{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":472,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":472,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"64cf43caa531","filters":{"topic":"Digestive system and related health"}},"results":[{"id":"W2061672417","doi":"10.1038/nrg2734","title":"How culture shaped the human genome: bringing genetics and the human sciences together","year":2010,"lang":"en","type":"review","venue":"Nature Reviews Genetics","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":873,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Acadia University","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Biology; Human genome; Human genetics; Genetics; Genome; Computational biology; Evolutionary biology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.03655785717901165,"gpt":0.3635113223264796,"spread":0.3269534651474679,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.002218846,0.0008055603,0.001627688,0.00008113652,0.001242898,0.0003746981,0.001462869,0.002174227,0.000009877806],"category_scores_gemma":[0.0001508352,0.0003602347,0.0007223994,0.000382181,0.001182228,0.000004131696,0.0004848568,0.002396875,0.0000117081],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002738743,"about_ca_system_score_gemma":0.0002217817,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003286983,"about_ca_topic_score_gemma":0.00003536419,"domain_scores_codex":[0.9962054,0.0009961828,0.0008502562,0.0009608013,0.0003843125,0.0006030829],"domain_scores_gemma":[0.9975061,0.00005761994,0.0009657128,0.001160446,0.0001530127,0.0001570847],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000004540545,0.00006362554,0.00005995556,0.0145497,0.0004991334,0.000007178611,0.0003749409,0.00000185286,0.00346615,0.003164534,0.0037563,0.9740521],"study_design_scores_gemma":[0.000276858,0.00009984596,0.00002020527,0.002202997,0.0007513857,0.0001320285,0.00002944194,0.000002247206,0.00002421606,0.00006816046,0.9959108,0.0004817626],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001556905,0.9935182,0.00002982998,0.0002546436,0.0004622932,0.002963128,0.00003497726,0.00001563853,0.0025656],"genre_scores_gemma":[0.000318915,0.9929206,0.0003613747,0.0005058011,0.00168052,0.0001496609,0.0001577142,0.00009627595,0.003809078],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9921545,"threshold_uncertainty_score":0.9999046,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1968571694","doi":"10.1038/nature10763","title":"The contribution of bone to whole-organism physiology","year":2012,"lang":"en","type":"review","venue":"Nature","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":537,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institutes of Health; Canadian Diabetes Association","keywords":"Organism; Physiology; Model organism; Biology; Organ system; Pancreas; Neuroscience; Disease; Pathology; Medicine; Genetics; Gene; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.01031725026961406,"gpt":0.3161688661516083,"spread":0.3058516158819942,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003312182,0.0002092831,0.0006374653,0.00003419325,0.00009450784,0.000006187442,0.0002101564,0.003555962,0.000004163286],"category_scores_gemma":[0.000126219,0.0001160841,0.0002377112,0.000127815,0.00005408794,8.990961e-7,0.0001050221,0.001079049,0.00006933974],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002587088,"about_ca_system_score_gemma":0.0002007843,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002200615,"about_ca_topic_score_gemma":0.000005672293,"domain_scores_codex":[0.9988422,0.0001885049,0.0003363195,0.0002430745,0.0001031541,0.0002867731],"domain_scores_gemma":[0.9990394,0.00003491728,0.0002912082,0.0003797144,0.0001650441,0.00008971305],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008329935,0.0001535857,0.00001062287,0.007761863,0.0008788698,0.000003642356,0.00004613551,8.42774e-7,0.02427612,0.00740551,0.0400606,0.9193189],"study_design_scores_gemma":[0.00008730002,0.00009381035,0.00003951241,0.0008352564,0.0001512478,0.00002427609,0.000004102737,2.004314e-8,0.0003339624,0.0000143972,0.9982921,0.0001239841],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00005521384,0.997763,0.00001236645,0.0001424899,0.0008885852,0.0005666329,0.00007744578,0.000006033691,0.0004881807],"genre_scores_gemma":[0.005055789,0.9922098,0.0000143637,0.0001633132,0.0006838149,0.0000305706,0.000597253,0.00002739658,0.001217723],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9582315,"threshold_uncertainty_score":0.9977376,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2080598921","doi":"10.1016/j.cell.2014.04.051","title":"Gut Microbial Metabolism Drives Transformation of Msh2-Deficient Colon Epithelial Cells","year":2014,"lang":"en","type":"article","venue":"Cell","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":469,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; St. Michael's Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; Cancer Research Society","keywords":"Biology; Transformation (genetics); Cell biology; Metabolism; Microbial metabolism; Epithelium; Microbiology; Genetics; Bacteria; Biochemistry; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.004384706768871341,"gpt":0.2125117959492086,"spread":0.2081270891803373,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002042204,0.00009565564,0.0001463978,0.00003384108,0.00005063646,0.000006503114,0.00009696203,0.000160235,0.00001209448],"category_scores_gemma":[0.000006683839,0.00008066703,0.00008236145,0.00004476689,0.00005663857,0.000002353071,0.00001731832,0.00005845672,0.00004265935],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005719796,"about_ca_system_score_gemma":0.00004690141,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000016608,"about_ca_topic_score_gemma":0.000004555664,"domain_scores_codex":[0.9992841,0.00008366145,0.0002347348,0.0001562695,0.00007839914,0.0001627814],"domain_scores_gemma":[0.9996159,0.000007289423,0.0001072781,0.000149652,0.00006567307,0.00005417725],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003511612,0.00006415868,0.00001153073,0.00008306841,0.000008897256,1.408864e-7,0.0003131214,0.0001453792,0.9981114,0.0002307249,0.0005563588,0.0004401243],"study_design_scores_gemma":[0.0006159006,0.0001563702,0.0004207841,0.00001130474,0.00001974357,0.000001999893,0.00005322663,0.00003982814,0.8838026,0.00001836437,0.1147732,0.00008670608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9776639,0.0003889501,0.003772314,0.00006061545,0.0005590312,0.0002090511,0.00003750237,0.000007985426,0.01730063],"genre_scores_gemma":[0.9984517,0.0001590361,0.0002025111,0.00008421911,0.0001426917,0.000003932324,0.00006128859,0.00001112947,0.0008835093],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1143088,"threshold_uncertainty_score":0.3289506,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2118078855","doi":"10.1016/j.ajhg.2007.09.012","title":"Independent Introduction of Two Lactase-Persistence Alleles into Human Populations Reflects Different History of Adaptation to Milk Culture","year":2008,"lang":"en","type":"article","venue":"The American Journal of Human Genetics","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":343,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Academy of Finland","keywords":"Genetics; Allele; Biology; Haplotype; Population; Allele frequency; Gene; Demography","retraction":null,"screen_n_in":null,"score":{"opus":0.04612815627210086,"gpt":0.3114320814021329,"spread":0.265303925130032,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001812303,0.0001130298,0.000263326,0.00009456584,0.0001066018,0.000002530373,0.0002184041,0.00003959993,0.00000588629],"category_scores_gemma":[0.00002418644,0.00007915386,0.0001090191,0.00008688755,0.0002875782,0.000003655286,0.00003596479,0.0001311682,5.805057e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001112717,"about_ca_system_score_gemma":0.00011969,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008802694,"about_ca_topic_score_gemma":0.0001204942,"domain_scores_codex":[0.9988378,0.0001834819,0.0004829083,0.0001282473,0.000249924,0.0001176624],"domain_scores_gemma":[0.9984754,0.000005188973,0.0008573494,0.0002361529,0.0003440215,0.00008187046],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001169801,0.0001370871,0.00393428,0.00002500373,0.0001084897,0.00000223885,0.006886977,0.003972637,0.9806831,0.0001387075,0.003252321,0.0007421451],"study_design_scores_gemma":[0.004734141,0.04344544,0.3957753,0.0004919533,0.0009236272,0.001008018,0.02378745,0.0001926388,0.5034413,0.001486012,0.02335609,0.001358059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968161,0.001824798,0.000803822,0.000153623,0.0001685543,0.0001122114,0.000003135514,0.000002145126,0.0001156107],"genre_scores_gemma":[0.9975646,0.0003022337,0.001347021,0.00006191112,0.0003261534,0.000001709912,0.00001965458,0.00001321334,0.000363485],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4772418,"threshold_uncertainty_score":0.32278,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1990442683","doi":"10.1073/pnas.0505690102","title":"Direct regulation of intestinal fate by Notch","year":2005,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":294,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Vanderbilt University; Toray Industries; National Institutes of Health; University of Toronto; Howard Hughes Medical Institute","keywords":"Notch signaling pathway; Cell biology; Progenitor cell; Biology; Cell fate determination; Embryonic stem cell; Morphogenesis; Progenitor; Notch proteins; Stem cell; Signal transduction; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02177303722589772,"gpt":0.3010522499012959,"spread":0.2792792126753981,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006924037,0.00005009782,0.00008346187,0.00004364803,0.00006256446,0.000003741822,0.0002653477,0.0000744812,0.000004103273],"category_scores_gemma":[0.0002269906,0.00003254485,0.00004062218,0.0002152606,0.000362128,0.00001396399,0.00005158966,0.00004747777,5.459522e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009319496,"about_ca_system_score_gemma":0.0000286555,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003953821,"about_ca_topic_score_gemma":5.130977e-8,"domain_scores_codex":[0.9991663,0.000005468506,0.0002314884,0.0001349123,0.0003827641,0.0000790727],"domain_scores_gemma":[0.999388,0.00001676973,0.000337464,0.000005344473,0.0002335267,0.00001886562],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001136147,0.00002368446,0.004228314,0.00003237613,0.000006975303,1.8629e-10,0.0000297965,0.00009681616,0.9905164,0.002615916,0.002071065,0.0003672478],"study_design_scores_gemma":[0.00009314749,0.00006639996,0.03140328,0.00007061743,0.000004488195,0.000003209734,0.00002820548,0.0001860525,0.965745,0.0007559918,0.001606109,0.0000375438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9730021,0.0003377064,0.000003564913,0.001467093,0.00001163216,0.00009972483,0.00001141785,0.000002683924,0.02506406],"genre_scores_gemma":[0.9985772,0.00003970427,0.0006747165,0.00007821219,0.00006139691,0.000002176248,5.162579e-7,0.000002147348,0.0005639333],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02717497,"threshold_uncertainty_score":0.1334276,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2129963828","doi":"10.1093/ajcn/71.3.674","title":"Consumption of fermented and nonfermented dairy products: effects on cholesterol concentrations and metabolism","year":2000,"lang":"en","type":"review","venue":"American Journal of Clinical Nutrition","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":286,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ste. Anne's Hospital; McGill University","funders":"","keywords":"Fermentation; Cholesterol; Metabolism; Chemistry; Food science; Bacteria; Bile acid; Microbial metabolism; Biochemistry; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.03944605995691146,"gpt":0.3981041111868463,"spread":0.3586580512299348,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005502655,0.0002172123,0.001458252,0.0001109074,0.00004192795,0.0000145883,0.00008451391,0.0002299554,0.000002416542],"category_scores_gemma":[0.0002008315,0.0001616393,0.0002316689,0.0001125641,0.0003990528,0.000008050743,0.00001932016,0.0003524108,0.000001757208],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001151007,"about_ca_system_score_gemma":0.000184859,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002593964,"about_ca_topic_score_gemma":4.405039e-7,"domain_scores_codex":[0.9971954,0.0008150561,0.001403805,0.0002838274,0.0001591697,0.0001427742],"domain_scores_gemma":[0.9976318,0.0001782858,0.001683967,0.0001627442,0.0001784173,0.0001648063],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003452642,0.0005429244,0.00023049,0.006881125,0.0003645681,0.000006752629,0.00001462231,2.603085e-7,0.0001853343,0.00001868013,0.0002884196,0.9911215],"study_design_scores_gemma":[0.004337128,0.005919553,0.004310162,0.0199654,0.001602246,0.0003785995,0.00003548985,0.000001295754,0.000299501,0.00001607855,0.9628198,0.0003147557],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.08184189,0.9168863,0.00002688576,0.0001376705,0.0002848937,0.000728015,0.00004910654,0.000003385476,0.00004186913],"genre_scores_gemma":[0.03944336,0.9595854,0.000198231,0.0001125992,0.0005043459,0.00001412956,0.0001031129,0.00001948486,0.00001939279],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9908068,"threshold_uncertainty_score":0.659146,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2084589442","doi":"10.1111/j.1572-0241.2002.05664.x","title":"Using breath tests wisely in a gastroenterology practice: an evidence-based review of indications and pitfalls in interpretation","year":2002,"lang":"en","type":"review","venue":"The American Journal of Gastroenterology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":285,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal Alexandra Hospital; University of Alberta; University of Calgary","funders":"","keywords":"Medicine; Breath test; Bloating; Small intestinal bacterial overgrowth; Irritable bowel syndrome; Gastroenterology; Lactose intolerance; Malabsorption; Internal medicine; Hydrogen breath test; Intensive care medicine; Diarrhea; Helicobacter pylori; Lactose","retraction":null,"screen_n_in":null,"score":{"opus":0.04712287070010903,"gpt":0.3850582988613529,"spread":0.3379354281612439,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001870682,0.0002832588,0.001799473,0.0003457435,0.00002659994,0.000008297173,0.0004360771,0.0001260109,0.000004392182],"category_scores_gemma":[0.0005883984,0.0001953172,0.0002157948,0.0002805905,0.0005132303,0.00002609111,0.00007581856,0.0005595288,7.08303e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000918908,"about_ca_system_score_gemma":0.0002892232,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007020302,"about_ca_topic_score_gemma":0.00007427656,"domain_scores_codex":[0.9941912,0.003509335,0.001503007,0.0002967437,0.0001642865,0.0003353739],"domain_scores_gemma":[0.9952034,0.0002268886,0.003868866,0.0003486548,0.0002392591,0.0001129212],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"systematic_review","study_design_scores_codex":[0.0205408,0.003541933,0.1153267,0.06706648,0.002629338,0.0004726542,0.00125187,0.0006639565,0.0005835965,0.00003846776,0.0003763452,0.7875079],"study_design_scores_gemma":[0.006242765,0.1481652,0.03222831,0.7304464,0.007022101,0.03608689,0.001109581,0.0004275615,0.000009791441,0.00003813732,0.0371678,0.001055486],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.05374051,0.9444634,0.0005735738,0.0006169858,0.000080023,0.0005018986,0.00001329855,0.000001609338,0.000008652261],"genre_scores_gemma":[0.08240934,0.9153841,0.0009278176,0.001155704,0.00006428291,0.00001669917,0.00001441374,0.00002611245,0.000001483588],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7864524,"threshold_uncertainty_score":0.7964807,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1591006241","doi":"10.3748/wjg.v12.i11.1657","title":"Intestinal sugar transport","year":2006,"lang":"en","type":"review","venue":"World Journal of Gastroenterology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":275,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Monosaccharide; Disaccharidase; Enterocyte; Lactose; Biochemistry; Sucrase; Chemistry; Sucrose; Brush border; Sugar; Fructose; Galactose; Glucose transporter; Lactase; Maltose; Carbohydrate; Small intestine; Biology; Enzyme; Insulin; Vesicle; Membrane; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.01820246060811103,"gpt":0.2990781318835382,"spread":0.2808756712754271,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005030578,0.0003741466,0.001556234,0.0003952369,0.00004406009,0.00000815234,0.000428846,0.0002883253,0.00002805623],"category_scores_gemma":[0.00002233491,0.00027589,0.0008268149,0.0001306082,0.0001344878,0.000003009886,0.00004516555,0.0006494664,0.00001471065],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005022484,"about_ca_system_score_gemma":0.000332175,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006495099,"about_ca_topic_score_gemma":0.0001465093,"domain_scores_codex":[0.9974386,0.000344572,0.001339236,0.0002772501,0.0001644632,0.0004358492],"domain_scores_gemma":[0.998031,0.00002137848,0.001359434,0.0002428189,0.0001762928,0.000169033],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003455946,0.001946088,0.04421987,0.03310633,0.00600102,0.003660254,0.00006325835,0.0001443519,0.0002002816,0.0003424704,0.1577485,0.7491117],"study_design_scores_gemma":[0.0004904413,0.001799765,0.0002435441,0.003340575,0.0005085713,0.004658027,0.000002826465,1.150603e-7,0.000002055779,0.00000630789,0.9888231,0.0001246732],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0003346003,0.9963955,0.0006678578,0.00006018579,0.000934091,0.0002021181,0.0000229106,0.000004959854,0.001377728],"genre_scores_gemma":[0.0009060936,0.9951053,0.000416464,0.0001187946,0.001172806,0.000006332889,0.000130707,0.00005750905,0.002085971],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8310746,"threshold_uncertainty_score":0.9999693,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2905549946","doi":"10.3390/nu10121994","title":"Lactose Intolerance, Dairy Avoidance, and Treatment Options","year":2018,"lang":"en","type":"review","venue":"Nutrients","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":244,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Lactose intolerance; Lactose; Lactase; Medicine; Food intolerance; Food science; Biotechnology; Intensive care medicine; Biology; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.03537550671229939,"gpt":0.3372774983865221,"spread":0.3019019916742227,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001011326,0.0003376208,0.0006714728,0.00008236263,0.0001365635,0.00002441362,0.0001323272,0.0005188785,0.000009291585],"category_scores_gemma":[0.00001715874,0.0002418497,0.0002008898,0.0001247557,0.0001105132,0.00000245365,0.00007385176,0.0001136556,0.000129863],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006238614,"about_ca_system_score_gemma":0.0002150591,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009267598,"about_ca_topic_score_gemma":0.000006057945,"domain_scores_codex":[0.9986243,0.0001279894,0.0003523122,0.0005289796,0.0000944491,0.0002719983],"domain_scores_gemma":[0.9991711,0.00001221239,0.0002056988,0.0003906443,0.00006212334,0.0001582667],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003639814,0.0005768096,0.0002612157,0.007206358,0.0007537262,0.00001621628,0.00009558912,2.49668e-7,0.0000173815,0.0002438453,0.01567861,0.9751136],"study_design_scores_gemma":[0.0004643453,0.0004087976,0.00003155272,0.002944833,0.0001789424,0.0000340545,0.000005734964,3.291765e-7,0.00001421925,0.000008603486,0.9956806,0.0002279458],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004404853,0.9941052,0.00002198266,0.000007942873,0.0005130084,0.0007284252,0.0001263907,0.00001613034,0.004040484],"genre_scores_gemma":[0.0001467205,0.9928461,0.00009953045,0.00002804266,0.0005664882,0.0001396943,0.0005257411,0.00004267446,0.005604976],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.980002,"threshold_uncertainty_score":0.9862344,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2075122875","doi":"10.1074/jbc.m109.078980","title":"Structural Basis for Substrate Selectivity in Human Maltase-Glucoamylase and Sucrase-Isomaltase N-terminal Domains","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":239,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University; University of Waterloo; University of Toronto; Ontario Institute for Cancer Research","funders":"Division of Materials Research; National Center for Research Resources; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Teva Pharmaceutical Industries; Heart and Stroke Foundation of Canada; National Institutes of Health; National Science Foundation","keywords":"Oligosaccharide; Chemistry; Hydrolase; Enzyme; Hydrolysis; Stereochemistry; Biochemistry; Active site; Substrate (aquarium); Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.01572211879389807,"gpt":0.2887198256595704,"spread":0.2729977068656723,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005370376,0.0001889661,0.0003102473,0.00003346545,0.0001096517,0.00002422098,0.0001649614,0.0004520974,0.00003316332],"category_scores_gemma":[0.0002720223,0.0001335812,0.0001312783,0.00006957113,0.0001878634,0.000007856818,0.0000448596,0.0004491795,3.585814e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002057887,"about_ca_system_score_gemma":0.0001237598,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009651958,"about_ca_topic_score_gemma":0.00002558047,"domain_scores_codex":[0.9988014,0.00005701908,0.0004668214,0.0002720965,0.00009426616,0.0003084268],"domain_scores_gemma":[0.9991319,0.00006115604,0.0003172406,0.0001340514,0.0001303954,0.0002252364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000288459,0.00007915654,0.05064368,0.00007743113,0.00002727011,0.00007032197,0.00001128811,0.000004348783,0.9483027,0.00002384796,0.00008481692,0.0003866173],"study_design_scores_gemma":[0.001973676,0.0009322939,0.1110761,0.00005672612,0.00002652264,0.001534035,0.00008177576,0.0000262748,0.8826949,0.0002939008,0.001014774,0.0002889817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999057,0.0002837697,0.00003005683,0.00008830075,0.0001065233,0.0001382902,0.00007081915,0.000004673675,0.0002205936],"genre_scores_gemma":[0.9989108,0.00006668111,0.0003889114,0.00005525533,0.0004487725,0.000006823033,0.0000483576,0.00001080844,0.0000635817],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06560786,"threshold_uncertainty_score":0.5447284,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2165494765","doi":"10.1086/421050","title":"The T Allele of a Single-Nucleotide Polymorphism 13.9 kb Upstream of the Lactase Gene (LCT) (C−13.9kbT) Does Not Predict or Cause the Lactase-Persistence Phenotype in Africans","year":2004,"lang":"en","type":"article","venue":"The American Journal of Human Genetics","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":224,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"York University","funders":"Biotechnology and Biological Sciences Research Council; University College London","keywords":"Lactase; Genetics; Lactose intolerance; Biology; Allele; Allele frequency; Single-nucleotide polymorphism; Phenotype; Population; Genotype; Gene; Lactose; Demography","retraction":null,"screen_n_in":null,"score":{"opus":0.01915103838487336,"gpt":0.2549834568051951,"spread":0.2358324184203218,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007880778,0.0002305091,0.000395112,0.00005473351,0.0003084374,0.000025242,0.001108285,0.00007193286,0.000007069154],"category_scores_gemma":[0.0001085063,0.00008945848,0.0002392854,0.0002882588,0.001548541,0.000005863206,0.0001592967,0.0003312193,0.000001228185],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006548716,"about_ca_system_score_gemma":0.0004593636,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003297928,"about_ca_topic_score_gemma":0.0007201593,"domain_scores_codex":[0.9977493,0.0004696691,0.0007966822,0.0001966499,0.000417169,0.0003705015],"domain_scores_gemma":[0.9973618,0.0001336558,0.001403549,0.000763202,0.0002322369,0.0001055186],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001382162,0.0005895618,0.01552247,0.00005226361,0.0007894715,0.00003818429,0.005163957,0.004739584,0.9675551,0.0001096877,0.0005636326,0.003493934],"study_design_scores_gemma":[0.004610151,0.01221245,0.09109728,0.0006218689,0.0009843149,0.0006363281,0.01970707,0.00007187029,0.8639901,0.0007933089,0.00451132,0.0007639522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954588,0.001805306,0.00004129349,0.001934184,0.0001759661,0.0002868501,0.00006542941,0.000003420614,0.0002287561],"genre_scores_gemma":[0.9977865,0.00130464,0.0001062867,0.0003248988,0.0002343011,0.000004244744,0.000003778676,0.00003399497,0.0002013361],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.103565,"threshold_uncertainty_score":0.5705662,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2292396958","doi":"10.1242/dev.124891","title":"Stomach development, stem cells and disease","year":2016,"lang":"en","type":"review","venue":"Development","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":191,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health","keywords":"Biology; Stem cell; Stomach; Foregut; Cell biology; Organoid; Developmental biology; Mesenchymal stem cell; Embryonic stem cell; Bioinformatics; Anatomy; Gene; Genetics; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.02740539415079788,"gpt":0.2980223902602968,"spread":0.2706169961094989,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002862159,0.0004635549,0.0006881281,0.0001042184,0.0001700658,0.00002983288,0.0002198255,0.0003641855,0.0000170513],"category_scores_gemma":[0.00001011529,0.0003085222,0.0001070556,0.00007539283,0.00005220398,0.000002315707,0.0002571481,0.0001218734,0.0002693338],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001058333,"about_ca_system_score_gemma":0.00290512,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":4.518143e-7,"about_ca_topic_score_gemma":0.000001593965,"domain_scores_codex":[0.9979764,0.0001173684,0.0006269648,0.0006814797,0.0001888325,0.0004089053],"domain_scores_gemma":[0.9988488,0.00001773385,0.0002613372,0.0003025231,0.00005750275,0.0005121306],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000006905289,0.00002917993,0.00002297342,0.00635786,0.0002201681,0.00001600247,0.00004310828,3.368097e-8,0.00001333272,0.00002781106,0.002261841,0.9910008],"study_design_scores_gemma":[0.0001733549,0.00001772991,0.00004884561,0.006848017,0.00005516338,0.00001474752,0.000006031373,3.382528e-8,0.0001768423,0.000001473634,0.9921916,0.0004661365],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001050765,0.9974527,0.0002866109,0.00001191513,0.0003833204,0.0006998467,0.00003583741,0.00002344806,0.001001205],"genre_scores_gemma":[0.00004292705,0.9839029,0.0005618347,0.00005973706,0.0001234484,0.0001783581,0.0002124226,0.000066659,0.01485176],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9905347,"threshold_uncertainty_score":0.9999367,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2072450222","doi":"10.1053/j.gastro.2007.06.066","title":"Bone Morphogenetic Protein Signaling Is Essential for Terminal Differentiation of the Intestinal Secretory Cell Lineage","year":2007,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":183,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canadian Institutes of Health Research; Université de Sherbrooke","funders":"National Institutes of Health","keywords":"Cell biology; Paracrine signalling; Biology; Autocrine signalling; Bone morphogenetic protein; Cellular differentiation; Intestinal epithelium; BMPR2; Epithelium; Morphogenesis; Receptor; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.00647784119210632,"gpt":0.2345246204679849,"spread":0.2280467792758786,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003448347,0.0001304283,0.0001644136,0.0000451039,0.00008514414,0.000004771149,0.0001551472,0.0001456364,0.00001455848],"category_scores_gemma":[0.000032287,0.00009952915,0.0001342221,0.00003771807,0.0001137999,0.000001826324,0.00007594479,0.0001190756,0.000001576522],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001303708,"about_ca_system_score_gemma":0.00004581196,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001092306,"about_ca_topic_score_gemma":0.00002715444,"domain_scores_codex":[0.9988617,0.0001024776,0.0003649101,0.0002501324,0.00009461879,0.0003261977],"domain_scores_gemma":[0.9993425,0.00001395407,0.0002704313,0.0002043174,0.0001093011,0.00005948352],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005241036,0.00008832465,0.03008648,0.0001108163,0.00002663949,0.000002115099,0.0000674052,0.00002523156,0.9687936,0.000008516727,0.000148373,0.0001183814],"study_design_scores_gemma":[0.00117761,0.001313868,0.0356857,0.00005542336,0.00004537681,0.00006529231,0.00006936862,0.0001087837,0.9610322,0.00001471816,0.0003580891,0.00007361916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.95316,0.0001207774,0.04578784,0.00007967513,0.0002455666,0.0005033565,0.00002670749,0.000005308569,0.00007073555],"genre_scores_gemma":[0.9980782,0.000004221856,0.001024116,0.0001904444,0.0002505017,0.00002555456,0.00005265429,0.00001723866,0.0003570991],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04491814,"threshold_uncertainty_score":0.4058681,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2086584838","doi":"10.1053/j.gastro.2014.04.002","title":"Loss of Syntaxin 3 Causes Variant Microvillus Inclusion Disease","year":2014,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":174,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children","funders":"Oesterreichische Nationalbank; Landes Tirols; Austrian Science Fund","keywords":"Microvillus; Syntaxin 3; Vesicle; Biology; Mutation; Cell biology; Brush border; Chemistry; Molecular biology; Genetics; Gene; Membrane; Syntaxin","retraction":null,"screen_n_in":null,"score":{"opus":0.00463312534159442,"gpt":0.2268909667009715,"spread":0.2222578413593771,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002175022,0.0001230552,0.0001919727,0.00004815702,0.00008771995,0.000002890385,0.0001675974,0.0001112306,0.00001705401],"category_scores_gemma":[0.00006682159,0.0001039899,0.00007489903,0.00003002279,0.0001358923,0.00000175904,0.0004010547,0.00006815493,0.00001193388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001032466,"about_ca_system_score_gemma":0.00004200163,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003848934,"about_ca_topic_score_gemma":0.00005319678,"domain_scores_codex":[0.998908,0.0002071861,0.0002503334,0.000270085,0.00008055158,0.000283832],"domain_scores_gemma":[0.9993578,0.000009892197,0.0001321704,0.0002900071,0.00006378753,0.0001463083],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002563949,0.0004736237,0.5581627,0.0002867955,0.0002037724,0.0000691264,0.0001842768,0.0002851206,0.4332346,0.001110799,0.002537292,0.0008879216],"study_design_scores_gemma":[0.008746694,0.01072548,0.8244435,0.0003779468,0.000291444,0.0008147348,0.0001124111,0.0004133027,0.05858037,0.001160123,0.0935945,0.0007395216],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992717,0.0002259037,0.005673287,0.0005572934,0.0003005566,0.0001299184,0.00003261853,0.000009666382,0.0003537172],"genre_scores_gemma":[0.9986295,0.00008575738,0.0001778427,0.0007092312,0.0001379413,0.000008078994,0.00007841345,0.0000151228,0.0001580844],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3746542,"threshold_uncertainty_score":0.4240583,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2010666779","doi":"10.1086/520705","title":"Evidence of Still-Ongoing Convergence Evolution of the Lactase Persistence T-13910 Alleles in Humans","year":2007,"lang":"en","type":"article","venue":"The American Journal of Human Genetics","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":160,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Lactase; Persistence (discontinuity); Allele; Evolutionary biology; Convergence (economics); Biology; Genetics; Economics; Geology; Gene; Lactose; Food science","retraction":null,"screen_n_in":null,"score":{"opus":0.02594645940174299,"gpt":0.3019066580777333,"spread":0.2759601986759903,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001166442,0.0001002294,0.0002382341,0.00006902188,0.00006879553,0.000004091094,0.0004969022,0.00004232591,0.000004607076],"category_scores_gemma":[0.0001098263,0.00006117177,0.0001326218,0.0002152582,0.0006788427,0.000004449151,0.00008017017,0.000169538,4.685452e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004472162,"about_ca_system_score_gemma":0.0001952539,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007969918,"about_ca_topic_score_gemma":0.0001493692,"domain_scores_codex":[0.998629,0.000210105,0.0005999287,0.000111072,0.0002598809,0.0001900329],"domain_scores_gemma":[0.9981998,0.00006494275,0.001108124,0.0003017401,0.0002713399,0.00005409933],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002197333,0.00008093312,0.2101388,0.00006340775,0.00006794125,0.000004461657,0.001495216,0.001433922,0.7851784,0.0001152577,0.00006617118,0.001135799],"study_design_scores_gemma":[0.000515626,0.003260895,0.8299431,0.0009533546,0.00009479107,0.00008931049,0.007953318,0.00004137996,0.1565888,0.0001492949,0.0002216139,0.0001885067],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924727,0.006468205,0.0006385538,0.00008948194,0.0001174889,0.0001056484,0.0000025822,9.21894e-7,0.0001044225],"genre_scores_gemma":[0.9985356,0.001094779,0.0001841348,0.0000438869,0.00009001593,4.555192e-7,3.819875e-7,0.000009312592,0.00004141634],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6285895,"threshold_uncertainty_score":0.2501224,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2116177074","doi":"10.1152/ajpgi.00415.2001","title":"Multipotential stem cells in adult mouse gastric epithelium","year":2002,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":158,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Epithelium; Progenitor cell; Stem cell; Transgene; Cell biology; Gastrointestinal tract; Genetically modified mouse; Lineage (genetic); Gastrointestinal epithelium; Cell type; Progenitor; Intestinal epithelium; Cell; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.006949244216906739,"gpt":0.206848884342527,"spread":0.1998996401256203,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001743998,0.0002886186,0.0006059931,0.0001777127,0.00007626261,0.000008563324,0.0002637611,0.0000871349,0.00003291936],"category_scores_gemma":[0.00003794309,0.0002271077,0.0001703491,0.0001875181,0.0006720747,0.00001427385,0.0001135272,0.000417727,0.00002495698],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002535314,"about_ca_system_score_gemma":0.00005176198,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001075957,"about_ca_topic_score_gemma":0.00001015257,"domain_scores_codex":[0.9979361,0.0004164584,0.000598725,0.0004141933,0.000115963,0.0005185478],"domain_scores_gemma":[0.9985742,0.00007294755,0.0006691798,0.0002070012,0.0002617769,0.0002149084],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004756405,0.0002579131,0.002126988,0.00003599732,0.00005405149,0.00002722669,0.0001047832,0.0003626981,0.9922909,0.00003904277,0.0003640768,0.00386067],"study_design_scores_gemma":[0.0153082,0.07214655,0.6630724,0.00127725,0.000335272,0.01782685,0.006027164,0.005652213,0.2120499,0.0003451807,0.003314853,0.002644184],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988803,0.0004262164,0.0002020038,0.0001039029,0.0001520389,0.0001374835,0.0000170567,0.000007710008,0.00007324673],"genre_scores_gemma":[0.9965058,0.0009167517,0.001641499,0.0002945849,0.0004084937,0.000005318348,0.000006525278,0.0000252213,0.0001957923],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.780241,"threshold_uncertainty_score":0.9261181,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2048715361","doi":"10.1074/jbc.m100236200","title":"Intestinal Epithelial Cell Differentiation Involves Activation of p38 Mitogen-activated Protein Kinase That Regulates the Homeobox Transcription Factor CDX2","year":2001,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":155,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Cell biology; p38 mitogen-activated protein kinases; Biology; Intestinal epithelium; Transcription factor; MAPK/ERK pathway; Cellular differentiation; Protein kinase A; CDX2; Kinase; Homeobox; Epithelium; Biochemistry; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02819540603404681,"gpt":0.2447483850838395,"spread":0.2165529790497926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002269724,0.0001783667,0.0002485819,0.00002809991,0.00008023449,0.0000177044,0.000212889,0.0003450334,0.00005313463],"category_scores_gemma":[0.0001585376,0.000100354,0.0001897599,0.0001080209,0.00013629,0.00001303334,0.00002904974,0.0002667417,9.756693e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000365281,"about_ca_system_score_gemma":0.00007877732,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007880559,"about_ca_topic_score_gemma":5.019854e-7,"domain_scores_codex":[0.9988265,0.0001302548,0.0004757802,0.0001860051,0.0001916404,0.0001898449],"domain_scores_gemma":[0.9987965,0.00003670165,0.0006897612,0.0001431193,0.0002440113,0.00008988068],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006180774,0.000169345,0.004504044,0.00007664784,0.00004940581,0.000002786755,0.00006778714,0.00001651372,0.9936712,0.000002967116,0.00003769217,0.0007834868],"study_design_scores_gemma":[0.0006872737,0.0004650819,0.01744349,0.0001413871,0.00001804814,0.00004780144,0.0002060225,0.000009946149,0.980012,0.00008559449,0.0007639019,0.0001194403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979246,0.0005690495,0.0008196293,0.0001941431,0.0001209741,0.0001846952,0.00001458428,0.000007351797,0.0001650256],"genre_scores_gemma":[0.9989106,0.0003271528,0.00008754877,0.00002513807,0.0003093901,0.000005886993,0.00005998498,0.00001057079,0.0002637181],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01365924,"threshold_uncertainty_score":0.4092317,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2898290288","doi":"10.1126/sciimmunol.aar7754","title":"Type 3 cytokines IL-17A and IL-22 drive TGF-β–dependent liver fibrosis","year":2018,"lang":"en","type":"article","venue":"Science Immunology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":155,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Caprion (Canada); Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Canadian Liver Foundation","keywords":"Transforming growth factor; Fibrosis; Liver fibrosis; Interleukin; Immunology; Interleukin 17; Interleukin 23; Cytokine; Interleukin 6; Biology; Medicine; Pathology; Cell biology","retraction":null,"screen_n_in":null,"score":{"opus":0.009213056752613831,"gpt":0.2628143457525201,"spread":0.2536012889999062,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003368612,0.0001330451,0.0001419643,0.00009867079,0.0003501819,0.00003376516,0.0003187107,0.0001982902,0.00005486893],"category_scores_gemma":[0.0001317935,0.0001072364,0.00002705655,0.000265948,0.001882101,0.00001230573,0.0002947683,0.0001022411,0.000161255],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002630401,"about_ca_system_score_gemma":0.0002857213,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001186622,"about_ca_topic_score_gemma":0.00003765432,"domain_scores_codex":[0.9987267,0.00005993108,0.0001687904,0.0004915314,0.0001327386,0.0004202931],"domain_scores_gemma":[0.9991866,0.00001199691,0.00008328573,0.0003327817,0.0002985487,0.00008674899],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006744634,0.00002642349,0.002706905,0.000008008403,0.00002409778,0.000003824202,0.0001833398,9.449288e-7,0.9922922,0.0007570137,0.000456828,0.003472982],"study_design_scores_gemma":[0.0008775324,0.003867344,0.1176626,0.0000592997,0.00002859947,0.0003205775,0.0006009176,0.00006344936,0.7832983,0.0003339448,0.09240543,0.0004820217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910086,0.001884367,0.00008962845,0.0002365018,0.001038019,0.0001532919,0.00001095661,0.00001844646,0.005560138],"genre_scores_gemma":[0.9966486,0.0009738597,0.000287302,0.0001924798,0.0001839678,0.000005917776,0.00000863933,0.00001011414,0.001689186],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2089939,"threshold_uncertainty_score":0.6934679,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1996936063","doi":"10.1002/(sici)1097-0029(20000515)49:4<394::aid-jemt8>3.0.co;2-k","title":"Human cell models to study small intestinal functions: Recapitulation of the crypt-villus axis","year":2000,"lang":"en","type":"review","venue":"Microscopy Research and Technique","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":142,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Crypt; Cell biology; Biology; Chemistry; Anatomy; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.1115819476974026,"gpt":0.4154622911625049,"spread":0.3038803434651023,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001225442,0.0002740645,0.000558764,0.0002495142,0.0003717219,0.00003954112,0.0004385842,0.0004509825,0.0000201801],"category_scores_gemma":[0.00003444566,0.0001829742,0.0001496046,0.0004787628,0.000187595,0.000003239578,0.0003549052,0.0006330982,0.000009520633],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005539484,"about_ca_system_score_gemma":0.0003849789,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002601295,"about_ca_topic_score_gemma":0.0000571495,"domain_scores_codex":[0.997569,0.0006987076,0.0005384524,0.0005867668,0.0002214483,0.0003855806],"domain_scores_gemma":[0.998731,0.00003447672,0.0001558592,0.0006810942,0.0002568426,0.0001407692],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003332407,0.003706898,0.0004251289,0.0278293,0.0005509116,0.00003060335,0.000693873,0.00002617355,0.1495219,0.0003116143,0.009971026,0.8065994],"study_design_scores_gemma":[0.0004691337,0.0061473,0.0000471181,0.00941508,0.0001522225,0.00008171726,0.0001877822,0.000001724862,0.0213124,0.0005382371,0.9610775,0.0005697758],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.007532503,0.9795675,0.001211979,0.00001618479,0.00006444282,0.006733065,0.0000878108,0.00002447971,0.004762069],"genre_scores_gemma":[0.01497147,0.9779907,0.0009621958,0.00001459724,0.0001204818,0.001183218,0.0001246941,0.00007645259,0.004556158],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9511065,"threshold_uncertainty_score":0.7461469,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1966069967","doi":"10.1053/gast.2002.33600","title":"Lactose malabsorption and intolerance and peak bone mass","year":2002,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":137,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Hospital Foundation","funders":"","keywords":"Medicine; Lactose intolerance; Malabsorption; Internal medicine; Bone mineral; Bloating; Peak bone mass; Endocrinology; Calcium; Osteoporosis; Lactose; Bone remodeling; Gastroenterology; Bone density; Osteocalcin; Diarrhea; Food science; Chemistry; Alkaline phosphatase; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.007504844124361808,"gpt":0.2056807484919496,"spread":0.1981759043675878,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000830643,0.00009735315,0.0001251606,0.00003130709,0.00004639708,0.000008877098,0.00003663646,0.0001170481,0.00002690059],"category_scores_gemma":[0.00001043385,0.00008813949,0.00001875038,0.00001789474,0.0001039266,0.000003086233,0.00004157106,0.00007756723,0.0000152317],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000472224,"about_ca_system_score_gemma":0.000002658748,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005307827,"about_ca_topic_score_gemma":0.00001460835,"domain_scores_codex":[0.9992915,0.00006929736,0.0001336043,0.0002457605,0.00003745516,0.0002223656],"domain_scores_gemma":[0.9997208,0.000003394588,0.0000533575,0.0001152014,0.0000226888,0.00008453026],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002994182,0.0001049426,0.4907234,0.0001138094,0.00008876721,0.00002946983,0.0002069964,0.0000145406,0.5000706,0.0001795876,0.003708595,0.004459808],"study_design_scores_gemma":[0.006031095,0.005285593,0.9397177,0.00008878078,0.00006501912,0.001802621,0.0001912932,0.0009549104,0.00450444,0.0001869553,0.04076892,0.0004027098],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958083,0.00169926,0.0006005618,0.0008577468,0.0001148592,0.00009847862,0.0000065951,0.000008385977,0.0008058368],"genre_scores_gemma":[0.9969696,0.001253184,0.0002360608,0.0006036539,0.0000908912,0.000008471918,0.0000123024,0.000009840242,0.0008159601],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4955662,"threshold_uncertainty_score":0.3594224,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4231659875","doi":"10.3390/nu11071684","title":"Food Intolerances","year":2019,"lang":"en","type":"review","venue":"Nutrients","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":136,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"Danone","keywords":"Medicine; Food intolerance; Food allergy; Population; Gluten; Food hypersensitivity; Food science; Intensive care medicine; Immunology; Allergy; Environmental health; Pathology; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.04927494257415151,"gpt":0.3451960333999499,"spread":0.2959210908257984,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000109171,0.0002698072,0.0007421696,0.00006301699,0.00004549222,0.00001679089,0.0002676343,0.0005928293,0.00001186586],"category_scores_gemma":[0.00002086124,0.0001982723,0.0003100386,0.0001189145,0.00003148743,0.000001219879,0.00008712171,0.0001769652,0.0004841755],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002472872,"about_ca_system_score_gemma":0.0002517609,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001934721,"about_ca_topic_score_gemma":0.000001048516,"domain_scores_codex":[0.9987251,0.0001004654,0.0003459767,0.000438189,0.0001333432,0.0002569365],"domain_scores_gemma":[0.9992235,0.000009297132,0.0002345539,0.0003979507,0.0000492449,0.00008541906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001503401,0.000110463,0.00006189737,0.02355776,0.0003893432,0.000002607373,0.00001445018,3.406052e-7,0.000002749126,0.0001807029,0.007016919,0.9686477],"study_design_scores_gemma":[0.0002113064,0.0004134388,0.000003029743,0.004692245,0.0001239784,0.00001467275,0.000003754454,8.042525e-8,0.000008536768,0.000007111903,0.9943052,0.0002166287],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00004485049,0.9892157,0.00001848638,0.000003786533,0.001153191,0.0006818331,0.00006761603,0.00001177608,0.008802751],"genre_scores_gemma":[0.0001746604,0.995942,0.00001942295,0.00003918753,0.0003719831,0.00005167687,0.0004565079,0.00004441096,0.002900151],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9872883,"threshold_uncertainty_score":0.8085311,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2065546267","doi":"10.1016/j.ydbio.2009.12.025","title":"Cdx2 regulates patterning of the intestinal epithelium","year":2010,"lang":"en","type":"article","venue":"Developmental Biology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":133,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"","keywords":"CDX2; Biology; Intestinal epithelium; Mesenchyme; Cell biology; Epithelium; Homeobox; Transcription factor; Embryonic stem cell; Mutant; Phenotype; Genetics; Embryo; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.006189027242305074,"gpt":0.2361170053729843,"spread":0.2299279781306793,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001485585,0.00009851799,0.0001089404,0.00001733923,0.00006991518,0.000003102994,0.0002138165,0.0001770294,0.00005208063],"category_scores_gemma":[0.00009435388,0.00006203159,0.00004765405,0.00006187242,0.0001900127,0.000001177501,0.0001639644,0.0001445632,0.00001757425],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005327244,"about_ca_system_score_gemma":0.0001149834,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002598239,"about_ca_topic_score_gemma":0.00003167293,"domain_scores_codex":[0.9993223,0.0000539866,0.0002088543,0.0001959617,0.00004181437,0.0001770796],"domain_scores_gemma":[0.9996577,0.00001295148,0.0001067287,0.0001217628,0.00005226213,0.00004863336],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001341701,0.0000115898,0.2119171,0.00001117099,0.00001760179,3.17501e-7,0.00007167718,6.956006e-7,0.7860232,0.0001524378,0.0002286129,0.001552194],"study_design_scores_gemma":[0.0002878038,0.0001270486,0.1612043,0.0000252796,0.000005095662,0.00008519394,0.0001017458,0.000004242388,0.8162457,0.00006358881,0.02171832,0.000131649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958905,0.00008788853,0.00008491101,0.0002908904,0.000434968,0.0001137062,0.00001126032,0.000007194454,0.003078663],"genre_scores_gemma":[0.9982353,0.00001166188,0.0009146389,0.0003923567,0.00009513446,0.00000614648,0.00004443404,0.000009147217,0.0002911947],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05071279,"threshold_uncertainty_score":0.2529575,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2155585542","doi":"10.1016/j.ajhg.2009.01.004","title":"Mutations in SPINT2 Cause a Syndromic Form of Congenital Sodium Diarrhea","year":2009,"lang":"en","type":"article","venue":"The American Journal of Human Genetics","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Austrian Science Fund","keywords":"Diarrhea; Medicine; Gastroenterology","retraction":null,"screen_n_in":null,"score":{"opus":0.01200243071789885,"gpt":0.2931461174319665,"spread":0.2811436867140676,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000275802,0.00009993405,0.0002479694,0.00008923979,0.00005423033,0.000008415625,0.0002301559,0.00003977515,0.000003577882],"category_scores_gemma":[0.00002292958,0.00007065572,0.00009782274,0.0001247249,0.0002561358,0.00000282319,0.00002201509,0.0001449429,0.00000192203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002101226,"about_ca_system_score_gemma":0.0001378912,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001584618,"about_ca_topic_score_gemma":0.00003133081,"domain_scores_codex":[0.9990533,0.00009640969,0.0004712059,0.00008844415,0.0001145464,0.0001761056],"domain_scores_gemma":[0.9990509,0.00001456708,0.0005385745,0.0001878166,0.0001343593,0.00007381273],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00050637,0.0006496093,0.02866344,0.00004462274,0.0005579324,0.0001218556,0.003795356,0.001173192,0.9465965,0.0007597887,0.0007511003,0.01638022],"study_design_scores_gemma":[0.004480273,0.03089879,0.7722833,0.0003403021,0.0004680267,0.002542368,0.005460408,0.0001501652,0.1759694,0.005453774,0.001127984,0.0008251886],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981272,0.001049624,0.0001182481,0.0002425525,0.00006774307,0.0001053263,0.000005844423,0.000001526138,0.0002819708],"genre_scores_gemma":[0.9991529,0.0003508593,0.0001912881,0.0001261641,0.0001048875,8.975862e-7,0.000004407109,0.0000103983,0.00005822208],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7706271,"threshold_uncertainty_score":0.2881257,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2059683079","doi":"10.3390/ijms12084885","title":"The Chemical Composition and Nitrogen Distribution of Chinese Yak (Maiwa) Milk","year":2011,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":120,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Natural Science Foundation of China","keywords":"Lactose; Food science; Amino acid; Casein; Composition (language); Essential amino acid; Chemistry; YAK; Ingredient; Nutrient; Biology; Animal science; Biochemistry; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.009685605316469554,"gpt":0.2754170889145514,"spread":0.2657314835980819,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003982587,0.00005231279,0.00006793657,0.00002778449,0.00005637152,0.0000180538,0.0002751774,0.00004268161,0.000002109118],"category_scores_gemma":[0.00005646432,0.00003101785,0.00005938675,0.00005419244,0.0002705943,0.00000803524,0.00004966296,0.00005125043,3.843107e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009073844,"about_ca_system_score_gemma":0.00007065027,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009363086,"about_ca_topic_score_gemma":9.770195e-7,"domain_scores_codex":[0.999311,0.00004574921,0.000226961,0.00007928946,0.0002618172,0.00007517602],"domain_scores_gemma":[0.9993882,0.00001308416,0.0002279876,0.00004668249,0.0002814544,0.0000426094],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001202225,0.0000616659,0.01833721,0.000003698563,0.0001037362,0.00001313003,0.0001106992,0.0000176008,0.9777114,0.001928546,0.00006605668,0.001525965],"study_design_scores_gemma":[0.0007571089,0.0005393639,0.02722033,0.00008371937,0.0000245973,0.0007489937,0.0002105266,0.00006990549,0.9641788,0.005183939,0.000851937,0.0001308054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952929,0.001367085,0.002097383,0.0002476547,0.0002489534,0.00003477449,0.000007180187,9.194823e-7,0.0007031304],"genre_scores_gemma":[0.9992557,0.0002515063,0.0003718218,0.00004277902,0.00006272773,6.345143e-7,0.000007324902,0.000002147468,0.000005358215],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01353269,"threshold_uncertainty_score":0.1264871,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2465964107","doi":"10.1111/nmo.12871","title":"The complex task of measuring intestinal permeability in basic and clinical science","year":2016,"lang":"en","type":"review","venue":"Neurogastroenterology & Motility","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Population Health Research Institute","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Intestinal permeability; Task (project management); Computer science; Medicine; Engineering; Internal medicine; Systems engineering","retraction":null,"screen_n_in":null,"score":{"opus":0.06484468619078865,"gpt":0.371270995110718,"spread":0.3064263089199294,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003238503,0.0003018253,0.0009982578,0.00008608238,0.0001596921,0.00001530282,0.0006281221,0.0002740262,0.000003379919],"category_scores_gemma":[0.001205587,0.0001792552,0.0002747506,0.0001353131,0.002226845,0.000005298776,0.0005400216,0.0005052343,0.000004281254],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005121598,"about_ca_system_score_gemma":0.0004086608,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001671099,"about_ca_topic_score_gemma":0.00006826475,"domain_scores_codex":[0.9956885,0.00146274,0.001164104,0.0009472122,0.0001902022,0.0005472574],"domain_scores_gemma":[0.9981428,0.0002456678,0.0005097843,0.0007673994,0.0001690689,0.0001652809],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000967874,0.0004309892,0.4981391,0.003518424,0.0001350548,0.00001470312,0.00001597856,0.000001020456,0.0004791498,0.00004061012,0.00008524175,0.497043],"study_design_scores_gemma":[0.001036516,0.001906306,0.7839065,0.002474144,0.0001527826,0.0002946379,0.00001269646,0.0000234262,0.00001347427,0.00002772933,0.2100575,0.00009434161],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.3543091,0.6434793,0.00007967217,0.0001383729,0.0006687417,0.001036713,0.00007186372,0.0000132431,0.0002030223],"genre_scores_gemma":[0.3020796,0.6977372,0.00002088,0.00003291605,0.0000731258,0.00001824931,0.000009873908,0.00001571371,0.00001249907],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.4969486,"threshold_uncertainty_score":0.8204902,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2140932205","doi":"10.3945/jn.109.117267","title":"Early Weaning Reduces Small Intestinal Alkaline Phosphatase Expression in Pigs","year":2010,"lang":"en","type":"article","venue":"Journal of Nutrition","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Alkaline phosphatase; Weaning; Jejunum; Enterocyte; Biology; Internal medicine; Endocrinology; Crypt; Small intestine; Gene expression; Enzyme; Biochemistry; Gene; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01256274012128815,"gpt":0.2675677417826557,"spread":0.2550050016613676,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003673286,0.00007476629,0.0001201078,0.00008881805,0.00003586915,0.00001629516,0.00009584115,0.0001366673,0.0000119125],"category_scores_gemma":[0.0001362856,0.00006077564,0.00005595577,0.00006728377,0.00002707341,0.000009651093,0.00002002658,0.0002961641,0.000003638024],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001077597,"about_ca_system_score_gemma":0.00005874977,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001228874,"about_ca_topic_score_gemma":0.0000120885,"domain_scores_codex":[0.9992971,0.00005174079,0.0003340093,0.0000993271,0.0000945478,0.0001232841],"domain_scores_gemma":[0.9994169,0.00001457581,0.0002575939,0.00007452415,0.000151973,0.0000844712],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001870326,0.0002674569,0.002745915,0.00003364109,0.000005974729,0.00003524447,0.00004355912,0.000005583201,0.994677,0.00002574126,0.001055947,0.0009168749],"study_design_scores_gemma":[0.003354977,0.001541506,0.03293318,0.00153306,0.00001904892,0.0007751429,0.0002604225,0.00002108272,0.9443743,0.0003452248,0.01464532,0.0001968049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974999,0.001255108,0.0002821581,0.0002153564,0.0004211247,0.00008578915,0.000004928553,0.00000264756,0.0002330291],"genre_scores_gemma":[0.9950984,0.0003393666,0.003829065,0.00004188188,0.0006051046,0.000002860109,0.00002550284,0.000008711798,0.00004918232],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0503028,"threshold_uncertainty_score":0.2478359,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2790349655","doi":"10.1186/s12864-018-4564-6","title":"Characterization of the human RFX transcription factor family by regulatory and target gene analysis","year":2018,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"Horizon 2020; Helse Sør-Øst RHF; Radiumhospitalets Forskningsstifltelse; Åhlén-stiftelsen; Stiftelsen Lars Hiertas Minne; Vetenskapsrådet; Universitetet i Oslo; Genome Canada; Hjärnfonden; Norges Forskningsråd; Svenska Sällskapet för Medicinsk Forskning; Fredrik och Ingrid Thurings Stiftelse; Torsten Söderbergs Stiftelse; BC Children’s Hospital Foundation; Royal Swedish Academy of Sciences; Child and Family Research Institute; Karolinska Institutet","keywords":"Biology; Computational biology; Genetics; Transcription factor; Gene; DNA microarray; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.01216861845772781,"gpt":0.2310556619444478,"spread":0.21888704348672,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000855833,0.00007782978,0.0001146581,0.0000301082,0.00009628374,0.000007709048,0.00008001406,0.000125809,0.000005527911],"category_scores_gemma":[0.000004001527,0.0000595347,0.00007023256,0.00008572509,0.00009268442,0.000002398352,0.00002199065,0.00002992303,0.000001074829],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001345419,"about_ca_system_score_gemma":0.00004529274,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001798891,"about_ca_topic_score_gemma":0.00002745706,"domain_scores_codex":[0.9994357,0.00005673903,0.0001806645,0.0001723511,0.00005786017,0.00009669633],"domain_scores_gemma":[0.9995837,0.000001480849,0.0001207785,0.0001902623,0.00006751128,0.00003632689],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001072153,0.00001469371,0.01937065,0.00001542892,0.00008023093,1.764826e-8,0.0001215338,0.00000456918,0.9802463,0.00002068053,0.00004020677,0.00007492969],"study_design_scores_gemma":[0.0001514413,0.00006258403,0.3360899,0.000003222076,0.00006015721,5.398326e-7,0.00002510656,0.00004190461,0.6605072,0.000008324756,0.002985843,0.00006379694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952216,0.0002653773,0.003975955,0.00001532674,0.0001063786,0.0001436117,0.0001344296,0.000003830702,0.0001335056],"genre_scores_gemma":[0.9988602,0.0000823726,0.0001645999,0.00006523617,0.0001002965,0.000002761801,0.0002585975,0.00001036717,0.0004555595],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3197391,"threshold_uncertainty_score":0.2427754,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2185778133","doi":"10.1093/ajcn/72.6.1474","title":"Chronic consumption of fresh but not heated yogurt improves breath-hydrogen status and short-chain fatty acid profiles: a controlled study in healthy men with or without lactose maldigestion","year":2000,"lang":"en","type":"article","venue":"American Journal of Clinical Nutrition","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Lactose; Malabsorption; Food science; Propionate; Ingestion; Chemistry; Fatty acid; Lactobacillus; Streptococcus thermophilus; Internal medicine; Endocrinology; Fermentation; Biochemistry; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.02175688723737399,"gpt":0.3490339708153133,"spread":0.3272770835779393,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001196392,0.0001991097,0.001053465,0.0001004389,0.00005293485,0.00001439616,0.00009234263,0.0001607933,0.00001600048],"category_scores_gemma":[0.000120605,0.0001344347,0.0001172565,0.0001581626,0.0003704641,0.0000200907,0.00001575154,0.0003324442,0.000001081474],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005151921,"about_ca_system_score_gemma":0.0004509096,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001751932,"about_ca_topic_score_gemma":0.0002086732,"domain_scores_codex":[0.9968204,0.0008014037,0.001498548,0.0003227042,0.0002600187,0.0002969299],"domain_scores_gemma":[0.9984033,0.000123414,0.0008052666,0.0001750548,0.0002310217,0.0002619506],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.1633055,0.003658234,0.680411,0.0002821108,0.0006532187,0.00006341338,0.0003173075,0.00006185332,0.07970237,0.000003625886,0.00004104235,0.07150034],"study_design_scores_gemma":[0.103402,0.1766864,0.68757,0.001708806,0.0005110104,0.0004449413,0.003852245,0.000569169,0.02420711,0.00002033287,0.0003638915,0.0006640684],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969805,0.001150145,0.00007739168,0.0002517392,0.00003801094,0.001428192,0.00003085954,0.000006895778,0.00003627344],"genre_scores_gemma":[0.9916061,0.00759772,0.0003524482,0.0001040462,0.000212367,0.00004754482,0.00003222224,0.00002179875,0.0000257152],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1730282,"threshold_uncertainty_score":0.5482087,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2110847887","doi":"10.1158/1055-9965.epi-05-0484","title":"Dairy Products and Ovarian Cancer: A Pooled Analysis of 12 Cohort Studies","year":2006,"lang":"en","type":"article","venue":"Cancer Epidemiology Biomarkers & Prevention","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"National Cancer Institute","keywords":"Medicine; Ovarian cancer; Relative risk; Lactose; Cohort study; Cohort; Confidence interval; Population; Cancer; Internal medicine; Gynecology; Environmental health; Food science; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.03483778280575633,"gpt":0.3628900456714251,"spread":0.3280522628656687,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001580452,0.0001926473,0.0006822562,0.0001798019,0.00009530663,0.000002749671,0.00009502367,0.0002773037,0.00001508652],"category_scores_gemma":[0.0002411332,0.0001623929,0.0001721602,0.0003438492,0.0003182466,0.000006648766,0.00006795419,0.00007426248,7.562273e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006589738,"about_ca_system_score_gemma":0.0001637259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001639317,"about_ca_topic_score_gemma":0.001763288,"domain_scores_codex":[0.9977197,0.0006248237,0.0006701074,0.0006053223,0.00007028972,0.0003097335],"domain_scores_gemma":[0.9988493,0.00007576933,0.0005254644,0.0002877361,0.0001997981,0.00006188215],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001981696,0.00006091724,0.9442005,0.0001869382,0.01384801,0.000001138115,0.00003513031,0.0003344769,0.02939438,0.0003198551,0.007398347,0.004022151],"study_design_scores_gemma":[0.000623337,0.0001704033,0.9859378,0.0001620801,0.004015755,0.000003533417,0.00007638248,0.0001427759,0.003909427,0.000690555,0.004052583,0.0002153451],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8475319,0.1482431,0.0007125456,0.001960275,0.000558026,0.000582021,0.00005544234,0.00001822016,0.0003385298],"genre_scores_gemma":[0.9806903,0.01638055,0.0005626429,0.0001641582,0.0002279249,0.0001948988,0.0003547219,0.00001590743,0.001408925],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1331584,"threshold_uncertainty_score":0.6622191,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3000350241","doi":"10.1038/s41467-019-14058-5","title":"Single cell and genetic analyses reveal conserved populations and signaling mechanisms of gastrointestinal stromal niches","year":2020,"lang":"en","type":"article","venue":"Nature Communications","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":108,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; University of Ottawa; Hospital for Sick Children; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canada First Research Excellence Fund; Canadian Institutes of Health Research; Hospital for Sick Children; University of Toronto","keywords":"Wnt signaling pathway; Stromal cell; Biology; Stem cell; Cell biology; Transcriptome; Cell polarity; Signal transduction; Cell; Genetics; Cancer research; Gene; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.06666041145751334,"gpt":0.3258990084753178,"spread":0.2592385970178045,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006225038,0.00009133767,0.0001320062,0.00002826239,0.0001360961,0.00001341328,0.0001875896,0.0001285737,0.000001569013],"category_scores_gemma":[0.0001170043,0.00008602297,0.00003482643,0.00009522505,0.0001192102,0.00000339191,0.0001761859,0.0002169315,4.774262e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000456982,"about_ca_system_score_gemma":0.00004969312,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002089073,"about_ca_topic_score_gemma":0.00007360424,"domain_scores_codex":[0.999329,0.0001272747,0.0002143953,0.0001664518,0.00006234085,0.0001005177],"domain_scores_gemma":[0.9992871,0.00004335444,0.0001293417,0.0003316975,0.0001115505,0.00009698136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001439929,0.00004510305,0.01911453,0.00003885481,0.00001717777,7.083116e-7,0.0000518097,0.00003754057,0.9797632,0.0007434305,0.0001152247,0.00005803611],"study_design_scores_gemma":[0.00285895,0.003680219,0.3137309,0.0004957109,0.000616468,0.0004194311,0.002708219,0.002836876,0.6675987,0.001790424,0.002293189,0.0009709023],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9823281,0.01137542,0.003538679,0.001882482,0.00002080339,0.0001908623,0.00004704623,0.00001445591,0.0006021622],"genre_scores_gemma":[0.9443812,0.000120829,0.05514922,0.0001949854,0.00002100792,0.000004527042,0.00009510309,0.00001002273,0.00002308269],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3121645,"threshold_uncertainty_score":0.3507915,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2023304735","doi":"10.4240/wjgs.v3.i11.159","title":"CDX2 as a marker for intestinal differentiation: Its utility and limitations","year":2011,"lang":"en","type":"article","venue":"World Journal of Gastrointestinal Surgery","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":107,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Sunnybrook Health Science Centre","funders":"","keywords":"CDX2; Homeobox A1; Homeobox; Homeobox protein Nkx-2.5; Gastrointestinal tract; Embryonic stem cell; Biology; DLX5; Transcription factor; EMX2; Cancer research; Cellular differentiation; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.05980360718220699,"gpt":0.2686739481386496,"spread":0.2088703409564427,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007249385,0.000145997,0.0002541982,0.000160444,0.0001006255,0.00001944128,0.00008833398,0.00003643181,0.00004495613],"category_scores_gemma":[0.001597642,0.0001211311,0.0001815156,0.0001135798,0.00007976566,0.00001329892,0.00003560577,0.0001503401,0.000004027292],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001395436,"about_ca_system_score_gemma":0.0002155821,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005708307,"about_ca_topic_score_gemma":0.00002819897,"domain_scores_codex":[0.9988068,0.0001071769,0.0005415861,0.0001734908,0.0001291083,0.0002418546],"domain_scores_gemma":[0.9983817,0.0003223208,0.0004493913,0.0001047705,0.0005402373,0.0002016303],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00235277,0.0004289004,0.9538299,0.0002243337,0.0001541411,0.00008498013,0.000121898,0.000003598902,0.02135309,0.0006587275,0.007183217,0.01360437],"study_design_scores_gemma":[0.0006296829,0.001071205,0.9807644,0.0007403328,0.00008816557,0.005235611,0.0001482407,0.00006556057,0.003088421,0.000558629,0.007398461,0.0002112948],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9816187,0.001152031,0.01108472,0.0003603866,0.0003822947,0.000220288,0.000009937872,0.000009796451,0.005161864],"genre_scores_gemma":[0.9929244,0.0000952441,0.00576394,0.00009625735,0.0002314999,0.000006986658,0.00001228037,0.00001653215,0.0008528967],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02693443,"threshold_uncertainty_score":0.4939582,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1509100958","doi":"10.1016/s0076-6879(06)19014-x","title":"Intestinal Epithelial Stem Cells and Progenitors","year":2006,"lang":"en","type":"review","venue":"Methods in enzymology on CD-ROM/Methods in enzymology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":107,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Progenitor cell; Stem cell; Intestinal epithelium; Cell biology; Progenitor; Biology; Epithelium; Adult stem cell; Immunology; In vivo; Basement membrane; Intestinal mucosa; In vitro; Endothelial stem cell; Medicine; Internal medicine; Biochemistry; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.0639768303412718,"gpt":0.4419081536442345,"spread":0.3779313233029628,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow","research_integrity"],"category_scores_codex":[0.01119865,0.001687457,0.004905707,0.001567131,0.0001825529,0.00004158766,0.001166986,0.005148949,0.00004031116],"category_scores_gemma":[0.00115752,0.001478786,0.0006816117,0.001033195,0.001277713,0.00001186002,0.0007696042,0.003014215,0.00004828073],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003581766,"about_ca_system_score_gemma":0.0008640494,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000270596,"about_ca_topic_score_gemma":0.000317837,"domain_scores_codex":[0.9651922,0.02684248,0.003008973,0.002849989,0.000256184,0.001850174],"domain_scores_gemma":[0.9931023,0.003597012,0.001362523,0.001431704,0.0001569624,0.0003494907],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000204968,0.0005914061,0.0004505335,0.004421243,0.0002932862,0.0005536063,0.0001074572,0.00004018405,0.008443257,0.00133196,0.0006354757,0.9829266],"study_design_scores_gemma":[0.001751671,0.002540732,0.0006677435,0.003249138,0.0004405197,0.00300857,0.00007883244,0.00001021761,0.003806504,0.001629861,0.980997,0.001819199],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002026089,0.9702688,0.01705675,0.00004865817,0.004799568,0.002652503,0.0001227677,0.0000852984,0.002939513],"genre_scores_gemma":[0.00005575873,0.574402,0.4220467,0.0002112449,0.0007248812,0.000661525,0.0001379614,0.0002435926,0.001516389],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9811074,"threshold_uncertainty_score":0.9995872,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2111281606","doi":"10.1046/j.1365-2036.2002.01321.x","title":"Lactose — a potential prebiotic","year":2002,"lang":"en","type":"review","venue":"Alimentary Pharmacology & Therapeutics","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Prebiotic; Medicine; Lactose; Lactose intolerance; Ingestion; Population; Food science; Intensive care medicine; Environmental health; Internal medicine; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.05200047566320773,"gpt":0.3696835977513743,"spread":0.3176831220881666,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001973083,0.0006484236,0.00102944,0.0001317499,0.0001739738,0.00002275676,0.0005169007,0.0009401251,0.0004607375],"category_scores_gemma":[1.365856e-7,0.0005412739,0.0005531532,0.00016309,0.0001916809,0.000004408429,0.0002006284,0.000549265,0.0003896192],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009362843,"about_ca_system_score_gemma":0.000260794,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008937108,"about_ca_topic_score_gemma":0.000001268007,"domain_scores_codex":[0.9971026,0.0006547689,0.000679469,0.0007356298,0.0001791947,0.0006483392],"domain_scores_gemma":[0.9989021,0.00003278505,0.0003950348,0.0004252197,0.00005434975,0.000190505],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001832997,0.002515306,0.00005799222,0.01370464,0.1173446,0.0004737489,0.0001981851,0.00003459095,0.008127354,0.00003016605,0.02980214,0.827528],"study_design_scores_gemma":[0.0006878955,0.0004608888,0.000001957405,0.000501616,0.02263417,0.0002822079,0.00001138611,0.000008930639,0.0003607195,0.000003454298,0.9745408,0.0005060228],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001283208,0.9947755,0.00002250535,0.0001486759,0.0026408,0.001243577,0.0001340127,0.00004214702,0.0008644406],"genre_scores_gemma":[0.0002573232,0.9905983,0.00006217664,0.003812606,0.00117927,0.00009322663,0.0008610031,0.0001326731,0.003003382],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9447386,"threshold_uncertainty_score":0.9997039,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1941812639","doi":"10.1093/jn/138.4.685","title":"Luminal Starch Substrate “Brake” on Maltase-Glucoamylase Activity Is Located within the Glucoamylase Subunit3","year":2008,"lang":"en","type":"article","venue":"Journal of Nutrition","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Ontario Institute for Cancer Research; University of Toronto","funders":"","keywords":"Chemistry; Maltotriose; Biochemistry; Acarbose; Enzyme; Protein subunit; Maltose; Protamine; Hydrolysis; Active site; Stereochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.02479496595852968,"gpt":0.2741528903185286,"spread":0.249357924359999,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005606384,0.0001768607,0.0002231127,0.0001108282,0.0002676028,0.00002320404,0.0001921443,0.0002066972,0.00001939047],"category_scores_gemma":[0.00006032366,0.0001202456,0.0001611375,0.0001890241,0.0001613898,0.00001692867,0.00002192674,0.0004422521,0.0000221323],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005597891,"about_ca_system_score_gemma":0.0002985233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003812351,"about_ca_topic_score_gemma":0.00001584888,"domain_scores_codex":[0.9985048,0.0002773335,0.0004349862,0.0001930239,0.0003480331,0.0002418818],"domain_scores_gemma":[0.9987204,0.00003928061,0.0004837569,0.0002277493,0.0003575313,0.0001712652],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.01130405,0.004938606,0.005692893,0.0004448658,0.0004966003,0.00108694,0.0009331969,0.0005040895,0.9305945,0.0001568347,0.0420734,0.001774018],"study_design_scores_gemma":[0.005270081,0.007517216,0.03385965,0.0005030837,0.00009665293,0.003464458,0.0005936248,0.0001249653,0.9317211,0.000166493,0.01628399,0.0003986838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965994,0.0008256445,0.0001210326,0.001446421,0.0003732539,0.0002416821,0.00004082876,0.000006424338,0.0003453144],"genre_scores_gemma":[0.9973016,0.001245559,0.00007477216,0.0004081815,0.0006810568,0.000006844311,0.0000335734,0.00002012325,0.0002283316],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02816676,"threshold_uncertainty_score":0.4903475,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2973507295","doi":"10.1038/s41467-019-11811-8","title":"VAMP8-mediated MUC2 mucin exocytosis from colonic goblet cells maintains innate intestinal homeostasis","year":2019,"lang":"en","type":"article","venue":"Nature Communications","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Calgary; Cumming School of Medicine, University of Calgary; Government of Canada; Crohn's and Colitis Canada","keywords":"Mucin; Exocytosis; Cell biology; Homeostasis; Mucin 2; Goblet cell; Innate immune system; Biology; Chemistry; Immunology; Secretion; Epithelium; Immune system; Biochemistry; Gene expression; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.0107115207227462,"gpt":0.2752835029065984,"spread":0.2645719821838521,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002903471,0.0002142007,0.000244898,0.00009505157,0.0002070858,0.00003498115,0.001073322,0.0006999719,0.0000784447],"category_scores_gemma":[0.0001832776,0.0001981972,0.0001123018,0.0003272781,0.0001409576,0.000007707571,0.0005112157,0.0009357962,0.000420739],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008145229,"about_ca_system_score_gemma":0.0002586049,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002171314,"about_ca_topic_score_gemma":0.0006922029,"domain_scores_codex":[0.9984716,0.000317044,0.0003424315,0.0003843145,0.0001589702,0.0003257018],"domain_scores_gemma":[0.9972687,0.0002059107,0.0001995613,0.001924599,0.0002552764,0.0001459109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002390637,0.0009094906,0.05869098,0.000099654,0.000662655,0.000009240757,0.0006993015,0.0001015318,0.884521,0.005634218,0.04610126,0.002331602],"study_design_scores_gemma":[0.002738378,0.0007806079,0.06598265,0.000330062,0.0001523641,0.00003034296,0.0008917043,0.0006210044,0.07843763,0.0003188104,0.8487005,0.001015916],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9694111,0.01622479,0.00009856982,0.003441122,0.0005478413,0.0007250594,0.0004819326,0.00008048723,0.008989064],"genre_scores_gemma":[0.9901024,0.003552001,0.002066385,0.001101701,0.00007473348,0.00004699589,0.002345116,0.00003852448,0.00067219],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8060834,"threshold_uncertainty_score":0.8082249,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2345650612","doi":"10.1038/nsmb.3227","title":"Lactase nonpersistence is directed by DNA-variation-dependent epigenetic aging","year":2016,"lang":"en","type":"article","venue":"Nature Structural & Molecular Biology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children; University of Toronto; Centre for Addiction and Mental Health","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Mental Health; Canadian Institutes of Health Research","keywords":"Epigenetics; Lactase; Biology; DNA methylation; Genetics; Lactose intolerance; Bisulfite sequencing; Quantitative trait locus; Phenotype; Gene; Gene expression; Lactose; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.002850507097684943,"gpt":0.2702089204732649,"spread":0.26735841337558,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001531388,0.0003318662,0.0002814459,0.0000747667,0.0001524615,0.0000202332,0.000357543,0.001011139,0.0001020379],"category_scores_gemma":[0.000165173,0.0002180283,0.0001581146,0.0001490947,0.0001596684,0.000006363245,0.0001300406,0.0002908768,0.00002957056],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005709381,"about_ca_system_score_gemma":0.0001201991,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004657927,"about_ca_topic_score_gemma":0.00001199324,"domain_scores_codex":[0.9978858,0.0002595035,0.0003360589,0.0007985642,0.0001721255,0.0005479475],"domain_scores_gemma":[0.9989162,0.00002448966,0.0001902878,0.0004788938,0.0002013732,0.0001887361],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004722602,0.00001030883,0.001618451,0.00001477509,0.000134297,0.0000108931,0.00003692493,0.000001610086,0.9937388,0.0006438284,0.001443181,0.002299746],"study_design_scores_gemma":[0.001390933,0.0003835578,0.008549156,0.00005710392,0.00006015919,0.0001034498,0.00002345861,0.00001426203,0.9707713,0.0009909159,0.01707082,0.000584944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9802834,0.009458696,0.003725597,0.003647931,0.001034885,0.0004351824,0.0004019498,0.00007570459,0.0009366436],"genre_scores_gemma":[0.9957665,0.0002395977,0.0004222141,0.002064637,0.0001770831,0.00001714607,0.0003043528,0.00003729656,0.000971134],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02296752,"threshold_uncertainty_score":0.8890937,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2050730487","doi":"10.1159/000141762","title":"MITOTIC ACTIVITY AND RENEWAL RATE OF THE EPITHELIAL CELLS OF HUMAN DUODENUM","year":2008,"lang":"en","type":"article","venue":"Acta Anatomica","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":94,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"","keywords":"Duodenum; Mitosis; Biology; Epithelium; Cell biology; Andrology; Anatomy; Internal medicine; Genetics; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.009129471946979306,"gpt":0.2388306602094956,"spread":0.2297011882625163,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001073615,0.00007862064,0.0001488132,0.00001908001,0.00008744511,0.000001725597,0.0001185822,0.0001199517,0.000005682508],"category_scores_gemma":[0.00002008021,0.00005451792,0.00006298008,0.00005034244,0.0002030134,0.000001958902,0.0000732671,0.0000641814,9.908965e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005764309,"about_ca_system_score_gemma":0.00008595587,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002123354,"about_ca_topic_score_gemma":0.00004749439,"domain_scores_codex":[0.9994305,0.00009871799,0.0001472042,0.0001498399,0.00005875367,0.0001149627],"domain_scores_gemma":[0.9995232,0.00001313114,0.0001421043,0.0002382027,0.00004279131,0.00004054371],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003361628,0.0000398683,0.003404687,0.00003143929,0.00003098094,8.399339e-7,0.00007782158,0.000001063748,0.9958712,0.00004143923,0.0004278788,0.00003920709],"study_design_scores_gemma":[0.0003415906,0.0001135731,0.0399965,0.00001813553,0.00001354184,0.000009205301,0.00001984054,0.000005654335,0.9586586,0.00005922027,0.000703099,0.0000609831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980631,0.0001433047,0.000003545669,0.0001057171,0.0001113774,0.0001132996,0.00002234451,0.000002505218,0.001434801],"genre_scores_gemma":[0.9990739,0.0002184317,0.000009625881,0.00003085966,0.00004299242,0.000001399738,0.000003366409,0.000008664064,0.0006107669],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03721251,"threshold_uncertainty_score":0.2223176,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2942872262","doi":"10.1073/pnas.1817815116","title":"Mutations in <i>MAGT1</i> lead to a glycosylation disorder with a variable phenotype","year":2019,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Alberta Children's Hospital","funders":"National Institute of General Medical Sciences; Fonds Wetenschappelijk Onderzoek; Agence Nationale de la Recherche","keywords":"Glycosylation; Phenotype; Biology; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01362110456262376,"gpt":0.2804165815286901,"spread":0.2667954769660663,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004757147,0.00004978783,0.00007285672,0.00007481393,0.00005090729,0.000007094865,0.000205551,0.00006004451,0.000004912367],"category_scores_gemma":[0.0001135061,0.000031019,0.00001641954,0.000514416,0.0001121709,0.0000185393,0.0000415798,0.0000560494,0.000002997296],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001126311,"about_ca_system_score_gemma":0.00005884408,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002198577,"about_ca_topic_score_gemma":0.000001065851,"domain_scores_codex":[0.9992715,0.000004728736,0.000153087,0.000162849,0.0003131012,0.00009474218],"domain_scores_gemma":[0.9996502,0.00001533597,0.0001330095,0.000006435975,0.0001767755,0.00001818948],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006669999,0.00006366317,0.09499811,0.00008087132,0.00001247021,1.823145e-9,0.0001926223,0.004453502,0.8522859,0.04754086,0.0001546859,0.000150667],"study_design_scores_gemma":[0.001770448,0.001190814,0.5938123,0.0007175516,0.00002563753,0.00001597755,0.001107014,0.001755973,0.3689862,0.02149502,0.008715995,0.0004070229],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.972746,0.00007182299,0.00001170616,0.001155708,0.00001026425,0.0002674208,0.000005750381,0.00000209734,0.02572927],"genre_scores_gemma":[0.9980969,0.000006547667,0.001277169,0.0002086505,0.00001699199,0.00000944724,5.319251e-7,0.000002863297,0.000380835],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4988142,"threshold_uncertainty_score":0.1264918,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2001966776","doi":"10.1074/jbc.m114.583823","title":"Cdx1 and Cdx2 Function as Tumor Suppressors","year":2014,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"","keywords":"Colorectal cancer; CDX2; Mouse model of colorectal and intestinal cancer; Biology; Cancer research; Wnt signaling pathway; Carcinogenesis; Microsatellite instability; Adenomatous polyposis coli; Transcription factor; Cancer; Germline mutation; Allele; Mutation; Genetics; Homeobox; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.00948877601313434,"gpt":0.243366556045734,"spread":0.2338777800325997,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003731019,0.0001133166,0.0001945294,0.00001264863,0.0000528278,0.00001431358,0.0001091283,0.0002319172,0.00005519645],"category_scores_gemma":[0.0002993732,0.00007270095,0.00008842166,0.00003462621,0.00009948537,0.000003071218,0.00004860429,0.000182058,0.000006278834],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008972714,"about_ca_system_score_gemma":0.00004078334,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001693801,"about_ca_topic_score_gemma":1.218402e-7,"domain_scores_codex":[0.9992255,0.0000621076,0.0002917844,0.0001653053,0.00009445943,0.0001608273],"domain_scores_gemma":[0.9993642,0.00002649892,0.0002354516,0.0001057313,0.0001068044,0.000161312],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002332838,0.00005177431,0.008272972,0.00004255271,0.00004558917,0.000008615137,0.000007247591,0.000007588145,0.9890866,0.00004681824,0.001093612,0.001103381],"study_design_scores_gemma":[0.001425097,0.002318888,0.02520525,0.00009914635,0.00004764343,0.001442161,0.0001639257,0.00001425706,0.8077526,0.0008607336,0.1603724,0.0002978577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914182,0.001094182,0.0002436474,0.0001647099,0.0001425529,0.00003651708,0.000002579955,0.000005183719,0.006892434],"genre_scores_gemma":[0.9983348,0.0002481273,0.00009619173,0.0002913253,0.0005572021,0.000001236191,0.00001027799,0.000006766693,0.0004541115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.181334,"threshold_uncertainty_score":0.2964659,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2027676796","doi":"10.1002/mnfr.201400569","title":"Dairy nutrients and their effect on inflammatory profile in molecular studies","year":2015,"lang":"en","type":"review","venue":"Molecular Nutrition & Food Research","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"","keywords":"Inflammation; Nutrient; Proinflammatory cytokine; Micronutrient; Vitamin D and neurology; Vitamin E; Chemistry; Vitamin; Adipose tissue; Food science; Biology; Biochemistry; Endocrinology; Immunology; Antioxidant","retraction":null,"screen_n_in":null,"score":{"opus":0.09282022754210997,"gpt":0.4280615040334493,"spread":0.3352412764913394,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002860958,0.0006322066,0.001423171,0.0008089796,0.0001612513,0.0000637329,0.0004131217,0.0009979123,0.000002592699],"category_scores_gemma":[0.0004653646,0.0004736952,0.0003303171,0.0006925562,0.0003468581,0.000006960993,0.0004612359,0.00114502,0.00006154228],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002522063,"about_ca_system_score_gemma":0.0005203212,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004538357,"about_ca_topic_score_gemma":0.000005322877,"domain_scores_codex":[0.993487,0.003164799,0.0007009493,0.001128214,0.0006956946,0.0008233559],"domain_scores_gemma":[0.9980717,0.0001374818,0.0001918255,0.0007696915,0.0005126378,0.0003166134],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001103337,0.002875611,0.00007350469,0.2263949,0.004067567,0.001730139,0.0005828856,0.00001081214,0.01767105,0.002382079,0.0149284,0.7281798],"study_design_scores_gemma":[0.002073563,0.006014532,0.000002788764,0.02145351,0.00007732025,0.00008422315,0.0001824404,0.000001398546,0.01083619,0.0003004174,0.9583811,0.000592493],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01286343,0.9813909,0.00001350594,0.00005413531,0.0001772251,0.004298275,0.0001053527,0.00002450641,0.001072647],"genre_scores_gemma":[0.006377372,0.9906696,0.00003230656,0.00003730399,0.0001667468,0.001788434,0.000627753,0.0001323607,0.000168117],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9434527,"threshold_uncertainty_score":0.9997715,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2138580291","doi":"10.1053/j.gastro.2005.12.032","title":"Bile Acids Induce Ectopic Expression of Intestinal Guanylyl Cyclase C Through Nuclear Factor-κB and Cdx2 in Human Esophageal Cells","year":2006,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health; Belgian American Educational Foundation","keywords":"CDX2; Ectopic expression; Soluble guanylyl cyclase; Chemistry; Guanylate cyclase 2C; GUCY2D; Guanylate cyclase; Cancer research; Internal medicine; Cell biology; Endocrinology; Biochemistry; Medicine; Biology; Transcription factor; Receptor; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.00810717480226379,"gpt":0.2452534134592315,"spread":0.2371462386569677,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008956708,0.0001565186,0.0002384082,0.00006384503,0.00005149536,0.000006684055,0.0001239794,0.0002077524,0.0000274459],"category_scores_gemma":[0.00001155399,0.0001383,0.00004729152,0.00004435259,0.0001578177,0.000006499927,0.0001249015,0.0001630145,0.000003450459],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001569483,"about_ca_system_score_gemma":0.00001990803,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000215834,"about_ca_topic_score_gemma":0.0001107053,"domain_scores_codex":[0.9987913,0.0001498823,0.0003381739,0.0003300658,0.00007175159,0.0003188245],"domain_scores_gemma":[0.9995635,0.000009218007,0.0001440479,0.0001959037,0.00003486882,0.00005245675],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001108999,0.0001147272,0.200711,0.00003955693,0.000007212813,0.00001616065,0.00008226418,0.00002704999,0.7985075,0.00006254403,0.0002674505,0.00005367547],"study_design_scores_gemma":[0.003043925,0.003207779,0.5207705,0.0001418037,0.00001631681,0.000143449,0.0001480448,0.00001807414,0.4706471,0.0002260803,0.001447886,0.0001889758],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987178,0.0001736656,0.0001934091,0.00005485924,0.0001234565,0.0001591276,0.00001832856,0.00001014098,0.0005492115],"genre_scores_gemma":[0.9990985,0.00002778942,0.0004792584,0.0001165239,0.0001015259,0.000006577076,0.00004295062,0.00001809153,0.0001087624],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3278604,"threshold_uncertainty_score":0.563971,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2082780252","doi":"10.4161/hv.28549","title":"Effects in the use of a genetically engineered strain of<i>Lactococcus lactis</i>delivering in situ IL-10 as a therapy to treat low-grade colon inflammation","year":2014,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Lactococcus lactis; Genetically engineered; Strain (injury); Genetically modified organism; In situ; Inflammation; Recombinant DNA; Microbiology; Medicine; Biology; Immunology; Bacteria; Chemistry; Internal medicine; Genetics; Lactic acid; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02128920782259308,"gpt":0.2771812836365809,"spread":0.2558920758139878,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003306117,0.0002021859,0.0002912955,0.0001353991,0.0000374995,0.00002151743,0.0002230283,0.000200488,0.000006409095],"category_scores_gemma":[0.00004499341,0.0001549587,0.00007878195,0.0002032794,0.00002790975,0.000008314129,0.00002808599,0.0001237321,0.00000308191],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002421081,"about_ca_system_score_gemma":0.00004654669,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001453642,"about_ca_topic_score_gemma":0.0002304591,"domain_scores_codex":[0.9986209,0.0002927158,0.0004796068,0.0002202675,0.000139703,0.0002468289],"domain_scores_gemma":[0.9992659,0.0001190041,0.000153978,0.0003423336,0.00008380602,0.000034984],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003433719,0.0001662403,0.001460459,0.0001275039,0.00004270279,0.000001931671,0.001057625,0.001446976,0.9882606,0.000297755,0.00001025661,0.006784604],"study_design_scores_gemma":[0.004809889,0.002432,0.2800191,0.000296662,0.00003361834,0.000007213815,0.00009714999,0.0002373192,0.7031983,0.0001053954,0.008422558,0.0003407396],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977074,0.0006131235,0.0004017656,0.00009139215,0.00004721103,0.0009844565,0.000006275977,0.000008446367,0.000139975],"genre_scores_gemma":[0.9991128,0.000268664,0.0001738063,0.0001884983,0.00006007544,0.00005857074,0.0000315256,0.00003076841,0.00007522688],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2850623,"threshold_uncertainty_score":0.6319032,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2790193431","doi":"10.1016/j.ijfoodmicro.2018.02.021","title":"Genetic and phenotypic analysis of carbohydrate metabolism and transport in Lactobacillus reuteri","year":2018,"lang":"en","type":"article","venue":"International Journal of Food Microbiology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Lactobacillus reuteri; Maltose; Raffinose; Biology; Biochemistry; Carbohydrate; Cellobiose; Glycoside hydrolase; Sucrose; Catabolite repression; Major facilitator superfamily; Lactose; Fermentation; Microbiology; Enzyme; Lactobacillus; Gene; Mutant; Cellulase","retraction":null,"screen_n_in":null,"score":{"opus":0.007330647085363677,"gpt":0.248763830375506,"spread":0.2414331832901423,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001759815,0.00007946802,0.000255091,0.0002903844,0.00001162147,0.000003869899,0.0001256842,0.0001188255,0.000008495063],"category_scores_gemma":[0.00001794703,0.00006430328,0.00006725993,0.0001021285,0.0001630306,0.000004033199,0.00003048865,0.00006761932,3.118946e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009682206,"about_ca_system_score_gemma":0.00005745661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003448869,"about_ca_topic_score_gemma":0.000285889,"domain_scores_codex":[0.9992709,0.00006410431,0.0003945505,0.0001303739,0.00004145461,0.0000986269],"domain_scores_gemma":[0.9993777,0.00001064565,0.0002483607,0.00006462536,0.0002577329,0.00004093601],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000219491,0.00003719548,0.0361469,0.000006857201,0.001469962,0.000009712477,0.0002390798,0.0000308292,0.9607859,0.000111273,0.00001356459,0.0009292766],"study_design_scores_gemma":[0.002479017,0.001742995,0.8576036,0.00007705084,0.0006154375,0.000594406,0.0001297741,0.00003508527,0.1284484,0.0002000735,0.00784373,0.000230374],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959079,0.003144212,0.0002922853,0.0001137992,0.0003336266,0.00004157471,0.00005692787,7.896699e-7,0.000108906],"genre_scores_gemma":[0.9986841,0.0007429137,0.0003020997,0.00009950826,0.000129545,5.715199e-7,0.00001745542,0.000004922957,0.00001886186],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8323374,"threshold_uncertainty_score":0.2622212,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3123079134","doi":"10.1038/s41467-020-20682-3","title":"Ancient proteins provide evidence of dairy consumption in eastern Africa","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Université de Genève; National Commission for Science, Technology and Innovation; Max-Planck-Gesellschaft","keywords":"Herding; Consumption (sociology); Homo sapiens; Pastoralism; Livestock; Biology; Geography; Adaptation (eye); Ecology","retraction":null,"screen_n_in":null,"score":{"opus":0.04718685115689398,"gpt":0.3417871366716273,"spread":0.2946002855147333,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002652718,0.00006617318,0.0001034144,0.0000387917,0.00005811969,0.0000073043,0.0003265066,0.0002443707,0.000004271719],"category_scores_gemma":[0.0004186572,0.00006087272,0.00004119114,0.0001699982,0.00008607475,0.000005060813,0.000229295,0.0003061419,0.000008085903],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002357384,"about_ca_system_score_gemma":0.0002329512,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001366461,"about_ca_topic_score_gemma":0.000543546,"domain_scores_codex":[0.9991594,0.0002432411,0.0002239732,0.0001630409,0.00009560273,0.0001147407],"domain_scores_gemma":[0.9986247,0.00005548251,0.0001060205,0.0009757886,0.000199532,0.00003851408],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000738216,0.0005815713,0.1628357,0.0003718746,0.00005388878,0.000004949818,0.000749029,0.00004656697,0.8272831,0.003839226,0.001836071,0.002324166],"study_design_scores_gemma":[0.001687546,0.000506322,0.3519213,0.00292197,0.00006460596,0.00007295923,0.0008654598,0.0005519987,0.241806,0.0001828201,0.3988163,0.0006026968],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8138703,0.1749938,0.0003542845,0.003140335,0.0001858884,0.0009139146,0.00002139779,0.0000170539,0.00650308],"genre_scores_gemma":[0.9947609,0.002738151,0.001822065,0.0001108083,0.0000167855,0.00005988469,0.00006119524,0.000006739966,0.0004234795],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5854772,"threshold_uncertainty_score":0.2482318,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2140778393","doi":"10.1158/1078-0432.ccr-05-1624","title":"The Putative Tumor Suppressor Cdx2 Is Overexpressed by Human Colorectal Adenocarcinomas","year":2005,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute","keywords":"CDX2; Immunohistochemistry; Carcinogenesis; Colorectal cancer; Biology; Cancer research; Transcription factor; Reverse transcription polymerase chain reaction; Intestinal mucosa; Endogeny; Epithelium; Tumor suppressor gene; Pathology; Messenger RNA; Cancer; Medicine; Homeobox; Internal medicine; Gene; Immunology; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.09412990076868448,"gpt":0.4991898561619032,"spread":0.4050599553932187,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002196151,0.0001579126,0.0002367843,0.00003092616,0.0006855186,0.00007755309,0.000546958,0.0002659267,0.0001770117],"category_scores_gemma":[0.0004380147,0.0001060437,0.0001530795,0.0001577307,0.0008679223,0.000006406038,0.0002116173,0.0007603472,0.0001151181],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007537356,"about_ca_system_score_gemma":0.0004397072,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002392302,"about_ca_topic_score_gemma":0.0001535495,"domain_scores_codex":[0.9967847,0.0008720863,0.0005407609,0.0006029852,0.0004958264,0.0007036432],"domain_scores_gemma":[0.998359,0.0004018172,0.0001190397,0.0004187173,0.0004048295,0.0002966287],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001030731,0.0003416878,0.01820544,0.00005191336,0.0002383079,0.00001108663,0.0002992729,0.0000115655,0.3045264,0.0003856756,0.671167,0.003730936],"study_design_scores_gemma":[0.001833549,0.001554961,0.02075913,0.00005578339,0.0000156696,0.000005857998,0.00031367,0.00005175369,0.2807688,0.0001822778,0.6941984,0.0002602419],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.97887,0.00731258,0.000009952654,0.004239531,0.0002258689,0.0006496669,0.0001831515,0.00001501768,0.008494169],"genre_scores_gemma":[0.9865206,0.0009866828,0.0000191802,0.0006263142,0.001014917,0.0002022337,0.0000565675,0.0000345002,0.01053894],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02375766,"threshold_uncertainty_score":0.5272524,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1761524747","doi":"10.3390/nu7085309","title":"Adaptation to Lactose in Lactase Non Persistent People: Effects on Intolerance and the Relationship between Dairy Food Consumption and Evalution of Diseases","year":2015,"lang":"en","type":"review","venue":"Nutrients","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Lactose; Lactase; Lactose intolerance; Context (archaeology); Food science; Prebiotic; Biology; Microbiome; Food intolerance; Medicine; Immunology; Bioinformatics; Allergy","retraction":null,"screen_n_in":null,"score":{"opus":0.06365104432743812,"gpt":0.3473867958072806,"spread":0.2837357514798425,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004096963,0.0001760667,0.0005170992,0.000107584,0.0000553815,0.00001123851,0.00006523808,0.0002450325,2.081984e-7],"category_scores_gemma":[0.0003510792,0.0001204452,0.0000852452,0.0001341717,0.00005783105,0.000004687649,0.00004545705,0.0001371259,0.000004019751],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005646597,"about_ca_system_score_gemma":0.0001088643,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001668609,"about_ca_topic_score_gemma":0.00001369534,"domain_scores_codex":[0.9986565,0.0004469316,0.0003195635,0.0002921755,0.0001621583,0.000122675],"domain_scores_gemma":[0.9991802,0.0002322899,0.000233639,0.0001810677,0.00006324583,0.0001095426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.00167886,0.0004160341,0.2664635,0.05830354,0.0004695927,0.000002993024,0.002452501,0.00005135328,0.0000126492,0.0005842172,0.0005507683,0.669014],"study_design_scores_gemma":[0.0157835,0.005204224,0.8105277,0.05289619,0.002732135,0.00002233858,0.0003452087,0.00007248984,0.00004246228,0.0002538899,0.1110501,0.001069752],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.2466806,0.7515008,0.00003026637,0.00002724551,0.00009528499,0.0015303,0.0001053817,0.000003198616,0.00002690929],"genre_scores_gemma":[0.600561,0.3989402,0.000007029609,0.00001185242,0.00004905426,0.00008170459,0.0003204009,0.00001050237,0.00001826501],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.6679443,"threshold_uncertainty_score":0.4911615,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2066812881","doi":"10.1007/s10620-008-0363-2","title":"Estimation of the Potential Antitumor Activity of Microencapsulated Lactobacillus acidophilus Yogurt Formulation in the Attenuation of Tumorigenesis in Apc(Min/+) Mice","year":2008,"lang":"en","type":"article","venue":"Digestive Diseases and Sciences","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Lactobacillus acidophilus; Probiotic; Oral administration; Medicine; Azoxymethane; Immune system; Carcinogenesis; Pharmacology; Biology; Internal medicine; Immunology; Cancer; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.01265812288516503,"gpt":0.2585320166522928,"spread":0.2458738937671277,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002487901,0.000078046,0.0001440692,0.0000687053,0.0001025626,0.000004879189,0.0001375958,0.00004804734,7.631061e-7],"category_scores_gemma":[0.0001174771,0.00004635662,0.00005084241,0.0003505845,0.0003751362,0.00002008523,0.00003199754,0.00003661936,1.130931e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009258626,"about_ca_system_score_gemma":0.0001457506,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003760119,"about_ca_topic_score_gemma":0.00002221426,"domain_scores_codex":[0.9991544,0.0001362877,0.0002334281,0.0001700092,0.0001938505,0.0001120088],"domain_scores_gemma":[0.9995326,0.00003314443,0.0002356561,0.0000989426,0.00007847208,0.00002114445],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001062277,0.0001669532,0.7933244,0.00006128326,0.000008331595,0.000001626267,0.0004614344,0.006151414,0.1986811,0.000118765,0.000004147676,0.0009143929],"study_design_scores_gemma":[0.0002671161,0.000141776,0.9578835,0.00006614786,0.00001320262,0.000007125238,0.0002509244,0.002498242,0.03875424,0.0000661739,0.000001548474,0.00004998434],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987729,0.0005771162,0.0001000691,0.00009437399,0.00005621713,0.000276272,0.0000458087,0.000001195214,0.00007611207],"genre_scores_gemma":[0.9997373,0.0001873331,0.00002431704,0.0000120415,0.00001073785,0.000005439097,0.00001388272,0.000002413827,0.000006504736],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1645592,"threshold_uncertainty_score":0.1890368,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2460890813","doi":"10.1186/s12937-016-0183-8","title":"Systematic review and meta-analysis of lactose digestion, its impact on intolerance and nutritional effects of dairy food restriction in inflammatory bowel diseases","year":2015,"lang":"en","type":"review","venue":"Nutrition Journal","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Medicine; Lactose intolerance; Inflammatory bowel disease; Lactose; Lactase; Food intolerance; Odds ratio; Disease; Meta-analysis; Internal medicine; Population; Gastroenterology; Environmental health; Food science; Immunology; Allergy","retraction":null,"screen_n_in":null,"score":{"opus":0.02689118754021838,"gpt":0.3393698772752156,"spread":0.3124786897349972,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007074549,0.0003179326,0.003164551,0.0005843135,0.00004826617,0.00002198302,0.0001067854,0.0003105534,0.000005156751],"category_scores_gemma":[0.0003567162,0.0002100748,0.0009644025,0.0004238071,0.000058359,0.00001652517,0.00002662723,0.0002810274,5.966279e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007220266,"about_ca_system_score_gemma":0.0002455385,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001528608,"about_ca_topic_score_gemma":0.000001219566,"domain_scores_codex":[0.9969372,0.001020033,0.001309398,0.0002785639,0.000302106,0.0001527661],"domain_scores_gemma":[0.9976131,0.0001519093,0.001422929,0.0002112433,0.0004010515,0.000199726],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.0000435984,0.0003720816,0.00006700039,0.9689644,0.02994895,0.00001081736,0.00001235541,0.000008407847,0.00001248409,0.00005061889,0.0002920524,0.0002172273],"study_design_scores_gemma":[0.001694761,0.002048565,0.001555252,0.3626176,0.6278554,0.0003538965,0.0000233687,0.000003964597,0.00003513989,0.0001221421,0.003145171,0.0005447881],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00132709,0.9965498,0.00001577993,0.00003437599,0.0000460116,0.001588746,0.0004247512,0.000003177891,0.00001022897],"genre_scores_gemma":[0.01169764,0.9877324,0.00001214099,0.00002597198,0.00005773708,0.0001740172,0.0002695536,0.00001865103,0.00001196326],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.6063468,"threshold_uncertainty_score":0.85666,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2082873137","doi":"10.1289/ehp.02110s5739","title":"Chromate-induced epimutations in mammalian cells.","year":2002,"lang":"en","type":"article","venue":"Environmental Health Perspectives","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of Environmental Health Sciences; National Cancer Institute; York University","keywords":"DNA methylation; Epigenetics; Biology; Methylation; Gene silencing; Molecular biology; Carcinogen; Transgene; Gene; Epigenetics of physical exercise; DNA; Reporter gene; Gene expression; Cancer research; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01314655539480421,"gpt":0.2632366448275302,"spread":0.250090089432726,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000133314,0.0001442283,0.0001532646,0.00006826583,0.0001507694,0.000008120976,0.00008933183,0.0001159194,0.0002489769],"category_scores_gemma":[0.000006216873,0.0001443432,0.00005196644,0.00007477783,0.00008050083,0.000006037874,0.00003717209,0.0001323036,0.0002368538],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000237902,"about_ca_system_score_gemma":0.00002911062,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001785365,"about_ca_topic_score_gemma":0.00008111762,"domain_scores_codex":[0.9987635,0.0001364916,0.0002455713,0.000383536,0.0001156955,0.0003551796],"domain_scores_gemma":[0.9995556,0.000007486561,0.00008374739,0.0001939192,0.000003671953,0.0001555544],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001366381,0.005443743,0.03622469,0.0003282601,0.0001476439,0.00009188495,0.04515231,0.000537425,0.8826652,0.001348346,0.01108703,0.01683682],"study_design_scores_gemma":[0.007507342,0.007301213,0.7430668,0.0002989587,0.00002633209,0.0002054515,0.0930517,0.0007446082,0.07700957,0.0002209009,0.06852697,0.002040107],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871642,0.005869305,0.00002556835,0.001208105,0.0001441101,0.0003993772,0.00003173489,0.00001547263,0.005142122],"genre_scores_gemma":[0.99599,0.001740956,0.0001653534,0.0002560053,0.00010291,0.00002897539,0.00003296767,0.00002384691,0.001658988],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8056557,"threshold_uncertainty_score":0.5886143,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2009009612","doi":"10.1016/j.ydbio.2012.01.010","title":"Cdx function is required for maintenance of intestinal identity in the adult","year":2012,"lang":"en","type":"article","venue":"Developmental Biology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"","keywords":"CDX2; Biology; Intestinal epithelium; Cecum; Epithelium; Cell biology; Gastrointestinal epithelium; Phenotype; Homeobox; Intestinal mucosa; Small intestine; Transcription factor; Internal medicine; Endocrinology; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01906140797822973,"gpt":0.2961588489099133,"spread":0.2770974409316835,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004133816,0.00008185057,0.0001060662,0.00003178463,0.00004468215,0.000002774076,0.0001248379,0.0001294597,0.000008679616],"category_scores_gemma":[0.0001060184,0.00005480872,0.00003960678,0.00009218272,0.00008235285,0.000006645878,0.00004218749,0.0000507133,0.00001222091],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002248096,"about_ca_system_score_gemma":0.0000590507,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004193108,"about_ca_topic_score_gemma":0.00006366275,"domain_scores_codex":[0.9992763,0.00006701326,0.0002287308,0.0001450797,0.00004121389,0.0002416938],"domain_scores_gemma":[0.9997051,0.00002125772,0.00009028764,0.00008278622,0.00007181653,0.00002876422],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004624049,0.0002217317,0.5212306,0.0001158118,0.00008073259,6.708102e-7,0.001295956,4.667239e-7,0.4504374,0.01535332,0.005843341,0.004957552],"study_design_scores_gemma":[0.00308071,0.00159362,0.7275425,0.0001700791,0.00003737082,0.0002173813,0.004938453,0.00001190288,0.165256,0.002292348,0.09431541,0.0005442105],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929917,0.0004277388,0.003325921,0.000214259,0.0003935424,0.0003190942,0.00002329577,0.000004012325,0.002300453],"genre_scores_gemma":[0.9976865,0.00005859143,0.001001929,0.0008172443,0.00008449151,0.0000501178,0.0001332209,0.000005624863,0.0001622843],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2851814,"threshold_uncertainty_score":0.2235035,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}