{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":143,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":143,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"58575eb15c64","filters":{"topic":"Biochemical and biochemical processes"}},"results":[{"id":"W2079359179","doi":"10.1016/j.copbio.2010.10.009","title":"The emerging role for bacteria in lignin degradation and bio-product formation","year":2010,"lang":"en","type":"article","venue":"Current Opinion in Biotechnology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":800,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Lignin; Bacteria; Laccase; Biodegradation; Chemistry; White rot; Microbial biodegradation; Lignin peroxidase; Microorganism; Biology; Enzyme; Biochemistry; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.0155205835089315,"gpt":0.2901548739010549,"spread":0.2746342903921234,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001844461,0.0001068823,0.00008719649,0.00006979444,0.00006350777,0.00001930831,0.0001727566,0.0002666136,0.000001011648],"category_scores_gemma":[0.000261794,0.00008092553,0.00002363453,0.0001513488,0.000149586,0.000007979338,0.0001086304,0.0002198148,0.000001113623],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007600771,"about_ca_system_score_gemma":0.00001814766,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003722593,"about_ca_topic_score_gemma":0.0000296493,"domain_scores_codex":[0.9992262,0.0000127468,0.0002237101,0.0002856571,0.00004270007,0.0002089551],"domain_scores_gemma":[0.9996713,0.00001844489,0.00006809687,0.0001819007,0.00003596939,0.00002432916],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003428808,0.00003261999,0.0008938667,0.00005724836,0.000001848428,1.092328e-8,0.000008394803,1.275611e-7,0.9329717,0.0007166509,0.0006309016,0.06465231],"study_design_scores_gemma":[0.0003177901,0.00004857393,0.0005693361,0.00002387322,0.000001302952,0.000004464122,0.00004527344,0.0001552952,0.8703945,0.001302732,0.1270303,0.0001064968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9903275,0.004805968,0.000306805,0.003345601,0.0008928009,0.0002816347,0.0000100575,0.00001839317,0.00001117654],"genre_scores_gemma":[0.9956299,0.003297636,0.0005194899,0.00001610853,0.0002123446,0.0000889817,0.0002196845,0.000007947513,0.000007911391],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1263994,"threshold_uncertainty_score":0.3300047,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2314153396","doi":"10.1021/jf101504v","title":"Phenolic Acids and Flavonoids in Nonfermented and Fermented Red Sorghum (Sorghum bicolor (L.) Moench)","year":2010,"lang":"en","type":"article","venue":"Journal of Agricultural and Food Chemistry","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":294,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Fermentation; Lactobacillus fermentum; Food science; Caffeic acid; Chemistry; Lactobacillus brevis; Flavonoid; Phenolic acid; Ferulic acid; Lactobacillus plantarum; Sorghum; Lactic acid; Lactobacillus; Lactobacillus reuteri; Biochemistry; Biology; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.004069954733682216,"gpt":0.1933965132750404,"spread":0.1893265585413582,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009354072,0.0002246676,0.0002570028,0.00002138612,0.0000595473,0.0000513641,0.0001409338,0.0004203204,0.0000135562],"category_scores_gemma":[0.00008484347,0.0001420657,0.00006140385,0.0001028547,0.0001920466,0.0000167272,0.0001567764,0.0005173332,2.160494e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008393955,"about_ca_system_score_gemma":0.00002667537,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002222611,"about_ca_topic_score_gemma":0.000005432934,"domain_scores_codex":[0.9989904,0.00001062455,0.0003532582,0.0002775999,0.0001302711,0.0002379181],"domain_scores_gemma":[0.9993613,0.0000110571,0.0001762222,0.00008950572,0.000137973,0.000223906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009235964,0.0001021062,0.002889591,0.000115159,0.00004553173,0.00000213249,0.00003474559,1.562915e-7,0.9957441,0.000003229685,0.0004995919,0.000471307],"study_design_scores_gemma":[0.0011541,0.0003249581,0.03614954,0.00004243814,0.00003405967,0.0004068019,0.000227796,0.000002740763,0.9602433,0.0001045748,0.001079655,0.0002300262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969351,0.001541227,0.000001643557,0.001084381,0.00005326495,0.00006846905,0.00001167142,0.000005830896,0.0002984259],"genre_scores_gemma":[0.9984915,0.0005890549,0.0001794537,0.0001182271,0.0003490605,0.0000039496,0.00003254312,0.000008289161,0.0002278992],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03550078,"threshold_uncertainty_score":0.5793273,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2006826092","doi":"10.1021/cb400505a","title":"Breaking Down Lignin to High-Value Chemicals: The Conversion of Lignocellulose to Vanillin in a Gene Deletion Mutant of <i>Rhodococcus jostii</i> RHA1","year":2013,"lang":"en","type":"article","venue":"ACS Chemical Biology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":280,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Vanillin; Lignin; Chemistry; Ferulic acid; Biochemistry; Mutant; Food science; Organic chemistry; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.006119951100927588,"gpt":0.229192849510497,"spread":0.2230728984095694,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002722259,0.0003187668,0.0005130819,0.00007396781,0.00002952697,0.00001029917,0.0007093652,0.0005965288,0.00003978227],"category_scores_gemma":[0.0007325987,0.0002253962,0.0001393645,0.000469551,0.0003230293,0.000007017804,0.0006144537,0.0002365603,0.00003884614],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003629156,"about_ca_system_score_gemma":0.00006131773,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003117007,"about_ca_topic_score_gemma":0.000002686367,"domain_scores_codex":[0.9977875,0.00008185841,0.0007444867,0.0007013513,0.000172916,0.0005118779],"domain_scores_gemma":[0.9986369,0.000157321,0.0002070878,0.000497079,0.0002796268,0.0002219787],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002235425,0.0001836797,0.0007829749,0.0000813842,0.00003583173,8.58738e-7,0.0000425925,0.000006886294,0.9959288,0.00007702029,0.001731861,0.0009045693],"study_design_scores_gemma":[0.0005915675,0.0003284232,0.0001335696,0.00006177577,0.00002353579,0.000009616135,0.00003930858,0.0000158039,0.9965268,0.0006573374,0.001313193,0.0002990235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969447,0.0004543628,0.00025383,0.001460078,0.00006789328,0.0005895193,0.00006510685,0.00001569243,0.0001487938],"genre_scores_gemma":[0.9952629,0.0001378799,0.001945938,0.002114495,0.0001782278,0.0000928359,0.0002232421,0.00002488417,0.00001966129],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001692108,"threshold_uncertainty_score":0.9191391,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2151689745","doi":"10.1039/b209686b","title":"NMR analysis of lignins in CAD-deficient plants. Part 1. Incorporation of hydroxycinnamaldehydes and hydroxybenzaldehydes into lignins","year":2002,"lang":"en","type":"article","venue":"Organic & Biomolecular Chemistry","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":164,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"","keywords":"Syringaldehyde; Monolignol; Chemistry; Lignin; Vanillin; Monomer; Guaiacol; Organic chemistry; Polymer; Aldehyde; Polymerization; Biochemistry; Biosynthesis; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.006967462231247386,"gpt":0.2063014864484989,"spread":0.1993340242172515,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001628028,0.0002979782,0.000484971,0.0001261466,0.00004120201,0.0000159192,0.0002982764,0.0004152987,0.0001103755],"category_scores_gemma":[0.000154539,0.0002861582,0.0001747871,0.0009075159,0.0003257606,0.000008435596,0.0002247297,0.0001422964,0.000002472119],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002643862,"about_ca_system_score_gemma":0.00004338046,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005350136,"about_ca_topic_score_gemma":0.00003634594,"domain_scores_codex":[0.9981344,0.0000330126,0.0006297884,0.000635069,0.0002723362,0.000295407],"domain_scores_gemma":[0.9989536,0.00001905298,0.0003113234,0.0004644797,0.0001128101,0.0001386821],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003536671,0.0003433466,0.003214128,0.000261999,0.0002827025,0.000006629315,0.0001047173,0.000006282435,0.9952386,0.00000539758,0.0001851781,0.0003156783],"study_design_scores_gemma":[0.0004763687,0.0001077408,0.0001997847,0.00006883425,0.0002171218,0.00001062447,0.00009990674,0.0006328573,0.9974593,0.00006536645,0.0003499069,0.0003121955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932396,0.004806728,0.0009794337,0.0001169256,0.00001710039,0.0001132612,0.00006872234,0.0000151766,0.0006430955],"genre_scores_gemma":[0.9983526,0.0007372425,0.000258532,0.00008811227,0.00005027322,0.00001050737,0.000378264,0.00002653891,0.00009788229],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00511309,"threshold_uncertainty_score":0.9999591,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2080685866","doi":"10.1016/s0043-1354(02)00133-1","title":"Detoxification of phenolic solutions with horseradish peroxidase and hydrogen peroxide","year":2002,"lang":"en","type":"article","venue":"Water Research","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":161,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Hydrogen peroxide; Horseradish peroxidase; Chemistry; Phenols; Phenol; Peroxidase; Aqueous solution; Polyethylene glycol; Chlorophenol; Nuclear chemistry; Detoxification (alternative medicine); Organic chemistry; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.06006313966994888,"gpt":0.2870835357329043,"spread":0.2270203960629555,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001979575,0.00008949353,0.0000890024,0.00004426044,0.0001111979,0.00001865262,0.0001575496,0.0001523153,0.00007004455],"category_scores_gemma":[0.00004609904,0.00005668508,0.00002581743,0.0001107718,0.0004175426,0.000004914731,0.0001471451,0.000171794,0.00002339976],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007767027,"about_ca_system_score_gemma":0.000008826542,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001990489,"about_ca_topic_score_gemma":0.000004480784,"domain_scores_codex":[0.9989888,0.00004722731,0.000123189,0.0002941019,0.0002063861,0.0003403143],"domain_scores_gemma":[0.9994639,0.000005210789,0.00001621567,0.0002322914,0.0001719463,0.0001104163],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004369369,0.00009708603,0.0002755396,0.00004910777,0.00001931582,8.615735e-7,0.0001038552,8.588732e-7,0.9972748,0.00001611628,0.001220371,0.0008983825],"study_design_scores_gemma":[0.0002364053,0.0002091724,0.00009864732,0.00001258157,0.000006171559,0.00001242937,0.00005554637,0.00005317209,0.9928155,0.0001272574,0.006277816,0.0000952787],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965846,0.001109184,0.00003838706,0.001574163,0.000003579622,0.0001245241,0.000006431572,0.000007467535,0.0005516887],"genre_scores_gemma":[0.9986858,0.0002473733,0.0001617503,0.00006401152,0.00008758628,0.00002762146,0.00005272122,0.00001228245,0.0006609043],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005057445,"threshold_uncertainty_score":0.231155,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2100511164","doi":"10.1002/bit.22387","title":"Bioproduction of the aroma compound 2‐Phenylethanol in a solid–liquid two‐phase partitioning bioreactor system by <i>Kluyveromyces marxianus</i>","year":2009,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"","keywords":"Kluyveromyces marxianus; Chemistry; Chromatography; Bioproduction; Bioreactor; Aqueous solution; Polymer; Partition coefficient; Aqueous two-phase system; Aroma; Chemical engineering; Organic chemistry; Yeast; Biochemistry; Saccharomyces cerevisiae; Food science","retraction":null,"screen_n_in":null,"score":{"opus":0.004143824424112481,"gpt":0.2160603774362117,"spread":0.2119165530120992,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009533417,0.0001792327,0.0001932358,0.00006006142,0.00005497109,0.00001102995,0.0002070795,0.0003856976,0.000001237116],"category_scores_gemma":[0.00004228904,0.0001350318,0.00005295859,0.0002652509,0.0002173255,0.000007424013,0.00009124541,0.0001825478,6.661184e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000166947,"about_ca_system_score_gemma":0.00001455248,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001266209,"about_ca_topic_score_gemma":0.000003105995,"domain_scores_codex":[0.9990417,0.00001468836,0.0002671322,0.0003544991,0.00007647064,0.0002455291],"domain_scores_gemma":[0.999581,0.000006378325,0.00009195158,0.000249243,0.00002940299,0.00004198003],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009781366,0.00009561655,0.0001360178,0.00007161019,0.00001875338,0.000001338717,0.00000655807,0.00000545918,0.9984791,0.0001478602,0.0001402172,0.0007996834],"study_design_scores_gemma":[0.0006299251,0.0003315991,0.0001315781,0.0001043967,0.00001546635,0.00005257154,0.00004662421,0.0001278942,0.9970117,0.00002756881,0.00134969,0.000170985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951947,0.002604572,0.0005021685,0.001330487,0.0001037637,0.0001452737,0.00002956007,0.00005831004,0.0000311825],"genre_scores_gemma":[0.9993438,0.000172272,0.0002577793,0.00007604373,0.00008134529,0.000008876068,0.00003802842,0.000009049036,0.00001288034],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004149044,"threshold_uncertainty_score":0.5506436,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1656336178","doi":"10.4315/0362-028x-68.7.1472","title":"Effect of pH on the Inhibition of Listeria spp. by Vanillin and Vanillic Acid","year":2005,"lang":"en","type":"article","venue":"Journal of Food Protection","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Vanillic acid; Vanillin; Listeria; Chemistry; Listeria monocytogenes; Food science; Antimicrobial; Minimum inhibitory concentration; Microbiology; Bacteria; Biology; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.007107553066176699,"gpt":0.220027485136612,"spread":0.2129199320704353,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003061501,0.00009078111,0.0001423831,0.00002331986,0.00002582528,0.000006791462,0.00006412096,0.0001304312,0.000007631459],"category_scores_gemma":[0.000170213,0.00005332529,0.00007816182,0.00006550084,0.00007127824,0.000006217215,0.00002478764,0.0001325806,5.386455e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008545518,"about_ca_system_score_gemma":0.00001242086,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001626877,"about_ca_topic_score_gemma":8.512097e-7,"domain_scores_codex":[0.9993702,0.00006496918,0.0002684859,0.00009673478,0.0001266077,0.00007303194],"domain_scores_gemma":[0.9994377,0.00001849547,0.0003230401,0.00007934085,0.0001077003,0.00003367619],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006531625,0.00005758246,0.00001031632,0.00008349231,0.00003234305,8.067616e-8,0.000008748879,0.000001596566,0.990827,0.000004751758,0.0007185319,0.007602346],"study_design_scores_gemma":[0.0004540698,0.005548159,0.0000216318,0.00006229577,0.00002421346,0.00002568276,0.000006705553,0.000005621662,0.9915556,0.00009380124,0.002146568,0.00005564875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970591,0.001839174,0.0003863398,0.0004512126,0.0000374189,0.0001467575,0.000009110848,0.000001740647,0.00006914189],"genre_scores_gemma":[0.9994587,0.0001742944,0.00006228081,0.0000671176,0.0002071011,0.000004702447,0.00000410323,0.000006285411,0.00001544627],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007546697,"threshold_uncertainty_score":0.2174542,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2056701864","doi":"10.1128/aem.06876-11","title":"Vanillin Catabolism in Rhodococcus jostii RHA1","year":2011,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhodococcus; Vanillin; Catabolism; Chemistry; Biochemistry; Microbiology; Biology; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.006393782344185427,"gpt":0.1635045574775129,"spread":0.1571107751333275,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005399365,0.0001763872,0.0001585669,0.00002364356,0.00003410637,0.000003723495,0.0001411637,0.0002661763,0.00008619802],"category_scores_gemma":[0.000005325004,0.0001526348,0.00003171233,0.00003503237,0.0003110876,0.000002013756,0.0002117733,0.0001151773,0.00003463367],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009318921,"about_ca_system_score_gemma":0.00000754972,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002214032,"about_ca_topic_score_gemma":0.000008134632,"domain_scores_codex":[0.9990766,0.00001393794,0.0001787977,0.0004325758,0.00002079478,0.0002772983],"domain_scores_gemma":[0.9997227,0.00000638663,0.00003992211,0.0001547733,0.000001981478,0.00007420885],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007547508,0.0001108615,0.002984704,0.000009931478,0.00001160715,0.000001829247,0.00005418167,1.394643e-7,0.9946644,0.00007680257,0.0002751775,0.001734899],"study_design_scores_gemma":[0.0005224582,0.00007668139,0.004806127,0.000003369743,0.000007693342,0.00003488982,0.00009727097,4.923085e-7,0.9799989,0.0003142107,0.01391138,0.0002265129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962936,0.001524936,0.00004146154,0.00002847846,0.00004174672,0.0001276959,0.00005687026,0.000008275837,0.001876909],"genre_scores_gemma":[0.9975529,0.0006391278,0.0004954988,0.0006351597,0.00006887539,0.00002348137,0.0004760378,0.000014473,0.00009442294],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01466547,"threshold_uncertainty_score":0.6224267,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3137032084","doi":"10.1016/j.ymben.2021.02.005","title":"Metabolism of syringyl lignin-derived compounds in Pseudomonas putida enables convergent production of 2-pyrone-4,6-dicarboxylic acid","year":2021,"lang":"en","type":"article","venue":"Metabolic Engineering","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Department of Energy","keywords":"Pseudomonas putida; Lignin; Chemistry; Depolymerization; Biocatalysis; Organic chemistry; Biochemistry; Stereochemistry; Enzyme; Catalysis; Reaction mechanism","retraction":null,"screen_n_in":null,"score":{"opus":0.006502720124494814,"gpt":0.2041616635719477,"spread":0.1976589434474529,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001650494,0.0002162395,0.0004459565,0.00008153962,0.00001595374,0.000007356422,0.0001945121,0.0001779099,0.00001109375],"category_scores_gemma":[0.0003258907,0.0002091716,0.0001341117,0.0004032603,0.00008399796,0.00000818999,0.0001665072,0.0001405399,0.000001117424],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008033174,"about_ca_system_score_gemma":0.00007648582,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002220443,"about_ca_topic_score_gemma":0.000004763604,"domain_scores_codex":[0.9986327,0.00002914434,0.0004602446,0.0004044209,0.0001938075,0.0002796269],"domain_scores_gemma":[0.9992779,0.00001131587,0.0001148257,0.0003308966,0.0001812198,0.00008379648],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002558909,0.0001344413,0.0004877259,0.0002549386,0.00009448088,0.000002135742,0.0000408808,0.0002822775,0.9981561,0.0001567225,0.00009665536,0.0002680106],"study_design_scores_gemma":[0.0004156452,0.00002140795,0.00182261,0.00006173913,0.00004674965,0.00001337728,0.00004184829,0.000082038,0.9920986,0.00003069371,0.005154305,0.000210997],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9736359,0.02540161,0.0003194425,0.0001027214,0.0002892029,0.0001051564,0.00001026164,0.00001802387,0.0001176714],"genre_scores_gemma":[0.995415,0.001781852,0.00236165,0.00002955239,0.0002174549,0.00002146901,0.00006908476,0.00002602248,0.00007788093],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02361976,"threshold_uncertainty_score":0.8529768,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2888423730","doi":"10.1016/j.fm.2018.08.009","title":"Metabolism of phenolic acids in whole wheat and rye malt sourdoughs","year":2018,"lang":"en","type":"article","venue":"Food Microbiology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ferulic acid; Fermentation; Lactic acid; Food science; Lactobacillus plantarum; Metabolism; Phenolic acid; Vanillic acid; Chemistry; Biochemistry; Yeast; Bacteria; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.006547364542950172,"gpt":0.2181280451848336,"spread":0.2115806806418835,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000879232,0.0001679992,0.0002533472,0.00004787568,0.00002839314,0.000005781962,0.0001986581,0.0004764421,0.00002778654],"category_scores_gemma":[0.00006226871,0.000140577,0.000053751,0.0001220252,0.0005454181,0.000002981909,0.0002332828,0.0001399206,0.00001339057],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004643507,"about_ca_system_score_gemma":0.00003480145,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001123016,"about_ca_topic_score_gemma":0.00003782307,"domain_scores_codex":[0.9989867,0.00003643026,0.0002492963,0.0003987612,0.00002658041,0.0003022235],"domain_scores_gemma":[0.9995607,0.00001048973,0.00006955097,0.0002129657,0.00008551217,0.00006079602],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001243972,0.00006518548,0.001026276,0.0000374406,0.00003273796,3.361228e-7,0.00004733803,6.63202e-8,0.9965549,0.00005686903,0.00150165,0.0005527829],"study_design_scores_gemma":[0.0006113364,0.0005076238,0.0005196315,0.00001408137,0.00001269401,0.00003245433,0.00003138899,7.001938e-7,0.926757,0.0002988004,0.07105355,0.0001607539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936128,0.005212936,0.00004918933,0.0004328737,0.00009233478,0.0001002977,0.00009115802,0.000008510901,0.0003999261],"genre_scores_gemma":[0.9981596,0.000108709,0.0005321535,0.0005569594,0.0002739942,0.000008816447,0.0001397556,0.00001373747,0.0002062124],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06979793,"threshold_uncertainty_score":0.5732564,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1703425911","doi":"10.1111/j.1574-6941.2010.00942.x","title":"Monitoring the plant epiphyte Methylobacterium extorquens DSM 21961 by real-time PCR and its influence on the strawberry flavor","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Biotechnology Research Institute","funders":"Österreichische Forschungsförderungsgesellschaft","keywords":"Biology; Methylobacterium; Bacteria; Fragaria; Colonization; Flavor; Biosynthesis; Botany; Food science; Microbiology; Biochemistry; Enzyme; 16S ribosomal RNA","retraction":null,"screen_n_in":null,"score":{"opus":0.007165412801398901,"gpt":0.2166230721297151,"spread":0.2094576593283162,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003107266,0.0003215602,0.0002745162,0.0000233369,0.0002603775,0.00003009255,0.0005984851,0.0007618667,0.00007836106],"category_scores_gemma":[0.0003308589,0.0001868393,0.00008234445,0.00008330821,0.0006752698,0.000005776436,0.0003243214,0.0006086563,0.00007638329],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001286558,"about_ca_system_score_gemma":0.00006149109,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001806171,"about_ca_topic_score_gemma":0.00002783048,"domain_scores_codex":[0.998316,0.0001407041,0.0003000596,0.0006385905,0.00004636771,0.000558287],"domain_scores_gemma":[0.9989491,0.0002587916,0.0001584063,0.0004214459,0.0001028801,0.0001094543],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009867454,0.00005935858,0.001224172,0.00001178658,0.00006971324,0.000002590112,0.00002415496,4.10326e-7,0.9927501,0.00004239197,0.005461354,0.0002552853],"study_design_scores_gemma":[0.0002485665,0.0002683491,0.00362149,0.0000100933,0.00002431741,0.0001151938,0.00002099685,0.000002933553,0.9665875,0.00007715291,0.02877292,0.0002504311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954903,0.0006245045,9.765329e-7,0.002513364,0.0004571687,0.000306249,0.0002352497,0.00002911908,0.0003430456],"genre_scores_gemma":[0.9965198,0.0005818475,0.00005410918,0.001323678,0.0004588613,0.00007263604,0.0001807489,0.00002457011,0.0007837475],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02616256,"threshold_uncertainty_score":0.7619084,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2057192639","doi":"10.1128/aem.69.3.1564-1572.2003","title":"Prokaryotic Homologs of the Eukaryotic 3-Hydroxyanthranilate 3,4-Dioxygenase and 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase in the 2-Nitrobenzoate Degradation Pathway of<i>Pseudomonas fluorescens</i>Strain KU-7","year":2003,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":85,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Biotechnology Research Institute","funders":"Kansai University","keywords":"Pseudomonas fluorescens; Strain (injury); Dioxygenase; Pseudomonas; Pseudomonadales; Bacteria; Pseudomonadaceae; Degradation (telecommunications); Biochemistry; Microbiology; Chemistry; Enzyme; Biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.003880954419632142,"gpt":0.1674809348855122,"spread":0.16359998046588,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002182239,0.0002340314,0.0002542494,0.0000270403,0.00006440243,0.000006258747,0.0002197669,0.0002645092,0.000009043807],"category_scores_gemma":[0.0000305986,0.0001469244,0.00006771252,0.00009077574,0.0008885639,0.000004077053,0.0001430241,0.0001798021,9.292543e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001131391,"about_ca_system_score_gemma":0.00002585929,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001429734,"about_ca_topic_score_gemma":0.000008273203,"domain_scores_codex":[0.9987929,0.0001142282,0.0003476642,0.0004097485,0.00006321236,0.0002721987],"domain_scores_gemma":[0.9994863,0.00004791215,0.0001488605,0.0002626622,0.000006439097,0.00004786717],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006368807,0.0001530237,0.003609735,0.00006344983,0.00002761889,0.000001616105,0.00006788832,0.000004249563,0.9952471,0.0002290791,0.00002554131,0.0005070655],"study_design_scores_gemma":[0.000829527,0.0001272279,0.005084403,0.00001642557,0.00002854768,0.0001025249,0.0002038961,0.000004746,0.9925746,0.0004630006,0.0003857798,0.0001793073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972963,0.001842792,0.00001774099,0.00009187968,0.00003506432,0.0003668211,0.0001402618,0.000003377954,0.0002057188],"genre_scores_gemma":[0.9987557,0.0004739318,0.0001633805,0.0003178625,0.0000206594,0.00002412827,0.0002027043,0.0000148372,0.00002681078],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002672431,"threshold_uncertainty_score":0.5991404,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2115502449","doi":"10.1186/1475-2859-12-62","title":"Production of hydroxycinnamoyl anthranilates from glucose in Escherichia coli","year":2013,"lang":"en","type":"article","venue":"Microbial Cell Factories","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Lawrence Berkeley National Laboratory; Biological and Environmental Research; Office of Science; U.S. Department of Energy","keywords":"Biochemistry; Escherichia coli; Bioproduction; Metabolic engineering; Biology; Biosynthesis; Anthranilic acid; Yeast; Chemistry; Enzyme; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.005149299190158298,"gpt":0.1935505949398403,"spread":0.188401295749682,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003259441,0.0001757115,0.0001944778,0.00002366371,0.00002940963,0.00002032692,0.0001767193,0.0002257916,0.0001147319],"category_scores_gemma":[0.00007495312,0.000152151,0.00006175069,0.0001404416,0.0001773437,0.00001032077,0.0001005754,0.0001146668,0.00001678759],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001223119,"about_ca_system_score_gemma":0.0000407275,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005852632,"about_ca_topic_score_gemma":0.00004651392,"domain_scores_codex":[0.9990492,0.00002237059,0.0002708804,0.0003638788,0.00007822255,0.0002154141],"domain_scores_gemma":[0.9995269,0.00001064161,0.00009110267,0.0002056264,0.0001109899,0.00005477409],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006559858,0.0001550047,0.002844885,0.00005987042,0.00001174474,2.605446e-7,0.00007647301,0.000002771617,0.9933048,0.000001173716,0.00331151,0.0001658605],"study_design_scores_gemma":[0.0002724488,0.00007821539,0.001924325,0.00001998857,0.000007787587,4.262936e-7,0.00007828372,0.000003090076,0.9931978,0.0001563105,0.004067617,0.0001937102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974998,0.001643774,0.00002564124,0.0001508713,0.0002367378,0.0001932944,0.0000305344,0.00001302739,0.0002063584],"genre_scores_gemma":[0.9984113,0.0002583488,0.0004391913,0.00007960114,0.0002232894,0.0000127156,0.0002442583,0.00001634853,0.0003149349],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001385425,"threshold_uncertainty_score":0.620454,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2441570088","doi":"10.4315/0362-028x-69.7.1724","title":"Antimicrobial Activity of Vanillin against Spoilage Microorganisms in Stored Fresh-Cut Mangoes","year":2006,"lang":"en","type":"article","venue":"Journal of Food Protection","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta; Agriculture and Agri-Food Canada","funders":"","keywords":"Vanillin; Food spoilage; Antimicrobial; Food science; Preservative; Micrococcus; Penicillium; Bacteria; Aerobic bacteria; Yeast; Microorganism; Pseudomonas; Chemistry; Biology; Microbiology; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.00688189914897685,"gpt":0.2018929416958747,"spread":0.1950110425468978,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001732929,0.0001263639,0.0002024221,0.00007845375,0.0000269886,0.00001166333,0.0001411929,0.0002365632,0.000005000285],"category_scores_gemma":[0.00006226235,0.0001059598,0.0001231285,0.0001560984,0.00007033818,0.00001075052,0.000042486,0.0001732185,7.589709e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002874507,"about_ca_system_score_gemma":0.00005778933,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002753343,"about_ca_topic_score_gemma":0.00006763238,"domain_scores_codex":[0.9991612,0.00004091656,0.0003573002,0.0001609579,0.0001298091,0.0001498565],"domain_scores_gemma":[0.9993298,0.000005524285,0.0003669448,0.0001019547,0.0001584517,0.00003729031],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000443126,0.0002541855,0.0001632648,0.00007999377,0.00002275701,0.000002675108,0.000008034752,0.00003973876,0.9969237,0.000001475875,0.0004735594,0.001587462],"study_design_scores_gemma":[0.0006839956,0.0005417056,0.0007190604,0.00005741235,0.00001216463,0.00004139399,0.000009093234,0.000004918715,0.9968331,0.000143265,0.0008336391,0.0001202068],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981363,0.0004564325,0.00087936,0.0001721693,0.0001070112,0.0001341532,0.00001413387,0.000004142986,0.00009632457],"genre_scores_gemma":[0.9990702,0.00007206786,0.0003724526,0.00004243369,0.0003872361,0.000002351828,0.000009351898,0.00001255775,0.00003129447],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001467255,"threshold_uncertainty_score":0.4320915,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2117145500","doi":"10.1104/pp.104.050294","title":"Wound-Inducible Biosynthesis of Phytoalexin Hydroxycinnamic Acid Amides of Tyramine in Tryptophan and Tyrosine Decarboxylase Transgenic Tobacco Lines","year":2005,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal","funders":"","keywords":"Tryptamine; Hydroxycinnamic acid; Biochemistry; Aromatic L-amino acid decarboxylase; Biosynthesis; Nicotiana tabacum; Tryptophan; Tyramine; Chemistry; Phytoalexin; Biology; Enzyme; Amino acid; Gene; Antioxidant","retraction":null,"screen_n_in":null,"score":{"opus":0.009858657171208013,"gpt":0.2262099963260867,"spread":0.2163513391548787,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007994767,0.0002011485,0.00038927,0.00007238533,0.00001656591,0.000003143422,0.0001938956,0.0002685039,0.00001516658],"category_scores_gemma":[0.0001050946,0.000166671,0.00008029246,0.0001573367,0.0002633328,0.000006488903,0.00007800796,0.00009912402,0.000001483311],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007082219,"about_ca_system_score_gemma":0.00003478654,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004025788,"about_ca_topic_score_gemma":0.00009071828,"domain_scores_codex":[0.998842,0.00003456224,0.0003915074,0.0004022544,0.00007496553,0.0002547007],"domain_scores_gemma":[0.9994743,0.00005489759,0.0001302485,0.0002266146,0.00005188996,0.00006199618],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000432901,0.0002515049,0.0008376174,0.00015654,0.00003927714,4.959651e-7,0.00001983799,0.00001678329,0.9957091,0.00001851774,0.00008303406,0.002434377],"study_design_scores_gemma":[0.0005972967,0.0002430242,0.003154224,0.00005567045,0.00001968678,0.000008575525,0.00001979072,0.00008855061,0.9951259,0.0001551614,0.0003489053,0.0001831368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953004,0.004085534,0.0000143794,0.0002491624,0.0000282043,0.0001111893,0.0001495539,0.000008290413,0.00005331568],"genre_scores_gemma":[0.9979337,0.001071257,0.000436683,0.0001552108,0.0001547286,0.00001116081,0.0002011749,0.00001385811,0.00002216488],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003014277,"threshold_uncertainty_score":0.6796647,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2016530574","doi":"10.1371/journal.pone.0016262","title":"Structural Basis of Enzymatic Activity for the Ferulic Acid Decarboxylase (FADase) from Enterobacter sp. Px6-4","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Yunnan Provincial Science and Technology Department; National Natural Science Foundation of China; National Key Research and Development Program of China; McMaster University","keywords":"Decarboxylation; Ferulic acid; Substrate (aquarium); Chemistry; Biochemistry; Stereochemistry; Enzyme; Oxidative decarboxylation; Mutagenesis; Active site; Carboxy-lyases; Coumaric acid; Lyase; Site-directed mutagenesis; Catalysis; Mutation; Biology; Mutant","retraction":null,"screen_n_in":null,"score":{"opus":0.05489719729225204,"gpt":0.221175328056082,"spread":0.1662781307638299,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005737809,0.0001694666,0.0002140212,0.00001283125,0.00005135133,0.0000112633,0.0003170734,0.0001650848,0.0001109621],"category_scores_gemma":[0.0002060767,0.0001124172,0.0001271988,0.00005680273,0.0001400466,0.00000559868,0.0001324639,0.00009428403,0.000004316967],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000760615,"about_ca_system_score_gemma":0.00002495786,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006389307,"about_ca_topic_score_gemma":0.00001858612,"domain_scores_codex":[0.9991241,0.0000227481,0.0001907226,0.0003011732,0.000148751,0.0002124713],"domain_scores_gemma":[0.999262,0.00005052723,0.0001149972,0.0003604769,0.0001351192,0.00007682724],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003662379,0.0003683851,0.001821817,0.0001282173,0.0003198989,2.421125e-7,0.00004311768,3.549395e-8,0.9959457,0.000004729037,0.0001639706,0.0008376689],"study_design_scores_gemma":[0.000417708,0.0001643216,0.002883555,0.00004548698,0.0001884694,5.640504e-7,0.00001568884,0.00006781935,0.9956614,0.0003588586,0.00004423605,0.0001519285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981114,0.0008664689,0.0002696259,0.000156168,0.00003588557,0.0002581535,0.0001855639,0.00001174881,0.0001050279],"genre_scores_gemma":[0.9969943,0.00007557894,0.002281964,0.0002198174,0.0001821735,0.00005112232,0.0001023116,0.00001778277,0.00007498237],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002012338,"threshold_uncertainty_score":0.458424,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2027252172","doi":"10.1016/s0176-1617(00)80002-4","title":"Induced phenylpropanoid metabolism during suberization and lignification: a comparative analysis","year":2000,"lang":"en","type":"article","venue":"Journal of Plant Physiology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary; Western University","funders":"","keywords":"Phenylpropanoid; Metabolism; Biochemistry; Chemistry; Biology; Botany; Enzyme; Biosynthesis","retraction":null,"screen_n_in":null,"score":{"opus":0.01068232445641215,"gpt":0.2355969651369328,"spread":0.2249146406805206,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006176094,0.0001090798,0.000279939,0.00005682378,0.0000454038,0.00001103441,0.0001171311,0.0001232662,0.00005525239],"category_scores_gemma":[0.00001968839,0.00008101417,0.00009206883,0.0001881509,0.00006845508,0.000007569652,0.00002527475,0.0001063933,0.000002505144],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004199244,"about_ca_system_score_gemma":0.00002430272,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003138481,"about_ca_topic_score_gemma":0.000001574109,"domain_scores_codex":[0.9992976,0.00004619631,0.0002761113,0.000177875,0.00007983718,0.0001223368],"domain_scores_gemma":[0.9995278,0.00001208614,0.0001824766,0.00009547691,0.0001078285,0.00007433156],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004719948,0.00005932236,0.0001220046,0.00001459583,0.0002900273,0.000001183894,0.00004760174,0.0000228556,0.9986334,0.00001091238,0.0001228053,0.0002032313],"study_design_scores_gemma":[0.0003850933,0.0001177075,0.0268914,0.000006193843,0.0001794815,0.00005123199,0.00002891497,0.00003185925,0.9705992,0.00008987278,0.001509912,0.0001091305],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987835,0.0008721879,0.00003016664,0.00009862865,0.00002826623,0.00004286738,0.00002352357,0.000003165163,0.0001177207],"genre_scores_gemma":[0.9986983,0.0005321649,0.0001737421,0.00009572385,0.0003099174,0.000002167278,0.0001166347,0.000003578278,0.00006774907],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02803426,"threshold_uncertainty_score":0.3303662,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2005301559","doi":"10.1021/jf0608221","title":"Optimization of Extraction of Phenolic Compounds from Flax Shives by Pressurized Low-Polarity Water","year":2006,"lang":"en","type":"article","venue":"Journal of Agricultural and Food Chemistry","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Extraction (chemistry); Chemistry; Volumetric flow rate; Syringic acid; Chromatography; Ferulic acid; Vanillic acid; Vanillin; Phenolic acid; Analytical Chemistry (journal); Organic chemistry; Gallic acid; Thermodynamics; Antioxidant","retraction":null,"screen_n_in":null,"score":{"opus":0.003386070223875198,"gpt":0.1824387513574429,"spread":0.1790526811335678,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004364485,0.0001303934,0.0002269106,0.00000731008,0.00002658214,0.00001473399,0.0001249473,0.0002624981,0.0000199396],"category_scores_gemma":[0.00001998959,0.00007330413,0.0001069101,0.00004118391,0.0001034217,0.00001533211,0.00005090954,0.0001502354,8.851718e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005905601,"about_ca_system_score_gemma":0.00001167294,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001507862,"about_ca_topic_score_gemma":5.54674e-7,"domain_scores_codex":[0.9991933,0.00001186554,0.0003995927,0.0001390728,0.0001446618,0.0001115392],"domain_scores_gemma":[0.9993029,0.00001236083,0.0003226699,0.00006699189,0.0002381778,0.00005686516],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001247763,0.0001878424,0.0003392214,0.0001389625,0.00007914638,1.543007e-7,0.00001470549,0.00006629474,0.9974657,4.223359e-7,0.001549184,0.00003362495],"study_design_scores_gemma":[0.0006045034,0.0001353813,0.001274313,0.0000493121,0.00005754277,0.00002576327,0.00005489482,0.000007000162,0.9972988,0.00006700681,0.0003084859,0.0001169881],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963282,0.003006851,0.0001423997,0.0001194052,0.00002768562,0.00003232636,0.00007208885,0.000002757317,0.0002683102],"genre_scores_gemma":[0.9984294,0.0002187554,0.000559839,0.00001132964,0.0002906493,7.875198e-7,0.000358265,0.000004628624,0.0001263253],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002788095,"threshold_uncertainty_score":0.2989256,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2943829319","doi":"10.1111/tpj.14373","title":"Evolution of coumaroyl conjugate 3‐hydroxylases in land plants: lignin biosynthesis and defense","year":2019,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lignin; Conjugate; Biosynthesis; Chemistry; Biochemistry; Botany; Biology; Gene; Mathematics","retraction":null,"screen_n_in":null,"score":{"opus":0.006175340153695907,"gpt":0.1914647453980177,"spread":0.1852894052443218,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002206944,0.00009752051,0.0001385573,0.00003107924,0.00003439401,0.00001377638,0.0001392947,0.0001016037,0.00001222734],"category_scores_gemma":[0.00006647975,0.00005868423,0.00003772543,0.00004455414,0.00009283584,0.000003776846,0.00006046651,0.0001301052,0.000005322576],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008971402,"about_ca_system_score_gemma":0.00003774987,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002630631,"about_ca_topic_score_gemma":0.00001304658,"domain_scores_codex":[0.9993769,0.00004064005,0.0001941017,0.0001326577,0.00009938734,0.0001563266],"domain_scores_gemma":[0.9996597,0.00005538821,0.0001002684,0.0001034949,0.00002858204,0.00005263792],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002880764,0.00004061818,0.03694671,0.00003179704,0.00002635335,0.000003249762,0.00002176854,0.000007572912,0.9616995,0.00001820995,0.0007564149,0.0001597402],"study_design_scores_gemma":[0.0005504972,0.0001575164,0.003187691,0.0001091205,0.00001509208,0.0003992324,0.00009905614,0.00008998559,0.9936003,0.0004990422,0.001171831,0.0001206366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960823,0.003248883,0.00001027013,0.0001722046,0.00004834528,0.00006707978,0.00007547984,0.000002684105,0.0002927448],"genre_scores_gemma":[0.9985654,0.001149664,0.00003570953,0.00007616996,0.00008864471,0.000001185684,0.00001936102,0.000005845887,0.00005803739],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03375902,"threshold_uncertainty_score":0.2393073,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2044337623","doi":"10.1139/w07-113","title":"Properties of the reversible nonoxidative vanillate / 4-hydroxybenzoate decarboxylase from<i>Bacillus subtilis</i>","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"U.S. Department of Energy","keywords":"Bacillus subtilis; Escherichia coli; Biochemistry; Enzyme; Biology; Pyruvate decarboxylase; Gene; Carboxy-lyases; Molecular biology; Bacteria; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01186284765328354,"gpt":0.1741172701151308,"spread":0.1622544224618472,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001000124,0.0001586475,0.0002595182,0.00004937125,0.0001053091,0.000005451955,0.0005050441,0.0002482931,0.00005115122],"category_scores_gemma":[0.0002127346,0.0001018228,0.0001573065,0.0001284483,0.0007352004,0.000005826812,0.00007038415,0.0002033233,0.000005128717],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003389656,"about_ca_system_score_gemma":0.000936144,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00103025,"about_ca_topic_score_gemma":0.002264728,"domain_scores_codex":[0.9990315,0.00007035259,0.0003707265,0.0001999656,0.00004720963,0.0002802593],"domain_scores_gemma":[0.9989374,0.00001294541,0.0002859115,0.0002311398,0.000313752,0.000218843],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007735628,0.00001484611,0.001612595,0.00001528864,0.00007999207,0.00001055904,0.00009151981,0.000005271644,0.9901173,0.000002499055,0.00791144,0.00006130856],"study_design_scores_gemma":[0.0003761605,0.0001484985,0.0002175153,0.00005260063,0.00003144862,0.000317805,0.00004636371,7.092653e-7,0.9708574,0.00004528333,0.02777542,0.0001307506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924356,0.006482577,0.00001522577,0.0003760434,0.0002674625,0.00007691605,0.0001361283,0.000001565577,0.0002084985],"genre_scores_gemma":[0.9985871,0.0002057415,0.0001313012,0.0005853369,0.0001735649,9.25609e-7,0.0000243918,0.00001205094,0.0002796193],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01986397,"threshold_uncertainty_score":0.4152214,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2070169570","doi":"10.4141/a04-010","title":"Hydroxycinnamic acids and ferulic acid esterase in relation to biodegradation of complex plant cell walls","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Animal Science","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Ferulic acid; Hydroxycinnamic acid; Cell wall; Biodegradation; Chemistry; Lignin; Polysaccharide; Biochemistry; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01313277372929829,"gpt":0.2307547338695825,"spread":0.2176219601402842,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002072922,0.00006815354,0.00009154855,0.0001312634,0.00004286538,0.0000224124,0.0001984049,0.00005902136,0.000008273616],"category_scores_gemma":[0.00009008503,0.00005780706,0.00002084784,0.0002525341,0.0001882889,0.00001960142,0.00002440587,0.00007177902,0.000001262916],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004277653,"about_ca_system_score_gemma":0.0003549381,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002094602,"about_ca_topic_score_gemma":0.001015983,"domain_scores_codex":[0.9993265,0.000009194419,0.0002234164,0.0001471133,0.0001133599,0.0001804186],"domain_scores_gemma":[0.9994057,0.000004475158,0.00009215023,0.00006439102,0.0001044288,0.0003288451],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004417896,0.00001182675,0.00322856,0.000008761698,0.000001124438,0.00000198858,0.00005723264,0.000009976422,0.9955328,0.00001235117,0.0001393509,0.0009518478],"study_design_scores_gemma":[0.0001887278,0.0003376353,0.03987265,0.00002638516,0.000003302691,0.00003443128,0.00003010813,0.0001668193,0.9578365,0.00002233018,0.001400688,0.0000804006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984864,0.0004250623,0.00007152326,0.0007601011,0.00001793859,0.00004332617,0.00001661491,6.410751e-7,0.0001783661],"genre_scores_gemma":[0.9983309,0.00002404499,0.001311585,0.0002621906,0.00005225978,3.714816e-7,0.000007835615,0.000002874588,0.000007943306],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03769628,"threshold_uncertainty_score":0.2357303,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2063434932","doi":"10.1007/s00253-008-1708-7","title":"Survey of enzyme activity responsible for phenolic off-flavour production by Dekkera and Brettanomyces yeast","year":2008,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Curtin University of Technology; Australian Government; Alberta Water Research Institute","keywords":"Yeast; Ferulic acid; Enzyme; Chemistry; Caffeic acid; Phenols; p-Coumaric acid; Biochemistry; Food science; Phenolic acid; Hydroxycinnamic acid; Coumaric acid","retraction":null,"screen_n_in":null,"score":{"opus":0.01078279458528301,"gpt":0.2159136414549818,"spread":0.2051308468696988,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000187758,0.0001973248,0.0002901462,0.00005533318,0.0001175146,0.000003431268,0.0001494062,0.001162264,0.0000027387],"category_scores_gemma":[0.0001596887,0.0001695981,0.0000316805,0.0001379433,0.001173565,0.000003502311,0.0001705199,0.0002040494,0.000001153374],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005603335,"about_ca_system_score_gemma":0.00005905839,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002545953,"about_ca_topic_score_gemma":0.00003278651,"domain_scores_codex":[0.9988725,0.00003570143,0.0001986306,0.0005955675,0.00002301859,0.0002745386],"domain_scores_gemma":[0.9994937,0.00003893485,0.0001246073,0.0002188399,0.00007878802,0.00004514107],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008674847,0.00009269525,0.0004370043,0.00005479407,0.00005442488,3.811249e-7,0.00001110833,6.258647e-8,0.9895863,0.0000625985,0.004169595,0.004663579],"study_design_scores_gemma":[0.0004940429,0.0003347067,0.0007623527,0.000005519674,0.00001436867,0.0001695533,0.00001465333,0.000001160097,0.9894785,0.0001037345,0.008419856,0.0002015655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933503,0.004864998,0.0002551193,0.0009056089,0.00004489067,0.0002881872,0.0002393197,0.00002731846,0.00002422466],"genre_scores_gemma":[0.9970151,0.00175946,0.0005182583,0.0001708033,0.00004442793,0.00003416423,0.0003239598,0.0000138722,0.0001199772],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004462013,"threshold_uncertainty_score":0.8964447,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2770836247","doi":"10.1021/acssynbio.7b00412","title":"An Improved Whole-Cell Biosensor for the Discovery of Lignin-Transforming Enzymes in Functional Metagenomic Screens","year":2017,"lang":"en","type":"letter","venue":"ACS Synthetic Biology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Canada Foundation for Innovation; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Biosensor; Syringaldehyde; Lignin; Vanillin; Fosmid; Chemistry; High-throughput screening; Metagenomics; Biotechnology; Computational biology; Biology; Biochemistry; Gene; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01779429264056202,"gpt":0.2533488186558349,"spread":0.2355545260152729,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003108267,0.0004607641,0.0005725545,0.00007705958,0.0001401437,0.00004654446,0.001010391,0.001732543,0.000006301304],"category_scores_gemma":[0.0002039257,0.0003044371,0.0003343298,0.0000524435,0.0008351706,0.00001048383,0.0001603852,0.0006310212,0.00000412231],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001799971,"about_ca_system_score_gemma":0.0001756187,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008049804,"about_ca_topic_score_gemma":0.00002725362,"domain_scores_codex":[0.9978142,0.00008805764,0.0005278079,0.0008967902,0.0001020879,0.000571007],"domain_scores_gemma":[0.9982334,0.0002640277,0.0003758093,0.0009463743,0.0001311764,0.00004923448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001656171,0.00008537318,0.00005035641,0.0002124278,0.0001277992,0.000002074012,0.000008271936,8.235854e-7,0.9588506,0.00003315565,0.03954744,0.0009160962],"study_design_scores_gemma":[0.0004728533,0.0003678537,0.00001542503,0.00003571652,0.0001293059,0.00001420759,0.00002215332,0.00001375305,0.8004016,0.000293342,0.1978867,0.0003471516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5226815,0.06267472,0.008514758,0.3841383,0.003289498,0.006245187,0.01010096,0.0001140297,0.002241104],"genre_scores_gemma":[0.9696211,0.0004505086,0.0003576799,0.02323093,0.002206286,0.0001769959,0.002534917,0.00007109092,0.001350523],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4469396,"threshold_uncertainty_score":0.9999408,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2137401523","doi":"10.1110/ps.04953004","title":"Crystal structure of a dodecameric FMN‐dependent UbiX‐like decarboxylase (Pad1) from <i>Escherichia coli</i> O157: H7","year":2004,"lang":"en","type":"article","venue":"Protein Science","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Trimer; Chemistry; Cofactor; Stereochemistry; Escherichia coli; Biochemistry; Flavin group; Flavoprotein; Cysteine; Enzyme; Dimer; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.005420730598005232,"gpt":0.2213904330048017,"spread":0.2159697024067964,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001402354,0.0002479407,0.0002237475,0.00004307241,0.0001204117,0.00005249303,0.0008469793,0.0002001521,0.00003938735],"category_scores_gemma":[0.0002449547,0.0002022474,0.00008907449,0.0005588261,0.001033291,0.00001794449,0.0003939789,0.000185648,0.000006386709],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000369649,"about_ca_system_score_gemma":0.000439673,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002247042,"about_ca_topic_score_gemma":0.00002621447,"domain_scores_codex":[0.997887,0.0000205459,0.0003167805,0.0007832884,0.0005498328,0.0004425632],"domain_scores_gemma":[0.9988686,0.000009228305,0.00017189,0.0004795338,0.0002318021,0.0002388721],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001012537,0.0001009323,0.000116245,0.00003597428,0.00001275901,0.000002164806,0.0000360529,0.00002248863,0.9990943,0.00004453401,0.00004107489,0.0003922404],"study_design_scores_gemma":[0.0005718348,0.0002044465,0.0001784544,0.0000446058,0.00001318682,0.00000440104,0.00004031989,0.00001220877,0.9959583,0.00191982,0.0007682601,0.0002841769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960684,0.00113419,0.001761107,0.0001827478,0.00009283641,0.0003328478,0.0001174764,0.00002211955,0.0002883413],"genre_scores_gemma":[0.9919984,0.0000337808,0.007201172,0.0004715052,0.0001489638,0.00002101712,0.00004384039,0.00001624701,0.00006501509],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005440066,"threshold_uncertainty_score":0.8247411,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1977855155","doi":"10.1021/jo200567n","title":"Synthesis of Buprenorphine from Oripavine via N-Demethylation of Oripavine Quaternary Salts","year":2011,"lang":"en","type":"article","venue":"The Journal of Organic Chemistry","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Brock University","funders":"","keywords":"Demethylation; Reagent; Chemistry; Buprenorphine; Salt (chemistry); Combinatorial chemistry; Quaternary carbon; Sequence (biology); Stereochemistry; Medicinal chemistry; Organic chemistry; Enantioselective synthesis; Biochemistry; Catalysis; Receptor; Opioid","retraction":null,"screen_n_in":null,"score":{"opus":0.01102635541154341,"gpt":0.2084476569243339,"spread":0.1974213015127905,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003372369,0.0001760188,0.000330951,0.0000164669,0.00002347646,0.000002769861,0.0005790956,0.0002148692,0.0006106512],"category_scores_gemma":[0.0004375191,0.0001158409,0.0001406141,0.0001434071,0.0001874708,0.00000728921,0.0001575012,0.0001906129,0.000002048625],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001466999,"about_ca_system_score_gemma":0.00009081497,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000469115,"about_ca_topic_score_gemma":0.000002212369,"domain_scores_codex":[0.99873,0.00003622756,0.0006770256,0.0001495415,0.0002456709,0.0001615185],"domain_scores_gemma":[0.9983733,0.00007316955,0.0007925211,0.0003464897,0.0003185396,0.00009597637],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006005928,0.0002042892,0.001303635,0.0001177152,0.0001738946,0.000002140227,0.00006445895,8.284355e-7,0.9963063,3.541049e-7,0.0002718914,0.0009539265],"study_design_scores_gemma":[0.0003872219,0.0001521192,0.0008093585,0.0000878418,0.0001844766,0.00005615901,0.00006374765,0.000006494659,0.9976332,0.0003755673,0.0001162535,0.0001275279],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958515,0.002414662,0.001245788,0.0001121218,0.00006871876,0.00004106327,0.00003019258,0.000004037728,0.0002319333],"genre_scores_gemma":[0.9977742,0.0005872937,0.001092718,0.00002963011,0.0003946655,7.945488e-7,0.0000226605,0.00002089226,0.00007712792],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001922734,"threshold_uncertainty_score":0.6686202,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2170290892","doi":"10.1007/s00253-009-2026-4","title":"Bioproduction of lauryl lactone and 4-vinyl guaiacol as value-added chemicals in two-phase biotransformation systems","year":2009,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"Natural Resources Canada","keywords":"Bioproduction; Biotransformation; Guaiacol; Chemistry; Lactone; Organic chemistry; Thiocarbamates; Chromatography; Biochemistry; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.003891929378064405,"gpt":0.2450760958247809,"spread":0.2411841664467165,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001856614,0.0002362628,0.0003574424,0.0001309011,0.00004742782,0.0000089228,0.0001614262,0.0008884072,0.000004980224],"category_scores_gemma":[0.00005493612,0.0002023561,0.00003292428,0.0002495338,0.0005875984,0.000006430014,0.00008467976,0.0002444059,0.000003593273],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001121157,"about_ca_system_score_gemma":0.00002893397,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002457254,"about_ca_topic_score_gemma":0.000004457906,"domain_scores_codex":[0.9986581,0.00002457691,0.0004135609,0.0005571418,0.00003539672,0.0003111759],"domain_scores_gemma":[0.999512,0.00001491626,0.0001405854,0.0002292875,0.00004839491,0.00005478904],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003978805,0.0001998977,0.00003052376,0.00007523699,0.00002732119,9.880488e-7,0.00001944394,9.999844e-7,0.9902006,0.002931055,0.0001577325,0.005958281],"study_design_scores_gemma":[0.001863674,0.0004662914,0.00002996811,0.00002439171,0.00002296354,0.0001566925,0.00008863495,0.000009753572,0.9930272,0.0008953843,0.003178399,0.0002366888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940235,0.003578648,0.0001930943,0.001461294,0.00005100025,0.0003974541,0.00003658374,0.00003859784,0.0002198082],"genre_scores_gemma":[0.9976773,0.001208637,0.0003777751,0.0003227826,0.00006719057,0.00001898917,0.00029385,0.000009120164,0.00002440631],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005721592,"threshold_uncertainty_score":0.8251842,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1875966617","doi":"10.1111/j.1365-2672.2011.04990.x","title":"Isolation and characterization of a ferulic acid esterase (Fae1A) from the rumen fungus Anaeromyces mucronatus","year":2011,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"Genome Alberta","keywords":"Biochemistry; Ferulic acid; Esterase; Biology; Peptide sequence; Amino acid; Fatty acid; Gene; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.008043220297480074,"gpt":0.1880625825844323,"spread":0.1800193622869522,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001082289,0.0001198521,0.0001940192,0.0000233351,0.00003345279,0.000007728511,0.0001920205,0.0002105455,0.00002785338],"category_scores_gemma":[0.00002212066,0.00007707222,0.00005600449,0.00005626831,0.0001722985,0.000005464189,0.00009009067,0.0001239204,0.000001540926],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000547332,"about_ca_system_score_gemma":0.00003485771,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000666379,"about_ca_topic_score_gemma":0.000003130862,"domain_scores_codex":[0.9993155,0.00002395687,0.0003333507,0.0001637353,0.00003551595,0.0001279631],"domain_scores_gemma":[0.9993357,0.00001706352,0.000374415,0.0001216227,0.0001042833,0.00004689841],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005497868,0.00006088025,0.0008192676,0.00001348046,0.0000729841,6.901737e-7,0.000130483,5.419543e-8,0.9964992,0.00002193626,0.0001416034,0.001689616],"study_design_scores_gemma":[0.0004564633,0.0002247414,0.003842205,0.00001362881,0.0000406787,0.00003660554,0.0000577244,7.404902e-7,0.9928567,0.0002334326,0.002145783,0.00009123433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982389,0.00096706,0.0003330334,0.0001334082,0.0000761444,0.00007919908,0.00005261567,0.000002459134,0.0001172308],"genre_scores_gemma":[0.9978328,0.0003423094,0.001044608,0.0004267674,0.0001844089,0.000002237321,0.0001490549,0.000008255627,0.000009596228],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003642455,"threshold_uncertainty_score":0.3142914,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2128305572","doi":"10.1007/s00449-013-1060-x","title":"Effect of bioconversion conditions on vanillin production by Amycolatopsis sp. ATCC 39116 through an analysis of competing by-product formation","year":2013,"lang":"en","type":"article","venue":"Bioprocess and Biosystems Engineering","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"","keywords":"Vanillin; Vanillic acid; Ferulic acid; Chemistry; Bioconversion; Yield (engineering); Food science; Yeast extract; Guaiacol; Yeast; Fermentation; Biotransformation; Industrial and production engineering; Biochemistry; Chromatography; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.003439878579812698,"gpt":0.2130880720414688,"spread":0.2096481934616561,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001618456,0.0001993632,0.0003201698,0.00008032906,0.00005036177,0.00001986712,0.0001172586,0.0001520839,0.000007381238],"category_scores_gemma":[0.00008086402,0.0001550707,0.00008399864,0.0003953951,0.0000552802,0.00004022752,0.00003863431,0.00006417576,0.000001065797],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001238591,"about_ca_system_score_gemma":0.00000637138,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001160046,"about_ca_topic_score_gemma":0.000001637735,"domain_scores_codex":[0.9989443,0.00002443764,0.0003435083,0.0003702914,0.0001483098,0.0001691307],"domain_scores_gemma":[0.9993815,0.00001970061,0.0001895305,0.000194071,0.0001476632,0.00006756888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003012521,0.00005890078,0.001264175,0.001051294,0.0001296765,4.77204e-8,0.00003195448,0.00009183833,0.9966941,0.000006338884,0.0003480885,0.0002934619],"study_design_scores_gemma":[0.0002044129,0.000372709,0.0001903487,0.0001109274,0.0001471648,0.000002640647,0.00008252972,0.001825687,0.9965399,0.000001482797,0.0003358271,0.0001863509],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976161,0.001465301,0.0003490144,0.0000504212,0.00006659957,0.0003011827,0.0001127379,0.00002302252,0.00001565151],"genre_scores_gemma":[0.9987987,0.0001952087,0.00008591063,0.00001359174,0.00007896201,0.00003320719,0.0007640442,0.00001342275,0.00001700732],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001733849,"threshold_uncertainty_score":0.6323602,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2102856218","doi":"10.4141/cjss2012-039","title":"Artificially applied vanillic acid changed soil microbial communities in the rhizosphere of cucumber (<i>Cucumis sativus</i>L.)","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Soil Science","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"","keywords":"Cucumis; Rhizosphere; Vanillic acid; Agronomy; Biology; Soil bacteria; Chemistry; Botany; Horticulture; Bacteria; Food science","retraction":null,"screen_n_in":null,"score":{"opus":0.01565002013735273,"gpt":0.2224947676102954,"spread":0.2068447474729426,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008731863,0.0001227265,0.0001618864,0.0000708799,0.0001479022,0.00004247073,0.0008223003,0.0001110462,0.00003988958],"category_scores_gemma":[0.0001421877,0.00008618085,0.00005983116,0.0004062892,0.00106755,0.00001974921,0.00004969953,0.0002201355,0.000003239408],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003915703,"about_ca_system_score_gemma":0.0008551975,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003973234,"about_ca_topic_score_gemma":0.04044809,"domain_scores_codex":[0.9988608,0.00004067259,0.0003138617,0.0001090916,0.000219962,0.0004555718],"domain_scores_gemma":[0.9990615,0.0000211855,0.0001882711,0.0002191078,0.0001979661,0.0003119477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000262222,0.00004050328,0.00524747,0.00002077131,0.000007747431,0.000001405688,0.0009852903,0.000006272815,0.9910156,0.0001067076,0.00120419,0.001337798],"study_design_scores_gemma":[0.0002090471,0.00007535922,0.001854381,0.0000381942,0.00001148635,0.00004986198,0.001425661,0.000003565226,0.9902965,0.0001530918,0.005749251,0.000133618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952239,0.001893161,0.00002184586,0.0004230721,0.0001335523,0.00006120143,0.00001488461,0.000001102398,0.002227326],"genre_scores_gemma":[0.9987638,0.00006402858,0.0001444222,0.0007286227,0.0002540835,0.000002435062,0.000007062485,0.000007078656,0.00002848734],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03647486,"threshold_uncertainty_score":0.9770612,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2535496864","doi":"10.1021/acssuschemeng.6b02302","title":"Multicomponent Coupling Approach to Cross-Conjugated Polymers from Vanillin-Based Monomers","year":2016,"lang":"en","type":"article","venue":"ACS Sustainable Chemistry & Engineering","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Vanillin; Conjugated system; Polymer; Polymerization; Monomer; Furan; Pyrrole; Organic chemistry; Chemistry; Polymer chemistry; Materials science","retraction":null,"screen_n_in":null,"score":{"opus":0.004991700705990628,"gpt":0.2038384714173666,"spread":0.198846770711376,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001021984,0.0003870709,0.0002579257,0.0000339557,0.00008586353,0.00006693514,0.0004597818,0.0003414027,0.00004603648],"category_scores_gemma":[0.0003464958,0.0003182056,0.000119691,0.000202012,0.00009344475,0.0000123511,0.0002337562,0.0001484618,0.000009707296],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001248711,"about_ca_system_score_gemma":0.00009919899,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004470173,"about_ca_topic_score_gemma":6.977994e-8,"domain_scores_codex":[0.9979094,0.000004055121,0.0003291511,0.0007867002,0.000192842,0.0007778505],"domain_scores_gemma":[0.9988341,0.00004319215,0.00007142807,0.0004795589,0.0002056359,0.000366028],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001139888,0.00009321388,0.0003041039,0.0001991598,0.0000618073,0.000006040353,0.00001065755,0.007296677,0.991635,0.000009120425,0.0001445168,0.0001257269],"study_design_scores_gemma":[0.0008306988,0.00002718142,0.00008289742,0.0000461919,0.00001960095,0.000002437754,0.00008579539,0.001577939,0.9852191,0.00001133795,0.01156329,0.0005335368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9826191,0.0007554191,0.0155695,0.0002008224,0.00004903201,0.0001948007,0.00004354133,0.0001095558,0.0004581897],"genre_scores_gemma":[0.995756,0.00002380976,0.001874125,0.0001565611,0.0003208031,0.00007918257,0.000254445,0.00006697283,0.001468142],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01369538,"threshold_uncertainty_score":0.999927,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1667593033","doi":"10.1111/j.1742-4658.2012.08692.x","title":"Enzymatic synthesis of valerena‐4,7(11)‐diene by a unique sesquiterpene synthase from the valerian plant (<i>Valeriana</i> <i>officinalis</i>)","year":2012,"lang":"en","type":"article","venue":"FEBS Journal","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta; University of Calgary","funders":"Genome Alberta; Genome Canada; Rural Development Administration; Natural Sciences and Engineering Research Council of Canada; Government of Alberta; Ministère du Développement Économique, de l’Innovation et de l’Exportation; McGill University","keywords":"Valerian; Terpene; Sesquiterpene; Germacrene; Terpenoid; Biology; Medicinal plants; Traditional medicine; Botany; Chemistry; Biochemistry; Stereochemistry; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.00910273695887135,"gpt":0.2180639937767364,"spread":0.2089612568178651,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005106989,0.0003045341,0.0003513045,0.00002783333,0.000161592,0.00006180624,0.0006178425,0.0002701742,0.0002272604],"category_scores_gemma":[0.0005399087,0.000195743,0.0002291032,0.0001410988,0.0002132118,0.00001908054,0.0001824987,0.0002811953,0.00001254115],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002197978,"about_ca_system_score_gemma":0.00008827108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006514479,"about_ca_topic_score_gemma":0.00001014867,"domain_scores_codex":[0.9981326,0.0001789341,0.0005595048,0.0002827426,0.0003175199,0.0005287318],"domain_scores_gemma":[0.9985564,0.0001932322,0.0003734085,0.0004139054,0.0001301534,0.0003328805],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001836181,0.0002650665,0.002420142,0.00005341814,0.000138229,0.000003389996,0.00006251276,0.000001513173,0.9386573,0.00001344379,0.0573642,0.0008371221],"study_design_scores_gemma":[0.0003443205,0.0000989367,0.0004562752,0.0001619957,0.0001355545,0.0001799992,0.0001146682,0.000008324684,0.9593722,0.00008498072,0.03876685,0.0002758463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874721,0.009349952,0.0008170412,0.0008306207,0.0002766769,0.0001394341,0.0007592919,0.00001431197,0.0003405413],"genre_scores_gemma":[0.9962347,0.000758798,0.0006543425,0.0008586737,0.001118062,0.0000171218,0.0002098853,0.00003460417,0.0001138105],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02071491,"threshold_uncertainty_score":0.7982169,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2145220232","doi":"10.1002/btpr.1830","title":"Transformation of ferulic acid to vanillin using a fed‐batch solid–liquid two‐phase partitioning bioreactor","year":2013,"lang":"en","type":"article","venue":"Biotechnology Progress","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"","keywords":"Vanillin; Bioreactor; Ferulic acid; Chemistry; Chromatography; Product inhibition; Substrate (aquarium); Polymer; Chemical engineering; Organic chemistry; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.01565227788410323,"gpt":0.2985973885707504,"spread":0.2829451106866471,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009230553,0.0002252527,0.000251669,0.000102344,0.00008007132,0.00002517841,0.0003335786,0.0006066513,0.00003457483],"category_scores_gemma":[0.00008061213,0.0001964182,0.00009464574,0.0003274154,0.00034907,0.00001495008,0.0001471848,0.0001592086,0.00002690937],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001998801,"about_ca_system_score_gemma":0.00005030218,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002739528,"about_ca_topic_score_gemma":0.000004834327,"domain_scores_codex":[0.998624,0.00002279602,0.0003999969,0.0004180176,0.0001353545,0.0003998238],"domain_scores_gemma":[0.9992289,0.000005628319,0.0001432727,0.0003273698,0.0001850294,0.0001098332],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001908532,0.0002194879,0.00008920178,0.00006959628,0.00004027886,8.187407e-7,0.00003059589,0.000001770408,0.991661,0.0001019933,0.0001604687,0.007433938],"study_design_scores_gemma":[0.0007687345,0.0009357533,0.00001765141,0.00005250096,0.00002406104,0.00001845751,0.00006585092,0.0001658292,0.9949245,0.0001051649,0.002665552,0.0002559064],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9925193,0.0009240058,0.004082583,0.001748476,0.00006522187,0.0004911206,0.00003449083,0.00008024142,0.00005460999],"genre_scores_gemma":[0.9946698,0.00005866708,0.004662557,0.000247462,0.000101186,0.00009806242,0.0001240897,0.00002248827,0.00001567115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007178032,"threshold_uncertainty_score":0.8009703,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3139408004","doi":"10.1021/acssuschemeng.0c07406","title":"Comprehensive Insights into the Production of Long Chain Aliphatic Aldehydes Using a Copper-Radical Alcohol Oxidase as Biocatalyst","year":2021,"lang":"en","type":"article","venue":"ACS Sustainable Chemistry & Engineering","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Ministerio de Ciencia e Innovación; Association Nationale de la Recherche et de la Technologie; Agence Nationale de la Recherche","keywords":"Chemistry; Biocatalysis; Aldehyde; Organic chemistry; Isoeugenol; Alcohol; Context (archaeology); Biotransformation; Catalysis; Substrate (aquarium); Green chemistry; Benzaldehyde; Reaction mechanism; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.007659366068076779,"gpt":0.2291376561946809,"spread":0.2214782901266041,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009310436,0.0002970054,0.0002702121,0.0000259691,0.0001351242,0.0000415729,0.0003075632,0.0002664476,0.00001373957],"category_scores_gemma":[0.0008712697,0.00024698,0.0001233544,0.000437452,0.0002097319,0.00001612221,0.0003634692,0.0002230699,0.000001506509],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000699245,"about_ca_system_score_gemma":0.0002320573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005321379,"about_ca_topic_score_gemma":6.623139e-7,"domain_scores_codex":[0.9984211,0.00002176034,0.0003412835,0.0005515498,0.0002334494,0.000430898],"domain_scores_gemma":[0.9986856,0.00003840491,0.0001091736,0.0005179083,0.0005115669,0.0001373481],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003473613,0.00009655584,0.0000451129,0.001450396,0.0001329708,0.00005953319,0.0001409841,0.001214219,0.9964951,0.00003016172,0.0001961021,0.0001041035],"study_design_scores_gemma":[0.0002461864,0.00002671868,0.00001822706,0.0001177577,0.00006723915,0.0001429406,0.001016524,0.0002660489,0.9899328,0.00006749665,0.00779456,0.0003034538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871324,0.01180022,0.0002956391,0.0004113764,0.00006451296,0.0001701744,0.0000018518,0.00003126417,0.00009261135],"genre_scores_gemma":[0.9978884,0.0002711597,0.0003859251,0.0001067743,0.0003397889,0.00002890138,0.0001740741,0.00003685739,0.0007680514],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01152906,"threshold_uncertainty_score":0.9999983,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994257640","doi":"10.1007/s12010-013-0190-6","title":"Enzymatic Production of Ferulic Acid from Defatted Rice Bran by Using a Combination of Bacterial Enzymes","year":2013,"lang":"en","type":"article","venue":"Applied Biochemistry and Biotechnology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Bran; Ferulic acid; Food science; Enzyme; Corncob; Streptomyces; Esterase; Chemistry; Biochemistry; Biology; Raw material; Bacteria; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.005085054876201409,"gpt":0.19522366582347,"spread":0.1901386109472686,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006487437,0.0002301854,0.0003031511,0.00003903692,0.00004752887,0.00001167604,0.0002408422,0.0007996145,0.00003384663],"category_scores_gemma":[0.0001151205,0.0002065424,0.00005467605,0.0002058566,0.0005589527,0.000007021066,0.0001826039,0.0001481543,0.000002055096],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001093391,"about_ca_system_score_gemma":0.00004086136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006135939,"about_ca_topic_score_gemma":7.154712e-7,"domain_scores_codex":[0.9987418,0.00001461194,0.000395784,0.0005118551,0.0001156889,0.000220264],"domain_scores_gemma":[0.9992066,0.00001548877,0.000278983,0.0003284033,0.0001080562,0.00006244485],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001057691,0.0001850359,0.00006102274,0.0002192806,0.00006514238,9.188754e-8,0.00001128577,1.130184e-7,0.9957702,0.00003019278,0.001304405,0.002247473],"study_design_scores_gemma":[0.0005285687,0.00009761126,0.00004621216,0.00003151106,0.00004346077,0.000008698777,0.0001103578,0.00001422017,0.9981301,0.0005434361,0.0002180893,0.000227684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971989,0.001736896,0.0001934072,0.0004193446,0.00005393552,0.0002413383,0.00005615517,0.00002919004,0.00007083769],"genre_scores_gemma":[0.997748,0.0001769017,0.001264913,0.0000553405,0.00009322537,0.00002651056,0.000581314,0.00001550517,0.00003832009],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002359963,"threshold_uncertainty_score":0.8422556,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2784222099","doi":"10.1016/j.lwt.2018.01.022","title":"Assessment of interaction of vanillin with barley, pea and whey proteins: Binding properties and sensory characteristics","year":2018,"lang":"en","type":"article","venue":"LWT","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Canada Foundation for Innovation","keywords":"Vanillin; Whey protein isolate; Chemistry; Flavor; Food science; Whey protein; Fluorescence spectroscopy; Quenching (fluorescence); Biochemistry; Fluorescence","retraction":null,"screen_n_in":null,"score":{"opus":0.01787121745049892,"gpt":0.2473662477143591,"spread":0.2294950302638602,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003599749,0.00008780637,0.0001246998,0.00001718037,0.00002516277,0.000009132876,0.00004428863,0.00008071964,0.000004135889],"category_scores_gemma":[0.00004045281,0.00005991488,0.00001384994,0.00003364155,0.0002516622,0.000004845862,0.00006956398,0.00005263858,2.965648e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003483429,"about_ca_system_score_gemma":0.00001124138,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009678234,"about_ca_topic_score_gemma":0.0000036978,"domain_scores_codex":[0.9995075,0.0000130005,0.0001459192,0.000177193,0.00007108354,0.00008533481],"domain_scores_gemma":[0.9996378,0.000004275998,0.0001014044,0.00009290848,0.0001273605,0.00003622265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001000235,0.00004277498,0.005701884,0.000252645,0.00002510714,2.556333e-7,0.00003198511,4.867325e-8,0.9929892,0.00001051544,0.00003084471,0.0008146862],"study_design_scores_gemma":[0.0001962512,0.0004882305,0.003080769,0.0001187404,0.00001647308,0.00001089929,0.00008667616,0.00007637273,0.9953609,0.00000853287,0.0004665426,0.00008962915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991184,0.0002397469,0.0001821455,0.0000525612,0.00002046767,0.0001126627,0.00001476377,0.000007035238,0.0002521857],"genre_scores_gemma":[0.9979577,0.0001548258,0.001637312,0.00003360712,0.00009930565,0.000006492026,0.0000187852,0.000007590508,0.00008437457],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002621115,"threshold_uncertainty_score":0.2443258,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4389001051","doi":"10.1016/j.foodchem.2023.138071","title":"Mechanochemistry of Strecker degradation: Interaction of glyoxal with amino acids","year":2023,"lang":"en","type":"article","venue":"Food Chemistry","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Department of Chemistry, University of York; McGill University","keywords":"Strecker amino acid synthesis; Chemistry; Mechanochemistry; Glyoxal; Organic chemistry; Maillard reaction; Degradation (telecommunications); Trimer; Amino acid; Ball mill; Benzaldehyde; Chemical engineering; Biochemistry; Catalysis","retraction":null,"screen_n_in":null,"score":{"opus":0.01195989182425319,"gpt":0.2330528039686594,"spread":0.2210929121444062,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006502982,0.0001948238,0.0002102441,0.0000200329,0.00002618592,0.000007053772,0.0002532977,0.000277311,0.00006907217],"category_scores_gemma":[0.00009275257,0.0001667446,0.0001008047,0.0003005778,0.0001671696,0.000007115576,0.0001343958,0.0001292267,0.000003841716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001077229,"about_ca_system_score_gemma":0.00007735618,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002958876,"about_ca_topic_score_gemma":0.000001059408,"domain_scores_codex":[0.998881,0.000007500654,0.0003038364,0.0003637446,0.0002270498,0.0002168621],"domain_scores_gemma":[0.9991499,0.00001686404,0.0001997688,0.0003438342,0.0002037942,0.00008582916],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002234862,0.00008918226,0.0004346211,0.0005053115,0.00009591426,9.555094e-7,0.00001109247,0.000005799213,0.9971322,0.000006431311,0.001007074,0.0004879746],"study_design_scores_gemma":[0.000441737,0.0002334084,0.00005290158,0.00008326829,0.00003103831,0.00001769798,0.0002000223,0.00001620882,0.9973146,0.00007579468,0.001336613,0.0001967602],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972307,0.000222481,0.000136473,0.00007719277,0.00003369599,0.0000625211,0.00009161778,0.00003300238,0.002112321],"genre_scores_gemma":[0.99773,0.00006319529,0.0003552779,0.00001984622,0.0001570845,0.00001754949,0.0008030373,0.00002141829,0.0008325477],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001279774,"threshold_uncertainty_score":0.6799649,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2094172169","doi":"10.1107/s174430911003246x","title":"Structural analysis of<i>Bacillus pumilus</i>phenolic acid decarboxylase, a lipocalin-fold enzyme","year":2010,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Biotechnology Research Institute","funders":"Argonne National Laboratory; Basic Energy Sciences; National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Office of Science; University of Saskatchewan; Canadian Light Source; Eli Lilly and Company; U.S. Department of Energy","keywords":"Bacillus pumilus; Lipocalin; Chemistry; Enzyme; Biochemistry; Amino acid; Decarboxylation; Stereochemistry; Residue (chemistry); Protein structure; Biology; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.01011181447702975,"gpt":0.2589328735373965,"spread":0.2488210590603667,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001582623,0.0003129023,0.0003869226,0.0003333852,0.0004167034,0.00004481975,0.0006871191,0.0008799091,0.00008782432],"category_scores_gemma":[0.0002309551,0.0002716171,0.000249802,0.001358595,0.001220557,0.00002678205,0.0004388727,0.0005624338,1.129547e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008399716,"about_ca_system_score_gemma":0.00005333214,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007754244,"about_ca_topic_score_gemma":0.0007244236,"domain_scores_codex":[0.9983075,0.0001402968,0.0005550176,0.0005576668,0.0001318856,0.0003076677],"domain_scores_gemma":[0.9979927,0.00007918802,0.0003285875,0.001040996,0.0003860177,0.0001725094],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000741839,0.00003085725,0.01235081,0.00002224516,0.0006104576,1.111697e-7,0.00005345975,0.00001457242,0.9850079,0.001222478,0.0000705269,0.000542403],"study_design_scores_gemma":[0.003398009,0.001339478,0.1034113,0.00005295034,0.003739258,0.0001940845,0.0006003943,0.01214656,0.7248607,0.0146579,0.1325125,0.003086785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957747,0.001294198,0.00131816,0.0006607243,0.0001809028,0.0002210158,0.0002255882,0.0000592884,0.0002653789],"genre_scores_gemma":[0.993899,0.001029771,0.001493991,0.0003028017,0.0001397176,0.0000342169,0.00305367,0.00002008989,0.00002672046],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2601472,"threshold_uncertainty_score":0.9999736,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2152253501","doi":"10.1002/bit.10776","title":"Use of a plant‐derived enzyme template for the production of the green‐note volatile hexanal","year":2003,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"","keywords":"Hexanal; Chromatography; Bioreactor; Ultrafiltration (renal); Chemistry; Substrate (aquarium); Immobilized enzyme; Enzyme; Biochemistry; Organic chemistry; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.01412340542590656,"gpt":0.2061256243507028,"spread":0.1920022189247963,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007642193,0.0001026209,0.0001091636,0.0000233374,0.00005528394,0.000003664792,0.0001335969,0.0002840808,0.000001271604],"category_scores_gemma":[0.0002511252,0.00005879815,0.00005756319,0.0001245541,0.0002639729,0.000003323805,0.00006740996,0.00009687355,7.706686e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002733948,"about_ca_system_score_gemma":0.00001789349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001066835,"about_ca_topic_score_gemma":0.000006786123,"domain_scores_codex":[0.9994749,0.000008225403,0.0001555052,0.0001841984,0.00004622714,0.0001309592],"domain_scores_gemma":[0.9996226,0.00003005177,0.00007336524,0.0002154418,0.00004226551,0.00001625222],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004447252,0.00001665087,0.0001525932,0.00007841844,0.00004529477,6.088683e-8,0.000005961387,0.00002215936,0.9985848,0.000246262,0.0002158876,0.0005874315],"study_design_scores_gemma":[0.0001006415,0.00007661266,0.0001361062,0.0000256297,0.00002902576,0.00001885236,0.0000118356,0.0002175551,0.9835382,0.00006054548,0.01570643,0.00007853653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926121,0.00193622,0.003980988,0.001031964,0.0001407755,0.0002322633,0.00004746379,0.00001524025,0.000003026361],"genre_scores_gemma":[0.9983551,0.0002448777,0.001232556,0.00003181854,0.00003772897,0.000009833419,0.000008876051,0.000007430698,0.00007181297],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01549055,"threshold_uncertainty_score":0.2397719,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2019081499","doi":"10.1016/j.ibiod.2003.11.002","title":"Cinnamic acid inhibits the growth of the fungus Neurospora crassa, but is eliminated as acetophenone","year":2004,"lang":"en","type":"article","venue":"International Biodeterioration & Biodegradation","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Neurospora crassa; Acetophenone; Cinnamic acid; Ferulic acid; Mycelium; Incubation; Hypha; Growth inhibition; Fungus; Biology; Biochemistry; Chemistry; Botany; In vitro","retraction":null,"screen_n_in":null,"score":{"opus":0.007697525370184229,"gpt":0.2265566536115746,"spread":0.2188591282413904,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001300701,0.0002080004,0.0001236605,0.00004580024,0.0001352176,0.00006971312,0.0005748781,0.0002009572,0.00004676558],"category_scores_gemma":[0.0002446724,0.0001311607,0.0001354334,0.0002717924,0.0002447809,0.00002826094,0.000192632,0.0001478784,0.00002757328],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004332133,"about_ca_system_score_gemma":0.0001159592,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001090054,"about_ca_topic_score_gemma":0.00002015521,"domain_scores_codex":[0.998576,0.00004009666,0.0004124489,0.0003906748,0.0004099001,0.0001709136],"domain_scores_gemma":[0.9987866,0.000009542598,0.0003118124,0.0003243925,0.000519034,0.00004865189],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001330027,0.00008502402,0.000454687,0.00001442561,0.00003241601,3.133015e-7,0.00005160504,0.000007011619,0.9975011,0.0003251326,0.000558657,0.0008366684],"study_design_scores_gemma":[0.0005712726,0.0001364596,0.001626334,0.00003225876,0.00002196547,0.00001933923,0.00005036688,0.00007544152,0.9948035,0.001176128,0.00131934,0.0001676036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9873342,0.0002817995,0.001312121,0.009954128,0.0004010765,0.0002487649,0.0001484674,0.00002077943,0.0002986982],"genre_scores_gemma":[0.9962699,0.0001336252,0.0002264768,0.002266593,0.0001974036,0.00002325914,0.0004964074,0.00001582296,0.0003704419],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008935805,"threshold_uncertainty_score":0.5348576,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2089779297","doi":"10.1139/b10-072","title":"Total phenolics and individual phenolic acids vary with light environment in<i>Lindera benzoin</i>","year":2010,"lang":"en","type":"article","venue":"Botany","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"National Science Foundation","keywords":"Caffeic acid; Botany; Vanillic acid; Biology; Chlorogenic acid; Gallic acid; Ferulic acid; Phenolic acid; Coumaric acid; Benzoin; Understory; Food science; Horticulture; Chemistry; Canopy; Biochemistry; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.005706225256106029,"gpt":0.1933852893216606,"spread":0.1876790640655546,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006686494,0.0002112182,0.0001527652,0.00002224202,0.00005131716,0.00003223776,0.0001673627,0.0003886103,0.00003319579],"category_scores_gemma":[0.00002403937,0.0001647497,0.00003373272,0.00007068885,0.0001667904,0.000005994581,0.0002017304,0.0003684596,0.000008882191],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005680304,"about_ca_system_score_gemma":0.00003832435,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007007132,"about_ca_topic_score_gemma":0.0000204525,"domain_scores_codex":[0.9989019,0.00001147001,0.0001724429,0.0004464208,0.0001647417,0.0003030075],"domain_scores_gemma":[0.9995209,0.000008444968,0.00004881467,0.0002565078,0.00001845349,0.0001468619],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008852108,0.0001397255,0.004285574,0.00001708024,0.0000282652,0.000005008503,0.00004408928,5.399428e-7,0.9923944,0.00003880175,0.0003479875,0.002609972],"study_design_scores_gemma":[0.001020651,0.0002727327,0.01298563,0.00001457637,0.00002755317,0.00009065136,0.0000486903,0.00001004554,0.9634105,0.0003118893,0.02140797,0.0003991045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997121,0.001043811,0.00003701359,0.0006487807,0.00004147158,0.0001288322,0.00002343055,0.00001327355,0.0009424194],"genre_scores_gemma":[0.9975724,0.0001719492,0.001152522,0.0005879572,0.0002785184,0.00002274245,0.00003047584,0.00002253071,0.000160858],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02898392,"threshold_uncertainty_score":0.6718299,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2082014945","doi":"10.1007/s00253-007-0908-x","title":"Microencapsulated bacterial cells can be used to produce the enzyme feruloyl esterase: preparation and in-vitro analysis","year":2007,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"In vitro; Enzyme; Biochemistry; Esterase; Chemistry; Microbiology; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.005173826703566817,"gpt":0.2182201735653484,"spread":0.2130463468617816,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000283077,0.0002373666,0.0002931155,0.0001546158,0.00008113206,0.00001927262,0.0002286234,0.000851038,0.000004484681],"category_scores_gemma":[0.00003995723,0.0001730067,0.00004495431,0.0004869761,0.0004793844,0.000002412197,0.0002809804,0.0002352773,0.000001869841],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001360165,"about_ca_system_score_gemma":0.00002632828,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000266967,"about_ca_topic_score_gemma":0.0004352977,"domain_scores_codex":[0.9984792,0.00002855317,0.0003096306,0.0007322788,0.00003091851,0.0004194446],"domain_scores_gemma":[0.999451,0.00003487158,0.0000862114,0.0003202437,0.00003484498,0.00007283009],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008558268,0.00005385802,0.0001317697,0.00001410648,0.0001156385,0.000002010606,0.00006562124,0.00000124255,0.997646,0.00002736383,0.0002880999,0.0007984725],"study_design_scores_gemma":[0.0004513939,0.0001192235,0.0002307966,0.000002774501,0.00007677759,0.00003325731,0.00006247893,0.000001759384,0.9873559,0.00003417664,0.01140471,0.0002267856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954977,0.0004610901,0.0002398197,0.003242402,0.0000577699,0.0003907953,0.00005191854,0.0000426632,0.00001582572],"genre_scores_gemma":[0.9976414,0.00009212551,0.0005248166,0.001189184,0.00007629997,0.00002319915,0.0003956801,0.00001460354,0.00004272606],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01111661,"threshold_uncertainty_score":0.7055008,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2015077315","doi":"10.1263/jbb.102.124","title":"Isolation and characterization of Streptomyces sp. NL15-2K capable of degrading lignin-related aromatic compounds","year":2006,"lang":"en","type":"article","venue":"Journal of Bioscience and Bioengineering","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Vanillic acid; Ferulic acid; Protocatechuic acid; Lignin; Vanillin; Chemistry; Caffeic acid; Bacteria; 16S ribosomal RNA; Organic chemistry; Isolation (microbiology); Biochemistry; Coniferyl alcohol; Microbiology; Biology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.004187263851363691,"gpt":0.1919512196664911,"spread":0.1877639558151274,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001282508,0.00008118575,0.0001497786,0.00006904051,0.00002498005,0.00001456276,0.00007714824,0.00007812103,0.000001093269],"category_scores_gemma":[0.00002827636,0.00006240395,0.00003456238,0.0001612574,0.000122931,0.00002058596,0.00003029027,0.00004840707,4.471779e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004140696,"about_ca_system_score_gemma":0.00001850325,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000609204,"about_ca_topic_score_gemma":3.913148e-7,"domain_scores_codex":[0.9993548,0.000005978619,0.0003342539,0.0001022097,0.0001070156,0.0000957568],"domain_scores_gemma":[0.9995818,0.000009770612,0.0002504088,0.00004741556,0.00007002072,0.00004064562],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000009867418,0.000027895,0.005812562,0.00009106105,0.000009258441,3.31387e-7,0.00001659289,0.00001160907,0.993667,0.00001353781,0.00001111639,0.0003291386],"study_design_scores_gemma":[0.0001766528,0.0001841011,0.009957637,0.0001121628,0.00001620892,0.00003246746,0.00002901808,0.0009435372,0.9883575,0.00006604965,0.0000501618,0.00007445319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979311,0.001063933,0.0008414401,0.00005025808,0.00004732552,0.00003109293,0.000004334056,0.000002525998,0.00002794794],"genre_scores_gemma":[0.9985838,0.000268955,0.001062403,0.00000780024,0.00005007325,2.749117e-7,0.000009185332,0.000003857122,0.00001367624],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00530948,"threshold_uncertainty_score":0.2544759,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2890780539","doi":"10.1080/1028415x.2018.1521088","title":"Cocoa beans improve mitochondrial biogenesis via PPARγ/PGC1α dependent signalling pathway in MPP<sup>+</sup>intoxicated human neuroblastoma cells (SH-SY5Y)","year":2018,"lang":"en","type":"article","venue":"Nutritional Neuroscience","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"Science and Engineering Research Board; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"TFAM; FIS1; MFN2; Mitochondrial biogenesis; Tyrosine hydroxylase; Mitochondrion; Cell biology; COCOA BEAN; Biology; Peroxisome proliferator-activated receptor; SH-SY5Y; mitochondrial fusion; Biochemistry; Mitochondrial DNA; Receptor; Neuroblastoma; Cell culture; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.0124759846888343,"gpt":0.2375341526397946,"spread":0.2250581679509603,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001395986,0.0003545848,0.0002490001,0.0001150343,0.0002751599,0.00008693108,0.0007513359,0.0003145532,0.00004983801],"category_scores_gemma":[0.0001249472,0.0003398556,0.000154088,0.0005045061,0.0007795785,0.00002357672,0.0002974996,0.000253164,0.00003397842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003207299,"about_ca_system_score_gemma":0.00009590233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002655909,"about_ca_topic_score_gemma":0.00001621754,"domain_scores_codex":[0.997039,0.00008045459,0.0004922595,0.001241884,0.0005071949,0.0006391709],"domain_scores_gemma":[0.998979,0.00003991171,0.0001365864,0.0003407844,0.0002334775,0.0002702151],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001842501,0.000530945,0.00009614393,0.00004280593,0.000004264856,0.00001407165,0.00001147541,0.00004499963,0.9980202,0.00002031518,0.0008119622,0.0002185616],"study_design_scores_gemma":[0.0008907186,0.0007535878,0.00014407,0.00004175124,0.000008398894,0.00002413299,0.00001016354,0.0008115625,0.9921411,0.0003827201,0.004378651,0.0004131256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966003,0.0001613537,0.001714392,0.00037116,0.0003267648,0.0003622479,0.0002201072,0.000042844,0.0002008536],"genre_scores_gemma":[0.9964789,0.00006180129,0.0004956676,0.001536598,0.001023205,0.00006457398,0.0001315585,0.00003113953,0.0001765119],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005879087,"threshold_uncertainty_score":0.9999053,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4282976587","doi":"10.1038/s41589-022-01043-1","title":"Chemoproteomic identification of CO2-dependent lysine carboxylation in proteins","year":2022,"lang":"en","type":"article","venue":"Nature Chemical Biology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria; Simon Fraser University","funders":"Canadian Institutes of Health Research; Human Frontier Science Program; Michael Smith Health Research BC; Canada Research Chairs; Government of Canada","keywords":"Lysine; Carboxylation; Effector; Biochemistry; Chemistry; Biophysics; Biology; Amino acid; Computational biology","retraction":null,"screen_n_in":null,"score":{"opus":0.003978010637767352,"gpt":0.2395821547624735,"spread":0.2356041441247062,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002748398,0.0001764178,0.000241353,0.00007163194,0.00004198457,0.000005137189,0.0004142035,0.0005631177,0.00006147381],"category_scores_gemma":[0.0003230147,0.0001657731,0.00009400008,0.0002971779,0.0001567651,0.00000346273,0.0003691484,0.0006172644,0.000002451192],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006016615,"about_ca_system_score_gemma":0.00006865842,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001799465,"about_ca_topic_score_gemma":0.000002763412,"domain_scores_codex":[0.9984741,0.00006518875,0.0004692721,0.0005549237,0.0001743164,0.0002621615],"domain_scores_gemma":[0.9993019,0.00001979016,0.0002135148,0.0003063797,0.0001016061,0.00005685906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002636187,0.0002069597,0.00200225,0.00004351022,0.00001942702,7.595741e-7,0.00001125425,0.000009646555,0.9963769,0.0001357544,0.0002085931,0.0007212915],"study_design_scores_gemma":[0.0006075867,0.0001281374,0.0003554932,0.000005041806,0.00001001066,0.00001156536,0.00002107757,0.00003270477,0.9955944,0.001150354,0.001890941,0.0001926408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968561,0.001704908,0.0001024465,0.0005221547,0.0001132358,0.0003414468,0.00009505064,0.00001563152,0.0002490544],"genre_scores_gemma":[0.9979333,0.00004160753,0.000249535,0.0002626948,0.0001853191,0.0001531913,0.001062697,0.00001637401,0.00009528035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001682348,"threshold_uncertainty_score":0.6760032,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2025616721","doi":"10.1016/j.scitotenv.2013.08.040","title":"Canadian boreal pulp and paper feedstocks contain neuroactive substances that interact in vitro with GABA and dopaminergic systems in the brain","year":2013,"lang":"en","type":"article","venue":"The Science of The Total Environment","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Wilfrid Laurier University; Environment and Climate Change Canada; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glutamate decarboxylase; Dopaminergic; GABA transaminase; Pulp (tooth); Chemistry; Biochemistry; GABAA receptor; Biology; Pharmacology; Receptor; Dopamine; Enzyme; Medicine; Neuroscience","retraction":null,"screen_n_in":null,"score":{"opus":0.004333956317284352,"gpt":0.1779371560515062,"spread":0.1736031997342218,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002580208,0.0001019917,0.00008730012,0.0000192251,0.00007319989,0.00003926538,0.0003312662,0.00003750836,0.000002882146],"category_scores_gemma":[0.0000288694,0.00004326853,0.00001518569,0.00009901065,0.0009091788,0.00001596029,0.0001233192,0.0001093468,4.792688e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003273739,"about_ca_system_score_gemma":0.00003831771,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01491609,"about_ca_topic_score_gemma":0.001334156,"domain_scores_codex":[0.9992372,0.00005058517,0.00009956407,0.0002289406,0.0001712607,0.0002123877],"domain_scores_gemma":[0.9996426,0.00003395557,0.00005269458,0.0002029082,0.000007111645,0.00006072343],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004402134,0.00002066855,0.0004610216,0.000007240048,0.000003909542,6.425641e-7,0.0001723954,0.00005257134,0.9987176,0.00002048247,0.00003231641,0.0004671003],"study_design_scores_gemma":[0.0003636123,0.0001762476,0.1098989,0.00003494451,0.000009065091,0.00006009113,0.002279975,0.0003803747,0.8863129,0.0001758767,0.0001438823,0.0001641111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944961,0.0008784221,0.000001078929,0.003919376,0.00001637086,0.0002934789,0.000007538773,7.416987e-7,0.0003869085],"genre_scores_gemma":[0.9995707,0.00006682243,0.000009195172,0.0002252559,0.00001426682,0.00003114817,0.000002402618,0.000003680082,0.00007648811],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1124048,"threshold_uncertainty_score":0.9916437,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2973892830","doi":"10.1108/prt-02-2019-0009","title":"Bioactive composition and promising health benefits of natural food flavors and colorants: potential beyond their basic functions","year":2019,"lang":"en","type":"article","venue":"Pigment & Resin Technology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Nutraceutical; Flavor; Functional food; Health benefits; Aroma; Antimicrobial; Food science; Natural food; Food industry; Biotechnology; Chemistry; Biology; Traditional medicine; Medicine; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.004017217338162942,"gpt":0.20262242913213,"spread":0.198605211793967,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007144628,0.000154049,0.0002193448,0.00008982354,0.00007893478,0.00001134494,0.0001002376,0.0002477634,0.000004180075],"category_scores_gemma":[0.00001748481,0.0001274806,0.00003543895,0.0001519462,0.0002837809,0.000006665427,0.0001818712,0.0001467606,0.00000117258],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001665556,"about_ca_system_score_gemma":0.00003513494,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007704846,"about_ca_topic_score_gemma":0.000007244063,"domain_scores_codex":[0.9990844,0.0000201513,0.0002071832,0.0003911185,0.00007864875,0.0002185434],"domain_scores_gemma":[0.999562,0.00001029521,0.0001307591,0.000168735,0.00007667332,0.00005149506],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000177174,0.00009327733,0.0009286547,0.0001105369,0.00005968307,1.449154e-7,0.00001586423,0.000001274167,0.9866095,0.0001486709,0.00009959329,0.01175564],"study_design_scores_gemma":[0.0006771642,0.0009976412,0.001143507,0.00006848433,0.00001628119,0.00002710469,0.0001998993,0.00002545982,0.9958236,0.00057744,0.0002978788,0.0001455156],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9842924,0.0131125,0.0001124365,0.00194374,0.00007522991,0.0003214403,0.00006691845,0.00002846476,0.0000468176],"genre_scores_gemma":[0.9984501,0.0008083789,0.0003850908,0.0001635185,0.00003471437,0.00001319662,0.00009940921,0.00001152491,0.00003405946],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01415765,"threshold_uncertainty_score":0.5198507,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4382810948","doi":"10.1016/j.jbc.2023.105003","title":"Functional analysis of the protocatechuate branch of the β-ketoadipate pathway in Aspergillus niger","year":2023,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Génome Québec; Genome Canada","keywords":"Protocatechuic acid; Biochemistry; Gene; Biology; Aspergillus nidulans; Catabolism; Enzyme; Mutant","retraction":null,"screen_n_in":null,"score":{"opus":0.02220608861905887,"gpt":0.2403807584361386,"spread":0.2181746698170797,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003835814,0.000142167,0.0003340481,0.00003714201,0.00003339745,0.000005161833,0.0005516937,0.0003143638,0.0000636224],"category_scores_gemma":[0.0005125835,0.00006623688,0.0005279338,0.001107811,0.0003416141,0.000003006444,0.0002578693,0.000278072,8.823775e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001541871,"about_ca_system_score_gemma":0.00009765635,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003120164,"about_ca_topic_score_gemma":0.000001483574,"domain_scores_codex":[0.9986873,0.0000556274,0.0006057347,0.0002016875,0.0002585208,0.0001911878],"domain_scores_gemma":[0.9989323,0.00004464478,0.0004859929,0.0002689521,0.0002138627,0.00005423254],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001700504,0.0001087561,0.02570631,0.00005672423,0.0001937326,0.000001031184,0.000008011044,0.0001335913,0.9729338,0.000002604668,0.000380509,0.0003048796],"study_design_scores_gemma":[0.0002913627,0.00005939552,0.05058223,0.0000413848,0.00005209367,0.000009435453,0.00002420397,0.00002053471,0.94784,0.0002476495,0.0007446806,0.00008703499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987375,0.0003641253,0.00001772449,0.0004081765,0.00006468198,0.0001249653,0.00003449581,0.000003424199,0.0002449725],"genre_scores_gemma":[0.9993843,0.00009476856,0.00001567267,0.00009993214,0.0001161577,0.00001087127,0.00002127177,0.000005576911,0.0002514368],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02509381,"threshold_uncertainty_score":0.2701061,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1982454174","doi":"10.1007/s12155-014-9572-z","title":"Potential of Poplar Bark Phytochemicals as Value-Added Co-products from the Wood and Cellulosic Bioethanol Industry","year":2015,"lang":"en","type":"article","venue":"BioEnergy Research","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lakehead University","funders":"","keywords":"Bark (sound); Pulp and paper industry; Biorefinery; Biofuel; Cellulosic ethanol; Chemistry; Raw material; Suberin; Botany; Lignin; Biotechnology; Cellulose; Biology; Organic chemistry; Engineering","retraction":null,"screen_n_in":null,"score":{"opus":0.06075218315764153,"gpt":0.3444051805676839,"spread":0.2836529974100424,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006766677,0.0002352096,0.0002457579,0.0000502384,0.0001122379,0.00005375124,0.0006729824,0.0007599327,0.00004654188],"category_scores_gemma":[0.001140955,0.0001632538,0.00007584239,0.000391848,0.001103047,0.000007619924,0.0005862472,0.0005958464,0.00002707555],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001836839,"about_ca_system_score_gemma":0.0003342146,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005011816,"about_ca_topic_score_gemma":0.000004330475,"domain_scores_codex":[0.9975313,0.0002271497,0.0003089598,0.0007194455,0.0006866597,0.0005264702],"domain_scores_gemma":[0.9983073,0.00008102732,0.00008850748,0.0006370707,0.0005560829,0.0003299808],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003481838,0.0001508633,0.0003636674,0.00003273838,0.00007419401,0.000004348267,0.00003249387,0.000001399416,0.9762797,0.00007389707,0.02189626,0.0007421959],"study_design_scores_gemma":[0.000653435,0.0003457055,0.0001197299,0.0000334875,0.00001995076,0.00001294277,0.0003077303,0.00001079009,0.9808712,0.001039749,0.01637322,0.0002120731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897557,0.006498331,0.0000121014,0.002077566,0.00008421142,0.0001937446,0.00007891181,0.00001503879,0.001284414],"genre_scores_gemma":[0.9969527,0.0004268971,0.0002509255,0.0002992353,0.0009709469,0.00002869344,0.0003467335,0.00002919135,0.0006946605],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007197035,"threshold_uncertainty_score":0.6657299,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3202524745","doi":"10.1128/aem.01526-21","title":"Identification of Copper-Containing Oxidoreductases in the Secretomes of Three <i>Colletotrichum</i> Species with a Focus on Copper Radical Oxidases for the Biocatalytic Production of Fatty Aldehydes","year":2021,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Association Nationale de la Recherche et de la Technologie; CHIST-ERA; Agence Nationale de la Recherche","keywords":"Copper; Context (archaeology); Chemistry; Enzyme; Flavor; Organic chemistry; Biochemistry; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.007608874677556942,"gpt":0.1929256329675657,"spread":0.1853167582900087,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001270585,0.0001212133,0.0001907113,0.00002036319,0.00004495407,0.000004083592,0.0001344372,0.0001061138,0.000004121355],"category_scores_gemma":[0.0000406665,0.00006855745,0.00004775046,0.00008616156,0.0008624513,0.000002521165,0.0000613528,0.0000635235,2.477718e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000757867,"about_ca_system_score_gemma":0.00002172941,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006137762,"about_ca_topic_score_gemma":0.000009698974,"domain_scores_codex":[0.999257,0.00002243791,0.0002622813,0.0002811184,0.00005198017,0.000125209],"domain_scores_gemma":[0.9995286,0.0001010572,0.0001441937,0.0001971817,0.00001395873,0.00001496583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003980332,0.0002169935,0.001511643,0.00008093195,0.00005525032,2.601212e-7,0.00006133546,0.000008610959,0.996745,0.0001401721,0.0002269993,0.0005546913],"study_design_scores_gemma":[0.0004783359,0.000294327,0.0026008,0.00001913308,0.00004230413,0.00002763794,0.0009639203,0.000001584164,0.9949622,0.0001240413,0.000400187,0.00008557086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968205,0.00215713,0.00007960344,0.0004210004,0.00001996086,0.0003152751,0.000156254,0.000001575777,0.00002866646],"genre_scores_gemma":[0.9989051,0.0004539832,0.0001142965,0.0001011077,0.00004062528,0.0000509456,0.0003053941,0.000007325698,0.0000211947],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002084593,"threshold_uncertainty_score":0.3177738,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2989940347","doi":"10.1042/bcj20190527","title":"4-Coumarate:coenzyme A ligase isoform 3 from <i>Piper nigrum</i> (Pn4CL3) catalyzes the CoA thioester formation of 3,4-methylenedioxycinnamic and piperic acids","year":2019,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"Biochemical and biochemical processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Piperine; Ferulic acid; Biochemistry; Biosynthesis; Coumaric acid; Enzyme; Amino acid; Coenzyme A; Chemistry; Biology; Stereochemistry; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.004357380650350592,"gpt":0.2031315995536026,"spread":0.198774218903252,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002780666,0.0003266401,0.0003432888,0.00004892254,0.0001107943,0.00008714894,0.0005056363,0.0004146883,0.00006037939],"category_scores_gemma":[0.0001511192,0.0002074227,0.0002053481,0.0001859569,0.0003222286,0.00003506172,0.0003046121,0.0004258716,0.00002621626],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002696406,"about_ca_system_score_gemma":0.00009326119,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002414848,"about_ca_topic_score_gemma":0.000003020762,"domain_scores_codex":[0.9981774,0.00004540663,0.0005852794,0.0004251628,0.0003579483,0.0004087849],"domain_scores_gemma":[0.9987748,0.00005999763,0.0002985828,0.0004121515,0.0002339058,0.0002205418],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003231945,0.00008720751,0.00127185,0.0000684391,0.00005961389,0.000001600679,0.00008048623,7.37929e-7,0.9888922,0.000008945817,0.008381105,0.0008246165],"study_design_scores_gemma":[0.0009188776,0.0002339502,0.0004553859,0.00007973966,0.00005868742,0.0001740091,0.0002048594,0.00007255726,0.9917886,0.00038308,0.005325434,0.0003047813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.989651,0.008072319,0.0006255735,0.0009763883,0.0001703259,0.0002035997,0.0000776927,0.00001376588,0.0002093698],"genre_scores_gemma":[0.9961118,0.001284368,0.0005954966,0.001093231,0.0005289089,0.00001067253,0.0001986185,0.00002853473,0.0001483727],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006787951,"threshold_uncertainty_score":0.8458453,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}