.00003620919,0.000027682729,0.000020626492,0.0000034776547,0.0000035131056,0.000053853804,4.3859308e-7,0.00021411343],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99994624,0.000011687382,0.000004244304,0.000009723355,0.000009018347,0.000018973062],"domain_scores_gemma":[0.9998652,0.000017515698,0.000036836616,0.0000062103363,0.000016846032,0.00005739951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017810836,0.00016305,0.00016938474,0.000198123,0.00022571185,0.00019737163,0.00006117582,0.00015422227,0.0018680763],"category_scores_gemma":[0.00039672738,0.00008657474,0.00010668015,0.000111435045,0.00013123499,0.000098628145,0.00012636585,0.00020601468,0.00018546681],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004368299,0.00056791905,0.95398664,0.000070236565,0.000050391118,0.00026016557,0.00025029428,0.00006464667,0.02602081,0.00003185912,0.0002794856,0.014049171],"study_design_scores_gemma":[0.000039103867,0.0011278288,0.9975949,0.0000064550586,0.00002132872,0.00023765187,0.00012253223,0.00007957812,0.0005182395,0.000016329983,0.00023439666,0.0000016784659],"about_ca_topic_score_codex":0.0036833743,"about_ca_topic_score_gemma":0.0045538237,"teacher_disagreement_score":0.0036833743,"about_ca_system_score_codex":0.00012971082,"about_ca_system_score_gemma":0.00015563708,"threshold_uncertainty_score":0.0073239207},"labels":[],"label_agreement":null},{"id":"W3127821223","doi":"10.1038/s41541-021-00285-9","title":"Immunofocusing and enhancing autologous Tier-2 HIV-1 neutralization by displaying Env trimers on two-component protein nanoparticles","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Horizon 2020 Framework Programme; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation; European Commission; amfAR, The Foundation for AIDS Research; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Neutralization; Component (thermodynamics); Nanoparticle; Human immunodeficiency virus (HIV); Chemistry; Trimer; Virology; Nanotechnology; Materials science; Medicine; Virus; Organic chemistry; Physics","score_opus":0.010087365946160259,"score_gpt":0.2555159623107246,"score_spread":0.24542859636456435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127821223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99394166,0.00024418486,0.004724645,0.000022067637,0.0000093508625,0.000030296913,0.000028363715,0.000038049904,0.00096138654],"genre_scores_gemma":[0.9929898,0.00022894533,0.005529582,0.000032445656,0.000004249958,0.000018735818,0.00005608417,0.000010061131,0.001130107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993,0.000009447289,0.0000033520757,0.000015496664,0.00002218309,0.000019527954],"domain_scores_gemma":[0.9999658,0.0000061384258,0.000009852792,0.000003661191,0.0000061663895,0.000008294564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000100044446,0.00030354064,0.00010367215,0.00013405112,0.000060079954,0.00018485013,0.00013659566,0.00022624704,0.00034977688],"category_scores_gemma":[0.000071516675,0.00009875123,0.00014533458,0.000056224842,0.00011144365,0.00013522466,0.00015609559,0.0001997299,0.00012822845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013794793,0.000015363703,0.000049888848,0.0000083496525,0.0000011836938,0.000008696427,0.000006027844,0.000094666444,0.9991431,0.000032794283,0.0000109512575,0.0006151994],"study_design_scores_gemma":[0.0000059271542,0.0003473045,0.0009187745,0.0000019548029,0.00000660208,0.00007623404,0.000008690644,0.0017856141,0.99632806,0.000016150656,0.0005024773,0.000002211827],"about_ca_topic_score_codex":0.00055151084,"about_ca_topic_score_gemma":0.0010062328,"teacher_disagreement_score":0.00055151084,"about_ca_system_score_codex":0.00019128005,"about_ca_system_score_gemma":0.00010398641,"threshold_uncertainty_score":0.0013878942},"labels":[],"label_agreement":null},{"id":"W3139154487","doi":"10.1038/s41541-021-00299-3","title":"AS03-adjuvanted H7N9 inactivated split virion vaccines induce cross-reactive and protective responses in ferrets","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GlaxoSmithKline (Canada); Nexen (Canada)","funders":"National Institute of Allergy and Infectious Diseases; Biomedical Advanced Research and Development Authority; Erasmus Medisch Centrum; U.S. Department of Health and Human Services","keywords":"Virology; Immunization; Vaccination; Biology; Medicine; Antibody; Immunology","score_opus":0.07424591612627965,"score_gpt":0.40810194477358364,"score_spread":0.333856028647304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139154487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984156,0.00050176866,0.00056027074,0.000039892704,0.000037465437,0.000045859157,0.000057175283,0.000023425426,0.00031845528],"genre_scores_gemma":[0.99785125,0.00036563387,0.0006169033,0.00010138926,0.000020217703,0.000053379852,0.00021295609,0.0000064072165,0.0007719179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976,0.000037022208,0.000021740087,0.00006081351,0.000053679298,0.000066883375],"domain_scores_gemma":[0.9998727,0.000019982273,0.000039622526,0.000012451039,0.00002756276,0.000027781294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029349703,0.0005878138,0.00037738617,0.0003579683,0.000116001946,0.00025586758,0.00030707134,0.0005536537,0.00044579236],"category_scores_gemma":[0.00025243402,0.00014035907,0.0004517361,0.00007815216,0.0002701243,0.00037424295,0.00017027132,0.00075968285,0.00014645545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006121594,0.00033454757,0.0006344299,0.00008188743,0.000020383468,0.00006155499,0.00005094631,0.00017551644,0.9954953,0.000045414814,0.000066945635,0.0024210082],"study_design_scores_gemma":[0.00015918307,0.020182144,0.021014016,0.000038848328,0.00012823012,0.00048168984,0.00016405777,0.0023608252,0.95325005,0.0001478361,0.0020564536,0.000016710657],"about_ca_topic_score_codex":0.0006837317,"about_ca_topic_score_gemma":0.0008597567,"teacher_disagreement_score":0.0006837317,"about_ca_system_score_codex":0.00038378648,"about_ca_system_score_gemma":0.00018968614,"threshold_uncertainty_score":0.0027845502},"labels":[],"label_agreement":null},{"id":"W3152943909","doi":"10.1038/s41541-021-00327-2","title":"Strategy for COVID-19 vaccination in India: the country with the second highest population and number of cases","year":2021,"lang":"en","type":"review","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":249,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Neurotrauma Foundation","funders":"","keywords":"Vaccination; Government (linguistics); Pandemic; Coronavirus disease 2019 (COVID-19); Cold chain; Business; Population; Health care; Economic growth; Medicine; Environmental health; Virology; Engineering; Economics","score_opus":0.08114627928095852,"score_gpt":0.4268541531239819,"score_spread":0.34570787384302337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3152943909","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019824717,0.9945269,0.00015685438,0.0023958771,0.00062289723,0.000023348166,0.000093270806,0.00003183182,0.0019507101],"genre_scores_gemma":[0.0021884202,0.99463034,0.0003417258,0.0015314518,0.00026420545,0.000025774701,0.00015022061,0.0000037124507,0.0008642349],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99974555,0.000050792347,0.000044563574,0.00003120485,0.000085255924,0.00004268131],"domain_scores_gemma":[0.9996074,0.00014464498,0.000059743088,0.000011347874,0.0001370328,0.000039956478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079695316,0.00074545655,0.0011000952,0.0027414567,0.00030148457,0.001138987,0.0013004025,0.0013351014,0.0041191536],"category_scores_gemma":[0.0010578335,0.00022965272,0.0009796629,0.0017318414,0.00043483937,0.0011632169,0.00070668804,0.002279723,0.0014773618],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011058894,0.000082369,0.0005065384,0.030607319,0.00017486209,0.00021091307,0.00009323933,0.00041386933,0.0008073806,0.0057105664,0.10148856,0.8597938],"study_design_scores_gemma":[0.000043166157,0.00013070666,0.0026896785,0.017154895,0.00038508084,0.0011845895,0.00015116872,0.00014274051,0.00042908877,0.0019289467,0.97572845,0.000031383363],"about_ca_topic_score_codex":0.0049224496,"about_ca_topic_score_gemma":0.0067714574,"teacher_disagreement_score":0.0049224496,"about_ca_system_score_codex":0.0013777812,"about_ca_system_score_gemma":0.0038576112,"threshold_uncertainty_score":0.013779938},"labels":[],"label_agreement":null},{"id":"W3159841217","doi":"10.1038/s41541-021-00322-7","title":"Quality by design modelling to support rapid RNA vaccine production against emerging infectious diseases","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Michael Smith Health Research BC","funders":"Engineering and Physical Sciences Research Council; Research Councils UK; Department of Health and Social Care; UK Research and Innovation","keywords":"Quality by Design; Bioprocess; Critical quality attributes; Quality (philosophy); Computer science; Biochemical engineering; Computational biology; Automation; Production (economics); Biotechnology; Risk analysis (engineering); Engineering; Biology; Medicine; Operations management; Downstream (manufacturing)","score_opus":0.020667128165411594,"score_gpt":0.292570713480631,"score_spread":0.2719035853152194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159841217","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024599478,0.00032165242,0.9694717,0.00016430386,0.000025227278,0.0001592105,0.00019331169,0.0002319017,0.004833145],"genre_scores_gemma":[0.59002906,0.0009278843,0.40253752,0.00010852831,0.000023085558,0.0010229008,0.00045921077,0.00019415967,0.004697755],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9991867,0.0003066285,0.000039512845,0.00010310889,0.0002758219,0.00008813594],"domain_scores_gemma":[0.99818206,0.001169063,0.00026345832,0.00010280208,0.00023915949,0.000043437492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024709266,0.0010895758,0.00093698245,0.00082559296,0.00034938514,0.0013874017,0.00077120244,0.000980358,0.0025548392],"category_scores_gemma":[0.0034097605,0.0007375382,0.0016507659,0.0005215684,0.00074553327,0.00067560456,0.0007642046,0.0009276174,0.00039274932],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014874533,0.000013656031,0.00022525332,0.00006448508,0.000011129741,0.000014185719,0.000015796362,0.9901063,0.0019439339,0.0045941635,0.00006102305,0.0029352708],"study_design_scores_gemma":[0.000010225867,0.00004398609,0.000074919175,0.000009168593,0.000010546417,0.000007392234,0.00000474711,0.9939626,0.0009530843,0.003996347,0.0009226512,0.000004386902],"about_ca_topic_score_codex":0.0037129826,"about_ca_topic_score_gemma":0.0031278043,"teacher_disagreement_score":0.0037129826,"about_ca_system_score_codex":0.0014629533,"about_ca_system_score_gemma":0.0020905014,"threshold_uncertainty_score":0.013067663},"labels":[],"label_agreement":null},{"id":"W3171383385","doi":"10.1038/s41541-021-00345-0","title":"Messenger RNA expressing PfCSP induces functional, protective immune responses against malaria in mice","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"Leids Universitair Medisch Centrum; U.S. Military Academy; United States Agency for International Development; Universiteit Leiden; U.S. Department of Defense","keywords":"Circumsporozoite protein; Malaria; Malaria vaccine; Virology; Plasmodium falciparum; Plasmodium berghei; Vaccination; Adjuvant; Immune system; Biology; Immunology; Population; Medicine; Environmental health","score_opus":0.020767431668188167,"score_gpt":0.2596979826707817,"score_spread":0.23893055100259353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3171383385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98063827,0.0014121006,0.01070287,0.00045385605,0.00013835993,0.00017009524,0.0010313577,0.00053961494,0.0049134376],"genre_scores_gemma":[0.97824585,0.001718044,0.008740413,0.00031557443,0.000056031033,0.00023802552,0.0011706243,0.00012998763,0.009385459],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997149,0.000040458053,0.0000247159,0.00007957744,0.0000730838,0.00006733848],"domain_scores_gemma":[0.999803,0.000029356048,0.00006750838,0.000027039392,0.000028200033,0.000044968394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004184794,0.0005196052,0.00030749117,0.00045335852,0.0001697343,0.00029856298,0.00029085466,0.0005124493,0.0011139038],"category_scores_gemma":[0.00018956624,0.00026712017,0.00027752566,0.00017285498,0.0004174803,0.00028160014,0.00015509561,0.0013308414,0.00055547757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016851061,0.00009462926,0.00005253622,0.000042419375,0.0000031293555,0.000027533539,0.000024382176,0.00006899858,0.99829835,0.00015500787,0.00006457218,0.0010000147],"study_design_scores_gemma":[0.00006804842,0.0019031292,0.001242535,0.00001741132,0.000016719616,0.00016279148,0.000028333736,0.0009833277,0.99224937,0.00012229236,0.0032000046,0.0000062013623],"about_ca_topic_score_codex":0.00039658142,"about_ca_topic_score_gemma":0.00065477117,"teacher_disagreement_score":0.0011139038,"about_ca_system_score_codex":0.00031931623,"about_ca_system_score_gemma":0.0003000091,"threshold_uncertainty_score":0.0037263632},"labels":[],"label_agreement":null},{"id":"W3191797180","doi":"10.1038/s41541-021-00367-8","title":"Oral vaccination stimulates neutrophil functionality and exerts protection in a Mycobacterium avium subsp. paratuberculosis infection model","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Immune responses and vaccinations","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"European Social Fund; Ministerio de Ciencia e Innovación; Euskal Herriko Unibertsitatea; Agriculture Funding Consortium; Alberta Agriculture and Forestry; European Regional Development Fund; Eusko Jaurlaritza; Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria","keywords":"Vaccination; Immunology; Paratuberculosis; Innate immune system; Immunity; Immune system; Biology; Peripheral blood mononuclear cell; Heterologous; Antigen; Microbiology; Medicine; Virology; Mycobacterium; In vitro","score_opus":0.023415667621181708,"score_gpt":0.2644240391951142,"score_spread":0.24100837157393248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3191797180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99793696,0.0008347418,0.00048465419,0.0000435601,0.000026341286,0.00003304322,0.0000656313,0.000023860111,0.0005512655],"genre_scores_gemma":[0.9964533,0.00060389854,0.0006798471,0.00003964894,0.000014890419,0.00006212068,0.00016424943,0.0000058075357,0.0019761962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999859,0.000029588766,0.000008967237,0.00003069983,0.000029581202,0.00004220764],"domain_scores_gemma":[0.9999304,0.000012268956,0.000018396679,0.000010371389,0.000007155545,0.00002150997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019263629,0.0003583989,0.0004111014,0.00009863303,0.00007830971,0.00015441637,0.00015204433,0.00024808623,0.0012057493],"category_scores_gemma":[0.00013055625,0.00008684115,0.00016205787,0.00004977383,0.00020250579,0.000168528,0.00014580696,0.0006350372,0.00021944269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015991868,0.00074755074,0.00040451981,0.000131397,0.0000070459537,0.00006019673,0.000037141912,0.00007552918,0.9919844,0.000044042463,0.00007136237,0.0048376727],"study_design_scores_gemma":[0.00022764405,0.026229385,0.016563449,0.00003631719,0.00005424312,0.000387652,0.00009398873,0.0010003018,0.95310396,0.00007882293,0.0022154115,0.000008818303],"about_ca_topic_score_codex":0.0002082918,"about_ca_topic_score_gemma":0.0004416723,"teacher_disagreement_score":0.0012057493,"about_ca_system_score_codex":0.00010841894,"about_ca_system_score_gemma":0.00014571896,"threshold_uncertainty_score":0.004033625},"labels":[],"label_agreement":null},{"id":"W3194928289","doi":"10.1038/s41541-021-00358-9","title":"Haplotype-resolved de novo assembly of the Vero cell line genome","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada; McGill University","keywords":"Vero cell; Biology; Genome; Virology; Gene; Virus; Genetics","score_opus":0.016412564206775178,"score_gpt":0.28170294926572514,"score_spread":0.26529038505895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3194928289","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31560355,0.0036050575,0.59759086,0.0006318366,0.00095942576,0.0008319977,0.055712916,0.012079344,0.0129849855],"genre_scores_gemma":[0.24789429,0.0020189595,0.59763694,0.00024098883,0.00008830361,0.0007502922,0.1411889,0.0046793823,0.005501878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968314,0.000060800714,0.000030955387,0.00010202286,0.00007878559,0.000044289558],"domain_scores_gemma":[0.9992182,0.0002731448,0.000103827944,0.00014178055,0.00020281719,0.000060106533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059537217,0.0010587702,0.000904,0.0010698996,0.000621884,0.0014490272,0.00068379554,0.0007176785,0.0030882119],"category_scores_gemma":[0.0023446688,0.0006240368,0.0012943181,0.0014516175,0.00032171246,0.00050529785,0.00062007527,0.0016484093,0.0025916423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010093658,0.00018580833,0.0065990975,0.0011669018,0.00016686371,0.0030480076,0.0011621142,0.029720455,0.87557644,0.0042143897,0.009379298,0.06777119],"study_design_scores_gemma":[0.00020606024,0.0008117579,0.021179402,0.00043574558,0.000534616,0.0020695743,0.0007847659,0.21711296,0.53579,0.007667411,0.21306872,0.00033894758],"about_ca_topic_score_codex":0.0044321823,"about_ca_topic_score_gemma":0.005810088,"teacher_disagreement_score":0.0044321823,"about_ca_system_score_codex":0.0005721012,"about_ca_system_score_gemma":0.0011455831,"threshold_uncertainty_score":0.010331094},"labels":[],"label_agreement":null},{"id":"W3195049653","doi":"10.1038/s41541-021-00373-w","title":"Relative effectiveness of influenza vaccines in elderly persons in the United States, 2012/2013-2017/2018 seasons","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Medicine; Confidence interval; Hazard ratio; Pneumonia; Influenza vaccine; Internal medicine; Immunization; Relative risk; Seasonal influenza; Pediatrics; Coronavirus disease 2019 (COVID-19); Immunology; Vaccination; Disease; Antigen","score_opus":0.06894206101019172,"score_gpt":0.3779831159701617,"score_spread":0.30904105495997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195049653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9703279,0.021792425,0.00035911013,0.00040468626,0.00009544628,0.000031473697,0.005521508,0.000018439074,0.001449059],"genre_scores_gemma":[0.9958626,0.0019053199,0.00021425007,0.00017389165,0.00006646273,0.000022048234,0.0016336489,0.000003869945,0.00011785132],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974016,0.0011835712,0.00041110042,0.00038534068,0.00049772573,0.000120619414],"domain_scores_gemma":[0.99567175,0.0018827281,0.0015098684,0.00028267477,0.00045192326,0.00020111066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0057390966,0.00026885967,0.0007916515,0.00070972554,0.0001547824,0.00058582996,0.0003024144,0.0003925139,0.00070010405],"category_scores_gemma":[0.011591133,0.00021684158,0.0017991294,0.00077556283,0.00015016495,0.00053287344,0.0003782324,0.0004361986,0.00012495386],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039837025,0.00009383269,0.96355337,0.00054001383,0.0054948935,0.000044999397,0.00006714278,0.0009201385,0.00035430968,0.00014587745,0.0012033152,0.023598345],"study_design_scores_gemma":[0.00018632185,0.0012878958,0.9908002,0.00012525769,0.0033984596,0.00018209737,0.00019258681,0.0016849601,0.00045694306,0.00012510523,0.0015431069,0.00001701083],"about_ca_topic_score_codex":0.005436913,"about_ca_topic_score_gemma":0.0064405794,"teacher_disagreement_score":0.0057390966,"about_ca_system_score_codex":0.0004007677,"about_ca_system_score_gemma":0.00026744048,"threshold_uncertainty_score":0.03035158},"labels":[],"label_agreement":null},{"id":"W3195126148","doi":"10.1038/s41541-021-00364-x","title":"Interplay of diverse adjuvants and nanoparticle presentation of native-like HIV-1 envelope trimers","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Horizon 2020 Framework Programme; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; European Commission; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Adjuvant; Trimer; Immunogenicity; Nanoparticle; Liposome; Antibody; Chemistry; Antibody response; Cross-presentation; Biophysics; Nanotechnology; Immunology; Materials science; Biology; Biochemistry; Antigen presentation; In vitro; Cytotoxic T cell","score_opus":0.017133930091120218,"score_gpt":0.2956482195555664,"score_spread":0.2785142894644462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195126148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997869,0.0006283006,0.00089748006,0.000034860164,0.000009479205,0.000020085132,0.000018122646,0.000014375526,0.00050814584],"genre_scores_gemma":[0.99710387,0.00043286438,0.0018861564,0.000042419317,0.000009617163,0.000014204763,0.000035014218,0.000008257765,0.00046745257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988914,0.000035734447,0.000008675167,0.000013155449,0.000020347965,0.0000328265],"domain_scores_gemma":[0.9998958,0.000050426144,0.000014424671,0.0000051397883,0.000014703156,0.000019492974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030735633,0.00024400726,0.00023658427,0.00016600317,0.000068266905,0.00028303938,0.00012409086,0.00018310398,0.000520213],"category_scores_gemma":[0.000297093,0.00010050543,0.00012739337,0.00006595572,0.00015014247,0.00024132642,0.00018685113,0.00025735388,0.000117785465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025931123,0.000072902105,0.00028644045,0.000052891442,0.000005394191,0.000029650259,0.0000114780905,0.00032169512,0.9962345,0.00007298956,0.000017333861,0.0026355335],"study_design_scores_gemma":[0.000031156116,0.0011013761,0.0012991356,0.000008796068,0.000024993942,0.00011533167,0.00002414534,0.002204938,0.99442434,0.000074333104,0.0006872922,0.000004175362],"about_ca_topic_score_codex":0.00015164356,"about_ca_topic_score_gemma":0.00032225365,"teacher_disagreement_score":0.000520213,"about_ca_system_score_codex":0.00013357557,"about_ca_system_score_gemma":0.00017620633,"threshold_uncertainty_score":0.0017402172},"labels":[],"label_agreement":null},{"id":"W3202451224","doi":"10.1038/s41541-021-00381-w","title":"Specific human cytomegalovirus signature detected in NK cell metabolic changes post vaccination","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Tsinghua-Berkeley Shenzhen institute; European Commission; Medical Research Council; National Institute for Health and Care Research; Wellcome Trust","keywords":"Immunology; Immune system; Vaccination; Human cytomegalovirus; Biology; Virology; Context (archaeology); Acquired immune system; Innate immune system; Hepatitis C virus; Virus","score_opus":0.011465792976510937,"score_gpt":0.2340653831421259,"score_spread":0.22259959016561498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202451224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808735,0.00048047665,0.00023250481,0.000022348437,0.000011511046,0.000014731644,0.00026780288,0.0000114289305,0.00087173807],"genre_scores_gemma":[0.9985879,0.00015289098,0.0001350785,0.000033023614,0.0000065565187,0.000017087357,0.00026760242,0.0000047640633,0.00079504185],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999311,0.000009560403,0.000003831807,0.000020286041,0.000010496724,0.000024778506],"domain_scores_gemma":[0.99991405,0.000013507091,0.000020512742,0.000008944746,0.000019162546,0.00002385641],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008071039,0.00012138795,0.00024323101,0.00018808038,0.00010309553,0.00022943997,0.000088066205,0.00021835258,0.0018242387],"category_scores_gemma":[0.00018822048,0.00007969276,0.00009373705,0.00012746871,0.00011186666,0.00013670133,0.00014782761,0.00026597557,0.00030986278],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002842163,0.00007681946,0.03800816,0.00006205202,0.000017293736,0.00044118773,0.00017520289,0.000093005816,0.94941926,0.000072375,0.0001298098,0.008662625],"study_design_scores_gemma":[0.00005272756,0.0022815592,0.7860372,0.000023539746,0.000065323744,0.002012033,0.0005451246,0.0010265831,0.2054693,0.00028829498,0.0021794606,0.00001883643],"about_ca_topic_score_codex":0.00035578868,"about_ca_topic_score_gemma":0.0004971348,"teacher_disagreement_score":0.0018242387,"about_ca_system_score_codex":0.00011980312,"about_ca_system_score_gemma":0.00007006988,"threshold_uncertainty_score":0.006102681},"labels":[],"label_agreement":null},{"id":"W3209113609","doi":"10.1038/s41541-021-00398-1","title":"Author Correction: Interplay of diverse adjuvants and nanoparticle presentation of native-like HIV-1 envelope trimers","year":2021,"lang":"en","type":"erratum","venue":"npj Vaccines","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Envelope (radar); Human immunodeficiency virus (HIV); Presentation (obstetrics); Nanoparticle; Virology; Nanotechnology; Materials science; Physics; Computer science; Medicine; Telecommunications","score_opus":0.019721668589514935,"score_gpt":0.30568674464895046,"score_spread":0.28596507605943555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209113609","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005334337,0.0018355313,0.0018409458,0.03968654,0.95185137,0.000020851507,0.00047144305,0.0003285401,0.0034313293],"genre_scores_gemma":[0.04675082,0.025982719,0.014123255,0.10332891,0.30437046,0.00020079443,0.0028263717,0.0027468558,0.4996697],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962107,0.0004770646,0.00060485693,0.00057336624,0.0018253691,0.0003086153],"domain_scores_gemma":[0.98516536,0.0042620874,0.00080270384,0.00074141705,0.008409396,0.0006191033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032221947,0.0018578662,0.0014322508,0.0020959845,0.0029379493,0.003085217,0.0024163532,0.0053715287,0.025876753],"category_scores_gemma":[0.029990772,0.0009074835,0.0011082002,0.0014991215,0.002168542,0.0020792086,0.0014828995,0.008696319,0.018965326],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010355454,0.000014583817,0.0001456024,0.00026648972,0.000021114462,0.0013387286,0.00009079064,0.0001376581,0.00063174043,0.0023833066,0.97835207,0.016514342],"study_design_scores_gemma":[0.000029128878,0.000035763787,0.00044606367,0.00026217464,0.000052754887,0.0030250442,0.00012671604,0.00037437334,0.0032337885,0.0017134685,0.9906545,0.00004625866],"about_ca_topic_score_codex":0.007190366,"about_ca_topic_score_gemma":0.008673899,"teacher_disagreement_score":0.025876753,"about_ca_system_score_codex":0.0030936392,"about_ca_system_score_gemma":0.003988058,"threshold_uncertainty_score":0.08656639},"labels":[],"label_agreement":null},{"id":"W3217290240","doi":"10.1038/s41541-021-00411-7","title":"A third SARS-CoV-2 spike vaccination improves neutralization of variants-of-concern","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; Fondation Bettencourt Schueller; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Universiteit van Amsterdam; Agence Nationale de la Recherche; Amsterdam University Medical Centers; Bill and Melinda Gates Foundation","keywords":"Spike (software development); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Neutralization; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Virology; Spike Protein; Vaccination; Medicine; Computer science; Outbreak; Virus; Infectious disease (medical specialty)","score_opus":0.05365433615127478,"score_gpt":0.363007579321681,"score_spread":0.3093532431704062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217290240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984517,0.00021813302,0.00052569306,0.00006544084,0.000057016772,0.000041349533,0.00009248286,0.000059064012,0.0004891069],"genre_scores_gemma":[0.9971296,0.00019991232,0.0009955255,0.0001358589,0.000026023114,0.00003771187,0.00036057865,0.000017328997,0.0010973639],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995932,0.000046566856,0.000026572345,0.00008288925,0.00009943049,0.00015136128],"domain_scores_gemma":[0.9996904,0.00006485361,0.00007720264,0.000046094527,0.000037308626,0.00008417673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002984304,0.00058323983,0.00084871054,0.00033969863,0.00019690434,0.00036603535,0.00032323273,0.00065953983,0.0013181317],"category_scores_gemma":[0.00042577134,0.00015151463,0.000481048,0.00016070342,0.0003108709,0.00044552665,0.0002201034,0.0016830731,0.00020765429],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001523336,0.002307701,0.0009939757,0.00008015662,0.000044857275,0.00006589871,0.000077399025,0.0002549297,0.9842976,0.00017273656,0.0002377496,0.009943692],"study_design_scores_gemma":[0.00037739886,0.03585879,0.018621169,0.000030390935,0.00012511006,0.000449075,0.00008931497,0.0018363674,0.9395914,0.00016528694,0.002830118,0.000025695617],"about_ca_topic_score_codex":0.0009900762,"about_ca_topic_score_gemma":0.0012682194,"teacher_disagreement_score":0.0013181317,"about_ca_system_score_codex":0.00042519296,"about_ca_system_score_gemma":0.00041244624,"threshold_uncertainty_score":0.0044095516},"labels":[],"label_agreement":null},{"id":"W4200522047","doi":"10.1038/s41541-021-00412-6","title":"Sex-specific effects of aging on humoral immune responses to repeated influenza vaccination in older adults","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Aging; Fonds de Recherche du Québec - Santé; Sanofi Pasteur; U.S. Department of Health and Human Services; National Institutes of Health; Milstein Medical Asian American Partnership Foundation; Sanofi; National Institute of Allergy and Infectious Diseases; Johns Hopkins University","keywords":"Vaccination; Immunology; Immune system; Medicine; Virology","score_opus":0.03659766101699529,"score_gpt":0.36116106729697295,"score_spread":0.32456340627997765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200522047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990621,0.00041678845,0.000034543915,0.000022724842,0.000009047261,0.0000032658845,0.00006968892,0.0000015394849,0.000380303],"genre_scores_gemma":[0.999522,0.00009424221,0.000023838687,0.000023305527,0.0000102037675,0.0000026005382,0.000048354552,8.5054313e-7,0.00027464592],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998124,0.000051468574,0.000015583104,0.000041188407,0.000027978227,0.00005134219],"domain_scores_gemma":[0.99904484,0.00021686582,0.0003708278,0.00008063043,0.0001059871,0.0001808241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005422604,0.00018224092,0.00021782129,0.00024254715,0.00012458219,0.00024000589,0.00009521368,0.00019070695,0.0013848302],"category_scores_gemma":[0.0017164333,0.00008540789,0.0002384737,0.00013430062,0.00012319777,0.00022145525,0.00019142182,0.00021383882,0.00015502686],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029907008,0.00019915368,0.9762532,0.000030105355,0.000118235155,0.00013065178,0.00026835373,0.00005303879,0.007439893,0.00003332645,0.000118002994,0.012365352],"study_design_scores_gemma":[0.0000035892517,0.00056539767,0.9990482,0.0000021614076,0.000017043385,0.00005049235,0.00005913961,0.000027366526,0.0001484197,0.0000090512585,0.000067980516,0.0000011259151],"about_ca_topic_score_codex":0.0009031443,"about_ca_topic_score_gemma":0.001548646,"teacher_disagreement_score":0.0013848302,"about_ca_system_score_codex":0.00008356845,"about_ca_system_score_gemma":0.00012356602,"threshold_uncertainty_score":0.0046327114},"labels":[],"label_agreement":null},{"id":"W4214514091","doi":"10.1038/s41541-022-00452-6","title":"Humoral immune responses to COVID-19 vaccination in people living with HIV receiving suppressive antiretroviral therapy","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; McGill University Health Centre; Ottawa Hospital; Simon Fraser University; Providence Health Care; University of British Columbia; HIV Legal Network; St. Paul's Hospital; Centre for Advancing Health Outcomes; AIDS Vancouver","funders":"Genome British Columbia; Michael Smith Health Research BC; Wellcome Trust; Simon Fraser University; Providence Health Care; British Columbia Centre for Disease Control; BCCDC Foundation for Public Health; U.S. Department of Health and Human Services","keywords":"Medicine; Vaccination; Immune system; Immunology; Viral load; Antibody; Lentivirus; Antiretroviral therapy; Human immunodeficiency virus (HIV); Humoral immunity; Internal medicine; Virology; Viral disease","score_opus":0.03293187295716175,"score_gpt":0.34726001737292417,"score_spread":0.3143281444157624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214514091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995584,0.00011672441,0.00002445895,0.000017502043,0.0000047078356,0.0000061965593,0.000052937903,0.0000016743168,0.00021726511],"genre_scores_gemma":[0.9997613,0.000026934647,0.00001679374,0.000028127655,0.000006370216,0.0000053123727,0.000050093877,3.2363678e-7,0.00010488143],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997856,0.00006428008,0.000021566682,0.00004078245,0.00003589516,0.00005192525],"domain_scores_gemma":[0.9993339,0.00018243452,0.00023455145,0.0000309323,0.000078306904,0.00013981592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038911615,0.00022186399,0.00029630944,0.00033816474,0.00028623367,0.00040017083,0.00012953766,0.00047338093,0.0013513982],"category_scores_gemma":[0.0019596207,0.00019266643,0.00022735834,0.0002654638,0.00023926444,0.00036932583,0.00021465308,0.00050799357,0.00018774818],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035987276,0.00010705742,0.99563795,0.0000187619,0.000037941383,0.00012049803,0.00021850254,0.000042925127,0.0009811347,0.000008902257,0.00006518216,0.0024013126],"study_design_scores_gemma":[0.000015109334,0.0009926128,0.9980763,0.000006722102,0.000025199099,0.00024240889,0.00023004238,0.00009719358,0.00016852617,0.00001303873,0.0001303016,0.0000026383793],"about_ca_topic_score_codex":0.001573432,"about_ca_topic_score_gemma":0.0012016526,"teacher_disagreement_score":0.001573432,"about_ca_system_score_codex":0.00015897995,"about_ca_system_score_gemma":0.00008701962,"threshold_uncertainty_score":0.0045208335},"labels":[],"label_agreement":null},{"id":"W4214886362","doi":"10.1038/s41541-022-00449-1","title":"Centrin-deficient Leishmania mexicana confers protection against New World cutaneous leishmaniasis","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Global Health Innovative Technology Fund","keywords":"Leishmania mexicana; Amastigote; Leishmania; Cutaneous leishmaniasis; Leishmaniasis; Biology; Leishmania major; Immunology; Immunogenicity; Cytokine; Leishmania tropica; Virology; Immune system; Parasite hosting","score_opus":0.03637937889199591,"score_gpt":0.2797422591567296,"score_spread":0.2433628802647337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214886362","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99698454,0.0004792019,0.000839028,0.00013640501,0.000029190189,0.000026047232,0.00052703614,0.000067943445,0.0009105],"genre_scores_gemma":[0.9955279,0.00026408624,0.0005453887,0.00006604801,0.0000072166417,0.000028725824,0.0006498953,0.000014447421,0.0028962088],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999161,0.000014657784,0.00000787985,0.000020386915,0.000018316867,0.000022658922],"domain_scores_gemma":[0.9998965,0.000012222691,0.000033498272,0.000011525282,0.000012944279,0.00003322409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008966198,0.00023522058,0.00017180483,0.00020206104,0.00012300514,0.00027183618,0.00019287982,0.00031385396,0.002125398],"category_scores_gemma":[0.00008296618,0.00009947188,0.00014610618,0.000086107415,0.00020238748,0.00012708544,0.00013339621,0.0005149755,0.00032718075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022193196,0.00007030382,0.00022872476,0.00004303722,0.00000640108,0.000036663903,0.000009712068,0.000042598906,0.9983541,0.000046182064,0.000089688714,0.0008506739],"study_design_scores_gemma":[0.00014944619,0.0025592465,0.021715788,0.00003310924,0.00007163705,0.00094207836,0.00019028866,0.0018278889,0.96151966,0.00008407181,0.010891476,0.00001530285],"about_ca_topic_score_codex":0.0005445277,"about_ca_topic_score_gemma":0.0005555059,"teacher_disagreement_score":0.002125398,"about_ca_system_score_codex":0.00022593165,"about_ca_system_score_gemma":0.00010772282,"threshold_uncertainty_score":0.007110238},"labels":[],"label_agreement":null},{"id":"W4223475576","doi":"10.1038/s41541-022-00463-3","title":"Elimination of receptor binding by influenza hemagglutinin improves vaccine-induced immunity","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Medicago (Canada); McGill University; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Immunogenicity; Hemagglutinin (influenza); Avidity; Immunology; Virology; Antibody; Vaccination; Humoral immunity; Population; Immunity; Biology; Immune system; Influenza vaccine; Cytokine; Virus; Medicine","score_opus":0.06184681443304069,"score_gpt":0.3663659947037219,"score_spread":0.3045191802706812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223475576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99733585,0.0005904352,0.0011972268,0.000060328024,0.00002779614,0.00002454166,0.00009610053,0.000039778937,0.0006278733],"genre_scores_gemma":[0.9976217,0.00025649852,0.00093854405,0.000039816077,0.000009907924,0.0000129108885,0.00015750418,0.0000078611765,0.00095527613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990726,0.000017136454,0.0000071032105,0.00001559136,0.00002394898,0.000028931654],"domain_scores_gemma":[0.99991953,0.000016340304,0.000023277184,0.0000083152245,0.000009542621,0.000023081484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013431662,0.00027514398,0.00024131539,0.00012554349,0.00007334795,0.0002026412,0.00020793048,0.00029493828,0.0009385084],"category_scores_gemma":[0.00011015278,0.00008512826,0.0001506504,0.00005487143,0.00014603055,0.00016421083,0.000119026656,0.0006388604,0.00020517976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000116182906,0.00010697281,0.00011368262,0.00002147926,0.0000037879138,0.000010194561,0.0000034343389,0.000055396296,0.998302,0.00002441172,0.00002282906,0.0012196557],"study_design_scores_gemma":[0.000041185973,0.004236488,0.0056925495,0.000009110059,0.000018099883,0.00016850341,0.000018422228,0.00078975246,0.98759615,0.000039166578,0.0013876557,0.0000029576624],"about_ca_topic_score_codex":0.00023275185,"about_ca_topic_score_gemma":0.000318349,"teacher_disagreement_score":0.0009385084,"about_ca_system_score_codex":0.00013184696,"about_ca_system_score_gemma":0.000109015986,"threshold_uncertainty_score":0.003139615},"labels":[],"label_agreement":null},{"id":"W4224981192","doi":"10.1038/s41541-022-00461-5","title":"Two DNA vaccines protect against severe disease and pathology due to SARS-CoV-2 in Syrian hamsters","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; McMaster University; University of Toronto; University of Saskatchewan; Université Laval; University of Alberta; University of Guelph; Health Sciences Centre; Sunnybrook Health Science Centre","funders":"University of Toronto; Canadian Institutes of Health Research; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Immunogenicity; DNA vaccination; Virology; Vaccination; Hamster; Pandemic; Immune system; Medicine; Antibody; Immunology; Titer; Infectious disease (medical specialty); Mesocricetus; Biology; Virus; Disease; Antibody titer; Coronavirus disease 2019 (COVID-19); Immunization; Pathology","score_opus":0.030142975583911658,"score_gpt":0.32906832243231277,"score_spread":0.2989253468484011,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224981192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974349,0.0006446869,0.0010553296,0.00006708221,0.000050755727,0.00006599604,0.00016108261,0.000051313873,0.00046879056],"genre_scores_gemma":[0.99402267,0.00061673834,0.0020155685,0.00010269983,0.000029469007,0.00010703879,0.0007788846,0.000015455691,0.0023114006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998487,0.00001873053,0.000016214468,0.0000364402,0.000032848286,0.000046988243],"domain_scores_gemma":[0.9998747,0.000016590046,0.000042488547,0.0000108845325,0.000018819075,0.000036568916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022824822,0.00058516645,0.00061705796,0.0006204386,0.00013573236,0.00030171833,0.00023130963,0.0006268821,0.00088386994],"category_scores_gemma":[0.00022310515,0.0001737723,0.00029710802,0.00016586631,0.00035732254,0.00023178011,0.0002225899,0.00050231226,0.00020074216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004176604,0.00028799268,0.0003783019,0.00006791997,0.000018596447,0.000047482892,0.00002148467,0.00021733147,0.9949792,0.000104268125,0.000042631153,0.0034171431],"study_design_scores_gemma":[0.00058662164,0.018202735,0.009266363,0.00003424605,0.00011346117,0.00029571832,0.000044833843,0.0014091796,0.9666553,0.00016639757,0.0032062824,0.00001877791],"about_ca_topic_score_codex":0.0003325875,"about_ca_topic_score_gemma":0.00046388526,"teacher_disagreement_score":0.00088386994,"about_ca_system_score_codex":0.00042037078,"about_ca_system_score_gemma":0.00035000255,"threshold_uncertainty_score":0.0030500889},"labels":[],"label_agreement":null},{"id":"W4283713536","doi":"10.1038/s41541-022-00498-6","title":"A chimeric thermostable M2e and H3 stalk-based universal influenza A virus vaccine","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Virology; Virus; Influenza A virus; Influenza vaccine; Biology","score_opus":0.046300888017817544,"score_gpt":0.333857234830777,"score_spread":0.28755634681295944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283713536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99245,0.0007146286,0.0059639765,0.000045768185,0.000019302923,0.00003502696,0.00017827471,0.000048803548,0.000544247],"genre_scores_gemma":[0.9925639,0.0002634557,0.005166863,0.000046901398,0.0000046203572,0.000024844117,0.0003721816,0.000008391374,0.0015487961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994254,0.000008009764,0.0000040702103,0.000012927516,0.000014108139,0.000018444332],"domain_scores_gemma":[0.99995923,0.000003731437,0.000011680825,0.00000514709,0.0000075961693,0.000012567194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013228685,0.00023286638,0.00016982107,0.0000945549,0.000091808804,0.00013679925,0.00020074005,0.0002885129,0.0007084304],"category_scores_gemma":[0.00006501106,0.00008626916,0.00021858483,0.00007275811,0.00014723944,0.00015742831,0.00023889265,0.00030714952,0.00022804481],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056247307,0.000019173023,0.00022355685,0.000016995074,0.000004800672,0.000022788623,0.000007135116,0.00012427609,0.9986286,0.000077579025,0.000023753639,0.00079526537],"study_design_scores_gemma":[0.000036609556,0.00094092026,0.004701749,0.0000083673,0.00002571945,0.00046179484,0.000024410581,0.0020022574,0.986808,0.000063022184,0.0049200486,0.000007150553],"about_ca_topic_score_codex":0.000550662,"about_ca_topic_score_gemma":0.00068924756,"teacher_disagreement_score":0.0007084304,"about_ca_system_score_codex":0.0003128818,"about_ca_system_score_gemma":0.00016524718,"threshold_uncertainty_score":0.0023699403},"labels":[],"label_agreement":null},{"id":"W4283715073","doi":"10.1038/s41541-022-00487-9","title":"Immunogenicity and protective efficacy of RSV G central conserved domain vaccine with a prefusion nanoparticle","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Respiratory viral infections research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Immunogenicity; Virology; Antigen; Immune system; Antibody; Bivalent (engine); Biology; Neutralizing antibody; Virus; Immunology; Chemistry","score_opus":0.021372095533543422,"score_gpt":0.2990524299566449,"score_spread":0.27768033442310147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283715073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980586,0.00039745157,0.0010763884,0.000029795767,0.000017012157,0.000016742963,0.000027540973,0.000017411236,0.00035911467],"genre_scores_gemma":[0.99859494,0.00013769126,0.0006874954,0.000022399137,0.0000051256666,0.00001358706,0.000075421245,0.000004368872,0.00045888484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989593,0.000016969549,0.000007635649,0.000022426053,0.000028614535,0.000028426019],"domain_scores_gemma":[0.9999261,0.000017805734,0.000014995806,0.00000835865,0.000016460153,0.000016305074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018432016,0.00030083425,0.00017091694,0.00013012064,0.000087791515,0.00017050805,0.0001506385,0.00038833902,0.0004346674],"category_scores_gemma":[0.0001652278,0.000104270985,0.00017951804,0.00005731387,0.00018663336,0.00020805879,0.00014400053,0.0003998274,0.00008989193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022810491,0.00011420881,0.0001900671,0.000031193336,0.0000059853746,0.000022622502,0.000019487834,0.00019743676,0.99727064,0.00005276539,0.000024035133,0.0018434512],"study_design_scores_gemma":[0.000043414377,0.004198094,0.0022763773,0.0000060283255,0.000036569556,0.00017585825,0.000022473261,0.0021993406,0.9902478,0.00004677893,0.00074232457,0.0000049580276],"about_ca_topic_score_codex":0.00057389034,"about_ca_topic_score_gemma":0.00048760325,"teacher_disagreement_score":0.00057389034,"about_ca_system_score_codex":0.00021800745,"about_ca_system_score_gemma":0.00017637628,"threshold_uncertainty_score":0.0015817285},"labels":[],"label_agreement":null},{"id":"W4292133657","doi":"10.1038/s41541-022-00506-9","title":"Working correlates of protection predict SchuS4-derived-vaccine candidates with improved efficacy against an intracellular bacterium, Francisella tularensis","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Institute of Arthritis and Musculoskeletal and Skin Diseases; U.S. Department of Health and Human Services","keywords":"CLPB; Francisella tularensis; Francisella; Tularemia; Biology; Vaccination; Vaccine efficacy; Virology; Microbiology; Intracellular parasite; Immune system; Immunology; Escherichia coli; Genetics; Virulence; Gene","score_opus":0.009411119477213304,"score_gpt":0.2186689479909978,"score_spread":0.2092578285137845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292133657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947062,0.00030251115,0.0038112185,0.000021269354,0.0000059545514,0.000022065644,0.0005299177,0.00006034342,0.0005406424],"genre_scores_gemma":[0.9964742,0.0000969569,0.0022476844,0.000013457492,0.000005308133,0.000020230664,0.0008602776,0.000011893378,0.0002698551],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971,0.000082375955,0.000024336496,0.000050175357,0.000071898394,0.00006128402],"domain_scores_gemma":[0.9985207,0.0004561267,0.00060999667,0.000071736045,0.00022121625,0.00012023088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007695048,0.00085682963,0.00039934786,0.0010792192,0.00014502353,0.00056960946,0.00017175061,0.0002806936,0.0010001537],"category_scores_gemma":[0.001681345,0.00014771278,0.00030411998,0.0005360451,0.00021736279,0.00032862532,0.0003279674,0.00048421358,0.00044955837],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014688403,0.00031326592,0.5978615,0.00012222664,0.000156736,0.00009075579,0.00008143766,0.012826044,0.35647038,0.00026888464,0.00031808025,0.030021863],"study_design_scores_gemma":[0.000026255493,0.003093394,0.5867074,0.00002962456,0.0002630325,0.0002931045,0.00025286977,0.046955366,0.35985318,0.0004287584,0.002050883,0.00004614799],"about_ca_topic_score_codex":0.0007483438,"about_ca_topic_score_gemma":0.0010138056,"teacher_disagreement_score":0.0010792192,"about_ca_system_score_codex":0.00023933518,"about_ca_system_score_gemma":0.00027125364,"threshold_uncertainty_score":0.0040696263},"labels":[],"label_agreement":null},{"id":"W4294238305","doi":"10.1038/s41541-022-00528-3","title":"SARS-CoV-2 mRNA-vaccine candidate; COReNAPCIN®, induces robust humoral and cellular immunity in mice and non-human primates","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Cancer Society Research Institute; Tehran University of Medical Sciences and Health Services; Iran National Science Foundation","keywords":"Vaccination; Virology; Immunology; Rhesus macaque; Immunity; Immunization; Antibody; Biology; Immune system; Neutralizing antibody; Virus; Macaque; Medicine","score_opus":0.039982108891568474,"score_gpt":0.3333923533000061,"score_spread":0.29341024440843766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294238305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98734015,0.0014425329,0.0062857056,0.0001510429,0.000081283935,0.00024700817,0.0005066218,0.00029042404,0.0036551848],"genre_scores_gemma":[0.98976046,0.0008862695,0.0039397115,0.00013426787,0.000029533638,0.00017347242,0.0009821398,0.00003620895,0.0040578893],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998599,0.00002589856,0.000007447882,0.00003983233,0.000041226085,0.000025705669],"domain_scores_gemma":[0.9999125,0.000019847877,0.000022821208,0.000011385771,0.000015640318,0.000017842058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025928157,0.00048196682,0.000289363,0.00023248789,0.000109468594,0.0002189576,0.0001510827,0.00038269756,0.0012942466],"category_scores_gemma":[0.00017983979,0.00012949975,0.00014959286,0.0000922687,0.0002635168,0.00019993394,0.00010751645,0.00062015007,0.00037306972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015108718,0.00014461606,0.000070705966,0.000047224738,0.000003461003,0.00003268153,0.0000130715825,0.00009887931,0.99759454,0.00005051215,0.00008798149,0.0017052811],"study_design_scores_gemma":[0.000120788405,0.006036829,0.0024697392,0.0000161655,0.000026228816,0.00037945624,0.000023805569,0.001308314,0.98427755,0.00007985819,0.0052550742,0.0000062564804],"about_ca_topic_score_codex":0.00035718782,"about_ca_topic_score_gemma":0.00059041183,"teacher_disagreement_score":0.0012942466,"about_ca_system_score_codex":0.00020507025,"about_ca_system_score_gemma":0.00028331584,"threshold_uncertainty_score":0.004329741},"labels":[],"label_agreement":null},{"id":"W4304808123","doi":"10.1038/s41541-022-00540-7","title":"Immunogenicity of SARS-CoV-2 spike antigens derived from Beta & Delta variants of concern","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Research Council Canada; Government of Canada","keywords":"Immunogenicity; Antigen; Virology; Neutralizing antibody; Immune system; Spike Protein; Antibody; Immunology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Disease; Medicine; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty)","score_opus":0.08750393595213496,"score_gpt":0.36272063183021175,"score_spread":0.2752166958780768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304808123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998789,0.00008327862,0.0007217952,0.000016221646,0.000007211587,0.00001101358,0.00003218822,0.00000664992,0.0003324965],"genre_scores_gemma":[0.99878794,0.00006443697,0.00057839503,0.000029232951,0.000004595207,0.0000068072536,0.00018310279,0.00000408861,0.00034133252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987864,0.000020006039,0.000008858394,0.000021827058,0.000037683967,0.000032969347],"domain_scores_gemma":[0.9999254,0.0000115933135,0.000021932996,0.000008132099,0.000015471533,0.000017448794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017696184,0.00032139363,0.0001248056,0.00012246291,0.000066468165,0.00021484206,0.000112327456,0.00022199623,0.000611289],"category_scores_gemma":[0.00019544012,0.00009053471,0.00012779525,0.000095573545,0.0001401308,0.0001932397,0.00019811562,0.00040845916,0.00013461485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005954928,0.000040784435,0.00028997037,0.000010411903,0.000003124104,0.000024348015,0.000012104483,0.00012142736,0.99853826,0.000036047164,0.000019093779,0.00084490667],"study_design_scores_gemma":[0.000032834458,0.0034936208,0.009211674,0.0000071133945,0.00002219522,0.00042294167,0.000041853575,0.0016581273,0.98336005,0.00006143266,0.0016808839,0.000007232129],"about_ca_topic_score_codex":0.00029346376,"about_ca_topic_score_gemma":0.00033824955,"teacher_disagreement_score":0.000611289,"about_ca_system_score_codex":0.0001709251,"about_ca_system_score_gemma":0.00011737914,"threshold_uncertainty_score":0.0020449162},"labels":[],"label_agreement":null},{"id":"W4307050663","doi":"10.1038/s41541-022-00546-1","title":"Moderate to severe SARS-CoV-2 infection primes vaccine-induced immunity more effectively than asymptomatic or mild infection","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Government of Canada","keywords":"Vaccination; Immunity; Asymptomatic; Immunology; Humoral immunity; Cellular immunity; Immune system; Medicine; ELISPOT; CD8; Internal medicine","score_opus":0.04949366846335632,"score_gpt":0.36255599001676553,"score_spread":0.3130623215534092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307050663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99958545,0.00006501653,0.00009461374,0.000011828505,0.000006331367,0.000014906672,0.000026923699,0.0000056099543,0.00018931567],"genre_scores_gemma":[0.9995097,0.000033461274,0.00009529558,0.000022841577,0.000009583963,0.000011300393,0.000070411385,0.0000013261075,0.00024603703],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998753,0.0000313079,0.000008562092,0.000025044434,0.00001826536,0.000041447838],"domain_scores_gemma":[0.9998443,0.00004035338,0.000029023733,0.000016527954,0.000009643263,0.000059991642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018217647,0.0002612765,0.0002556998,0.00008704245,0.0000753728,0.00018638671,0.00006796901,0.00021388654,0.0014918213],"category_scores_gemma":[0.00020437241,0.00008572236,0.00017727444,0.000034274897,0.00015811868,0.00013549093,0.00017332204,0.0005359573,0.00016566904],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014286867,0.0006637464,0.00812115,0.000061180755,0.000016524104,0.00007715187,0.00006812408,0.00010972919,0.98506886,0.00004589679,0.00009130157,0.00424775],"study_design_scores_gemma":[0.0004461605,0.0561547,0.54131126,0.00005809997,0.00008630516,0.0013431687,0.0005195455,0.002352139,0.3944857,0.0001944212,0.0030205103,0.00002797601],"about_ca_topic_score_codex":0.0001537517,"about_ca_topic_score_gemma":0.0002350484,"teacher_disagreement_score":0.0014918213,"about_ca_system_score_codex":0.00009232811,"about_ca_system_score_gemma":0.00010993222,"threshold_uncertainty_score":0.0049906373},"labels":[],"label_agreement":null},{"id":"W4308679225","doi":"10.1038/s41541-022-00569-8","title":"Understanding thrombosis with thrombocytopenia syndrome after COVID-19 vaccination","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Heparin-Induced Thrombocytopenia and Thrombosis","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Bayer Vital; Astellas Pharma; Mylan; World Health Organization; Amgen; Sanofi; Falk Foundation","keywords":"Coronavirus disease 2019 (COVID-19); Vaccination; Medicine; Thrombosis; 2019-20 coronavirus outbreak; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Internal medicine; Outbreak; Infectious disease (medical specialty)","score_opus":0.1346905873674663,"score_gpt":0.326893851794848,"score_spread":0.19220326442738167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308679225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61690986,0.19126381,0.02669879,0.1109894,0.0022651034,0.00042013338,0.0007607252,0.00039683707,0.050295386],"genre_scores_gemma":[0.8743668,0.098044805,0.004601397,0.013043708,0.0044781067,0.00009521004,0.00042318742,0.000024824994,0.004921954],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99955076,0.00017855794,0.00005877411,0.000059612506,0.00007958137,0.000072649185],"domain_scores_gemma":[0.99941385,0.00026006313,0.00016065693,0.000022231812,0.00009160584,0.00005159812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008210388,0.0002630765,0.00035448026,0.00071801885,0.00024833047,0.00089178834,0.00022745461,0.0010557852,0.001217513],"category_scores_gemma":[0.0020082146,0.00013753222,0.0002747597,0.00028450493,0.00031861223,0.0010633274,0.00041279005,0.0012737578,0.00023749554],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016115778,0.0005550084,0.2726086,0.0027842328,0.00035634456,0.11272088,0.0049757254,0.0014469288,0.034133922,0.021337831,0.051066607,0.4964024],"study_design_scores_gemma":[0.00015120796,0.002892193,0.37917104,0.003992541,0.0005953066,0.32706565,0.0063684615,0.0037861525,0.016642513,0.02313848,0.23606372,0.00013274803],"about_ca_topic_score_codex":0.00085288764,"about_ca_topic_score_gemma":0.0004923994,"teacher_disagreement_score":0.001217513,"about_ca_system_score_codex":0.00043927162,"about_ca_system_score_gemma":0.00045065934,"threshold_uncertainty_score":0.004342139},"labels":[],"label_agreement":null},{"id":"W4308735505","doi":"10.1038/s41541-022-00561-2","title":"Safety and immunogenicity of an AS03-adjuvanted plant-based SARS-CoV-2 vaccine in Adults with and without Comorbidities","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Q & T Research; Manna Research; Université Laval; McGill University Health Centre; Medicago (Canada)","funders":"","keywords":"Medicine; Immunogenicity; Vaccination; Adverse effect; ELISPOT; Placebo; Tolerability; Interim analysis; Randomized controlled trial; Reactogenicity; Immunology; Neutralizing antibody; Internal medicine; Antibody; Immune system; T cell","score_opus":0.024583945761893017,"score_gpt":0.3074810537787257,"score_spread":0.28289710801683265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308735505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989542,0.00031594225,0.000103731036,0.0000405716,0.000016341648,0.00013805364,0.00017587384,0.0000054231523,0.00024983342],"genre_scores_gemma":[0.9981342,0.00029296527,0.00023935176,0.00013583117,0.00003499412,0.00033167316,0.00033498873,0.0000020784576,0.00049394],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99967504,0.00012789597,0.000032017717,0.000052164436,0.000058000267,0.000054838605],"domain_scores_gemma":[0.9996313,0.000066954286,0.00012467417,0.00003284578,0.000050587143,0.0000936506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011750847,0.0003462295,0.0006618359,0.00011959937,0.00022334715,0.00033978265,0.00021226208,0.00067825645,0.0012838544],"category_scores_gemma":[0.0011008825,0.00018553188,0.0006210882,0.00017252122,0.0002953387,0.00039661129,0.00017427011,0.00081669685,0.00027469997],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.7422863,0.026547782,0.04601483,0.0006105609,0.00071985024,0.0003330651,0.0006349849,0.0011494736,0.0776824,0.0001843241,0.0012060202,0.10263041],"study_design_scores_gemma":[0.040484365,0.8668817,0.08233234,0.000044892062,0.0004436891,0.0002842352,0.00016870887,0.00063220266,0.0066847946,0.00013875971,0.0018824865,0.000021940199],"about_ca_topic_score_codex":0.0004434936,"about_ca_topic_score_gemma":0.0005013461,"teacher_disagreement_score":0.0012838544,"about_ca_system_score_codex":0.0002477546,"about_ca_system_score_gemma":0.0004935652,"threshold_uncertainty_score":0.006214559},"labels":[],"label_agreement":null},{"id":"W4310275049","doi":"10.1038/s41541-022-00572-z","title":"A highly immunogenic vaccine platform against encapsulated pathogens using chimeric probiotic Escherichia coli membrane vesicles","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Umeå Universitet; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Japan Agency for Medical Research and Development; Karolinska Institutet; Nihon University","keywords":"Immunogenicity; Immune system; Adjuvant; Biology; Microbiology; Escherichia coli; Antigen; ELISPOT; Vaccination; Virology; Immunology; T cell; Biochemistry; Gene","score_opus":0.020061104714728654,"score_gpt":0.2526604921828822,"score_spread":0.23259938746815356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310275049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844668,0.0007714778,0.013880014,0.00007491098,0.000037901576,0.000046600577,0.00013546864,0.00007306347,0.00051379396],"genre_scores_gemma":[0.9890737,0.00049963663,0.009030652,0.000033150038,0.0000066881657,0.000032792337,0.00026644592,0.0000114359445,0.0010454856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999429,0.000011643244,0.000004834528,0.000010983662,0.000013432999,0.00001614754],"domain_scores_gemma":[0.9999696,0.0000022325007,0.00001175941,0.0000030676372,0.000005759911,0.0000075199955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011462746,0.00032510588,0.00017889912,0.000117208685,0.000086146916,0.00022808246,0.0001851394,0.00033229968,0.00031816514],"category_scores_gemma":[0.00006648623,0.00011706191,0.0002516943,0.00008155711,0.00010974358,0.00019700479,0.000279606,0.00028696074,0.00019602595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023263337,0.000011621939,0.000069880225,0.000017739552,0.0000031184413,0.000016404856,0.0000023711004,0.00014884837,0.9989341,0.000092602655,0.000011841965,0.00066833576],"study_design_scores_gemma":[0.000008976977,0.0002498639,0.00052763853,0.0000044438543,0.000012907816,0.0000962905,0.00000876066,0.0013709761,0.99605346,0.000037451086,0.0016258612,0.0000033094798],"about_ca_topic_score_codex":0.00019186201,"about_ca_topic_score_gemma":0.00017286718,"teacher_disagreement_score":0.00033229968,"about_ca_system_score_codex":0.00019038265,"about_ca_system_score_gemma":0.0001378706,"threshold_uncertainty_score":0.001381278},"labels":[],"label_agreement":null},{"id":"W4310710432","doi":"10.1038/s41541-022-00577-8","title":"mRNA-LNP expressing PfCSP and Pfs25 vaccine candidates targeting infection and transmission of Plasmodium falciparum","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Malaria Research and Control","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"U.S. Department of Health and Human Services; National Institutes of Health; Bloomberg Philanthropies; National Institute of Allergy and Infectious Diseases; Johns Hopkins University; George Washington University","keywords":"Malaria; Plasmodium falciparum; Virology; Immunogenicity; Vaccination; Malaria vaccine; Immunity; Immune system; Transmission (telecommunications); Immunology; Medicine; Biology","score_opus":0.010724988546791523,"score_gpt":0.26687218283371433,"score_spread":0.2561471942869228,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310710432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883066,0.0022138152,0.0072770296,0.00014344873,0.00008770526,0.00013188123,0.0002856657,0.000090802954,0.0014632022],"genre_scores_gemma":[0.98811215,0.0018485739,0.006841763,0.00008416587,0.000036006448,0.00012743754,0.00078154646,0.0000128891725,0.002155452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987555,0.00001606146,0.000007909563,0.000023338998,0.000041393574,0.000035867215],"domain_scores_gemma":[0.9999567,0.0000065870177,0.000012584144,0.0000031121338,0.000008715443,0.000012177933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014286916,0.0004175428,0.0002452537,0.00016638063,0.00008446584,0.00015087194,0.00019624962,0.0002987441,0.0007284314],"category_scores_gemma":[0.0001532609,0.00010520601,0.00020287918,0.00012021577,0.00017190215,0.0001695499,0.00012240816,0.00048686526,0.00018970565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001258665,0.00006695815,0.00008999151,0.00006262201,0.00000479129,0.000043580178,0.00000899846,0.00039975063,0.9960318,0.00008604002,0.00009943802,0.002980192],"study_design_scores_gemma":[0.000064461696,0.004991495,0.0020583184,0.00001590988,0.000054548513,0.0003865274,0.000026972173,0.003276262,0.983536,0.00007468465,0.0055047246,0.000010113871],"about_ca_topic_score_codex":0.0006884555,"about_ca_topic_score_gemma":0.0008022441,"teacher_disagreement_score":0.0007284314,"about_ca_system_score_codex":0.000320334,"about_ca_system_score_gemma":0.0002504617,"threshold_uncertainty_score":0.0024368167},"labels":[],"label_agreement":null},{"id":"W4310785106","doi":"10.1038/s41541-022-00574-x","title":"Centrin-deficient Leishmania mexicana confers protection against Old World visceral leishmaniasis","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Global Health Innovative Technology Fund","keywords":"Leishmania donovani; Visceral leishmaniasis; Leishmaniasis; Immunology; Leishmania mexicana; Immunization; Disease; Biology; Medicine; Leishmania; Virology; Immune system; Parasite hosting; Pathology","score_opus":0.033859373875548694,"score_gpt":0.28243350310939086,"score_spread":0.24857412923384217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310785106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996338,0.00063027325,0.0009892061,0.00016687205,0.000041209143,0.000026099768,0.00052712497,0.00007492882,0.0012062911],"genre_scores_gemma":[0.99500704,0.00032987248,0.00060058373,0.00007084594,0.000006322245,0.000025817952,0.0006203697,0.000015593467,0.0033236889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999269,0.000011780235,0.0000063245966,0.000018562698,0.000016728756,0.000019705465],"domain_scores_gemma":[0.9999168,0.000009063943,0.000027821123,0.0000091187985,0.000010286742,0.000027020995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009556689,0.00026007707,0.00017820961,0.00018944427,0.00012627467,0.00029098862,0.00019421037,0.000313005,0.0017536224],"category_scores_gemma":[0.00007876124,0.000104678154,0.000141973,0.000078428915,0.00021151193,0.00013411939,0.00014586898,0.0005315905,0.000275615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002029474,0.00005182505,0.00022027399,0.00005040302,0.0000072928756,0.00003935234,0.000011802775,0.00005230275,0.9983694,0.00007131479,0.00009744137,0.00082574715],"study_design_scores_gemma":[0.00011253643,0.0016182258,0.016554356,0.000031394993,0.000070478454,0.0005980821,0.00015644712,0.0017488218,0.9657291,0.00009956227,0.013264807,0.000016137132],"about_ca_topic_score_codex":0.00064884924,"about_ca_topic_score_gemma":0.00074992614,"teacher_disagreement_score":0.0017536224,"about_ca_system_score_codex":0.00024699327,"about_ca_system_score_gemma":0.00010996587,"threshold_uncertainty_score":0.005866468},"labels":[],"label_agreement":null},{"id":"W4312112870","doi":"10.1038/s41541-022-00581-y","title":"A novel intradermal tattoo-based injection device enhances the immunogenicity of plasmid DNA vaccines","year":2022,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; Université Laval","funders":"Government of Canada; Canadian Institutes of Health Research; Université Laval","keywords":"DNA vaccination; Immunogenicity; Medicine; Immune system; Intradermal injection; Immunology; Virology; Vaccination; Monkeypox; Vaccinia; Biology; Recombinant DNA; Immunization","score_opus":0.020679576345980014,"score_gpt":0.2773139550290875,"score_spread":0.2566343786831075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312112870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92508733,0.0049305223,0.06663102,0.00021220131,0.00018965632,0.00026069963,0.00018018913,0.00045858047,0.0020497264],"genre_scores_gemma":[0.9577132,0.0018045317,0.03741644,0.000100098274,0.00005266113,0.00011287297,0.00015011577,0.000025564292,0.0026246693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982446,0.000024841638,0.000015495234,0.00005086097,0.00005720809,0.000027210419],"domain_scores_gemma":[0.99987996,0.000028464357,0.000047296602,0.000009306346,0.000019264338,0.000015661572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018866843,0.00037024767,0.000224207,0.0003854592,0.00011119993,0.0003156821,0.00021343997,0.0003254467,0.0005732455],"category_scores_gemma":[0.00023417156,0.000106090134,0.00021965074,0.00015766971,0.00023910208,0.0003924198,0.0002035226,0.0003342569,0.0001975017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007563041,0.000050052142,0.00015747435,0.00005767051,0.0000035046164,0.00004075735,0.000020947557,0.000082890925,0.993764,0.00011123875,0.000049935472,0.0055858986],"study_design_scores_gemma":[0.000020523468,0.0015111973,0.0019419808,0.000008513131,0.000031678363,0.00028759002,0.000017097835,0.0017714851,0.9898948,0.000033469423,0.004468974,0.000012721587],"about_ca_topic_score_codex":0.00016467337,"about_ca_topic_score_gemma":0.00021020552,"teacher_disagreement_score":0.0005732455,"about_ca_system_score_codex":0.00014186067,"about_ca_system_score_gemma":0.00015174814,"threshold_uncertainty_score":0.0019177198},"labels":[],"label_agreement":null},{"id":"W4317904869","doi":"10.1038/s41541-022-00598-3","title":"Toxin expression during Staphylococcus aureus infection imprints host immunity to inhibit vaccine efficacy","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"National Institute of Allergy and Infectious Diseases; Research Institute, Nationwide Children's Hospital; Nationwide Children's Hospital; U.S. Department of Health and Human Services","keywords":"Staphylococcus aureus; Microbiology; Immunity; Toxin; Biology; Host (biology); Virology; Immunology; Immune system; Bacteria; Genetics","score_opus":0.016962844077610714,"score_gpt":0.2945455988870842,"score_spread":0.2775827548094735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317904869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956204,0.0006332064,0.0025871324,0.00009077657,0.000023690174,0.00001955835,0.00008542411,0.000054802033,0.00088489114],"genre_scores_gemma":[0.99846774,0.00018068087,0.00070858054,0.000031255393,0.0000067257256,0.0000089527875,0.0000495442,0.000006840598,0.000539636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999864,0.000028834987,0.000010160689,0.000019804753,0.000029666558,0.0000475702],"domain_scores_gemma":[0.99984884,0.000042265096,0.000048707265,0.000020992471,0.00001088911,0.00002832618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016826132,0.00022891795,0.00019740907,0.00010906465,0.00004922805,0.00026978945,0.00009936475,0.00025300484,0.0009102361],"category_scores_gemma":[0.0001321013,0.00008830722,0.00015723778,0.00005609449,0.00019798249,0.00014888092,0.00015731246,0.00068083947,0.0002438203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049014358,0.000031185387,0.00030761177,0.000008292491,0.000001351381,0.000015671487,0.000004958865,0.000055947068,0.99883896,0.00008010891,0.000014824524,0.00059205206],"study_design_scores_gemma":[0.000011419814,0.0010504215,0.005032346,0.000008667651,0.000007233321,0.00012226701,0.000018846396,0.0014431477,0.9912209,0.00008074869,0.001001681,0.0000023133969],"about_ca_topic_score_codex":0.0001588613,"about_ca_topic_score_gemma":0.00021415262,"teacher_disagreement_score":0.0009102361,"about_ca_system_score_codex":0.00020529659,"about_ca_system_score_gemma":0.00015479776,"threshold_uncertainty_score":0.0030450225},"labels":[],"label_agreement":null},{"id":"W4320482409","doi":"10.1038/s41541-023-00612-2","title":"Robust induction of functional humoral response by a plant-derived Coronavirus-like particle vaccine candidate for COVID-19","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Medicago (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; Massachusetts Consortium on Pathogen Readiness; Ragon Institute of MGH, MIT and Harvard","keywords":"Immunogenicity; Virology; Vaccination; Immunity; Humoral immunity; Immunology; Antibody; Biology; Coronavirus disease 2019 (COVID-19); Neutralizing antibody; Immune system; Outbreak; Effector; Medicine; Disease; Infectious disease (medical specialty)","score_opus":0.1389889966896661,"score_gpt":0.372899909750102,"score_spread":0.2339109130604359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320482409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997324,0.0005245025,0.0012773484,0.00006686437,0.00003974078,0.000059113885,0.0001638342,0.000028337574,0.0005162049],"genre_scores_gemma":[0.9972523,0.00025114033,0.00096821715,0.000117380354,0.000014094248,0.000036893507,0.0005135169,0.0000072207913,0.0008392269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987483,0.000026829899,0.000008725682,0.000021633336,0.000031434945,0.000036536225],"domain_scores_gemma":[0.99991703,0.000015763992,0.000020569829,0.000008504068,0.000019666786,0.000018438763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026905094,0.0002745282,0.00021090599,0.000112178896,0.00009338891,0.00020731262,0.00011567554,0.0003188362,0.0008613236],"category_scores_gemma":[0.00019126855,0.00006748559,0.00016696515,0.00005698905,0.00012998434,0.00016986836,0.00011110431,0.00074346765,0.0001947823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028204336,0.0001794768,0.0003845756,0.000042885677,0.0000056782683,0.000026052365,0.00001560554,0.00012941993,0.996258,0.000022032473,0.00006350205,0.002590661],"study_design_scores_gemma":[0.00016252864,0.020525659,0.01722849,0.000022360427,0.000052837182,0.0006108304,0.00007810624,0.0015255193,0.9551352,0.00008721154,0.0045605553,0.000010714499],"about_ca_topic_score_codex":0.0001906086,"about_ca_topic_score_gemma":0.00029349257,"teacher_disagreement_score":0.0008613236,"about_ca_system_score_codex":0.0001467732,"about_ca_system_score_gemma":0.0001559425,"threshold_uncertainty_score":0.0028814077},"labels":[],"label_agreement":null},{"id":"W4321614596","doi":"10.1038/s41541-023-00623-z","title":"Intranasal multivalent adenoviral-vectored vaccine protects against replicating and dormant M.tb in conventional and humanized mice","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McMaster University","funders":"Canadian Institutes of Health Research; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; Government of Canada","keywords":"Tuberculosis vaccines; Medicine; Immunology; Mycobacterium tuberculosis; Virology; Antigen; Tuberculosis; Immunity; Vaccine efficacy; Vaccination; Immune system; Pathology","score_opus":0.031440473423281046,"score_gpt":0.33408668721806783,"score_spread":0.3026462137947868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321614596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928854,0.0021956037,0.0029022763,0.00015365588,0.00011796607,0.00010838377,0.00032465725,0.00027648246,0.0010355869],"genre_scores_gemma":[0.99340856,0.00077972515,0.002042127,0.000117528616,0.000037370737,0.00008061917,0.00043243726,0.000029624862,0.0030718716],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999736,0.000042713807,0.000022241948,0.00009032618,0.000048202037,0.000060481627],"domain_scores_gemma":[0.99986744,0.000019043386,0.000035877703,0.00003058157,0.000011144101,0.000035981113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046095022,0.00066852424,0.0003731629,0.0003703365,0.0001439161,0.0004249,0.00028152711,0.0005707581,0.0012743088],"category_scores_gemma":[0.0002022131,0.00020643468,0.00024716335,0.0001149097,0.00044022108,0.00035013538,0.00015096532,0.0011127447,0.00037106252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079752953,0.00046550352,0.00022671884,0.000055455137,0.000016130025,0.000067188244,0.000039539656,0.000118015916,0.9948901,0.00015325166,0.0001478502,0.003022549],"study_design_scores_gemma":[0.00051453494,0.016681409,0.005427987,0.00004788281,0.00009144039,0.0012683388,0.00008065123,0.002910596,0.96571666,0.00019557224,0.0070454194,0.00001957412],"about_ca_topic_score_codex":0.00068391126,"about_ca_topic_score_gemma":0.0004895787,"teacher_disagreement_score":0.0012743088,"about_ca_system_score_codex":0.0002487468,"about_ca_system_score_gemma":0.00031613657,"threshold_uncertainty_score":0.0042630434},"labels":[],"label_agreement":null},{"id":"W4322009593","doi":"10.1038/s41541-023-00614-0","title":"Incidence determinants and serological correlates of reactive symptoms following SARS-CoV-2 vaccination","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Asthma and Lung UK; British Heart Foundation; National Institute for Health and Care Research; Cancer Research UK; DSM Nutritional Products; British Lung Foundation; Barts Charity; Diabetes UK; UK Research and Innovation; Rosetrees Trust; Arthritis Society; Vasculitis UK","keywords":"Vaccination; Medicine; Serology; Incidence (geometry); Population; Immunology; Internal medicine; Antibody; Environmental health","score_opus":0.045446907391518285,"score_gpt":0.3710850917201945,"score_spread":0.3256381843286762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322009593","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995447,0.00011767599,0.00002960825,0.000010961116,0.000002159749,0.0000028750621,0.000122709,0.0000021869714,0.00016716727],"genre_scores_gemma":[0.99974555,0.000032946886,0.000018427058,0.000005711279,0.0000034151642,0.000002193475,0.0001427433,5.9050654e-7,0.000048388163],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99952567,0.00016150941,0.000055942673,0.00011690474,0.000063180116,0.00007680295],"domain_scores_gemma":[0.99791855,0.00038645422,0.0010528335,0.00014603448,0.00020002811,0.0002962309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070257473,0.0002053669,0.000265694,0.0004438685,0.00013993759,0.000411789,0.0002475768,0.00048153588,0.0012107516],"category_scores_gemma":[0.0030036587,0.0002661605,0.00032774924,0.0005099762,0.00023872418,0.00032154933,0.000376255,0.0005469264,0.00020691096],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007789854,0.000012938395,0.9992581,0.0000040213217,0.000017328848,0.000027204915,0.000032606225,0.000022679651,0.00013985066,0.0000050739677,0.000024196783,0.0003781052],"study_design_scores_gemma":[0.0000013217464,0.00006640432,0.99974793,0.0000010474398,0.0000035648648,0.000073594834,0.000029914701,0.000045022643,0.0000108423255,0.000004051443,0.00001532644,9.168322e-7],"about_ca_topic_score_codex":0.0034310191,"about_ca_topic_score_gemma":0.0023740602,"teacher_disagreement_score":0.0034310191,"about_ca_system_score_codex":0.0001407648,"about_ca_system_score_gemma":0.0001347578,"threshold_uncertainty_score":0.006822109},"labels":[],"label_agreement":null},{"id":"W4322496366","doi":"10.1038/s41541-023-00599-w","title":"Salmonella Typhimurium expressing chromosomally integrated Schistosoma mansoni Cathepsin B protects against schistosomiasis in mice","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; McGill University; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; McGill University Health Centre; Public Health Agency; Public Health Agency of Canada; Government of Canada; McGill University","keywords":"Biology; Schistosoma mansoni; Immunology; Vaccination; Immune system; Microbiology; Schistosomiasis; CD8; Immunogenicity","score_opus":0.016250124006060424,"score_gpt":0.26629684499030515,"score_spread":0.25004672098424474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322496366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953591,0.00057399034,0.0013651472,0.00021636103,0.00008701319,0.00007732636,0.00078082486,0.00027599253,0.0012641446],"genre_scores_gemma":[0.99183756,0.00056364667,0.0016562245,0.00011298182,0.000028075297,0.000094304465,0.00085548096,0.00004323028,0.004808601],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996977,0.000045777608,0.00003228902,0.00006209015,0.000055300963,0.00010685056],"domain_scores_gemma":[0.9995733,0.00003893728,0.00013015226,0.00004660449,0.00003567243,0.00017543705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029643803,0.0008848141,0.0005337012,0.0007299108,0.00018643329,0.00037433198,0.0003260442,0.00077119767,0.0024959869],"category_scores_gemma":[0.00013925512,0.00036919522,0.00046265914,0.0002391404,0.00046837158,0.00036373638,0.00022273979,0.0018037879,0.00066341594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009439154,0.0005332837,0.0001730123,0.00005247121,0.000009347409,0.00003017723,0.000018011144,0.00009736583,0.99697256,0.00007142844,0.00009251879,0.0010058569],"study_design_scores_gemma":[0.00024789124,0.015232208,0.0060049207,0.000036203237,0.000052656513,0.00019072536,0.00008110273,0.0016602293,0.9748233,0.00006791708,0.0015890582,0.000013787957],"about_ca_topic_score_codex":0.0008917047,"about_ca_topic_score_gemma":0.0010180227,"teacher_disagreement_score":0.0024959869,"about_ca_system_score_codex":0.0003053859,"about_ca_system_score_gemma":0.00030614238,"threshold_uncertainty_score":0.0083498955},"labels":[],"label_agreement":null},{"id":"W4327857423","doi":"10.1038/s41541-023-00635-9","title":"Hepatitis C virus E1 and modified E2 delivered from an mRNA vaccine induces protective immunity","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Hepatitis C virus research","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; University of Alberta; Burnet Institute; Saint Louis University; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Johns Hopkins University; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Virology; Immunogenicity; Vaccination; Hepatitis C virus; Immune system; Vaccinia; Epitope; Virus; Immunology; Antibody; Biology; Recombinant DNA","score_opus":0.049371625814115076,"score_gpt":0.3390841122591961,"score_spread":0.289712486445081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327857423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99748164,0.00044489533,0.0012151302,0.000029418168,0.000027118505,0.000023858507,0.000060596103,0.000030535728,0.0006868164],"genre_scores_gemma":[0.99678755,0.00029576,0.00097227475,0.000039804872,0.000011806178,0.000020571635,0.00018053773,0.000008551262,0.0016831218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999088,0.000017217699,0.0000070596425,0.000019338726,0.000022014588,0.00002549914],"domain_scores_gemma":[0.9999435,0.000012282837,0.000014858125,0.000007214334,0.000010378768,0.000011746819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000109450964,0.00038304247,0.00019348972,0.00011171134,0.00006226216,0.00017958773,0.00008011352,0.00025854423,0.0010748616],"category_scores_gemma":[0.00010136349,0.00008492831,0.00016124017,0.000058852267,0.00013509527,0.00012553751,0.00014245264,0.00034263643,0.00022941481],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010740089,0.00004432662,0.00008395085,0.000026573649,0.0000028705208,0.000016644677,0.0000044135854,0.000050629256,0.99887985,0.000020950858,0.0000120921095,0.0007502279],"study_design_scores_gemma":[0.000025715879,0.0019386065,0.0022226474,0.0000072325865,0.00001592307,0.0001732287,0.000013289487,0.0007188098,0.9934881,0.00002335801,0.001370455,0.0000026975604],"about_ca_topic_score_codex":0.000129246,"about_ca_topic_score_gemma":0.00016285469,"teacher_disagreement_score":0.0010748616,"about_ca_system_score_codex":0.000116248986,"about_ca_system_score_gemma":0.00009014611,"threshold_uncertainty_score":0.0035957098},"labels":[],"label_agreement":null},{"id":"W4362700010","doi":"10.1038/s41541-023-00653-7","title":"Glycosylated nanoparticle-based PfCSP vaccine confers long-lasting antibody responses and sterile protection in mouse malaria model","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Malaria Research and Control","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health; Hospital for Sick Children; Deutsches Krebsforschungszentrum; Canadian Institute for Advanced Research; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation","keywords":"Circumsporozoite protein; Immunogen; Malaria vaccine; Plasmodium falciparum; Virology; Epitope; Malaria; Vaccination; Monoclonal antibody; Antibody; Immunity; Biology; Immunology; Immune system","score_opus":0.0358068907599374,"score_gpt":0.3153135242486083,"score_spread":0.2795066334886709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362700010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99071795,0.00086050434,0.0058583943,0.00016620824,0.0000667191,0.00004358312,0.00025356494,0.00016951826,0.0018636014],"genre_scores_gemma":[0.99221474,0.00064696936,0.0036012032,0.00008470842,0.000016017973,0.00004955235,0.00038173396,0.000026242222,0.0029788902],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999002,0.000011723146,0.000006935692,0.000025480615,0.000025775098,0.00002990266],"domain_scores_gemma":[0.99994683,0.00000612881,0.0000151870445,0.0000061283013,0.000011189108,0.000014504714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013453748,0.00033257576,0.00020558554,0.00018822856,0.000081375096,0.0001120461,0.0001448545,0.00038765126,0.0006812071],"category_scores_gemma":[0.00007820248,0.00012364192,0.00017823138,0.000074471034,0.00016038945,0.00020126154,0.000105206724,0.000657543,0.00017564054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009264986,0.000051602932,0.000038750342,0.000030509793,0.0000029915927,0.000021894402,0.000009822759,0.00007351672,0.9985525,0.000054003496,0.000060152994,0.0010116829],"study_design_scores_gemma":[0.000020959149,0.0010732707,0.0009664369,0.0000064366636,0.00001400696,0.0001420848,0.000011832041,0.001209602,0.99508226,0.000052915737,0.0014161126,0.0000040509667],"about_ca_topic_score_codex":0.00039757506,"about_ca_topic_score_gemma":0.00051784643,"teacher_disagreement_score":0.0006812071,"about_ca_system_score_codex":0.00014275342,"about_ca_system_score_gemma":0.00013054318,"threshold_uncertainty_score":0.002278924},"labels":[],"label_agreement":null},{"id":"W4379468626","doi":"10.1038/s41541-023-00687-x","title":"Author Correction: Glycosylated nanoparticle-based PfCSP vaccine confers long-lasting antibody responses and sterile protection in mouse malaria model","year":2023,"lang":"en","type":"erratum","venue":"npj Vaccines","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Virology; Malaria; Malaria vaccine; Antibody; Medicine; Immunology; Biology; Plasmodium falciparum","score_opus":0.027744292965572875,"score_gpt":0.28420071623558046,"score_spread":0.2564564232700076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379468626","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001114311,0.0021605876,0.0033113908,0.033323303,0.953738,0.000023954986,0.0011531059,0.0006598286,0.0045154747],"genre_scores_gemma":[0.06681908,0.026197445,0.020419065,0.0651505,0.18695576,0.00023123843,0.006599267,0.004580993,0.62304664],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977295,0.0002734288,0.00035825733,0.00036883753,0.0010926644,0.00017729748],"domain_scores_gemma":[0.9915685,0.0022189182,0.0005957529,0.00047939326,0.0047253203,0.0004121185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020461513,0.0014323109,0.0011141452,0.0016605646,0.0020945778,0.0021038824,0.0017416908,0.0037196707,0.029853752],"category_scores_gemma":[0.017393894,0.000702479,0.00086509896,0.0012152779,0.0015293485,0.0015571705,0.0012667708,0.0066235387,0.019451354],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012985757,0.000018083,0.00021532651,0.00036183905,0.000024057597,0.0016336965,0.00011316251,0.00014932382,0.0017894839,0.002503475,0.96904624,0.02401546],"study_design_scores_gemma":[0.00002366806,0.00003678658,0.0005658999,0.00019427057,0.000051563497,0.0030848049,0.000106714346,0.00034536826,0.0053479085,0.0012646137,0.9889365,0.00004194638],"about_ca_topic_score_codex":0.0055374987,"about_ca_topic_score_gemma":0.0067120856,"teacher_disagreement_score":0.029853752,"about_ca_system_score_codex":0.0020028614,"about_ca_system_score_gemma":0.002539423,"threshold_uncertainty_score":0.0998708},"labels":[],"label_agreement":null},{"id":"W4380152715","doi":"10.1038/s41541-023-00685-z","title":"The rVSV-EBOV vaccine provides limited cross-protection against Sudan virus in guinea pigs","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Ebola vaccine; Virology; Ebola virus; Biology; Outbreak","score_opus":0.04457040140884193,"score_gpt":0.35145412412845395,"score_spread":0.306883722719612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380152715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966851,0.0012823765,0.0007016902,0.000090063244,0.000027976652,0.000030055184,0.00008157428,0.000023328024,0.0010779832],"genre_scores_gemma":[0.9968592,0.0008958919,0.0008754082,0.0001476027,0.000012337507,0.000031823234,0.00016404843,0.000004302832,0.0010094342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978584,0.000057566478,0.00002211161,0.000049693605,0.00002937327,0.000055451605],"domain_scores_gemma":[0.99983704,0.00004258503,0.000050328825,0.000023196046,0.000017884013,0.000028982035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040251418,0.00044948657,0.00039236614,0.00028633437,0.00011740947,0.00024154971,0.00020737134,0.0005545674,0.00087393005],"category_scores_gemma":[0.00026174998,0.0001862215,0.00024217305,0.00010173426,0.00023753653,0.00031265605,0.00029631736,0.0007716461,0.00022862828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059165165,0.00032975472,0.0013187446,0.00017133084,0.00003019385,0.00013542557,0.00005530983,0.00018479278,0.99110293,0.00016394655,0.00007254085,0.0058432254],"study_design_scores_gemma":[0.00024846246,0.016645217,0.030253725,0.000084628904,0.00012883192,0.0014095142,0.00015064706,0.0017990564,0.9434108,0.0003038422,0.0055493633,0.000015863887],"about_ca_topic_score_codex":0.00032357496,"about_ca_topic_score_gemma":0.0005569886,"teacher_disagreement_score":0.00087393005,"about_ca_system_score_codex":0.0001631987,"about_ca_system_score_gemma":0.00017137207,"threshold_uncertainty_score":0.0029235482},"labels":[],"label_agreement":null},{"id":"W4385663652","doi":"10.1038/s41541-023-00707-w","title":"Self-assembling SARS-CoV-2 spike-HBsAg nanoparticles elicit potent and durable neutralizing antibody responses via genetic delivery","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; National Institute of Allergy and Infectious Diseases; Frederick National Laboratory for Cancer Research; Amsterdam University Medical Centers; National Cancer Institute; National Institutes of Health; Vaccine Research Center; University of South Florida","keywords":"HBsAg; Virology; Antibody; Monoclonal antibody; Neutralizing antibody; Coronavirus disease 2019 (COVID-19); Spike Protein; Vaccination; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Biology; Immunology; Virus; Infectious disease (medical specialty); Hepatitis B virus; Disease","score_opus":0.04895894937930907,"score_gpt":0.35842630172190365,"score_spread":0.3094673523425946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385663652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932899,0.0005256906,0.005049034,0.00005595749,0.000022047403,0.000023998695,0.000046415083,0.00004865479,0.00093833683],"genre_scores_gemma":[0.99476975,0.00031999362,0.0032148603,0.00003827936,0.000007685711,0.000013800967,0.00009413009,0.000009523344,0.0015318652],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999541,0.0000072266957,0.000003175078,0.00000930047,0.000016729371,0.000009443778],"domain_scores_gemma":[0.99996376,0.0000056417634,0.000012863532,0.000003242166,0.00000765814,0.00000689233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007566461,0.00019176562,0.0001079962,0.0000763331,0.000054584645,0.00010661455,0.0000654247,0.0001801537,0.00046267346],"category_scores_gemma":[0.000064516054,0.00006253642,0.00012757402,0.000039007256,0.000107441025,0.00011450739,0.000109173794,0.00019056443,0.00015977521],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019876214,0.000012690519,0.00006259749,0.000015053588,0.0000018936726,0.000016536775,0.0000064447745,0.00006372707,0.9987306,0.000034668665,0.000017638744,0.0010182902],"study_design_scores_gemma":[0.0000071479244,0.00039673026,0.0008659376,0.0000024727312,0.000006519528,0.00010523631,0.000010294189,0.0006928842,0.9967529,0.000023039722,0.0011348642,0.0000019690208],"about_ca_topic_score_codex":0.00016367776,"about_ca_topic_score_gemma":0.0003757779,"teacher_disagreement_score":0.00046267346,"about_ca_system_score_codex":0.0000874758,"about_ca_system_score_gemma":0.000076204946,"threshold_uncertainty_score":0.0015478134},"labels":[],"label_agreement":null},{"id":"W4385762493","doi":"10.1038/s41541-023-00723-w","title":"Author Correction: mRNA-LNP expressing PfCSP and Pfs25 vaccine candidates targeting infection and transmission of Plasmodium falciparum","year":2023,"lang":"en","type":"erratum","venue":"npj Vaccines","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"","keywords":"Virology; Plasmodium falciparum; Transmission (telecommunications); Biology; Medicine; Malaria; Immunology; Computer science; Telecommunications","score_opus":0.012667516780043001,"score_gpt":0.26639030868000696,"score_spread":0.25372279189996394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385762493","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004059162,0.0008916613,0.0023869239,0.031900585,0.95926833,0.000018846607,0.00079469825,0.00043463413,0.0038983359],"genre_scores_gemma":[0.037104346,0.013010535,0.018760188,0.073261105,0.23917253,0.00018952409,0.0044509675,0.0036887925,0.6103621],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977915,0.00026033126,0.00032710575,0.00035656028,0.0011045138,0.00015995438],"domain_scores_gemma":[0.9894533,0.002781886,0.0005746906,0.00048756957,0.0061590862,0.000543427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002116387,0.0017008999,0.0011566916,0.0017331195,0.002557981,0.002330722,0.0021560572,0.0040295967,0.03541184],"category_scores_gemma":[0.020989604,0.0008544693,0.0009773294,0.001237104,0.0015841622,0.0014323306,0.0010671187,0.007418226,0.020768365],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054978555,0.000008486607,0.00007817658,0.00013786787,0.00001154643,0.000698987,0.00004332983,0.0001053725,0.0004441832,0.0017466552,0.9856931,0.010977319],"study_design_scores_gemma":[0.000024466244,0.00002046814,0.00036404416,0.00014374964,0.00003607789,0.0017262322,0.00005855729,0.00036624234,0.0019456715,0.0015566063,0.993725,0.000032855216],"about_ca_topic_score_codex":0.00996978,"about_ca_topic_score_gemma":0.015451797,"teacher_disagreement_score":0.03541184,"about_ca_system_score_codex":0.002698992,"about_ca_system_score_gemma":0.0030778693,"threshold_uncertainty_score":0.11846441},"labels":[],"label_agreement":null},{"id":"W4387100862","doi":"10.1038/s41541-023-00741-8","title":"Vaccination of cattle with the Babesia bovis sexual-stage protein HAP2 abrogates parasite transmission by Rhipicephalus microplus ticks","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agricultural Research Service; National Research Centre; National Institute of Food and Agriculture; International Development Research Centre; Bill and Melinda Gates Foundation; U.S. Department of Agriculture","keywords":"Biology; Babesiosis; Vaccination; Babesia bovis; Virology; Tick; Rhipicephalus; Rhipicephalus microplus; Parasite hosting; Tick infestation; Transmission (telecommunications); Babesia; Veterinary medicine; Microbiology; Medicine","score_opus":0.00768056337794268,"score_gpt":0.24045151958683464,"score_spread":0.23277095620889196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387100862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993069,0.00017320518,0.00018447144,0.0000204793,0.000013341062,0.000010570128,0.000046018966,0.000011234794,0.00023367729],"genre_scores_gemma":[0.9985422,0.00019878936,0.00022093554,0.000035654877,0.0000146140155,0.000016694059,0.00020440214,0.000005975451,0.00076076284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972874,0.000057225257,0.000015947357,0.000042372852,0.000046772355,0.00010897302],"domain_scores_gemma":[0.99983335,0.00003789774,0.000038503058,0.000014960933,0.000014954001,0.000060333634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023724927,0.00047856063,0.00029585892,0.00018849364,0.00014628097,0.00024495972,0.00023202178,0.000268228,0.0011125263],"category_scores_gemma":[0.00021596528,0.00014359425,0.00018663089,0.00006503369,0.00023046827,0.00020209301,0.00020275309,0.00058009196,0.0002087869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018572401,0.00074901077,0.0014383702,0.00008320115,0.00003233826,0.00005782086,0.00006272296,0.00015228248,0.9926237,0.000047321264,0.00007818582,0.002818015],"study_design_scores_gemma":[0.00039253032,0.028099507,0.0521234,0.000037576665,0.00013944259,0.00055449957,0.00016576788,0.0026952624,0.91306484,0.000091260845,0.0026201787,0.000015759972],"about_ca_topic_score_codex":0.0009938513,"about_ca_topic_score_gemma":0.0012351372,"teacher_disagreement_score":0.0011125263,"about_ca_system_score_codex":0.00020643647,"about_ca_system_score_gemma":0.00016133967,"threshold_uncertainty_score":0.0037217736},"labels":[],"label_agreement":null},{"id":"W4389741250","doi":"10.1038/s41541-023-00786-9","title":"A Pvs25 mRNA vaccine induces complete and durable transmission-blocking immunity to Plasmodium vivax","year":2023,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Malaria Research and Control","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; Mahidol University","keywords":"Immunogenicity; Vaccination; Virology; Immunity; Adjuvant; Plasmodium vivax; Antigen; Malaria vaccine; Antibody; Immunology; Medicine; Biology; Immune system; Malaria; Plasmodium falciparum","score_opus":0.031408227518312286,"score_gpt":0.2965979429239622,"score_spread":0.2651897154056499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389741250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541,0.0005550505,0.002577499,0.000059038037,0.00003574628,0.000038493614,0.000101517704,0.00009795326,0.0011247102],"genre_scores_gemma":[0.9962703,0.00037716492,0.0015120821,0.00005410359,0.0000132596915,0.000028717433,0.00028931975,0.000016566002,0.0014383051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987936,0.000010880962,0.000008948745,0.000028669536,0.000032054453,0.000040050567],"domain_scores_gemma":[0.9999417,0.000010887618,0.000019577146,0.000004758921,0.000008616825,0.000014518492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009933206,0.00038813494,0.00021497034,0.00016877904,0.00009679495,0.00015174106,0.00014432523,0.00020077259,0.00086986454],"category_scores_gemma":[0.00014073432,0.000107082626,0.0001776645,0.00007816774,0.00025252622,0.00016670222,0.0001320474,0.00044753533,0.00017276402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009024855,0.000038955743,0.00006667826,0.000036866135,0.0000034152338,0.00002480361,0.00001209836,0.00024651637,0.9974032,0.000061192084,0.00005186019,0.001964061],"study_design_scores_gemma":[0.000037294827,0.002329849,0.0021116198,0.000009786761,0.000031213396,0.00014149008,0.000020004674,0.0020292439,0.99047583,0.00004251451,0.0027639198,0.0000072449025],"about_ca_topic_score_codex":0.000602483,"about_ca_topic_score_gemma":0.00061636674,"teacher_disagreement_score":0.00086986454,"about_ca_system_score_codex":0.00022528613,"about_ca_system_score_gemma":0.00021461069,"threshold_uncertainty_score":0.002910018},"labels":[],"label_agreement":null},{"id":"W4390590878","doi":"10.1038/s41541-023-00798-5","title":"Antigen self-anchoring onto bacteriophage T5 capsid-like particles for vaccine design","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"French Infrastructure for Integrated Structural Biology; Institut Gustave-Roussy; Région Auvergne-Rhône-Alpes; Centre National de la Recherche Scientifique; Ministère de l'Enseignement Supérieur et de la Recherche; Ministère de l'Enseignement Supérieur, de la Recherche, de la Science et de la Technologie; Fondation pour la Recherche Médicale; Agence Nationale de la Recherche; Infrastructures en Biologie Santé et Agronomie","keywords":"Capsid; Bacteriophage; Anchoring; Antigen; Virology; Virus; Biology; Immunology; Psychology; Genetics; Escherichia coli; Gene","score_opus":0.04349389332449875,"score_gpt":0.3363061749469195,"score_spread":0.29281228162242073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390590878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9289193,0.003041743,0.06440375,0.00013475229,0.00007083929,0.00013565422,0.00016440496,0.00024243782,0.0028870157],"genre_scores_gemma":[0.97150975,0.0011492948,0.025313102,0.000060788785,0.000010264175,0.00004206125,0.00016133723,0.000025999872,0.0017274015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994683,0.000012195431,0.0000037984234,0.000011339002,0.000014668108,0.000011195],"domain_scores_gemma":[0.9999616,0.000005953265,0.000012363694,0.0000036621639,0.0000064807045,0.000009921508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012144597,0.0002699469,0.00010477692,0.00012812225,0.000068073576,0.00025398924,0.00018895305,0.00024389794,0.0007270638],"category_scores_gemma":[0.00012550602,0.00011771855,0.00017068177,0.00009777132,0.00014870513,0.00018779383,0.00015531685,0.00028032987,0.00043778948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016895068,0.00001244604,0.00007123625,0.000049367587,0.0000034192717,0.000028653247,0.000007868064,0.00062550796,0.99663395,0.00028789614,0.00003941167,0.0022232605],"study_design_scores_gemma":[0.000013315567,0.00038442062,0.0005145308,0.000013000589,0.000012344835,0.0001029044,0.00001376927,0.0042063906,0.9896316,0.00017202373,0.004929489,0.000006139685],"about_ca_topic_score_codex":0.0003704784,"about_ca_topic_score_gemma":0.0005187085,"teacher_disagreement_score":0.0007270638,"about_ca_system_score_codex":0.0002715968,"about_ca_system_score_gemma":0.00018742605,"threshold_uncertainty_score":0.0024322271},"labels":[],"label_agreement":null},{"id":"W4391924268","doi":"10.1038/s41541-024-00837-9","title":"Author Correction: A Pvs25 mRNA vaccine induces complete and durable transmission-blocking immunity to Plasmodium vivax","year":2024,"lang":"en","type":"erratum","venue":"npj Vaccines","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"","keywords":"Blocking (statistics); Immunity; Virology; Plasmodium vivax; Transmission (telecommunications); Biology; Immunology; Computer science; Malaria; Plasmodium falciparum; Immune system; Telecommunications; Computer network","score_opus":0.019404692417931586,"score_gpt":0.2763095273204715,"score_spread":0.2569048349025399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391924268","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004547338,0.00081474404,0.0011558648,0.03957521,0.95442975,0.000017709639,0.0005602792,0.0002588665,0.0027329067],"genre_scores_gemma":[0.04900611,0.015364957,0.012778842,0.0961995,0.3822932,0.00018112377,0.0036060927,0.0020539598,0.43851635],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99834085,0.00021644759,0.00026629347,0.00030643647,0.00071053865,0.00015944433],"domain_scores_gemma":[0.99180704,0.002516077,0.00037791647,0.0003835326,0.0044843955,0.00043096754],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018015458,0.001341303,0.0009498902,0.0015801303,0.001744633,0.0017851723,0.0016947727,0.0040833605,0.02692311],"category_scores_gemma":[0.021874573,0.00066556275,0.0008036259,0.00088178256,0.0011889146,0.0011545296,0.0009015924,0.0072320653,0.015008064],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005767213,0.000013376902,0.00013078365,0.00014367871,0.000015813937,0.0009725526,0.00004304023,0.00006807281,0.00027033826,0.0009813294,0.98507035,0.012232827],"study_design_scores_gemma":[0.000033821114,0.000032336015,0.00075774064,0.00020872774,0.000052032752,0.0023742064,0.000087979075,0.0003458859,0.0017100051,0.0012047802,0.99315506,0.00003741397],"about_ca_topic_score_codex":0.007167657,"about_ca_topic_score_gemma":0.009881213,"teacher_disagreement_score":0.99591666,"about_ca_system_score_codex":0.0018674432,"about_ca_system_score_gemma":0.0020736263,"threshold_uncertainty_score":0.09006679},"labels":[],"label_agreement":null},{"id":"W4391960257","doi":"10.1038/s41541-024-00821-3","title":"Multivalent cytomegalovirus glycoprotein B nucleoside modified mRNA vaccines did not demonstrate a greater antibody breadth","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; Johns Hopkins University; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Cancer Prevention and Research Institute of Texas; Sanofi; Welch Foundation; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Virology; Human cytomegalovirus; Immunogenicity; Biology; Antibody; Genotype; Virus; Immunology; Gene; Genetics","score_opus":0.0388765723189052,"score_gpt":0.3386480184115112,"score_spread":0.29977144609260603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391960257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99356776,0.0013747055,0.002769061,0.000074520096,0.000068590525,0.000035162717,0.000084018444,0.00005790909,0.0019684192],"genre_scores_gemma":[0.9955916,0.0005301894,0.0013755071,0.00009874009,0.00002763811,0.000033117914,0.00018492276,0.000017522592,0.0021407406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998056,0.000018858123,0.000014449874,0.00006201584,0.00004945102,0.000049653092],"domain_scores_gemma":[0.9998989,0.000027316008,0.000017163084,0.000015345822,0.000019822639,0.000021408789],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012702741,0.00038596516,0.00028569548,0.00014353948,0.00008622245,0.00025784585,0.00013828612,0.00032414772,0.0013615057],"category_scores_gemma":[0.0001438375,0.00012088237,0.00018565754,0.000059449394,0.00019075768,0.00027125157,0.00018778382,0.00080150407,0.00030523687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007962562,0.0000364641,0.00014692509,0.000033659646,0.00000588159,0.0000144765845,0.000014710055,0.00006512838,0.9969117,0.00008093649,0.00002622296,0.0025843398],"study_design_scores_gemma":[0.000042726042,0.0027255446,0.0039831093,0.000015349386,0.00006740636,0.00033942328,0.00003415109,0.0010606082,0.98713595,0.00012604689,0.0044644866,0.000005237718],"about_ca_topic_score_codex":0.00039764916,"about_ca_topic_score_gemma":0.00053041446,"teacher_disagreement_score":0.0013615057,"about_ca_system_score_codex":0.00025658996,"about_ca_system_score_gemma":0.00014633316,"threshold_uncertainty_score":0.0045547485},"labels":[],"label_agreement":null},{"id":"W4393928391","doi":"10.1038/s41541-024-00865-5","title":"Potent and long-lasting humoral and cellular immunity against varicella zoster virus induced by mRNA-LNP vaccine","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunology; Medicine; Immune system; Virology; Shingles; Immunogenicity; Immunization; Varicella zoster virus; Antigen; Vaccination; Virus; Immunity; Chickenpox; Cellular immunity; Varicella vaccine","score_opus":0.017667107684282733,"score_gpt":0.269002008481395,"score_spread":0.25133490079711224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393928391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963387,0.00089613575,0.0013999558,0.00006180657,0.00006143007,0.000072324285,0.00015620378,0.000057337533,0.00095611333],"genre_scores_gemma":[0.9960962,0.000552373,0.0013139186,0.00012510511,0.0000346542,0.00007657286,0.0004622001,0.000010440067,0.0013284511],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997825,0.000035177854,0.00001797993,0.000032639706,0.00004874427,0.00008296158],"domain_scores_gemma":[0.99990606,0.00002073906,0.000023482375,0.00001099359,0.000019678688,0.000019051497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020913717,0.00058178854,0.00030333846,0.00026260663,0.00011796239,0.00023037556,0.00017754865,0.00047539617,0.0014262545],"category_scores_gemma":[0.00017832979,0.00011529848,0.00029830553,0.00009649471,0.00021179061,0.00025726974,0.00020711526,0.00081802555,0.00030804306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027694323,0.00021058989,0.00026415224,0.0000953519,0.000008320489,0.000044366527,0.000020223175,0.00015565063,0.9959781,0.00004019734,0.00005978515,0.0028462366],"study_design_scores_gemma":[0.00015084584,0.011539811,0.0074097374,0.000035339308,0.00007537399,0.00039885883,0.00007925347,0.0014337278,0.97552186,0.00008475334,0.0032584674,0.0000121024095],"about_ca_topic_score_codex":0.00020935864,"about_ca_topic_score_gemma":0.00025141943,"teacher_disagreement_score":0.0014262545,"about_ca_system_score_codex":0.00016885743,"about_ca_system_score_gemma":0.00013827557,"threshold_uncertainty_score":0.004771292},"labels":[],"label_agreement":null},{"id":"W4394014785","doi":"10.1038/s41541-024-00862-8","title":"Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"SLAC National Accelerator Laboratory; Biological and Environmental Research; Basic Energy Sciences; National Institute of Allergy and Infectious Diseases; International AIDS Vaccine Initiative; National Institute of General Medical Sciences; University of California, San Francisco; Bill and Melinda Gates Foundation; Office of Science; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; European Commission; U.S. Department of Energy; European Molecular Biology Organization; National Institutes of Health; Aids Fonds","keywords":"Trimer; Virology; Gp41; Hemagglutinin (influenza); Glycoprotein; Biology; Recombinant DNA; Antibody; Chemistry; Computational biology; Genetics; Virus; Gene; Dimer; Epitope","score_opus":0.022532346713783055,"score_gpt":0.29737494497441846,"score_spread":0.2748425982606354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394014785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89444035,0.009188021,0.08820691,0.00047933927,0.00029337578,0.0005517143,0.0005529237,0.0003816458,0.005905797],"genre_scores_gemma":[0.90512127,0.003785613,0.083652124,0.0003547924,0.00006679051,0.00033697434,0.00061047013,0.00005972133,0.006012098],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984455,0.00003907822,0.000010699817,0.000022591988,0.00005638501,0.000026628704],"domain_scores_gemma":[0.9999286,0.000008746831,0.000026409163,0.000008953052,0.000009309888,0.00001792848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025363837,0.00033334774,0.0002211592,0.0004147846,0.00016830447,0.00025138134,0.00023410346,0.0005569124,0.0012489312],"category_scores_gemma":[0.0001544068,0.00018112875,0.00039212307,0.00020241314,0.00015231874,0.00030701366,0.00026419025,0.0007346513,0.0005411671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006085514,0.00006377053,0.00010668378,0.00006911962,0.000007921758,0.000046645022,0.000021620634,0.00051445124,0.99106604,0.00063666503,0.000164551,0.007241695],"study_design_scores_gemma":[0.000032069074,0.0013916532,0.00092377205,0.000019704607,0.000029422059,0.00047267636,0.000026884349,0.0028054172,0.98390293,0.0005316787,0.009850783,0.000013097126],"about_ca_topic_score_codex":0.000107071595,"about_ca_topic_score_gemma":0.00029831007,"teacher_disagreement_score":0.0012489312,"about_ca_system_score_codex":0.00030562794,"about_ca_system_score_gemma":0.00020481132,"threshold_uncertainty_score":0.004178047},"labels":[],"label_agreement":null},{"id":"W4398201969","doi":"10.1038/s41541-024-00878-0","title":"Influence of individuals’ determinants including vaccine type on cellular and humoral responses to SARS-CoV-2 vaccination","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Asthma and Lung UK; British Heart Foundation; National Institute for Health and Care Research; Rosetrees Trust; Arthritis Society; DSM Nutritional Products; British Lung Foundation; UK Research and Innovation; McKnight Foundation; Barts Charity; Diabetes UK; National Health and Medical Research Council; Cancer Research UK","keywords":"Vaccination; Immunogenicity; Immunology; Immune system; Medicine; Antibody; Humoral immunity; Virology","score_opus":0.07132878402048871,"score_gpt":0.398918145190105,"score_spread":0.3275893611696163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398201969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99941874,0.0001609207,0.000042008025,0.00001527166,0.0000068454556,0.0000033460447,0.0000880152,0.0000011424356,0.00026377442],"genre_scores_gemma":[0.9995629,0.000045822664,0.00004132349,0.000016566204,0.0000043743667,0.0000039857287,0.0000648049,0.0000016322479,0.0002584056],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995908,0.00013939461,0.000028635037,0.00009989064,0.000055042983,0.00008623882],"domain_scores_gemma":[0.9991371,0.00026891674,0.00023769804,0.00007888672,0.00008898261,0.00018838339],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004954814,0.00017640486,0.0002636427,0.000247535,0.0002158253,0.00044829954,0.00012946382,0.00027074077,0.0014938625],"category_scores_gemma":[0.0014332981,0.0001505321,0.00025647282,0.00031812236,0.00018373165,0.0002566088,0.00021567718,0.00032358267,0.00023847507],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018086028,0.00019130572,0.98606396,0.000024485846,0.00010762004,0.00019231619,0.00025262643,0.00008511385,0.0070834383,0.00003077872,0.00008882088,0.004070793],"study_design_scores_gemma":[0.0000038461694,0.0005194177,0.9987987,0.000002138255,0.00002007913,0.00010713306,0.00008097725,0.000065036766,0.00025200186,0.000011722745,0.00013655095,0.0000023884666],"about_ca_topic_score_codex":0.0015712364,"about_ca_topic_score_gemma":0.0019097195,"teacher_disagreement_score":0.0015712364,"about_ca_system_score_codex":0.00012720353,"about_ca_system_score_gemma":0.00014054416,"threshold_uncertainty_score":0.004997492},"labels":[],"label_agreement":null},{"id":"W4398475394","doi":"10.1038/s41541-024-00870-8","title":"Intranasal vaccination with an NDV-vectored SARS-CoV-2 vaccine protects against Delta and Omicron challenges","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Manitoba; Occupational and Environmental Medical Association of Canada; Public Health Agency of Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Public Health Agency; Public Health Agency of Canada","keywords":"Vaccination; Virology; Nasal administration; Virus; Medicine; Coronavirus disease 2019 (COVID-19); Attenuated vaccine; Newcastle disease; Immunology; Disease; Biology; Infectious disease (medical specialty); Virulence; Gene","score_opus":0.04261619788641036,"score_gpt":0.3370323285064731,"score_spread":0.2944161306200627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398475394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99633455,0.0006937152,0.0016911607,0.00010021607,0.00006660859,0.00004926628,0.0001360519,0.00006058457,0.0008678228],"genre_scores_gemma":[0.9945186,0.00067895174,0.0020699452,0.00007784854,0.000019827396,0.00002826611,0.00029280686,0.000009412637,0.0023045193],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991286,0.000009591919,0.000006442043,0.000028355968,0.000017089627,0.000025752572],"domain_scores_gemma":[0.9999534,0.000005532574,0.000015205636,0.0000069829516,0.000006845356,0.0000120250015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000139363,0.00030787865,0.00029683256,0.00013076032,0.000091890965,0.00017889624,0.00015791241,0.00031767137,0.0010580004],"category_scores_gemma":[0.00010362066,0.00007641219,0.00016265093,0.00004960722,0.0001522862,0.00021528867,0.00013230211,0.00053485495,0.00024205669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023576505,0.00029879852,0.00057199766,0.000050057777,0.000008767255,0.000032891272,0.00002054771,0.000095872594,0.99356514,0.00005459,0.000084916865,0.0049805096],"study_design_scores_gemma":[0.00011398728,0.0144310305,0.015855607,0.0000410754,0.00005247114,0.00051265303,0.00012402714,0.0017675468,0.9617294,0.0001048046,0.005256666,0.000010698575],"about_ca_topic_score_codex":0.000483129,"about_ca_topic_score_gemma":0.0010387661,"teacher_disagreement_score":0.0010580004,"about_ca_system_score_codex":0.0001534687,"about_ca_system_score_gemma":0.00022725474,"threshold_uncertainty_score":0.0035393834},"labels":[],"label_agreement":null},{"id":"W4399771944","doi":"10.1038/s41541-024-00901-4","title":"Evaluation of mRNA-LNP and adjuvanted protein SARS-CoV-2 vaccines in a maternal antibody mouse model","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Immune system; Antibody; Immunology; Messenger RNA; Medicine; Virology; Coronavirus; Recombinant DNA; Biology; Coronavirus disease 2019 (COVID-19); Gene; Infectious disease (medical specialty); Disease","score_opus":0.06838645722014682,"score_gpt":0.40415001896357144,"score_spread":0.33576356174342464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399771944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98463815,0.0021660086,0.009147928,0.00038303155,0.00026846785,0.0006413593,0.0007846966,0.00027114848,0.0016991365],"genre_scores_gemma":[0.9731699,0.004098009,0.012944791,0.0003152429,0.000097168864,0.0014040358,0.0013385054,0.00007812885,0.006554147],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999471,0.00010267032,0.000038598864,0.00012028586,0.00013118314,0.00013621754],"domain_scores_gemma":[0.9996846,0.000049196497,0.00009014771,0.000035386685,0.000056459387,0.0000842908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007398951,0.0011918175,0.00078218034,0.00075363676,0.00025721284,0.00042301146,0.0005209836,0.001046304,0.0011088976],"category_scores_gemma":[0.00028442196,0.00028993853,0.00052366534,0.000246062,0.00051312364,0.0006196482,0.0002296825,0.0019241194,0.00037563354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001151529,0.0015416114,0.00020558994,0.00014059822,0.00002230014,0.00007254832,0.000042262127,0.0003910219,0.9920249,0.00022194239,0.00016364365,0.0040220837],"study_design_scores_gemma":[0.00030564528,0.02545151,0.0010246079,0.000026341675,0.00009423875,0.00018746922,0.000043585922,0.001351195,0.96756625,0.0001053667,0.0038304038,0.000013343036],"about_ca_topic_score_codex":0.00064053765,"about_ca_topic_score_gemma":0.000998098,"teacher_disagreement_score":0.0011918175,"about_ca_system_score_codex":0.0005451467,"about_ca_system_score_gemma":0.0005922331,"threshold_uncertainty_score":0.0039553046},"labels":[],"label_agreement":null},{"id":"W4399799471","doi":"10.1038/s41541-024-00899-9","title":"Mucosal bivalent live attenuated vaccine protects against human metapneumovirus and respiratory syncytial virus in mice","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Respiratory viral infections research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; Agence Nationale de la Recherche; Government of Canada; Région Auvergne-Rhône-Alpes; Centre National de la Recherche Scientifique; Association Nationale de la Recherche et de la Technologie; Université Laval","keywords":"Human metapneumovirus; Virology; Bronchiolitis; Metapneumovirus; Bivalent (engine); Virus; Biology; Nasal administration; Human Parainfluenza Virus; Paramyxoviridae; Respiratory system; Immunology; Respiratory tract infections; Viral disease; Chemistry","score_opus":0.04460518470034996,"score_gpt":0.3613063478122304,"score_spread":0.31670116311188046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399799471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99175805,0.0018827915,0.0038143275,0.00013123303,0.00008672668,0.00012461409,0.0005356511,0.00020627001,0.0014601912],"genre_scores_gemma":[0.9906719,0.0011901236,0.0033336945,0.000121625046,0.00003610688,0.00010148149,0.0009379576,0.000030301037,0.0035767676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976534,0.000034336525,0.000017853914,0.00006711107,0.000046305686,0.00006903068],"domain_scores_gemma":[0.9998907,0.000011173977,0.00003655228,0.000017934264,0.000012049399,0.000031577118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028924661,0.0008066227,0.00035411076,0.00045994075,0.00012499403,0.0003043854,0.0002955801,0.0006156197,0.00080025056],"category_scores_gemma":[0.00013146282,0.00021152808,0.0003538504,0.00011039832,0.00021012136,0.00031636964,0.00022742686,0.0010405811,0.0002762564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033567657,0.00023434918,0.00021512761,0.000042581276,0.0000126169625,0.000024071182,0.000013651403,0.00012965786,0.99638414,0.000099373065,0.00005467309,0.0024542012],"study_design_scores_gemma":[0.000103319486,0.008125282,0.0044532237,0.000029244135,0.00007139934,0.00030325959,0.00003744022,0.00162861,0.9812414,0.00009665943,0.003902464,0.0000077714385],"about_ca_topic_score_codex":0.00047585092,"about_ca_topic_score_gemma":0.00058416446,"teacher_disagreement_score":0.0008066227,"about_ca_system_score_codex":0.0002360586,"about_ca_system_score_gemma":0.00024412852,"threshold_uncertainty_score":0.002677083},"labels":[],"label_agreement":null},{"id":"W4400455764","doi":"10.1038/s41541-024-00917-w","title":"Author Correction: Mucosal bivalent live attenuated vaccine protects against human metapneumovirus and respiratory syncytial virus in mice","year":2024,"lang":"en","type":"erratum","venue":"npj Vaccines","topic":"Respiratory viral infections research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Human metapneumovirus; Bivalent (engine); Virology; Metapneumovirus; Attenuated vaccine; Respiratory system; Virus; Medicine; Immunology; Biology; Respiratory tract infections; Chemistry; Gene; Internal medicine","score_opus":0.049329989355213835,"score_gpt":0.3647657201594861,"score_spread":0.3154357308042723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400455764","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036408647,0.0010101608,0.00067396066,0.030319832,0.9648281,0.00001784371,0.00033136827,0.00021283649,0.0022418185],"genre_scores_gemma":[0.039704155,0.01810404,0.009315215,0.08461139,0.41574967,0.0002094509,0.0023264536,0.0017254982,0.4282541],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.997303,0.0003719123,0.00041857996,0.00040860448,0.0012405984,0.00025723438],"domain_scores_gemma":[0.98704356,0.0031332178,0.0007439586,0.0005993833,0.007852641,0.00062718434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025050365,0.0014139047,0.0010816848,0.0017512734,0.0019659034,0.0023738253,0.0019756726,0.005060375,0.021674592],"category_scores_gemma":[0.024964053,0.0007231085,0.0010247221,0.0009923058,0.0014828263,0.0012483828,0.00093889266,0.0073536118,0.014873343],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059481677,0.000010778894,0.00010814061,0.000120445635,0.000015001735,0.00070812716,0.000033259766,0.00005746148,0.00023878686,0.00072350446,0.98875976,0.009165267],"study_design_scores_gemma":[0.000035017652,0.00003801319,0.0006588466,0.00022075427,0.000049353188,0.0016362605,0.00008200221,0.00029871898,0.0015993613,0.0007547312,0.99459076,0.00003619158],"about_ca_topic_score_codex":0.0073186997,"about_ca_topic_score_gemma":0.008856747,"teacher_disagreement_score":0.021674592,"about_ca_system_score_codex":0.002621184,"about_ca_system_score_gemma":0.0030600938,"threshold_uncertainty_score":0.07250875},"labels":[],"label_agreement":null},{"id":"W4401586032","doi":"10.1038/s41541-024-00934-9","title":"COVID-19 and influenza vaccine uptake among pregnant women in national cohorts of England and Wales","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"COVID-19 Impact on Reproduction","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Health and Social Care Research and Development Division; Economic and Social Research Council; Medical Research Council; Chief Scientist Office, Scottish Government Health and Social Care Directorate; University of Oxford; Engineering and Physical Sciences Research Council; UK Research and Innovation; Swansea University; Queen's University; Alan Turing Institute; Queen's University Belfast; Imperial College London; Scottish Government; Department of Health and Social Care; Wellcome Trust","keywords":"Vaccination; Medicine; Pandemic; Psychological intervention; Pregnancy; Ethnic group; Influenza vaccine; Coronavirus disease 2019 (COVID-19); Seasonal influenza; H1n1 pandemic; Family medicine; Demography; Environmental health; Immunology; Internal medicine; Biology; Nursing","score_opus":0.028376319388109746,"score_gpt":0.33822928678236686,"score_spread":0.3098529673942571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401586032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641764,0.0005206256,0.00009367718,0.00020966599,0.0000103765415,0.000030780913,0.0018305777,0.000003126935,0.00088347634],"genre_scores_gemma":[0.9982097,0.00026112652,0.00011787047,0.00012367395,0.0000048013726,0.00006535888,0.0007317932,0.0000033284946,0.0004824334],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99862444,0.00044585933,0.00022945007,0.00026332232,0.00015667712,0.00028030673],"domain_scores_gemma":[0.9980311,0.0003938944,0.00082060834,0.00016909791,0.00031103,0.00027433355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017040953,0.00020802862,0.00039118464,0.00086094,0.0004191937,0.00058185344,0.00045106673,0.0003931854,0.0015596219],"category_scores_gemma":[0.006440366,0.00042316632,0.0005277593,0.0012098022,0.00027200932,0.00073266396,0.0011134513,0.0004965213,0.00031700128],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000837404,0.00001837637,0.9961876,0.00004657367,0.000054167558,0.000078071906,0.00086794555,0.00003257095,0.0001462103,0.00004885023,0.00042528057,0.0020106647],"study_design_scores_gemma":[0.0000037581597,0.000032634103,0.999079,0.00003051927,0.000012123519,0.00007717,0.00037037535,0.00006902469,0.000024790137,0.000017017695,0.0002803536,0.0000032668524],"about_ca_topic_score_codex":0.13046694,"about_ca_topic_score_gemma":0.1458178,"teacher_disagreement_score":0.13046694,"about_ca_system_score_codex":0.0011809045,"about_ca_system_score_gemma":0.00087132084,"threshold_uncertainty_score":0.2594151},"labels":[],"label_agreement":null},{"id":"W4402271312","doi":"10.1038/s41541-024-00944-7","title":"M2e nanovaccines supplemented with recombinant hemagglutinin protect chickens against heterologous HPAI H5N1 challenge","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Manitoba; Université du Québec à Montréal; Public Health Agency of Canada; Canadian Food Inspection Agency","funders":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; International Development Research Centre; Canadian Food Inspection Agency; Global Affairs Canada; Bill and Melinda Gates Foundation","keywords":"Influenza A virus subtype H5N1; Virology; Hemagglutinin (influenza); Ectodomain; Virus; Biology; Heterologous; Viral matrix protein; Viral shedding; H5N1 genetic structure; Influenza A virus; Highly pathogenic; Antibody; Microbiology; Genetics; Medicine; Disease; Gene; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19)","score_opus":0.050070420981109455,"score_gpt":0.3465795883094754,"score_spread":0.2965091673283659,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402271312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977604,0.0007484116,0.00073813496,0.00002789765,0.000038158996,0.000019512509,0.000059788443,0.000025034708,0.0005826742],"genre_scores_gemma":[0.99592006,0.00040891866,0.0019538356,0.000049446444,0.000012945423,0.00003401767,0.00013997346,0.000011079386,0.0014697176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991584,0.000012435294,0.000006785744,0.000021500815,0.000026121425,0.0000172798],"domain_scores_gemma":[0.99994826,0.000009646096,0.000012984563,0.0000036936576,0.0000108600125,0.000014550538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010414468,0.00025952468,0.00021628488,0.00011527714,0.000069702,0.00012602734,0.00014884204,0.00032178764,0.00055647484],"category_scores_gemma":[0.00012239438,0.000084763495,0.0001738101,0.00004268576,0.00012104906,0.00020453948,0.000117086034,0.0002529754,0.00010086451],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021260568,0.00007336155,0.00013089515,0.00003972798,0.0000068988306,0.0000097164675,0.000008527519,0.000073325245,0.9977277,0.000014876441,0.000026487947,0.0016758094],"study_design_scores_gemma":[0.000028747256,0.0024024285,0.0024439723,0.00000860346,0.000027726815,0.000055946177,0.000023374965,0.00079545774,0.9927084,0.0000149328935,0.0014854978,0.0000050237495],"about_ca_topic_score_codex":0.00077601045,"about_ca_topic_score_gemma":0.0016708473,"teacher_disagreement_score":0.00077601045,"about_ca_system_score_codex":0.0001459565,"about_ca_system_score_gemma":0.00012369853,"threshold_uncertainty_score":0.0018615723},"labels":[],"label_agreement":null},{"id":"W4403033006","doi":"10.1038/s41541-024-00976-z","title":"Bivalent norovirus mRNA vaccine elicits cellular and humoral responses protecting human enteroids from GII.4 infection","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Emory University","keywords":"Bivalent (engine); Norovirus; Virology; Immune system; Messenger RNA; Biology; Immunology; Neutralization; Virus; Gene; Chemistry; Genetics","score_opus":0.0384174268889387,"score_gpt":0.3443815976145118,"score_spread":0.30596417072557314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403033006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99585503,0.00044480103,0.0023002764,0.00008181021,0.000043042473,0.000044639608,0.00007310998,0.00004973937,0.0011074718],"genre_scores_gemma":[0.99608624,0.0003390181,0.0015287264,0.000061038474,0.000015701053,0.0000310714,0.00020554192,0.000009469103,0.0017231607],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998884,0.000020095955,0.0000076119836,0.000021930053,0.000026492431,0.000035465902],"domain_scores_gemma":[0.99993503,0.000013594839,0.000014098322,0.00000816821,0.000016680622,0.00001248892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014195581,0.00031150848,0.00023102752,0.0001301509,0.00008066184,0.00021473454,0.00011097218,0.00027105844,0.0010983198],"category_scores_gemma":[0.00018454123,0.00008284696,0.00014423153,0.000048848466,0.00018300118,0.00014412691,0.00018453208,0.00042877867,0.00022600192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001547796,0.000051693005,0.00027466717,0.00003601231,0.0000038495236,0.00003708024,0.000016890222,0.00010039767,0.99658954,0.000047333317,0.000043069744,0.0026447237],"study_design_scores_gemma":[0.000057174435,0.004046837,0.0051562586,0.000013208728,0.000039909544,0.00032772342,0.00010179234,0.0011445017,0.98551834,0.000074491334,0.0035127136,0.000006963937],"about_ca_topic_score_codex":0.0004290753,"about_ca_topic_score_gemma":0.0005473637,"teacher_disagreement_score":0.0010983198,"about_ca_system_score_codex":0.00018706077,"about_ca_system_score_gemma":0.00021711175,"threshold_uncertainty_score":0.0036742091},"labels":[],"label_agreement":null},{"id":"W4403734640","doi":"10.1038/s41541-024-00986-x","title":"Vaccine-induced human monoclonal antibodies to PfRH5 show broadly neutralizing activity against P. falciparum clinical isolates","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; Fogarty International Center; Agence Universitaire de la Francophonie; National Institute of General Medical Sciences; African Union; National Institute of Allergy and Infectious Diseases; European Commission; African Academy of Sciences; Yale University; African Union Commission; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Monoclonal antibody; Virology; Antibody; Biology; Immunology","score_opus":0.0722853062204186,"score_gpt":0.41146521032564354,"score_spread":0.3391799041052249,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403734640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948921,0.0010993656,0.0021839458,0.00008454617,0.00002509469,0.000057615853,0.0004878652,0.00009856426,0.0010708425],"genre_scores_gemma":[0.99361235,0.0005981879,0.0020097003,0.00013326161,0.000019063404,0.00007922114,0.0022628685,0.000025091753,0.0012602346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965596,0.00008249264,0.00003000429,0.00006559655,0.00007620923,0.00008969072],"domain_scores_gemma":[0.99980575,0.00006710571,0.00002752309,0.00002664469,0.00004460623,0.000028469249],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029179623,0.00046158957,0.00032779487,0.0001619102,0.00008682931,0.00019443587,0.00024892404,0.0002886623,0.0010901641],"category_scores_gemma":[0.00036562575,0.00014435343,0.00022792396,0.00013051443,0.0001574765,0.00011729187,0.00018507763,0.0008535413,0.00033338522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015188848,0.00012397618,0.00027286325,0.00005605829,0.000012878205,0.000019247575,0.000015538912,0.0001365728,0.99734217,0.000020515276,0.00013325675,0.0017149355],"study_design_scores_gemma":[0.000059912312,0.0026302382,0.008991665,0.000011120385,0.000046784295,0.00028859838,0.000019063813,0.0012157338,0.98413426,0.000026210795,0.0025711225,0.000005155564],"about_ca_topic_score_codex":0.00080573116,"about_ca_topic_score_gemma":0.0008852037,"teacher_disagreement_score":0.0010901641,"about_ca_system_score_codex":0.000296935,"about_ca_system_score_gemma":0.00015531566,"threshold_uncertainty_score":0.0036469698},"labels":[],"label_agreement":null},{"id":"W4404437513","doi":"10.1038/s41541-024-01010-y","title":"Implications of the apparent extinction of B/Yamagata-lineage human influenza viruses","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Department of Health and Aged Care, Australian Government; Australian Government","keywords":"Lineage (genetic); Virology; Extinction (optical mineralogy); Biology; Genetics; Gene; Paleontology","score_opus":0.15050019501949488,"score_gpt":0.44360234324658004,"score_spread":0.29310214822708514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404437513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76422954,0.08373263,0.0016849075,0.096444756,0.0012014849,0.00004144607,0.0002358221,0.000025894322,0.052403614],"genre_scores_gemma":[0.9692478,0.02096702,0.00043734437,0.0056737103,0.00041929018,0.000010601989,0.000059760154,0.000004653826,0.003179899],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99945575,0.00026746895,0.000023651899,0.000082383674,0.00005373174,0.00011693558],"domain_scores_gemma":[0.99875605,0.00052399904,0.00033064143,0.000043972275,0.00018030593,0.00016505834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015498336,0.00016403852,0.0001675837,0.00025472164,0.0009315441,0.0012134237,0.00042976407,0.0011427249,0.0030389978],"category_scores_gemma":[0.00294538,0.000088695095,0.00015936015,0.00015731936,0.0019169617,0.0008697444,0.00080204307,0.0013720727,0.0003168665],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004817632,0.0004608871,0.3693311,0.0018079709,0.00024283039,0.022298623,0.008117992,0.0044623427,0.07437905,0.08192098,0.025440864,0.40671968],"study_design_scores_gemma":[0.0001343388,0.0023719964,0.5393702,0.0019008501,0.0003014074,0.024424339,0.05626682,0.0028247954,0.021460943,0.07986449,0.27093205,0.00014782425],"about_ca_topic_score_codex":0.008660039,"about_ca_topic_score_gemma":0.008899334,"teacher_disagreement_score":0.008660039,"about_ca_system_score_codex":0.0009862657,"about_ca_system_score_gemma":0.001722828,"threshold_uncertainty_score":0.017219305},"labels":[],"label_agreement":null},{"id":"W4404466274","doi":"10.1038/s41541-024-01022-8","title":"Obesity does not influence SARS-CoV-2 humoral vaccine immunogenicity","year":2024,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; McGill University; Ottawa Hospital","funders":"Canadian Institutes of Health Research; University of Ottawa","keywords":"Immunogenicity; Medicine; Immunology; Vaccination; Antibody; Humoral immunity; Immune system; Virology; Obesity; Immunity; Dosing; Internal medicine","score_opus":0.03412982864408574,"score_gpt":0.3531373967045311,"score_spread":0.31900756806044533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404466274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99814785,0.00048921595,0.00023860317,0.00007762839,0.000014134686,0.000006197128,0.0001346281,0.000004291643,0.00088747207],"genre_scores_gemma":[0.99923325,0.00012110627,0.00011702802,0.000039841125,0.0000067439382,0.000003109043,0.00009464176,0.0000034647678,0.00038087688],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996326,0.00015078,0.000021722208,0.000062187566,0.000063682695,0.000069079404],"domain_scores_gemma":[0.99878746,0.0003525816,0.00051563693,0.00011782875,0.00006516256,0.00016134582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009364104,0.00017279829,0.00018835638,0.00015053696,0.00013595348,0.0004151408,0.00011671572,0.00020894883,0.0015141114],"category_scores_gemma":[0.0017171327,0.00014357097,0.00037152672,0.00017764635,0.00019210236,0.00026309153,0.00018991977,0.0003598078,0.00017808324],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031345212,0.00024602292,0.9564968,0.00005957151,0.00038197523,0.0001550041,0.00009894289,0.0003288586,0.0242995,0.00012694176,0.0002014506,0.014470338],"study_design_scores_gemma":[0.00000908944,0.0008464117,0.9973126,0.000008463584,0.00009092478,0.000114752955,0.000033147142,0.00019109166,0.0009984578,0.00003279291,0.00035949584,0.0000027157448],"about_ca_topic_score_codex":0.0014438825,"about_ca_topic_score_gemma":0.0026523948,"teacher_disagreement_score":0.0015141114,"about_ca_system_score_codex":0.00011923988,"about_ca_system_score_gemma":0.0002995766,"threshold_uncertainty_score":0.0050652027},"labels":[],"label_agreement":null},{"id":"W4406204688","doi":"10.1038/s41541-025-01062-8","title":"A bivalent COVID-19 mRNA vaccine elicited broad immune responses and protection against Omicron subvariants infection","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Alberta Children's Hospital; University of Calgary; Sinai Health System; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; Providence Health Care","funders":"Canadian Institutes of Health Research; Chinese Academy of Sciences; Government of Canada","keywords":"Immunogenicity; Virology; Immune system; Vaccination; Biology; Bivalent (engine); Immunology; Chemistry","score_opus":0.03645693661294504,"score_gpt":0.3570997862259819,"score_spread":0.32064284961303685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406204688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996824,0.00042014182,0.001505518,0.00005151027,0.00003617963,0.000039396786,0.000114893584,0.00004016807,0.00096820755],"genre_scores_gemma":[0.99589926,0.00038189458,0.0012720304,0.000054468543,0.000025667701,0.000037337133,0.00039882393,0.000009084309,0.0019214003],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999846,0.000017397664,0.000013273744,0.000039168564,0.00003260914,0.00005153312],"domain_scores_gemma":[0.99994266,0.00000650867,0.000016581162,0.0000077526465,0.000010064898,0.000016475913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016374754,0.00045293977,0.00024954494,0.00017830003,0.00010666458,0.00016739333,0.00015094907,0.00026805722,0.0008148747],"category_scores_gemma":[0.00011273103,0.000093807685,0.00014436278,0.000086698004,0.00019241619,0.00020076014,0.00018678416,0.0006101284,0.00020090242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012315092,0.00009319327,0.00020493439,0.00002907264,0.000004328208,0.000016555015,0.000010814665,0.000085373984,0.9973658,0.000048647085,0.000048609847,0.0019696164],"study_design_scores_gemma":[0.00010757754,0.0071805515,0.014094903,0.000017821934,0.0000539283,0.00045807546,0.000056299363,0.0017109652,0.971305,0.00009528796,0.0049109817,0.000008593043],"about_ca_topic_score_codex":0.00035903888,"about_ca_topic_score_gemma":0.00059545867,"teacher_disagreement_score":0.0008148747,"about_ca_system_score_codex":0.0002713928,"about_ca_system_score_gemma":0.00018529817,"threshold_uncertainty_score":0.002726078},"labels":[],"label_agreement":null},{"id":"W4406406978","doi":"10.1038/s41541-024-01054-0","title":"Rational selection of TbpB variants yields a bivalent vaccine with broad coverage against Neisseria gonorrhoeae","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Toronto","keywords":"Bivalent (engine); Neisseria gonorrhoeae; Biology; Virology; Microbiology; Chemistry","score_opus":0.010092023705338276,"score_gpt":0.2750192084691418,"score_spread":0.2649271847638035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406406978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99274653,0.0004496447,0.0055438895,0.00007184058,0.000017008848,0.000054056225,0.000084423555,0.0000472046,0.000985318],"genre_scores_gemma":[0.99143463,0.00043349096,0.0068010776,0.000052451804,0.0000054016386,0.00003085671,0.0001897009,0.000020930607,0.0010312757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999877,0.000019407616,0.00001005825,0.000021174932,0.000039767267,0.000032576485],"domain_scores_gemma":[0.99995375,0.0000068820996,0.0000145102795,0.0000050596295,0.000008357279,0.000011470993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014963052,0.0003081729,0.00023060103,0.00019625336,0.00010866073,0.00030122628,0.00019772271,0.00020782583,0.00062688655],"category_scores_gemma":[0.00019089323,0.00012579274,0.00014425807,0.00015900467,0.00014191966,0.00013357798,0.0002521485,0.00037599268,0.00020311397],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011278022,0.00009847087,0.00039424028,0.000019856985,0.000007842546,0.000061819796,0.000014635201,0.00090310565,0.9939068,0.00013279509,0.00006322705,0.004284367],"study_design_scores_gemma":[0.000041963056,0.0018922847,0.0021080046,0.000011911038,0.000040780003,0.00041176134,0.000052084553,0.006268885,0.985468,0.00007416133,0.0036195973,0.000010640982],"about_ca_topic_score_codex":0.00036959542,"about_ca_topic_score_gemma":0.0008762664,"teacher_disagreement_score":0.00062688655,"about_ca_system_score_codex":0.00014951984,"about_ca_system_score_gemma":0.00015873047,"threshold_uncertainty_score":0.0020971894},"labels":[],"label_agreement":null},{"id":"W4407574409","doi":"10.1038/s41541-025-01070-8","title":"LmCen−/− based vaccine is protective against canine visceral leishmaniasis following three natural exposures in Tunisia","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Wellcome Trust","keywords":"Visceral leishmaniasis; Leishmaniasis; Natural (archaeology); Virology; Medicine; Immunology; Geography","score_opus":0.015723577200894286,"score_gpt":0.30681736214502664,"score_spread":0.29109378494413235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407574409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996501,0.00012412414,0.00004450343,0.000024236952,0.0000040979307,0.000006975078,0.000028321872,0.0000038279695,0.00011384277],"genre_scores_gemma":[0.99915373,0.00013321468,0.000093438626,0.00004617984,0.000004379078,0.000010867819,0.00012489372,9.849172e-7,0.00043230352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998977,0.000020743022,0.000008572783,0.000023590886,0.000014968319,0.00003433341],"domain_scores_gemma":[0.99993026,0.00000771178,0.00002392944,0.00000651943,0.000011342037,0.000020229281],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021905241,0.00018017585,0.0001571444,0.000094197254,0.00013036541,0.0002247624,0.00017145477,0.00021791374,0.00051692623],"category_scores_gemma":[0.00017483816,0.000110688525,0.00012408364,0.00004860479,0.00019398736,0.00013010946,0.00010544073,0.0003330047,0.0000732482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023332415,0.00083384366,0.021624837,0.00015157164,0.000058985454,0.00026886183,0.000213403,0.00051010767,0.96422213,0.00008715017,0.00025100718,0.009444808],"study_design_scores_gemma":[0.0004780499,0.045594834,0.44530147,0.00010092823,0.00023223822,0.0017437371,0.00074498024,0.0029313217,0.49219468,0.00011964464,0.010536996,0.000021111688],"about_ca_topic_score_codex":0.0027673128,"about_ca_topic_score_gemma":0.0034613803,"teacher_disagreement_score":0.0027673128,"about_ca_system_score_codex":0.00045961622,"about_ca_system_score_gemma":0.00019720814,"threshold_uncertainty_score":0.0055024624},"labels":[],"label_agreement":null},{"id":"W4407744191","doi":"10.1038/s41541-025-01089-x","title":"iDC-targeting PfCSP mRNA vaccine confers superior protection against Plasmodium compared to conventional mRNA","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Center for Scientific Review; U.S. Department of Health and Human Services","keywords":"Messenger RNA; Virology; Biology; Medicine; Gene; Genetics","score_opus":0.012809981707097053,"score_gpt":0.25673562765362934,"score_spread":0.2439256459465323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407744191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870883,0.0012579818,0.0077010547,0.00021743594,0.00008626203,0.000064558306,0.00036953605,0.00017621453,0.00303865],"genre_scores_gemma":[0.9918526,0.00078919576,0.0042239,0.000087603985,0.000027724109,0.000027211014,0.0005092788,0.000020119902,0.00246248],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991477,0.000009649409,0.0000054690227,0.000022415079,0.000024661713,0.000023044468],"domain_scores_gemma":[0.9999596,0.000006178784,0.000011354026,0.0000043058253,0.00000795719,0.000010669976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009450541,0.00028991667,0.0001919513,0.00011222993,0.000069907896,0.00014339107,0.00010026144,0.0001615164,0.0010178835],"category_scores_gemma":[0.00008376408,0.00006220536,0.00011058123,0.0000696436,0.00016962444,0.00012253183,0.00009063008,0.00047581957,0.0002035465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000728666,0.000034191286,0.00008887001,0.000028775972,0.0000022329841,0.000013345708,0.000004089178,0.00007666804,0.9970186,0.000067260306,0.00005400267,0.0025392335],"study_design_scores_gemma":[0.00002391313,0.0011165541,0.001621669,0.000004801505,0.000017164197,0.0001592582,0.000008091987,0.0009927799,0.9933408,0.000032259133,0.0026798425,0.0000029044522],"about_ca_topic_score_codex":0.00044420062,"about_ca_topic_score_gemma":0.0007560178,"teacher_disagreement_score":0.0010178835,"about_ca_system_score_codex":0.00025625748,"about_ca_system_score_gemma":0.00021514871,"threshold_uncertainty_score":0.0034052134},"labels":[],"label_agreement":null},{"id":"W4408960446","doi":"10.1038/s41541-025-01104-1","title":"Virus detection by short read high throughput sequencing in a high virus low cellular background","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Throughput; Virus; Virology; Biology; Computer science; Telecommunications","score_opus":0.009527771414210873,"score_gpt":0.2398480324286936,"score_spread":0.23032026101448272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408960446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.602546,0.0017236152,0.37772745,0.0005044408,0.00034087716,0.00068704505,0.0041777017,0.0057917265,0.006501116],"genre_scores_gemma":[0.6766205,0.0010951892,0.30556267,0.00094742957,0.000112240625,0.0009016976,0.007146801,0.0008960144,0.0067174044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9935813,0.001687382,0.00032183126,0.00144968,0.0026651872,0.00029457564],"domain_scores_gemma":[0.99595344,0.0014564283,0.0004605575,0.0004667269,0.0014979208,0.00016485405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0048956117,0.001108159,0.00083134085,0.0012026163,0.0006836874,0.0020169627,0.0009248556,0.0012574495,0.002150979],"category_scores_gemma":[0.0036747027,0.00054184295,0.00074437616,0.00079727406,0.0010641002,0.0008079935,0.0008565514,0.0012671056,0.0016261945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018110721,0.00006436887,0.0024604546,0.00016533195,0.00004910853,0.00008442574,0.00012561044,0.0010726227,0.9896291,0.00029709077,0.00030441638,0.0055664186],"study_design_scores_gemma":[0.000014341726,0.0005072908,0.0037509163,0.000030768024,0.000070962815,0.00018378673,0.00009614169,0.010894857,0.98016435,0.00035831006,0.003895992,0.000032296066],"about_ca_topic_score_codex":0.0012390374,"about_ca_topic_score_gemma":0.0027834135,"teacher_disagreement_score":0.0048956117,"about_ca_system_score_codex":0.0007757147,"about_ca_system_score_gemma":0.0009376826,"threshold_uncertainty_score":0.025890768},"labels":[],"label_agreement":null},{"id":"W4409592399","doi":"10.1038/s41541-025-01120-1","title":"Systematic review and meta-analysis of interventions to increase the uptake of vaccines recommended during pregnancy","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Vaccine Coverage and Hesitancy","field":"Social Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institutes of Health; Ottawa Hospital Research Institute; National Institute of Allergy and Infectious Diseases; University of San Francisco; University of Ottawa","keywords":"Psychological intervention; Medicine; Meta-analysis; Vaccination; Pregnancy; Systematic review; Randomized controlled trial; Incentive; Pediatrics; Obstetrics; MEDLINE; Internal medicine; Immunology; Nursing; Economics","score_opus":0.054699571469313125,"score_gpt":0.3614813135218499,"score_spread":0.3067817420525368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409592399","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004252162,0.991831,0.00096613506,0.0002894763,0.00038445814,0.0011631079,0.00061813125,0.000049945967,0.0004456053],"genre_scores_gemma":[0.20123057,0.7864773,0.004799114,0.0012490686,0.00039979594,0.004414088,0.00087214675,0.00005039722,0.0005075421],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9739612,0.016241921,0.0056995424,0.0015326327,0.002131216,0.00043354498],"domain_scores_gemma":[0.9616398,0.02993598,0.004852324,0.0009865505,0.0022518588,0.00033357405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.023807658,0.0032089131,0.02226353,0.008043062,0.0007380631,0.0034503415,0.00218311,0.0025169968,0.005437243],"category_scores_gemma":[0.07547385,0.0017112235,0.035139494,0.0066294996,0.0010129893,0.0019334197,0.001590249,0.0024680826,0.00039701472],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002148216,0.000039854942,0.0010569941,0.5150232,0.4684878,0.000076051554,0.00005054442,0.00050077506,0.0001467206,0.00016565388,0.0005999892,0.011704199],"study_design_scores_gemma":[0.0016976359,0.00038339192,0.0021816294,0.06123981,0.9317994,0.000060910246,0.000038375918,0.00023980171,0.00019178263,0.00028661502,0.0018573663,0.000023173247],"about_ca_topic_score_codex":0.009700686,"about_ca_topic_score_gemma":0.015633916,"teacher_disagreement_score":0.023807658,"about_ca_system_score_codex":0.005088619,"about_ca_system_score_gemma":0.0065710717,"threshold_uncertainty_score":0.12590843},"labels":[],"label_agreement":null},{"id":"W4410075842","doi":"10.1038/s41541-025-01146-5","title":"An mRNA vaccine provides effective protection against Duck Tembusu Virus infection","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Virology; Virus; Messenger RNA; Biology; Gene; Genetics","score_opus":0.006174587257862766,"score_gpt":0.2760855432624345,"score_spread":0.26991095600457177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410075842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878131,0.0015765595,0.0077043683,0.00020712407,0.00008339076,0.000069437985,0.00016564602,0.00010272618,0.0022775938],"genre_scores_gemma":[0.99013585,0.00090568844,0.005511595,0.000106019994,0.00002288151,0.000038773087,0.00031326138,0.000014365688,0.0029514893],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989784,0.00001567865,0.000008413508,0.000022869894,0.000025419075,0.000029722898],"domain_scores_gemma":[0.99995863,0.0000063732364,0.000011904151,0.0000034811658,0.0000104766605,0.000009059732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001253484,0.00032440244,0.00021811933,0.0001432969,0.0001052846,0.00019505626,0.00010195316,0.00029052983,0.000894121],"category_scores_gemma":[0.00013951524,0.000074481824,0.00013478388,0.000050630228,0.00016434459,0.0001944038,0.00018207055,0.00032490047,0.00022102364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059449245,0.00003292493,0.00020283775,0.00007034583,0.000003838652,0.000041997962,0.00001194513,0.00015319555,0.9944945,0.000098157885,0.000067683446,0.004763163],"study_design_scores_gemma":[0.000034237095,0.0021028619,0.0030065912,0.000020533374,0.000033818054,0.00028491253,0.00004668129,0.001931754,0.9855833,0.000075882934,0.0068719084,0.000007613871],"about_ca_topic_score_codex":0.0005209747,"about_ca_topic_score_gemma":0.0008941324,"teacher_disagreement_score":0.000894121,"about_ca_system_score_codex":0.00023598323,"about_ca_system_score_gemma":0.0002238522,"threshold_uncertainty_score":0.00299114},"labels":[],"label_agreement":null},{"id":"W4410455350","doi":"10.1038/s41541-025-01151-8","title":"Durable T cell immunity to COVID-19 vaccines in MS patients on B cell depletion therapy","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Sanofi Genzyme; National Institutes of Health; TG Therapeutics; National Institute of General Medical Sciences; University of Pennsylvania; Novo Nordisk; National Multiple Sclerosis Society; Horizon Therapeutics; Genentech; Novartis Pharmaceuticals Corporation; Multiple Sclerosis Society; Atara Biotherapeutics; Biogen; Celgene; EMD Serono; Alexion Pharmaceuticals; Eli Lilly and Company; U.S. Department of Defense; Sanofi; GlaxoSmithKline; Multiple Sclerosis Society of Canada; Amgen","keywords":"Coronavirus disease 2019 (COVID-19); Immunity; Virology; 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Immunology; Cell therapy; Cell mediated immunity; Cell; Biology; Immune system; Outbreak; Internal medicine; Disease; Infectious disease (medical specialty); Genetics","score_opus":0.030670359062834714,"score_gpt":0.3435058486765491,"score_spread":0.3128354896137144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410455350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99850583,0.00036263373,0.00009527353,0.000060615817,0.000009201503,0.000029796865,0.00005294766,0.000009075709,0.0008747031],"genre_scores_gemma":[0.9991574,0.00012367147,0.00008810353,0.000089456575,0.000011112339,0.000018753066,0.00013098499,0.000002058862,0.00037856845],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998367,0.000035930392,0.000019721247,0.000033269527,0.000025489082,0.000048919883],"domain_scores_gemma":[0.9997408,0.000050613344,0.000051839448,0.000018077575,0.000043577824,0.00009507313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031365262,0.00019874357,0.0005663289,0.0003267079,0.00042916858,0.00039207225,0.00012319529,0.00037295843,0.0011719916],"category_scores_gemma":[0.00056837295,0.00010117874,0.00017548837,0.000235502,0.00021075824,0.00027525733,0.00021164489,0.00047329746,0.00031287342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.032530192,0.0049930383,0.41816092,0.00031634275,0.00019681339,0.0041040974,0.0012160091,0.0006014881,0.34293392,0.00028595052,0.0018467718,0.19281444],"study_design_scores_gemma":[0.0013181174,0.06175561,0.8748272,0.00011385764,0.0003582003,0.008134075,0.00065581535,0.0016138272,0.04037085,0.0003496284,0.010465178,0.000037550348],"about_ca_topic_score_codex":0.00062723854,"about_ca_topic_score_gemma":0.00066380267,"teacher_disagreement_score":0.0011719916,"about_ca_system_score_codex":0.0002809742,"about_ca_system_score_gemma":0.000278763,"threshold_uncertainty_score":0.003920734},"labels":[],"label_agreement":null},{"id":"W4412178048","doi":"10.1038/s41541-025-01209-7","title":"Immunogenicity and protective efficacy of an intranasal neuraminidase-based influenza vaccine with bacterial cell membrane-derived adjuvants","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Immunogenicity; Neuraminidase; Nasal administration; Virology; Microbiology; Neuraminidase inhibitor; Influenza vaccine; Medicine; Adjuvant; Immunology; Biology; Vaccination; Immune system; Virus; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Disease","score_opus":0.0260876432003614,"score_gpt":0.3264118066909618,"score_spread":0.3003241634906004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412178048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986083,0.0005237459,0.0003844787,0.000018598888,0.000010356333,0.000011766608,0.00004024926,0.0000064720507,0.0003960047],"genre_scores_gemma":[0.9986778,0.00025646316,0.000489599,0.000018246126,0.0000075697694,0.000011868488,0.000114345305,0.0000025504044,0.00042148493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998908,0.000023735718,0.000008770891,0.000016468084,0.000029956407,0.00003018448],"domain_scores_gemma":[0.99993014,0.000014962211,0.000011234138,0.00000891897,0.000017410131,0.000017365805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002211535,0.0002156671,0.00017127357,0.00009619062,0.000074800344,0.00013884556,0.00009050217,0.00020672737,0.0004923102],"category_scores_gemma":[0.00020423254,0.00006296619,0.00011884202,0.00005097186,0.000148118,0.00016497937,0.00009187799,0.000348646,0.00012111705],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025302602,0.00009420815,0.0003766512,0.000020401962,0.000004060838,0.000015715501,0.000011413781,0.00005667525,0.9977277,0.000020817075,0.000008198957,0.0014111772],"study_design_scores_gemma":[0.000052983574,0.0067070615,0.016697386,0.0000103148,0.000051412244,0.00033209551,0.000044028013,0.0010092651,0.9740471,0.00006309501,0.000981029,0.000004130816],"about_ca_topic_score_codex":0.00034948456,"about_ca_topic_score_gemma":0.00028164312,"teacher_disagreement_score":0.0004923102,"about_ca_system_score_codex":0.00013462653,"about_ca_system_score_gemma":0.00015455631,"threshold_uncertainty_score":0.0016469359},"labels":[],"label_agreement":null},{"id":"W4412464627","doi":"10.1038/s41541-025-01213-x","title":"IL-12 mRNA-LNP promotes dermal resident memory CD4+ T cell development","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada); University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Pennsylvania","keywords":"Messenger RNA; Cell biology; Biology; Computational biology; Genetics; Gene","score_opus":0.009946391016748794,"score_gpt":0.222523362789985,"score_spread":0.2125769717732362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412464627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880442,0.001718434,0.0047639213,0.00021010656,0.00013944582,0.000083884755,0.00030210827,0.00027746925,0.0044604256],"genre_scores_gemma":[0.99031734,0.000798177,0.0036769507,0.00009677455,0.00005346397,0.000051541134,0.00028351814,0.000045232053,0.0046768836],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984694,0.000031504147,0.000010387381,0.000035596142,0.000026322097,0.000049229035],"domain_scores_gemma":[0.9999006,0.000025614456,0.000017818087,0.000009664633,0.000010856367,0.000035523914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012565043,0.0004215761,0.00023277914,0.00024279565,0.00008947416,0.0002928469,0.00009931132,0.00023036236,0.002903064],"category_scores_gemma":[0.00013395835,0.00011512039,0.00015283507,0.00008314224,0.00020015445,0.00018402796,0.00015851238,0.0008011536,0.0006859073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011512885,0.000083881845,0.000121861856,0.00005710913,0.0000020229243,0.00003662535,0.000012128083,0.00008828203,0.99587667,0.000045993496,0.00006318143,0.003496989],"study_design_scores_gemma":[0.000059778362,0.002250164,0.0032510108,0.00002042541,0.000022789975,0.00017760474,0.000054967197,0.0012531462,0.9890513,0.000077694465,0.0037769182,0.000004220351],"about_ca_topic_score_codex":0.0002538912,"about_ca_topic_score_gemma":0.0006489401,"teacher_disagreement_score":0.002903064,"about_ca_system_score_codex":0.00018930814,"about_ca_system_score_gemma":0.00022972477,"threshold_uncertainty_score":0.009711742},"labels":[],"label_agreement":null},{"id":"W4413436368","doi":"10.1038/s41541-025-01231-9","title":"Metavac-RSV mucosal bivalent vaccine candidate protects cotton rats against pneumoviruses and is produced using serum-free cell culture in bioreactor","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Respiratory viral infections research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Institut National de la Santé et de la Recherche Médicale; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Agence Nationale de la Recherche; Medical Research Council; Région Auvergne-Rhône-Alpes; Centre National de la Recherche Scientifique; Université Claude Bernard Lyon 1; Association Nationale de la Recherche et de la Technologie; Université Laval","keywords":"Bivalent (engine); Bioreactor; Virology; Chemistry; Microbiology; Immunology; Biology; Botany","score_opus":0.030240008968659936,"score_gpt":0.34152220302861974,"score_spread":0.3112821940599598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413436368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9764375,0.0015802227,0.018696537,0.00008826736,0.0000622759,0.0001594961,0.0007920771,0.00027503216,0.0019086336],"genre_scores_gemma":[0.97748077,0.00093456113,0.016721947,0.0000423217,0.000020060796,0.00010221911,0.0013037407,0.000042393604,0.003351914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983895,0.000021213296,0.000012481171,0.000036081936,0.000063339176,0.000027885178],"domain_scores_gemma":[0.9999361,0.000008313174,0.000022586044,0.000010492394,0.000011083549,0.000011444478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021929397,0.00046683804,0.00025979552,0.00026332267,0.0001323488,0.00026970817,0.00025834094,0.00026447073,0.0008454444],"category_scores_gemma":[0.00010973155,0.00013226502,0.00030253697,0.00014099652,0.00011720074,0.00018852977,0.00019718803,0.00045441338,0.0003916744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001781678,0.000010171726,0.000057449568,0.000012681113,0.0000012218351,0.000011204563,0.0000030735482,0.000048291186,0.9991998,0.000018083136,0.000009814927,0.0006103638],"study_design_scores_gemma":[0.0000036465792,0.00028699628,0.00074193365,0.0000034782367,0.000008924595,0.00006781512,0.0000066603893,0.0004964286,0.99692816,0.000010437323,0.0014431218,0.0000024075744],"about_ca_topic_score_codex":0.00052172254,"about_ca_topic_score_gemma":0.00087234593,"teacher_disagreement_score":0.0008454444,"about_ca_system_score_codex":0.00025666776,"about_ca_system_score_gemma":0.00022938334,"threshold_uncertainty_score":0.0028282404},"labels":[],"label_agreement":null},{"id":"W4416535322","doi":"10.1038/s41541-025-01316-5","title":"Electroporation and LNP-mediated delivery of plasmid DNA-encoded H5N1 influenza virus hemagglutinin support protection against highly pathogenic avian influenza","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Microbial Inactivation Methods","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health","keywords":"Influenza A virus subtype H5N1; Hemagglutinin (influenza); Plasmid; DNA vaccination; Clade; Electroporation; Antigen; Antigenic drift; Virus; Influenza A virus","score_opus":0.01497130433564736,"score_gpt":0.27892558341923357,"score_spread":0.2639542790835862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416535322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9783967,0.0010210577,0.018332755,0.00016710105,0.00004057327,0.000057296827,0.000116165305,0.000104515726,0.0017638981],"genre_scores_gemma":[0.98556376,0.00056136044,0.010228389,0.000054848384,0.000009117194,0.000049116003,0.00019942567,0.000017303704,0.0033166795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999918,0.00001657705,0.0000061590895,0.000020198884,0.000024916235,0.000014091575],"domain_scores_gemma":[0.9999542,0.00001098957,0.000016451375,0.000004491302,0.000005466912,0.000008417658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012762086,0.00020659712,0.00008571908,0.00009180495,0.000075361095,0.00014244855,0.00015137081,0.00022144131,0.0005477181],"category_scores_gemma":[0.0001386524,0.00008570854,0.00012218158,0.00004621175,0.00020297109,0.0001731737,0.00016264334,0.00033326895,0.00018306784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022322985,0.000010964462,0.00005697819,0.000016952301,0.0000013705662,0.00000926504,0.0000062966487,0.00004811108,0.99849963,0.00006300707,0.000011642305,0.0012534038],"study_design_scores_gemma":[0.0000052366577,0.0002095847,0.00068623904,0.0000025837244,0.0000047911135,0.000066951274,0.0000062792924,0.00046644232,0.99730206,0.000025837655,0.0012224135,0.0000016597611],"about_ca_topic_score_codex":0.00033212642,"about_ca_topic_score_gemma":0.00044738306,"teacher_disagreement_score":0.0005477181,"about_ca_system_score_codex":0.00022887801,"about_ca_system_score_gemma":0.00013500745,"threshold_uncertainty_score":0.0018322468},"labels":[],"label_agreement":null},{"id":"W4416690654","doi":"10.1038/s41541-025-01176-z","title":"Investigating a role for NSAIDs in the pathophysiology of vaccine-associated myocarditis","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Myocarditis; Pathophysiology; Risk factor; Disease","score_opus":0.016964290264764356,"score_gpt":0.32515953867280223,"score_spread":0.30819524840803786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416690654","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3966563,0.5468556,0.010157093,0.024516331,0.0034845518,0.00053133577,0.00064265885,0.000095495525,0.017060682],"genre_scores_gemma":[0.7359656,0.23077452,0.009656565,0.011572828,0.0053100935,0.0002832256,0.0005394919,0.0000218708,0.0058757816],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99941957,0.00020489961,0.00009401596,0.00007538274,0.00010625177,0.000099844474],"domain_scores_gemma":[0.998638,0.0005224103,0.00031977444,0.00011978237,0.0002844998,0.00011552495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018745691,0.00042800256,0.00067066104,0.00091775146,0.00038505028,0.0011270795,0.0005476372,0.0015613523,0.0025243114],"category_scores_gemma":[0.002412182,0.00020690444,0.0010016827,0.00050162757,0.0004999714,0.0015441536,0.00059453066,0.0012687492,0.0005178637],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0097852675,0.0028353534,0.303591,0.02004766,0.0029307182,0.014795554,0.002408512,0.0014947434,0.1087968,0.018876271,0.018209426,0.4962287],"study_design_scores_gemma":[0.002146795,0.019144664,0.3961517,0.010739362,0.006926438,0.028068196,0.005897767,0.007006421,0.059924204,0.037958346,0.4257536,0.00028251146],"about_ca_topic_score_codex":0.00082025403,"about_ca_topic_score_gemma":0.0009753737,"teacher_disagreement_score":0.0025243114,"about_ca_system_score_codex":0.00042651859,"about_ca_system_score_gemma":0.0011315515,"threshold_uncertainty_score":0.009913743},"labels":[],"label_agreement":null},{"id":"W4416976611","doi":"10.1038/s41541-025-01326-3","title":"Polyvalent mRNA vaccine targeting outer surface protein C affords multi-strain protection against Lyme disease","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Public Health Agency of Canada; University of Saskatchewan; University of Ottawa; Health Canada","funders":"National Institute of Allergy and Infectious Diseases; Health Canada; National Institutes of Health; Government of Canada","keywords":"Lyme disease; Antibody; Messenger RNA; Antibody response; Antigen; Epitope; Polyvalent Vaccine","score_opus":0.012396379762814033,"score_gpt":0.2503405998320362,"score_spread":0.23794422006922217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416976611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99252605,0.0009882821,0.004285386,0.00012168128,0.000091971866,0.000053741394,0.00011484725,0.000100657264,0.0017173492],"genre_scores_gemma":[0.9933675,0.00082585326,0.0033816,0.00009359299,0.00003481671,0.000038337406,0.00030773538,0.000018893876,0.0019316016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984646,0.000017638475,0.0000127483545,0.000032458585,0.000042688916,0.000047988244],"domain_scores_gemma":[0.99992025,0.000012512626,0.00002245275,0.00000854027,0.000013839995,0.00002240176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012185231,0.0004033998,0.00028546597,0.00026048554,0.000104101404,0.00023919214,0.00018574855,0.000314313,0.0009684575],"category_scores_gemma":[0.00013256895,0.000099645324,0.00016879401,0.000113634815,0.00022832483,0.0002548698,0.0001753569,0.000647006,0.00021795736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027059935,0.0002639654,0.00019867982,0.000065598,0.000008834136,0.000036004156,0.00001532769,0.00034023693,0.9899838,0.00013856497,0.00014694298,0.008531337],"study_design_scores_gemma":[0.00013644391,0.008820533,0.0048270915,0.000025213627,0.00008513585,0.0003347593,0.00003888232,0.0031155527,0.978285,0.00011291819,0.0042071114,0.000011409044],"about_ca_topic_score_codex":0.00047409892,"about_ca_topic_score_gemma":0.0007543133,"teacher_disagreement_score":0.0009684575,"about_ca_system_score_codex":0.00023185127,"about_ca_system_score_gemma":0.00026947298,"threshold_uncertainty_score":0.0032398105},"labels":[],"label_agreement":null},{"id":"W4417296181","doi":"10.1038/s41541-025-01314-7","title":"A multivalent capsule vaccine protects against Klebsiella pneumoniae bloodstream infections in healthy and immunocompromised mice","year":2025,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases; Washington University in St. Louis","keywords":"Klebsiella pneumoniae; Bacteremia; Antibody; Vaccination; Immune system; Immunity","score_opus":0.00502704604528995,"score_gpt":0.2550206706091334,"score_spread":0.24999362456384347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417296181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936947,0.0010854751,0.0037903644,0.00013072934,0.00004697051,0.000043537464,0.00026100437,0.00015713183,0.0007900027],"genre_scores_gemma":[0.9926587,0.0007791321,0.0033725933,0.00011114142,0.000020447229,0.000058516158,0.0005185908,0.00003451456,0.0024463136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983513,0.0000218688,0.000015572641,0.00005063661,0.00003513793,0.00004161331],"domain_scores_gemma":[0.99985087,0.000013427319,0.000060199396,0.000020894486,0.000013693258,0.00004092725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019004548,0.00046981595,0.00032798274,0.0002955167,0.00009717432,0.00026410588,0.00025443378,0.00046628635,0.00070599],"category_scores_gemma":[0.00013400588,0.0001604087,0.00020736521,0.00013139339,0.00021687175,0.0002698332,0.00019951329,0.00067838345,0.00020467486],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002769339,0.00011524114,0.00011064595,0.000035376273,0.000007782446,0.000022577575,0.000012475455,0.00012148072,0.99700874,0.00006993163,0.000043653217,0.0021752955],"study_design_scores_gemma":[0.0001130605,0.004494051,0.0040415847,0.00002166803,0.000051478328,0.00029330223,0.000028048855,0.0014292032,0.986155,0.00009628981,0.0032651448,0.000011147035],"about_ca_topic_score_codex":0.0003186022,"about_ca_topic_score_gemma":0.0003787581,"teacher_disagreement_score":0.00070599,"about_ca_system_score_codex":0.00018496066,"about_ca_system_score_gemma":0.0002580726,"threshold_uncertainty_score":0.0023617744},"labels":[],"label_agreement":null}]}