{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":750,"total_is_capped":false,"direct_labels_cover":2,"predictions_cover":750,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"b4915dcd597e","filters":{"topic":"Enzyme Production and Characterization"}},"results":[{"id":"W2150847291","doi":"10.2144/04375rv01","title":"Glutaraldehyde: Behavior in Aqueous Solution, Reaction with Proteins, and Application to Enzyme Crosslinking","year":2004,"lang":"en","type":"review","venue":"BioTechniques","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1787,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal","funders":"","keywords":"Glutaraldehyde; Reagent; Aqueous solution; Reactivity (psychology); Chemistry; Enzyme; Monomer; Immobilized enzyme; Enzyme catalysis; Combinatorial chemistry; Chemical engineering; Organic chemistry; Polymer","retraction":null,"screen_n_in":null,"score":{"opus":0.01401312803491977,"gpt":0.302312956292893,"spread":0.2882998282579732,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001564015,0.0002620558,0.0003390606,0.0001692103,0.00007126691,0.00004339422,0.0001098275,0.0005340687,0.0000010537],"category_scores_gemma":[0.00001958713,0.0002329644,0.000055047,0.0002213251,0.00004813638,0.000009086816,0.00006460361,0.0001985611,0.000004179457],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009787187,"about_ca_system_score_gemma":0.0001356189,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008506938,"about_ca_topic_score_gemma":0.00006841256,"domain_scores_codex":[0.9987833,0.00005232896,0.0003179508,0.0005761724,0.00009893844,0.0001712392],"domain_scores_gemma":[0.9993404,0.000001958266,0.0002029458,0.000336501,0.00006216556,0.00005605476],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003223313,0.00008332092,0.0000107856,0.001640442,0.00001501977,0.000002666064,0.00002039278,5.329031e-7,0.1883018,0.0000471063,0.00005355986,0.8097921],"study_design_scores_gemma":[0.00009798937,0.0002625541,0.0000635634,0.001890433,0.00007731615,0.0001104749,0.000002411722,8.011733e-7,0.05386887,0.00001165421,0.9432675,0.0003464028],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0009274511,0.9632387,0.03208028,0.000132513,0.00005426376,0.003370481,0.00002860879,0.0001425015,0.00002516724],"genre_scores_gemma":[0.003013537,0.9879608,0.006037565,0.00005409443,0.0002253002,0.001731053,0.0008106179,0.00005798911,0.0001090202],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9432139,"threshold_uncertainty_score":0.9500012,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2110958200","doi":"10.1016/s0167-4838(00)00302-2","title":"Relationship of sequence and structure to specificity in the α-amylase family of enzymes","year":2001,"lang":"en","type":"review","venue":"Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":653,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"","keywords":"Enzyme; Biochemistry; Peptide sequence; Amino acid; Active site; Sequence (biology); Glycoside hydrolase; Stereochemistry; Protein primary structure; Biology; Chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.02997059826838759,"gpt":0.3037901041012439,"spread":0.2738195058328563,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001985969,0.0005024497,0.0009205443,0.0002315889,0.00006301211,0.00002997829,0.000409506,0.0006522347,0.000007450507],"category_scores_gemma":[0.0001641233,0.0003809904,0.000169714,0.0005111938,0.0003326263,0.00001180339,0.000206951,0.0004400318,4.722774e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001520253,"about_ca_system_score_gemma":0.0001652339,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002852066,"about_ca_topic_score_gemma":0.00001525124,"domain_scores_codex":[0.9973996,0.0006204353,0.0006887083,0.0008000591,0.0002096715,0.0002815002],"domain_scores_gemma":[0.9984993,0.00004428988,0.000558787,0.0007060581,0.0001075343,0.0000840315],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006612684,0.00004183763,0.000005621355,0.001401601,0.00007946268,0.000008179235,0.0001592964,0.000001429059,0.9882837,0.001646922,0.00009735244,0.008208484],"study_design_scores_gemma":[0.0003991893,0.0005490686,0.0007313123,0.0006937103,0.0002875294,0.0002244089,0.00006959907,0.000001100502,0.927671,0.001041738,0.06770614,0.0006251859],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7607373,0.2370494,0.00009828039,0.0002950975,0.00007898771,0.001283234,0.0004105721,0.000008112779,0.00003897592],"genre_scores_gemma":[0.8008872,0.1969923,0.0007508967,0.0003034758,0.000145215,0.00005726211,0.0007794612,0.00005054602,0.00003362909],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06760878,"threshold_uncertainty_score":0.9998642,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2017186389","doi":"10.1016/j.ab.2006.01.036","title":"A quantitative starch–iodine method for measuring alpha-amylase and glucoamylase activities","year":2006,"lang":"en","type":"article","venue":"Analytical Biochemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":539,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Génome Québec; Genome Canada","keywords":"Acarbose; Chemistry; Enzyme; IC50; Amylase; Alpha-amylase; Starch; Lead compound; Alpha-glucosidase; In vitro; Biochemistry; Stereochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01860426120139817,"gpt":0.2968358335559887,"spread":0.2782315723545905,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000192939,0.0001609026,0.0001549116,0.00003201983,0.00009514354,0.00004260573,0.00007382593,0.0001277345,0.00002033289],"category_scores_gemma":[0.0001941503,0.0001595629,0.00008356448,0.00007520257,0.0001121673,0.000007589676,0.00005285249,0.00007296604,0.000001719767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001661312,"about_ca_system_score_gemma":0.00004684822,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001650624,"about_ca_topic_score_gemma":0.00000662432,"domain_scores_codex":[0.9990225,0.00002946274,0.0001945815,0.0004315631,0.0001085404,0.0002132881],"domain_scores_gemma":[0.999512,0.00003992276,0.00006745444,0.0001992331,0.00009644563,0.00008499959],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003148198,0.00007546783,0.0002564755,0.00007554267,0.00004934565,0.000001247587,0.000009793294,0.00001155847,0.9965415,0.0005669097,0.001357867,0.0007394531],"study_design_scores_gemma":[0.0005340982,0.0001749922,0.0002167875,0.00001172587,0.0000482434,0.00001482834,0.0001051189,0.001589208,0.9902227,0.0002196031,0.006656404,0.0002062924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9583697,0.0004166442,0.03966247,0.0006785466,0.00004407131,0.0001358303,0.00009076576,0.00002401618,0.0005779563],"genre_scores_gemma":[0.9862993,0.00004735103,0.01050299,0.0001622938,0.000354453,0.0000326078,0.0004991029,0.00002093838,0.002081015],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02915948,"threshold_uncertainty_score":0.6506788,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2116322723","doi":"10.1186/1471-2148-12-186","title":"Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)","year":2012,"lang":"en","type":"article","venue":"BMC Evolutionary Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":499,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Vetenskapsrådet; Stiftelsen för Strategisk Forskning; Agence Nationale de la Recherche; Svenska Forskningsrådet Formas; Strong; University of British Columbia; Aix-Marseille Université","keywords":"Subfamily; Biology; Context (archaeology); Glycoside hydrolase; Phylogenetic tree; Genetics; Computational biology; Evolutionary biology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02448416547582668,"gpt":0.2533014676666743,"spread":0.2288173021908476,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002489487,0.0001466444,0.0001460436,0.00007815169,0.00009664183,0.000004576302,0.00009608351,0.0002196647,0.00002068539],"category_scores_gemma":[0.00009358524,0.0001470387,0.00005614983,0.0001289332,0.0002409085,0.00001980723,0.00005963021,0.00007563282,0.00001903712],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003236683,"about_ca_system_score_gemma":0.00007909703,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002062968,"about_ca_topic_score_gemma":0.000009355873,"domain_scores_codex":[0.9988644,0.0001681331,0.0003164144,0.0003233441,0.00007426306,0.0002534595],"domain_scores_gemma":[0.9992827,0.00001768718,0.0001796064,0.0002787424,0.0001467442,0.00009453938],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008974258,0.00008162939,0.3454675,0.00001343089,0.00001093295,4.244734e-8,0.00001226702,0.00000874269,0.6484696,0.005164952,0.0005899439,0.00009116064],"study_design_scores_gemma":[0.0003175363,0.0001262159,0.9487619,0.000004944028,0.00001579391,0.00002746848,0.00009885733,0.000182135,0.04031527,0.0003610936,0.009626901,0.000161872],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.981074,0.003794648,0.01377356,0.00008796324,0.0004010429,0.000162035,0.00005907463,0.00002317745,0.0006244469],"genre_scores_gemma":[0.9969273,0.0002997694,0.00118767,0.0000679614,0.0005705971,0.00002138037,0.0006915795,0.00001400158,0.0002197855],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6081544,"threshold_uncertainty_score":0.5996063,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2165759219","doi":"10.1101/gr.112169.110","title":"Comparative genomics of citric-acid-producing<i>Aspergillus niger</i>ATCC 1015 versus enzyme-producing CBS 513.88","year":2011,"lang":"en","type":"article","venue":"Genome Research","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":367,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Concordia University","funders":"Lawrence Berkeley National Laboratory; Biomass Program; Los Alamos National Laboratory; Biological and Environmental Research; Office of Science; Lawrence Livermore National Laboratory; U.S. Department of Energy","keywords":"Biology; Genetics; Aspergillus niger; Genome; Gene; Transcriptome; Reference genome; Whole genome sequencing; Single-nucleotide polymorphism; Genotype; Biochemistry; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.1493636227696736,"gpt":0.3502610496640595,"spread":0.2008974268943859,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001311857,0.0002234828,0.0003158416,0.0002566735,0.0002390993,0.00003394965,0.000466783,0.0001812027,0.0002712663],"category_scores_gemma":[0.0002761549,0.0002298347,0.0001027994,0.0005904482,0.0002808567,0.00001680407,0.0003527796,0.0003261207,0.0001266302],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009473341,"about_ca_system_score_gemma":0.0002738907,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000953139,"about_ca_topic_score_gemma":0.00003187939,"domain_scores_codex":[0.997368,0.0002956138,0.0004301686,0.000879221,0.0004369826,0.0005899877],"domain_scores_gemma":[0.9978448,0.00002137581,0.0001575962,0.000983808,0.0008226647,0.0001697576],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007398148,0.0001476049,0.0004621128,0.00005390327,0.0001082911,0.000003175568,0.003104286,0.00003826789,0.9940287,0.00006940807,0.0007242946,0.0005200878],"study_design_scores_gemma":[0.000701608,0.0006211366,0.004936676,0.000009501099,0.00001408635,0.000009258455,0.0008247859,0.00002214453,0.9682785,0.00004585459,0.02428484,0.0002516611],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911814,0.002051134,0.0005687326,0.0001356252,0.0004592035,0.0004674453,0.0000441611,0.00002550996,0.005066748],"genre_scores_gemma":[0.9946818,0.0007388888,0.001377514,0.00003617061,0.0007742501,0.00004156155,0.0002812568,0.00004338536,0.002025137],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02575031,"threshold_uncertainty_score":0.9372388,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2082012892","doi":"10.1016/j.jmb.2007.10.069","title":"Human Intestinal Maltase–Glucoamylase: Crystal Structure of the N-Terminal Catalytic Subunit and Basis of Inhibition and Substrate Specificity","year":2007,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":345,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"National Center for Research Resources; Division of Materials Research; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health; National Science Foundation","keywords":"Protein subunit; Glycosyl; Hydrolase; Chemistry; Biochemistry; Active site; Maltose; Acarbose; Enzyme; Stereochemistry; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.007758349868521121,"gpt":0.2513089400959106,"spread":0.2435505902273895,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002417278,0.00009452015,0.0001559533,0.00007352276,0.00003888155,0.000005727234,0.0000748653,0.0001137735,0.00001002406],"category_scores_gemma":[0.00007659363,0.00007092879,0.00005658464,0.00007797446,0.0002536911,0.000005725903,0.00005684984,0.0001284158,4.356658e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006432066,"about_ca_system_score_gemma":0.00003381223,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006890294,"about_ca_topic_score_gemma":0.00001953658,"domain_scores_codex":[0.9992496,0.00007692745,0.0003709478,0.0001256208,0.00007628502,0.0001005545],"domain_scores_gemma":[0.9991673,0.000007574376,0.0004603289,0.0001208957,0.0001973612,0.00004660382],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000103882,0.00003072761,0.01144879,0.00003423746,0.0000286217,0.00001007451,0.00002709444,0.000004060718,0.9876074,0.0001727838,0.00001606506,0.0005163144],"study_design_scores_gemma":[0.0003713764,0.0004141299,0.06522408,0.00002716689,0.00002995907,0.001073747,0.00005976343,0.000001662959,0.9323998,0.0002095137,0.0001269007,0.00006189317],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976261,0.0003609449,0.001735676,0.0000907972,0.00007470609,0.00005896751,0.00002747001,9.704115e-7,0.00002441516],"genre_scores_gemma":[0.9994247,0.00004077602,0.0003281232,0.00005041064,0.0001004325,1.504916e-7,0.00003707052,0.000007012544,0.00001131145],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05520755,"threshold_uncertainty_score":0.2892392,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2031345106","doi":"10.1007/s00425-007-0668-y","title":"Physiological roles of plant glycoside hydrolases","year":2007,"lang":"en","type":"review","venue":"Planta","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":335,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Glycoside hydrolase; Biology; Glycoside; Biochemistry; Enzyme; Metabolism; Genome; Glycan; Cell wall; Arabidopsis; Gene; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.05149290112183526,"gpt":0.3147097137467912,"spread":0.263216812624956,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009416266,0.000192433,0.0005041999,0.00005566764,0.00002404223,0.000006305819,0.0001600853,0.0002842162,0.0000278894],"category_scores_gemma":[0.00004148061,0.0001449753,0.0001783507,0.00005942299,0.0000406085,0.000001304847,0.00006845579,0.0001037767,0.00002135483],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005844279,"about_ca_system_score_gemma":0.00004561633,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000178937,"about_ca_topic_score_gemma":0.000004206802,"domain_scores_codex":[0.9991032,0.00005467123,0.0003227048,0.0002969909,0.00008424606,0.0001381498],"domain_scores_gemma":[0.9994472,0.00001373464,0.0002355743,0.0002411985,0.00002237295,0.00003987429],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002045032,0.0004018104,0.00003194993,0.01198345,0.0005174351,0.00002884999,0.00002569915,0.00000420602,0.1055,0.0001954502,0.02327233,0.8578343],"study_design_scores_gemma":[0.00006086813,0.00007970431,0.000008321003,0.0006719243,0.00008674228,0.00009022315,0.000002848362,7.310664e-7,0.01191057,0.000002695949,0.9869267,0.0001586246],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0008603696,0.9979039,0.00004643567,0.00000427243,0.0001566652,0.0001673682,0.0005581724,0.00001255864,0.0002903021],"genre_scores_gemma":[0.0002852284,0.9915714,0.00004342561,0.00003933825,0.0004633122,0.0000121701,0.007304612,0.00001814904,0.0002623978],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9636544,"threshold_uncertainty_score":0.5911922,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1635612609","doi":"10.1007/978-0-387-79058-9","title":"Prebiotics and Probiotics Science and Technology","year":2009,"lang":"en","type":"book","venue":"","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":324,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Tufts University School of Medicine; University of Illinois at Urbana-Champaign; Directorate for Biological Sciences; Universidade de Vigo; Institut National de la Recherche Agronomique; Vrije Universiteit Brussel; Kela; Turun Yliopisto; Centre National de la Recherche Scientifique; North Carolina State University; University of Reading; University of Memphis; Lawson Health Research Institute; Teagasc; Indian National Science Academy; Helsingin ja Uudenmaan Sairaanhoitopiiri; University of Otago; Agriculture and Agri-Food Canada; University of Washington; Department for Environment, Food and Rural Affairs, UK Government","keywords":"Biology; Food science","retraction":null,"screen_n_in":null,"score":{"opus":0.00417130463306278,"gpt":0.2094043223445554,"spread":0.2052330177114926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001201281,0.0001331494,0.0001037495,0.0001321427,0.00008474467,0.00004190327,0.0001004836,0.0003293055,0.000004784261],"category_scores_gemma":[0.00009041059,0.0001246669,0.000008469447,0.00009045516,0.0005286026,0.000002928656,0.0001388367,0.0001060753,0.000002449783],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001720835,"about_ca_system_score_gemma":0.0002957814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":1.042096e-7,"about_ca_topic_score_gemma":0.000001802075,"domain_scores_codex":[0.9992437,0.00000446558,0.0001104339,0.0004120339,0.0001016846,0.0001276599],"domain_scores_gemma":[0.999397,0.000001240907,0.00006587723,0.0002305664,0.0002550135,0.00005034538],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001754143,0.00004089042,0.0001414262,0.0001126629,0.00002883489,0.000001653162,0.00002203964,5.632831e-7,0.9062067,0.01749959,0.04696154,0.02896662],"study_design_scores_gemma":[0.0001753452,0.000401662,0.0001390373,0.00003215761,0.00002755796,0.00009615251,0.00001107895,0.00001605946,0.2319401,0.001335495,0.7655193,0.000306034],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.0514214,0.008975998,0.001524424,0.01140506,0.0008642555,0.002284027,0.00005195029,0.000338428,0.9231344],"genre_scores_gemma":[0.01778734,0.002458478,0.002568494,0.000636733,0.0003556468,0.000002586819,0.0001552193,0.00002905662,0.9760064],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.7185578,"threshold_uncertainty_score":0.5083768,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2061953031","doi":"10.1016/j.biocel.2007.03.018","title":"Lytic transglycosylases: Bacterial space-making autolysins","year":2007,"lang":"en","type":"review","venue":"The International Journal of Biochemistry & Cell Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":296,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Lytic cycle; Peptidoglycan; Biochemistry; Bacterial cell structure; Cell envelope; Caulobacter crescentus; Cell wall; Biology; FtsZ; Flagellum; Muramidase; Lysin; Cell division; Bacteria; Bacteriophage; Microbiology; Enzyme; Escherichia coli; Genetics; Cell; Gene; Cell cycle","retraction":null,"screen_n_in":null,"score":{"opus":0.02769890704692188,"gpt":0.3385937088069438,"spread":0.3108948017600219,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005773815,0.0003704205,0.0006386178,0.0001424481,0.00006434247,0.00006928786,0.001257031,0.0005554293,0.0001656025],"category_scores_gemma":[0.0001689526,0.0002582166,0.0006546518,0.000120375,0.0001748739,0.000007298996,0.0001604489,0.0004500166,0.0000191476],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000103879,"about_ca_system_score_gemma":0.0005589562,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001698208,"about_ca_topic_score_gemma":0.000001233412,"domain_scores_codex":[0.9980386,0.0001288343,0.0009626308,0.0003610255,0.0002531624,0.0002557808],"domain_scores_gemma":[0.9977683,0.00006384187,0.001329356,0.0003629597,0.0003964156,0.00007906949],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002885029,0.00017595,0.000004713951,0.0007887462,0.0008815583,0.00003283545,0.00003918491,0.00000484666,0.7175679,0.00004101116,0.002383054,0.2777917],"study_design_scores_gemma":[0.0002817867,0.0001051855,5.440194e-7,0.0005545522,0.0002423179,0.0005912235,0.00002006593,0.000001224217,0.1607841,0.00001485288,0.8371871,0.000217075],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.006092648,0.9878014,0.001060372,0.0002988742,0.003327882,0.0001945232,0.0001320558,0.0000117048,0.001080586],"genre_scores_gemma":[0.01297332,0.978649,0.0002790947,0.0001735874,0.006154656,0.000006443464,0.0008868988,0.00004899886,0.0008280101],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8348041,"threshold_uncertainty_score":0.999987,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2008531998","doi":"10.1021/bi9921182","title":"Subsite Mapping of the Human Pancreatic α-Amylase Active Site through Structural, Kinetic, and Mutagenesis Techniques<sup>,</sup>","year":2000,"lang":"en","type":"article","venue":"Biochemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":261,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Chemistry; Stereochemistry; Glycosidic bond; Active site; Binding site; Cleavage (geology); Aglycone; Moiety; Residue (chemistry); Hydrolase; Catalysis; Enzyme; Biochemistry; Glycoside","retraction":null,"screen_n_in":null,"score":{"opus":0.007570563476128325,"gpt":0.2302660456223209,"spread":0.2226954821461926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004825546,0.0001675997,0.0001373812,0.00001342719,0.0001295206,0.00001882817,0.0001444616,0.0001623427,0.0001821884],"category_scores_gemma":[0.00002617531,0.0001395017,0.00007037928,0.0001134759,0.0001581373,0.000007662372,0.00006971064,0.00008256659,0.000002241864],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001330648,"about_ca_system_score_gemma":0.00002453568,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002317376,"about_ca_topic_score_gemma":9.605908e-7,"domain_scores_codex":[0.9991491,0.0000369644,0.0002066492,0.0003462564,0.000108429,0.0001526147],"domain_scores_gemma":[0.9993627,0.000004264803,0.0001067092,0.0004228458,0.00006232873,0.00004115327],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002464985,0.00001451603,0.002409104,0.00006962041,0.0000294551,5.160217e-7,0.0001531842,0.000007909618,0.9946568,0.000005287952,0.0001967176,0.002432222],"study_design_scores_gemma":[0.0001929084,0.00002743418,0.008622894,0.0000367302,0.00002780532,0.00002855581,0.00009303691,0.00002678591,0.9852632,0.00002400159,0.005495692,0.0001609852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983014,0.0002928555,0.00003114579,0.0001524755,0.00001762298,0.0001557126,0.00005530005,0.00002242194,0.0009710703],"genre_scores_gemma":[0.9964662,0.0002247746,0.0003828856,0.0001462305,0.0002531696,0.00001609776,0.0002130632,0.00001986947,0.00227771],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009393646,"threshold_uncertainty_score":0.5688713,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2558524714","doi":"10.1038/ja.2016.138","title":"Bacterial proteases, untapped antimicrobial drug targets","year":2016,"lang":"en","type":"review","venue":"The Journal of Antibiotics","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":246,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Proteases; Protease; Antimicrobial; Secretion; Virulence; Biology; Antibiotics; Antimicrobial peptides; Microbiology; Enzyme; Biochemistry; Drug development; Drug discovery; Chemistry; Drug; Pharmacology","retraction":null,"screen_n_in":null,"score":{"opus":0.01415087124506959,"gpt":0.2774340540625735,"spread":0.2632831828175039,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004244038,0.0002519195,0.0005696074,0.00007135758,0.00008255738,0.00003522669,0.0004108034,0.0002092516,0.00004643112],"category_scores_gemma":[0.0001031216,0.0001348974,0.0003208742,0.00008126211,0.0000944808,0.000006912753,0.0001022655,0.0002317407,0.00003013455],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002150458,"about_ca_system_score_gemma":0.0003168853,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":7.224591e-7,"about_ca_topic_score_gemma":9.525193e-7,"domain_scores_codex":[0.9985825,0.0003048399,0.0006364982,0.0001490783,0.0001469121,0.0001801154],"domain_scores_gemma":[0.9983038,0.00001620372,0.001102985,0.0003227066,0.0001908831,0.00006345831],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004542984,0.0003430135,0.00001032885,0.005676011,0.001064852,0.00002025309,0.00008154906,0.000002024406,0.4672657,0.00003633368,0.1147618,0.4102839],"study_design_scores_gemma":[0.0002170547,0.00009871316,0.000002276736,0.002156441,0.0003110493,0.0004144213,0.000004014877,8.703729e-8,0.05751049,0.000002762053,0.9391114,0.0001713578],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001607161,0.9948984,0.000488637,0.0002741445,0.002165021,0.0004027514,0.00009339011,0.000006293928,0.0000641931],"genre_scores_gemma":[0.0007958266,0.9941094,0.0001545556,0.00005995201,0.003779933,3.599937e-8,0.0001198585,0.00004598353,0.0009344387],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8243496,"threshold_uncertainty_score":0.5500957,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2229013467","doi":"10.1128/aem.03453-15","title":"Dividing the Large Glycoside Hydrolase Family 43 into Subfamilies: a Motivation for Detailed Enzyme Characterization","year":2016,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":236,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Genome British Columbia; University of British Columbia","funders":"Agence Nationale de la Recherche","keywords":"Glycoside hydrolase; Enzyme; Biology; Hydrolase; Glycoside; Computational biology; Biochemistry; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.005353994829364362,"gpt":0.1810433152485351,"spread":0.1756893204191708,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001204228,0.000142226,0.0001042428,0.00002395268,0.0001937581,0.00001231405,0.00008198808,0.0001284551,0.00001708071],"category_scores_gemma":[0.00001649639,0.00009317042,0.00003698936,0.00002505782,0.0001159084,0.000008847145,0.00008817707,0.00003525753,0.00001245742],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000021222,"about_ca_system_score_gemma":0.000006808826,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":8.743954e-7,"about_ca_topic_score_gemma":0.000002767684,"domain_scores_codex":[0.9992254,0.00003373898,0.0001737753,0.0003485503,0.00002509572,0.0001933742],"domain_scores_gemma":[0.9996765,0.00002274362,0.00009323329,0.000169521,0.0000056084,0.00003235562],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008731387,0.00003926851,0.002685561,0.000007076575,0.00002336593,6.949433e-8,0.00008320087,6.835167e-7,0.9943976,0.0001452506,0.0001277689,0.002402773],"study_design_scores_gemma":[0.0009550158,0.0001000311,0.01435974,0.00000527498,0.00001662263,0.000008941651,0.0001516381,0.00001040795,0.8973631,0.00008205849,0.08678768,0.0001595364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9750314,0.0001319707,0.02377947,0.0004096523,0.0001075302,0.0003607242,0.0001482503,0.00001337242,0.00001766338],"genre_scores_gemma":[0.9957439,0.0004328594,0.00009110246,0.0008361535,0.000189884,0.0001200186,0.002288265,0.00002042116,0.0002773759],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09703462,"threshold_uncertainty_score":0.3799379,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2806303726","doi":"10.1093/glycob/cwx089","title":"Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes","year":2017,"lang":"en","type":"article","venue":"Glycobiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":217,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Goddard Space Flight Center; University of the Ryukyus; Natural Sciences and Engineering Research Council of Canada; Norges Miljø- og Biovitenskapelige Universitet; Oulun Yliopisto; Hokkaido University; Universidad de Zaragoza; Danmarks Tekniske Universitet; Centre National de la Recherche Scientifique; Nuclear Physics; University of Waterloo; Sveriges Lantbruksuniversitet; RIKEN; Tokyo University of Agriculture; Simon Fraser University; University of Lethbridge; KU Leuven; Aalto-Yliopisto; University of St Andrews; Universiteit Utrecht; Rijksuniversiteit Groningen; University of Leeds; Wilfrid Laurier University; Slovenská Akadémia Vied; Kungliga Tekniska Högskolan; Pennsylvania State University; Weizmann Institute of Science; Itä-Suomen Yliopisto; Biotechnology and Biological Sciences Research Council; Institut National de la Recherche Agronomique; Université de Sherbrooke; National Institute of Advanced Industrial Science and Technology; Iowa State University; Queen Mary University of London; Newcastle University; Kindai University; Universiteit Gent; University of Pennsylvania; Tokyo University of Agriculture and Technology; Kagoshima University; Akita Prefectural University; U.S. Department of Agriculture","keywords":"Encyclopedia; Carbohydrate; Enzyme; Chemistry; Biochemistry; Library science; Computer science","retraction":null,"screen_n_in":null,"score":{"opus":0.007606905816401456,"gpt":0.2427554763441995,"spread":0.2351485705277981,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008208537,0.00007388592,0.0001514663,0.00003344436,0.00004482286,0.000004245658,0.0001836762,0.0001411212,0.000032361],"category_scores_gemma":[0.0003430156,0.00007518754,0.00004954767,0.00002296428,0.0001701069,0.000005277951,0.0001187049,0.00004880655,0.000003944878],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003945633,"about_ca_system_score_gemma":0.00004569577,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007058943,"about_ca_topic_score_gemma":0.00003420282,"domain_scores_codex":[0.9994435,0.00004261756,0.0001665135,0.0001960421,0.00003668292,0.0001146806],"domain_scores_gemma":[0.9992303,0.00001235747,0.0002627415,0.0003800509,0.00008856966,0.00002596427],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005450911,0.00003909311,0.01895761,0.00001468878,0.00004371125,8.490766e-7,0.0001485718,0.000002787726,0.9760638,0.0001726169,0.0002894057,0.004212341],"study_design_scores_gemma":[0.0002594606,0.0002924926,0.2670308,0.00001708775,0.00002497444,0.000008169876,0.00008921138,0.000004951864,0.7097451,0.000047833,0.02233656,0.0001432934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960852,0.0001788052,0.00006684988,0.00006833107,0.0004655125,0.00007445928,0.00003703732,0.00000496177,0.003018807],"genre_scores_gemma":[0.9984912,0.0004544528,0.0001216262,0.00002739269,0.0002636187,0.000007628573,0.00006419848,0.000009198049,0.0005606762],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2663187,"threshold_uncertainty_score":0.3066059,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2972315562","doi":"10.1074/jbc.ra119.010619","title":"A subfamily roadmap of the evolutionarily diverse glycoside hydrolase family 16 (GH16)","year":2019,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":209,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Michael Smith Health Research BC; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Agence Nationale de la Recherche; European Commission; Genome Canada; Ontario Genomics; Horizon 2020 Framework Programme; Genome British Columbia; Western Canada Research Grid; Novo Nordisk Fonden; Compute Canada","keywords":"Subfamily; Biology; Glycoside hydrolase; Sequence alignment; Phylogenetic tree; Computational biology; Structural similarity; Function (biology); Genetics; Evolutionary biology; Peptide sequence; Gene; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.0120852721770193,"gpt":0.2191887727471041,"spread":0.2071035005700848,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002055119,0.0001157668,0.0001788675,0.00001314204,0.00003875653,0.000008020321,0.0002882162,0.0002029266,0.0001187588],"category_scores_gemma":[0.0001880208,0.00007154739,0.000219646,0.00009125025,0.0001059327,0.000006698082,0.0001167919,0.000178679,0.000007093578],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002986253,"about_ca_system_score_gemma":0.00008398788,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002408579,"about_ca_topic_score_gemma":2.522855e-7,"domain_scores_codex":[0.9991143,0.0000525189,0.0003593696,0.0001712149,0.0001720493,0.0001305317],"domain_scores_gemma":[0.9990578,0.00001240939,0.0004164353,0.0002424699,0.0002068746,0.00006397378],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001910755,0.00008414268,0.02369437,0.00001835807,0.00003450357,0.000001108658,0.000007476835,0.0000393402,0.9743807,0.00000768373,0.001349485,0.0001918066],"study_design_scores_gemma":[0.0005674931,0.0001827307,0.0438333,0.00002658922,0.00001618659,0.00008083274,0.0001283761,0.00000943577,0.9377559,0.00006680625,0.0172268,0.0001055365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975459,0.0005803024,0.0001067421,0.0002302252,0.0002871909,0.00006666406,0.00001580815,0.000003788911,0.001163355],"genre_scores_gemma":[0.9981622,0.0002300717,0.00008388232,0.0002774939,0.0003537635,0.00000122598,0.00002490872,0.000006458213,0.0008599655],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03662473,"threshold_uncertainty_score":0.2917618,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1975770902","doi":"10.1021/bi701652t","title":"Alternative Catalytic Anions Differentially Modulate Human α-Amylase Activity and Specificity<sup>,</sup>","year":2008,"lang":"en","type":"article","venue":"Biochemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":205,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Chemistry; Allosteric regulation; Chloride; Catalysis; Binding site; Active site; Enzyme kinetics; Stereochemistry; Enzyme; Biochemistry; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01522710030924991,"gpt":0.2399042161948327,"spread":0.2246771158855828,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004427777,0.0001874921,0.0001317892,0.00002644366,0.0002139565,0.00002488612,0.0001228113,0.0001454636,0.00003897681],"category_scores_gemma":[0.00003683544,0.0001963712,0.00006006125,0.00006113157,0.0001621198,0.000008153184,0.0001119482,0.0001118217,0.000007914586],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002080741,"about_ca_system_score_gemma":0.00003914809,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002866646,"about_ca_topic_score_gemma":0.000002762705,"domain_scores_codex":[0.9990376,0.00002587295,0.0001470897,0.000482023,0.0001211077,0.0001863674],"domain_scores_gemma":[0.9993675,0.000003669186,0.00008529604,0.0003553477,0.00007234906,0.0001158014],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003438714,0.0001123637,0.001189169,0.00002450319,0.00003858792,0.000005737652,0.00006883433,0.0000327672,0.9977101,0.00001644307,0.0004647631,0.0003023367],"study_design_scores_gemma":[0.0003838783,0.0000499206,0.007877522,0.000009150542,0.00001414259,0.00007630324,0.00002520571,0.0003636386,0.9900521,0.00002300674,0.0008991513,0.0002259974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982225,0.0001087068,0.0007318592,0.0001065764,0.00006289236,0.00009690354,0.00006634851,0.00002891011,0.0005752969],"genre_scores_gemma":[0.9953583,0.0002142933,0.00007614757,0.00005336332,0.0005908572,0.00001122476,0.000559637,0.00002306536,0.003113073],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007658024,"threshold_uncertainty_score":0.8007784,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W984086547","doi":"10.1038/nchembio.1865","title":"The amylase inhibitor montbretin A reveals a new glycosidase inhibition motif","year":2015,"lang":"en","type":"article","venue":"Nature Chemical Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":186,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre for Drug Research and Development; Genome British Columbia; University of British Columbia","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research","keywords":"Glycoside hydrolase; Chemistry; Biochemistry; Caffeic acid; Myricetin; Stereochemistry; Active site; Enzyme; Flavonoid","retraction":null,"screen_n_in":null,"score":{"opus":0.009175746296063849,"gpt":0.2587806034353358,"spread":0.2496048571392719,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002039465,0.0001497162,0.0001183734,0.00002187326,0.00006246298,0.00002570479,0.0001385645,0.0006405088,0.00001154206],"category_scores_gemma":[0.0009050092,0.0001067199,0.00006704657,0.0001161897,0.000115077,0.000004688003,0.0001076207,0.0003381219,0.0000310212],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002766877,"about_ca_system_score_gemma":0.00008413222,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004817772,"about_ca_topic_score_gemma":0.000004513757,"domain_scores_codex":[0.9990105,0.00008123126,0.0002115804,0.0003754466,0.00008794451,0.0002332689],"domain_scores_gemma":[0.9992468,0.00001855623,0.00009659091,0.0002941588,0.0001576299,0.0001862866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000203842,0.00002894952,0.0002204407,0.00000320474,0.00001266941,0.000001004653,0.00001641821,4.091282e-7,0.9454197,0.0005457553,0.05089171,0.002655881],"study_design_scores_gemma":[0.0005464675,0.0001036702,0.00006773415,0.000005887349,0.000007304554,0.00002607082,0.00001878574,0.000004429568,0.8147681,0.001656027,0.182673,0.0001224675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910267,0.001964196,0.0003082067,0.005387555,0.0005867913,0.0001804261,0.00002046066,0.00003769723,0.0004879641],"genre_scores_gemma":[0.9946222,0.0000933358,0.0002966081,0.001469753,0.001740745,0.00001900008,0.0007336512,0.00001642383,0.001008246],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1317813,"threshold_uncertainty_score":0.494019,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2133800844","doi":"10.1128/aem.67.4.1529-1535.2001","title":"Cold-Adapted β-Galactosidase from the Antarctic Psychrophile <i>Pseudoalteromonas haloplanktis</i>","year":2001,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":185,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Fonds De La Recherche Scientifique - FNRS; Polar Knowledge Canada","keywords":"Psychrophile; Biochemistry; Biology; Lactose; Enzyme; Homotetramer; Escherichia coli; Pseudoalteromonas; Amino acid; Kluyveromyces; Kluyveromyces marxianus; Peptide sequence; Glycoside hydrolase; Protein subunit; Yeast; Saccharomyces cerevisiae; 16S ribosomal RNA","retraction":null,"screen_n_in":null,"score":{"opus":0.004547906975002521,"gpt":0.1746742942870516,"spread":0.1701263873120491,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004247886,0.0001420763,0.0001012524,0.00001022706,0.0001318633,0.00001377424,0.00009867353,0.0001160137,0.0001551746],"category_scores_gemma":[0.000002098185,0.000111437,0.0000279774,0.0000268385,0.0001800487,0.000003158156,0.00008761451,0.00008179224,0.00005187472],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008907522,"about_ca_system_score_gemma":0.000005446625,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002296225,"about_ca_topic_score_gemma":0.00001326809,"domain_scores_codex":[0.9992836,0.00003320332,0.0001333786,0.0003550922,0.00002573355,0.0001690287],"domain_scores_gemma":[0.9996595,0.000009890964,0.00005539468,0.0002276826,0.000002314423,0.00004522984],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006902325,0.00005568901,0.007296665,0.00000137431,0.0000291071,0.000001566908,0.00003916728,0.000001679719,0.9901974,0.00003929238,0.001623616,0.0006453799],"study_design_scores_gemma":[0.0008332551,0.0001106979,0.02206026,0.000003448001,0.00002610238,0.0001702099,0.0001561833,0.000003888053,0.599674,0.00003726363,0.3766961,0.0002285945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978284,0.0005625114,0.0003396273,0.0005675568,0.0001368521,0.0001671854,0.0001388864,0.00001197055,0.0002470027],"genre_scores_gemma":[0.9930299,0.001302589,0.00008140432,0.002647764,0.0002711524,0.00002141122,0.002403475,0.00001644072,0.0002258532],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3905234,"threshold_uncertainty_score":0.4544268,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2075828741","doi":"10.1021/bi9016457","title":"New Glucosidase Inhibitors from an Ayurvedic Herbal Treatment for Type 2 Diabetes: Structures and Inhibition of Human Intestinal Maltase-Glucoamylase with Compounds from <i>Salacia reticulata</i>","year":2009,"lang":"en","type":"article","venue":"Biochemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":184,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University; University of Waterloo; University of Toronto; Ontario Institute for Cancer Research","funders":"National Center for Research Resources; Canadian Institutes of Health Research","keywords":"Acarbose; Maltase; Alpha-glucosidase; Glycoside hydrolase; Chemistry; Glucosidases; Enzyme; Sucrase; Biochemistry; Type 2 diabetes; Pharmacology; Hydrolysis; Traditional medicine; Diabetes mellitus; Medicine; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.01252279477656193,"gpt":0.260650846427892,"spread":0.2481280516513301,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003592968,0.0002074868,0.000174966,0.00001934916,0.00007112567,0.00003327549,0.00006158904,0.0001522111,0.00001970465],"category_scores_gemma":[0.00002760921,0.0001843059,0.00004172234,0.00006087367,0.00007515295,0.00001091658,0.00001909062,0.00005106449,3.45096e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002494755,"about_ca_system_score_gemma":0.0000737959,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006294737,"about_ca_topic_score_gemma":0.00001726897,"domain_scores_codex":[0.99907,0.00002146299,0.0002221048,0.0004400321,0.00009969265,0.0001467051],"domain_scores_gemma":[0.999316,0.000008158249,0.0001512095,0.0002856547,0.00009886459,0.0001401003],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000301144,0.0001036087,0.003857449,0.00001853296,0.00003577512,0.00000126152,0.00004129844,0.000002674586,0.993135,0.00000654909,0.0007787989,0.001717857],"study_design_scores_gemma":[0.001368092,0.001348753,0.006485675,0.00005965854,0.00006373606,0.000003538024,0.00005667857,0.00002156071,0.9898667,0.0001778625,0.0003380935,0.0002097074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986029,0.0005625472,0.0001937119,0.0001373909,0.00005858932,0.0001614424,0.0002335332,0.00002294374,0.00002699989],"genre_scores_gemma":[0.9881677,0.00002903952,0.001672007,0.000135358,0.000723487,0.000007328961,0.009184746,0.0000187035,0.00006163312],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01043514,"threshold_uncertainty_score":0.7515778,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2037891557","doi":"10.1074/jbc.m410468200","title":"Mechanistic and Structural Analysis of a Family 31 α-Glycosidase and Its Glycosyl-enzyme Intermediate","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":178,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of British Columbia; Michael Smith Health Research BC; U.S. Department of Energy; Howard Hughes Medical Institute","keywords":"Random hexamer; Hydrolase; Glycoside hydrolase; Chemistry; Glycosyl; Structural similarity; Active site; Carboxylate; Stereochemistry; Enzyme; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01482713499720957,"gpt":0.2541606005174457,"spread":0.2393334655202362,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001277871,0.0001109226,0.0002481696,0.00004247176,0.00002959901,0.00001354732,0.00008906578,0.0001491891,0.00001737059],"category_scores_gemma":[0.0001964086,0.00008074313,0.00009514648,0.000123774,0.0000778257,0.000006488673,0.00006558614,0.0001083667,1.930228e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001191289,"about_ca_system_score_gemma":0.00003275667,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":9.657116e-7,"about_ca_topic_score_gemma":4.327703e-7,"domain_scores_codex":[0.999301,0.00001882732,0.0003220498,0.0001729143,0.00008328485,0.0001019255],"domain_scores_gemma":[0.9993725,0.000009877342,0.0002945708,0.00008384242,0.0001408619,0.00009835544],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001516947,0.00002431217,0.0007063524,0.00002567359,0.0001930923,0.000005700301,0.00001709091,0.00003711413,0.998518,0.00002313605,0.000007941228,0.0002898446],"study_design_scores_gemma":[0.0005592753,0.0002661026,0.01739248,0.00001703818,0.0001738319,0.0001037209,0.00006986938,0.00008049134,0.9808959,0.0001966209,0.0001383492,0.0001062742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980577,0.001245628,0.0004669055,0.00008486932,0.00005119157,0.0000321041,0.00002751692,0.000003083696,0.00003097885],"genre_scores_gemma":[0.9987186,0.0007908466,0.0001812822,0.00008653634,0.0001361931,9.362474e-7,0.00005179846,0.000004296631,0.00002947702],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01762211,"threshold_uncertainty_score":0.3292609,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4248569559","doi":"10.1016/j.biotechadv.2005.06.003","title":"Fungal glucoamylases","year":2005,"lang":"en","type":"review","venue":"Biotechnology Advances","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":170,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"","keywords":"Starch; Glycosylation; Proteases; Chemistry; Enzyme; Fermentation; Biochemistry; Food science","retraction":null,"screen_n_in":null,"score":{"opus":0.02026424881088772,"gpt":0.3251078943329046,"spread":0.3048436455220169,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00006439223,0.0003019366,0.0005111936,0.0001363957,0.00007717496,0.00001276967,0.0003181593,0.001017865,0.00004720329],"category_scores_gemma":[0.0001180663,0.0002617266,0.0001873282,0.0001818172,0.000169313,0.00000573929,0.0001286735,0.0002478058,0.0001266817],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001828882,"about_ca_system_score_gemma":0.00008082465,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":2.282769e-7,"about_ca_topic_score_gemma":0.00000480781,"domain_scores_codex":[0.9987755,0.00004978035,0.000305094,0.0005762293,0.00006870577,0.0002246324],"domain_scores_gemma":[0.9991869,0.000008434133,0.0002436415,0.0004959083,0.00003014363,0.00003491803],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000004048752,0.00002816162,7.678774e-7,0.0006119665,0.00004172402,0.00000187131,6.341592e-7,4.224235e-7,0.0006708987,0.0001829833,0.0009074538,0.9975491],"study_design_scores_gemma":[0.00006367638,0.00008116316,3.238955e-7,0.0003271271,0.00008001876,0.0001298662,0.000004834201,1.59615e-7,0.007147222,0.000009789275,0.9918764,0.0002794022],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00001374582,0.998328,0.0003080085,0.0002193164,0.0004679057,0.0002407997,0.00004416216,0.0001129427,0.0002651195],"genre_scores_gemma":[0.00001310089,0.9961779,0.0006439759,0.00008424011,0.0009268451,0.00007866879,0.0005449852,0.00004119914,0.001489064],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9972697,"threshold_uncertainty_score":0.9999835,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2169420596","doi":"10.1139/w04-123","title":"Keratinolytic potential of<i>Bacillus licheniformis</i>RG1: structural and biochemical mechanism of feather degradation","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":166,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"Council of Scientific and Industrial Research, India","keywords":"Bacillus licheniformis; Keratinase; Extracellular; Feather; Bacteria; Microbiology; Biology; Biochemistry; Bacillus (shape); Bacillales; Enzyme; Chemistry; Bacillus subtilis","retraction":null,"screen_n_in":null,"score":{"opus":0.004762696729496241,"gpt":0.1920741026061933,"spread":0.187311405876697,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009325906,0.00007884942,0.0001418663,0.00008485687,0.00003034894,0.000005480636,0.00008534511,0.0001365133,0.00005241159],"category_scores_gemma":[0.00003983011,0.00007116791,0.000052476,0.0000376651,0.0001092849,0.000006926574,0.00001188493,0.00007083752,6.748076e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000161941,"about_ca_system_score_gemma":0.0002095406,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005314784,"about_ca_topic_score_gemma":0.0003152057,"domain_scores_codex":[0.999441,0.00003351879,0.0002831084,0.0001012674,0.0000227961,0.0001182696],"domain_scores_gemma":[0.9994103,0.000002589149,0.0002322418,0.00008441485,0.0001722198,0.00009819009],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002811339,0.000004675041,0.0002776215,0.000009048541,0.00003456995,9.904231e-7,0.00005316774,0.00001247258,0.9978237,0.0001500187,0.000357057,0.001248545],"study_design_scores_gemma":[0.0003835376,0.0001744971,0.0005830181,0.000009193103,0.00002341926,0.0006899934,0.00004108554,0.00001682213,0.9938418,0.00004363296,0.004120882,0.00007210924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977242,0.0008432431,0.0007615454,0.0003827613,0.0001720584,0.00004673882,0.00004285837,8.13439e-7,0.00002575702],"genre_scores_gemma":[0.9982332,0.00006153219,0.001164143,0.000117786,0.0002081823,3.299472e-7,0.000078736,0.000007336563,0.0001287836],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00398191,"threshold_uncertainty_score":0.2902143,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2126715684","doi":"10.1021/bi0606694","title":"Structure and Mechanism of Chitin Deacetylase from the Fungal Pathogen <i>Colletotrichum lindemuthianum</i><sup>,</sup>","year":2006,"lang":"en","type":"article","venue":"Biochemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":166,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Wellcome Trust","keywords":"Chitin; Active site; Stereochemistry; Histidine; Chemistry; Binding site; Biochemistry; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.003321814325316705,"gpt":0.1824051194058235,"spread":0.1790833050805068,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008059677,0.0001625209,0.0001219256,0.00001180951,0.00009388868,0.00002497109,0.0001536358,0.0002405987,0.00005254468],"category_scores_gemma":[0.00006069682,0.0001325944,0.00005815759,0.00008102966,0.00008082359,0.000003235112,0.00008850863,0.0001115905,0.000001573101],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007325722,"about_ca_system_score_gemma":0.00005561451,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000296284,"about_ca_topic_score_gemma":0.000003921499,"domain_scores_codex":[0.9991102,0.00003811047,0.0002163817,0.0003542903,0.0001288735,0.0001521505],"domain_scores_gemma":[0.9993937,0.00001142625,0.0001269141,0.0003483645,0.00007191073,0.00004769125],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000370231,0.00003002649,0.001466345,0.00001909466,0.0000230544,0.000001188611,0.00002732753,0.00001743313,0.996112,0.00007643898,0.001835541,0.0003544908],"study_design_scores_gemma":[0.0004074024,0.00002747348,0.001478177,0.00001078845,0.00002671727,0.00002214407,0.00007665154,0.00007794389,0.9937888,0.0002400526,0.003690449,0.0001533493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968914,0.001521033,0.0002689032,0.0003456047,0.00006387949,0.0001151231,0.000572248,0.00001430457,0.0002074703],"genre_scores_gemma":[0.9964406,0.0001130953,0.0004081589,0.0002372607,0.0009790414,0.000007918483,0.00112477,0.00001949446,0.0006696067],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002323185,"threshold_uncertainty_score":0.5407041,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1979491775","doi":"10.1016/j.biotechadv.2004.11.001","title":"Bioprocessing strategies to improve heterologous protein production in filamentous fungal fermentations","year":2004,"lang":"en","type":"article","venue":"Biotechnology Advances","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":164,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"","keywords":"Heterologous; Bioprocess; Protease; Biology; Bioprocess engineering; Recombinant DNA; Protein engineering; Biochemistry; Microbiology; Enzyme; Biotechnology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.005535049325832803,"gpt":0.257057242606487,"spread":0.2515221932806542,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007037236,0.0001272569,0.00009617036,0.0001063937,0.00009255775,0.00002659339,0.0001190671,0.0002010614,0.000003700632],"category_scores_gemma":[0.00008728373,0.0001286756,0.00002077741,0.0002530627,0.0001029632,0.00003200673,0.0000503235,0.0001128907,0.0000111692],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003876099,"about_ca_system_score_gemma":0.00004867581,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009965145,"about_ca_topic_score_gemma":0.0001518098,"domain_scores_codex":[0.9990711,0.00001675281,0.0001844129,0.0004534915,0.00006484504,0.0002094611],"domain_scores_gemma":[0.9996365,7.942672e-7,0.00007804194,0.0002144123,0.00004269387,0.00002754398],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005790267,0.00007676271,0.0001343505,0.00001864669,0.00000639888,0.000002053307,0.00005350259,0.0008138019,0.9839677,0.0002517376,0.000006020563,0.01461112],"study_design_scores_gemma":[0.0002950507,0.0003453487,0.0009273152,0.00001976246,0.000003068852,0.00002138336,0.0004047885,0.000001534164,0.9920332,0.0008162175,0.004989102,0.0001431958],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9909843,0.0005122849,0.003825115,0.0038385,0.0002769533,0.0004319938,0.000006107107,0.00008249555,0.00004228583],"genre_scores_gemma":[0.9960353,0.0001543986,0.003150506,0.0001500188,0.00012889,0.0001711038,0.00005345987,0.00001294352,0.0001433907],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01446792,"threshold_uncertainty_score":0.5247236,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1764005280","doi":"10.1016/s0065-2164(05)58001-8","title":"Physiology and Biotechnology of Aspergillus","year":2005,"lang":"en","type":"article","venue":"Advances in applied microbiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":160,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"","keywords":"Aspergillus nidulans; Aspergillus; Biology; Aspergillus fumigatus; Aspergillus oryzae; Microbial genetics; Aspergillus niger; Organism; Biochemistry; Microbiology; Enzyme; Gene; Genetics; Mutant","retraction":null,"screen_n_in":null,"score":{"opus":0.002542634454221351,"gpt":0.2129472012955902,"spread":0.2104045668413689,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005734587,0.00009156726,0.0001475941,0.00006547785,0.00001720182,0.000001010367,0.00008838365,0.000192807,0.00002058521],"category_scores_gemma":[0.00001355574,0.00008891577,0.00001579655,0.00007253903,0.0002485457,0.0000031583,0.0000782327,0.00006822335,0.000005976037],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006099219,"about_ca_system_score_gemma":0.00000982504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":6.731623e-7,"about_ca_topic_score_gemma":0.00002392246,"domain_scores_codex":[0.9993564,0.00001953058,0.000180001,0.0002900292,0.0000101597,0.0001438376],"domain_scores_gemma":[0.9997203,0.000005952877,0.00008090073,0.0001649177,0.00001437634,0.00001356256],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006289061,0.0000327034,0.0001472509,0.00001218054,0.000005801698,1.008459e-7,0.0000179736,0.00005894354,0.9709986,0.003048481,0.00002864762,0.02558642],"study_design_scores_gemma":[0.0003076081,0.00005820475,0.0002414554,0.000001747736,0.000001834177,0.00002261133,0.00002231582,0.000002797045,0.7490905,0.0001393033,0.2500397,0.00007191394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945104,0.003179483,0.0007186194,0.0003485381,0.0001101895,0.0001225882,0.00001113591,0.00001324996,0.0009858259],"genre_scores_gemma":[0.9925501,0.004013306,0.002867656,0.0002932332,0.00009021178,0.000009416749,0.000109913,0.000008346619,0.00005777613],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2500111,"threshold_uncertainty_score":0.362588,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2441942160","doi":"10.1080/07388551.2016.1185388","title":"Microbial keratinases: industrial enzymes with waste management potential","year":2016,"lang":"en","type":"review","venue":"Critical Reviews in Biotechnology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":160,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada; University of Alberta; University of Lethbridge","funders":"Council of Scientific and Industrial Research, India","keywords":"Proteases; Fermentation; Environmental pollution; Industrial waste; Industrial microbiology; Biochemical engineering; Biotechnology; Chemistry; Pulp and paper industry; Enzyme; Waste management; Environmental science; Biology; Food science; Biochemistry; Engineering","retraction":null,"screen_n_in":null,"score":{"opus":0.03160017259681031,"gpt":0.3172082577186529,"spread":0.2856080851218426,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003098922,0.0004755107,0.001183764,0.0002546747,0.00005991332,0.00003063644,0.0004440915,0.001375097,0.0000907108],"category_scores_gemma":[0.0003979869,0.0003199681,0.0002488567,0.0003161707,0.0004000971,0.000006580305,0.0002917914,0.0004923097,0.0001287078],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005369944,"about_ca_system_score_gemma":0.00008997395,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":7.762422e-7,"about_ca_topic_score_gemma":0.000004162389,"domain_scores_codex":[0.9973673,0.0003160715,0.0008433187,0.0009198098,0.0001105558,0.0004429108],"domain_scores_gemma":[0.998901,0.00001850955,0.0002089118,0.0007543506,0.00004352847,0.00007369458],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002571557,0.00008589446,4.377378e-7,0.003356075,0.00005123428,0.00002546262,9.797948e-7,4.377972e-8,0.001646239,0.003604753,0.003762287,0.9874409],"study_design_scores_gemma":[0.0003504676,0.0001984806,1.358958e-7,0.00867938,0.0001751861,0.0001702092,0.000006397862,1.543581e-7,0.002820925,0.00002718963,0.9871772,0.00039427],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0000148693,0.995155,0.001869331,0.0007784831,0.000756505,0.001168492,0.0000479175,0.00003544375,0.0001739942],"genre_scores_gemma":[0.00002902763,0.9965895,0.0008766339,0.0001387827,0.001106146,0.0003161868,0.0003162387,0.00005610281,0.0005714265],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9870466,"threshold_uncertainty_score":0.9999253,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2015883754","doi":"10.1021/jm301273u","title":"Order and Disorder: Differential Structural Impacts of Myricetin and Ethyl Caffeate on Human Amylase, an Antidiabetic Target","year":2012,"lang":"en","type":"article","venue":"Journal of Medicinal Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":157,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Chemistry; Myricetin; Flavonols; Active site; Binding site; Stereochemistry; Combinatorial chemistry; Enzyme; Biochemistry; Polyphenol","retraction":null,"screen_n_in":null,"score":{"opus":0.008146361757687728,"gpt":0.2762674699128859,"spread":0.2681211081551982,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001734643,0.000119504,0.0001805692,0.00002709366,0.00005062252,0.000009648549,0.00006539452,0.0001021674,0.00007573527],"category_scores_gemma":[0.00009576196,0.00009248318,0.00002942804,0.00004017049,0.0001041574,0.00001409201,0.00002790863,0.0001544259,1.018692e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006710157,"about_ca_system_score_gemma":0.00002513162,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004212898,"about_ca_topic_score_gemma":7.294129e-7,"domain_scores_codex":[0.9992844,0.00003386729,0.0002521798,0.0001127432,0.0001694336,0.0001473863],"domain_scores_gemma":[0.9993222,0.000006961577,0.0002710423,0.0001048017,0.0001113013,0.000183729],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001172878,0.00006343782,0.04307531,0.00010428,0.00002726185,0.000001149186,0.0001237555,0.000001695098,0.955832,0.000002342667,0.0001113652,0.0005400941],"study_design_scores_gemma":[0.0009175336,0.0004415965,0.1047066,0.00005049366,0.00004754097,0.0001622961,0.0001950891,0.000008342043,0.8929098,0.00001457079,0.00044175,0.0001044031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984416,0.001116452,0.00005103654,0.0001768648,0.0001189028,0.0000328899,0.000007093712,0.000002090316,0.00005301521],"genre_scores_gemma":[0.9986333,0.0002515766,0.0001063267,0.00005427853,0.0008282966,4.718677e-7,0.0000491613,0.00001091204,0.00006569294],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06292225,"threshold_uncertainty_score":0.3771355,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1995601054","doi":"10.1016/s0022-2836(02)00374-1","title":"Differential Oligosaccharide Recognition by Evolutionarily-related β-1,4 and β-1,3 Glucan-binding Modules","year":2002,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":148,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research; University of British Columbia","funders":"","keywords":"Thermotoga maritima; Oligosaccharide; Polysaccharide; Chemistry; Biochemistry; Binding site; Stereochemistry; Computational biology; Biology; Gene; Escherichia coli","retraction":null,"screen_n_in":null,"score":{"opus":0.008980480985096292,"gpt":0.2257349743526448,"spread":0.2167544933675485,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001027371,0.0001207968,0.0001536824,0.00009068353,0.00006209766,0.00001683001,0.00009096579,0.0001961982,0.0001586591],"category_scores_gemma":[0.00009835634,0.0001115602,0.00007895278,0.00006735908,0.00008033859,0.00000911606,0.00003969416,0.00013563,0.000007887176],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000147268,"about_ca_system_score_gemma":0.00001067933,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000205634,"about_ca_topic_score_gemma":5.611225e-7,"domain_scores_codex":[0.9991379,0.0001106044,0.000327235,0.0001941582,0.00007899661,0.0001511061],"domain_scores_gemma":[0.9994097,0.00000588849,0.0002740364,0.0001038164,0.0001300499,0.00007648997],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003573141,0.00005797935,0.000592716,0.000005314342,0.00007899493,0.000003086395,0.00002028698,0.000003321453,0.9903839,0.00006240237,0.001694191,0.007062114],"study_design_scores_gemma":[0.001072726,0.0005686568,0.0008591883,0.00002154826,0.00006019904,0.0004873991,0.00003393166,0.0001415848,0.9854676,0.0006672894,0.01039256,0.0002273231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871525,0.001992275,0.009636521,0.0006464422,0.0003738832,0.00006079448,0.00002779636,0.000005975748,0.0001038152],"genre_scores_gemma":[0.9973016,0.001476375,0.0005038028,0.0001555368,0.0001809375,0.000002438663,0.0001954313,0.00001452911,0.0001693422],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01014911,"threshold_uncertainty_score":0.4549291,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2119528492","doi":"10.1016/s0008-6215(03)00002-8","title":"Carbohydrate esterase family 4 enzymes: substrate specificity","year":2003,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":136,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institut National de la Recherche Scientifique","funders":"University of Sheffield","keywords":"Chemistry; Esterase; Xylan; Bacillus pumilus; Enzyme; Biochemistry; Substrate (aquarium); Chitin; Peptidoglycan; Bacteria; Biology; Chitosan","retraction":null,"screen_n_in":null,"score":{"opus":0.05760693829487215,"gpt":0.3271735512603042,"spread":0.2695666129654321,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001137058,0.0002194572,0.0001766618,0.0001953024,0.0002654578,0.0001424477,0.0002622071,0.0002112966,0.00008662584],"category_scores_gemma":[0.0002525881,0.0002187993,0.00008921893,0.0006297323,0.0002036,0.0000149855,0.00008092824,0.0003578613,0.000159391],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004944448,"about_ca_system_score_gemma":0.000241569,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002623326,"about_ca_topic_score_gemma":0.00002119757,"domain_scores_codex":[0.9973137,0.0006169777,0.0003035582,0.0006943466,0.0004282496,0.0006432083],"domain_scores_gemma":[0.9984867,0.00002189603,0.00006388909,0.0007114995,0.000479257,0.0002367816],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004675896,0.00008255874,0.0007961012,0.00002011566,0.00002754765,0.00001587596,0.00006073629,0.00004357786,0.9954396,0.001862739,0.001391223,0.0002131462],"study_design_scores_gemma":[0.0003518318,0.0001362758,0.000983389,0.000011534,0.000006429139,0.000008355732,0.0002296987,0.00004967845,0.9344593,0.0002409716,0.06326718,0.0002553107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9888802,0.001066869,0.0002745379,0.000212987,0.0004588491,0.0003205011,0.00001805373,0.00003702562,0.008731037],"genre_scores_gemma":[0.9947938,0.0006629862,0.000115439,0.0001304145,0.0004486519,0.00006377242,0.00018503,0.00005071725,0.003549195],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06187596,"threshold_uncertainty_score":0.8922376,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2055159539","doi":"10.1074/jbc.275.7.4973","title":"Cloning, Expression, Characterization, and Nucleophile Identification of Family 3, Aspergillus nigerβ-Glucosidase","year":2000,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":136,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Aspergillus niger; Cloning (programming); Identification (biology); Biology; Expression (computer science); Computational biology; Characterization (materials science); Genetics; Biotechnology; Computer science; Botany; Programming language","retraction":null,"screen_n_in":null,"score":{"opus":0.01137766142921075,"gpt":0.2347314193001784,"spread":0.2233537578709676,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001975445,0.0001020837,0.000163249,0.00001768329,0.00004913472,0.00001734661,0.0001210098,0.000171407,0.000202667],"category_scores_gemma":[0.0001157969,0.00007988103,0.00006696498,0.00006735908,0.00009368173,0.00001238091,0.00002713651,0.00009351101,0.000001944608],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006730187,"about_ca_system_score_gemma":0.00002362984,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":2.968632e-7,"about_ca_topic_score_gemma":2.127681e-8,"domain_scores_codex":[0.9990813,0.00003907007,0.0005050895,0.000176027,0.0001048006,0.00009370038],"domain_scores_gemma":[0.9991708,0.00000620764,0.0004104528,0.0001454048,0.000193613,0.00007355159],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000158674,0.00007682596,0.001727728,0.00001953273,0.0000143237,0.000001355673,0.00002536711,0.000006806278,0.9949076,0.000002229032,0.0001635891,0.002895983],"study_design_scores_gemma":[0.0002862869,0.00009773162,0.03462654,0.00002135758,0.000008349946,0.00006158986,0.000031742,0.000009039335,0.9489895,0.00001508119,0.01576446,0.0000883367],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985688,0.00040897,0.0006203798,0.0001370608,0.00006453905,0.00004187794,0.00002039364,0.000005422426,0.0001325034],"genre_scores_gemma":[0.9965291,0.001958558,0.0001194419,0.0001029748,0.0003479362,0.00000165859,0.0001601028,0.000007803113,0.0007724412],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0459181,"threshold_uncertainty_score":0.3257454,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2007938336","doi":"10.1021/bi011821z","title":"Mechanistic Analyses of Catalysis in Human Pancreatic α-Amylase:  Detailed Kinetic and Structural Studies of Mutants of Three Conserved Carboxylic Acids","year":2002,"lang":"en","type":"article","venue":"Biochemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":132,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Chemistry; Hydrolysis; Stereochemistry; Mutant; Enzyme; Enzyme kinetics; Nucleophile; Glycosidic bond; Amide; Alanine; Catalysis; Active site; Site-directed mutagenesis; Saturated mutagenesis; Directed evolution; Biochemistry; Amino acid; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.04675518768709933,"gpt":0.3080743021765904,"spread":0.2613191144894911,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006535652,0.0001295636,0.0003151369,0.00005255277,0.00002195057,0.000003038884,0.00009198734,0.00009531719,0.00003904717],"category_scores_gemma":[0.0001775695,0.0001218771,0.00005626447,0.0001592248,0.0001964613,0.000002966761,0.00005743014,0.00003954785,1.306087e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009152503,"about_ca_system_score_gemma":0.0000140912,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003370983,"about_ca_topic_score_gemma":0.00003220682,"domain_scores_codex":[0.999151,0.00002748381,0.0003814364,0.0002359481,0.0001026617,0.0001014577],"domain_scores_gemma":[0.9992976,0.00001167342,0.0002469356,0.000275755,0.0001375118,0.00003057111],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002594268,0.00003828589,0.01769373,0.0003682626,0.0001501481,0.000001140137,0.00006283035,0.000008510251,0.9815248,0.000005644411,0.000006968556,0.0001136861],"study_design_scores_gemma":[0.0004282259,0.00007973372,0.01888996,0.00005575695,0.0001241987,0.000006494707,0.0001813479,0.0002216238,0.9798724,0.00003556791,0.000001161208,0.0001035048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962929,0.003503975,0.00002436376,0.00001439836,0.00001998469,0.00007601877,0.00002716202,0.000003553054,0.00003767972],"genre_scores_gemma":[0.9993925,0.000277664,0.0001184835,0.000005702817,0.00002735502,0.000006938646,0.00009219945,0.000009071147,0.00007006549],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003226311,"threshold_uncertainty_score":0.4970005,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2037029140","doi":"10.1016/j.tifs.2010.07.001","title":"Ovomucin – a glycoprotein with promising potential","year":2010,"lang":"en","type":"review","venue":"Trends in Food Science & Technology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":130,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency","keywords":"Egg white; Emulsion; Nutraceutical; Glycoprotein; Extraction (chemistry); Chemistry; Chromatography; Computational biology; Biochemistry; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.01927929117808624,"gpt":0.3050714233947509,"spread":0.2857921322166647,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003060253,0.0002914889,0.0004775062,0.001722707,0.0001290539,0.00004828893,0.0007070136,0.0006862415,0.00002139983],"category_scores_gemma":[0.00007352578,0.0002321114,0.00008005152,0.00296577,0.0008361267,0.00001355931,0.0002287876,0.0005545598,0.00000794406],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004579219,"about_ca_system_score_gemma":0.0003526422,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002066939,"about_ca_topic_score_gemma":0.000039004,"domain_scores_codex":[0.9981008,0.00003153665,0.0003272539,0.0009240011,0.0002008384,0.0004155314],"domain_scores_gemma":[0.9988683,0.000001383003,0.0002588436,0.000734189,0.00008323402,0.0000540591],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000009523598,0.00004592194,0.000005026891,0.0001372378,0.000009917024,0.000004447017,0.000005280607,0.000001005635,0.03709901,0.0003005978,0.0000143105,0.9623677],"study_design_scores_gemma":[0.0002371719,0.000635695,0.000008327947,0.0004813782,0.00003745706,0.0003573415,0.0000100097,0.000003265553,0.02800952,0.00004533673,0.9698206,0.0003539581],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01056347,0.9864285,0.0004933263,0.0004068855,0.0005079717,0.0005744491,0.00002359761,0.0001370966,0.0008646837],"genre_scores_gemma":[0.04959404,0.9456034,0.002560616,0.00004235909,0.000348254,0.0003210265,0.0002957527,0.00008420806,0.001150289],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9698063,"threshold_uncertainty_score":0.946523,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2121793013","doi":"10.1016/j.jmb.2005.03.026","title":"Structure of a Full Length Psychrophilic Cellulase from Pseudoalteromonas haloplanktis revealed by X-ray Diffraction and Small Angle X-ray Scattering","year":2005,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":124,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Polar Knowledge Canada","keywords":"Psychrophile; Small-angle X-ray scattering; Cellulase; Glycoside hydrolase; Crystallography; Cell wall; Linker; Chemistry; Hydrolase; Cellulose; Stereochemistry; Enzyme; Scattering; Biochemistry; Optics; Physics","retraction":null,"screen_n_in":null,"score":{"opus":0.005696088267451434,"gpt":0.2296477025727527,"spread":0.2239516143053012,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001110385,0.0001642628,0.0002542825,0.00008526588,0.00003914259,0.00001371596,0.0001364422,0.0002143685,0.00004253069],"category_scores_gemma":[0.00005553336,0.000147325,0.00008868365,0.00006224024,0.00008507423,0.00001075327,0.00004729139,0.0001630201,0.000001285595],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000158327,"about_ca_system_score_gemma":0.00002988568,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001221121,"about_ca_topic_score_gemma":0.00001278807,"domain_scores_codex":[0.9989302,0.0001438474,0.0004355609,0.0002621119,0.00007369275,0.0001545652],"domain_scores_gemma":[0.9990674,0.00000998315,0.0004913145,0.0002119528,0.0001310303,0.00008834337],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002068884,0.00007532469,0.001983448,0.00001577038,0.0000993611,0.000003863816,0.00004619165,0.00006935998,0.9935268,0.000006678228,0.0003320844,0.003634226],"study_design_scores_gemma":[0.001177549,0.0007313969,0.006736077,0.00002959506,0.0000645435,0.0002272341,0.00003415692,0.00004916787,0.9777126,0.00009056123,0.01295069,0.0001964456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9836554,0.002782642,0.01233453,0.0007958331,0.000254227,0.00008489428,0.00007794237,0.000004329653,0.00001018532],"genre_scores_gemma":[0.9936569,0.0006709442,0.004571154,0.0003376576,0.0004672474,0.000001258957,0.0002365836,0.00002047959,0.00003773722],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01581422,"threshold_uncertainty_score":0.6007739,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2012200956","doi":"10.1073/pnas.0808972106","title":"Evidence that family 35 carbohydrate binding modules display conserved specificity but divergent function","year":2009,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":122,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Sherbrooke; University of Victoria","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust; Michael Smith Health Research BC; University of Victoria","keywords":"Biochemistry; Carbohydrate-binding module; Cell wall; Enzyme; Glycoside hydrolase; Context (archaeology); Biology; Polysaccharide; Hydrolase; Binding site; Chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.07110202292258748,"gpt":0.2874580402218454,"spread":0.2163560172992579,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005406053,0.00008160835,0.00008342229,0.00006715456,0.0001762827,0.00002433678,0.0003228901,0.0000732753,0.000005399253],"category_scores_gemma":[0.000256273,0.00005909355,0.00005812679,0.0002751139,0.0002493699,0.00005277702,0.00006773975,0.00007003882,9.563047e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001476341,"about_ca_system_score_gemma":0.0000177351,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002647633,"about_ca_topic_score_gemma":5.866679e-8,"domain_scores_codex":[0.9989338,0.000008735649,0.0001902753,0.0002550636,0.0005084604,0.0001037024],"domain_scores_gemma":[0.9994016,0.00001120053,0.0003623574,0.00001155772,0.0001875618,0.00002576939],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003550948,0.00002427668,0.00795297,0.00001255099,0.000007331422,1.622325e-9,0.00001989305,0.00006368839,0.9891183,0.002139982,0.0003324422,0.0002929967],"study_design_scores_gemma":[0.0000583671,0.00005972795,0.228111,0.00005110243,0.000007698789,0.000001434409,0.00006804315,0.0001693266,0.7701225,0.001116201,0.0001771266,0.00005751049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974825,0.0002754657,0.00002693188,0.001566121,0.00006212969,0.0001117227,0.00001146082,0.00000654814,0.0004570538],"genre_scores_gemma":[0.9987906,0.0003263903,0.0001912921,0.0003208331,0.0001356535,0.000003403096,0.000001415628,0.000002415277,0.0002280548],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.220158,"threshold_uncertainty_score":0.2409765,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2151250250","doi":"10.1128/jb.184.1.76-81.2002","title":"Heterologous Production of <i>Clostridium cellulovorans engB</i> , Using Protease-Deficient <i>Bacillus subtilis</i> , and Preparation of Active Recombinant Cellulosomes","year":2002,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":122,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Cellulosome; Clostridium thermocellum; Biology; Biochemistry; Bacillus subtilis; Recombinant DNA; Molecular biology; Cellulase; Enzyme; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.01622962599656608,"gpt":0.2378138014215299,"spread":0.2215841754249639,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002440961,0.0001307491,0.0003010528,0.0001104868,0.00004309897,0.000006269536,0.00008326517,0.0001525417,0.00002299411],"category_scores_gemma":[0.0001179574,0.0001151539,0.00008892232,0.00009262722,0.0001505878,0.00002444897,0.00003711482,0.0001158946,5.386801e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002022735,"about_ca_system_score_gemma":0.00003922059,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005447345,"about_ca_topic_score_gemma":0.000001862181,"domain_scores_codex":[0.9987891,0.0001789501,0.000580847,0.000215289,0.0001021557,0.0001336414],"domain_scores_gemma":[0.9984713,0.000009479848,0.0009427845,0.0001757343,0.0003530006,0.00004775955],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005637839,0.0002076981,0.0008710913,0.00006023703,0.00005735971,0.000001518214,0.0003058927,0.0001400344,0.9963267,0.000004330513,0.0001098073,0.001351542],"study_design_scores_gemma":[0.0005317018,0.001557956,0.00147798,0.00002864921,0.00005195203,0.0003548588,0.00009498249,0.000108677,0.9935269,0.00001534025,0.002152892,0.0000981035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997716,0.0005687681,0.0004041675,0.0002274636,0.0008222029,0.000220015,0.00001110889,0.000003194071,0.00002709261],"genre_scores_gemma":[0.9984912,0.0007524423,0.0003744183,0.00002869591,0.0002194114,0.000003031829,0.00002251321,0.0000126948,0.0000955898],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002799798,"threshold_uncertainty_score":0.4695839,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2141736381","doi":"10.1046/j.1432-1033.2003.03404.x","title":"Relation between domain evolution, specificity, and taxonomy of the α‐amylase family members containing a C‐terminal starch‐binding domain","year":2003,"lang":"en","type":"article","venue":"European Journal of Biochemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":120,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"Vedecká Grantová Agentúra MŠVVaŠ SR a SAV","keywords":"Glycoside hydrolase; Amylase; Enzyme; Nostoc; Biology; Phylogenetic tree; Biochemistry; Starch; Chemistry; Genetics; Bacteria; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01640552001282529,"gpt":0.2180928145580817,"spread":0.2016872945452564,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008919694,0.0001169769,0.0001332221,0.00003812566,0.000100854,0.00002224733,0.0001472432,0.00004910183,0.0000123598],"category_scores_gemma":[0.0001401326,0.00009812303,0.00008559765,0.00009362836,0.0001358616,0.00001132384,0.00005596312,0.0001718219,8.503968e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003337122,"about_ca_system_score_gemma":0.00008661392,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":6.540995e-7,"about_ca_topic_score_gemma":2.191917e-7,"domain_scores_codex":[0.9988313,0.0002892169,0.0004317706,0.0001674264,0.0001575926,0.0001226499],"domain_scores_gemma":[0.9990517,0.00001116098,0.0005381877,0.0001876172,0.0001327306,0.00007862128],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008456581,0.00002062985,0.0203544,0.00002362741,0.00004126543,0.000005737607,0.0001036671,0.000009855388,0.9788139,0.00004278213,0.0002466538,0.0002529013],"study_design_scores_gemma":[0.001220297,0.0002961433,0.04516246,0.0001288904,0.0000453736,0.0002928404,0.001656791,0.000001365709,0.9243509,0.00007200096,0.02657018,0.0002027522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929297,0.0002983691,0.004306735,0.00009233359,0.0001408703,0.00007178047,0.00001045321,0.000002719437,0.002147022],"genre_scores_gemma":[0.9975235,0.00003326121,0.001898261,0.00002930146,0.0003209943,6.693121e-7,0.00001653647,0.00001611731,0.0001613199],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05446302,"threshold_uncertainty_score":0.4001341,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3112189859","doi":"10.3389/fmicb.2020.580164","title":"Microbial Keratinase: Next Generation Green Catalyst and Prospective Applications","year":2020,"lang":"en","type":"review","venue":"Frontiers in Microbiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"Medical Research Council; Department of Science and Technology, Ministry of Science and Technology, India; South African Medical Research Council","keywords":"Keratinase; Biotechnology; Biochemical engineering; Proteases; Organism; Bioconversion; Industrial microbiology; Biodegradation; Biology; Business; Ecology; Enzyme; Food science; Engineering; Biochemistry; Fermentation","retraction":null,"screen_n_in":null,"score":{"opus":0.01801618658711377,"gpt":0.2564713077749581,"spread":0.2384551211878444,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008795357,0.000299411,0.0006447492,0.0001204353,0.00008150968,0.00003335288,0.0001712293,0.000487543,0.00000768425],"category_scores_gemma":[0.00002286538,0.0002956369,0.0001071175,0.0001923708,0.0001330555,0.000006698459,0.0001220132,0.0002334844,0.0000156877],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006174481,"about_ca_system_score_gemma":0.0001413592,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006745925,"about_ca_topic_score_gemma":0.00002891427,"domain_scores_codex":[0.9984584,0.0001646056,0.0003981121,0.0007636984,0.00002139606,0.0001937371],"domain_scores_gemma":[0.9994131,0.000003471711,0.000216837,0.0002655015,0.00004958683,0.00005148866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002287774,0.00006565399,0.0001117891,0.0014961,0.0002042156,0.000003133251,0.00007356537,5.455967e-7,0.3999765,0.00003990572,0.02344777,0.574558],"study_design_scores_gemma":[0.0001939838,0.0000604868,0.000002415549,0.00009206881,0.00009649078,0.0001199323,0.00001517573,0.000004181321,0.004165529,0.000006099285,0.9949611,0.0002825075],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000117765,0.9928005,0.005044726,0.0001078442,0.0005059052,0.001132967,0.000240472,0.00001562978,0.00003415574],"genre_scores_gemma":[0.00005890028,0.9838888,0.002623536,0.0001463633,0.001119636,0.0003475297,0.0112381,0.00004304002,0.0005340732],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9715133,"threshold_uncertainty_score":0.9999496,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2170548956","doi":"10.1074/jbc.m513066200","title":"Structure and Activity of Two Metal Ion-dependent Acetylxylan Esterases Involved in Plant Cell Wall Degradation Reveals a Close Similarity to Peptidoglycan Deacetylases","year":2006,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":113,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Biotechnology and Biological Sciences Research Council; Engineering and Physical Sciences Research Council; Directorate for Biological Sciences; Royal Society","keywords":"Peptidoglycan; Degradation (telecommunications); Cell wall; Metal; Similarity (geometry); Chemistry; Biophysics; Biochemistry; Biology; Engineering; Computer science","retraction":null,"screen_n_in":null,"score":{"opus":0.01505983827785288,"gpt":0.2466551450835104,"spread":0.2315953068056576,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001988514,0.0001396703,0.000242874,0.00003325692,0.00002633858,0.00001535098,0.0001088207,0.0001685889,0.00002021034],"category_scores_gemma":[0.0001163985,0.0001069066,0.00006594763,0.00007169418,0.00004815044,0.0000113873,0.00006188652,0.0001650181,1.484332e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000251387,"about_ca_system_score_gemma":0.00003783839,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002232763,"about_ca_topic_score_gemma":0.00004043167,"domain_scores_codex":[0.9990929,0.00007305259,0.000359093,0.0002204105,0.0001235723,0.0001309434],"domain_scores_gemma":[0.9993409,0.00001991158,0.0003392483,0.0001215348,0.0001016458,0.00007675299],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002944059,0.0001599904,0.04000079,0.00004236474,0.00001229828,0.000004857172,0.00001212296,0.00006300701,0.9591439,0.000002257765,0.00009143795,0.0001725229],"study_design_scores_gemma":[0.0006446287,0.0002008129,0.03125202,0.00002476713,0.00001401143,0.00005526161,0.00003152927,0.000007937806,0.9673864,0.00008849357,0.0001777034,0.0001164548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992112,0.0002493523,0.0001125778,0.0001902084,0.00004309292,0.00008352264,0.00008170028,0.000003396577,0.00002495902],"genre_scores_gemma":[0.9988477,0.0001251782,0.0004958275,0.00007316814,0.0002371409,0.000001922382,0.0001418094,0.000006180102,0.00007103699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008748761,"threshold_uncertainty_score":0.4359526,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1976510931","doi":"10.1074/jbc.m113.522516","title":"Overlapping and Distinct Roles of Aspergillus fumigatus UDP-glucose 4-Epimerases in Galactose Metabolism and the Synthesis of Galactose-containing Cell Wall Polysaccharides","year":2013,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University; National Research Council Canada; McGill University","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Aspergillus fumigatus; Galactose; Galactomannan; Biochemistry; Polysaccharide; Biology; Mannose; Metabolism; Chemistry; Microbiology","retraction":null,"screen_n_in":null,"score":{"opus":0.008699445356070267,"gpt":0.2096835915738803,"spread":0.2009841462178101,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003296691,0.0001359152,0.0003608685,0.000026623,0.00003045223,0.00001780556,0.0001237129,0.0001508624,0.0000421842],"category_scores_gemma":[0.0006207893,0.00008197818,0.00009459977,0.00005919383,0.0002551114,0.00001392252,0.00006608706,0.0001505032,1.687915e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006383897,"about_ca_system_score_gemma":0.00002639371,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002222075,"about_ca_topic_score_gemma":0.00000179628,"domain_scores_codex":[0.9990349,0.00008581785,0.0004880517,0.0001658958,0.00009517999,0.0001301207],"domain_scores_gemma":[0.9990634,0.0001184874,0.0005058088,0.0001211723,0.0001252403,0.00006584575],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000307582,0.00007327026,0.01596475,0.00005466338,0.00003951077,0.000001154646,0.00006609623,0.000002704017,0.9817532,0.000008985784,0.00001286995,0.001715192],"study_design_scores_gemma":[0.0006731834,0.00007600449,0.07340863,0.00005015621,0.0000314996,0.00003106429,0.0003113539,0.00001707612,0.9250736,0.00006473938,0.0001731613,0.00008955759],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994202,0.005307992,0.00002315115,0.0002554748,0.00002650414,0.00006848805,0.000008842714,0.00000222922,0.0001053849],"genre_scores_gemma":[0.9966832,0.002970353,0.0001441079,0.00004934417,0.0001133339,0.000005131564,0.00000693198,0.000006780259,0.00002079982],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05744388,"threshold_uncertainty_score":0.3342973,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2015874015","doi":"10.1074/jbc.m509958200","title":"A Structural and Functional Analysis of α-Glucan Recognition by Family 25 and 26 Carbohydrate-binding Modules Reveals a Conserved Mode of Starch Recognition","year":2005,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"","keywords":"Isothermal titration calorimetry; Starch; Carbohydrate-binding module; Biochemistry; Chemistry; Ligand (biochemistry); Titration; Enzyme; Glycoside hydrolase; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.03153585129135565,"gpt":0.2556358329060306,"spread":0.2240999816146749,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001808117,0.0001041215,0.0002892939,0.00005736556,0.00003404796,0.00001024585,0.00004577708,0.0001681904,0.00004537676],"category_scores_gemma":[0.0001144548,0.00008444461,0.000114878,0.000129186,0.0001247459,0.00001283538,0.00002966978,0.0001042595,1.065526e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001249063,"about_ca_system_score_gemma":0.0000215072,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004958978,"about_ca_topic_score_gemma":0.000001756727,"domain_scores_codex":[0.9991353,0.00005573492,0.0004328715,0.000179551,0.0001045733,0.00009200748],"domain_scores_gemma":[0.9991179,0.00002254489,0.0004520797,0.00007183038,0.0002691469,0.00006654902],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003040592,0.00003810075,0.004193839,0.00003435257,0.0006115714,3.43235e-7,0.00002253348,0.00003428213,0.9932908,5.60044e-7,0.00005358844,0.001415906],"study_design_scores_gemma":[0.0004564846,0.0002094236,0.01514062,0.00001864931,0.0005198756,0.00002868644,0.0001418456,0.0002792469,0.9829431,0.00009122952,0.00005720432,0.0001136987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986851,0.0006672689,0.0001635707,0.0001225077,0.00002183978,0.00004268412,0.0002671156,0.000003260438,0.00002661141],"genre_scores_gemma":[0.9979376,0.0007243817,0.0005628187,0.00004941001,0.0001177848,0.000001949151,0.000577867,0.000005484012,0.00002270933],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01094678,"threshold_uncertainty_score":0.3443551,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2108520201","doi":"10.1007/s00203-009-0513-8","title":"Characterization of the mineral phosphate solubilizing activity of Serratia marcescens CTM 50650 isolated from the phosphate mine of Gafsa","year":2009,"lang":"en","type":"article","venue":"Archives of Microbiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation","funders":"","keywords":"Gluconic acid; Serratia marcescens; Phosphate; Chemistry; Phosphorite; Calcium; Food science; Biochemistry; Extraction (chemistry); Microbiology; Biology; Chromatography; Escherichia coli; Organic chemistry; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.006288840066747331,"gpt":0.2052813095957236,"spread":0.1989924695289763,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008862087,0.0001253305,0.0002402458,0.00002554182,0.00003786559,0.000002213566,0.0002595842,0.0000928419,0.00001881757],"category_scores_gemma":[0.00004943217,0.00008545847,0.0001185687,0.00009355921,0.0002878659,0.000006905651,0.00009231037,0.00007869719,3.218393e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002243581,"about_ca_system_score_gemma":0.00003830352,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004933878,"about_ca_topic_score_gemma":0.00003024317,"domain_scores_codex":[0.9990743,0.0001745108,0.000361018,0.000222678,0.00003501069,0.0001325269],"domain_scores_gemma":[0.9989389,0.00002944759,0.000569668,0.0003725102,0.00007290496,0.00001663489],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004141074,0.0001218449,0.006131155,0.0000240284,0.0000650976,6.512591e-8,0.0004043212,0.0000241189,0.9905755,0.00002384845,0.00003918829,0.002176762],"study_design_scores_gemma":[0.0003433763,0.0002010413,0.1436188,0.00003906939,0.00002552914,0.000003207424,0.000020452,0.000107637,0.8551121,0.00003327872,0.0004292493,0.00006632523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978042,0.0002325405,0.0006612014,0.0006701078,0.0001582538,0.0001968347,0.0002305731,0.000003767548,0.00004253614],"genre_scores_gemma":[0.9986235,0.0002888055,0.000174632,0.0001401266,0.00005475877,0.000001888427,0.0005455243,0.00000861534,0.0001621363],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1374876,"threshold_uncertainty_score":0.3484895,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2400401498","doi":"10.1073/pnas.1524214113","title":"KdgF, the missing link in the microbial metabolism of uronate sugars from pectin and alginate","year":2016,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":108,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada; University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Pectin; Polysaccharide; Cell wall; Bacteria; Microbial metabolism; Metabolism; Metabolite; Biochemistry; Chemistry; Carbohydrate; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.01981201531098145,"gpt":0.2685463744685057,"spread":0.2487343591575242,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008203579,0.00004989816,0.00006382494,0.00003562555,0.00008316379,0.00001233304,0.0003577033,0.00004740964,0.000004189864],"category_scores_gemma":[0.0002894299,0.00002163068,0.00002897768,0.0001685301,0.0005092211,0.00002014206,0.00007260231,0.00005485112,1.247857e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003158159,"about_ca_system_score_gemma":0.0000152557,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005933497,"about_ca_topic_score_gemma":1.441777e-7,"domain_scores_codex":[0.9993609,0.00001524435,0.000165236,0.0001459165,0.0002475765,0.00006512372],"domain_scores_gemma":[0.9996215,0.00003407642,0.0002254114,0.00001058936,0.0001004061,0.000008083687],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001237146,0.000009092224,0.001517003,0.000005845236,0.000005395137,7.585264e-10,0.0001535725,0.000001304157,0.9936602,0.002778485,0.000128889,0.001727846],"study_design_scores_gemma":[0.0001289004,0.00001219788,0.1148393,0.00002460983,0.000006241032,0.000002742467,0.00008089354,0.00001626157,0.8755299,0.007899988,0.001428304,0.00003061485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9707296,0.0003209847,0.000004121323,0.0285545,0.0000213472,0.0000771566,0.0000131039,0.00000116173,0.0002779575],"genre_scores_gemma":[0.9990781,0.0001232318,0.0002450028,0.0003790422,0.00009973077,0.000002527219,3.420814e-7,0.000002023634,0.00006998003],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1181303,"threshold_uncertainty_score":0.1876246,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2042420688","doi":"10.1016/j.fgb.2008.07.014","title":"Analytical and computational approaches to define the Aspergillus niger secretome","year":2009,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":107,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Concordia University","funders":"Biomass Program; Biological and Environmental Research; Natural Sciences and Engineering Research Council of Canada; U.S. Department of Energy; Office of Energy Efficiency and Renewable Energy; Office of Science; Joint Genome Institute","keywords":"Aspergillus niger; Biology; Proteome; Hemicellulose; Glycoside hydrolase; Extracellular; Biochemistry; Secretory protein; Proteomics; Gene; Enzyme; Mass spectrometry; Fungal protein; Cell wall; Genome; Computational biology; Cellulose; Chemistry; Chromatography; Peptide sequence","retraction":null,"screen_n_in":null,"score":{"opus":0.0634762895249244,"gpt":0.2643588080951739,"spread":0.2008825185702495,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009862967,0.00009167496,0.00008294264,0.00002609174,0.00008603552,0.00002251507,0.00005790611,0.00009142597,0.00001119876],"category_scores_gemma":[0.00002308441,0.00006419096,0.00001939287,0.00005971725,0.0000811297,0.000001238158,0.00005611506,0.00005204072,0.000003086054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002433773,"about_ca_system_score_gemma":0.00001386667,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001030593,"about_ca_topic_score_gemma":0.000002602949,"domain_scores_codex":[0.9994265,0.00004119896,0.0001128247,0.0002559167,0.00003491695,0.0001286185],"domain_scores_gemma":[0.9997559,0.000008145369,0.00002537428,0.0001092722,0.00003228395,0.00006906626],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004363304,0.0002539855,0.1238959,0.00002806185,0.0002054277,0.000003296896,0.0005685141,0.001660225,0.6868667,0.05028674,0.00446228,0.1313326],"study_design_scores_gemma":[0.0009770236,0.002584551,0.7456897,0.000007871779,0.00006581339,0.0002523002,0.0001542969,0.008166609,0.02469936,0.005929593,0.2108162,0.0006566187],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991471,0.001013485,0.002101816,0.004947102,0.00006766299,0.0001031194,0.00002154947,0.000006187679,0.0002680753],"genre_scores_gemma":[0.9965152,0.0002338031,0.000932338,0.00169235,0.0002577085,0.000005760646,0.0001689525,0.000005037418,0.0001888507],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6621673,"threshold_uncertainty_score":0.2617632,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2239811211","doi":"10.1021/bi900515d","title":"Understanding How Diverse β-Mannanases Recognize Heterogeneous Substrates","year":2009,"lang":"en","type":"article","venue":"Biochemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Mannose; Glycosidic bond; Chemistry; Glycoside hydrolase; Glucomannan; Bacillus subtilis; Biochemistry; Enzyme; Polysaccharide; Hydrolase; Stereochemistry; Biology; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.0577567573330485,"gpt":0.2496572020096183,"spread":0.1919004446765698,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000516486,0.0001420115,0.000084176,0.00001946721,0.00009663113,0.00005595381,0.0001115527,0.0001425505,0.00004328259],"category_scores_gemma":[0.00005774217,0.0001481228,0.00006820436,0.00007093597,0.0000441045,0.00000537184,0.0000249159,0.00005635889,0.00000576817],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002908795,"about_ca_system_score_gemma":0.00003082381,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":5.944147e-7,"about_ca_topic_score_gemma":0.000001289433,"domain_scores_codex":[0.9992671,0.00001446013,0.000101644,0.0003397866,0.00009330039,0.0001836915],"domain_scores_gemma":[0.9995492,0.00000259622,0.00006894927,0.0002493691,0.00004946729,0.00008048062],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000353969,0.00004146927,0.0003647382,0.00001107589,0.0000169344,0.00000444998,0.000009721193,0.000006785634,0.9942271,0.0000166842,0.004705233,0.0005604432],"study_design_scores_gemma":[0.000220398,0.00008013479,0.0003031731,0.00001056024,0.00001150004,0.00003849488,0.000138416,0.00001459344,0.9947765,0.00007647745,0.004137373,0.0001923966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963315,0.0003597522,0.0009350487,0.001057719,0.0001481103,0.00007068211,0.00002077678,0.00004503246,0.001031406],"genre_scores_gemma":[0.9965431,0.000178018,0.0001439382,0.0003391197,0.0004400031,0.000003451629,0.0003988289,0.00001176524,0.001941752],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009103453,"threshold_uncertainty_score":0.6040274,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1871508037","doi":"10.1074/jbc.m115.657916","title":"Functional Diversity of Haloacid Dehalogenase Superfamily Phosphatases from Saccharomyces cerevisiae","year":2015,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Regina; Structural Genomics Consortium; University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Dehalogenase; SUPERFAMILY; Saccharomyces cerevisiae; Phosphatase; Diversity (politics); Computational biology; Biology; Enzyme; Biochemistry; Yeast; Gene; Political science","retraction":null,"screen_n_in":null,"score":{"opus":0.04757363889759306,"gpt":0.2372723862021634,"spread":0.1896987473045704,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001958814,0.0001098492,0.0001934007,0.00001332609,0.00004422386,0.00000874611,0.0001806286,0.0001671883,0.0002076813],"category_scores_gemma":[0.0003032852,0.00008282978,0.0001250946,0.000055968,0.0001000406,0.000009679491,0.0001616594,0.0001085301,0.000004002489],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000183574,"about_ca_system_score_gemma":0.00006854742,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007177169,"about_ca_topic_score_gemma":3.919047e-7,"domain_scores_codex":[0.9992099,0.00003916484,0.0003101339,0.0001694313,0.0001708269,0.0001005311],"domain_scores_gemma":[0.9991058,0.00001499532,0.0002956118,0.0001365272,0.0003106915,0.0001363716],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003694804,0.0001216045,0.04353805,0.00001048764,0.00006021776,0.000005674748,0.00001610966,0.00001614067,0.9515855,0.000002699153,0.003922331,0.0003516857],"study_design_scores_gemma":[0.0006065511,0.0001938123,0.01992471,0.00001439721,0.00002406623,0.00004888835,0.000164716,0.000001717425,0.9732239,0.00009436667,0.00560378,0.00009908784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962851,0.00271717,0.0004119868,0.0001319278,0.0001813955,0.00002718047,0.0001087243,0.000004450839,0.0001320116],"genre_scores_gemma":[0.9979583,0.0004656731,0.0003733453,0.000110821,0.0006430158,6.527538e-7,0.0003678319,0.000004567399,0.00007581084],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02361334,"threshold_uncertainty_score":0.33777,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1882026650","doi":"10.1074/jbc.m115.679050","title":"Sph3 Is a Glycoside Hydrolase Required for the Biosynthesis of Galactosaminogalactan in Aspergillus fumigatus","year":2015,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; McGill University; Hospital for Sick Children; University of Toronto","funders":"National Center for Research Resources; National Institute of General Medical Sciences; Canadian Institutes of Health Research; Cystic Fibrosis Canada","keywords":"Aspergillus fumigatus; Glycoside hydrolase; Virulence; Hydrolase; Biology; Gene cluster; Biochemistry; Microbiology; Mutagenesis; Gene; Mutant; Aspergillus; Fungal protein; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.03965432157623142,"gpt":0.2682614369875269,"spread":0.2286071154112955,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004394781,0.0001141039,0.0002053283,0.00002001057,0.00002354516,0.00001015101,0.0002148193,0.0002015163,0.0000331541],"category_scores_gemma":[0.0008944233,0.00007047716,0.0001517306,0.00008942866,0.0001028923,0.000006353462,0.00004515288,0.0001136365,5.971449e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002532055,"about_ca_system_score_gemma":0.00008619158,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001791228,"about_ca_topic_score_gemma":7.53702e-7,"domain_scores_codex":[0.9991137,0.00003681413,0.0004241859,0.0001598361,0.0001205623,0.000144864],"domain_scores_gemma":[0.9991001,0.00004636333,0.0003624113,0.0001855675,0.0002139126,0.00009163097],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006511984,0.00009839214,0.004507153,0.00001875152,0.00003808786,0.000002377815,0.00003658942,0.00001337979,0.9930848,0.000003091725,0.0007922146,0.0007539383],"study_design_scores_gemma":[0.0007073643,0.0002694144,0.002689222,0.00002022458,0.00001882042,0.00006597823,0.000180605,0.00004026643,0.9838637,0.0000749015,0.01197964,0.00008984272],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972641,0.0009280918,0.000325377,0.001073824,0.0001124366,0.00008308177,0.00002088924,0.000002831574,0.000189362],"genre_scores_gemma":[0.99863,0.0003655584,0.0002823903,0.0001702879,0.000385272,0.000005104384,0.00001985057,0.000007883559,0.0001335791],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01118743,"threshold_uncertainty_score":0.2873975,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2102918226","doi":"10.1074/jbc.m410113200","title":"Family 6 Carbohydrate Binding Modules Recognize the Non-reducing End of β-1,3-Linked Glucans by Presenting a Unique Ligand Binding Surface","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"","keywords":"Laminarin; Carbohydrate-binding module; Binding site; Ligand (biochemistry); Affinities; Chemistry; Biochemistry; Structural similarity; Stereochemistry; Enzyme; Glycoside hydrolase; Hydrolase; Polysaccharide; Receptor","retraction":null,"screen_n_in":null,"score":{"opus":0.01817487877675319,"gpt":0.24700015333292,"spread":0.2288252745561668,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004525046,0.0001584125,0.0002303985,0.00001946065,0.0001031185,0.00003114622,0.0002554145,0.0002352917,0.0000107147],"category_scores_gemma":[0.0002511314,0.0001061368,0.0001416057,0.0001487312,0.0001392315,0.00001116101,0.00008122932,0.0002662577,7.986651e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003188825,"about_ca_system_score_gemma":0.00008474738,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001127407,"about_ca_topic_score_gemma":4.316994e-7,"domain_scores_codex":[0.9988818,0.00004974244,0.0004939037,0.0002263714,0.0001427548,0.0002054581],"domain_scores_gemma":[0.9989572,0.00002667575,0.0005868982,0.0001706096,0.0001794723,0.00007918387],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005723369,0.00006610775,0.001321571,0.00002985901,0.00006311408,0.000003095987,0.0000621817,0.0004418197,0.9976404,0.000001049925,0.0001256847,0.0001878593],"study_design_scores_gemma":[0.0004189834,0.00009636465,0.0009553361,0.00007390035,0.0000211173,0.0000518019,0.0002538903,0.00002222069,0.9974208,0.00002933759,0.0005269184,0.0001293295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982084,0.0004734556,0.0005149053,0.0003781993,0.0001472344,0.00007848282,0.00002727245,0.000006415384,0.0001656583],"genre_scores_gemma":[0.9980346,0.000801147,0.0005216476,0.00004906105,0.0003377312,0.000001854502,0.00007406379,0.00001326152,0.0001666344],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000419599,"threshold_uncertainty_score":0.4328135,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1987383794","doi":"10.1046/j.1365-2958.2000.01832.x","title":"Sequence and expression of a halobacterial β‐galactosidase gene","year":2000,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Smiths Detection (Canada)","funders":"Australian Research Council","keywords":"Biology; Biochemistry; Haloferax volcanii; Peptide sequence; Amino acid; Gene; Open reading frame; Molecular biology; Nucleic acid sequence; Plasmid","retraction":null,"screen_n_in":null,"score":{"opus":0.005451805269067422,"gpt":0.2145329908283511,"spread":0.2090811855592837,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005486532,0.0001008856,0.0001104976,0.00002416759,0.00002831753,0.000006477772,0.00007520202,0.0001360023,0.0001640927],"category_scores_gemma":[0.00001648617,0.00009693203,0.00003555657,0.00004051178,0.0001072527,0.000003046853,0.00004107938,0.00004081836,0.000007682307],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003683296,"about_ca_system_score_gemma":0.00001781824,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003580896,"about_ca_topic_score_gemma":7.510026e-7,"domain_scores_codex":[0.9993488,0.00007711204,0.0001519091,0.0002758135,0.00002055446,0.0001258216],"domain_scores_gemma":[0.9996666,0.000001859273,0.00005395783,0.0002047452,0.00003630998,0.00003651247],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000103329,0.00002676689,0.0002108607,0.000008611833,0.000009427074,0.000002569832,0.00002302027,0.000004053704,0.9980695,0.00001415305,0.0001049398,0.001422801],"study_design_scores_gemma":[0.0003304316,0.0001190162,0.0003093729,0.000006783129,0.000006834556,0.0001170881,0.00000359501,0.000001521433,0.9783523,0.00001113572,0.02064215,0.00009976482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983615,0.0003064454,0.0008649555,0.00009911504,0.00007287365,0.00009261034,0.00004238497,0.00000862512,0.0001514472],"genre_scores_gemma":[0.9978515,0.0001767863,0.0008459529,0.0002793591,0.00006631629,0.000006471973,0.0005062859,0.000011838,0.0002555055],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02053721,"threshold_uncertainty_score":0.3952774,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2168568729","doi":"10.1016/j.jmb.2003.07.014","title":"Temperature Adaptation of Proteins: Engineering Mesophilic-like Activity and Stability in a Cold-adapted α-Amylase","year":2003,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"European Commission; Polar Knowledge Canada","keywords":"Psychrophile; Cooperativity; Chemistry; Mesophile; Enthalpy; Mutant; Kinetics; Enzyme; Thermodynamics; Molecular dynamics; Thermostability; Crystallography; Amylase; Biophysics; Biochemistry; Computational chemistry; Biology; Genetics; Gene; Physics","retraction":null,"screen_n_in":null,"score":{"opus":0.007986421617780067,"gpt":0.2268276175106161,"spread":0.218841195892836,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003403896,0.00009332298,0.0001727176,0.00008508717,0.00001319017,0.000004647697,0.00005160705,0.000154511,0.000006194606],"category_scores_gemma":[0.0003131111,0.00008581125,0.00004881436,0.0001071345,0.0000368668,0.00000768135,0.000016567,0.0001312523,9.788943e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001171967,"about_ca_system_score_gemma":0.00007698982,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004544514,"about_ca_topic_score_gemma":0.000008486442,"domain_scores_codex":[0.9992681,0.0001701546,0.0002550829,0.0001481022,0.00006121967,0.00009735792],"domain_scores_gemma":[0.9994746,0.000007197963,0.0002036092,0.0001195263,0.0001527152,0.00004232402],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000105716,0.00007953562,0.001330508,0.00002535373,0.00002644856,0.000003893934,0.000042144,0.000199416,0.9976531,0.0002444283,0.000003108104,0.0002863055],"study_design_scores_gemma":[0.0006089554,0.0003956172,0.00225734,0.00001549741,0.000009410278,0.00005141833,0.00004730603,0.00005536604,0.9954095,0.00003414847,0.0010377,0.00007771283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930922,0.000876483,0.005656742,0.0001166832,0.00009928016,0.0001397698,0.00000489417,0.000002026939,0.00001196056],"genre_scores_gemma":[0.9982725,0.0001274232,0.001498403,0.00004279126,0.00003249016,0.000004681019,0.000008373652,0.000008513822,0.000004828144],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005180335,"threshold_uncertainty_score":0.3499281,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2097018673","doi":"10.1002/chem.200801578","title":"Total Syntheses of Casuarine and Its 6‐<i>O</i>‐α‐Glucoside: Complementary Inhibition towards Glycoside Hydrolases of the GH31 and GH37 Families","year":2009,"lang":"en","type":"article","venue":"Chemistry - A European Journal","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"National Center for Research Resources; Biotechnology and Biological Sciences Research Council; Ministero dell’Istruzione, dell’Università e della Ricerca; Ente Cassa di Risparmio di Firenze","keywords":"Glucoside; Glycoside hydrolase; Trehalase; Stereochemistry; Enzyme; Stereoselectivity; Chemistry; Cycloaddition; Glycoside; Nitrone; Biochemistry; Catalysis","retraction":null,"screen_n_in":null,"score":{"opus":0.01126679893742916,"gpt":0.2157898204139954,"spread":0.2045230214765663,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001787393,0.0001086207,0.0001124161,0.00001542825,0.00008817035,0.00001944652,0.00007355034,0.00002477815,0.00003438942],"category_scores_gemma":[0.0001116394,0.00008592074,0.00004829976,0.00004720197,0.0000858095,0.00001073181,0.0000845389,0.0001013792,2.096471e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005625802,"about_ca_system_score_gemma":0.00002448694,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000140602,"about_ca_topic_score_gemma":2.920554e-7,"domain_scores_codex":[0.9992996,0.00007499677,0.0002688748,0.0001524197,0.0001073498,0.00009677222],"domain_scores_gemma":[0.9995106,0.000005430745,0.0002095328,0.0001269183,0.0000910919,0.00005637536],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005742904,0.00004385994,0.0004320466,0.00005142574,0.00002031798,0.000003212208,0.00006725106,0.00001142206,0.9959959,0.000003017173,0.0001634421,0.003150625],"study_design_scores_gemma":[0.0003597697,0.0001079316,0.01718507,0.00008648142,0.00002595654,0.0006641483,0.0001454448,0.00005791419,0.9803253,0.000009765004,0.000944723,0.00008749295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979389,0.0007430621,0.00003310379,0.0004486285,0.00004287109,0.00005088944,0.00003000046,0.000004161208,0.0007083928],"genre_scores_gemma":[0.9987378,0.0007068747,0.00007435057,0.0001177584,0.0001966143,4.424057e-7,0.00002809162,0.000009806693,0.0001282611],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01675302,"threshold_uncertainty_score":0.3503746,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1641498977","doi":"10.51847/x86lwld","title":"10.51847/X86lwLD","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":99,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"Council of Scientific and Industrial Research, India","keywords":"Bromocresol green; Bromocresol purple; Agar; Substrate (aquarium); Chromatography; Chemistry; Protease; Casein; Agar plate; Reagent; Bacteria; Food science; Biochemistry; Biology; Enzyme; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.003970819333777723,"gpt":0.1794296784070888,"spread":0.1754588590733111,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00003972015,0.00006115773,0.00004538863,0.00001580817,0.00003297911,0.00001307589,0.00006841003,0.00004718658,0.9234859],"category_scores_gemma":[0.0000166143,0.0000627091,0.00002113764,0.00006389985,0.00001089281,0.00000197486,0.00001654823,0.00002321958,0.7861218],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003574602,"about_ca_system_score_gemma":0.00001131672,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001131378,"about_ca_topic_score_gemma":4.246402e-8,"domain_scores_codex":[0.9996035,0.00001481336,0.00007188592,0.0001654422,0.00004831891,0.00009603605],"domain_scores_gemma":[0.9997241,9.278139e-7,0.00001242949,0.0001763094,0.00003378331,0.00005241498],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008327223,0.00003535302,9.267109e-7,0.000002701411,0.00001088932,4.584455e-7,0.000004231991,0.00003769757,0.2903494,7.804594e-7,0.05404214,0.6554322],"study_design_scores_gemma":[0.00009156048,0.00008838427,0.00008533642,0.000001849585,0.000003381726,0.000005109375,2.783185e-7,0.000009724497,0.03149194,2.940419e-7,0.9681394,0.0000827796],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.03724933,0.00005471172,0.000008164646,0.0005587055,0.000006202315,0.0001035988,0.000009908284,0.00003578001,0.9619736],"genre_scores_gemma":[0.00379957,0.000002044322,0.00006064382,0.0001950243,0.0002734899,0.000008210745,0.0001708123,0.00001182192,0.9954784],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.9140972,"threshold_uncertainty_score":0.2557203,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}