{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":1401,"total_is_capped":false,"direct_labels_cover":3,"predictions_cover":1401,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"4324f3e39426","filters":{"topic":"Helicobacter pylori-related gastroenterology studies"}},"results":[{"id":"W2609752905","doi":"10.1053/j.gastro.2017.04.022","title":"Global Prevalence of Helicobacter pylori Infection: Systematic Review and Meta-Analysis","year":2017,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":3368,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Meta-analysis; Medicine; Helicobacter pylori; Confidence interval; Helicobacter pylori infection; Epidemiology; Internal medicine; Prevalence; MEDLINE; Demography; Biology","authors":[{"name":"James K.Y. Hooi","is_ca":false},{"name":"Wan Ying Lai","is_ca":false},{"name":"Wee Khoon Ng","is_ca":false},{"name":"Michael M.Y. Suen","is_ca":false},{"name":"Fox E. Underwood","is_ca":true},{"name":"Divine Tanyingoh","is_ca":true},{"name":"Peter Malfertheiner","is_ca":false},{"name":"David Y. Graham","is_ca":false},{"name":"Vincent Wai‐Sun Wong","is_ca":false},{"name":"Justin CY Wu","is_ca":false},{"name":"Francis K.L. Chan","is_ca":false},{"name":"Joseph J.�Y. Sung","is_ca":false},{"name":"Gilaad G. Kaplan","is_ca":true},{"name":"Siew C. Ng","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0958747034495746,"gpt":0.3714309299377027,"spread":0.2755562264881281,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.0009839103,0.0010726,0.02052388,0.0005189097,0.0001277777,0.00002676532,0.0005213018,0.0005504884,0.000260195],"category_scores_gemma":[0.000559148,0.0007258348,0.004593146,0.0004785597,0.0006672731,0.0001266594,0.0005515098,0.0006539981,0.00005372127],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001699388,"about_ca_system_score_gemma":0.00009388971,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004085693,"about_ca_topic_score_gemma":0.0001186209,"domain_scores_codex":[0.9938655,0.001236522,0.002610944,0.001139121,0.0003646145,0.0007833384],"domain_scores_gemma":[0.9939244,0.0001199002,0.002970508,0.002237747,0.0004541348,0.0002933366],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.00002582102,0.00008080184,0.01184524,0.6393287,0.3482142,0.00003811334,0.000007573899,7.978201e-8,1.030347e-8,0.000003579899,0.0001970028,0.0002588805],"study_design_scores_gemma":[0.0003541537,0.0008758274,0.00380499,0.0330907,0.9480043,0.001824823,9.978208e-7,4.066813e-7,1.909967e-8,0.000002139192,0.01186497,0.0001766578],"study_design_candidate":"meta_analysis","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00006475007,0.994583,0.0001078515,0.0007785996,0.0001811558,0.003509694,0.0006223007,0.00006955068,0.00008313339],"genre_scores_gemma":[0.0001604646,0.9965211,0.0001378736,0.001293378,0.00006305046,0.0009967908,0.0001139622,0.00004943573,0.0006639761],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.606238,"threshold_uncertainty_score":0.9995193,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2527848138","doi":"10.1136/gutjnl-2016-312288","title":"Management of <i>Helicobacter pylori</i> infection—the Maastricht V/Florence Consensus Report","year":2016,"lang":"en","type":"article","venue":"Gut","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":2924,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Helicobacter pylori; Helicobacter Infections; Medicine; Consensus conference; Gastroenterology; Helicobacter pylori infection; Internal medicine","authors":[{"name":"Peter Malfertheiner","is_ca":false},{"name":"Françis Mégraud","is_ca":false},{"name":"Colm O’Morain","is_ca":false},{"name":"Javier P. Gisbert","is_ca":false},{"name":"Ernst J. Kuipers","is_ca":false},{"name":"Anthony Axon","is_ca":false},{"name":"Franco Bazzoli","is_ca":false},{"name":"Antonio Gasbarrini","is_ca":false},{"name":"J. Atherton","is_ca":false},{"name":"David Y. Graham","is_ca":false},{"name":"Richard H. Hunt","is_ca":true},{"name":"Paul Moayyedi","is_ca":true},{"name":"Theodore Rokkas","is_ca":false},{"name":"Massimo Rugge","is_ca":false},{"name":"Michael Selgrad","is_ca":false},{"name":"Sebastian Suerbaum","is_ca":false},{"name":"Kentaro Sugano","is_ca":false},{"name":"Emad El‐Omar","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01991246471247276,"gpt":0.2662577525389688,"spread":0.246345287826496,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003011113,0.0001804463,0.0003048697,0.00008981482,0.00007776507,0.00000549343,0.0001024832,0.00008264616,0.0001003131],"category_scores_gemma":[0.0001150914,0.00009753046,0.0001065223,0.000252619,0.0003631318,0.00003840723,0.0001438873,0.0001566984,0.0001972083],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007255395,"about_ca_system_score_gemma":0.00003278153,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004226125,"about_ca_topic_score_gemma":0.00001118402,"domain_scores_codex":[0.9985044,0.00005308263,0.0005140624,0.0003134138,0.0002725052,0.0003425245],"domain_scores_gemma":[0.9987301,0.00009086874,0.0002234304,0.0006298643,0.0002368996,0.00008889517],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002784952,0.0001536827,0.9485726,0.00008483874,0.001402581,0.001237321,0.0001241148,0.000001117916,0.005892397,0.0002582417,0.01675595,0.02523865],"study_design_scores_gemma":[0.00174216,0.0002771011,0.9270431,0.0002486786,0.0003833924,0.001152837,0.00004296381,0.000001521077,0.001554844,0.00005934028,0.06739256,0.0001014872],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9741418,0.0001173091,0.0006507537,0.01489057,0.0007993098,0.0004211944,0.00001395671,0.0001000434,0.008865032],"genre_scores_gemma":[0.9937379,0.0003304058,0.0005191795,0.0006071941,0.0001516804,0.00005397562,0.000005406775,0.00002029454,0.004573938],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05063661,"threshold_uncertainty_score":0.3977177,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2101730203","doi":"10.1136/gut.2006.101634","title":"Current concepts in the management of Helicobacter pylori infection: the Maastricht III Consensus Report","year":2006,"lang":"en","type":"article","venue":"Gut","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":2248,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Otto von Guericke University Magdeburg; Erasmus+; Erasmus Universitair Medisch Centrum Rotterdam; Erasmus Medisch Centrum; Trinity College Dublin; Cilag; Università di Bologna; Institut National de la Santé et de la Recherche Médicale; University of Aberdeen; McMaster University; AstraZeneca","keywords":"Medicine; Helicobacter pylori; Internal medicine; Gastroenterology; Urea breath test; Atrophic gastritis; Disease; Cancer; Gastritis; Proton-pump inhibitor; Peptic; Thrombocytopenic purpura; Helicobacter pylori infection; Peptic ulcer","authors":[{"name":"Peter Malfertheiner","is_ca":false},{"name":"Françis Mégraud","is_ca":false},{"name":"C O'Morain","is_ca":false},{"name":"Franco Bazzoli","is_ca":false},{"name":"Emad El‐Omar","is_ca":false},{"name":"David Graham","is_ca":false},{"name":"R H Hunt","is_ca":true},{"name":"Theodoros Rokkas","is_ca":false},{"name":"Nimish Vakil","is_ca":false},{"name":"Ernst J. Kuipers","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02183678651002067,"gpt":0.3027944438526978,"spread":0.2809576573426771,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005009909,0.0001726516,0.0002877004,0.00008961271,0.00008265056,0.0000102649,0.000119197,0.00006211022,0.00003028903],"category_scores_gemma":[0.00002507548,0.00009794238,0.00009806773,0.0003782038,0.000277791,0.00002396179,0.0000909368,0.000360461,0.00003593605],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006671525,"about_ca_system_score_gemma":0.00002514757,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002685319,"about_ca_topic_score_gemma":0.0001206594,"domain_scores_codex":[0.9984385,0.0001152778,0.0005856776,0.0002508997,0.0002982026,0.0003114468],"domain_scores_gemma":[0.9990504,0.00007742793,0.0002067753,0.0005123846,0.0001236645,0.00002935685],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001893862,0.0003930357,0.9705879,0.0001028674,0.0004673648,0.0008544057,0.0006199741,0.00002692514,0.0001510149,0.0006784306,0.02045691,0.005471805],"study_design_scores_gemma":[0.001790899,0.0001369934,0.9200435,0.0001220808,0.0002526866,0.000572024,0.0002573041,0.000008578863,0.0000700235,0.00006412009,0.07661548,0.00006631126],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9838923,0.000758286,0.00007360559,0.006971569,0.0006993833,0.0006831346,0.00000543832,0.00003792332,0.006878408],"genre_scores_gemma":[0.9984317,0.0002223221,0.00007296555,0.0004204314,0.0002474071,0.00008671804,0.00002454929,0.000011756,0.0004821577],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05615857,"threshold_uncertainty_score":0.3993974,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2183787411","doi":"10.1136/gutjnl-2015-309252","title":"Kyoto global consensus report on<i>Helicobacter pylori</i>gastritis","year":2015,"lang":"en","type":"review","venue":"Gut","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":1776,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Changi General Hospital; Universidade Federal de Minas Gerais; Hokkaido University; Hirosaki University; Hyogo College of Medicine; Università di Bologna; Astellas Pharma; Chulalongkorn University; National Institute of Diabetes and Digestive and Kidney Diseases; Universiti Malaya; Daiichi Sankyo Europe; Seoul National University Bundang Hospital; Seoul National University; Chinese University of Hong Kong; Keio University; Kawasaki Medical School; Eisai; University of Toyama; National Taiwan University; Institut National de la Santé et de la Recherche Médicale; McMaster University; Università degli Studi di Parma; AstraZeneca","keywords":"Duodenitis; Helicobacter pylori; Gastritis; Medicine; Consensus conference; Chronic gastritis; Gastroenterology; Internal medicine; Grading (engineering); Atrophic gastritis; Biology","authors":[{"name":"Kentaro Sugano","is_ca":false},{"name":"Jan Tack","is_ca":false},{"name":"Ernst J. Kuipers","is_ca":false},{"name":"David Y. Graham","is_ca":false},{"name":"Emad El‐Omar","is_ca":false},{"name":"Soichiro Miura","is_ca":false},{"name":"Ken Haruma","is_ca":false},{"name":"Masahiro Asaka","is_ca":false},{"name":"Naomi Uemura","is_ca":false},{"name":"Peter Malfertheiner","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07087106802256837,"gpt":0.3586713313140536,"spread":0.2878002632914852,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000656797,0.00114711,0.004378057,0.0002554077,0.0001177457,0.0000461624,0.0003580231,0.00102159,0.00009975165],"category_scores_gemma":[0.0008996177,0.000921755,0.0008979145,0.0006229419,0.000408915,0.00004239114,0.0003292238,0.001456147,0.002929509],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001135998,"about_ca_system_score_gemma":0.001071032,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006785817,"about_ca_topic_score_gemma":0.00002647143,"domain_scores_codex":[0.9946386,0.0003059725,0.001777574,0.001324394,0.0008019971,0.001151451],"domain_scores_gemma":[0.9960291,0.0001416708,0.0008005374,0.001659066,0.0006357367,0.0007338813],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002037131,0.0003621093,0.004506786,0.004829872,0.003912963,0.02336577,0.0000348936,1.67851e-7,3.649812e-7,0.00005237895,0.2517718,0.7109591],"study_design_scores_gemma":[0.001450125,0.0008260141,0.001071391,0.009245441,0.003440471,0.02486767,0.00001429147,2.158651e-7,1.6563e-7,0.0000185428,0.9586231,0.0004425344],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0003473668,0.9738591,0.000005548825,0.001520683,0.002692253,0.001925639,0.0007182125,0.0003940095,0.01853721],"genre_scores_gemma":[0.00002799904,0.9912069,0.0004901933,0.001483941,0.001600918,0.0003026874,0.0008891671,0.000150202,0.003847923],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7105166,"threshold_uncertainty_score":0.9993233,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2570938003","doi":"10.1038/ajg.2016.563","title":"ACG Clinical Guideline: Treatment of Helicobacter pylori Infection","year":2017,"lang":"en","type":"article","venue":"The American Journal of Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":1591,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Clarithromycin; Levofloxacin; Helicobacter pylori; Metronidazole; Internal medicine; Salvage therapy; Regimen; Amoxicillin; Gastroenterology; Antibiotics; Surgery; Chemotherapy","authors":[{"name":"William D. Chey","is_ca":false},{"name":"Grigorios I. Leontiadis","is_ca":true},{"name":"Colin W. Howden","is_ca":false},{"name":"Steven F. Moss","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0399599256261458,"gpt":0.3633447770325422,"spread":0.3233848514063964,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000985748,0.0002731229,0.001604229,0.0001934573,0.0001906121,0.00001813892,0.0003970187,0.0000745847,0.00003335161],"category_scores_gemma":[0.0004113785,0.0001618985,0.0005742417,0.00007273886,0.002160098,0.0001275418,0.000131518,0.0004518119,0.00001670785],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001117357,"about_ca_system_score_gemma":0.00008575129,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001496554,"about_ca_topic_score_gemma":0.00008590191,"domain_scores_codex":[0.9969265,0.0004921283,0.00163165,0.0002313576,0.0002488701,0.0004694288],"domain_scores_gemma":[0.9946457,0.000134045,0.003431575,0.0008927793,0.000682255,0.0002136361],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01764718,0.0005825699,0.9579143,0.000005115277,0.002075074,0.00009511911,0.0002030896,0.000008272074,0.0006736939,0.000003148937,0.001332527,0.01945991],"study_design_scores_gemma":[0.0047467,0.07383672,0.9121599,0.00004799998,0.0008195713,0.00228234,0.0001108911,0.00001996042,0.000170148,0.00002068345,0.005731863,0.00005319546],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9770716,0.00006805903,0.0007399629,0.02079005,0.001033709,0.0001862231,0.000007953273,0.0000139166,0.00008856492],"genre_scores_gemma":[0.9942949,0.001590679,0.00124901,0.001746441,0.001011513,0.00000624757,0.00000287612,0.0000279436,0.00007032156],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07325415,"threshold_uncertainty_score":0.7958972,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4291016468","doi":"10.1136/gutjnl-2022-327745","title":"Management of <i>Helicobacter pylori</i> infection: the Maastricht VI/Florence consensus report","year":2022,"lang":"en","type":"article","venue":"Gut","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":1352,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Population Health Research Institute","funders":"","keywords":"Helicobacter pylori; Medicine; Context (archaeology); Atrophic gastritis; Intensive care medicine; Disease; Gastritis; Antibiotic resistance; Consensus conference; Cancer; Immunology; Antibiotics; Internal medicine; Biology","authors":[{"name":"Peter Malfertheiner","is_ca":false},{"name":"Françis Mégraud","is_ca":false},{"name":"Theodore Rokkas","is_ca":false},{"name":"Javier P. Gisbert","is_ca":false},{"name":"Jyh‐Ming Liou","is_ca":false},{"name":"Christian Schulz","is_ca":false},{"name":"Antonio Gasbarrini","is_ca":false},{"name":"Richard H. Hunt","is_ca":true},{"name":"Mārcis Leja","is_ca":false},{"name":"Colm O’Morain","is_ca":false},{"name":"Massimo Rugge","is_ca":false},{"name":"Sebastian Suerbaum","is_ca":false},{"name":"Herbert Tilg","is_ca":false},{"name":"Kentaro Sugano","is_ca":false},{"name":"Emad El‐Omar","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02052510599325758,"gpt":0.2650375087008848,"spread":0.2445124027076272,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004473888,0.0001695253,0.0003007799,0.00009856281,0.0002562905,0.000006961252,0.0001383927,0.00004160877,0.0003329733],"category_scores_gemma":[0.00004416199,0.0001279663,0.0001162097,0.000460484,0.0002190729,0.00002390834,0.0004195891,0.0004351188,0.00004276145],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001127587,"about_ca_system_score_gemma":0.000043833,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006785603,"about_ca_topic_score_gemma":0.000007295871,"domain_scores_codex":[0.9983389,0.0001074841,0.0004983335,0.0003190604,0.0004184475,0.0003177446],"domain_scores_gemma":[0.9988744,0.00005694108,0.0002396002,0.000620971,0.0001408201,0.00006724161],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007952505,0.0005332166,0.9245012,0.0001817547,0.003106311,0.005765622,0.0008288198,0.0001599922,0.001779986,0.0005089025,0.0479675,0.01387147],"study_design_scores_gemma":[0.001584471,0.0006144248,0.7959893,0.00004536756,0.000546099,0.003390538,0.0004630408,0.00002226232,0.0002703638,0.00004458521,0.196904,0.0001255945],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9697104,0.0002632825,0.0001072279,0.01048138,0.001343178,0.0005886782,0.00003227852,0.0001045198,0.01736905],"genre_scores_gemma":[0.9948862,0.0001208822,0.0003092171,0.001548818,0.0001279707,0.0001652733,0.00002466639,0.00002072478,0.00279622],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1489365,"threshold_uncertainty_score":0.5218316,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2120472610","doi":"10.1073/pnas.0506655103","title":"Molecular analysis of the bacterial microbiota in the human stomach","year":2006,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":1139,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Office of Naval Research; Ellison Medical Foundation; York University; National Cancer Institute; Advanced Research Projects Agency; National Institutes of Health; National Science Foundation","keywords":"Fusobacteria; Biology; Phylotype; Bacteroidetes; Proteobacteria; Firmicutes; Actinobacteria; Helicobacter pylori; Microbiology; Library; Pyrosequencing; Human stomach; Stomach; 16S ribosomal RNA; Genetics; Bacteria; Gene","authors":[{"name":"Elisabeth M. Bik","is_ca":false},{"name":"Paul B. Eckburg","is_ca":false},{"name":"Steven R. Gill","is_ca":false},{"name":"Elizabeth Purdom","is_ca":false},{"name":"Fritz François","is_ca":false},{"name":"Martin J. Blaser","is_ca":false},{"name":"David A. Relman","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02392304892406675,"gpt":0.3019480490310439,"spread":0.2780250001069772,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001166053,0.00008779372,0.0002489056,0.0002805466,0.0001313298,0.000008904806,0.0007396981,0.00007473712,0.000007902092],"category_scores_gemma":[0.0002198568,0.00004173131,0.0001583462,0.002010441,0.001250673,0.00008750572,0.0001420927,0.0002131744,2.284006e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003172708,"about_ca_system_score_gemma":0.00001945405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000449203,"about_ca_topic_score_gemma":0.000002271514,"domain_scores_codex":[0.9984918,0.00002101685,0.000409532,0.0001789111,0.0007503442,0.0001483865],"domain_scores_gemma":[0.9992666,0.00006097354,0.00040791,0.00001834658,0.0002356432,0.00001055607],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001432718,0.00007117027,0.280111,0.00001512245,0.0001424246,1.241175e-8,0.000209906,0.00004313518,0.7163379,0.002740426,0.0003037851,0.00001081542],"study_design_scores_gemma":[0.0002815647,0.00004304806,0.8678053,0.0000450509,0.0002706982,0.000005109543,0.0001311842,0.00007423038,0.1302674,0.0009924312,0.00005596959,0.00002801943],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9881715,0.00005382689,1.426599e-7,0.009915311,0.00001559523,0.0001952533,0.00001546671,0.000003420417,0.001629474],"genre_scores_gemma":[0.9993169,0.000003894047,0.00009272531,0.0005022587,0.000039718,0.000006144682,5.091003e-7,0.000002505668,0.00003539373],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5876943,"threshold_uncertainty_score":0.4608156,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2336356383","doi":"10.1053/j.gastro.2016.04.006","title":"The Toronto Consensus for the Treatment of Helicobacter pylori Infection in Adults","year":2016,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":918,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Kelowna General Hospital; University of Toronto; SickKids Foundation; University of Alberta; Population Health Research Institute; McMaster University; Hospital for Sick Children; Guelph General Hospital; McGill University Health Centre","funders":"","keywords":"Rifabutin; Clarithromycin; Metronidazole; Helicobacter pylori; Medicine; Levofloxacin; Dosing; Internal medicine; Concomitant; Antibiotics","authors":[{"name":"Carlo A Fallone","is_ca":true},{"name":"Naoki Chiba","is_ca":true},{"name":"Sander Veldhuyzen van Zanten","is_ca":true},{"name":"Lori Fischbach","is_ca":false},{"name":"Javier P. Gisbert","is_ca":false},{"name":"Richard H. Hunt","is_ca":true},{"name":"Nicola L. Jones","is_ca":true},{"name":"Craig Render","is_ca":true},{"name":"Grigorios I. Leontiadis","is_ca":true},{"name":"Paul Moayyedi","is_ca":true},{"name":"John K. Marshall","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03035635916958584,"gpt":0.3189882247183736,"spread":0.2886318655487878,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003763065,0.000641704,0.002233612,0.0001317,0.0001604249,0.00001015868,0.0002386293,0.0004197535,0.00002645781],"category_scores_gemma":[0.0001697945,0.0002823639,0.0008499448,0.00009851631,0.000601156,0.00003142155,0.00008132288,0.0002758714,0.00002663683],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008300311,"about_ca_system_score_gemma":0.0001115102,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004092282,"about_ca_topic_score_gemma":0.01095706,"domain_scores_codex":[0.9965681,0.0004297722,0.001321235,0.0005893826,0.0001557665,0.0009356869],"domain_scores_gemma":[0.9968466,0.001258177,0.0006990348,0.0008693146,0.0002224986,0.0001043699],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.004764839,0.0005689308,0.04325235,0.00201004,0.004330251,0.00002568323,0.0003204826,2.913766e-7,0.000001548332,0.00002812724,0.001473017,0.9432244],"study_design_scores_gemma":[0.005240754,0.008829324,0.01320748,0.003745204,0.001738868,0.0003483732,0.00003696291,0.00000371774,0.000001110521,0.000006146507,0.9667335,0.0001085156],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01149893,0.9802759,0.00007114268,0.002141468,0.001833161,0.003900536,0.000183983,0.00004470339,0.00005013377],"genre_scores_gemma":[0.0006492147,0.9961255,0.00004513704,0.0001700678,0.0005503486,0.002035519,0.0000595984,0.00007223414,0.0002924427],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9652605,"threshold_uncertainty_score":0.9999629,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2155674292","doi":"10.1152/physrev.00004.2008","title":"Prostaglandins, NSAIDs, and Gastric Mucosal Protection: Why Doesn't the Stomach Digest Itself?","year":2008,"lang":"en","type":"review","venue":"Physiological Reviews","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":710,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Stomach; Medicine; Aspirin; Nitric oxide; Ingestion; Pharmacology; Gastric mucosa; Gastroenterology; Prostaglandin; Internal medicine","authors":[{"name":"John L. Wallace","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1217835445309694,"gpt":0.3433324984579456,"spread":0.2215489539269762,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004981334,0.001006499,0.004534747,0.0001486608,0.0003980036,0.00003379686,0.0003720027,0.0005531873,0.00006475498],"category_scores_gemma":[0.001116364,0.0004304417,0.0008811688,0.0007947331,0.000633866,0.00007394142,0.0004069062,0.002088177,0.0003319102],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001501491,"about_ca_system_score_gemma":0.0001025481,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001519566,"about_ca_topic_score_gemma":0.000003225168,"domain_scores_codex":[0.995194,0.001285935,0.00137121,0.001073313,0.0003092979,0.0007662328],"domain_scores_gemma":[0.997762,0.0002302845,0.0007674985,0.0008401307,0.0001224664,0.0002775967],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008356773,0.0003541836,0.0003491481,0.01093485,0.0007536134,0.00009044162,0.0000698333,3.992438e-8,0.00002835085,0.00002412854,0.05344853,0.9338633],"study_design_scores_gemma":[0.0004140762,0.001133881,0.002190748,0.005801707,0.001227593,0.001586696,0.000009107036,8.349264e-7,2.835475e-7,0.00001623728,0.9873154,0.0003034306],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002615875,0.9913114,0.00001624357,0.000788149,0.0002291276,0.007026383,0.00003881797,0.0001510203,0.000177321],"genre_scores_gemma":[0.00004471575,0.9945005,0.0001373094,0.001332419,0.0008468652,0.002612123,0.0001643287,0.00006135938,0.0003003952],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9338669,"threshold_uncertainty_score":0.9998147,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2339070543","doi":"10.1093/femsre/fuw007","title":"Lipopolysaccharide modification in Gram-negative bacteria during chronic infection","year":2016,"lang":"en","type":"review","venue":"FEMS Microbiology Reviews","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":676,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Trust; Fundação para a Ciência e a Tecnologia; Institute for Bioengineering and Biosciences; Cystic Fibrosis Canada","keywords":"Biology; Microbiology; Salmonella enterica; Pseudomonas aeruginosa; Bacteria; Pathogen; Bacterial outer membrane; Immune system; Lipopolysaccharide; Gram-negative bacteria; Innate immune system; Burkholderia; Antibiotic resistance; Antibiotics; Salmonella; Immunology; Gene; Escherichia coli; Genetics","authors":[{"name":"Rita F. Maldonado","is_ca":false},{"name":"Isabel Sá‐Correia","is_ca":false},{"name":"Miguel A. Valvano","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05657530841443294,"gpt":0.3423242347378561,"spread":0.2857489263234232,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007021429,0.0009046959,0.004635483,0.0006574441,0.0001107417,0.00001447447,0.0002525937,0.001079481,0.0002028758],"category_scores_gemma":[0.0004706,0.0005992785,0.0007525042,0.000428734,0.0003211345,0.0001181067,0.00020876,0.001222493,0.002582874],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001499247,"about_ca_system_score_gemma":0.0002463706,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005516133,"about_ca_topic_score_gemma":0.0001760011,"domain_scores_codex":[0.9948523,0.001109944,0.002082902,0.001094864,0.00004317843,0.0008167782],"domain_scores_gemma":[0.9974716,0.0001365684,0.001287256,0.0008673628,0.0001124179,0.0001247689],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006799104,0.0001755565,0.001533856,0.01931157,0.001015965,0.00003391004,0.0001351929,5.004861e-8,0.01496455,0.0000104117,0.001109586,0.9616414],"study_design_scores_gemma":[0.001004907,0.0002461334,0.00100019,0.04259829,0.0008711467,0.000889567,0.000001436194,1.080724e-7,0.00009540009,0.000004046181,0.9529178,0.0003709624],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.004850465,0.9898695,0.00002028343,0.0001818942,0.001064258,0.003734858,0.00009404194,0.0001091912,0.00007547309],"genre_scores_gemma":[0.00008252594,0.9964761,0.0001044966,0.00009012503,0.0006191838,0.001202619,0.0004684912,0.00009423769,0.0008621952],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9612704,"threshold_uncertainty_score":0.9996459,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2694232428","doi":"10.1038/ajg.2017.154","title":"ACG and CAG Clinical Guideline: Management of Dyspepsia","year":2017,"lang":"en","type":"review","venue":"The American Journal of Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":666,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"St. Paul's Hospital; University of Calgary; McMaster University; University of British Columbia; McMaster University Medical Centre","funders":"","keywords":"Medicine; Guideline; Internal medicine; Gastroenterology; Endoscopy; Proton-pump inhibitor; Helicobacter pylori; Cancer; Pathology","authors":[{"name":"Paul M Moayyedi","is_ca":true},{"name":"Brian E. Lacy","is_ca":false},{"name":"Christopher N. Andrews","is_ca":true},{"name":"Robert Enns","is_ca":true},{"name":"Colin W. Howden","is_ca":false},{"name":"Nimish Vakil","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09245062966446824,"gpt":0.431579159593177,"spread":0.3391285299287088,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.001926643,0.0005301696,0.006251093,0.0003424065,0.0001023736,0.00001486301,0.0008351466,0.0001544671,0.00001675438],"category_scores_gemma":[0.0001733966,0.000308229,0.001001231,0.0001278701,0.003030983,0.00005621474,0.0005929294,0.001562386,0.00001101448],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007302193,"about_ca_system_score_gemma":0.0001269982,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009448138,"about_ca_topic_score_gemma":0.000005039605,"domain_scores_codex":[0.9943082,0.001071372,0.003321497,0.0003792325,0.0003351144,0.0005845792],"domain_scores_gemma":[0.9908244,0.000216567,0.007281259,0.001005395,0.0004020013,0.000270348],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00426871,0.0002050186,0.0157741,0.001310137,0.01194608,0.0009991629,0.00006419013,3.97064e-7,3.900091e-7,0.000006950288,0.004444057,0.9609808],"study_design_scores_gemma":[0.002533258,0.03501927,0.01543622,0.009008118,0.0150715,0.02231463,0.0003780545,0.000001796501,1.354592e-7,0.00001628657,0.9000611,0.0001596255],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.04986298,0.9449979,0.0001659536,0.003382898,0.000825301,0.0005941642,0.00002899465,0.00001333428,0.0001284788],"genre_scores_gemma":[0.002515117,0.9932794,0.002553334,0.001081926,0.00042806,0.0000108685,0.000006752987,0.00006043479,0.00006411601],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9608212,"threshold_uncertainty_score":0.999937,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2981618459","doi":"10.1016/s2468-1253(19)30328-0","title":"The global, regional, and national burden of stomach cancer in 195 countries, 1990–2017: a systematic analysis for the Global Burden of Disease study 2017","year":2019,"lang":"en","type":"article","venue":"The Lancet. Gastroenterology & hepatology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":649,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Student Research Committee, Tabriz University of Medical Sciences; Sistema Nacional de Investigadores; Medical Research Council; Adigrat University; Universitair Ziekenhuis Antwerpen; Universitätsklinikum Heidelberg; Rede de Química e Tecnologia; Kurdistan University Of Medical Sciences; Western Sydney University; Lorestan University of Medical Sciences; Instituto De Saúde Pública, Universidade do Porto; Fakultet Medicinskih Nauka, Univerziteta U Kragujevcu; Mekelle University; Applied Molecular Biosciences Unit; Pomorski Uniwersytet Medyczny W Szczecinie; Tarbiat Modares University; Addis Ababa University; Arak University of Medical Sciences; University of Cape Town; Universidade do Porto; Centro de Investigación Biomédica en Red de Salud Mental; University of Dhaka; Debre Markos University; Qazvin University of Medical Sciences; Shahid Beheshti University of Medical Sciences; Kermanshah University of Medical Sciences; Shahrekord University of Medical Sciences; Baki Dövlət Universiteti; Queen Elizabeth Hospital Birmingham Charity; Birjand University of Medical Sciences; Bushehr University of Medical Sciences; Shahrekord University; Xiamen University; Bahir Dar University; Haramaya University; Shahroud University of Medical Sciences; College of Science and Engineering, University of Minnesota; Cleveland Clinic; Mazandaran University of Medical Sciences; Babol University of Medical Sciences; Golestan University of Medical Sciences; Aksum University; Institute for Research in Fundamental Sciences; Tehran University of Medical Sciences and Health Services; Hamadan University of Medical Sciences; Khalifa University of Science, Technology and Research; McMaster University; Jordan University of Science and Technology; Ministério da Ciência, Tecnologia e Ensino Superior; Johns Hopkins University; Ministry of Health and Medical Education; Universitatea de Medicină şi Farmacie \"Carol Davila\" Bucureşti; Universidad Nacional de Colombia; Sharif University of Technology; Ain Shams University; Deutsches Krebsforschungszentrum; South African Medical Research Council; Morgan State University; Hamad Bin Khalifa University; Universitetet i Bergen; Maragheh University of Medical Sciences; Ahmadu Bello University; Fundação para a Ciência e a Tecnologia; Bill and Melinda Gates Foundation; Università degli Studi di Milano; Department of Science and Technology, Ministry of Science and Technology, India; Đại học Quốc gia Hà Nội; Universität Bielefeld; Institució Catalana de Recerca i Estudis Avançats; Department of Science and Technology, Government of Kerala; A.T. Still University; Qatar Foundation; Università di Catania; Brigham and Women's Hospital; United Arab Emirates University; Harvard University; San Diego State University","keywords":"Medicine; Stomach cancer; Incidence (geometry); Population; Demography; Cancer; Disease burden; Mortality rate; Burden of disease; Environmental health; Surgery; Internal medicine","authors":[{"name":"Arash Etemadi","is_ca":false},{"name":"Saeid Safiri","is_ca":false},{"name":"Sadaf G Sepanlou","is_ca":false},{"name":"Kevin S Ikuta","is_ca":false},{"name":"Catherine Bisignano","is_ca":false},{"name":"Ramin Shakeri","is_ca":false},{"name":"Mohammad Amani","is_ca":false},{"name":"Christina Fitzmaurice","is_ca":false},{"name":"Molly R Nixon","is_ca":false},{"name":"Nooshin Abbasi","is_ca":false},{"name":"Hassan Abolhassani","is_ca":false},{"name":"Shailesh M Advani","is_ca":false},{"name":"Mohsen Afarideh","is_ca":false},{"name":"Tomi Akinyemiju","is_ca":false},{"name":"Shazia Alam","is_ca":false},{"name":"Mahtab Alikhani","is_ca":false},{"name":"Vahid Alipour","is_ca":false},{"name":"Christine A. Allen","is_ca":false},{"name":"Amir Almasi‐Hashiani","is_ca":false},{"name":"Jalal Arabloo","is_ca":false},{"name":"Reza Assadi","is_ca":false},{"name":"Suleman Atique","is_ca":false},{"name":"Ashish Awasthi","is_ca":false},{"name":"Ahad Bakhtiari","is_ca":false},{"name":"Masoud Behzadifar","is_ca":false},{"name":"Kidanemaryam Berhe","is_ca":false},{"name":"Neeraj Bhala","is_ca":false},{"name":"Ali Bijani","is_ca":false},{"name":"Muhammad Shahdaat Bin Sayeed","is_ca":false},{"name":"Tone Bjørge","is_ca":false},{"name":"Antonio Maria Borzì","is_ca":false},{"name":"Dejana Braithwaite","is_ca":false},{"name":"Hermann Brenner","is_ca":false},{"name":"Giulia Carreras","is_ca":false},{"name":"Félix Carvalho","is_ca":false},{"name":"Carlos A Castañeda-Orjuela","is_ca":false},{"name":"Franz Castro","is_ca":false},{"name":"Dinh‐Toi Chu","is_ca":false},{"name":"Vera Marisa Costa","is_ca":false},{"name":"Ahmad Daryani","is_ca":false},{"name":"Dragoş Virgil Daviţoiu","is_ca":false},{"name":"Gebre Teklemariam Demoz","is_ca":false},{"name":"Asmamaw Demis","is_ca":false},{"name":"Edgar Denova‐Gutiérrez","is_ca":false},{"name":"Subhojit Dey","is_ca":false},{"name":"Mostafa Dianati Nasab","is_ca":false},{"name":"Shirin Djalalinia","is_ca":false},{"name":"Mohammad Hassan Emamian","is_ca":false},{"name":"Mohammad Farahmand","is_ca":false},{"name":"João Carlos Fernandes","is_ca":false},{"name":"Florian Fischer","is_ca":false},{"name":"Masoud Foroutan","is_ca":false},{"name":"Mohamed M. Gad","is_ca":false},{"name":"Silvano Gallus","is_ca":false},{"name":"Gebreamlak Gebremedhn Gebremeskel","is_ca":false},{"name":"Getnet A Gedefew","is_ca":false},{"name":"Fatemeh Ghaseni-Kebria","is_ca":false},{"name":"Giuseppe Gorini","is_ca":false},{"name":"Nima Hafezi‐Nejad","is_ca":false},{"name":"Arvin Haj‐Mirzaian","is_ca":false},{"name":"Josep María Haro","is_ca":false},{"name":"James Harvey","is_ca":false},{"name":"Amir Hasanzadeh","is_ca":false},{"name":"Maryam Hashemian","is_ca":false},{"name":"Hamid Yimam Hassen","is_ca":false},{"name":"Simon I Hay","is_ca":false},{"name":"Hagos D Hidru","is_ca":false},{"name":"Mihaela Hostiuc","is_ca":false},{"name":"Mowafa Househ","is_ca":false},{"name":"Olayinka Stephen Ilesanmi","is_ca":false},{"name":"Milena Ilić","is_ca":false},{"name":"Kaire Innos","is_ca":false},{"name":"Farhad Islami","is_ca":false},{"name":"Spencer L James","is_ca":false},{"name":"Ensiyeh Jenabi","is_ca":false},{"name":"Rohollah Kalhor","is_ca":false},{"name":"Farin Kamangar","is_ca":false},{"name":"Amir Kasaeian","is_ca":false},{"name":"André Pascal Kengne","is_ca":false},{"name":"Yousef Khader","is_ca":false},{"name":"Rovshan Khalilov","is_ca":false},{"name":"Ejaz Ahmad Khan","is_ca":false},{"name":"Gulfaraz Khan","is_ca":false},{"name":"Maryam Khayamzadeh","is_ca":false},{"name":"Maryam Khazaee-Pool","is_ca":false},{"name":"Salman Khazaei","is_ca":false},{"name":"Abdullah T Khoja","is_ca":false},{"name":"Fatemah Khosravi Shadmani","is_ca":false},{"name":"Yun Jin Kim","is_ca":false},{"name":"Jonathan Kocarnik","is_ca":false},{"name":"Hamidreza Komaki","is_ca":false},{"name":"Ai Koyanagi","is_ca":false},{"name":"Vivek Kumar","is_ca":false},{"name":"Carlo La Vecchia","is_ca":false},{"name":"Alan D Lopez","is_ca":false},{"name":"Raimundas Lunevičius","is_ca":false},{"name":"Navid Manafi","is_ca":false},{"name":"Ana-Laura Manda","is_ca":false},{"name":"Birhanu Geta","is_ca":false},{"name":"Hailemariam Abiy Alemu Meheretu","is_ca":false},{"name":"Getnet Mengistu","is_ca":false},{"name":"Bartosz Miazgowski","is_ca":false},{"name":"Seyed Mostafa Mir","is_ca":false},{"name":"Karzan Abdulmuhsin Mohammad","is_ca":false},{"name":"Naser Mohammad Gholi Mezerji","is_ca":false},{"name":"Mahdi Mohammadian","is_ca":false},{"name":"Abdollah Mohammadian-Hafshejani","is_ca":false},{"name":"Reza Mohammadpourhodki","is_ca":false},{"name":"Shafiu Mohammed","is_ca":false},{"name":"Farnam Mohebi","is_ca":false},{"name":"Ali H. Mokdad","is_ca":false},{"name":"Lorenzo Monasta","is_ca":false},{"name":"Mahmood Moosazadeh","is_ca":false},{"name":"Maryam Moossavi","is_ca":false},{"name":"Ghobad Moradi","is_ca":false},{"name":"Farhad Moradpour","is_ca":false},{"name":"Rahmatollah Moradzadeh","is_ca":false},{"name":"Ilais Moreno Vel squez","is_ca":false},{"name":"Abbas Mosapour","is_ca":false},{"name":"Mehdi Naderi","is_ca":false},{"name":"Gurudatta Naik","is_ca":false},{"name":"Farid Najafi","is_ca":false},{"name":"Azin Nahvijou","is_ca":false},{"name":"Ionuţ Negoi","is_ca":false},{"name":"Rajan Nikbakhsh","is_ca":false},{"name":"Marzieh Nojomi","is_ca":false},{"name":"Andrew T Olagunju","is_ca":false},{"name":"Tinuke O Olagunju","is_ca":false},{"name":"Eyal Oren","is_ca":false},{"name":"Hadi Parsian","is_ca":false},{"name":"Cristiano Piccinelli","is_ca":false},{"name":"Akram Pourshams","is_ca":false},{"name":"Hossein Poustchi","is_ca":false},{"name":"Navid Rabiee","is_ca":false},{"name":"Amir Radfar","is_ca":false},{"name":"Alireza Rafiei","is_ca":false},{"name":"Mahdi Rahimi","is_ca":false},{"name":"Marveh Rahmati","is_ca":false},{"name":"André M. N. Renzaho","is_ca":false},{"name":"Nima Rezaei","is_ca":false},{"name":"Ana Isabel Ribeiro","is_ca":false},{"name":"Gholamreza Roshandel","is_ca":false},{"name":"Anas M. Saad","is_ca":false},{"name":"Seyedmohammad Saadatagah","is_ca":false},{"name":"Hamideh Salimzadeh","is_ca":false},{"name":"Abdallah M Samy","is_ca":false},{"name":"Juan Sanabria","is_ca":false},{"name":"Milena M Santric-Milicevic","is_ca":false},{"name":"Arash Sarveazad","is_ca":false},{"name":"Monika Sawhney","is_ca":false},{"name":"Faramarz Shaahmadi","is_ca":false},{"name":"Mario Šekerija","is_ca":false},{"name":"Masood Ali Shaikh","is_ca":false},{"name":"Amir Shamshirian","is_ca":false},{"name":"Sudeep K Siddappa Malleshappa","is_ca":false},{"name":"Jasvinder A. Singh","is_ca":false},{"name":"Catalin-Gabriel Smarandache","is_ca":false},{"name":"Moslem Soofi","is_ca":false},{"name":"Takahiro Tabuchi","is_ca":false},{"name":"Degena Bahrey Tadesse","is_ca":false},{"name":"Leili Tapak","is_ca":false},{"name":"Berhe Etsay Tesfay","is_ca":false},{"name":"Eugenio Traini","is_ca":false},{"name":"Bach Xuan Tran","is_ca":false},{"name":"Khanh Bao Tran","is_ca":false},{"name":"Marco Vacante","is_ca":false},{"name":"Amir Vahedian‐Azimi","is_ca":false},{"name":"Yousef Veisani","is_ca":false},{"name":"Kia Vosoughi","is_ca":false},{"name":"Isidora S Vujcic","is_ca":false},{"name":"Ronny Westerman","is_ca":false},{"name":"Adam Wondmieneh","is_ca":false},{"name":"Rixing Xu","is_ca":false},{"name":"Sanni Yaya","is_ca":false},{"name":"Vahid Yazdi‐Feyzabadi","is_ca":false},{"name":"Zabihollah Yousefi","is_ca":false},{"name":"Bhaman Yousefi","is_ca":false},{"name":"Telma Zahirian Moghadam","is_ca":false},{"name":"Leila Zaki","is_ca":false},{"name":"Mohammad Zamani","is_ca":false},{"name":"Maryam Zamanian","is_ca":false},{"name":"Hamed Zandian","is_ca":false},{"name":"Afshin Zarghi","is_ca":false},{"name":"Zhi-Jiang Zhang","is_ca":false},{"name":"Mohsen Naghavi","is_ca":false},{"name":"Reza Malekzadeh","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02817619905334134,"gpt":0.3172563689433689,"spread":0.2890801698900275,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001569492,0.0004061181,0.002063347,0.000171044,0.00025114,0.00001959735,0.0008186408,0.0001778986,0.00001586751],"category_scores_gemma":[0.0002712471,0.0002317643,0.0002924575,0.0004947851,0.001397633,0.00006459918,0.0003366474,0.0003825966,0.000006809513],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003550775,"about_ca_system_score_gemma":0.0002610026,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002139699,"about_ca_topic_score_gemma":0.01551291,"domain_scores_codex":[0.9958139,0.0009037894,0.001214067,0.0006457113,0.0005368232,0.0008857076],"domain_scores_gemma":[0.9962356,0.001018262,0.0009120032,0.00104234,0.0006598281,0.0001319337],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.007199181,0.000185913,0.9808466,0.000732554,0.00769371,0.00002338913,0.0005794707,0.0005541336,0.000008946321,0.0002954785,0.001860918,0.00001965878],"study_design_scores_gemma":[0.007187664,0.001810873,0.9750173,0.0002962545,0.004658132,0.0001755909,0.001546466,0.008095384,3.991637e-7,0.0002298701,0.0008721073,0.0001099622],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9649693,0.004904259,0.00016498,0.02591769,0.0004529302,0.002948213,0.000584588,0.00002658207,0.00003141823],"genre_scores_gemma":[0.9963034,0.0009351381,0.00003033314,0.001643683,0.0002105558,0.0007765125,0.00003454077,0.00001747562,0.00004830487],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03133412,"threshold_uncertainty_score":0.9451072,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2139464969","doi":"10.1136/bmj.g3174","title":"Helicobacter pylori eradication therapy to prevent gastric cancer in healthy asymptomatic infected individuals: systematic review and meta-analysis of randomised controlled trials","year":2014,"lang":"en","type":"review","venue":"BMJ","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":596,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Population Health Research Institute","funders":"World Health Organization","keywords":"Medicine; Helicobacter pylori; Meta-analysis; Relative risk; Internal medicine; Asymptomatic; Cancer; Randomized controlled trial; Placebo; Confidence interval; Incidence (geometry); Gastroenterology; Pathology; Alternative medicine","authors":[{"name":"Alexander C. Ford","is_ca":false},{"name":"Donald T. Forman","is_ca":false},{"name":"R. H. Hunt","is_ca":true},{"name":"Yuhong Yuan","is_ca":true},{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1015101566573374,"gpt":0.4166510845243632,"spread":0.3151409278670259,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.01658253,0.0009692837,0.05327751,0.002390127,0.00004845345,0.00002695219,0.0002855457,0.0004168585,0.0002663443],"category_scores_gemma":[0.01379476,0.0005304319,0.004964463,0.002649559,0.00007375219,0.00005969097,0.00008512974,0.00051153,0.00001887029],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002881294,"about_ca_system_score_gemma":0.0003734642,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005047268,"about_ca_topic_score_gemma":0.00005042865,"domain_scores_codex":[0.9779824,0.01122147,0.008856214,0.0007831777,0.0006415598,0.0005151801],"domain_scores_gemma":[0.9851683,0.006016534,0.0069222,0.001158905,0.0004385823,0.0002954708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.0008261802,0.0002609601,0.0001553484,0.4072329,0.5878946,0.00000273476,0.0001378997,0.000002365206,4.272556e-7,0.00000147387,0.0004007059,0.003084341],"study_design_scores_gemma":[0.02180163,0.0005528436,0.0003710064,0.0658606,0.9083631,0.00002424595,0.000004621945,0.000009107908,1.772853e-7,0.000001052991,0.002750698,0.0002609068],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002247098,0.9459069,0.00005480878,0.003889256,0.00008899426,0.04957149,0.0002043509,0.00004452916,0.00001497611],"genre_scores_gemma":[0.000158518,0.9626063,0.0001262086,0.002953682,0.00007813342,0.0337356,0.0001850692,0.0000669381,0.00008960706],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.3413723,"threshold_uncertainty_score":0.9997147,"prediction_status":"machine_predicted_unvalidated"},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"meta_analysis","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"meta_analysis","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2125173799","doi":"10.1111/j.1440-1746.2009.05982.x","title":"Second Asia–Pacific Consensus Guidelines for <i>Helicobacter pylori</i> infection","year":2009,"lang":"en","type":"article","venue":"Journal of Gastroenterology and Hepatology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":553,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Medicine; Helicobacter pylori; Clarithromycin; Internal medicine; Metronidazole; Gastroenterology; Omeprazole; Cancer; Proton-pump inhibitor; Population; Aspirin; Antibiotics","authors":[{"name":"Kwong Ming Fock","is_ca":false},{"name":"Peter Katelaris","is_ca":false},{"name":"Kentaro Sugano","is_ca":false},{"name":"Tiing Leong Ang","is_ca":false},{"name":"Richard H. Hunt","is_ca":true},{"name":"Nicholas J. Talley","is_ca":false},{"name":"Shiu Kum Lam","is_ca":false},{"name":"Shu‐Dong Xiao","is_ca":false},{"name":"Huck Joo Tan","is_ca":false},{"name":"Chun‐Ying Wu","is_ca":false},{"name":"Hyun Chae Jung","is_ca":false},{"name":"Bùi Hữu Hoàng","is_ca":false},{"name":"Udom Kachintorn","is_ca":false},{"name":"Khean‐Lee Goh","is_ca":false},{"name":"Tsutomu Chiba","is_ca":false},{"name":"Abdul Aziz Rani","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03607561414795499,"gpt":0.3088057598114183,"spread":0.2727301456634633,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006236036,0.0003061782,0.001135171,0.0004200115,0.0001377217,0.00001284051,0.00009280189,0.0003432448,0.00004864894],"category_scores_gemma":[0.0004641371,0.0002496728,0.0002594033,0.00009324714,0.000350444,0.00009743184,0.00003607999,0.0006346564,0.000005493224],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006144786,"about_ca_system_score_gemma":0.00007919856,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002868644,"about_ca_topic_score_gemma":0.00007925553,"domain_scores_codex":[0.9975931,0.0001785212,0.001193031,0.0003075959,0.0001289262,0.0005988299],"domain_scores_gemma":[0.9974167,0.0001281896,0.0006580089,0.0001989075,0.001354009,0.0002441767],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.009750205,0.0002569587,0.9383129,0.00004617361,0.0008080801,0.0002223224,0.0001090434,0.000002492092,0.003748285,0.0001062111,0.04469567,0.001941636],"study_design_scores_gemma":[0.01294678,0.03124653,0.8357539,0.0001103612,0.000984872,0.03997205,0.0001343375,0.0001187287,0.0005716052,0.0007627029,0.07721458,0.0001835127],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9291206,0.000391029,0.001198781,0.06774122,0.001008022,0.0002857918,0.00001692346,0.00003177815,0.000205889],"genre_scores_gemma":[0.9817216,0.0005697584,0.003547022,0.0133619,0.0005864046,0.000009681353,0.00001038062,0.00002104465,0.0001722567],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.102559,"threshold_uncertainty_score":0.9999955,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2122933597","doi":"10.1053/j.gastro.2003.08.033","title":"Meta-analysis of the relationship between cagA seropositivity and gastric cancer","year":2003,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":546,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"CagA; Helicobacter pylori; Cancer; Serology; Medicine; Internal medicine; Gastroenterology; Confidence interval; Immunology; Risk factor; Antibody; Biology; Virulence; Genetics; Gene","authors":[{"name":"Jia Huang","is_ca":true},{"name":"Ge Zheng","is_ca":false},{"name":"Katica Sumanac","is_ca":true},{"name":"E. Jan Irvine","is_ca":true},{"name":"Richard H. Hunt","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1941336535282425,"gpt":0.3733528357673134,"spread":0.1792191822390709,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006052943,0.0006987837,0.007401081,0.0008891225,0.000147215,0.00001028136,0.0002977824,0.0005325485,0.0001099567],"category_scores_gemma":[0.0002179862,0.0004273859,0.003034807,0.001422042,0.0006615804,0.00005021373,0.0003079166,0.001287392,0.000007303406],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001705772,"about_ca_system_score_gemma":0.0001345298,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008652417,"about_ca_topic_score_gemma":0.0003285667,"domain_scores_codex":[0.9951091,0.001749528,0.001337345,0.0007942969,0.000312337,0.0006973781],"domain_scores_gemma":[0.996814,0.0006987304,0.001138195,0.0009711105,0.0001870198,0.0001909015],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.00002842266,0.00005039473,0.7080761,0.001053534,0.2885282,0.000008467406,0.00003415665,0.000001775281,1.706297e-7,0.000008321419,0.000159356,0.002051182],"study_design_scores_gemma":[0.0003476204,0.0002694549,0.3416679,0.0001920583,0.6394686,0.0001408037,0.000004534905,6.221406e-7,1.224145e-7,0.000004482546,0.01781877,0.00008503499],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.02379555,0.972914,0.0001276954,0.001032077,0.0002136705,0.001055749,0.0007861965,0.00003245618,0.00004261311],"genre_scores_gemma":[0.02182333,0.975943,0.0002291529,0.0007560524,0.00009571329,0.0003518319,0.000189436,0.00007965767,0.0005318772],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.3664081,"threshold_uncertainty_score":0.9998178,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3083668462","doi":"10.3389/fimmu.2020.02054","title":"Mucins in Intestinal Mucosal Defense and Inflammation: Learning From Clinical and Experimental Studies","year":2020,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":475,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Population Health Research Institute; McMaster University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canadian Association of Gastroenterology; McMaster University","keywords":"Mucin; Mucus; Goblet cell; Context (archaeology); Immune system; Biology; Immunology; Secretion; Barrier function; Glycocalyx; Inflammation; Cell biology; Epithelium; Microbiology; Biochemistry","authors":[{"name":"Jensine A. Grondin","is_ca":true},{"name":"Yun Han Kwon","is_ca":true},{"name":"Parsa Mehraban Far","is_ca":true},{"name":"Sabah Haq","is_ca":true},{"name":"Waliul I. Khan","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06153462913836881,"gpt":0.3586194405926635,"spread":0.2970848114542947,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003506946,0.000472484,0.003330009,0.0004268657,0.00006392319,0.00001163131,0.0001206952,0.0005806687,0.000006372627],"category_scores_gemma":[0.001525084,0.0004209536,0.0001336609,0.0002429459,0.001187845,0.00007200989,0.0005347437,0.002261079,0.00001185572],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002087053,"about_ca_system_score_gemma":0.0001205941,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002979686,"about_ca_topic_score_gemma":0.00002632608,"domain_scores_codex":[0.9966338,0.0008623682,0.001287498,0.0007324433,0.00009181477,0.0003920416],"domain_scores_gemma":[0.9989093,0.0004174856,0.0003296841,0.00020974,0.00004921372,0.0000846085],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005989199,0.000103744,0.3439421,0.001218411,0.003114711,0.001272283,0.003298569,3.579236e-7,0.00000465093,0.00001195376,0.000614339,0.64582],"study_design_scores_gemma":[0.01078561,0.003752026,0.03989875,0.0172985,0.002208064,0.001568109,0.01042079,0.0001046376,0.000005664457,0.0001141892,0.9130157,0.0008279837],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.06295887,0.9346969,0.00003848631,0.0004631659,0.001184076,0.0005674531,0.000005276124,0.00005141393,0.00003440722],"genre_scores_gemma":[0.001604307,0.9938766,0.003944295,0.00008634159,0.0002230301,0.000118257,0.00007080506,0.0000447863,0.00003154893],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9124013,"threshold_uncertainty_score":0.9998242,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2604377831","doi":"10.1097/mpg.0000000000001594","title":"Joint ESPGHAN/NASPGHAN Guidelines for the Management of <i>Helicobacter pylori</i> in Children and Adolescents (Update 2016)","year":2017,"lang":"en","type":"review","venue":"Journal of Pediatric Gastroenterology and Nutrition","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":467,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta; SickKids Foundation; University of Toronto","funders":"North American Society for Pediatric Gastroenterology, Hepatology and Nutrition","keywords":"Medicine; Clarithromycin; Helicobacter pylori; Pediatric gastroenterology; Hepatology; Internal medicine; Amoxicillin; Metronidazole; Proton-pump inhibitor; Antibiotics; Gastroenterology; Intensive care medicine; Pediatrics","authors":[{"name":"Nicola L. Jones","is_ca":true},{"name":"Sibylle Koletzko","is_ca":false},{"name":"Karen J. Goodman","is_ca":true},{"name":"Patrick Bontems","is_ca":false},{"name":"Samy Cadranel","is_ca":true},{"name":"Thomas Casswall","is_ca":false},{"name":"Steve Czinn","is_ca":false},{"name":"Benjamin D. Gold","is_ca":true},{"name":"Jeannette Guarner","is_ca":false},{"name":"Yoram Elitsur","is_ca":true},{"name":"Matjaž Homan","is_ca":false},{"name":"Nicolas Kalach","is_ca":true},{"name":"Michal Kori","is_ca":false},{"name":"Armando Madrazo","is_ca":false},{"name":"Françis Mégraud","is_ca":true},{"name":"Alexandra Papadopoulou","is_ca":false},{"name":"Marion Rowland","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0599595284049772,"gpt":0.3377118540325942,"spread":0.277752325627617,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00110654,0.000460371,0.002201255,0.0006737344,0.0001287688,0.0000242902,0.0002771906,0.0003536836,0.000002729823],"category_scores_gemma":[0.0001027463,0.0003003181,0.0004694103,0.0001102344,0.0002445228,0.0001428334,0.0002140014,0.0007777408,0.000001491191],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006294984,"about_ca_system_score_gemma":0.00005230813,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005294481,"about_ca_topic_score_gemma":0.000006947637,"domain_scores_codex":[0.9968117,0.0001873877,0.001934396,0.0003691035,0.000232187,0.000465248],"domain_scores_gemma":[0.9966931,0.00006538508,0.002229093,0.0003445642,0.0005212143,0.0001465843],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.006609655,0.001961249,0.4822978,0.04825622,0.0100299,0.0002459836,0.0001027612,8.163634e-7,0.000004525069,0.00001128243,0.02471646,0.4257633],"study_design_scores_gemma":[0.03410066,0.009580039,0.6782891,0.04502556,0.04233218,0.007969676,0.0001064923,0.000009209941,0.00000225001,0.0001102081,0.1819563,0.000518353],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.05076801,0.9443902,0.0001942906,0.002254275,0.000561345,0.0017037,0.000119344,0.000007158469,0.000001617059],"genre_scores_gemma":[0.002998154,0.9940429,0.001075933,0.0003309,0.001359159,0.00008839308,0.00004927791,0.00003873168,0.00001651972],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.425245,"threshold_uncertainty_score":0.9999449,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2071957690","doi":"10.1053/j.gastro.2005.09.020","title":"American Gastroenterological Association Technical Review on the Evaluation of Dyspepsia","year":2005,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":441,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Gastroenterology; Internal medicine; Association (psychology); General surgery; Psychology","authors":[{"name":"Nicholas J. Talley","is_ca":false},{"name":"Nimish Vakil","is_ca":false},{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0869603398653013,"gpt":0.3872140696742735,"spread":0.3002537298089722,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003520745,0.0009147783,0.004856544,0.0003950362,0.0001051401,0.00001166019,0.0005861825,0.0005356193,0.000391214],"category_scores_gemma":[0.002499051,0.0005603642,0.001282784,0.000555502,0.0006686128,0.0000481786,0.0003304729,0.002232847,0.0002601897],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001449485,"about_ca_system_score_gemma":0.0002146283,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005002992,"about_ca_topic_score_gemma":0.0000456138,"domain_scores_codex":[0.9906148,0.003628145,0.002177832,0.0009904425,0.001424791,0.001164013],"domain_scores_gemma":[0.9944196,0.0005756995,0.002723783,0.001274928,0.0007979727,0.0002080707],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006323208,0.001008475,0.0101368,0.004908379,0.00403148,0.00004440873,0.00003042755,0.000002932558,0.000004431321,0.00003304939,0.05120685,0.9279605],"study_design_scores_gemma":[0.001957912,0.01134007,0.00984339,0.03328464,0.02464318,0.001923428,0.0000268971,0.00001339155,6.414135e-7,0.00001121833,0.9166571,0.0002980808],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002911255,0.9783186,0.00001807775,0.01367805,0.0003461989,0.003880197,0.0001101143,0.000124273,0.0006132833],"genre_scores_gemma":[0.002042725,0.9860674,0.0002161375,0.009890322,0.0003511126,0.001072774,0.0002163454,0.00008854127,0.00005471525],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9276624,"threshold_uncertainty_score":0.9996848,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3012615718","doi":"10.1136/gutjnl-2020-320839","title":"<i>Helicobacter pylori</i>eradication therapy to prevent gastric cancer: systematic review and meta-analysis","year":2020,"lang":"en","type":"review","venue":"Gut","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":438,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"Medicine; Helicobacter pylori; Meta-analysis; Internal medicine; Number needed to treat; Cancer; Gastroenterology; Relative risk; Placebo; Incidence (geometry); Randomized controlled trial; Population; Confidence interval; Pathology; Alternative medicine","authors":[{"name":"Alexander C. Ford","is_ca":false},{"name":"Yuhong Yuan","is_ca":true},{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0832791037759825,"gpt":0.3570794860457012,"spread":0.2738003822697187,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005707746,0.0008836592,0.01387444,0.0005232021,0.00008676807,0.00003697456,0.0003341039,0.0002577641,0.0002585042],"category_scores_gemma":[0.0002495255,0.000546139,0.002539814,0.002092311,0.0000623278,0.00006269987,0.0001646334,0.0006328578,0.0002781349],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002671311,"about_ca_system_score_gemma":0.0001835082,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003490344,"about_ca_topic_score_gemma":0.00001782612,"domain_scores_codex":[0.9955077,0.0007268749,0.00181895,0.001014959,0.0004514321,0.0004800825],"domain_scores_gemma":[0.9970931,0.0001550755,0.0009715862,0.001088536,0.0002427576,0.0004489514],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.000008097809,0.00008068178,0.00001814325,0.5044405,0.4794506,0.00002566881,0.00008549068,1.659221e-7,4.198127e-7,0.000002274875,0.002543038,0.01334493],"study_design_scores_gemma":[0.0001139632,0.0001577458,0.00001919423,0.018603,0.6342766,0.0000790246,0.000002546486,4.350209e-7,1.474636e-7,4.444798e-7,0.3465579,0.0001889757],"study_design_candidate":"meta_analysis","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000002455895,0.9811961,0.00006454429,0.0106337,0.00007949055,0.007646739,0.0002334268,0.00009879733,0.00004474712],"genre_scores_gemma":[0.000005073172,0.9818926,0.0002180162,0.01115649,0.0001250747,0.005499566,0.0001862368,0.00008535492,0.0008315475],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.4858375,"threshold_uncertainty_score":0.999699,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2790522681","doi":"10.1111/hel.12475","title":"Fifth Chinese National Consensus Report on the management of<i>Helicobacter pylori</i>infection","year":2018,"lang":"en","type":"article","venue":"Helicobacter","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":432,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Helicobacter pylori infection; Consensus conference; Helicobacter pylori; Medicine; Voting; Statement (logic); Family medicine; Gastroenterology; Political science; Internal medicine","authors":[{"name":"Wen Zhong Liu","is_ca":false},{"name":"Yong Xie","is_ca":false},{"name":"Hong Lü","is_ca":false},{"name":"Hong Cheng","is_ca":false},{"name":"Zhi Zeng","is_ca":false},{"name":"Li Zhou","is_ca":false},{"name":"Ye Chen","is_ca":false},{"name":"Jiang Bin Wang","is_ca":false},{"name":"Yi Qi Du","is_ca":false},{"name":"Nong Hua Lu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02409929672226525,"gpt":0.2920797401967679,"spread":0.2679804434745026,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006927797,0.0004085914,0.000494688,0.0002285901,0.0002433167,0.00002703847,0.0001586185,0.0001869178,0.00049317],"category_scores_gemma":[0.0002041914,0.0002603187,0.0002397302,0.0005147814,0.0005483675,0.00007258431,0.0001677225,0.0004434241,0.000758426],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001718043,"about_ca_system_score_gemma":0.00007046325,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004186872,"about_ca_topic_score_gemma":0.00003019133,"domain_scores_codex":[0.9972273,0.0001209983,0.0007831187,0.0005996337,0.0007398397,0.0005290882],"domain_scores_gemma":[0.997623,0.0001568392,0.0003442893,0.0007905854,0.0009379492,0.000147322],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001883984,0.0008922007,0.9543343,0.0002277167,0.00448739,0.0005969207,0.0009948694,0.000004226875,0.00540536,0.001724563,0.02690746,0.002541023],"study_design_scores_gemma":[0.00170411,0.0007473975,0.918887,0.0002496314,0.000267352,0.0008300547,0.00003820607,0.00003030053,0.001502626,0.0001750369,0.07536271,0.0002055733],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9596465,0.00003030055,0.00005673685,0.01061406,0.001142099,0.0007244551,0.00003128058,0.0001487872,0.02760576],"genre_scores_gemma":[0.990332,0.00009086804,0.000445851,0.005011666,0.000949171,0.0001111445,0.00006139128,0.00005562752,0.002942267],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04845525,"threshold_uncertainty_score":0.9999849,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2115610111","doi":"10.1136/gutjnl-2014-308915","title":"Global patterns of cardia and non-cardia gastric cancer incidence in 2012","year":2015,"lang":"en","type":"article","venue":"Gut","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":405,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"World Health Organization","keywords":"Incidence (geometry); Cancer incidence; Demography; Cancer; GASTRIC CARDIA; Medicine; Internal medicine; Mathematics; Adenocarcinoma","authors":[{"name":"Amy Colquhoun","is_ca":true},{"name":"Melina Arnold","is_ca":false},{"name":"Jacques Ferlay","is_ca":false},{"name":"Karen J. Goodman","is_ca":true},{"name":"D Forman","is_ca":false},{"name":"Isabelle Soerjomataram","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02168243865130414,"gpt":0.2921759809885032,"spread":0.270493542337199,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000174919,0.0001200419,0.0003817839,0.0000758215,0.00001162745,0.000003196641,0.00005747862,0.00008117515,0.000009068291],"category_scores_gemma":[0.00008543969,0.0001057361,0.00003810423,0.0001902945,0.00007593834,0.00008037219,0.0001103676,0.0001350773,0.00001450905],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001473341,"about_ca_system_score_gemma":0.00009111095,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002279346,"about_ca_topic_score_gemma":0.001351133,"domain_scores_codex":[0.9990958,0.00004103843,0.0002233334,0.0001954187,0.0001712827,0.0002731508],"domain_scores_gemma":[0.9994636,0.00001737157,0.00006335146,0.00018253,0.0001226625,0.0001504455],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000943039,0.00002508649,0.9950275,0.00002786163,0.00011679,0.00005066642,0.0004004958,0.00001494338,0.0001166469,0.00000157681,0.002471686,0.001652418],"study_design_scores_gemma":[0.001592258,0.0001878742,0.997126,0.0001221956,0.00009766548,0.00005683092,0.000169858,0.00001922027,0.00002271869,0.000010017,0.0005408403,0.00005451874],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962384,0.001663902,0.0001060359,0.0007284257,0.0003109239,0.0001821692,0.00005334483,0.00001447292,0.0007023385],"genre_scores_gemma":[0.9989603,0.0003547321,0.0001450757,0.0003112498,0.0001085541,0.00002439509,0.000004886336,0.000007799771,0.00008306533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002721855,"threshold_uncertainty_score":0.4311793,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3034632308","doi":"10.1053/j.gastro.2020.05.059","title":"AGA Clinical Practice Guidelines on the Role of Probiotics in the Management of Gastrointestinal Disorders","year":2020,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":396,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Impact; Mount Sinai Hospital; University of Toronto; McMaster University","funders":"","keywords":"Guideline; Medicine; Family medicine; Scopus; Alternative medicine; MEDLINE; Medical education; Political science; Pathology","authors":[{"name":"Grace L. Su","is_ca":false},{"name":"Cynthia W. Ko","is_ca":false},{"name":"Přemysl Berčík","is_ca":true},{"name":"Yngve Falck–Ytter","is_ca":false},{"name":"Shahnaz Sultan","is_ca":false},{"name":"Adam V. Weizman","is_ca":true},{"name":"Rebecca L. Morgan","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08016021155798231,"gpt":0.3957895328944646,"spread":0.3156293213364823,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002190207,0.0005832365,0.002558212,0.0001984031,0.00005419104,0.000007179644,0.0008538673,0.000218949,0.0000154761],"category_scores_gemma":[0.001790647,0.0003166228,0.0007225093,0.0003933903,0.0007189982,0.00003564963,0.0004191641,0.002036203,0.00003202113],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006278013,"about_ca_system_score_gemma":0.00009729802,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001041907,"about_ca_topic_score_gemma":0.00002675892,"domain_scores_codex":[0.9937242,0.001745165,0.002809345,0.0006453996,0.0004376804,0.0006382258],"domain_scores_gemma":[0.9961371,0.0009463358,0.001571177,0.0008896927,0.0003648728,0.0000907924],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.005088925,0.003598791,0.0396138,0.01054825,0.007980735,0.0009417555,0.0005087812,0.00001472729,0.000001451246,0.001189937,0.00704578,0.923467],"study_design_scores_gemma":[0.001793466,0.0101769,0.00431811,0.01387696,0.005087326,0.002249312,0.001587582,0.00002411063,2.721326e-7,0.00005109287,0.960704,0.0001308307],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.003187996,0.9423492,0.0002154585,0.04600001,0.0005508379,0.005563218,0.0001213382,0.00006119459,0.001950757],"genre_scores_gemma":[0.0007355495,0.9874299,0.007293584,0.004043104,0.0001937945,0.0001692281,0.00005630039,0.00006045612,0.00001813194],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9536583,"threshold_uncertainty_score":0.9999286,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3000269369","doi":"10.1186/s13017-019-0283-9","title":"Perforated and bleeding peptic ulcer: WSES guidelines","year":2020,"lang":"en","type":"article","venue":"World Journal of Emergency Surgery","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":358,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Foothills Medical Centre","funders":"","keywords":"Medicine; Peptic ulcer; Population; Disease; Incidence (geometry); Intensive care medicine; Health care; Systematic review; MEDLINE; General surgery; Surgery; Internal medicine","authors":[{"name":"Antonio Tarasconi","is_ca":false},{"name":"Federico Coccolini","is_ca":false},{"name":"Walter L. Biffl","is_ca":false},{"name":"Matteo Tomasoni","is_ca":false},{"name":"Luca Ansaloni","is_ca":false},{"name":"Edoardo Picetti","is_ca":false},{"name":"Sarah Molfino","is_ca":false},{"name":"Vishal G. Shelat","is_ca":false},{"name":"Stefania Cimbanassi","is_ca":false},{"name":"Dieter Weber","is_ca":false},{"name":"Fikri M. Abu‐Zidan","is_ca":false},{"name":"Fabio Cesare Campanile","is_ca":false},{"name":"Salomone Di Saverio","is_ca":false},{"name":"Gian Luca Baiocchi","is_ca":false},{"name":"Claudio Casella","is_ca":false},{"name":"Michael D. Kelly","is_ca":false},{"name":"Andrew W. Kirkpatrick","is_ca":true},{"name":"Ari Leppäniemi","is_ca":false},{"name":"Ernest E. Moore","is_ca":false},{"name":"Andrew Peitzman","is_ca":false},{"name":"Gustavo Pereira Fraga","is_ca":false},{"name":"Marco Ceresoli","is_ca":false},{"name":"Ronald V. Maier","is_ca":false},{"name":"Imtaz Wani","is_ca":false},{"name":"Vittoria Pattonieri","is_ca":false},{"name":"Gennaro Perrone","is_ca":false},{"name":"George C. Velmahos","is_ca":false},{"name":"Michael Sugrue","is_ca":false},{"name":"Massimo Sartelli","is_ca":false},{"name":"Yoram Kluger","is_ca":false},{"name":"Fausto Catena","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1007484441161463,"gpt":0.3228305987779709,"spread":0.2220821546618246,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005932594,0.0002115763,0.000736035,0.0003629041,0.0000956682,0.000009880985,0.00007629584,0.00005433123,0.0005713887],"category_scores_gemma":[0.001537979,0.0001664334,0.0002357177,0.0007269525,0.00006406549,0.0001855365,0.00005832419,0.0004411585,0.0000205412],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002739995,"about_ca_system_score_gemma":0.0000914554,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005219422,"about_ca_topic_score_gemma":0.000008082166,"domain_scores_codex":[0.9978269,0.00006915012,0.001292243,0.000189434,0.0002947086,0.0003275376],"domain_scores_gemma":[0.998028,0.0001260165,0.0004694383,0.0001029444,0.0009136961,0.0003598816],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003541865,0.00004185264,0.809993,0.00007520796,0.0006083467,0.0002386068,0.0003015034,0.00001381157,0.003214972,0.000004823117,0.1820412,0.003112472],"study_design_scores_gemma":[0.003011671,0.001454199,0.76952,0.001512473,0.002190297,0.001444812,0.001654502,0.001031892,0.001436683,0.00009810638,0.2159663,0.0006790463],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9283276,0.009482463,0.00006817177,0.06000444,0.001646762,0.00008418914,0.000002648673,0.00003434311,0.0003494478],"genre_scores_gemma":[0.9829522,0.01220416,0.0005054681,0.002490175,0.001387977,0.000001954332,0.000002962655,0.00003219497,0.0004229303],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05751426,"threshold_uncertainty_score":0.6786957,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2171535037","doi":"10.1111/j.1440-1746.2008.05314.x","title":"Asia–Pacific consensus guidelines on gastric cancer prevention","year":2008,"lang":"en","type":"article","venue":"Journal of Gastroenterology and Hepatology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":351,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"Medicine; Cancer; Atrophic gastritis; Helicobacter pylori; Internal medicine; Gastroenterology; Disease; Gastritis; Risk factor","authors":[{"name":"Kwong Ming Fock","is_ca":false},{"name":"Nick Talley","is_ca":false},{"name":"Paul Moayyedi","is_ca":true},{"name":"Richard H. Hunt","is_ca":true},{"name":"Takeshi Azuma","is_ca":false},{"name":"Kentaro Sugano","is_ca":false},{"name":"Shu Dong XIAO","is_ca":false},{"name":"Shiu Kum Lam","is_ca":false},{"name":"Khean‐Lee Goh","is_ca":false},{"name":"Tsutomu Chiba","is_ca":false},{"name":"Naomi Uemura","is_ca":false},{"name":"Jae Gyu Kim","is_ca":false},{"name":"Nayoung Kim","is_ca":false},{"name":"Tiing Leong Ang","is_ca":false},{"name":"Varocha Mahachai","is_ca":false},{"name":"Hazel M. Mitchell","is_ca":false},{"name":"Abdul Aziz Rani","is_ca":false},{"name":"Jyh‐Ming Liou","is_ca":false},{"name":"Ratha‐Korn Vilaichone","is_ca":false},{"name":"Jose D. Sollano","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05149787100625475,"gpt":0.3219734930521992,"spread":0.2704756220459445,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003631059,0.0002639735,0.0009940518,0.0004841548,0.0001563772,0.000003766273,0.0001051413,0.0002427122,0.00007139859],"category_scores_gemma":[0.0002666411,0.0002085361,0.0001889508,0.0001236895,0.0006148599,0.00005294442,0.00005601986,0.0007523777,0.00001223803],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007644553,"about_ca_system_score_gemma":0.0001394024,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009467334,"about_ca_topic_score_gemma":0.00004843254,"domain_scores_codex":[0.9977407,0.0002714476,0.001010186,0.0002777535,0.0001917277,0.0005081634],"domain_scores_gemma":[0.9982041,0.00008199035,0.0006308717,0.0001833495,0.0006756541,0.0002240791],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.007478081,0.0002697664,0.9683071,0.00002081497,0.0008091684,0.00133188,0.0001104195,0.00001209678,0.0005788659,0.00002432369,0.02023638,0.0008211448],"study_design_scores_gemma":[0.008083003,0.01889365,0.8783761,0.000170378,0.0005826359,0.08691216,0.0001512503,0.00008454525,0.0001365985,0.00009545464,0.006407433,0.0001068192],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9641226,0.0009168764,0.0002330234,0.03357621,0.0007930691,0.000160775,0.000007793568,0.00002291025,0.000166751],"genre_scores_gemma":[0.9905696,0.003685625,0.00166871,0.003371515,0.0003477793,0.00001088418,0.000003866275,0.00002153228,0.0003204989],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08993099,"threshold_uncertainty_score":0.8503854,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2104560884","doi":"10.1128/iai.68.7.4155-4168.2000","title":"Comparative Genomics of<i>Helicobacter pylori</i>: Analysis of the Outer Membrane Protein Families","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":328,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Genome; Gene duplication; Gene; Genetics; Comparative genomics; Bacterial outer membrane; Subfamily; Helicobacter pylori; Gene family; Function (biology); Membrane protein; Genomics; Escherichia coli","authors":[{"name":"Richard A. Alm","is_ca":false},{"name":"James E. Bina","is_ca":true},{"name":"Beth Andrews","is_ca":false},{"name":"P. Doig","is_ca":false},{"name":"Robert E. W. Hancock","is_ca":true},{"name":"T J Trust","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02124655365275399,"gpt":0.2652111210914099,"spread":0.2439645674386559,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001597816,0.0001231919,0.0004920312,0.000168243,0.0001067364,0.000005318908,0.00005310869,0.00007743514,0.0001630038],"category_scores_gemma":[0.00002838007,0.00008375971,0.000156899,0.0005349118,0.0003334517,0.00006539877,0.00005020358,0.0002662026,0.000005618373],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002973554,"about_ca_system_score_gemma":0.00002133167,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009539514,"about_ca_topic_score_gemma":0.0003230814,"domain_scores_codex":[0.9991643,0.0001707788,0.0003269874,0.0001165255,0.00009814881,0.0001232905],"domain_scores_gemma":[0.9993399,0.00003668117,0.000127211,0.0003007227,0.0001613196,0.00003417567],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006060178,0.0004089462,0.8577878,0.00007672305,0.006477236,9.499248e-7,0.006312385,0.0001326717,0.124429,0.00001881202,0.00005793119,0.003691474],"study_design_scores_gemma":[0.0007233914,0.0002340031,0.9608256,0.00003380971,0.001102821,0.00000813536,0.0001729259,0.0001334511,0.03382637,0.000004595289,0.002880597,0.00005425528],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971852,0.00005918333,0.00002043588,0.0002873842,0.0000665292,0.00029116,0.00002129391,0.00001936194,0.002049441],"genre_scores_gemma":[0.9990677,0.0002876055,0.00003964574,0.0002125769,0.00001635552,0.00001361684,0.00001292983,0.000005579524,0.0003440074],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1030378,"threshold_uncertainty_score":0.3415622,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4211023055","doi":"10.1038/s41572-020-0187-8","title":"Autoimmune gastritis","year":2020,"lang":"fi","type":"review","venue":"Nature Reviews Disease Primers","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":327,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Hospital Foundation","funders":"","keywords":"Autoimmune Gastritis; Atrophic gastritis; Intrinsic factor; Medicine; Immunology; Gastritis; Helicobacter pylori; Pernicious anaemia; Parietal cell; pernicious anemia; Vitamin B12; Stomach; Gastric acid; Gastroenterology; Internal medicine; Anemia","authors":[{"name":"Marco Vincenzo Lenti","is_ca":false},{"name":"Massimo Rugge","is_ca":false},{"name":"Edith Lahner","is_ca":false},{"name":"Emanuela Miceli","is_ca":false},{"name":"Ban‐Hock Toh","is_ca":false},{"name":"Robert M. Genta","is_ca":false},{"name":"Christophe De Block","is_ca":false},{"name":"Chaim Hershko","is_ca":false},{"name":"Antonio Di Sabatino","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02869004373212321,"gpt":0.3292674576174048,"spread":0.3005774138852816,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.001224502,0.002943259,0.01114365,0.0005464529,0.0004073723,0.0001059117,0.001491749,0.002553702,0.001551164],"category_scores_gemma":[0.00580479,0.002397405,0.004537868,0.002307786,0.0007577538,0.0002490538,0.0009705346,0.01121786,0.01078909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001245827,"about_ca_system_score_gemma":0.002067332,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001067373,"about_ca_topic_score_gemma":0.000002630273,"domain_scores_codex":[0.9873686,0.002439947,0.003966461,0.002827346,0.001217262,0.002180427],"domain_scores_gemma":[0.9913334,0.000346233,0.00227198,0.002525355,0.0005052497,0.003017796],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002910935,0.0004374053,0.001233966,0.05797103,0.004755562,0.002091145,0.00008477223,8.111311e-8,0.000004110889,0.00004631205,0.05582391,0.8772606],"study_design_scores_gemma":[0.001709323,0.0003913845,0.004453717,0.0758892,0.02891688,0.0001938061,0.00001465105,0.000004396764,4.584926e-7,0.000006188879,0.8873419,0.00107806],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00001310375,0.9733461,0.0000228603,0.01143562,0.003886455,0.008666019,0.0008851694,0.0003455587,0.001399083],"genre_scores_gemma":[0.00005634695,0.9825953,0.0007171747,0.008044488,0.002388755,0.0009575257,0.002279297,0.000400218,0.002560923],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8761826,"threshold_uncertainty_score":0.9993616,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1993799354","doi":"10.1159/000163037","title":"Role of Intestinal Mucins in Innate Host Defense Mechanisms against Pathogens","year":2008,"lang":"en","type":"review","venue":"Journal of Innate Immunity","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":322,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Mucin; Mucus; Biology; Innate immune system; Effector; Secretion; Host (biology); Microbiology; Cell biology; Immunology; Genetics; Immune system; Biochemistry; Ecology","authors":[{"name":"Poonam Dharmani","is_ca":true},{"name":"Vikas Srivastava","is_ca":true},{"name":"Vanessa Kissoon‐Singh","is_ca":true},{"name":"Kris Chadee","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03399476364795063,"gpt":0.2977318625181083,"spread":0.2637370988701577,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001348167,0.0007210121,0.004307501,0.001648968,0.0001111675,0.00001233234,0.0006137397,0.0006010412,0.00002041742],"category_scores_gemma":[0.00166926,0.0005529263,0.001041268,0.001041878,0.0003303818,0.0001564633,0.0003843093,0.004397347,0.00002130388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000522254,"about_ca_system_score_gemma":0.0008092427,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005927475,"about_ca_topic_score_gemma":0.00003267168,"domain_scores_codex":[0.9943878,0.000997321,0.00315887,0.0002829971,0.0005522547,0.0006207754],"domain_scores_gemma":[0.9945276,0.0003378162,0.003103007,0.0006582499,0.001123487,0.000249828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001708845,0.004186214,0.009776472,0.01273259,0.008347435,0.008684457,0.004639064,0.00001264655,0.007018041,0.00008594069,0.0007012603,0.942107],"study_design_scores_gemma":[0.01533738,0.0139452,0.04643565,0.2285711,0.009365615,0.07861532,0.00272867,0.00003705789,0.001117494,0.0003940908,0.6011289,0.002323463],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0956478,0.9026716,0.0000301752,0.0001251639,0.000412257,0.0005439377,0.00006824105,0.00002319844,0.0004776063],"genre_scores_gemma":[0.01173672,0.9864089,0.001341678,0.0002133885,0.0001227997,0.00001282398,0.00004054596,0.00009306725,0.00003007968],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9397836,"threshold_uncertainty_score":0.9996922,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2138543113","doi":"10.3748/wjg.v16.i19.2323","title":"Safety of the long-term use of proton pump inhibitors","year":2010,"lang":"en","type":"review","venue":"World Journal of Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":320,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Omeprazole; Internal medicine; Gastroenterology; Lansoprazole; Proton-pump inhibitor; Discontinuation; Helicobacter pylori; Gastritis; Pantoprazole; Peptic; Adverse effect; Intensive care medicine","authors":[{"name":"A. B. R. Thomson","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03518426813805879,"gpt":0.3059733962499428,"spread":0.270789128111884,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009177027,0.0006911134,0.005017039,0.001114364,0.00007129879,0.00001064761,0.0007585622,0.0005104991,0.00008028068],"category_scores_gemma":[0.0004715816,0.0004146976,0.001928251,0.0005176624,0.001167955,0.0001453432,0.0004690304,0.003537572,0.000005428231],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000181834,"about_ca_system_score_gemma":0.0003474847,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006342068,"about_ca_topic_score_gemma":0.000207028,"domain_scores_codex":[0.9936602,0.0009016671,0.003767848,0.0003795368,0.0005853202,0.0007054494],"domain_scores_gemma":[0.9918877,0.0002796923,0.005831041,0.0009234518,0.0008305673,0.000247556],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003985167,0.000832701,0.8946556,0.009847946,0.004977962,0.0002567518,0.000127147,0.000002201061,0.0001098129,0.000007005606,0.0009579087,0.08423983],"study_design_scores_gemma":[0.00636387,0.008372278,0.1646055,0.05195024,0.01251262,0.0123776,0.00001300363,6.887227e-7,0.0001614153,0.000006191874,0.7433444,0.0002921767],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.2066742,0.7815349,0.00009907591,0.002397146,0.004889552,0.004151457,0.0001552181,0.00002702918,0.00007143152],"genre_scores_gemma":[0.007486717,0.9905399,0.0004019708,0.000385227,0.0006725876,0.00004258886,0.00001955535,0.0001113303,0.0003400854],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7423865,"threshold_uncertainty_score":0.9998305,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2162888767","doi":"10.1073/pnas.1100959108","title":"Carcinogenic bacterial pathogen <i>Helicobacter pylori</i> triggers DNA double-strand breaks and a DNA damage response in its host cells","year":2011,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":310,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Biology; DNA damage; DNA repair; Helicobacter pylori; Carcinogenesis; DNA; Molecular biology; Cancer; Genetics","authors":[{"name":"Isabella M. Toller","is_ca":true},{"name":"Kai J. Neelsen","is_ca":true},{"name":"Martin Steger","is_ca":true},{"name":"Mara L. Hartung","is_ca":true},{"name":"Michael O. Hottiger","is_ca":false},{"name":"Manuel Stucki","is_ca":false},{"name":"Behnam Kalali","is_ca":false},{"name":"Markus Gerhard","is_ca":false},{"name":"Alessandro A. Sartori","is_ca":true},{"name":"Massimo Lopes","is_ca":true},{"name":"Anne Müller","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05013434037637332,"gpt":0.2795085448566741,"spread":0.2293742044803008,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002024157,0.0002072579,0.0004058268,0.0003755025,0.0001371783,0.00001778532,0.0004465068,0.0001944775,0.00002736549],"category_scores_gemma":[0.0003189707,0.0001441344,0.00009564231,0.0007085924,0.001121395,0.0004386613,0.0001992876,0.0003430367,0.00000291535],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006826533,"about_ca_system_score_gemma":0.00007670218,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001568455,"about_ca_topic_score_gemma":9.019015e-7,"domain_scores_codex":[0.997856,0.00003159366,0.000582079,0.0004272202,0.0007516849,0.0003514042],"domain_scores_gemma":[0.999038,0.0001245521,0.0003846445,0.00002073994,0.0003265336,0.0001054595],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.003983345,0.00009603328,0.06025945,0.00006465695,0.00006530224,3.288314e-7,0.001942126,3.059691e-7,0.9333106,0.0001434423,0.0001021213,0.00003225461],"study_design_scores_gemma":[0.002094746,0.0003058782,0.5577673,0.0001162981,0.00005952062,0.00003463947,0.0002050659,0.00001326376,0.4390975,0.0001217636,0.0001037931,0.00008023009],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995324,0.0001012061,7.377317e-8,0.002690638,0.00006520965,0.0004804026,0.000067337,0.0000156104,0.00125551],"genre_scores_gemma":[0.9990161,0.00008034561,0.0002494121,0.0004539303,0.00008246095,0.00002227316,4.670074e-7,0.0000107457,0.00008424857],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4975079,"threshold_uncertainty_score":0.5877632,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2131119810","doi":"10.1097/mpg.0b013e3182227e90","title":"Evidence‐based Guidelines From ESPGHAN and NASPGHAN for <i>Helicobacter pylori</i> Infection in Children","year":2011,"lang":"en","type":"article","venue":"Journal of Pediatric Gastroenterology and Nutrition","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":308,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta; SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Helicobacter pylori; MEDLINE; Family medicine; Evidence-based practice; Helicobacter pylori infection; Test (biology); Delphi method; Evidence-based medicine; Pediatrics; Systematic review; Alternative medicine; Pathology; Internal medicine","authors":[{"name":"Sibylle Koletzko","is_ca":false},{"name":"Nicola L. Jones","is_ca":true},{"name":"Karen J. Goodman","is_ca":true},{"name":"Benjamin D. Gold","is_ca":false},{"name":"Marion Rowland","is_ca":false},{"name":"Samy Cadranel","is_ca":false},{"name":"Sonny K. F. Chong","is_ca":false},{"name":"Richard B. Colletti","is_ca":false},{"name":"Thomas Casswall","is_ca":false},{"name":"Yoram Elitsur","is_ca":false},{"name":"Jeannette Guarner","is_ca":false},{"name":"Nicolas Kalach","is_ca":false},{"name":"Armando Madrazo","is_ca":false},{"name":"Françis Mégraud","is_ca":false},{"name":"Giuseppina Oderda","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05901658997506577,"gpt":0.2921375368752993,"spread":0.2331209469002335,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005403411,0.0002141539,0.0005367673,0.0005638194,0.00006594961,0.00001144291,0.00006301633,0.0002099896,0.00001251707],"category_scores_gemma":[0.0003197282,0.0001851313,0.0001181877,0.0001337434,0.0001122681,0.00033099,0.00003787938,0.0003869455,0.000001005644],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004795895,"about_ca_system_score_gemma":0.000032752,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000752009,"about_ca_topic_score_gemma":0.00007332158,"domain_scores_codex":[0.9983076,0.0001420933,0.0008268479,0.0002664799,0.0001342346,0.0003227513],"domain_scores_gemma":[0.998707,0.0001171481,0.0004544652,0.0001122189,0.0004505681,0.0001586271],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.006134709,0.0003920959,0.9911118,0.00006055734,0.0001836827,0.00001952858,0.0001049408,6.189254e-7,0.0003573274,0.000001905407,0.0009724052,0.0006604958],"study_design_scores_gemma":[0.008767989,0.006772062,0.9824533,0.0002306712,0.0007442722,0.0004341229,0.00002611026,0.00004315097,0.0001959571,0.0001853207,0.00007406919,0.00007294172],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913883,0.002682532,0.002224581,0.002877677,0.0003345781,0.0004495669,0.00002430418,0.00001615724,0.000002261412],"genre_scores_gemma":[0.9795998,0.01176533,0.005717468,0.001547301,0.00128873,0.00003879533,0.00002056856,0.00001832343,0.000003683066],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01178855,"threshold_uncertainty_score":0.7549437,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2030469355","doi":"10.1097/00005176-200011000-00007","title":"Helicobacter pylori Infection in Children: Recommendations for Diagnosis and Treatment","year":2000,"lang":"en","type":"article","venue":"Journal of Pediatric Gastroenterology and Nutrition","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":298,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Hospital for Sick Children; British Columbia Children's Hospital","funders":"","keywords":"Medicine; Helicobacter pylori; Helicobacter Infections; Helicobacter pylori infection; Spirillaceae; Immunology; Internal medicine; Gastritis","authors":[{"name":"Benjamin D. Gold","is_ca":false},{"name":"Richard B. Colletti","is_ca":false},{"name":"Myles B. Abbott","is_ca":false},{"name":"Steven J. Czinn","is_ca":false},{"name":"Yoram Elitsur","is_ca":false},{"name":"Eric Hassall","is_ca":true},{"name":"Colin Macarthur","is_ca":true},{"name":"John Snyder","is_ca":false},{"name":"Philip M. Sherman","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01756815433359657,"gpt":0.2714278333695426,"spread":0.253859679035946,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001939589,0.000153149,0.0003827345,0.0004066149,0.00007725556,0.00001051756,0.00002382199,0.0001254538,0.00003936289],"category_scores_gemma":[0.00003505897,0.000130782,0.00008965881,0.0001075821,0.00006075118,0.0001705854,0.00001025644,0.0002094162,0.000001618237],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008338944,"about_ca_system_score_gemma":0.00001329638,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000195932,"about_ca_topic_score_gemma":0.00005288454,"domain_scores_codex":[0.9989334,0.00009349434,0.0004911417,0.0001743828,0.00006145801,0.000246113],"domain_scores_gemma":[0.9994654,0.00007110181,0.0001828444,0.00006504392,0.0001046751,0.0001109571],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002241638,0.0008421322,0.9866186,0.00002433285,0.0002044408,0.000008229091,0.0001084834,0.000001029287,0.0000143768,0.000001384249,0.001230942,0.008704407],"study_design_scores_gemma":[0.01061773,0.01041022,0.9756353,0.00004226767,0.0005492094,0.001030163,0.00001834789,0.00000849451,0.00002186524,0.00005096065,0.001568615,0.00004682847],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9890557,0.0007430856,0.00006214051,0.009479684,0.0001477421,0.0004726192,0.00002463547,0.00001010243,0.000004281223],"genre_scores_gemma":[0.9255879,0.07202304,0.00091381,0.0005091832,0.0007862421,0.0001188667,0.00003333949,0.00001133342,0.00001629706],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07127996,"threshold_uncertainty_score":0.5333137,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2121624248","doi":"10.3390/pathogens2010055","title":"Goblet Cells and Mucins: Role in Innate Defense in Enteric Infections","year":2013,"lang":"en","type":"review","venue":"Pathogens","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":294,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"Mucin; Goblet cell; Mucus; Biology; Innate immune system; Mucin 2; Secretion; Glycoprotein; Cell biology; Immunology; Epithelium; Microbiology; Immune system; Molecular biology; Biochemistry; Gene expression","authors":[{"name":"Janice Kim","is_ca":true},{"name":"Waliul I. Khan","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02778615230064977,"gpt":0.287493634449513,"spread":0.2597074821488632,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002782354,0.0004829824,0.001857603,0.0008335146,0.00004256409,0.00001743411,0.00009264062,0.0004289188,0.00005019097],"category_scores_gemma":[0.000139646,0.0004033585,0.0001926435,0.0006334766,0.0001109738,0.00006358138,0.000199731,0.0009532151,0.0002787902],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002275265,"about_ca_system_score_gemma":0.00008879298,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001354181,"about_ca_topic_score_gemma":0.0003923834,"domain_scores_codex":[0.9976304,0.0003023506,0.0008200944,0.0005695088,0.0001192185,0.000558415],"domain_scores_gemma":[0.999072,0.0001155701,0.0002087361,0.0003903752,0.0000631053,0.0001502208],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003159345,0.0009470913,0.09968451,0.01144609,0.0008876687,0.001055701,0.001637768,0.000002318498,0.0002715501,0.00001477373,0.0008505959,0.8831704],"study_design_scores_gemma":[0.001283755,0.0004250284,0.007669185,0.009009619,0.0009038998,0.0005759166,0.00009366445,0.00001241433,0.000002460873,0.00001494654,0.9796641,0.0003450433],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.03264876,0.9647312,0.000004370689,0.00008255785,0.0002867136,0.001379726,0.0001077844,0.00005752058,0.0007013423],"genre_scores_gemma":[0.001150509,0.9975949,0.000152808,0.0001924529,0.00008294365,0.0004754024,0.00007755467,0.00006744154,0.0002060213],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9788135,"threshold_uncertainty_score":0.9998418,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3005828812","doi":"10.1016/j.cgh.2020.01.046","title":"Dietary Guidance From the International Organization for the Study of Inflammatory Bowel Diseases","year":2020,"lang":"en","type":"review","venue":"Clinical Gastroenterology and Hepatology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":289,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Medicine; Ulcerative colitis; Inflammatory bowel disease; Disease; Pathogenesis; Microbiome; Inflammatory Bowel Diseases; Crohn's disease; Dietary management; Immunology; Internal medicine; Bioinformatics","authors":[{"name":"Arie Levine","is_ca":false},{"name":"Jonathan M. Rhodes","is_ca":false},{"name":"James O. Lindsay","is_ca":false},{"name":"María T. Abreu","is_ca":false},{"name":"Michael A. Kamm","is_ca":false},{"name":"Christoph Gasché","is_ca":false},{"name":"Mark S. Silverberg","is_ca":true},{"name":"Uma Mahadevan","is_ca":false},{"name":"Rotem Sigall Boneh","is_ca":false},{"name":"Oriana M. Damas","is_ca":false},{"name":"Graeme Syme","is_ca":false},{"name":"Gina Trakman","is_ca":false},{"name":"Chu K Yao","is_ca":false},{"name":"Stefanie Stockhamer","is_ca":true},{"name":"Muhammad B. Hammami","is_ca":false},{"name":"Luis C. Garces","is_ca":false},{"name":"Gerhard Rogler","is_ca":false},{"name":"Ioannis E. Κoutroubakis","is_ca":false},{"name":"Ashwin N. Ananthakrishnan","is_ca":false},{"name":"Liam McKeever","is_ca":false},{"name":"James D. Lewis","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06750491649567228,"gpt":0.3644427197216371,"spread":0.2969378032259647,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004016536,0.0004132362,0.002324502,0.00006056217,0.0001870702,0.00001171831,0.0006712106,0.0004387173,0.00003885068],"category_scores_gemma":[0.001856903,0.0002288231,0.0003981136,0.0001038679,0.001081516,0.00003597159,0.0006535013,0.0009736213,0.00001401165],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003583815,"about_ca_system_score_gemma":0.0001421973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001834216,"about_ca_topic_score_gemma":0.0001744885,"domain_scores_codex":[0.99626,0.00080552,0.001735356,0.000716027,0.000144808,0.0003382908],"domain_scores_gemma":[0.9949678,0.003142198,0.0008980712,0.0005837191,0.0002732696,0.0001349402],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001032596,0.0005158156,0.9211454,0.0004041348,0.005623531,0.00005510272,0.0001521133,2.647663e-7,1.295492e-7,0.000008883587,0.00551106,0.06555094],"study_design_scores_gemma":[0.003937902,0.004462386,0.5331307,0.0006535876,0.01090424,0.0001831317,0.0002842054,0.00005730273,5.991539e-8,0.00002843075,0.4462329,0.0001251858],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.1110436,0.8725997,0.0001338758,0.01131229,0.002095079,0.00238987,0.0003607448,0.00006040232,0.000004515266],"genre_scores_gemma":[0.02327986,0.9703556,0.00006551961,0.004810982,0.0008466298,0.0002298301,0.0003417463,0.00005549182,0.000014323],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.4407218,"threshold_uncertainty_score":0.9331135,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2935703421","doi":"10.1053/j.gastro.2019.04.011","title":"Reconciliation of Recent Helicobacter pylori Treatment Guidelines in a Time of Increasing Resistance to Antibiotics","year":2019,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":282,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Clarithromycin; Medicine; Levofloxacin; Helicobacter pylori; Antibiotic resistance; Antibiotics; Rifabutin; Amoxicillin; Metronidazole; Proton-pump inhibitor; Adverse effect; Drug resistance; Intensive care medicine; Internal medicine; Combination therapy; Microbiology; Biology","authors":[{"name":"Carlo A Fallone","is_ca":true},{"name":"Steven F. Moss","is_ca":false},{"name":"Peter Malfertheiner","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07960194093431844,"gpt":0.3544047685233846,"spread":0.2748028275890662,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007760832,0.0007154454,0.00488708,0.00128019,0.0000215482,0.000006207852,0.0003211061,0.0005416301,0.00007780276],"category_scores_gemma":[0.0006631197,0.0005931172,0.0004944719,0.0006648484,0.0001662442,0.00005477705,0.0002237144,0.0004122928,0.0001125563],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007569804,"about_ca_system_score_gemma":0.0002582754,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005121143,"about_ca_topic_score_gemma":0.0003126377,"domain_scores_codex":[0.9946344,0.0006799463,0.00276882,0.0008246701,0.0003228402,0.000769328],"domain_scores_gemma":[0.99673,0.0002133276,0.001265865,0.0009316148,0.0006850384,0.0001741341],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0118709,0.00198694,0.5125717,0.02354719,0.006772664,0.0001988423,0.000861472,0.00002033385,0.000655014,0.00000823165,0.003765588,0.4377411],"study_design_scores_gemma":[0.006066236,0.009075987,0.02210885,0.02891669,0.004507479,0.0004032486,0.00003532045,0.000009766803,0.0001146949,0.000004386988,0.9283503,0.0004070804],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.2616541,0.7302976,0.00006708313,0.002246899,0.0009022086,0.003988517,0.0004679729,0.00006765567,0.0003079896],"genre_scores_gemma":[0.0005617048,0.9944627,0.003032034,0.0005187468,0.0001653885,0.00003184314,0.0002853741,0.00009380239,0.0008483586],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9245847,"threshold_uncertainty_score":0.999652,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2106136875","doi":"10.1136/gutjnl-2013-305178","title":"Gastric colonisation with a restricted commensal microbiota replicates the promotion of neoplastic lesions by diverse intestinal microbiota in the <i>Helicobacter pylori</i> INS-GAS mouse model of gastric carcinogenesis","year":2013,"lang":"en","type":"article","venue":"Gut","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":281,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Columbia College","funders":"National Center for Research Resources; National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health","keywords":"Colonisation; Biology; Dysbiosis; Helicobacter pylori; Cancer; Immunology; Gastritis; Proinflammatory cytokine; Gastric mucosa; Lactobacillus; Microbiology; Inflammation; Stomach; Gut flora; Colonization; Bacteria; Genetics","authors":[{"name":"Kvin Lertpiriyapong","is_ca":false},{"name":"Mark T. Whary","is_ca":false},{"name":"Sureshkumar Muthupalani","is_ca":false},{"name":"Jennifer L Lofgren","is_ca":false},{"name":"Eric R. Gamazon","is_ca":false},{"name":"Feng Yan","is_ca":false},{"name":"Zhongming Ge","is_ca":false},{"name":"Timothy C. Wang","is_ca":true},{"name":"James G. Fox","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02634191696143237,"gpt":0.2346731816638559,"spread":0.2083312647024235,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002577964,0.0003150782,0.0004828349,0.0002794513,0.0001529745,0.00002143318,0.0003499899,0.0001429529,0.00001268606],"category_scores_gemma":[0.0002500148,0.0001855014,0.00008781803,0.0009343001,0.0004851123,0.0001157115,0.0001595167,0.0004830346,0.00001582768],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001329376,"about_ca_system_score_gemma":0.0001296118,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001132254,"about_ca_topic_score_gemma":0.0001838243,"domain_scores_codex":[0.9978971,0.0002726472,0.0006872108,0.0004055535,0.0002718852,0.0004655862],"domain_scores_gemma":[0.9980271,0.000296663,0.0004446824,0.0006753868,0.0004743059,0.00008180449],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003630018,0.0005870679,0.3122275,0.00005904153,0.0001384988,0.000003846656,0.001042241,0.0001341717,0.6808222,0.000005971543,0.004380919,0.0002355164],"study_design_scores_gemma":[0.004504946,0.002975777,0.9570779,0.0003138739,0.0007821238,0.0004077399,0.001181743,0.002773206,0.02964374,0.00001730048,0.00007091784,0.0002508025],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9912219,0.00007110395,0.0005561195,0.006386558,0.00003552496,0.001515348,0.00014393,0.00003840948,0.0000310749],"genre_scores_gemma":[0.9979702,0.00008491425,0.000992532,0.0005144364,0.00002731462,0.0001677997,0.0001343217,0.00003219601,0.00007624466],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6511784,"threshold_uncertainty_score":0.7564527,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1276209945","doi":"10.1155/2001/367832","title":"The Updated Sydney System: Classification and Grading of Gastritis as the Basis of Diagnosis and Treatment","year":2001,"lang":"en","type":"review","venue":"Canadian Journal of Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":269,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"","keywords":"Grading (engineering); Gastritis; Medicine; Internal medicine; Engineering; Helicobacter pylori; Civil engineering","authors":[{"name":"Manfred Stolte","is_ca":false},{"name":"Alexander Meining","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04719747651208836,"gpt":0.2897560512734366,"spread":0.2425585747613482,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006096407,0.0003882781,0.002151691,0.000533671,0.0002167478,0.00002288175,0.0002651618,0.0002456467,0.00001246185],"category_scores_gemma":[0.0002187071,0.0002179157,0.0003362153,0.0002083398,0.0009844825,0.00005111724,0.00003732345,0.0005344467,0.000001357682],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004408884,"about_ca_system_score_gemma":0.0005485705,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001320355,"about_ca_topic_score_gemma":0.009896781,"domain_scores_codex":[0.996928,0.0006583437,0.001452052,0.0002577836,0.0001606543,0.0005432091],"domain_scores_gemma":[0.9968361,0.0003423658,0.001602171,0.0003705263,0.0003338614,0.0005149854],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006427946,0.0001155439,0.4955834,0.003027346,0.008646523,0.0008077176,0.0005680354,6.120375e-7,0.000005203625,0.0001272625,0.003183235,0.4872923],"study_design_scores_gemma":[0.005018147,0.01886527,0.07567747,0.02113499,0.01753574,0.05199088,0.002163514,0.00001162986,0.00001129152,0.00001330352,0.8073318,0.0002459622],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.1409592,0.8540057,0.00001043622,0.003612019,0.00042433,0.0007744882,0.0001473451,0.000005227671,0.00006118222],"genre_scores_gemma":[0.0875162,0.9120446,0.00004491369,0.00011746,0.0001319731,0.00005459487,0.00002340861,0.00003510015,0.00003176944],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8041486,"threshold_uncertainty_score":0.8886343,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1938376174","doi":"10.1002/14651858.cd003840.pub5","title":"Eradication therapy for peptic ulcer disease in <i>Helicobacter pylori</i> -positive people","year":2016,"lang":"en","type":"review","venue":"Cochrane Database of Systematic Reviews","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":265,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"National Institute for Health and Care Research; World Health Organization","keywords":"Helicobacter pylori; Peptic ulcer; Gastroenterology; Medicine; Disease; Internal medicine; Peptic","authors":[{"name":"Alexander C. Ford","is_ca":false},{"name":"Kurinchi Selvan Gurusamy","is_ca":false},{"name":"Brendan Delaney","is_ca":false},{"name":"David Forman","is_ca":false},{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06742538264870475,"gpt":0.3646225728461706,"spread":0.2971971901974658,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002958961,0.001061982,0.01048256,0.0005822653,0.00007414458,0.00002356256,0.0005422333,0.0002959486,0.00009811841],"category_scores_gemma":[0.00339145,0.0006068015,0.001461184,0.0006178493,0.000173869,0.0002275134,0.000134557,0.0004293855,0.0004542808],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003418313,"about_ca_system_score_gemma":0.0003664965,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001438688,"about_ca_topic_score_gemma":0.00001298105,"domain_scores_codex":[0.99154,0.001566793,0.004697233,0.001022044,0.0005332846,0.0006406558],"domain_scores_gemma":[0.9920911,0.001710215,0.002936595,0.002417493,0.0004887463,0.0003558102],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","study_design_scores_codex":[0.0001740083,0.0003327141,0.0001737057,0.9714558,0.0009604602,0.00002636661,0.0001851529,2.086906e-8,0.00001129937,0.00003563792,0.002207271,0.02443757],"study_design_scores_gemma":[0.001936577,0.0002485375,0.0001594889,0.8492546,0.004922675,0.00007937154,0.00001416558,0.000004436374,0.000001734276,0.000003890062,0.1429976,0.000376903],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00004968539,0.9691969,0.0005999326,0.0003079122,0.0004183897,0.02720293,0.002134288,0.00004002984,0.00004996342],"genre_scores_gemma":[0.00002498271,0.9832689,0.0004304613,0.0002679209,0.0002996349,0.01206645,0.0032467,0.0001403521,0.0002546481],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.1407903,"threshold_uncertainty_score":0.9996383,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2625806186","doi":"10.1002/ijc.30835","title":"Global patterns and trends in stomach cancer incidence: Age, period and birth cohort analysis","year":2017,"lang":"en","type":"article","venue":"International Journal of Cancer","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":253,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Cohort; Demography; Incidence (geometry); Cohort effect; Medicine; China; Geography; Cohort study; Internal medicine","authors":[{"name":"Ganfeng Luo","is_ca":false},{"name":"Yanting Zhang","is_ca":false},{"name":"P Guo","is_ca":false},{"name":"Li Wang","is_ca":false},{"name":"Yuanwei Huang","is_ca":false},{"name":"Ke Li","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01632032235902299,"gpt":0.3682762105757088,"spread":0.3519558882166858,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002020975,0.0001289008,0.0004229721,0.000407641,0.00006466508,0.00008028455,0.000208641,0.0000657076,0.0001806394],"category_scores_gemma":[0.00006954625,0.0001038881,0.00009229188,0.0001199507,0.0001754994,0.0002236294,0.0001222507,0.0002252849,3.492076e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003242761,"about_ca_system_score_gemma":0.00006424257,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0031149,"about_ca_topic_score_gemma":0.01945424,"domain_scores_codex":[0.9988363,0.0000282919,0.0003805449,0.0001777703,0.0004149051,0.0001621938],"domain_scores_gemma":[0.9989296,0.0000139142,0.000410577,0.0001269279,0.0004024575,0.000116486],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003904699,0.00003593407,0.9603185,0.000006168851,0.004414651,0.0006752529,0.0003027095,0.00004930518,0.00004442346,0.000006486431,0.0001555894,0.03360051],"study_design_scores_gemma":[0.002104337,0.0001066138,0.9956988,0.0001603355,0.000799309,0.0002381528,0.00006803309,0.0001623839,0.00001186253,0.00001932153,0.0005651532,0.0000656969],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9881175,0.0018202,0.0000603409,0.009155969,0.0005457306,0.00004243037,0.00008934561,0.00000434638,0.0001641884],"genre_scores_gemma":[0.9950133,0.003852461,0.00006466672,0.0005213508,0.0003243976,0.000009988882,0.000003688571,0.000006823697,0.0002033341],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0353803,"threshold_uncertainty_score":0.9984382,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2788189477","doi":"10.1016/s2468-1253(18)30037-2","title":"Effects of gastroprotectant drugs for the prevention and treatment of peptic ulcer disease and its complications: a meta-analysis of randomised trials","year":2018,"lang":"en","type":"review","venue":"The Lancet. Gastroenterology & hepatology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":249,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Population Health Research Institute","funders":"Medical Research Council; British Heart Foundation","keywords":"Medicine; Clinical trial; Internal medicine; Meta-analysis; Misoprostol; Randomized controlled trial; MEDLINE; Disease; Drug class; Drug; Pharmacology","authors":[{"name":"Benjamin Scally","is_ca":false},{"name":"Jonathan Emberson","is_ca":false},{"name":"Enti Spata","is_ca":false},{"name":"Christina Reith","is_ca":false},{"name":"Kelly Davies","is_ca":false},{"name":"Heather Halls","is_ca":false},{"name":"Lisa Holland","is_ca":false},{"name":"Kate Wilson","is_ca":false},{"name":"Neeraj Bhala","is_ca":false},{"name":"C J Hawkey","is_ca":false},{"name":"Marc C. Hochberg","is_ca":false},{"name":"Richard H. Hunt","is_ca":true},{"name":"Loren Laine","is_ca":false},{"name":"Ángel Lanas","is_ca":false},{"name":"Carlo Patrono","is_ca":false},{"name":"Colin Baigent","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1196768477314027,"gpt":0.3741854697291896,"spread":0.2545086219977869,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001865624,0.0007187453,0.01337596,0.0005725664,0.0001412655,0.000006770144,0.0003515561,0.0003185082,0.0000224709],"category_scores_gemma":[0.0006453321,0.0003645818,0.003326054,0.0003530552,0.001430119,0.00003129668,0.0001660717,0.0002915797,0.000001437322],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007422776,"about_ca_system_score_gemma":0.0001300353,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002536968,"about_ca_topic_score_gemma":0.0001001784,"domain_scores_codex":[0.9925622,0.003248029,0.002541808,0.0007970265,0.0002106621,0.0006403176],"domain_scores_gemma":[0.9907614,0.004513182,0.00313894,0.001009113,0.0004251195,0.0001522729],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.03466203,0.001361273,0.0121571,0.01484078,0.9203168,0.00001801536,0.0006305608,0.000003549333,0.0001317806,0.00007448594,0.0003096177,0.01549404],"study_design_scores_gemma":[0.02298418,0.006152566,0.006283661,0.0005638205,0.9557593,0.0001300876,0.00003057597,0.0003267376,0.00001919711,0.00004847797,0.007565754,0.0001356769],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.05437336,0.9306153,0.001639965,0.001715278,0.0001462021,0.01085263,0.0006311343,0.00002331695,0.000002831394],"genre_scores_gemma":[0.08774111,0.9044703,0.0003333476,0.0002749159,0.0001508083,0.00676293,0.0001707032,0.00005436659,0.00004148683],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.0354425,"threshold_uncertainty_score":0.9998806,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2094310225","doi":"10.1038/ncpgasthep0393","title":"Peptic ulcer disease today","year":2006,"lang":"en","type":"review","venue":"Nature Clinical Practice Gastroenterology &#38 Hepatology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":248,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Hamilton Health Sciences; McMaster University Medical Centre","funders":"","keywords":"Medicine; Aspirin; Helicobacter pylori; Disease; Peptic ulcer; Peptic; Internal medicine; Helicobacter pylori infection; Proton-pump inhibitor; Gastroenterology; Nonsteroidal; Incidence (geometry); Drug; Intensive care medicine; Pharmacotherapy; Pharmacology","authors":[{"name":"Yuhong Yuan","is_ca":true},{"name":"Ireneusz T. Padol","is_ca":true},{"name":"Richard H. Hunt","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05132400365576326,"gpt":0.4305523444244769,"spread":0.3792283407687137,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity"],"category_scores_codex":[0.002811407,0.002116218,0.009833397,0.000925911,0.0003022948,0.00005236613,0.001139781,0.007486928,0.000344425],"category_scores_gemma":[0.020033,0.001727141,0.003206704,0.0006712191,0.002325896,0.000376191,0.001061875,0.01928175,0.001701225],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005439941,"about_ca_system_score_gemma":0.001227252,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002170326,"about_ca_topic_score_gemma":0.00006774667,"domain_scores_codex":[0.9823444,0.005428247,0.005408288,0.003351921,0.0007916251,0.002675463],"domain_scores_gemma":[0.9844411,0.006924621,0.003375332,0.002667835,0.00113755,0.00145356],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.01399812,0.008126066,0.3471681,0.01226286,0.01954404,0.02877204,0.00003610039,0.000001033708,2.907667e-7,0.0002912888,0.3610881,0.2087119],"study_design_scores_gemma":[0.003775481,0.003395343,0.01041876,0.002219685,0.02339501,0.009040738,0.00001404927,0.000008908817,2.736923e-8,0.00004818074,0.9471408,0.0005430857],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001382645,0.9628636,0.0001340538,0.02269973,0.007718247,0.002680574,0.0002552058,0.0004832695,0.00178269],"genre_scores_gemma":[0.0008805404,0.9582655,0.00222962,0.03220993,0.003064185,0.0004560712,0.001482809,0.0003506905,0.00106067],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.5860526,"threshold_uncertainty_score":0.9991579,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1986802187","doi":"10.1053/j.gastro.2012.01.043","title":"Vacuolating Cytotoxin and Variants in Atg16L1 That Disrupt Autophagy Promote Helicobacter pylori Infection in Humans","year":2012,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":245,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"St. Michael's Hospital; Mount Sinai Hospital; Hospital for Sick Children; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Cancer Research UK; Canadian Association of Gastroenterology; Crohn's and Colitis Foundation of Canada","keywords":"Autophagy; ATG16L1; Microbiology; Helicobacter pylori; Helicobacter pylori infection; Biology; Genetics; Apoptosis","authors":[{"name":"Deepa Raju","is_ca":true},{"name":"Séamus Hussey","is_ca":true},{"name":"Michelle Ang","is_ca":true},{"name":"Mauricio R. Terebiznik","is_ca":true},{"name":"Michal Sibony","is_ca":true},{"name":"Esther Galindo‐Mata","is_ca":true},{"name":"Vijay Gupta","is_ca":false},{"name":"Steven R. Blanke","is_ca":false},{"name":"Alberto Delgado","is_ca":false},{"name":"Judith Romero–Gallo","is_ca":false},{"name":"Mahendra Singh Ramjeet","is_ca":true},{"name":"Heidi Mascarenhas","is_ca":true},{"name":"Richard M. Peek","is_ca":false},{"name":"Pelayo Correa","is_ca":false},{"name":"Cathy Streutker","is_ca":true},{"name":"Georgina L. Hold","is_ca":false},{"name":"Erdmutte Kunstmann","is_ca":false},{"name":"Tamotsu Yoshimori","is_ca":false},{"name":"Mark S. Silverberg","is_ca":true},{"name":"Stephen E. Girardin","is_ca":true},{"name":"Dana J. Philpott","is_ca":true},{"name":"Emad El‐Omar","is_ca":false},{"name":"Nicola L. Jones","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02263829839123574,"gpt":0.2766502510696285,"spread":0.2540119526783928,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006908614,0.0004055867,0.0007851888,0.0006017028,0.00008421824,0.00001834218,0.00009638373,0.0003070773,0.00006632396],"category_scores_gemma":[0.0001642303,0.0003847146,0.00008298144,0.0002485971,0.000201114,0.0004134678,0.000247968,0.0008885645,0.00003890073],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002477272,"about_ca_system_score_gemma":0.00001957016,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003052393,"about_ca_topic_score_gemma":0.001876025,"domain_scores_codex":[0.9968348,0.0003420754,0.0006640418,0.0005706982,0.0001800515,0.001408402],"domain_scores_gemma":[0.9990562,0.00005537349,0.0002400617,0.0003475356,0.00005146766,0.0002494211],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007181066,0.0004462854,0.9906369,0.0000567061,0.0001437327,0.0001041707,0.002369635,0.000004336852,0.004627765,0.0000125958,0.00004044423,0.0008393429],"study_design_scores_gemma":[0.004952692,0.001173962,0.9923625,0.0001353655,0.00008005369,0.0005268955,0.00008307631,0.0001361408,0.0002301793,0.00002434233,0.0001656495,0.0001291718],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963896,0.000130309,0.0004140618,0.001529407,0.0005985005,0.0006837804,0.000009344732,0.0000990897,0.0001459181],"genre_scores_gemma":[0.9974472,0.0001280207,0.0005661111,0.001327907,0.0002486666,0.0001351745,0.00003231154,0.00005055282,0.00006406661],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004397586,"threshold_uncertainty_score":0.9998605,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2160454557","doi":"10.1128/aac.01159-06","title":"Antiparasitic Drug Nitazoxanide Inhibits the Pyruvate Oxidoreductases of <i>Helicobacter pylori</i> , Selected Anaerobic Bacteria and Parasites, and <i>Campylobacter jejuni</i>","year":2006,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":242,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"Health Canada","keywords":"Thiamine pyrophosphate; Anaerobic bacteria; Campylobacter jejuni; Cofactor; Nitazoxanide; Entamoeba histolytica; Biochemistry; Biology; Microbiology; Pyruvate decarboxylation; Chemistry; Pyruvate dehydrogenase complex; Bacteria; Enzyme","authors":[{"name":"Paul S. Hoffman","is_ca":true},{"name":"Gary Sisson","is_ca":false},{"name":"Matthew A. Croxen","is_ca":false},{"name":"Kevin D. Welch","is_ca":false},{"name":"W. Dean Harman","is_ca":false},{"name":"Nunilo Cremades","is_ca":false},{"name":"Michael G. Morash","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007081957431604919,"gpt":0.2256319066722463,"spread":0.2185499492406414,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001807518,0.0004870323,0.0007300957,0.0001392898,0.0002571084,0.00008468432,0.0001179751,0.0001670736,0.00004045224],"category_scores_gemma":[0.00001943116,0.0003503911,0.00008129375,0.0003626609,0.000757554,0.0001903375,0.0001013051,0.0003061021,0.000005117329],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002660035,"about_ca_system_score_gemma":0.00003671162,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003944082,"about_ca_topic_score_gemma":0.0001162949,"domain_scores_codex":[0.9979479,0.0001055271,0.0005984915,0.0005899313,0.0001693206,0.0005888582],"domain_scores_gemma":[0.9989977,0.00006497345,0.000246277,0.0003270438,0.0002206573,0.0001432826],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000470721,0.0003601284,0.556985,0.0001475582,0.0005179919,0.00002362337,0.0005793755,5.735955e-7,0.4205726,0.00002520501,0.01908137,0.001235795],"study_design_scores_gemma":[0.004044154,0.0002958439,0.8943747,0.0002280475,0.0003023278,0.0003116744,0.00007484607,0.00001174052,0.09345208,0.00003440521,0.006567661,0.0003025701],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896666,0.0003566512,0.000007154513,0.009009188,0.0001500965,0.0005713799,0.00009226381,0.00006928375,0.00007733532],"genre_scores_gemma":[0.9865465,0.003213284,0.0004368076,0.009124709,0.00019773,0.00001154798,0.0001234634,0.00006441356,0.00028153],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3373896,"threshold_uncertainty_score":0.9998948,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2062600859","doi":"10.1053/j.gastro.2005.03.083","title":"Helicobacter pylori and MALT Lymphoma","year":2005,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":238,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"Helicobacter pylori; Lymphoma; DNA damage; MALT lymphoma; Cancer; Biology; Immunology; Virulence; Cancer research; Antigen; Gene; Genetics; DNA","authors":[{"name":"Pedro Farinha","is_ca":true},{"name":"Randy D. Gascoyne","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03310747405898449,"gpt":0.3082331877064234,"spread":0.2751257136474389,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002990336,0.001189426,0.004332916,0.0007032001,0.000135518,0.00003575348,0.0003323334,0.0009808714,0.0001982287],"category_scores_gemma":[0.0001014046,0.0009747568,0.0006716179,0.0002368537,0.0006267397,0.000114869,0.0005834299,0.0009896785,0.0005969665],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003300146,"about_ca_system_score_gemma":0.0001413029,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001059976,"about_ca_topic_score_gemma":0.00004772415,"domain_scores_codex":[0.9950768,0.0004068417,0.001389817,0.00131404,0.0002730478,0.001539453],"domain_scores_gemma":[0.9977084,0.000110943,0.0005540992,0.0009325314,0.000157769,0.0005362096],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000395808,0.000283493,0.01161997,0.003366169,0.002931404,0.0004207205,0.0000677921,5.730683e-8,0.000001232033,0.00001408413,0.00399522,0.976904],"study_design_scores_gemma":[0.00265468,0.001843543,0.006910312,0.002814048,0.003918852,0.01039687,0.00001351684,0.000001989625,1.755595e-7,0.000003113575,0.9711678,0.0002750963],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.005307407,0.990158,0.00004144967,0.001694129,0.0008648787,0.001189889,0.0001125205,0.0002454904,0.0003862871],"genre_scores_gemma":[0.000168615,0.9928798,0.0007577803,0.003208325,0.001255131,0.0003032492,0.000319731,0.0001921915,0.0009151865],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.976629,"threshold_uncertainty_score":0.9992703,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2144285906","doi":"10.1111/j.1572-0241.2005.41688.x","title":"Helicobacter pylori Eradication Has the Potential to Prevent Gastric Cancer: A State-of-the-Art Critique","year":2005,"lang":"en","type":"review","venue":"The American Journal of Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":235,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; McMaster University Medical Centre","funders":"","keywords":"Medicine; Helicobacter pylori; Cancer; Helicobacter Infections; State (computer science); Gastroenterology; Internal medicine","authors":[{"name":"Peter Malfertheiner","is_ca":false},{"name":"P. Sipponen","is_ca":false},{"name":"Michael Naumann","is_ca":false},{"name":"Paul Moayyedi","is_ca":true},{"name":"Françis Mégraud","is_ca":false},{"name":"Shudong Xiao","is_ca":false},{"name":"Kentaro Sugano","is_ca":false},{"name":"Olof Nyrén","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02278583617917369,"gpt":0.3185786974012201,"spread":0.2957928612220465,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001208255,0.0007051706,0.003479342,0.000495857,0.0002407956,0.00003589063,0.001537141,0.0001200244,0.00004811765],"category_scores_gemma":[0.0002064128,0.00034092,0.001325656,0.0007851255,0.001821383,0.00008806533,0.0004379386,0.002219207,0.00003559968],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004803477,"about_ca_system_score_gemma":0.00061329,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004859707,"about_ca_topic_score_gemma":0.0001127281,"domain_scores_codex":[0.9935659,0.002118466,0.002250815,0.0004476237,0.0006493939,0.0009677917],"domain_scores_gemma":[0.993747,0.0002384809,0.003989652,0.001071633,0.0006394375,0.0003138035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.006075226,0.0007516704,0.003951517,0.0006756513,0.008334546,0.00009796781,0.0009318906,0.0001869894,0.00007303542,0.000003106008,0.01815542,0.960763],"study_design_scores_gemma":[0.001550201,0.01765455,0.01406712,0.005843259,0.009389484,0.01485819,0.000158073,0.00001023745,0.00001061725,0.00001757618,0.9361849,0.0002557231],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.1388609,0.7504284,0.002140504,0.1033723,0.002160138,0.002795269,0.00018858,0.00003749536,0.00001643892],"genre_scores_gemma":[0.01414198,0.9769052,0.0004986452,0.006609826,0.001293593,0.0001908752,0.00001136086,0.0001116088,0.0002369674],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9605073,"threshold_uncertainty_score":0.9999043,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2099025296","doi":"10.1136/bmj.324.7344.1012","title":"Treating Helicobacter pylori infection in primary care patients with uninvestigated dyspepsia: the Canadian adult dyspepsia empiric treatment—Helicobacter pylori positive (CADET-Hp) randomised controlled trial","year":2002,"lang":"en","type":"article","venue":"BMJ","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":227,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"AstraZeneca (Canada); Dalhousie University; McMaster University","funders":"","keywords":"Cadet; Helicobacter pylori; Helicobacter pylori infection; Medicine; Gastroenterology; Internal medicine","authors":[{"name":"Naoki Chiba","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01541734503389451,"gpt":0.2481573563138239,"spread":0.2327400112799294,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003306397,0.0008933577,0.001683133,0.0007013513,0.0006059749,0.0001106921,0.0001898314,0.0005231939,0.0001159375],"category_scores_gemma":[0.0005410148,0.0005610973,0.0003451519,0.0009320776,0.0004193004,0.000325238,0.0000561126,0.0008759254,0.0001307854],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003071647,"about_ca_system_score_gemma":0.0004578982,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.02691733,"about_ca_topic_score_gemma":0.1311354,"domain_scores_codex":[0.9952018,0.0007996861,0.001301618,0.0008964964,0.0005930563,0.001207317],"domain_scores_gemma":[0.9968089,0.0003858917,0.0005744584,0.0007239534,0.0009211447,0.0005855931],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.1726574,0.0006219951,0.8163782,0.00004063929,0.002353978,0.0002204274,0.004818661,0.00002377497,0.0000782284,0.000008180857,0.0009120816,0.001886536],"study_design_scores_gemma":[0.4868961,0.003491419,0.5072796,0.0002525021,0.0009863754,0.00004111193,0.0001748676,0.0001008788,0.00007393743,0.000002329172,0.0003815417,0.0003194299],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9708414,0.0001626261,0.000003333357,0.006785222,0.0005964559,0.01251429,0.00009822125,0.0001669392,0.008831477],"genre_scores_gemma":[0.9923121,0.0001200736,0.0001129161,0.003154114,0.0006728305,0.002063599,0.0006666404,0.0001221847,0.0007755034],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3142387,"threshold_uncertainty_score":0.999684,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1996679509","doi":"10.1002/jso.20214","title":"Gastric cancer: New genetic developments","year":2005,"lang":"en","type":"article","venue":"Journal of Surgical Oncology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":220,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Cancer Agency","funders":"National Cancer Institute","keywords":"Medicine; Cancer; Etiology; Germline mutation; Helicobacter pylori; Population; CDH1; Incidence (geometry); Genetics; Gastroenterology; Pathology; Mutation; Internal medicine; Gene; Biology; Environmental health; Cadherin","authors":[{"name":"Henry T. Lynch","is_ca":false},{"name":"William M. Grady","is_ca":false},{"name":"Gianpaolo Suriano","is_ca":true},{"name":"David G. Huntsman","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02859173590949672,"gpt":0.3228178164854056,"spread":0.2942260805759089,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002504294,0.0001530569,0.0006928366,0.0002299896,0.00004368397,0.000005136359,0.0001299494,0.0001892259,0.0005374156],"category_scores_gemma":[0.00005518413,0.0001124522,0.0001448533,0.000232962,0.00009911041,0.00007318354,0.00006049675,0.0006096283,0.00008975367],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005691246,"about_ca_system_score_gemma":0.0008416866,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001155612,"about_ca_topic_score_gemma":0.00002446103,"domain_scores_codex":[0.998305,0.00009040233,0.0008049724,0.0001428849,0.0002674495,0.0003892678],"domain_scores_gemma":[0.9986758,0.0001179235,0.0003910917,0.0000919837,0.0002863422,0.000436866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001637683,0.0004836853,0.3511394,0.00001132389,0.0009591221,0.003636939,0.0003076991,0.0001020558,0.000631538,0.000008210506,0.03817894,0.6029034],"study_design_scores_gemma":[0.005422691,0.00170198,0.2067131,0.00005199018,0.0002137652,0.01025463,0.00002368301,0.000008771456,0.0000945514,0.000009858778,0.7754445,0.00006048203],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9442325,0.003072037,0.0001590203,0.04810226,0.0007261011,0.0001154027,0.000001273344,0.00001696827,0.003574409],"genre_scores_gemma":[0.9378437,0.01838626,0.03222227,0.004508441,0.003819194,0.000007425629,0.000001907661,0.00003565812,0.003175097],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7372656,"threshold_uncertainty_score":0.5884323,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1982725611","doi":"10.1038/ajg.2009.508","title":"Empiric Quadruple vs. Triple Therapy for Primary Treatment of Helicobacter pylori Infection: Systematic Review and Meta-Analysis of Efficacy and Tolerability","year":2009,"lang":"en","type":"review","venue":"The American Journal of Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":218,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"University of Michigan","keywords":"Medicine; Clarithromycin; Tolerability; Internal medicine; Meta-analysis; Helicobacter pylori; Metronidazole; Randomized controlled trial; Amoxicillin; Relative risk; Population; Adverse effect; Confidence interval; Antibiotics","authors":[{"name":"Jay Luther","is_ca":false},{"name":"Peter Higgins","is_ca":false},{"name":"Phillip Schoenfeld","is_ca":false},{"name":"Paul Moayyedi","is_ca":true},{"name":"Nimish Vakil","is_ca":false},{"name":"William D. Chey","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06788320069813206,"gpt":0.3612657760671155,"spread":0.2933825753689835,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.001535262,0.0006685443,0.02197795,0.000712888,0.00006305381,0.00000909554,0.0002418994,0.0001124826,0.00001741783],"category_scores_gemma":[0.0002146973,0.000333649,0.003285492,0.0006913503,0.0008866911,0.00005759837,0.00005815767,0.0003647828,4.249893e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001630849,"about_ca_system_score_gemma":0.0001133507,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000275317,"about_ca_topic_score_gemma":0.00001653462,"domain_scores_codex":[0.99379,0.001889847,0.003218331,0.0004200103,0.0002641426,0.0004177247],"domain_scores_gemma":[0.9914197,0.0008550973,0.006222288,0.0007732482,0.0005550378,0.0001746195],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.008335234,0.001684654,0.008313774,0.1672362,0.7847129,0.00001775564,0.0004636294,0.000002736478,0.000004005235,0.000001383319,0.0001093383,0.02911839],"study_design_scores_gemma":[0.002221187,0.0571463,0.01263768,0.005277681,0.9178908,0.001226807,0.00002148472,0.000001028653,7.900712e-7,0.000002618617,0.003456281,0.0001173043],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.06464153,0.9299113,0.0001037785,0.002169929,0.00005828007,0.003004344,0.0001004271,0.000008663182,0.000001717019],"genre_scores_gemma":[0.003780457,0.9939227,0.0002798981,0.001690704,0.00005659912,0.0001838134,0.00002763629,0.00003612211,0.00002206042],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.1619585,"threshold_uncertainty_score":0.9999115,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994968854","doi":"10.4161/auto.5.3.7663","title":"Effect of<i>Helicobacter pylori</i>’s vacuolating cytotoxin on the autophagy pathway in gastric epithelial cells","year":2009,"lang":"en","type":"article","venue":"Autophagy","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":216,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canadian Association of Gastroenterology","keywords":"Autophagy; ATG5; Vacuole; Biology; Intracellular; Helicobacter pylori; Cell biology; Autophagosome; Cytoplasm; Toxin; Apoptosis; Microbiology; Biochemistry","authors":[{"name":"Mauricio R. Terebiznik","is_ca":true},{"name":"Deepa Raju","is_ca":true},{"name":"Cristina Lourdes Vázquez","is_ca":false},{"name":"Karl Torbricki","is_ca":true},{"name":"Reshma Kulkarni","is_ca":false},{"name":"Steven R. Blanke","is_ca":false},{"name":"Tamotsu Yoshimori","is_ca":false},{"name":"María Isabel Colombo","is_ca":false},{"name":"Nicola L. Jones","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01053229926467805,"gpt":0.2491644541683578,"spread":0.2386321549036797,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001114157,0.0004953883,0.000932664,0.0003619823,0.0001226188,0.00002038558,0.0003028732,0.0002599091,0.0001028635],"category_scores_gemma":[0.0004702472,0.0003234785,0.0002626271,0.0006755792,0.0001583705,0.0001036791,0.00009139343,0.0009313429,0.0002046373],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001789455,"about_ca_system_score_gemma":0.00007834024,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000486734,"about_ca_topic_score_gemma":0.00000917027,"domain_scores_codex":[0.9967685,0.0005518338,0.0008193227,0.0005703846,0.0004543516,0.0008356055],"domain_scores_gemma":[0.9979293,0.0008318169,0.0002811964,0.0007071975,0.0001011136,0.0001493834],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002184991,0.0006862041,0.01850615,0.0001180401,0.0003797726,0.0006226381,0.00158536,0.0001074614,0.9221056,0.0004228549,0.0007634094,0.05251759],"study_design_scores_gemma":[0.004689663,0.007724417,0.2881595,0.0002407284,0.0001208951,0.00009633737,0.00003497651,0.0003671848,0.6974422,0.00007097697,0.0008216105,0.0002315127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944261,0.000156376,0.00004591992,0.00186473,0.0005082928,0.001001189,0.00002720023,0.0001411426,0.00182902],"genre_scores_gemma":[0.9963889,0.0000400573,0.000145721,0.002664371,0.0002823931,0.00006267706,0.00001232678,0.00004479363,0.0003587218],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2696533,"threshold_uncertainty_score":0.9999217,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1989604070","doi":"10.1038/sj.bjc.6605380","title":"Family history and the risk of gastric cancer","year":2009,"lang":"en","type":"article","venue":"British Journal of Cancer","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":214,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"St. Michael's Hospital; SickKids Foundation; Hospital for Sick Children; Women's College Hospital; University of Toronto","funders":"","keywords":"Odds ratio; Cancer; Family history; Etiology; Population; Genome-wide association study; Risk factor; Genetic association; Genetic predisposition; Case-control study; Genetics; Medicine; Biology; Oncology; Internal medicine; Genotype; Environmental health; Gene; Single-nucleotide polymorphism","authors":[{"name":"Mohammad Mehdi Yaghoobi","is_ca":true},{"name":"Raheleh Bijarchi","is_ca":true},{"name":"Steven A. Narod","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01212698157017592,"gpt":0.2527010709617574,"spread":0.2405740893915815,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003631825,0.00009049278,0.0004514038,0.00007653466,0.0000450761,0.000005827987,0.00008403296,0.00005320596,0.00006415072],"category_scores_gemma":[0.0001484384,0.00006812255,0.0001185582,0.00008886558,0.0003186601,0.00007017403,0.00001626161,0.0004792056,4.682157e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002009416,"about_ca_system_score_gemma":0.0001763631,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001164683,"about_ca_topic_score_gemma":0.000302424,"domain_scores_codex":[0.9989794,0.00009535416,0.0004252337,0.00009198416,0.0002324845,0.0001755188],"domain_scores_gemma":[0.9989379,0.00005098834,0.0004672083,0.00008013856,0.0003765892,0.00008719556],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00239016,0.0001319067,0.4769202,0.00004102199,0.001601691,0.0003696312,0.0007662771,0.0000497534,0.001487908,0.00001250869,0.05827934,0.4579496],"study_design_scores_gemma":[0.005753017,0.0003758886,0.9697493,0.0005163208,0.0007636676,0.001351821,0.00007072019,0.0000112928,0.00003701475,0.00004428185,0.02128144,0.00004518354],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7805951,0.2160341,0.00003321042,0.002488141,0.0003738364,0.00008937581,0.00001354491,0.000004457552,0.0003682782],"genre_scores_gemma":[0.8560725,0.1409439,0.0001459348,0.002213857,0.0003398849,0.000004707745,2.479981e-7,0.000008636807,0.000270262],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4928292,"threshold_uncertainty_score":0.2777957,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2616214073","doi":"10.1016/j.cgh.2017.05.023","title":"Gastric Cancer as Preventable Disease","year":2017,"lang":"en","type":"review","venue":"Clinical Gastroenterology and Hepatology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":214,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Population Health Research Institute; McMaster University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Medicine; Cancer; Helicobacter pylori; Field cancerization; Disease; Gastritis; Internal medicine; Gastroenterology; Atrophic gastritis; Incidence (geometry); Pathology","authors":[{"name":"Massimo Rugge","is_ca":false},{"name":"Robert M. Genta","is_ca":false},{"name":"Francesco Di Mario","is_ca":false},{"name":"Emad El‐Omar","is_ca":false},{"name":"Hashem B. El‐Serag","is_ca":false},{"name":"Matteo Fassan","is_ca":false},{"name":"Richard H. Hunt","is_ca":true},{"name":"Ernst J. Kuipers","is_ca":false},{"name":"Peter Malfertheiner","is_ca":false},{"name":"Kentaro Sugano","is_ca":false},{"name":"David Y. Graham","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1635652824491135,"gpt":0.4673088764030366,"spread":0.3037435939539231,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0007317738,0.0009417338,0.006361382,0.0003595511,0.0003541607,0.00003032403,0.0005464977,0.001373045,0.0003236659],"category_scores_gemma":[0.0009842289,0.0007503733,0.001140583,0.00009966696,0.002313649,0.0000938603,0.0008250428,0.002594913,0.0003637281],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001202265,"about_ca_system_score_gemma":0.000827472,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004763242,"about_ca_topic_score_gemma":0.000138094,"domain_scores_codex":[0.9935611,0.001176452,0.002120038,0.001622381,0.0001738947,0.001346064],"domain_scores_gemma":[0.9956264,0.0004737276,0.001290248,0.001326737,0.0001730012,0.001109865],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001301297,0.0004645409,0.6491829,0.003497144,0.003065144,0.001281109,0.000007734524,2.8741e-8,2.130722e-8,0.00003074109,0.005769627,0.3353997],"study_design_scores_gemma":[0.002610338,0.002734223,0.04436968,0.003867236,0.01010971,0.002861476,0.000004174515,0.000004947443,1.145498e-8,0.0000631653,0.9331269,0.0002481174],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01222211,0.9807565,0.00002089795,0.003102376,0.002101334,0.001266933,0.0001485488,0.0001187929,0.0002625214],"genre_scores_gemma":[0.0006714053,0.9912119,0.0001375134,0.004306369,0.0007926486,0.0005825168,0.0002018907,0.000103721,0.001992055],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9273573,"threshold_uncertainty_score":0.9999234,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}