{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":2444,"total_is_capped":false,"direct_labels_cover":7,"predictions_cover":2444,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"7d1a09d6fa1b","filters":{"topic":"Pancreatic and Hepatic Oncology Research"}},"results":[{"id":"W2117853299","doi":"10.1016/j.surg.2005.05.001","title":"Postoperative pancreatic fistula: An international study group (ISGPF) definition","year":2005,"lang":"en","type":"review","venue":"Surgery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":4277,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal University Hospital","funders":"","keywords":"Medicine; Pancreatic fistula; Grading (engineering); Anastomosis; Complication; Surgery; General surgery; Pancreaticoduodenectomy; Incidence (geometry); Pancreas; Internal medicine; Resection","authors":[{"name":"Claudio Bassi","is_ca":false},{"name":"Christos Dervenis","is_ca":false},{"name":"Giovanni Butturini","is_ca":false},{"name":"Abe Fingerhut","is_ca":false},{"name":"Charles J. Yeo","is_ca":false},{"name":"Jakob R. Izbicki","is_ca":false},{"name":"John P. Neoptolemos","is_ca":true},{"name":"Michael G. Sarr","is_ca":false},{"name":"William Traverso","is_ca":false},{"name":"Marcus Büchler","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2012963192709977,"gpt":0.4421217076488544,"spread":0.2408253883778567,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001411499,0.0008767082,0.002115843,0.004688956,0.0003121587,0.001062182,0.0007008567,0.0007211668,0.001332933],"category_scores_gemma":[0.002310246,0.0001754318,0.001232241,0.006154614,0.0006834688,0.001375812,0.0009341821,0.0008156403,0.0001920904],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007530507,"about_ca_system_score_gemma":0.002704251,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001453964,"about_ca_topic_score_gemma":0.002536015,"domain_scores_codex":[0.9994547,0.0001149414,0.0002176169,0.00007059091,0.0001051482,0.00003706035],"domain_scores_gemma":[0.9985452,0.0006818813,0.000484122,0.00002785209,0.0001925785,0.00006846223],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005131646,0.0001217409,0.01231876,0.07860734,0.0007273091,0.0005786786,0.0002531082,0.000302798,0.0006681528,0.004228254,0.04067763,0.8610032],"study_design_scores_gemma":[0.0005119558,0.0008404686,0.05261589,0.1385176,0.007197652,0.01278779,0.001747194,0.0003538589,0.001080194,0.004206471,0.7800277,0.000113151],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001135112,0.997136,0.0001289693,0.0005566918,0.000215129,0.0000337678,0.0001318843,0.000002585776,0.0006598665],"genre_scores_gemma":[0.006610697,0.9916577,0.0005646574,0.000415139,0.0002123779,0.00009058416,0.0002782108,0.000001068969,0.0001696197],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.004688956,"threshold_uncertainty_score":0.007464826,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2158134441","doi":"10.1200/jco.2006.07.9525","title":"Erlotinib Plus Gemcitabine Compared With Gemcitabine Alone in Patients With Advanced Pancreatic Cancer: A Phase III Trial of the National Cancer Institute of Canada Clinical Trials Group","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":3859,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Gemcitabine; Erlotinib; Medicine; Internal medicine; Pancreatic cancer; Erlotinib Hydrochloride; Oncology; Hazard ratio; Adverse effect; Placebo; Clinical endpoint; Clinical trial; Cancer; Epidermal growth factor receptor; Confidence interval; Pathology","authors":[{"name":"Malcolm J. Moore","is_ca":true},{"name":"David Goldstein","is_ca":true},{"name":"John Hamm","is_ca":true},{"name":"Arié Figer","is_ca":true},{"name":"J. Randolph Hecht","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"H. Au","is_ca":true},{"name":"P. Murawa","is_ca":true},{"name":"David Walde","is_ca":true},{"name":"Robert A. Wolff","is_ca":true},{"name":"Daniel de Castro","is_ca":true},{"name":"Robert Lim","is_ca":true},{"name":"Keyue Ding","is_ca":true},{"name":"Gary M. Clark","is_ca":true},{"name":"Theodora Voskoglou-Nomikos","is_ca":true},{"name":"Mieke Ptasynski","is_ca":true},{"name":"Wendy R. Parulekar","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1918460886647593,"gpt":0.5307549424111981,"spread":0.3389088537464388,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002142933,0.001383767,0.002514711,0.0003634211,0.0004914634,0.001025081,0.0007437323,0.001168112,0.003962142],"category_scores_gemma":[0.001650099,0.0003822498,0.001830694,0.0006228651,0.0008236529,0.0005502077,0.0002907834,0.002722772,0.0004280246],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002074574,"about_ca_system_score_gemma":0.003125771,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01235901,"about_ca_topic_score_gemma":0.03469945,"domain_scores_codex":[0.9993296,0.0004143563,0.00003309946,0.00007912843,0.00006105463,0.00008271658],"domain_scores_gemma":[0.9992016,0.0001756368,0.0002415586,0.00004334639,0.00007440384,0.0002633851],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.963687,0.003850208,0.0007559969,0.0008219967,0.001223996,0.0000275436,0.00004489414,0.0005148456,0.001115337,0.00009094241,0.001902594,0.02596453],"study_design_scores_gemma":[0.9451656,0.04748755,0.004217052,0.00008084467,0.0009051238,0.00004291937,0.00002458792,0.0005818898,0.0002506364,0.00009438945,0.001131741,0.00001765442],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9667326,0.01973854,0.0004343408,0.002313145,0.0006893711,0.004119412,0.001813912,0.0001026756,0.004056045],"genre_scores_gemma":[0.9770571,0.01073498,0.001431223,0.001668544,0.000502573,0.002839301,0.001476339,0.00002058365,0.004269349],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01235901,"threshold_uncertainty_score":0.02457416,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2285093314","doi":"10.1038/nature16965","title":"Genomic analyses identify molecular subtypes of pancreatic cancer","year":2016,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":3726,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Pancreas Centre (Canada)","funders":"Medical Research Council; Pancreatic Cancer UK; Wellcome Trust; Academy of Medical Sciences; National Cancer Institute; Cancer Research UK","keywords":"Biology; PDX1; Pancreatic cancer; Cancer research; KRAS; Wnt signaling pathway; Downregulation and upregulation; Progenitor cell; Cancer; Gene; Stem cell; Transcription factor; Mutation; Genetics","authors":[{"name":"Peter J. Bailey","is_ca":false},{"name":"David K. Chang","is_ca":false},{"name":"Kátia Nones","is_ca":false},{"name":"Amber L. Johns","is_ca":false},{"name":"Ann‐Marie Patch","is_ca":false},{"name":"Marie‐Claude Gingras","is_ca":false},{"name":"David K. Miller","is_ca":false},{"name":"Angelika N. Christ","is_ca":false},{"name":"Timothy J. C. Bruxner","is_ca":false},{"name":"Michael C. Quinn","is_ca":false},{"name":"Craig Nourse","is_ca":false},{"name":"L. Charles Murtaugh","is_ca":false},{"name":"Ivon Harliwong","is_ca":false},{"name":"Senel Idrisoglu","is_ca":false},{"name":"Suzanne Manning","is_ca":false},{"name":"Ehsan Nourbakhsh","is_ca":false},{"name":"Shivangi Wani","is_ca":false},{"name":"J. Lynn Fink","is_ca":false},{"name":"Oliver Holmes","is_ca":false},{"name":"Venessa Chin","is_ca":false},{"name":"Matthew J. Anderson","is_ca":false},{"name":"Stephen H. Kazakoff","is_ca":false},{"name":"Conrad Leonard","is_ca":false},{"name":"Felicity Newell","is_ca":false},{"name":"Nick M. Waddell","is_ca":false},{"name":"Scott Wood","is_ca":false},{"name":"Qinying Xu","is_ca":false},{"name":"Peter J. Wilson","is_ca":false},{"name":"Nicole Cloonan","is_ca":false},{"name":"Karin S. Kassahn","is_ca":false},{"name":"Darrin F. Taylor","is_ca":false},{"name":"Kelly Quek","is_ca":false},{"name":"Alan J. Robertson","is_ca":false},{"name":"Lorena Pantano","is_ca":false},{"name":"Laura Mincarelli","is_ca":false},{"name":"Luis Navarro-Sánchez","is_ca":false},{"name":"Lisa Evers","is_ca":false},{"name":"Jianmin Wu","is_ca":false},{"name":"Mark Pinese","is_ca":false},{"name":"Mark J. Cowley","is_ca":false},{"name":"Marc D. Jones","is_ca":false},{"name":"Emily K. Colvin","is_ca":false},{"name":"Adnan M. Nagrial","is_ca":false},{"name":"Emily S. Humphrey","is_ca":false},{"name":"Lorraine A. Chantrill","is_ca":false},{"name":"Amanda Mawson","is_ca":false},{"name":"Jeremy L. Humphris","is_ca":false},{"name":"Angela Chou","is_ca":false},{"name":"Marina Pajic","is_ca":false},{"name":"Christopher J. Scarlett","is_ca":false},{"name":"Andreia V. Pinho","is_ca":false},{"name":"Marc Giry-Laterrière","is_ca":false},{"name":"Ilse Rooman","is_ca":false},{"name":"Jaswinder S. Samra","is_ca":false},{"name":"James G. Kench","is_ca":false},{"name":"Jessica A. Lovell","is_ca":false},{"name":"Neil D. Merrett","is_ca":false},{"name":"Christopher W. Toon","is_ca":false},{"name":"Krishna Epari","is_ca":false},{"name":"Nam Q. Nguyen","is_ca":false},{"name":"Andrew P. Barbour","is_ca":false},{"name":"Nikolajs Zeps","is_ca":false},{"name":"Kim Moran‐Jones","is_ca":false},{"name":"Nigel B. Jamieson","is_ca":false},{"name":"Janet Graham","is_ca":false},{"name":"Fraser R. Duthie","is_ca":false},{"name":"Karin A. Oien","is_ca":false},{"name":"Jane Hair","is_ca":false},{"name":"Robert Grützmann","is_ca":false},{"name":"Anirban Maitra","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Richard A. Morgan","is_ca":false},{"name":"Rita T. Lawlor","is_ca":false},{"name":"Vincenzo Corbo","is_ca":false},{"name":"Claudio Bassi","is_ca":true},{"name":"Borislav C. Rusev","is_ca":false},{"name":"Paola Capelli","is_ca":false},{"name":"Roberto Salvia","is_ca":true},{"name":"Giampaolo Tortora","is_ca":false},{"name":"Debabrata Mukhopadhyay","is_ca":false},{"name":"Gloria M. Petersen","is_ca":false},{"name":"Donna M. Munzy","is_ca":false},{"name":"William E. Fisher","is_ca":false},{"name":"Saadia A. Karim","is_ca":false},{"name":"James R. Eshleman","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Christian Pilarsky","is_ca":false},{"name":"Jennifer P. Morton","is_ca":false},{"name":"Owen J. Sansom","is_ca":false},{"name":"Aldo Scarpa","is_ca":false},{"name":"Elizabeth A. Musgrove","is_ca":false},{"name":"Ulla‐Maja Bailey","is_ca":false},{"name":"Oliver Hofmann","is_ca":false},{"name":"Robert L. Sutherland","is_ca":false},{"name":"David A. Wheeler","is_ca":false},{"name":"Anthony J. Gill","is_ca":false},{"name":"Richard A. Gibbs","is_ca":false},{"name":"John V. Pearson","is_ca":false},{"name":"Nicola Waddell","is_ca":false},{"name":"Andrew V. Biankin","is_ca":false},{"name":"Sean M. Grimmond","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03526903766333178,"gpt":0.4244510632983102,"spread":0.3891820256349784,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000325727,0.0003089519,0.0003896401,0.001740698,0.0004506061,0.001200843,0.0004144352,0.0004840041,0.003541502],"category_scores_gemma":[0.001239196,0.000227834,0.0005394411,0.001390783,0.0003884775,0.0004573569,0.0006911746,0.0006386769,0.0005526688],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004292832,"about_ca_system_score_gemma":0.000318763,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001512152,"about_ca_topic_score_gemma":0.002723249,"domain_scores_codex":[0.9996226,0.00006197486,0.00003095519,0.0001098832,0.00009169508,0.00008293233],"domain_scores_gemma":[0.9993223,0.0002053497,0.0002640374,0.0000811743,0.00005264787,0.00007453663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001105043,0.00008855185,0.820428,0.0001915626,0.0004535777,0.001317893,0.0003212956,0.001018717,0.09449797,0.002240174,0.002679737,0.07565761],"study_design_scores_gemma":[0.00004794735,0.0001672158,0.9604238,0.00005171278,0.000524288,0.004109572,0.0008798647,0.001820768,0.01498208,0.005583106,0.01139294,0.00001666382],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9808596,0.003763075,0.003096677,0.00153629,0.00005866958,0.00002390486,0.003043334,0.0001325984,0.007485831],"genre_scores_gemma":[0.9945756,0.001150714,0.001451028,0.0002732089,0.00007217778,0.00001110077,0.001617512,0.00003690941,0.0008116315],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003541502,"threshold_uncertainty_score":0.0118475,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2135187257","doi":"10.1056/nejmsa035205","title":"Surgeon Volume and Operative Mortality in the United States","year":2003,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":3100,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute for Clinical Evaluative Sciences","funders":"Agency for Healthcare Research and Quality","keywords":"Medicine; Surgery; Mortality rate; Pneumonectomy; Resection; General surgery; Lung cancer; Internal medicine","authors":[{"name":"John D. Birkmeyer","is_ca":false},{"name":"Thérèse A. Stukel","is_ca":true},{"name":"Andrea E. Siewers","is_ca":false},{"name":"Philip P. Goodney","is_ca":false},{"name":"David E. Wennberg","is_ca":false},{"name":"F. Lee Lucas","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0529103368086932,"gpt":0.3807762527911453,"spread":0.3278659159824521,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000408562,0.0001283734,0.0001151882,0.0008477451,0.0001342251,0.0003773484,0.000190052,0.0001516709,0.001428897],"category_scores_gemma":[0.00295108,0.000108757,0.0002128738,0.0007582476,0.0001950637,0.0002179528,0.0003838522,0.0002322635,0.0001538244],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004238488,"about_ca_system_score_gemma":0.0003688917,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008972157,"about_ca_topic_score_gemma":0.009492382,"domain_scores_codex":[0.9996984,0.00009258447,0.00003398384,0.00004677892,0.00008658352,0.00004161691],"domain_scores_gemma":[0.9959038,0.0008817165,0.002420557,0.00007129107,0.0003285785,0.0003940119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002577534,0.000008527563,0.9983944,0.000006604998,0.00002501285,0.00002283396,0.00002091335,0.0001599172,0.00002238027,0.00002264752,0.0003696214,0.0009211697],"study_design_scores_gemma":[0.00000564548,0.00002482796,0.9988663,0.000009462717,0.00001213435,0.0001277578,0.00005285864,0.0004608331,0.00003473656,0.00006004286,0.0003423732,0.000003025259],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968712,0.0006558963,0.0001228351,0.000339874,0.00001558237,0.000003140216,0.001156396,0.00001364658,0.0008213533],"genre_scores_gemma":[0.9985631,0.0002105088,0.00006578543,0.00004861073,0.00002163914,0.000003840399,0.0009779892,0.000002149581,0.0001063876],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008972157,"threshold_uncertainty_score":0.01783991,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1987313243","doi":"10.1038/nature14169","title":"Whole genomes redefine the mutational landscape of pancreatic cancer","year":2015,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":2673,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Pancreas Centre (Canada)","funders":"National Cancer Institute; Medical Research Council; Queensland Government; National Institutes of Health; Royal Australasian College of Physicians; Gastroenterological Society of Australia; Cancer Institute NSW; Università degli Studi di Verona; University of Glasgow; Cancer Council NSW; National Health and Medical Research Council; Academy of Medical Sciences; Cancer Research UK; Australian Cancer Research Foundation; Australian Government; Petre Foundation; Wellcome Trust; Royal College of Pathologists of Australasia; Johns Hopkins University; R.T. Hall Trust; American Association for Cancer Research","keywords":"CDKN2A; Pancreatic cancer; Biology; Genome instability; Carcinogenesis; Genome; Copy-number variation; Cancer research; Copy number analysis; Cancer; Genetics; ARID1A; Gene; PALB2; Mutation; DNA damage; Germline mutation; DNA","authors":[{"name":"Nicola Waddell","is_ca":false},{"name":"Marina Pajic","is_ca":false},{"name":"Ann‐Marie Patch","is_ca":false},{"name":"David K. Chang","is_ca":false},{"name":"Karin S. Kassahn","is_ca":false},{"name":"Peter J. Bailey","is_ca":false},{"name":"Amber L. Johns","is_ca":false},{"name":"David S. Miller","is_ca":false},{"name":"Kátia Nones","is_ca":false},{"name":"Kelly Quek","is_ca":false},{"name":"Michael C. Quinn","is_ca":false},{"name":"Alan J. Robertson","is_ca":false},{"name":"Muhammad Zaki Hidayatullah Fadlullah","is_ca":false},{"name":"Timothy J. C. Bruxner","is_ca":false},{"name":"Angelika N. Christ","is_ca":false},{"name":"Ivon Harliwong","is_ca":false},{"name":"Senel Idrisoglu","is_ca":false},{"name":"Suzanne Manning","is_ca":false},{"name":"Craig Nourse","is_ca":false},{"name":"Ehsan Nourbakhsh","is_ca":false},{"name":"Shivangi Wani","is_ca":false},{"name":"Peter J. Wilson","is_ca":false},{"name":"Emma Markham","is_ca":false},{"name":"Nicole Cloonan","is_ca":false},{"name":"Matthew J. Anderson","is_ca":false},{"name":"J. Lynn Fink","is_ca":false},{"name":"Oliver Holmes","is_ca":false},{"name":"Stephen H. Kazakoff","is_ca":false},{"name":"Conrad Leonard","is_ca":false},{"name":"Felicity Newell","is_ca":false},{"name":"Barsha Poudel","is_ca":false},{"name":"Sarah Song","is_ca":false},{"name":"Darrin F. Taylor","is_ca":false},{"name":"Nick M. Waddell","is_ca":false},{"name":"Scott Wood","is_ca":false},{"name":"Qinying Xu","is_ca":false},{"name":"Jianmin Wu","is_ca":false},{"name":"Mark Pinese","is_ca":false},{"name":"Mark J. Cowley","is_ca":false},{"name":"Hong C. Lee","is_ca":false},{"name":"Marc D. Jones","is_ca":false},{"name":"Adnan Nagrial","is_ca":false},{"name":"Jeremy L. Humphris","is_ca":false},{"name":"Lorraine A. Chantrill","is_ca":false},{"name":"Venessa Chin","is_ca":false},{"name":"Angela Steinmann","is_ca":false},{"name":"Amanda Mawson","is_ca":false},{"name":"Emily S. Humphrey","is_ca":false},{"name":"Emily K. Colvin","is_ca":false},{"name":"Angela Chou","is_ca":false},{"name":"Christopher J. Scarlett","is_ca":false},{"name":"Andreia V. Pinho","is_ca":false},{"name":"Marc Giry-Laterrière","is_ca":false},{"name":"Ilse Rooman","is_ca":false},{"name":"Jaswinder S. Samra","is_ca":false},{"name":"James G. Kench","is_ca":false},{"name":"Jessica A. Pettitt","is_ca":false},{"name":"Neil D. Merrett","is_ca":false},{"name":"Christopher W. Toon","is_ca":false},{"name":"Krishna Epari","is_ca":false},{"name":"Nam Q. Nguyen","is_ca":false},{"name":"Andrew P. Barbour","is_ca":false},{"name":"Nikolajs Zeps","is_ca":false},{"name":"Nigel B. Jamieson","is_ca":false},{"name":"Janet Graham","is_ca":false},{"name":"Simone P. Niclou","is_ca":false},{"name":"Rolf Bjerkvig","is_ca":false},{"name":"Robert Grützmann","is_ca":false},{"name":"Daniela E. Aust","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Anirban Maitra","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Richard A. Morgan","is_ca":false},{"name":"Rita T. Lawlor","is_ca":false},{"name":"Vincenzo Corbo","is_ca":false},{"name":"Claudio Bassi","is_ca":true},{"name":"Massimo Falconi","is_ca":false},{"name":"Giuseppe Zamboni","is_ca":false},{"name":"Giampaolo Tortora","is_ca":false},{"name":"Margaret A. Tempero","is_ca":false},{"name":"Anthony J. Gill","is_ca":false},{"name":"James R. Eshleman","is_ca":false},{"name":"Christian Pilarsky","is_ca":false},{"name":"Aldo Scarpa","is_ca":false},{"name":"Elizabeth A. Musgrove","is_ca":false},{"name":"John V. Pearson","is_ca":false},{"name":"Andrew V. Biankin","is_ca":false},{"name":"Sean M. Grimmond","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03322413154354563,"gpt":0.3625845020212103,"spread":0.3293603704776647,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006001676,0.000305811,0.0003467448,0.0008259636,0.000317935,0.001243679,0.000374937,0.0008875461,0.003550285],"category_scores_gemma":[0.002409981,0.0002403533,0.0003553622,0.001032393,0.0004026533,0.0008318888,0.0006549731,0.001304284,0.0004548242],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004755532,"about_ca_system_score_gemma":0.0004878504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001443421,"about_ca_topic_score_gemma":0.003366254,"domain_scores_codex":[0.9996903,0.00008815018,0.00001663746,0.00008650294,0.00007633362,0.00004200398],"domain_scores_gemma":[0.9994146,0.0002690268,0.0001089233,0.00009184209,0.00006459428,0.00005106973],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.001281463,0.0001456251,0.0690045,0.001170131,0.001047405,0.001120232,0.001072679,0.01517372,0.3424222,0.02486137,0.02428344,0.5184172],"study_design_scores_gemma":[0.000189552,0.0006338868,0.3471599,0.00091385,0.001424117,0.005711083,0.001814138,0.02047266,0.1166286,0.09043865,0.4144237,0.0001898397],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8809338,0.03505911,0.02703063,0.02160664,0.0008755105,0.00004772796,0.01280749,0.00121413,0.02042495],"genre_scores_gemma":[0.9581117,0.01397178,0.01432969,0.004331362,0.000318664,0.00003334321,0.003833168,0.0005253968,0.004544964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003550285,"threshold_uncertainty_score":0.01187688,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2917919815","doi":"10.14740/wjon1166","title":"Epidemiology of Pancreatic Cancer: Global Trends, Etiology and Risk Factors","year":2019,"lang":"en","type":"review","venue":"World Journal of Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":2292,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"","keywords":"Medicine; Pancreatic cancer; Etiology; Disease; Cancer; Pancreatitis; Population; Mortality rate; Epidemiology; Family history; Diabetes mellitus; Internal medicine; Environmental health","authors":[{"name":"Prashanth Rawla","is_ca":false},{"name":"Tagore Sunkara","is_ca":false},{"name":"Vinaya Gaduputi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.170586051001457,"gpt":0.4960486307512174,"spread":0.3254625797497603,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009988325,0.0004847978,0.0007090022,0.003438197,0.0003666432,0.001386798,0.0004619111,0.0005140246,0.003224893],"category_scores_gemma":[0.002991677,0.0002541455,0.0009407524,0.009195075,0.0004492413,0.001373313,0.0009929124,0.001557974,0.001069693],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001116258,"about_ca_system_score_gemma":0.001548269,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0140625,"about_ca_topic_score_gemma":0.00956476,"domain_scores_codex":[0.999025,0.0001980565,0.0001596157,0.0002315892,0.0002749175,0.0001109633],"domain_scores_gemma":[0.9980701,0.0002617592,0.0007635048,0.00007118898,0.0006349066,0.0001986823],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002062344,0.00007466706,0.7173572,0.004932065,0.0007773063,0.0003111988,0.0006761352,0.0008160353,0.0004228399,0.003359448,0.06821183,0.202855],"study_design_scores_gemma":[0.0000181651,0.0001262728,0.8510357,0.003547326,0.0004254685,0.002333321,0.001467797,0.0007775234,0.0001472057,0.002552637,0.1375049,0.00006366981],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.146537,0.7474601,0.004645801,0.02070561,0.001414937,0.0002922914,0.05569557,0.0005398948,0.02270887],"genre_scores_gemma":[0.3993385,0.5508412,0.004634219,0.003018014,0.001945792,0.0003037359,0.03650068,0.0001247814,0.003293031],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.0140625,"threshold_uncertainty_score":0.02796125,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2161884651","doi":"10.1038/nature11547","title":"Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes","year":2012,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":2113,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Sinai Hospital; University Health Network; Ontario Institute for Cancer Research","funders":"Università degli Studi di Verona; Gastroenterological Society of Australia; Associazione Italiana per la Ricerca sul Cancro; Queensland Government; Agency for Science, Technology and Research; National Institutes of Health; Cancer Council NSW; Royal Australasian College of Physicians; Cancer Institute NSW; National Health and Medical Research Council; Wellcome Trust; Cancer Research UK; National Cancer Institute; Australian Cancer Research Foundation; Australian Government; National Human Genome Research Institute; Johns Hopkins University; Petre Foundation; Royal College of Pathologists of Australasia; Medical Research Council; Ministero dello Sviluppo Economico; Cancer Prevention and Research Institute of Texas; R.T. Hall Trust; American Association for Cancer Research","keywords":"Biology; KRAS; Exome sequencing; Genetics; Pancreatic cancer; CDKN2A; Carcinogenesis; Exome; Cancer research; Gene; Cancer; Mutation","authors":[{"name":"Andrew V. Biankin","is_ca":false},{"name":"Nicola Waddell","is_ca":false},{"name":"Karin S. Kassahn","is_ca":false},{"name":"Marie‐Claude Gingras","is_ca":true},{"name":"Lakshmi Muthuswamy","is_ca":true},{"name":"Amber L. Johns","is_ca":false},{"name":"David K. Miller","is_ca":false},{"name":"Peter J. Wilson","is_ca":false},{"name":"Ann‐Marie Patch","is_ca":false},{"name":"Jianmin Wu","is_ca":false},{"name":"David K. Chang","is_ca":false},{"name":"Mark J. Cowley","is_ca":false},{"name":"Brooke Gardiner","is_ca":false},{"name":"Sarah Song","is_ca":false},{"name":"Ivon Harliwong","is_ca":false},{"name":"Senel Idrisoglu","is_ca":false},{"name":"Craig Nourse","is_ca":false},{"name":"Ehsan Nourbakhsh","is_ca":false},{"name":"Suzanne Manning","is_ca":false},{"name":"Shivangi Wani","is_ca":false},{"name":"Milena Gongora","is_ca":false},{"name":"Marina Pajic","is_ca":false},{"name":"Christopher J. Scarlett","is_ca":false},{"name":"Anthony J. Gill","is_ca":false},{"name":"Andreia V. Pinho","is_ca":false},{"name":"Ilse Rooman","is_ca":false},{"name":"Matthew J. Anderson","is_ca":false},{"name":"Oliver Holmes","is_ca":false},{"name":"Conrad Leonard","is_ca":false},{"name":"Darrin F. Taylor","is_ca":false},{"name":"Scott Wood","is_ca":false},{"name":"Qinying Xu","is_ca":false},{"name":"Kátia Nones","is_ca":false},{"name":"J. Lynn Fink","is_ca":false},{"name":"Angelika N. Christ","is_ca":false},{"name":"Timothy J. C. Bruxner","is_ca":false},{"name":"Nicole Cloonan","is_ca":false},{"name":"Gabriel Kolle","is_ca":false},{"name":"Felicity Newell","is_ca":false},{"name":"Mark Pinese","is_ca":false},{"name":"R. Scott Mead","is_ca":false},{"name":"Jeremy L. Humphris","is_ca":false},{"name":"Warren Kaplan","is_ca":false},{"name":"Marc D. Jones","is_ca":false},{"name":"Emily K. Colvin","is_ca":false},{"name":"Adnan Nagrial","is_ca":false},{"name":"Emily S. Humphrey","is_ca":false},{"name":"Angela Chou","is_ca":false},{"name":"Venessa Chin","is_ca":false},{"name":"Lorraine A. Chantrill","is_ca":false},{"name":"Amanda Mawson","is_ca":false},{"name":"Jaswinder S. Samra","is_ca":false},{"name":"James G. Kench","is_ca":false},{"name":"Jessica A. Lovell","is_ca":false},{"name":"Roger J. Daly","is_ca":false},{"name":"Neil D. Merrett","is_ca":false},{"name":"Christopher W. Toon","is_ca":false},{"name":"Krishna Epari","is_ca":false},{"name":"Nam Q. Nguyen","is_ca":false},{"name":"Andrew P. Barbour","is_ca":false},{"name":"Nikolajs Zeps","is_ca":false},{"name":"Nipun Kakkar","is_ca":false},{"name":"Fengmei Zhao","is_ca":false},{"name":"Yuan Wu","is_ca":false},{"name":"Min Wang","is_ca":false},{"name":"Donna M. Muzny","is_ca":false},{"name":"William E. Fisher","is_ca":false},{"name":"F. Charles Brunicardi","is_ca":false},{"name":"Sally E. Hodges","is_ca":false},{"name":"Jeffrey G. Reid","is_ca":false},{"name":"Jennifer Drummond","is_ca":false},{"name":"Kyle Chang","is_ca":false},{"name":"Yi Han","is_ca":false},{"name":"Lora Lewis","is_ca":false},{"name":"Huyen Dinh","is_ca":false},{"name":"Christian Buhay","is_ca":true},{"name":"Timothy A. Beck","is_ca":true},{"name":"Lee E. Timms","is_ca":true},{"name":"Michelle Sam","is_ca":true},{"name":"Kimberly Begley","is_ca":true},{"name":"Andrew Brown","is_ca":true},{"name":"Deepa Pai","is_ca":true},{"name":"Ami Panchal","is_ca":true},{"name":"Nicholas Buchner","is_ca":true},{"name":"Richard de Borja","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Christina K. Yung","is_ca":true},{"name":"Stefano Serra","is_ca":true},{"name":"Nicole Onetto","is_ca":true},{"name":"Debabrata Mukhopadhyay","is_ca":true},{"name":"Ming‐Sound Tsao","is_ca":true},{"name":"Patricia A. Shaw","is_ca":true},{"name":"Gloria M. Petersen","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Anirban Maitra","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Richard D. Schulick","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Richard A. Morgan","is_ca":false},{"name":"Rita T. Lawlor","is_ca":false},{"name":"Paola Capelli","is_ca":false},{"name":"Vincenzo Corbo","is_ca":false},{"name":"Maria Scardoni","is_ca":false},{"name":"Giampaolo Tortora","is_ca":false},{"name":"Margaret A. Tempero","is_ca":false},{"name":"Karen M. Mann","is_ca":false},{"name":"Nancy A. Jenkins","is_ca":false},{"name":"Pedro A. Pérez–Mancera","is_ca":false},{"name":"David J. Adams","is_ca":false},{"name":"David A. Largaespada","is_ca":false},{"name":"Lodewyk F.A. Wessels","is_ca":false},{"name":"Alistair G. Rust","is_ca":true},{"name":"Lincoln Stein","is_ca":true},{"name":"David A. Tuveson","is_ca":false},{"name":"Neal G. Copeland","is_ca":false},{"name":"Elizabeth A. Musgrove","is_ca":false},{"name":"Aldo Scarpa","is_ca":false},{"name":"James R. Eshleman","is_ca":true},{"name":"Thomas J. Hudson","is_ca":true},{"name":"Robert L. Sutherland","is_ca":false},{"name":"David A. Wheeler","is_ca":false},{"name":"John V. Pearson","is_ca":true},{"name":"John D. McPherson","is_ca":true},{"name":"Richard A. Gibbs","is_ca":false},{"name":"Sean M. Grimmond","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03125184745655787,"gpt":0.3649423524171552,"spread":0.3336905049605974,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001924723,0.000406881,0.000377124,0.001013194,0.000545614,0.0007946763,0.0002675415,0.00079094,0.004067255],"category_scores_gemma":[0.000979864,0.000239601,0.0005280063,0.001762631,0.0003276705,0.0002311917,0.000704728,0.0007204157,0.0003693617],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003302355,"about_ca_system_score_gemma":0.0003518786,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002913394,"about_ca_topic_score_gemma":0.005488738,"domain_scores_codex":[0.9996327,0.00002867791,0.00003077536,0.000131736,0.0001100905,0.00006605138],"domain_scores_gemma":[0.9993528,0.0002177985,0.0002604309,0.00005091514,0.00003797907,0.00008007701],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.003955048,0.0001089598,0.3675481,0.0004919703,0.001551553,0.006403592,0.0006588594,0.00397911,0.5322894,0.00222638,0.004255639,0.07653136],"study_design_scores_gemma":[0.0001174422,0.0002493589,0.9257966,0.00007920766,0.001637363,0.009727659,0.0006064366,0.002399238,0.0354767,0.002244568,0.02161284,0.00005255231],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9852078,0.001510291,0.001400634,0.0006335949,0.0000404365,0.00001634872,0.007931049,0.0001279638,0.003131942],"genre_scores_gemma":[0.991795,0.0009260533,0.001385742,0.0004158758,0.00002312801,0.00001431474,0.003965757,0.00008443366,0.001389687],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004067255,"threshold_uncertainty_score":0.01360631,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2157590016","doi":"10.1001/jama.2010.1275","title":"Adjuvant Chemotherapy With Fluorouracil Plus Folinic Acid vs Gemcitabine Following Pancreatic Cancer Resection","year":2010,"lang":"en","type":"article","venue":"JAMA","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1387,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre","funders":"National Institute for Health and Care Research; Cancer Research UK","keywords":"Medicine; Folinic acid; Gemcitabine; Pancreatic cancer; Fluorouracil; Antimetabolite; Internal medicine; Pancreatic disease; Interquartile range; Surgery; Gastroenterology; Chemotherapy; Cancer; Oncology; Pancreas","authors":[{"name":"John P. Neoptolemos","is_ca":false},{"name":"Deborah Stocken","is_ca":false},{"name":"Claudio Bassi","is_ca":false},{"name":"Paula Ghaneh","is_ca":false},{"name":"David Cunningham","is_ca":false},{"name":"David Goldstein","is_ca":false},{"name":"Robert Padbury","is_ca":false},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"C. Mariette","is_ca":false},{"name":"Moritz N. Wente","is_ca":false},{"name":"Jakob R. Izbicki","is_ca":false},{"name":"Helmut Friess","is_ca":false},{"name":"Markus M. Lerch","is_ca":false},{"name":"Christos Dervenis","is_ca":false},{"name":"Attila Oláh","is_ca":false},{"name":"Giovanni Butturini","is_ca":false},{"name":"Ryuichiro Doi","is_ca":false},{"name":"Pehr Lind","is_ca":false},{"name":"David B. Smith","is_ca":false},{"name":"Juan W. Valle","is_ca":false},{"name":"Daniel H. Palmer","is_ca":false},{"name":"John Buckels","is_ca":false},{"name":"Joyce Thompson","is_ca":false},{"name":"Colin J. McKay","is_ca":false},{"name":"Charlotte Rawcliffe","is_ca":false},{"name":"Markus W. Büchler","is_ca":false},{"name":"for the European Study Group for Pancreatic Cancer","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02258065455326055,"gpt":0.3399795159423628,"spread":0.3173988613891023,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001680511,0.0004653013,0.00199041,0.0003201581,0.000237972,0.0005648015,0.0004143057,0.0009438567,0.001869557],"category_scores_gemma":[0.002326784,0.0001717645,0.0009870153,0.0004730702,0.0005610317,0.0005740654,0.0003792038,0.001214521,0.0001672418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006861894,"about_ca_system_score_gemma":0.001092955,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005227141,"about_ca_topic_score_gemma":0.001555261,"domain_scores_codex":[0.9992558,0.0004681147,0.00006876526,0.00007654387,0.00004738199,0.0000833525],"domain_scores_gemma":[0.9985924,0.0006412673,0.0003995405,0.00005133889,0.00003946423,0.0002759279],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.9366916,0.005395821,0.003727745,0.0008943254,0.0007984323,0.00008585527,0.00005094335,0.001341136,0.003000036,0.00009580826,0.0003420995,0.04757623],"study_design_scores_gemma":[0.3902118,0.5733429,0.02355713,0.0003242269,0.002707877,0.0003512164,0.00009189565,0.002763778,0.003811833,0.0004261082,0.002377971,0.0000332204],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9909402,0.00708224,0.0002414205,0.0002301971,0.0001674708,0.0005052109,0.0001114528,0.00001659451,0.0007051958],"genre_scores_gemma":[0.995737,0.002509433,0.0004028331,0.0002188396,0.0001909297,0.0004878585,0.0001821492,0.000003437656,0.0002676382],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00199041,"threshold_uncertainty_score":0.00888747,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2066254965","doi":"10.1038/nature09460","title":"The patterns and dynamics of genomic instability in metastatic pancreatic cancer","year":2010,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1324,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Cancer Research","funders":"National Cancer Institute; Wellcome Trust; National Institutes of Health; Uehara Memorial Foundation; Skip Viragh Foundation","keywords":"Pancreatic cancer; Genome instability; Metastasis; Cancer; Somatic evolution in cancer; Exome sequencing; Biology; Carcinogenesis; Exome; Evolutionary dynamics; Genetic heterogeneity; Genome; Cancer research; Oncology; Medicine; Genetics; Mutation; Gene; DNA; Phenotype; Population","authors":[{"name":"Peter J. Campbell","is_ca":false},{"name":"Shinichi Yachida","is_ca":false},{"name":"Laura Mudie","is_ca":false},{"name":"Philip J. Stephens","is_ca":false},{"name":"Erin Pleasance","is_ca":false},{"name":"Lucy Stebbings","is_ca":false},{"name":"Laura Morsberger","is_ca":false},{"name":"Calli Latimer","is_ca":false},{"name":"Stuart McLaren","is_ca":false},{"name":"Meng-Lay Lin","is_ca":false},{"name":"David J. McBride","is_ca":false},{"name":"Ignacio Varela","is_ca":false},{"name":"Serena Nik‐Zainal","is_ca":false},{"name":"Catherine Leroy","is_ca":false},{"name":"Mingming Jia","is_ca":false},{"name":"Andrew Menzies","is_ca":false},{"name":"Adam P. Butler","is_ca":false},{"name":"Jon W. Teague","is_ca":false},{"name":"Constance A. Griffin","is_ca":false},{"name":"John H. Burton","is_ca":false},{"name":"Harold Swerdlow","is_ca":false},{"name":"Michael A. Quail","is_ca":false},{"name":"Michael R. Stratton","is_ca":true},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"P. Andrew Futreal","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01452769535676719,"gpt":0.3488258455886692,"spread":0.3342981502319021,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003031083,0.00007606576,0.0002071323,0.001794577,0.0002571638,0.0007268182,0.0002353282,0.0002365807,0.002262862],"category_scores_gemma":[0.001831269,0.0001559318,0.0001240973,0.001174152,0.0002694067,0.0006272021,0.0003290924,0.0003088029,0.0003331161],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000287851,"about_ca_system_score_gemma":0.000154942,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00129715,"about_ca_topic_score_gemma":0.00179659,"domain_scores_codex":[0.9998028,0.00003576375,0.00001993968,0.00004568498,0.00005581125,0.00004010724],"domain_scores_gemma":[0.9992732,0.0002162173,0.0002489486,0.00005921547,0.0001293794,0.0000729468],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002592887,0.00006573289,0.7200878,0.0001284555,0.0001743677,0.0006666594,0.0007723535,0.001670241,0.2004624,0.001970797,0.001064529,0.07034383],"study_design_scores_gemma":[0.000008859531,0.0001432371,0.9839261,0.000009983531,0.00003131671,0.001567078,0.0004676871,0.001335215,0.009093729,0.001051555,0.002354297,0.00001109323],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943942,0.00220598,0.0006870689,0.0001485713,0.000005093713,0.000006536017,0.000501945,0.000027842,0.002022777],"genre_scores_gemma":[0.9984054,0.0006078364,0.0001696292,0.00001872948,0.00001334526,0.000006853779,0.0001908808,0.000007589163,0.0005796902],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002262862,"threshold_uncertainty_score":0.007570028,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2016448153","doi":"10.1053/j.gastro.2015.01.015","title":"American Gastroenterological Association Institute Guideline on the Diagnosis and Management of Asymptomatic Neoplastic Pancreatic Cysts","year":2015,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1114,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Hamilton Health Sciences","funders":"U.S. Department of Veterans Affairs; Feinberg School of Medicine; School of Medicine, Vanderbilt University; Johns Hopkins University; University of Minnesota; Medical School, University of Michigan; Northwestern University; University of Pennsylvania; Yale University; Vanderbilt University; University of North Carolina at Chapel Hill; Perelman School of Medicine, University of Pennsylvania","keywords":"Medicine; Guideline; Asymptomatic; Malignancy; Cyst; Pancreatic cancer; General surgery; Pancreatic cyst; Dysplasia; Adenocarcinoma; Radiology; Cancer; Surgery; Internal medicine; Pathology","authors":[{"name":"Santhi Swaroop Vege","is_ca":false},{"name":"Barry Ziring","is_ca":false},{"name":"Rajeev Jain","is_ca":false},{"name":"Paul Moayyedi","is_ca":true},{"name":"Megan A. Adams","is_ca":true},{"name":"Spencer D. Dorn","is_ca":false},{"name":"Sharon Dudley‐Brown","is_ca":false},{"name":"Steven L. Flamm","is_ca":false},{"name":"Ziad F. Gellad","is_ca":false},{"name":"Claudia Gruss","is_ca":false},{"name":"Lawrence R. Kosinski","is_ca":false},{"name":"Joseph K. Lim","is_ca":false},{"name":"Yvonne Romero","is_ca":false},{"name":"Joel H. Rubenstein","is_ca":false},{"name":"Walter E. Smalley","is_ca":false},{"name":"Shahnaz Sultan","is_ca":false},{"name":"David S. Weinberg","is_ca":false},{"name":"Yu‐Xiao Yang","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04465345452149518,"gpt":0.3300986184087442,"spread":0.2854451638872491,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002768079,0.001156321,0.001828177,0.004124444,0.0009245035,0.001788655,0.002853945,0.004925102,0.002756019],"category_scores_gemma":[0.01131679,0.0007211902,0.002459425,0.002192652,0.001217548,0.001420572,0.001432087,0.00559049,0.002805135],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002316491,"about_ca_system_score_gemma":0.007546527,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02021441,"about_ca_topic_score_gemma":0.04592803,"domain_scores_codex":[0.9961005,0.0009957162,0.0008041592,0.0001628537,0.00166893,0.000267777],"domain_scores_gemma":[0.9903205,0.00234266,0.001288241,0.0001745756,0.004941605,0.0009324867],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001105762,0.0001777078,0.007366783,0.001621175,0.0001202429,0.002927737,0.0002066321,0.0009873534,0.001440752,0.002483745,0.761573,0.2209843],"study_design_scores_gemma":[0.0002782168,0.0001814016,0.04074116,0.02032362,0.0004752737,0.02217362,0.0005125506,0.001775272,0.001565417,0.007069157,0.9047684,0.0001358889],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"review","genre_gemma":"methods","genre_scores_codex":[0.01661696,0.361483,0.03855507,0.3181842,0.02494554,0.002244566,0.009183427,0.002049003,0.2267382],"genre_scores_gemma":[0.1120314,0.4199599,0.2001475,0.1379797,0.02603949,0.002568474,0.03493159,0.0007152531,0.06562681],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.02021441,"threshold_uncertainty_score":0.0401935,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1964064067","doi":"10.1097/00000478-200105000-00003","title":"Pancreatic Intraepithelial Neoplasia","year":2001,"lang":"en","type":"article","venue":"The American Journal of Surgical Pathology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1112,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"National Cancer Institute","keywords":"Medicine; Pancreatic Intraepithelial Neoplasia; Dysplasia; Medical diagnosis; Grading (engineering); Surgical pathology; Pathology; Intraepithelial neoplasia; Pancreatic duct; Pancreas; Cohen's kappa; Radiology; Carcinoma in situ; Cytopathology; Kappa; Carcinoma; Pancreatic cancer; Internal medicine; Cancer; Cytology","authors":[{"name":"Ralph H. Hruban","is_ca":false},{"name":"Volkan Adsay","is_ca":false},{"name":"Jorge Albores‐Saavedra","is_ca":false},{"name":"Carolyn C. Compton","is_ca":false},{"name":"Elizabeth S. Garrett","is_ca":false},{"name":"Steven N. Goodman","is_ca":false},{"name":"Scott E. Kern","is_ca":false},{"name":"David S. Klimstra","is_ca":false},{"name":"Günter Klöppel","is_ca":false},{"name":"Daniel S. Longnecker","is_ca":false},{"name":"Jütta Lüttges","is_ca":false},{"name":"G.J.A. Offerhaus","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02201122236157785,"gpt":0.3327266718055854,"spread":0.3107154494440075,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007181903,0.0006171757,0.0005638513,0.005150805,0.0006291656,0.001630503,0.0004382078,0.0004981254,0.01282004],"category_scores_gemma":[0.001713221,0.0001468642,0.0005205513,0.005176453,0.0004888771,0.0008692002,0.0009731529,0.0007428635,0.007041113],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005625137,"about_ca_system_score_gemma":0.0007776698,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001309592,"about_ca_topic_score_gemma":0.001781185,"domain_scores_codex":[0.9992368,0.0001418142,0.0001430561,0.0001220206,0.0002757187,0.00008050691],"domain_scores_gemma":[0.9992898,0.0001179749,0.000181368,0.00006626693,0.0002825366,0.00006194678],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0002398792,0.00006108964,0.05487665,0.004868074,0.0002345274,0.006772452,0.0006872978,0.0002340557,0.003271851,0.005173342,0.09577871,0.827802],"study_design_scores_gemma":[0.00001847453,0.00005715639,0.04953731,0.002531932,0.0001794462,0.02877898,0.0005096394,0.0001309921,0.001557655,0.002386769,0.9142893,0.00002233483],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.05718048,0.5025478,0.008050117,0.003752866,0.005151443,0.000479024,0.01500616,0.001034675,0.4067975],"genre_scores_gemma":[0.3453572,0.4569135,0.0208447,0.004099555,0.002887766,0.000504825,0.03242973,0.0002369968,0.1367259],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01282004,"threshold_uncertainty_score":0.04288727,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2807088563","doi":"10.1158/2159-8290.cd-18-0349","title":"Organoid Profiling Identifies Common Responders to Chemotherapy in Pancreatic Cancer","year":2018,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1094,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University Health Network; Princess Margaret Cancer Centre; University of Toronto; Ontario Institute for Cancer Research","funders":"National Center for Advancing Translational Sciences; National Cancer Institute; National Institutes of Health; Lustgarten Foundation","keywords":"Pancreatic cancer; Medicine; Precision medicine; Malignancy; Oncology; Chemotherapy; Cancer; Transcriptome; Gene expression profiling; Internal medicine; Bioinformatics; Cancer research; Biology; Pathology; Gene; Gene expression","authors":[{"name":"Hervé Tiriac","is_ca":false},{"name":"Pascal Belleau","is_ca":false},{"name":"Dannielle D. Engle","is_ca":false},{"name":"Dennis Plenker","is_ca":false},{"name":"Astrid Deschênes","is_ca":false},{"name":"Tim D.D. Somerville","is_ca":false},{"name":"Fieke E. M. Froeling","is_ca":false},{"name":"Richard A. Burkhart","is_ca":false},{"name":"Robert E. Denroche","is_ca":true},{"name":"Gun-Ho Jang","is_ca":true},{"name":"Koji Miyabayashi","is_ca":false},{"name":"C. Megan Young","is_ca":false},{"name":"Hardik J. Patel","is_ca":false},{"name":"Michelle Ma","is_ca":false},{"name":"Joseph F. LaComb","is_ca":false},{"name":"Randze Lerie D. Palmaira","is_ca":false},{"name":"Ammar A. Javed","is_ca":false},{"name":"Jasmine C. Huynh","is_ca":false},{"name":"Molly Johnson","is_ca":false},{"name":"Kanika Arora","is_ca":false},{"name":"Nicolas Robine","is_ca":false},{"name":"Minita Shah","is_ca":false},{"name":"Rashesh Sanghvi","is_ca":false},{"name":"Austin Goetz","is_ca":false},{"name":"Cinthya Y. Lowder","is_ca":false},{"name":"Laura Martello","is_ca":false},{"name":"Else Driehuis","is_ca":false},{"name":"Nicolas Lecomte","is_ca":false},{"name":"Gökçe Aşkan","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Hans Clevers","is_ca":false},{"name":"Laura D. Wood","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Elizabeth D. Thompson","is_ca":false},{"name":"Andrew J. Aguirre","is_ca":false},{"name":"Brian M. Wolpin","is_ca":false},{"name":"Aaron R. Sasson","is_ca":false},{"name":"Joseph Kim","is_ca":false},{"name":"Maoxin Wu","is_ca":false},{"name":"Juan Carlos Bucobo","is_ca":false},{"name":"Peter J. Allen","is_ca":false},{"name":"Divyesh V. Sejpal","is_ca":false},{"name":"William H. Nealon","is_ca":false},{"name":"J. D. Sullivan","is_ca":false},{"name":"Jordan M. Winter","is_ca":false},{"name":"Phyllis A. Gimotty","is_ca":false},{"name":"Jean L. Grem","is_ca":false},{"name":"Dominick J. DiMaio","is_ca":false},{"name":"Jonathan M. Buscaglia","is_ca":false},{"name":"Paul M. Grandgenett","is_ca":false},{"name":"Jonathan R. Brody","is_ca":false},{"name":"Michael A. Hollingsworth","is_ca":false},{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Faiyaz Notta","is_ca":true},{"name":"Edward Kim","is_ca":false},{"name":"James M. Crawford","is_ca":false},{"name":"Craig Devoe","is_ca":false},{"name":"Allyson J. Ocean","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Kenneth H. Yu","is_ca":false},{"name":"Ellen Li","is_ca":false},{"name":"Christopher R. Vakoc","is_ca":false},{"name":"Benjamin Hubert","is_ca":false},{"name":"Sandra E. Fischer","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Richard A. Moffitt","is_ca":false},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Alexander Krasnitz","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"David A. Tuveson","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03869818411819338,"gpt":0.3906178003824897,"spread":0.3519196162642963,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003144769,0.0001876881,0.0004216776,0.000611683,0.0002168786,0.001018381,0.0001777962,0.0003600732,0.001394446],"category_scores_gemma":[0.0005846488,0.0001429181,0.0002535385,0.0007579976,0.0002938697,0.0002327301,0.0004837176,0.0007283093,0.0004756616],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005329684,"about_ca_system_score_gemma":0.0002694514,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005260053,"about_ca_topic_score_gemma":0.001177045,"domain_scores_codex":[0.999744,0.00004126823,0.0000142681,0.00008623345,0.00008297262,0.00003123184],"domain_scores_gemma":[0.9996767,0.00008453397,0.00008754871,0.00003654473,0.00007217539,0.00004247896],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001944622,0.0001098086,0.1132729,0.0003886434,0.0001173595,0.0005016614,0.0003133511,0.001959766,0.7499437,0.0008015236,0.008914051,0.1217326],"study_design_scores_gemma":[0.0001202158,0.001820389,0.5043321,0.0001982115,0.0003998376,0.003896671,0.001338644,0.01101403,0.3778327,0.003944642,0.09497899,0.0001235735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9606889,0.01208124,0.01041284,0.002770866,0.0002462254,0.0001365017,0.006596033,0.0004081286,0.006659246],"genre_scores_gemma":[0.9799476,0.004895232,0.005703034,0.001349106,0.00008112482,0.00009208291,0.004682829,0.00009851601,0.003150452],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001394446,"threshold_uncertainty_score":0.004664898,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2013102168","doi":"10.1097/01.pas.0000126675.59108.80","title":"An Illustrated Consensus on the Classification of Pancreatic Intraepithelial Neoplasia and Intraductal Papillary Mucinous Neoplasms","year":2004,"lang":"en","type":"review","venue":"The American Journal of Surgical Pathology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1076,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"National Cancer Institute","keywords":"Intraductal papillary mucinous neoplasm; Pancreatic Intraepithelial Neoplasia; Medicine; Pathology; Pancreas; Adenocarcinoma; Pancreatic cancer; Pancreatic ductal adenocarcinoma; Cancer; Internal medicine","authors":[{"name":"Ralph H. Hruban","is_ca":true},{"name":"Kyoichi Takaori","is_ca":true},{"name":"David S. Klimstra","is_ca":false},{"name":"Volkan Adsay","is_ca":false},{"name":"Jorge Albores‐Saavedra","is_ca":false},{"name":"Andrew V. Biankin","is_ca":false},{"name":"Sandra A. Biankin","is_ca":false},{"name":"Carolyn C. Compton","is_ca":true},{"name":"Noriyoshi Fukushima","is_ca":false},{"name":"Toru Furukawa","is_ca":false},{"name":"Michael Goggins","is_ca":true},{"name":"Yo Kato","is_ca":false},{"name":"Günter Klöppel","is_ca":true},{"name":"Daniel S. Longnecker","is_ca":false},{"name":"Jütta Lüttges","is_ca":true},{"name":"Anirban Maitra","is_ca":true},{"name":"G. Johan A. Offerhaus","is_ca":false},{"name":"Suguru Yonezawa","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05564702360300125,"gpt":0.3662310206586977,"spread":0.3105839970556965,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.04298269,0.001872881,0.002586086,0.01193798,0.002911805,0.004404859,0.009212486,0.007170493,0.002726053],"category_scores_gemma":[0.04016155,0.0009917463,0.002699647,0.00895212,0.004665432,0.005777811,0.005138078,0.01597889,0.003689751],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.006608196,"about_ca_system_score_gemma":0.02253365,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00931924,"about_ca_topic_score_gemma":0.01335025,"domain_scores_codex":[0.9733372,0.008107015,0.007954045,0.00130001,0.007790324,0.001511508],"domain_scores_gemma":[0.9443169,0.005671704,0.003079194,0.002046135,0.04038714,0.004498937],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002000122,0.0001681827,0.004989933,0.002407375,0.00009918078,0.001414829,0.001932845,0.0007936184,0.002936172,0.0351947,0.5152287,0.4346344],"study_design_scores_gemma":[0.00009131394,0.0001279616,0.005026023,0.006204822,0.0001427763,0.003852838,0.001739815,0.0009043296,0.00089238,0.01821489,0.9626977,0.0001050959],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"review","genre_scores_codex":[0.008998179,0.1741646,0.1060813,0.545265,0.1047122,0.002382406,0.001486591,0.0008943639,0.05601553],"genre_scores_gemma":[0.06240362,0.1938441,0.5416983,0.1260552,0.0305663,0.004353523,0.01037545,0.0006572999,0.03004638],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.04298269,"threshold_uncertainty_score":0.2273169,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2100751052","doi":"10.1158/0008-5472.can-08-2819","title":"Epithelial to Mesenchymal Transition Contributes to Drug Resistance in Pancreatic Cancer","year":2009,"lang":"en","type":"article","venue":"Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":862,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Cancer Institute; Public Health Agency of Canada; American Cancer Society","keywords":"Pancreatic cancer; Epithelial–mesenchymal transition; Gemcitabine; Cancer research; Cisplatin; Biology; Gene silencing; Drug resistance; Gene expression profiling; Cancer; Gene expression; Internal medicine; Gene; Medicine; Metastasis; Chemotherapy; Genetics","authors":[{"name":"Thiruvengadam Arumugam","is_ca":false},{"name":"Vijaya Ramachandran","is_ca":false},{"name":"Keith F. Fournier","is_ca":false},{"name":"Huamin Wang","is_ca":false},{"name":"Lauren Marquis","is_ca":false},{"name":"James L. Abbruzzese","is_ca":false},{"name":"Gary E. Gallick","is_ca":false},{"name":"Craig D. Logsdon","is_ca":false},{"name":"David J. McConkey","is_ca":false},{"name":"Woonyoung Choi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05468919991588315,"gpt":0.4353437500200372,"spread":0.380654550104154,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001604633,0.0002234726,0.0002362239,0.0004979342,0.0002425344,0.000631479,0.0000986415,0.0002819118,0.0004742872],"category_scores_gemma":[0.0002742449,0.0001823438,0.0002106421,0.0004349134,0.0002461653,0.0002081215,0.000364118,0.0004818908,0.0001702569],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001584834,"about_ca_system_score_gemma":0.00012465,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003458369,"about_ca_topic_score_gemma":0.0004935431,"domain_scores_codex":[0.999854,0.00003251726,0.00001476139,0.00002743037,0.00004487403,0.00002648667],"domain_scores_gemma":[0.9998154,0.00003115241,0.00008780989,0.00001646298,0.00002086461,0.00002830768],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004692954,0.000094774,0.08764171,0.000154536,0.00007576138,0.0007169384,0.000181699,0.0006450954,0.8867141,0.0002549834,0.0003043879,0.02274667],"study_design_scores_gemma":[0.00001888738,0.0005255642,0.7510924,0.00003425691,0.0001194769,0.006000601,0.0006028414,0.004833402,0.2284427,0.0005754397,0.007728415,0.00002599577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926856,0.0040266,0.002209567,0.0001596499,0.00000855118,0.00002210209,0.0001900138,0.00006589179,0.0006322141],"genre_scores_gemma":[0.9960813,0.002408203,0.000829753,0.00005469923,0.00000928962,0.000011861,0.000232701,0.000006574442,0.0003656038],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000631479,"threshold_uncertainty_score":0.001586616,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2986162201","doi":"10.1158/2159-8290.cd-19-0644","title":"Single-Cell RNA Sequencing Reveals Stromal Evolution into LRRC15+ Myofibroblasts as a Determinant of Patient Response to Cancer Immunotherapy","year":2019,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":846,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Microsemi (Canada)","funders":"Genentech","keywords":"Immunotherapy; Stromal cell; Cancer research; Tumor microenvironment; Pancreatic cancer; Cancer-Associated Fibroblasts; Cancer; Cancer immunotherapy; Adenocarcinoma; Biology; Medicine; Internal medicine","authors":[{"name":"Claudia X. Dominguez","is_ca":false},{"name":"Sören Müller","is_ca":false},{"name":"Shilpa Keerthivasan","is_ca":false},{"name":"Hartmut Koeppen","is_ca":false},{"name":"Jeffrey Hung","is_ca":false},{"name":"Sarah Gierke","is_ca":false},{"name":"Beatrice Breart","is_ca":false},{"name":"Oded Foreman","is_ca":false},{"name":"Travis W. Bainbridge","is_ca":false},{"name":"Alessandra Castiglioni","is_ca":false},{"name":"Yasin Şenbabaoğlu","is_ca":false},{"name":"Zora Modrušan","is_ca":true},{"name":"Yuxin Liang","is_ca":true},{"name":"Melissa R. Junttila","is_ca":false},{"name":"Christiaan Klijn","is_ca":false},{"name":"Richard Bourgon","is_ca":false},{"name":"Shannon J. Turley","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01890761537577933,"gpt":0.322110409239435,"spread":0.3032027938636556,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002701346,0.00008382784,0.000237565,0.0002485185,0.0001126514,0.0003792211,0.00007730333,0.0001692461,0.001568552],"category_scores_gemma":[0.0004503495,0.0000634421,0.0001069193,0.0002189741,0.0001181472,0.00009366726,0.00009170023,0.0002184294,0.0003570351],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001358677,"about_ca_system_score_gemma":0.00008834081,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002632157,"about_ca_topic_score_gemma":0.0004255143,"domain_scores_codex":[0.9998333,0.00002897358,0.00001450503,0.00005119843,0.00004529359,0.00002665404],"domain_scores_gemma":[0.9997469,0.00009349516,0.000063762,0.00002316716,0.00004123223,0.00003143347],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001248344,0.00008287532,0.1134618,0.00007920124,0.00006386092,0.000415339,0.0001734257,0.0006133856,0.849085,0.0001068174,0.0009504472,0.03371951],"study_design_scores_gemma":[0.00005527804,0.001238233,0.6214895,0.00002137731,0.0001272781,0.003302155,0.0004107287,0.006229255,0.3592664,0.0002562364,0.007584603,0.00001878685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995926,0.0005726773,0.001565583,0.0001010307,0.0000162833,0.00002161693,0.0009124686,0.00004328529,0.0008412157],"genre_scores_gemma":[0.996807,0.0001895677,0.001188412,0.00008255296,0.00001542283,0.00002632674,0.0008672627,0.00001501086,0.0008085397],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001568552,"threshold_uncertainty_score":0.005247355,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2112474929","doi":"10.1038/nrclinonc.2009.236","title":"Advanced pancreatic carcinoma: current treatment and future challenges","year":2010,"lang":"en","type":"review","venue":"Nature Reviews Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":791,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre","funders":"Vedecká Grantová Agentúra MŠVVaŠ SR a SAV","keywords":"Medicine; Pancreatic carcinoma; Current (fluid); Oncology; Carcinoma; Internal medicine; General surgery; Medical physics; Intensive care medicine; Pancreatic cancer; Cancer","authors":[{"name":"Anastasios Stathis","is_ca":true},{"name":"Malcolm J. Moore","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2586644263938099,"gpt":0.5656768351710881,"spread":0.3070124087772783,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001254936,0.00103725,0.002574484,0.001786193,0.0003183372,0.00180223,0.0009378738,0.001504632,0.003678416],"category_scores_gemma":[0.001396194,0.0003818011,0.000688568,0.002588302,0.0008089527,0.003292515,0.001032822,0.00248541,0.002004562],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009043174,"about_ca_system_score_gemma":0.001761361,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001268759,"about_ca_topic_score_gemma":0.003991552,"domain_scores_codex":[0.999726,0.00005900233,0.0000418576,0.00005051383,0.00009186693,0.00003074676],"domain_scores_gemma":[0.9992538,0.0003812027,0.00009936659,0.00001921251,0.0001780606,0.00006830831],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001207551,0.00005518307,0.0002680977,0.01033947,0.00007959559,0.0002076141,0.00003662869,0.0004603142,0.0005376998,0.001978034,0.04782386,0.9380927],"study_design_scores_gemma":[0.00005747161,0.000141527,0.0009677006,0.005969767,0.0002389495,0.001628353,0.0001603784,0.0002215425,0.0002090193,0.002792275,0.9875825,0.00003052171],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00005356499,0.9986952,0.00007190964,0.0005721012,0.0002220635,0.000001565616,0.000008615971,0.00000484794,0.0003701399],"genre_scores_gemma":[0.0004004438,0.9985442,0.0001173612,0.0003470096,0.0003473785,0.000002693776,0.00001536862,0.000001082858,0.0002244255],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.003678416,"threshold_uncertainty_score":0.0123055,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2959096163","doi":"10.1001/jamaoncol.2019.1588","title":"Durvalumab With or Without Tremelimumab for Patients With Metastatic Pancreatic Ductal Adenocarcinoma","year":2019,"lang":"en","type":"article","venue":"JAMA Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":765,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Cancer Institute; AstraZeneca","keywords":"Durvalumab; Medicine; Tremelimumab; Gemcitabine; Internal medicine; Population; Combination therapy; Oncology; Surgery; Cancer; Immunotherapy; Ipilimumab; Nivolumab","authors":[{"name":"Eileen M. O’Reilly","is_ca":false},{"name":"Do‐Youn Oh","is_ca":false},{"name":"Neesha C. Dhani","is_ca":true},{"name":"Daniel J. Renouf","is_ca":false},{"name":"Myung Ah Lee","is_ca":false},{"name":"Weijing Sun","is_ca":false},{"name":"George A. Fisher","is_ca":false},{"name":"Aram F. Hezel","is_ca":false},{"name":"Shao-Chun Chang","is_ca":false},{"name":"Gordana Vlahovic","is_ca":false},{"name":"Osamu Takahashi","is_ca":false},{"name":"Yin Yang","is_ca":false},{"name":"David Fitts","is_ca":false},{"name":"Philip Agop Philip","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03113434771125084,"gpt":0.3374684671745833,"spread":0.3063341194633324,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007303766,0.000314203,0.0009330782,0.0001722365,0.0002050821,0.0005233343,0.0002730833,0.0003773401,0.002045451],"category_scores_gemma":[0.000833218,0.0001976833,0.0006668358,0.0002046577,0.0002708361,0.0005695305,0.0001972129,0.0009898301,0.0002883839],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004875884,"about_ca_system_score_gemma":0.0009358547,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003273498,"about_ca_topic_score_gemma":0.001779917,"domain_scores_codex":[0.9997347,0.0001173087,0.00002608689,0.00004720867,0.0000351402,0.00003953432],"domain_scores_gemma":[0.9997039,0.00006876717,0.00008056867,0.00002065245,0.0000172373,0.0001087323],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.524036,0.01937355,0.05068102,0.001687352,0.002876184,0.0007458244,0.0002274165,0.002763053,0.04381258,0.0004511033,0.005074808,0.3482711],"study_design_scores_gemma":[0.3863547,0.4727149,0.09353223,0.0002122122,0.003138951,0.001995399,0.0002042924,0.005403046,0.01679763,0.0005596327,0.01903709,0.00004986635],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922131,0.004770249,0.0002469216,0.0004130106,0.00009188501,0.0003434077,0.0002194041,0.00003295351,0.001669051],"genre_scores_gemma":[0.9970192,0.00124696,0.0005038907,0.0002383168,0.00006733737,0.000170848,0.0001540504,0.00000395704,0.0005955122],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002045451,"threshold_uncertainty_score":0.006842732,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2073768319","doi":"10.1001/jama.299.9.1019","title":"Fluorouracil vs Gemcitabine Chemotherapy Before and After Fluorouracil-Based Chemoradiation Following Resection of Pancreatic Adenocarcinoma","year":2008,"lang":"en","type":"article","venue":"JAMA","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":749,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"National Cancer Institute","keywords":"Medicine; Gemcitabine; Fluorouracil; Hazard ratio; Adenocarcinoma; Chemotherapy; Internal medicine; Confidence interval; Pancreatic cancer; Chemoradiotherapy; Survival rate; Gastroenterology; Surgery; Oncology; Cancer","authors":[{"name":"William F. Regine","is_ca":false},{"name":"Kathryn Winter","is_ca":false},{"name":"Ross A. Abrams","is_ca":false},{"name":"Howard Safran","is_ca":false},{"name":"John P. Hoffman","is_ca":false},{"name":"André Konski","is_ca":false},{"name":"Al B. Benson","is_ca":false},{"name":"John S. Macdonald","is_ca":false},{"name":"Mahesh Kudrimoti","is_ca":false},{"name":"Mitchel Fromm","is_ca":false},{"name":"Michael G. Haddock","is_ca":false},{"name":"Paul Schaefer","is_ca":false},{"name":"Christopher G. Willett","is_ca":false},{"name":"Tyvin A. Rich","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01782689698889571,"gpt":0.2832300540011901,"spread":0.2654031570122943,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00121617,0.0004701655,0.00120117,0.000281116,0.0003476272,0.0005427949,0.0004984484,0.0008300514,0.002074093],"category_scores_gemma":[0.001992641,0.0002751178,0.001035323,0.0003324534,0.000532944,0.0003721946,0.0002491399,0.001308848,0.0001699212],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001484824,"about_ca_system_score_gemma":0.002005942,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004619709,"about_ca_topic_score_gemma":0.0218738,"domain_scores_codex":[0.999268,0.0003559652,0.00005803053,0.0000816184,0.00008493885,0.0001514983],"domain_scores_gemma":[0.9986052,0.0004359403,0.0003954463,0.00005616334,0.00005701623,0.0004502562],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"observational","study_design_scores_codex":[0.9523707,0.009457588,0.005284369,0.0004190097,0.0008426739,0.00005515799,0.00005074598,0.0006124313,0.00252726,0.00005408918,0.0003598966,0.02796616],"study_design_scores_gemma":[0.4440976,0.5062623,0.04128157,0.0001863399,0.002373678,0.0001446298,0.00007975575,0.0008682777,0.002862593,0.0001240937,0.001689745,0.00002951633],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965752,0.002070719,0.00007529461,0.0001339116,0.0001157967,0.0004245167,0.00007593989,0.000008099605,0.0005204182],"genre_scores_gemma":[0.9974936,0.001125395,0.0002079201,0.000169978,0.0001450908,0.0003185125,0.0001548964,0.00000195979,0.0003827061],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004619709,"threshold_uncertainty_score":0.01077324,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2999027176","doi":"10.1038/s41588-019-0566-9","title":"Transcription phenotypes of pancreatic cancer are driven by genomic events during tumor evolution","year":2020,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":689,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre; Canada's Michael Smith Genome Sciences Centre; University of British Columbia; Pancreas Centre (Canada); Vancouver General Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; University Health Network; Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"","keywords":"Biology; Transcriptome; KRAS; Pancreatic cancer; Genetics; Genome instability; Genetic heterogeneity; Chromothripsis; Phenotype; Genome; Gene; Tumor progression; Comparative genomic hybridization; Chromosome instability; Computational biology; Cancer; Mutation; Gene expression; DNA; Chromosome","authors":[{"name":"Michelle Chan‐Seng‐Yue","is_ca":true},{"name":"Jaeseung Kim","is_ca":true},{"name":"Gavin W. Wilson","is_ca":true},{"name":"Karen Ng","is_ca":true},{"name":"Eugenia Flores‐Figueroa","is_ca":true},{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Ashton A. Connor","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Robert C. Grant","is_ca":true},{"name":"Jessica McLeod","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Gun Ho Jang","is_ca":true},{"name":"Amy Zhang","is_ca":true},{"name":"Anna Dodd","is_ca":true},{"name":"Sheng‐Ben Liang","is_ca":true},{"name":"Ayelet Borgida","is_ca":true},{"name":"Dianne Chadwick","is_ca":true},{"name":"Sangeetha Kalimuthu","is_ca":true},{"name":"Ilinca M. Lungu","is_ca":true},{"name":"John M.S. Bartlett","is_ca":true},{"name":"Paul M. Krzyzanowski","is_ca":true},{"name":"Vandana Sandhu","is_ca":true},{"name":"Hervé Tiriac","is_ca":false},{"name":"Fieke E. M. Froeling","is_ca":false},{"name":"Joanna M. Karasinska","is_ca":true},{"name":"James T. Topham","is_ca":true},{"name":"Daniel J. Renouf","is_ca":true},{"name":"David F. Schaeffer","is_ca":true},{"name":"Steven J.M. Jones","is_ca":true},{"name":"Marco A. Marra","is_ca":true},{"name":"Janessa Laskin","is_ca":false},{"name":"Runjan Chetty","is_ca":true},{"name":"Lincoln Stein","is_ca":true},{"name":"George Zogopoulos","is_ca":true},{"name":"Benjamin Haibe‐Kains","is_ca":true},{"name":"Peter J. Campbell","is_ca":false},{"name":"David A. Tuveson","is_ca":false},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Sandra E. Fischer","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Faiyaz Notta","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01687609019782679,"gpt":0.3000861783805061,"spread":0.2832100881826793,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001910686,0.000197934,0.0001975744,0.0003631536,0.0001966492,0.0005822179,0.0001759822,0.0002797814,0.001746907],"category_scores_gemma":[0.000341504,0.0002249674,0.0002244943,0.000320757,0.0003567273,0.0002595776,0.0005410023,0.0006905526,0.0004156909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004019567,"about_ca_system_score_gemma":0.000171824,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007718207,"about_ca_topic_score_gemma":0.001567558,"domain_scores_codex":[0.9998011,0.00003482581,0.00001006487,0.00006112406,0.00004254432,0.00005036903],"domain_scores_gemma":[0.9997848,0.00006446371,0.00005583121,0.00003227927,0.00002191168,0.00004083449],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002856717,0.00001094451,0.01088635,0.00002661754,0.00001188149,0.0001755128,0.0001026757,0.000373082,0.9833323,0.0008944734,0.0001496622,0.003750868],"study_design_scores_gemma":[0.00004040173,0.0002168268,0.4736691,0.00002882734,0.00005031013,0.001743217,0.000644195,0.004873728,0.5076419,0.002220499,0.008831158,0.00003992117],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901764,0.0008006523,0.004567303,0.0003041203,0.00002726802,0.000009053882,0.0007424958,0.0001134574,0.003259278],"genre_scores_gemma":[0.9967404,0.0003585376,0.0007823463,0.0001062906,0.00001242257,0.000009180644,0.0005735311,0.00006341505,0.001353819],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001746907,"threshold_uncertainty_score":0.005843937,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4233651632","doi":"10.1016/s2468-1253(19)30347-4","title":"The global, regional, and national burden of pancreatic cancer and its attributable risk factors in 195 countries and territories, 1990–2017: a systematic analysis for the Global Burden of Disease Study 2017","year":2019,"lang":"en","type":"article","venue":"The Lancet. Gastroenterology & hepatology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":672,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Đại học Quốc gia Hà Nội; Applied Molecular Biosciences Unit; I.M. Sechenov First Moscow State Medical University; University of Gondar; University of Tabriz; Universidade do Porto; Baki Dövlət Universiteti; Babol University of Medical Sciences; Baqiyatallah University of Medical Sciences; National Center of Neurology and Psychiatry; Islamic Azad University; Universitetet i Bergen; Laboratório Associado para a Química Verde; Golestan University of Medical Sciences; Seoul National University Hospital; Seoul National University; University of Toronto; Bauman Moscow State Technical University; Fundação para a Ciência e a Tecnologia; Bill and Melinda Gates Foundation; Tabriz University of Medical Sciences; Public Health Agency; Mansoura University; Public Health Agency of Canada; McGill University; Fuel Cell Technologies Program; Sharif University of Technology; Duke Global Health Institute, Duke University; Trường Đại học Duy Tân; Iran University of Medical Sciences; Wuhan University; Instituto de Salud Carlos III; Ministério da Ciência, Tecnologia e Ensino Superior; Rede de Química e Tecnologia; Generalitat Valenciana; University of Washington; Università di Catania","keywords":"Medicine; Pancreatic cancer; Incidence (geometry); Demography; Cancer; Environmental health; Disease burden; Cancer registry; Mortality rate; Burden of disease; Disease; Body mass index; Gerontology; Internal medicine; Population","authors":[{"name":"Akram Pourshams","is_ca":false},{"name":"Sadaf G Sepanlou","is_ca":false},{"name":"Kevin S Ikuta","is_ca":false},{"name":"Catherine Bisignano","is_ca":false},{"name":"Saeid Safiri","is_ca":false},{"name":"Gholamreza Roshandel","is_ca":false},{"name":"Mehdi Sharif","is_ca":false},{"name":"Morteza Khatibian","is_ca":false},{"name":"Christina Fitzmaurice","is_ca":false},{"name":"Molly R Nixon","is_ca":false},{"name":"Nooshin Abbasi","is_ca":false},{"name":"Mohsen Afarideh","is_ca":false},{"name":"Elham Ahmadian","is_ca":false},{"name":"Tomi Akinyemiju","is_ca":false},{"name":"Fares Alahdab","is_ca":false},{"name":"Shazia Alam","is_ca":false},{"name":"Vahid Alipour","is_ca":false},{"name":"Christine A. Allen","is_ca":false},{"name":"Nahla Anber","is_ca":false},{"name":"Alireza Ansari‐Moghaddam","is_ca":false},{"name":"Jalal Arabloo","is_ca":false},{"name":"Alaa Badawi","is_ca":false},{"name":"Mojtaba Bagherzadeh","is_ca":false},{"name":"Yaschilal Muche Belayneh","is_ca":false},{"name":"Belete Biadgo","is_ca":false},{"name":"Ali Bijani","is_ca":false},{"name":"Antonio Biondi","is_ca":false},{"name":"Tone Bjørge","is_ca":false},{"name":"Antonio Maria Borzì","is_ca":false},{"name":"Cristina Bosetti","is_ca":false},{"name":"Andrey Briko","is_ca":false},{"name":"Н. И. Брико","is_ca":false},{"name":"Giulia Carreras","is_ca":false},{"name":"Félix Carvalho","is_ca":false},{"name":"Jee-Young Jasmine Choi","is_ca":false},{"name":"Dinh‐Toi Chu","is_ca":false},{"name":"Anh Kim Dang","is_ca":false},{"name":"Ahmad Daryani","is_ca":false},{"name":"Dragoş Virgil Daviţoiu","is_ca":false},{"name":"Gebre Teklemariam Demoz","is_ca":false},{"name":"Rupak Desai","is_ca":false},{"name":"Subhojit Dey","is_ca":false},{"name":"Hoa Do","is_ca":false},{"name":"Huyen Phuc","is_ca":false},{"name":"Aziz Eftekhari","is_ca":false},{"name":"Alireza Esteghamati","is_ca":false},{"name":"Farshad Farzadfar","is_ca":false},{"name":"Eduarda Fernandes","is_ca":false},{"name":"Irina Filip","is_ca":false},{"name":"Florian Fischer","is_ca":false},{"name":"Masoud Foroutan","is_ca":false},{"name":"Mohamed M. Gad","is_ca":false},{"name":"Silvano Gallus","is_ca":false},{"name":"Birhanu Geta","is_ca":false},{"name":"Giuseppe Gorini","is_ca":false},{"name":"Nima Hafezi‐Nejad","is_ca":false},{"name":"James Harvey","is_ca":false},{"name":"Milad Hasankhani","is_ca":false},{"name":"Amir Hasanzadeh","is_ca":false},{"name":"Soheil Hassanipour","is_ca":false},{"name":"Simon I Hay","is_ca":false},{"name":"Hagos D Hidru","is_ca":false},{"name":"Chi Linh Hoang","is_ca":false},{"name":"Sorin Hostiuc","is_ca":false},{"name":"Mowafa Househ","is_ca":false},{"name":"Olayinka Stephen Ilesanmi","is_ca":false},{"name":"Milena Ilić","is_ca":false},{"name":"Seyed Sina Naghibi Irvani","is_ca":false},{"name":"Nader Jafari Balalami","is_ca":false},{"name":"Spencer L James","is_ca":false},{"name":"Farahnaz Joukar","is_ca":false},{"name":"Amir Kasaeian","is_ca":false},{"name":"Tesfaye Kassa","is_ca":false},{"name":"André Pascal Kengne","is_ca":false},{"name":"Rovshan Khalilov","is_ca":false},{"name":"Ejaz Ahmad Khan","is_ca":false},{"name":"Amir M Khater","is_ca":false},{"name":"Fatemeh Khosravi Shadmani","is_ca":false},{"name":"Jonathan Kocarnik","is_ca":false},{"name":"Hamidreza Komaki","is_ca":false},{"name":"Ai Koyanagi","is_ca":false},{"name":"Vivek Kumar","is_ca":false},{"name":"Carlo La Vecchia","is_ca":false},{"name":"Platon D Lopukhov","is_ca":false},{"name":"Farzad Manafi","is_ca":false},{"name":"Navid Manafi","is_ca":false},{"name":"Ana-Laura Manda","is_ca":false},{"name":"Fariborz Mansour‐Ghanaei","is_ca":false},{"name":"Dhruv Mehta","is_ca":false},{"name":"Varshil Mehta","is_ca":false},{"name":"Toni Meier","is_ca":false},{"name":"Hagazi Gebre Meles","is_ca":false},{"name":"Getnet Mengistu","is_ca":false},{"name":"Tomasz Miazgowski","is_ca":false},{"name":"Mehdi Mohamadnejad","is_ca":false},{"name":"Abdollah Mohammadian-Hafshejani","is_ca":false},{"name":"Milad Mohammadoo-Khorasani","is_ca":false},{"name":"Shafiu Mohammed","is_ca":false},{"name":"Farnam Mohebi","is_ca":false},{"name":"Ali H. Mokdad","is_ca":false},{"name":"Lorenzo Monasta","is_ca":false},{"name":"Maryam Moossavi","is_ca":false},{"name":"Rahmatollah Moradzadeh","is_ca":false},{"name":"Gurudatta Naik","is_ca":false},{"name":"Ionuţ Negoi","is_ca":false},{"name":"Cuong Tat Nguyen","is_ca":false},{"name":"Long Hoang Nguyen","is_ca":false},{"name":"Trang Huyen Nguyen","is_ca":false},{"name":"Andrew T Olagunju","is_ca":false},{"name":"Tinuke O Olagunju","is_ca":false},{"name":"Alyssa Pennini","is_ca":false},{"name":"Mohammad Rabiee","is_ca":false},{"name":"Navid Rabiee","is_ca":false},{"name":"Amir Radfar","is_ca":false},{"name":"Mahdi Rahimi","is_ca":false},{"name":"Goura Kishor Rath","is_ca":false},{"name":"David Laith Rawaf","is_ca":false},{"name":"Salman Rawaf","is_ca":false},{"name":"Robert C. Reiner","is_ca":false},{"name":"Nima Rezaei","is_ca":false},{"name":"Aziz Rezapour","is_ca":false},{"name":"Anas M. Saad","is_ca":false},{"name":"Seyedmohammad Saadatagah","is_ca":false},{"name":"Amirhossein Sahebkar","is_ca":false},{"name":"Hamideh Salimzadeh","is_ca":false},{"name":"Abdallah M Samy","is_ca":false},{"name":"Juan Sanabria","is_ca":false},{"name":"Arash Sarveazad","is_ca":false},{"name":"Monika Sawhney","is_ca":false},{"name":"Mario Šekerija","is_ca":false},{"name":"P. I. Shabalkin","is_ca":false},{"name":"Masood Ali Shaikh","is_ca":false},{"name":"Rajesh Sharma","is_ca":false},{"name":"Sara Sheikhbahaei","is_ca":false},{"name":"Reza Shirkoohi","is_ca":false},{"name":"Sudeep K Siddappa Malleshappa","is_ca":false},{"name":"Mekonnen Sisay","is_ca":false},{"name":"Kjetil Søreide","is_ca":false},{"name":"Sergey Soshnikov","is_ca":false},{"name":"Rasoul Sotoudehmanesh","is_ca":false},{"name":"Vladimir I. Starodubov","is_ca":false},{"name":"Michelle Subart","is_ca":false},{"name":"Rafael Tabarés‐Seisdedos","is_ca":false},{"name":"Degena Bahrey Tadesse","is_ca":false},{"name":"Eugenio Traini","is_ca":false},{"name":"Bach Xuan Tran","is_ca":false},{"name":"Khanh Bao Tran","is_ca":false},{"name":"Irfan Ullah","is_ca":false},{"name":"Marco Vacante","is_ca":false},{"name":"Amir Vahedian‐Azimi","is_ca":false},{"name":"Elena A. Varavikova","is_ca":false},{"name":"Ronny Westerman","is_ca":false},{"name":"Dawit Dawit Zewdu Wondafrash","is_ca":false},{"name":"Rixing Xu","is_ca":false},{"name":"Naohiro Yonemoto","is_ca":false},{"name":"Vesna Zadnik","is_ca":false},{"name":"Zhi‐Jiang Zhang","is_ca":false},{"name":"Reza Malekzadeh","is_ca":false},{"name":"Mohsen Naghavi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04019376759678434,"gpt":0.344782914913395,"spread":0.3045891473166106,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006440799,0.0008902861,0.003085379,0.007704967,0.000421019,0.001163568,0.0006975892,0.0005453736,0.001480899],"category_scores_gemma":[0.01282535,0.0007286067,0.01001181,0.0141203,0.000604957,0.0009463753,0.001677542,0.0009447617,0.0002875611],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002466464,"about_ca_system_score_gemma":0.008328399,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.07157595,"about_ca_topic_score_gemma":0.1098668,"domain_scores_codex":[0.9961839,0.001059764,0.001124548,0.0005254593,0.0008687638,0.0002374056],"domain_scores_gemma":[0.9945378,0.00173727,0.001761628,0.0003138694,0.001468156,0.0001813415],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"systematic_review","study_design_scores_codex":[0.00104834,0.00003693156,0.669692,0.1099446,0.08293063,0.0002834846,0.001033373,0.002017221,0.0003074296,0.001417153,0.03985711,0.09143173],"study_design_scores_gemma":[0.000557749,0.000203254,0.753876,0.07234903,0.1147286,0.001147594,0.001441922,0.001558112,0.0004382854,0.00162337,0.05189171,0.0001843155],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.08036599,0.7932445,0.002176805,0.001853024,0.0004150015,0.0004958326,0.1192423,0.0001308655,0.002075776],"genre_scores_gemma":[0.3884684,0.5474186,0.004929389,0.001241353,0.0003948268,0.001662293,0.05508822,0.00009347671,0.0007034777],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.07157595,"threshold_uncertainty_score":0.1423187,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2069376956","doi":"10.1038/nm.3686","title":"Elevation of circulating branched-chain amino acids is an early event in human pancreatic adenocarcinoma development","year":2014,"lang":"en","type":"article","venue":"Nature Medicine","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":662,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute on Aging; Howard Hughes Medical Institute","keywords":"Pancreatic cancer; Internal medicine; Cancer; Pancreas; Endocrinology; Disease; Medicine; Adenocarcinoma; KRAS; Biology; Oncology; Colorectal cancer","authors":[{"name":"Jared R. Mayers","is_ca":false},{"name":"Chen Wu","is_ca":false},{"name":"Clary B. Clish","is_ca":false},{"name":"Peter Kraft","is_ca":false},{"name":"Margaret E. Torrence","is_ca":false},{"name":"Brian P. Fiske","is_ca":false},{"name":"Chen Yuan","is_ca":false},{"name":"Ying Bao","is_ca":false},{"name":"Mary K. Townsend","is_ca":false},{"name":"Shelley S. Tworoger","is_ca":false},{"name":"Shawn M. Davidson","is_ca":false},{"name":"Thales Papagiannakopoulos","is_ca":false},{"name":"Annan Yang","is_ca":false},{"name":"Talya L. Dayton","is_ca":false},{"name":"Shuji Ogino","is_ca":false},{"name":"Meir J. Stampfer","is_ca":false},{"name":"Edward L. Giovannucci","is_ca":false},{"name":"Zhi Rong Qian","is_ca":false},{"name":"Douglas A. Rubinson","is_ca":false},{"name":"Jing Ma","is_ca":false},{"name":"Howard D. Sesso","is_ca":false},{"name":"John Michael Gaziano","is_ca":false},{"name":"Barbara B. Cochrane","is_ca":false},{"name":"Simin Liu","is_ca":false},{"name":"Jean Wactawski‐Wende","is_ca":false},{"name":"JoAnn E. Manson","is_ca":false},{"name":"Michaël Pollak","is_ca":true},{"name":"Alec C. Kimmelman","is_ca":false},{"name":"Amanda Souza","is_ca":false},{"name":"Kerry A. Pierce","is_ca":false},{"name":"Thomas J. Wang","is_ca":false},{"name":"Robert E. Gerszten","is_ca":false},{"name":"Charles S. Fuchs","is_ca":false},{"name":"Matthew G. Vander Heiden","is_ca":false},{"name":"Brian M. Wolpin","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02869475089696376,"gpt":0.3517657082771387,"spread":0.3230709573801749,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002439668,0.0002634603,0.0004049593,0.0009690256,0.0002496271,0.0006808469,0.0001677428,0.0004217272,0.001413308],"category_scores_gemma":[0.0005634841,0.0002674494,0.0002178246,0.0006457071,0.0002497494,0.0003397324,0.0003358523,0.0008516792,0.0003945265],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003315083,"about_ca_system_score_gemma":0.0003275634,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006088821,"about_ca_topic_score_gemma":0.0006585104,"domain_scores_codex":[0.9998277,0.00003713937,0.00001505091,0.00003283739,0.0000495729,0.00003764846],"domain_scores_gemma":[0.9993281,0.0001380737,0.0002078855,0.00004395527,0.00007828435,0.0002036666],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.01132276,0.0002813713,0.4064041,0.0001469791,0.00007843116,0.005262005,0.0001774865,0.0002095643,0.5556662,0.0003316886,0.0003800254,0.0197394],"study_design_scores_gemma":[0.0000300571,0.0007930639,0.8908371,0.00001576003,0.00006619217,0.004426273,0.000294784,0.0005135005,0.1007932,0.0003234998,0.001886648,0.00001986108],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944511,0.002126093,0.001351574,0.00009282889,0.00002807804,0.00002682618,0.0004539568,0.00006807316,0.001401457],"genre_scores_gemma":[0.9964423,0.0009206302,0.000976083,0.00003712285,0.00003025504,0.00001690334,0.0006541295,0.000008348352,0.0009142785],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001413308,"threshold_uncertainty_score":0.004728019,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2780727948","doi":"10.1158/1078-0432.ccr-17-2994","title":"Genomics-Driven Precision Medicine for Advanced Pancreatic Cancer: Early Results from the COMPASS Trial","year":2017,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":636,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Ontario Institute for Cancer Research; University of Toronto; University Health Network; BC Cancer Agency; Princess Margaret Cancer Centre","funders":"Canadian Cancer Society Research Institute; National Cancer Institute; Canadian Friends of Tel Aviv University; Ontario Institute for Cancer Research; Division of Cancer Prevention, National Cancer Institute","keywords":"Pancreatic cancer; Transcriptome; Medicine; Clinical endpoint; Oncology; FOLFIRINOX; Biopsy; Cancer; Precision medicine; Internal medicine; Biology; Pathology; Gene; Clinical trial; Gene expression; Genetics","authors":[{"name":"Kyaw Aung","is_ca":true},{"name":"Sandra E. Fischer","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Gun-Ho Jang","is_ca":true},{"name":"Anna Dodd","is_ca":true},{"name":"Sean Creighton","is_ca":true},{"name":"Bernadette Southwood","is_ca":true},{"name":"Sheng‐Ben Liang","is_ca":true},{"name":"Dianne Chadwick","is_ca":true},{"name":"Amy Zhang","is_ca":true},{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Hamzeh Albaba","is_ca":true},{"name":"Shari Moura","is_ca":true},{"name":"Robert C. Grant","is_ca":true},{"name":"Jessica K. Miller","is_ca":true},{"name":"Faridah Mbabaali","is_ca":true},{"name":"Danielle Pasternack","is_ca":true},{"name":"Ilinca M. Lungu","is_ca":true},{"name":"John M.S. Bartlett","is_ca":true},{"name":"Sangeet Ghai","is_ca":true},{"name":"Mathieu Lemire","is_ca":true},{"name":"Spring Holter","is_ca":true},{"name":"Ashton A. Connor","is_ca":true},{"name":"Richard A. Moffitt","is_ca":false},{"name":"Jen Jen Yeh","is_ca":false},{"name":"Lee E. Timms","is_ca":true},{"name":"Paul M. Krzyzanowski","is_ca":true},{"name":"Neesha C. Dhani","is_ca":true},{"name":"David W. Hedley","is_ca":true},{"name":"Faiyaz Notta","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Jennifer J. Knox","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.4546718383273811,"gpt":0.6054100502091737,"spread":0.1507382118817926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001602875,0.0005074687,0.0005194267,0.0001500205,0.0001244656,0.0007880601,0.0001902598,0.0003302323,0.002665466],"category_scores_gemma":[0.001413121,0.00006809909,0.0005169247,0.0002942185,0.0004035692,0.000307281,0.0003533301,0.0005875094,0.0002343614],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007390298,"about_ca_system_score_gemma":0.0008075793,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006245126,"about_ca_topic_score_gemma":0.001102832,"domain_scores_codex":[0.9994106,0.0004099771,0.00001311298,0.00006185197,0.00006079904,0.00004366371],"domain_scores_gemma":[0.9993086,0.0002205418,0.0001421171,0.00006333952,0.00006840776,0.0001970757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.5113462,0.003251251,0.08301807,0.001451974,0.00599768,0.0004363353,0.0002786315,0.005519439,0.01896494,0.003261538,0.01902146,0.3474525],"study_design_scores_gemma":[0.3326954,0.1566128,0.3620309,0.001299804,0.009830845,0.001624684,0.0007728941,0.00968835,0.02443261,0.008967631,0.09182359,0.000220473],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9719923,0.01584817,0.001159231,0.004906397,0.0002751277,0.0001604811,0.001202757,0.00006826373,0.004387283],"genre_scores_gemma":[0.9899143,0.003434756,0.001218212,0.001884836,0.0004157567,0.0001353367,0.001461824,0.00001743307,0.001517516],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002665466,"threshold_uncertainty_score":0.008916855,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2102413929","doi":"10.1038/ng.522","title":"A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33","year":2010,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":614,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Cancer Care Ontario; Mount Sinai Hospital","funders":"National Cancer Institute; National Institutes of Health; Mayo Clinic","keywords":"Single-nucleotide polymorphism; Biology; Locus (genetics); Genetics; Allele; Genome-wide association study; Genotype; Odds ratio; SNP; Pancreatic cancer; Internal medicine; Cancer; Gene; Medicine","authors":[{"name":"Gloria M. Petersen","is_ca":false},{"name":"Laufey T. Ámundadóttir","is_ca":false},{"name":"Charles S. Fuchs","is_ca":false},{"name":"Peter Kraft","is_ca":false},{"name":"Rachael Z. Stolzenberg‐Solomon","is_ca":false},{"name":"Kevin B. Jacobs","is_ca":false},{"name":"Alan A. Arslan","is_ca":false},{"name":"H. Bas Bueno‐de‐Mesquita","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"Myron D. Gross","is_ca":false},{"name":"Kathy J. Helzlsouer","is_ca":false},{"name":"Elizabeth A. Holly","is_ca":false},{"name":"Eric J. Jacobs","is_ca":false},{"name":"Alison P. Klein","is_ca":false},{"name":"Andrea Z. LaCroix","is_ca":false},{"name":"Donghui Li","is_ca":false},{"name":"Margaret T. Mandelson","is_ca":false},{"name":"Sara H. Olson","is_ca":false},{"name":"Harvey A. Risch","is_ca":false},{"name":"Wei Zheng","is_ca":false},{"name":"Demetrius Albanes","is_ca":false},{"name":"William R. Bamlet","is_ca":false},{"name":"Christine D. Berg","is_ca":false},{"name":"Marie‐Christine Boutron‐Ruault","is_ca":false},{"name":"Julie E. Buring","is_ca":false},{"name":"Paige M. Bracci","is_ca":false},{"name":"Federico Canzian","is_ca":false},{"name":"Sandra Clipp","is_ca":false},{"name":"Michelle Cotterchio","is_ca":true},{"name":"Mariza de Andrade","is_ca":false},{"name":"Eric J. Duell","is_ca":false},{"name":"J. Michael Gaziano","is_ca":false},{"name":"Edward L. Giovannucci","is_ca":false},{"name":"Michael Goggins","is_ca":false},{"name":"Göran Hallmans","is_ca":false},{"name":"Susan E. Hankinson","is_ca":false},{"name":"Manal M. Hassan","is_ca":false},{"name":"Barbara V. Howard","is_ca":false},{"name":"David J. Hunter","is_ca":false},{"name":"Amy Hutchinson","is_ca":false},{"name":"Mazda Jenab","is_ca":false},{"name":"Rudolf Kaaks","is_ca":false},{"name":"Charles Kooperberg","is_ca":false},{"name":"Vittorio Krogh","is_ca":false},{"name":"Robert C. Kurtz","is_ca":false},{"name":"Shannon M. Lynch","is_ca":false},{"name":"Robert R. McWilliams","is_ca":false},{"name":"Julie B. Mendelsohn","is_ca":false},{"name":"Dominique S. Michaud","is_ca":false},{"name":"Hemang Parikh","is_ca":false},{"name":"Alpa V. Patel","is_ca":false},{"name":"Petra H. Peeters","is_ca":false},{"name":"Aleksandar Rajkovic","is_ca":false},{"name":"Elio Ríboli","is_ca":false},{"name":"Laudina Rodríguez","is_ca":false},{"name":"Daniela Seminara","is_ca":false},{"name":"Xiao‐Ou Shu","is_ca":false},{"name":"Gilles Thomas","is_ca":false},{"name":"Anne Tjønneland","is_ca":false},{"name":"Geoffrey S. Tobias","is_ca":false},{"name":"Dimitrios Trichopoulos","is_ca":false},{"name":"Stephen K. Van Den Eeden","is_ca":false},{"name":"Jarmo Virtamo","is_ca":false},{"name":"Jean Wactawski‐Wende","is_ca":false},{"name":"Zhaoming Wang","is_ca":false},{"name":"Brian M. Wolpin","is_ca":false},{"name":"Herbert Yu","is_ca":false},{"name":"Kai Yu","is_ca":false},{"name":"Anne Zeleniuch‐Jacquotte","is_ca":false},{"name":"Joseph F. Fraumeni","is_ca":false},{"name":"Robert N. Hoover","is_ca":false},{"name":"Patricia Hartge","is_ca":false},{"name":"Stephen J. Chanock","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01612663654390315,"gpt":0.3442386196704849,"spread":0.3281119831265817,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008637412,0.0007623985,0.0005345474,0.001684965,0.0007616379,0.0007210837,0.0007819497,0.0008128347,0.005230603],"category_scores_gemma":[0.00239025,0.0004225471,0.001058133,0.001932082,0.0004973043,0.0002056047,0.0008648798,0.00118222,0.0003810752],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003342588,"about_ca_system_score_gemma":0.0004394982,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007332632,"about_ca_topic_score_gemma":0.01302984,"domain_scores_codex":[0.9994344,0.0001304843,0.00003573264,0.0001849512,0.0001198338,0.00009452947],"domain_scores_gemma":[0.9986743,0.0005751416,0.0003215147,0.00009786633,0.00008586609,0.0002452995],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004788769,0.0004184244,0.8741286,0.0002002416,0.002579919,0.007530131,0.0004544131,0.000967065,0.06733706,0.0007940732,0.004758559,0.03604264],"study_design_scores_gemma":[0.0002872169,0.0003179102,0.9850786,0.00004202051,0.001016747,0.004501348,0.000143251,0.0009603417,0.004208002,0.0005392749,0.002879038,0.00002630469],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917862,0.001770742,0.002657195,0.0007432963,0.00006109838,0.00003990082,0.001328299,0.00009331016,0.001519905],"genre_scores_gemma":[0.9958852,0.0004934177,0.001486569,0.0001630347,0.00003436275,0.00003207395,0.0009629835,0.00001887857,0.0009234622],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007332632,"threshold_uncertainty_score":0.01749814,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3100629716","doi":"10.1200/jco.20.02672","title":"Systemic Therapy for Advanced Hepatocellular Carcinoma: ASCO Guideline","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":614,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Medicine; Lenvatinib; Sorafenib; Atezolizumab; Nivolumab; Regorafenib; Ramucirumab; Oncology; Bevacizumab; Internal medicine; Pembrolizumab; Hepatocellular carcinoma; Population; Cabozantinib; Cancer; Colorectal cancer; Chemotherapy; Immunotherapy","authors":[{"name":"John D. Gordan","is_ca":false},{"name":"Erin B. Kennedy","is_ca":false},{"name":"Ghassan K. Abou‐Alfa","is_ca":false},{"name":"Muhammad Shaalan Beg","is_ca":false},{"name":"Steven T. Brower","is_ca":false},{"name":"T. Gade","is_ca":false},{"name":"Laura W. Goff","is_ca":false},{"name":"Shilpi Gupta","is_ca":false},{"name":"Jennifer Guy","is_ca":false},{"name":"William Proctor Harris","is_ca":false},{"name":"Renuka Iyer","is_ca":false},{"name":"Ishmael Jaiyesimi","is_ca":false},{"name":"Minaxi Jhawer","is_ca":false},{"name":"Asha Karippot","is_ca":false},{"name":"Ahmed O. Kaseb","is_ca":false},{"name":"Robin Kate Kelley","is_ca":false},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Jeremy Kortmansky","is_ca":false},{"name":"Andrea Leaf","is_ca":false},{"name":"William Remak","is_ca":false},{"name":"Rachna T. Shroff","is_ca":false},{"name":"Davendra Sohal","is_ca":false},{"name":"Tamar H. Taddei","is_ca":false},{"name":"Neeta K. Venepalli","is_ca":false},{"name":"Andrea Wilson","is_ca":false},{"name":"Andrew X. Zhu","is_ca":false},{"name":"Michal G. Rose","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2489958274625802,"gpt":0.5172099093082254,"spread":0.2682140818456452,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01072096,0.001794063,0.003064162,0.004130773,0.001229981,0.003018755,0.006198815,0.007553065,0.006088172],"category_scores_gemma":[0.02255164,0.0009095676,0.004096168,0.004450794,0.001225,0.002340931,0.00285332,0.008125608,0.007149335],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005816407,"about_ca_system_score_gemma":0.02356834,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02115037,"about_ca_topic_score_gemma":0.02651194,"domain_scores_codex":[0.9892617,0.00394944,0.00331167,0.000479437,0.002514471,0.0004831921],"domain_scores_gemma":[0.9803708,0.003489392,0.003384082,0.0005213245,0.01062604,0.001608502],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007149646,0.0001108404,0.0009026608,0.009603721,0.00023583,0.0002690186,0.0001549054,0.001132932,0.0004104759,0.003699854,0.8393037,0.1441046],"study_design_scores_gemma":[0.0004193966,0.0001206043,0.002812781,0.05637416,0.000646645,0.0007301081,0.0001431425,0.0009666182,0.0003670216,0.006360196,0.9309829,0.00007626192],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"methods","genre_scores_codex":[0.002919458,0.3282182,0.03085261,0.4589448,0.02220753,0.01132822,0.02311666,0.00142244,0.1209902],"genre_scores_gemma":[0.02170268,0.3726757,0.1854429,0.2918765,0.01335761,0.01422347,0.05993531,0.0006151815,0.04017063],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.02115037,"threshold_uncertainty_score":0.0566985,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3199725740","doi":"10.1016/j.cell.2021.08.023","title":"Proteogenomic characterization of pancreatic ductal adenocarcinoma","year":2021,"lang":"en","type":"article","venue":"Cell","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":599,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary; University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"National Institute of Environmental Health Sciences; National Cancer Institute; National Institutes of Health; Rolfe Pancreatic Cancer Foundation","keywords":"Biology; Proteogenomics; Computational biology; Proteomics; Exome sequencing; Carcinogenesis; Pancreatic cancer; microRNA; Cancer research; Adenocarcinoma; Cancer; Bioinformatics; Gene; Genome; Genomics; Genetics; Mutation","authors":[{"name":"Liwei Cao","is_ca":false},{"name":"Chen Huang","is_ca":false},{"name":"Daniel Cui Zhou","is_ca":false},{"name":"Yingwei Hu","is_ca":false},{"name":"T. Mamie Lih","is_ca":false},{"name":"Sara R. Savage","is_ca":false},{"name":"Karsten Krug","is_ca":false},{"name":"David Clark","is_ca":false},{"name":"Michael Schnaubelt","is_ca":false},{"name":"Lijun Chen","is_ca":false},{"name":"Felipe da Veiga Leprevost","is_ca":false},{"name":"Rodrigo Vargas Eguez","is_ca":false},{"name":"Weiming Yang","is_ca":false},{"name":"Jianbo Pan","is_ca":false},{"name":"Bo Wen","is_ca":false},{"name":"Yongchao Dou","is_ca":false},{"name":"Wen Jiang","is_ca":false},{"name":"Yuxing Liao","is_ca":false},{"name":"Zhiao Shi","is_ca":false},{"name":"Nadezhda V. Terekhanova","is_ca":false},{"name":"Song Cao","is_ca":false},{"name":"Rita Jui-Hsien Lu","is_ca":false},{"name":"Yize Li","is_ca":false},{"name":"Ruiyang Liu","is_ca":false},{"name":"Houxiang Zhu","is_ca":false},{"name":"Peter Ronning","is_ca":false},{"name":"Yige Wu","is_ca":false},{"name":"Matthew A. Wyczalkowski","is_ca":false},{"name":"Hariharan Easwaran","is_ca":false},{"name":"Ludmila Danilova","is_ca":false},{"name":"Arvind Singh Mer","is_ca":true},{"name":"Seungyeul Yoo","is_ca":false},{"name":"Joshua M. Wang","is_ca":false},{"name":"Wenke Liu","is_ca":false},{"name":"Benjamin Haibe‐Kains","is_ca":true},{"name":"Mathangi Thiagarajan","is_ca":false},{"name":"Scott D. Jewell","is_ca":false},{"name":"Galen Hostetter","is_ca":false},{"name":"Chelsea J. Newton","is_ca":false},{"name":"Qing Kay Li","is_ca":false},{"name":"Michael H. A. Roehrl","is_ca":false},{"name":"David Fenyö","is_ca":false},{"name":"Pei Wang","is_ca":false},{"name":"Alexey I. Nesvizhskii","is_ca":false},{"name":"D.R. Mani","is_ca":false},{"name":"Gilbert S. Omenn","is_ca":false},{"name":"Emily S. Boja","is_ca":false},{"name":"Mehdi Mesri","is_ca":false},{"name":"Ana I. Robles","is_ca":false},{"name":"Henry Rodriguez","is_ca":false},{"name":"Oliver F. Bathe","is_ca":true},{"name":"Daniel W. Chan","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Li Ding","is_ca":false},{"name":"Bing Zhang","is_ca":false},{"name":"Hui Zhang","is_ca":false},{"name":"Mitual Amin","is_ca":true},{"name":"Eunkyung An","is_ca":false},{"name":"Christina Ayad","is_ca":false},{"name":"Thomas Bauer","is_ca":false},{"name":"Chet Birger","is_ca":false},{"name":"Michael J. Birrer","is_ca":false},{"name":"Simina M. Boca","is_ca":false},{"name":"William Bocik","is_ca":false},{"name":"Melissa Borucki","is_ca":false},{"name":"Shuang Cai","is_ca":false},{"name":"Steven A. Carr","is_ca":false},{"name":"Sandra Cerda","is_ca":false},{"name":"Huan Chen","is_ca":false},{"name":"Steven Chen","is_ca":false},{"name":"David Chesla","is_ca":false},{"name":"Arul M. Chinnaiyan","is_ca":false},{"name":"Antonio Colaprico","is_ca":false},{"name":"Sandra Cottingham","is_ca":false},{"name":"Magdalena Derejska","is_ca":false},{"name":"Saravana M. Dhanasekaran","is_ca":false},{"name":"Marcin J. Domagalski","is_ca":false},{"name":"Brian Druker","is_ca":false},{"name":"Elizabeth R. Duffy","is_ca":false},{"name":"Maureen A. Dyer","is_ca":false},{"name":"Nathan Edwards","is_ca":false},{"name":"Matthew J. Ellis","is_ca":false},{"name":"Jennifer Eschbacher","is_ca":false},{"name":"Alicia Francis","is_ca":false},{"name":"Jesse Francis","is_ca":false},{"name":"Stacey Gabriel","is_ca":false},{"name":"N Gabrovski","is_ca":false},{"name":"Johanna Gardner","is_ca":false},{"name":"Gad Getz","is_ca":false},{"name":"Michael A. Gillette","is_ca":false},{"name":"Charles A. Goldthwaite","is_ca":false},{"name":"Pamela Grady","is_ca":false},{"name":"Shuai Guo","is_ca":false},{"name":"Pushpa Hariharan","is_ca":false},{"name":"Tara Hiltke","is_ca":false},{"name":"Barbara Hindenach","is_ca":false},{"name":"Katherine A. Hoadley","is_ca":false},{"name":"Jasmine Huang","is_ca":false},{"name":"Corbin D. Jones","is_ca":false},{"name":"Karen A. Ketchum","is_ca":false},{"name":"Christopher R. Kinsinger","is_ca":false},{"name":"Jennifer M. Koziak","is_ca":false},{"name":"Katarzyna Kuśnierz","is_ca":false},{"name":"Tao Liu","is_ca":false},{"name":"Jiang Long","is_ca":false},{"name":"David Mallery","is_ca":false},{"name":"Sailaja Mareedu","is_ca":false},{"name":"Ronald Matteotti","is_ca":false},{"name":"Nicollette Maunganidze","is_ca":false},{"name":"Peter B. McGarvey","is_ca":false},{"name":"Parham Minoo","is_ca":false},{"name":"Oxana Paklina","is_ca":false},{"name":"Amanda G. Paulovich","is_ca":false},{"name":"Samuel Payne","is_ca":false},{"name":"Olga Potapova","is_ca":false},{"name":"Barbara L. Pruetz","is_ca":false},{"name":"Liqun Qi","is_ca":false},{"name":"Nancy Roche","is_ca":false},{"name":"Karin Rodland","is_ca":false},{"name":"Daniel C. Rohrer","is_ca":false},{"name":"Eric E. Schadt","is_ca":false},{"name":"Shabunin Av","is_ca":false},{"name":"Troy Shelton","is_ca":false},{"name":"Yvonne Shutack","is_ca":false},{"name":"Shilpi Singh","is_ca":true},{"name":"Michael J. Smith","is_ca":false},{"name":"Richard Smith","is_ca":false},{"name":"Lori J. Sokoll","is_ca":false},{"name":"James Suh","is_ca":false},{"name":"Ratna R. Thangudu","is_ca":false},{"name":"Shirley Tsang","is_ca":false},{"name":"Ki Sung Um","is_ca":false},{"name":"Dana R. Valley","is_ca":false},{"name":"Negin Vatanian","is_ca":false},{"name":"Wenyi Wang","is_ca":false},{"name":"George D. Wilson","is_ca":false},{"name":"Maciej Wiznerowicz","is_ca":false},{"name":"Zhen Zhang","is_ca":false},{"name":"Grace Zhao","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02374331833610348,"gpt":0.2812574691186198,"spread":0.2575141507825163,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002347038,0.0003177895,0.0002680641,0.00153378,0.0002549804,0.0003618913,0.0001154081,0.0001524056,0.0004741196],"category_scores_gemma":[0.000289119,0.0001013647,0.0002767604,0.001007124,0.0001456276,0.0001636398,0.0003250681,0.0002423114,0.0001726608],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001473951,"about_ca_system_score_gemma":0.0002070945,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006248778,"about_ca_topic_score_gemma":0.0009000486,"domain_scores_codex":[0.999842,0.00002373814,0.00001332331,0.00003635623,0.00005570778,0.00002881286],"domain_scores_gemma":[0.9998759,0.00001793877,0.00002692811,0.00001506066,0.00004015062,0.00002396952],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000147435,0.00002573798,0.01030579,0.00008191083,0.00004983485,0.0001789283,0.00006528608,0.0003054566,0.9816861,0.00009208376,0.0001227268,0.006938598],"study_design_scores_gemma":[0.00001690064,0.0003627082,0.4858748,0.0000254061,0.0002209973,0.003416992,0.0004121806,0.01008993,0.4882768,0.000628592,0.01062705,0.00004762285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9887465,0.001450372,0.005562709,0.00008535516,0.00001302807,0.00004895181,0.003017779,0.00007451543,0.001000659],"genre_scores_gemma":[0.9764223,0.001710941,0.01308675,0.00009109052,0.00001885584,0.00008100708,0.007316116,0.00004159358,0.001231409],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00153378,"threshold_uncertainty_score":0.00158608,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2000085538","doi":"10.1001/jama.2012.7352","title":"Effect of Adjuvant Chemotherapy With Fluorouracil Plus Folinic Acid or Gemcitabine vs Observation on Survival in Patients With Resected Periampullary Adenocarcinoma","year":2012,"lang":"en","type":"article","venue":"JAMA","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":592,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Institute for Health and Care Research; Cancer Research UK","keywords":"Medicine; Folinic acid; Gemcitabine; Chemotherapy; Fluorouracil; Pancreatic cancer; Internal medicine; Gastroenterology; Adenocarcinoma; Periampullary cancer; Surgery; Cancer","authors":[{"name":"John P. Neoptolemos","is_ca":false},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Trevor F. Cox","is_ca":false},{"name":"Juan W. Valle","is_ca":false},{"name":"Daniel H. Palmer","is_ca":false},{"name":"Ross Carter","is_ca":false},{"name":"Niall C. Tebbutt","is_ca":false},{"name":"David Smith","is_ca":false},{"name":"Bengt Glimelius","is_ca":false},{"name":"Richard Charnley","is_ca":false},{"name":"F Lacaine","is_ca":false},{"name":"Andrew Scarfe","is_ca":false},{"name":"Alan Anthoney","is_ca":false},{"name":"Paula Ghaneh","is_ca":false},{"name":"Christopher Halloran","is_ca":false},{"name":"Markus M. Lerch","is_ca":false},{"name":"Attila Oláh","is_ca":false},{"name":"Charlotte Rawcliffe","is_ca":false},{"name":"Caroline S. Verbeke","is_ca":false},{"name":"Fiona Campbell","is_ca":false},{"name":"Markus W. Büchler","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02626694571328314,"gpt":0.3106259363977092,"spread":0.284358990684426,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001215772,0.0004255624,0.001150454,0.0002368533,0.0002608616,0.0003648416,0.0002344528,0.0005347693,0.001206639],"category_scores_gemma":[0.002246174,0.00018618,0.001141743,0.000265397,0.0004313777,0.0004147494,0.000263456,0.0008218345,0.0000908918],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004918109,"about_ca_system_score_gemma":0.0006454791,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007311908,"about_ca_topic_score_gemma":0.001711936,"domain_scores_codex":[0.9995678,0.0002486795,0.00004294038,0.00005420786,0.00003117495,0.00005514002],"domain_scores_gemma":[0.9988458,0.0005229927,0.000273664,0.0000562168,0.00002886447,0.0002724555],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","study_design_scores_codex":[0.9047466,0.005396674,0.04002872,0.0004642967,0.001233241,0.000115018,0.0001041224,0.0008895503,0.002144528,0.00004844154,0.0003490882,0.0444797],"study_design_scores_gemma":[0.3170438,0.4690152,0.2039796,0.0001830747,0.003657495,0.000469637,0.0001579364,0.002337198,0.001601959,0.0002974815,0.001217674,0.00003897077],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997488,0.002084056,0.00005325305,0.00008605101,0.00003363231,0.00005074313,0.00004087658,0.000004281152,0.0001590082],"genre_scores_gemma":[0.9987453,0.0007700897,0.00009972717,0.00008822515,0.00005595255,0.00007075547,0.00009547887,7.644853e-7,0.00007356886],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001215772,"threshold_uncertainty_score":0.006429672,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2154574630","doi":"10.1200/jco.2004.12.082","title":"Irinotecan Plus Gemcitabine Results in No Survival Advantage Compared With Gemcitabine Monotherapy in Patients With Locally Advanced or Metastatic Pancreatic Cancer Despite Increased Tumor Response Rate","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":586,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Medicine; Gemcitabine; Irinotecan; Internal medicine; Clinical endpoint; Pancreatic cancer; Gastroenterology; Population; Phases of clinical research; Progression-free survival; Chemotherapy; Oncology; Cancer; Surgery; Randomized controlled trial; Colorectal cancer","authors":[{"name":"Caio M. Rocha Lima","is_ca":true},{"name":"Mark R. Green","is_ca":true},{"name":"Robert Rotche","is_ca":true},{"name":"Wilson H. Miller","is_ca":true},{"name":"G. Mark Jeffrey","is_ca":true},{"name":"Laura A. Cisar","is_ca":true},{"name":"A. Morganti","is_ca":true},{"name":"Nicoletta Orlando","is_ca":true},{"name":"G. Gruia","is_ca":true},{"name":"Langdon L. Miller","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07414236306649465,"gpt":0.4405057419288173,"spread":0.3663633788623226,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001284315,0.0004881679,0.001462628,0.0002280287,0.0001487485,0.0005222858,0.0003129549,0.0004211556,0.001900884],"category_scores_gemma":[0.0009072968,0.0002089881,0.001002297,0.0002781938,0.0004065157,0.000474869,0.0001885352,0.00130696,0.0002228487],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004486925,"about_ca_system_score_gemma":0.0005241988,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002415285,"about_ca_topic_score_gemma":0.0008299265,"domain_scores_codex":[0.9995387,0.0002668104,0.00003118807,0.00007515024,0.00004664605,0.00004164408],"domain_scores_gemma":[0.9993338,0.0001991879,0.0002199542,0.00004379109,0.00002458768,0.0001787937],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.8044094,0.01010686,0.01059701,0.0008230092,0.002631299,0.0001839717,0.0001182836,0.001981687,0.0281662,0.000126058,0.001058898,0.1397972],"study_design_scores_gemma":[0.2959182,0.6329963,0.05406457,0.0001150916,0.00306175,0.0006343868,0.00009695898,0.003075436,0.00720335,0.0002981923,0.002495938,0.00003973971],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959339,0.003035373,0.0001427182,0.0001899266,0.00005984211,0.000100103,0.00006184571,0.0000251399,0.0004511749],"genre_scores_gemma":[0.9978774,0.001084814,0.0002656295,0.0001973751,0.00009683321,0.0000642079,0.0001215396,0.000006041828,0.0002861613],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001900884,"threshold_uncertainty_score":0.006792188,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2531887049","doi":"10.1038/nature19823","title":"A renewed model of pancreatic cancer evolution based on genomic rearrangement patterns","year":2016,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":547,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; McGill University Health Centre; Sunnybrook Health Science Centre; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Health Sciences Centre; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; Ontario Ministry of Research and Innovation; Hebrew University of Jerusalem; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Hospital for Sick Children; Wellcome Trust","keywords":"Pancreatic cancer; Carcinogenesis; CDKN2A; Biology; Lineage (genetic); Cancer; Cancer research; Chromothripsis; Pancreatic Intraepithelial Neoplasia; KRAS; Somatic evolution in cancer; Mutation; Genetics; Genome instability; Gene; DNA; DNA damage","authors":[{"name":"Faiyaz Notta","is_ca":true},{"name":"Michelle Chan‐Seng‐Yue","is_ca":true},{"name":"Mathieu Lemire","is_ca":true},{"name":"Yilong Li","is_ca":false},{"name":"Gavin W. Wilson","is_ca":true},{"name":"Ashton A. Connor","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Sheng-Ben Liang","is_ca":true},{"name":"Andrew Brown","is_ca":true},{"name":"Jaeseung Kim","is_ca":true},{"name":"Tao Wang","is_ca":true},{"name":"Jared T. Simpson","is_ca":true},{"name":"Timothy Beck","is_ca":true},{"name":"Ayelet Borgida","is_ca":false},{"name":"Nicholas Buchner","is_ca":true},{"name":"Dianne Chadwick","is_ca":true},{"name":"Sara Hafezi‐Bakhtiari","is_ca":true},{"name":"John E. Dick","is_ca":true},{"name":"Lawrence E. Heisler","is_ca":true},{"name":"Michael A. Hollingsworth","is_ca":false},{"name":"Emin Ibrahimov","is_ca":true},{"name":"Gun Ho Jang","is_ca":true},{"name":"Jeremy Johns","is_ca":true},{"name":"Lars Jorgensen","is_ca":true},{"name":"Calvin Law","is_ca":true},{"name":"Olga Ludkovski","is_ca":true},{"name":"Ilinca M. Lungu","is_ca":true},{"name":"Karen Ng","is_ca":true},{"name":"Danielle Pasternack","is_ca":true},{"name":"Gloria M. Petersen","is_ca":false},{"name":"Liran I. Shlush","is_ca":true},{"name":"Lee E. Timms","is_ca":true},{"name":"Ming‐Sound Tsao","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Christina K. Yung","is_ca":true},{"name":"George Zogopoulos","is_ca":true},{"name":"John M.S. Bartlett","is_ca":true},{"name":"Ludmil B. Alexandrov","is_ca":false},{"name":"Francisco X. Real","is_ca":false},{"name":"Sean P. Cleary","is_ca":true},{"name":"Michael H. A. Roehrl","is_ca":true},{"name":"John D. McPherson","is_ca":true},{"name":"Lincoln Stein","is_ca":true},{"name":"Thomas J. Hudson","is_ca":true},{"name":"Peter J. Campbell","is_ca":false},{"name":"Steven Gallinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02722973348533786,"gpt":0.3378341852894211,"spread":0.3106044518040832,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001704963,0.0003544323,0.0006421504,0.001174699,0.0007160297,0.002679976,0.001343893,0.001899352,0.00478213],"category_scores_gemma":[0.004003317,0.0003215726,0.0006015484,0.0007863857,0.002692808,0.00519786,0.001262129,0.001597883,0.0008345494],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001217614,"about_ca_system_score_gemma":0.0007344062,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001527804,"about_ca_topic_score_gemma":0.001213456,"domain_scores_codex":[0.9991779,0.0002658876,0.00003499017,0.0003142546,0.0001129031,0.00009403725],"domain_scores_gemma":[0.9983597,0.0007357066,0.0002075079,0.0003400853,0.0001973725,0.0001595874],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","study_design_scores_codex":[0.000684155,0.0001345262,0.1148448,0.0006818674,0.0006016389,0.002601682,0.003897003,0.07855241,0.08497404,0.4782278,0.007580627,0.2272195],"study_design_scores_gemma":[0.00007361115,0.0005171053,0.062622,0.0002344792,0.0002593974,0.004182809,0.002457639,0.1493654,0.007479725,0.6986248,0.07396203,0.0002210455],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7271809,0.01112295,0.1711563,0.02929792,0.000723695,0.00007557793,0.001205802,0.0008764471,0.05836051],"genre_scores_gemma":[0.9727277,0.004304535,0.01507352,0.001948823,0.0004339001,0.00004408484,0.0003649727,0.0001624335,0.004940064],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00478213,"threshold_uncertainty_score":0.01599783,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2033295037","doi":"10.1016/j.clnu.2012.08.011","title":"Guidelines for perioperative care for pancreaticoduodenectomy: Enhanced Recovery After Surgery (ERAS®) Society recommendations","year":2012,"lang":"en","type":"article","venue":"Clinical Nutrition","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":545,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Perioperative; Pancreaticoduodenectomy; Protocol (science); MEDLINE; Randomized controlled trial; Evidence-based medicine; Evidence-based practice; Intensive care medicine; Surgery; Alternative medicine","authors":[{"name":"Kristoffer Lassen","is_ca":false},{"name":"Mariëlle M.E. Coolsen","is_ca":false},{"name":"K. Slim","is_ca":false},{"name":"Francesco Carli","is_ca":true},{"name":"José Eduardo de Aguilar‐Nascimento","is_ca":false},{"name":"Markus Schäfer","is_ca":false},{"name":"Rowan W. Parks","is_ca":false},{"name":"Kenneth C. H. Fearon","is_ca":false},{"name":"Dileep N. Lobo","is_ca":false},{"name":"Nicolas Demartines","is_ca":false},{"name":"Marco Braga","is_ca":false},{"name":"Olle Ljungqvist","is_ca":false},{"name":"Cornelis H.C. Dejong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2306224302429168,"gpt":0.5096496631958662,"spread":0.2790272329529495,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01472765,0.001612804,0.001760817,0.004050129,0.002307266,0.002756427,0.00464513,0.01373,0.006515091],"category_scores_gemma":[0.03655555,0.001073797,0.003641266,0.003146157,0.001579653,0.002002075,0.004148999,0.01440664,0.004219882],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004315983,"about_ca_system_score_gemma":0.03472618,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01960186,"about_ca_topic_score_gemma":0.04321006,"domain_scores_codex":[0.9852196,0.003770328,0.004360771,0.000558397,0.004734647,0.001356195],"domain_scores_gemma":[0.943943,0.009027512,0.007990926,0.0009158746,0.0320756,0.006046955],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008455381,0.0006298504,0.003444236,0.001721064,0.0001281478,0.0006832569,0.0003497819,0.001035515,0.0006310291,0.003675844,0.809065,0.1785516],"study_design_scores_gemma":[0.0004096016,0.0002658502,0.01419197,0.01734691,0.0004040397,0.001409645,0.0009687741,0.0008682618,0.0008531914,0.006914545,0.9562088,0.0001584592],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"other","genre_scores_codex":[0.004784575,0.07355946,0.0191277,0.7948304,0.03154684,0.001921495,0.002067261,0.001179241,0.07098293],"genre_scores_gemma":[0.03880066,0.1345646,0.3127855,0.4181141,0.02096593,0.009774618,0.009457535,0.0005393816,0.05499785],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.01960186,"threshold_uncertainty_score":0.07788819,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1563283949","doi":"10.1002/cncr.29161","title":"Phase 2 multi‐institutional trial evaluating gemcitabine and stereotactic body radiotherapy for patients with locally advanced unresectable pancreatic adenocarcinoma","year":2014,"lang":"en","type":"article","venue":"Cancer","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":538,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Cancer Institute; Alexander Family Foundation; McKnight Foundation","keywords":"Medicine; Gemcitabine; Common Terminology Criteria for Adverse Events; Pancreatic cancer; Clinical endpoint; Adverse effect; Radiation therapy; Toxicity; Internal medicine; Quality of life (healthcare); Adenocarcinoma; Radiosurgery; Clinical trial; Cancer; Radiology; Gastroenterology","authors":[{"name":"Joseph M. Herman","is_ca":false},{"name":"Daniel T. Chang","is_ca":false},{"name":"Karyn A. Goodman","is_ca":false},{"name":"Avani Satish Dholakia","is_ca":false},{"name":"Siva P. Raman","is_ca":false},{"name":"Amy Hacker‐Prietz","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"M. Griffith","is_ca":false},{"name":"Timothy M. Pawlik","is_ca":false},{"name":"Jonathan Pai","is_ca":false},{"name":"Eileen M. O’Reilly","is_ca":false},{"name":"George A. Fisher","is_ca":false},{"name":"Aaron T. Wild","is_ca":false},{"name":"Lauren M. Rosati","is_ca":false},{"name":"Lei Zheng","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Daniel A. Laheru","is_ca":false},{"name":"Laurie Ann Columbo","is_ca":false},{"name":"Elizabeth A. Sugar","is_ca":false},{"name":"Albert C. Koong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04441011237090429,"gpt":0.4011181487900463,"spread":0.3567080364191419,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00288698,0.001714248,0.001800173,0.0004778265,0.0004843338,0.0009999936,0.001300797,0.001186622,0.003865776],"category_scores_gemma":[0.001341781,0.0006442905,0.001548597,0.0005887221,0.0009790284,0.000851609,0.0006791578,0.003800842,0.0006923355],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001177946,"about_ca_system_score_gemma":0.002205691,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007331378,"about_ca_topic_score_gemma":0.002012032,"domain_scores_codex":[0.9992045,0.0005106698,0.00004069047,0.0001013388,0.00005368668,0.00008904702],"domain_scores_gemma":[0.998818,0.0001994789,0.000328171,0.0001164136,0.00006255899,0.000475444],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.8514559,0.08297132,0.007685233,0.0005847677,0.001295053,0.0001481385,0.0001970289,0.002413647,0.01191002,0.0001127341,0.001414298,0.03981202],"study_design_scores_gemma":[0.6782725,0.3105162,0.007497299,0.00002815142,0.0003681952,0.0001303772,0.00004267705,0.0006793982,0.001351622,0.00007176505,0.001025803,0.00001595561],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945387,0.001094182,0.0003410943,0.0002879585,0.00007560266,0.002577601,0.0003617014,0.00004691116,0.0006761872],"genre_scores_gemma":[0.9861625,0.001458046,0.002128785,0.000704199,0.0002164198,0.006100112,0.00177416,0.00002799608,0.001427726],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003865776,"threshold_uncertainty_score":0.01526797,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3118238647","doi":"10.1101/gr.257246.119","title":"Accurate and efficient detection of gene fusions from RNA sequencing data","year":2021,"lang":"en","type":"article","venue":"Genome Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":524,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Heidelberger Zentrum für Personalisierte Onkologie Deutsches Krebsforschungszentrum In Der Helmholtz-Gemeinschaft; Nationales Centrum für Tumorerkrankungen Heidelberg; Ontario Institute for Cancer Research; Government of Ontario; Deutsches Krebsforschungszentrum","keywords":"KRAS; Biology; Fusion gene; ROS1; Computational biology; Druggability; Gene; Cancer; Identification (biology); Cancer research; Bioinformatics; Mutation; Genetics; Adenocarcinoma","authors":[{"name":"Sebastian Uhrig","is_ca":false},{"name":"Julia Ellermann","is_ca":false},{"name":"Tatjana Walther","is_ca":false},{"name":"Pauline Burkhardt","is_ca":false},{"name":"Martina Fröhlich","is_ca":false},{"name":"Barbara Hutter","is_ca":false},{"name":"Umut H. Toprak","is_ca":false},{"name":"Olaf Neumann","is_ca":false},{"name":"Albrecht Stenzinger","is_ca":false},{"name":"Claudia Scholl","is_ca":false},{"name":"Stefan Fröhling","is_ca":false},{"name":"Benedikt Brors","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.266035831030826,"gpt":0.449513237461834,"spread":0.183477406431008,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003298565,0.00121375,0.0009222953,0.002787884,0.0006479686,0.001751184,0.0008376673,0.001026013,0.001258966],"category_scores_gemma":[0.00926011,0.0006396195,0.000871888,0.00146294,0.0004902745,0.001151883,0.001009384,0.00153735,0.001820755],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005976668,"about_ca_system_score_gemma":0.001058582,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001512538,"about_ca_topic_score_gemma":0.00367876,"domain_scores_codex":[0.9977591,0.0004919032,0.000168278,0.0007562136,0.0006847749,0.0001397067],"domain_scores_gemma":[0.9957699,0.0026229,0.0004945215,0.0004033021,0.000585425,0.0001238391],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008458012,0.0002352653,0.02179601,0.0006112329,0.0004603995,0.0004872533,0.000335757,0.04007957,0.5986369,0.002988442,0.008597013,0.3249263],"study_design_scores_gemma":[0.00009157632,0.0002191426,0.01362323,0.00005105304,0.0000862419,0.0006588027,0.0002016016,0.7468864,0.2184435,0.007354302,0.01228137,0.0001028345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.1198829,0.001296387,0.8562514,0.0004113771,0.00009766682,0.0002623714,0.003431637,0.0169434,0.001422774],"genre_scores_gemma":[0.2327395,0.0005163419,0.7584484,0.0002019969,0.00005779448,0.0002611203,0.005806461,0.0006704625,0.00129796],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.003298565,"threshold_uncertainty_score":0.01744467,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2031505107","doi":"10.1038/bjc.2014.215","title":"Oncogenic KRAS signalling in pancreatic cancer","year":2014,"lang":"en","type":"review","venue":"British Journal of Cancer","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":501,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Deutschen Konsortium für Translationale Krebsforschung; Partenariat Canadien Contre Le Cancer; Deutsche Krebshilfe; Deutsche Forschungsgemeinschaft","keywords":"KRAS; Pancreatic cancer; Context (archaeology); Druggability; Cancer research; Cancer; Biology; Pancreatic Intraepithelial Neoplasia; Effector; Medicine; Bioinformatics; Oncology; Internal medicine; Colorectal cancer; Immunology; Gene; Genetics","authors":[{"name":"Serap EŞER","is_ca":false},{"name":"Angelika Schnieke","is_ca":false},{"name":"Günter Schneider","is_ca":false},{"name":"Dieter Saur","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06952848065448751,"gpt":0.4345967426747374,"spread":0.3650682620202499,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004180534,0.0006363094,0.001004425,0.002332944,0.0002640213,0.0008383348,0.0006215755,0.0008358582,0.003226009],"category_scores_gemma":[0.000501658,0.0002651299,0.0003943461,0.002190274,0.0003543566,0.0008761348,0.0006397213,0.00132511,0.002916346],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006682573,"about_ca_system_score_gemma":0.001031201,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001093745,"about_ca_topic_score_gemma":0.001915619,"domain_scores_codex":[0.9998436,0.00002163082,0.00002441132,0.00002373396,0.00006854498,0.00001798641],"domain_scores_gemma":[0.9998108,0.00006234062,0.00003133279,0.000005863757,0.00006375871,0.00002591129],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001047713,0.0000565236,0.0002113883,0.013311,0.00007344055,0.0002334639,0.00004496478,0.0002726343,0.001887802,0.00176619,0.03241991,0.9496179],"study_design_scores_gemma":[0.00001791729,0.0000813931,0.0009567066,0.002941704,0.00009120673,0.001680945,0.00004689962,0.00005786201,0.0005921841,0.00119515,0.9923218,0.00001623765],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00009839493,0.9989032,0.00003945781,0.0001779392,0.0001268716,0.00000222807,0.00001238661,0.000005632389,0.0006338762],"genre_scores_gemma":[0.0004532447,0.9989175,0.00004852606,0.0000791127,0.00007156902,0.000002171931,0.00001760562,6.874767e-7,0.000409651],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.003226009,"threshold_uncertainty_score":0.01079208,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2146542392","doi":"10.1158/2159-8290.cd-11-0194","title":"<i>ATM</i> Mutations in Patients with Hereditary Pancreatic Cancer","year":2011,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":489,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network","funders":"National Cancer Institute","keywords":"Pancreatic cancer; Cancer; Genetics; Biology; Adenocarcinoma; Exome sequencing; Exome; Mutation; Cancer research; Gene; Medicine","authors":[{"name":"Nicholas J. Roberts","is_ca":true},{"name":"Yuchen Jiao","is_ca":true},{"name":"Jun Yu","is_ca":true},{"name":"Levy Kopelovich","is_ca":true},{"name":"Gloria M. Petersen","is_ca":true},{"name":"Melissa L. Bondy","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Ann G. Schwartz","is_ca":true},{"name":"Sapna Syngal","is_ca":true},{"name":"Michele L. Coté","is_ca":true},{"name":"Jennifer E. Axilbund","is_ca":true},{"name":"Richard D. Schulick","is_ca":true},{"name":"Syed Z. Ali","is_ca":true},{"name":"James R. Eshleman","is_ca":true},{"name":"Victor E. Velculescu","is_ca":true},{"name":"Michael Goggins","is_ca":true},{"name":"Bert Vogelstein","is_ca":true},{"name":"Nickolas Papadopoulos","is_ca":true},{"name":"Ralph H. Hruban","is_ca":true},{"name":"Kenneth W. Kinzler","is_ca":true},{"name":"Alison P. Klein","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03231327219858047,"gpt":0.310225705989058,"spread":0.2779124337904775,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002622558,0.0003258298,0.0002190225,0.0006415748,0.0003882463,0.0003489098,0.0002006891,0.0004122783,0.002053282],"category_scores_gemma":[0.001243948,0.0001097054,0.0001192748,0.0007381535,0.0003012246,0.0002739164,0.0002406319,0.0002707994,0.000260499],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001673935,"about_ca_system_score_gemma":0.0001697307,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006500572,"about_ca_topic_score_gemma":0.0006462713,"domain_scores_codex":[0.9998534,0.00003154061,0.00001995698,0.00004818403,0.00002574888,0.00002126432],"domain_scores_gemma":[0.9995456,0.0001317778,0.000208698,0.00001910626,0.00003387743,0.00006101434],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003094525,0.00003074524,0.9796719,0.00004965298,0.00004090677,0.004324401,0.0001076558,0.0001664394,0.00522944,0.00007217531,0.0006371159,0.009360217],"study_design_scores_gemma":[0.00002230906,0.0002000541,0.9541286,0.00003000455,0.000109599,0.03975022,0.0002034478,0.0005773286,0.003349298,0.0002409629,0.00137797,0.00001020518],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972329,0.00100687,0.000217767,0.0001146857,0.00001211711,0.000006641453,0.000244593,0.00003098583,0.001133568],"genre_scores_gemma":[0.9992417,0.0002501044,0.0002578141,0.00003370371,0.00001621876,0.000002869184,0.0001201383,0.00000326788,0.00007424705],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002053282,"threshold_uncertainty_score":0.006868958,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1977483924","doi":"10.1007/s00268-012-1771-1","title":"Guidelines for Perioperative Care for Pancreaticoduodenectomy: Enhanced Recovery After Surgery (ERAS<sup>®</sup>) Society Recommendations","year":2012,"lang":"en","type":"article","venue":"World Journal of Surgery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":471,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Perioperative; Protocol (science); Pancreaticoduodenectomy; Vascular surgery; Evidence-based medicine; Randomized controlled trial; Abdominal surgery; MEDLINE; Evidence-based practice; Cardiothoracic surgery; Intensive care medicine; Surgery; General surgery; Cardiac surgery; Alternative medicine","authors":[{"name":"Kristoffer Lassen","is_ca":false},{"name":"Mariëlle M.E. Coolsen","is_ca":false},{"name":"K. Slim","is_ca":false},{"name":"Francesco Carli","is_ca":true},{"name":"José Eduardo de Aguilar‐Nascimento","is_ca":false},{"name":"Markus Schäfer","is_ca":false},{"name":"Rowan W. Parks","is_ca":false},{"name":"Kenneth C. H. Fearon","is_ca":false},{"name":"Dileep N. Lobo","is_ca":false},{"name":"Nicolas Demartines","is_ca":false},{"name":"Marco Braga","is_ca":false},{"name":"Olle Ljungqvist","is_ca":false},{"name":"Cornelis H.C. Dejong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1235019000746652,"gpt":0.400795106893434,"spread":0.2772932068187688,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02749061,0.002491158,0.00306058,0.01076207,0.001674262,0.003853003,0.008040559,0.01183591,0.009731691],"category_scores_gemma":[0.06644961,0.001323921,0.006819545,0.007502982,0.001765086,0.003208858,0.004080127,0.0101375,0.006118233],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.007809912,"about_ca_system_score_gemma":0.04967729,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02500315,"about_ca_topic_score_gemma":0.02727709,"domain_scores_codex":[0.9705955,0.00891809,0.01131777,0.0007788141,0.007088922,0.001300856],"domain_scores_gemma":[0.9237708,0.0193378,0.01092391,0.001494906,0.04095606,0.003516452],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001784174,0.000381776,0.001817674,0.03735566,0.000582917,0.0004590142,0.0007693366,0.00218371,0.000696035,0.008530228,0.6569917,0.2900535],"study_design_scores_gemma":[0.0006243343,0.0002372668,0.006919021,0.1606889,0.002067382,0.0008262941,0.001101645,0.001117115,0.0006479042,0.01388743,0.8116677,0.0002149484],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"methods","genre_scores_codex":[0.004232296,0.2786947,0.04909221,0.5378076,0.03857474,0.02034996,0.01641638,0.00158234,0.05324982],"genre_scores_gemma":[0.02010691,0.2794561,0.514347,0.1042899,0.006470611,0.02601364,0.0243852,0.0003432565,0.02458739],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.02749061,"threshold_uncertainty_score":0.145386,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4312094134","doi":"10.1056/nejmoa2208470","title":"Sotorasib in <i>KRAS</i> p.G12C–Mutated Advanced Pancreatic Cancer","year":2022,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":468,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Cancer Care Ontario","funders":"Sheikh Khalifa Bin Zayed Al Nahyan Institute for Personalized Cancer Therapy; National Center for Advancing Translational Sciences; National Cancer Institute; Memorial Sloan-Kettering Cancer Center; Cancer Prevention and Research Institute of Texas; Amgen","keywords":"KRAS; Pancreatic cancer; Medicine; Mutation; Pancreas; Cancer; Cancer research; Internal medicine; Biology; Genetics; Colorectal cancer; Gene","authors":[{"name":"John H. Strickler","is_ca":false},{"name":"Hironaga Satake","is_ca":false},{"name":"Thomas J. George","is_ca":false},{"name":"Rona Yaeger","is_ca":false},{"name":"Antoine Hollebecque","is_ca":false},{"name":"Ignacio Garrido‐Laguna","is_ca":false},{"name":"Martin Schüler","is_ca":false},{"name":"Timothy F. Burns","is_ca":false},{"name":"Andrew L. Coveler","is_ca":false},{"name":"Gerald S. Falchook","is_ca":false},{"name":"Mark Vincent","is_ca":true},{"name":"Yu Sunakawa","is_ca":false},{"name":"Laëtitia Dahan","is_ca":false},{"name":"David L. Bajor","is_ca":false},{"name":"Sun Young Rha","is_ca":false},{"name":"Charlotte Lemech","is_ca":false},{"name":"Dejan Juric","is_ca":false},{"name":"Marko Rehn","is_ca":false},{"name":"Gataree Ngarmchamnanrith","is_ca":false},{"name":"Pegah Jafarinasabian","is_ca":false},{"name":"Qui Tran","is_ca":false},{"name":"David S. Hong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02978042101672789,"gpt":0.3606203463971002,"spread":0.3308399253803723,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001379288,0.0005429636,0.00124639,0.0004159959,0.0001546157,0.000483213,0.000285775,0.0004064218,0.001200729],"category_scores_gemma":[0.0009741283,0.0001647954,0.0008837512,0.0004435033,0.00030337,0.0004166821,0.0002443646,0.0009322322,0.0001954368],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005295767,"about_ca_system_score_gemma":0.0005436609,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000311052,"about_ca_topic_score_gemma":0.001114014,"domain_scores_codex":[0.9996172,0.0001999124,0.00004057759,0.00005167988,0.00005197545,0.00003858508],"domain_scores_gemma":[0.9995556,0.0001339842,0.0001418815,0.00003164011,0.00004096139,0.00009581769],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.2723548,0.005677687,0.03360936,0.003494154,0.008097134,0.001115927,0.0002941704,0.006187128,0.08026197,0.0005153003,0.007238651,0.5811538],"study_design_scores_gemma":[0.2033355,0.5183143,0.1752617,0.001202368,0.01398584,0.006090826,0.0003400285,0.006665322,0.037363,0.00135241,0.03597295,0.00011577],"study_design_candidate":"randomized_trial","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9658225,0.02925633,0.0009951023,0.0007690538,0.0001209824,0.0004485667,0.0003058866,0.00005532711,0.00222618],"genre_scores_gemma":[0.9859555,0.01117136,0.0008761393,0.0004695452,0.0001949814,0.0003191666,0.0005255422,0.00001450306,0.0004731403],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001379288,"threshold_uncertainty_score":0.007294416,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2015943054","doi":"10.1038/bjc.2014.418","title":"Overall survival and clinical characteristics of pancreatic cancer in BRCA mutation carriers","year":2014,"lang":"en","type":"article","venue":"British Journal of Cancer","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":438,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Medicine; Pancreatic cancer; Malignancy; BRCA mutation; Internal medicine; Oncology; Adenocarcinoma; Stage (stratigraphy); Cancer; Pancreatic ductal adenocarcinoma; Gastroenterology; Breast cancer; Biology","authors":[{"name":"Talia Golan","is_ca":false},{"name":"Zaheer Kanji","is_ca":true},{"name":"Ron Epelbaum","is_ca":false},{"name":"Nicholas Devaud","is_ca":true},{"name":"Efrat Dagan","is_ca":false},{"name":"Spring Holter","is_ca":true},{"name":"Dan Aderka","is_ca":false},{"name":"Shani Paluch–Shimon","is_ca":false},{"name":"Brett A. Kaufman","is_ca":false},{"name":"Ruth Gershoni‐Baruch","is_ca":false},{"name":"David W. Hedley","is_ca":true},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Eitan Friedman","is_ca":false},{"name":"Steven Gallinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0290428155288431,"gpt":0.3876839837172945,"spread":0.3586411681884514,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006917208,0.0002030259,0.0002970808,0.001308835,0.0002700874,0.0004989666,0.0002394593,0.0004516287,0.001622673],"category_scores_gemma":[0.002182689,0.0001562637,0.0003366288,0.0008521479,0.0002740167,0.0004616217,0.0004197093,0.0003144949,0.0002496842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002616996,"about_ca_system_score_gemma":0.0001732209,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001279643,"about_ca_topic_score_gemma":0.001049703,"domain_scores_codex":[0.9997718,0.00003966276,0.00003160252,0.0000729388,0.00003228624,0.00005178972],"domain_scores_gemma":[0.9989102,0.0002407971,0.0004645932,0.00003882197,0.00007148418,0.0002741563],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001790465,0.00001033473,0.9987305,0.00000426801,0.00001761385,0.0001149148,0.00002904664,0.00002881862,0.0001382748,0.000004015608,0.00003538303,0.0007078014],"study_design_scores_gemma":[0.000004637719,0.0001195251,0.998908,0.00000390594,0.00002241807,0.0006238603,0.0001095843,0.00007006458,0.00004014793,0.00001745586,0.00007829414,0.00000220565],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993933,0.0002340686,0.00001906288,0.00001462025,0.000001992497,0.000002379795,0.0001908395,0.000001553479,0.0001420814],"genre_scores_gemma":[0.9995202,0.00006598276,0.00002192476,0.000007369158,0.000004233628,0.000003565433,0.0003237951,8.434567e-7,0.00005193161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001622673,"threshold_uncertainty_score":0.005428374,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2926499479","doi":"10.1097/sla.0000000000003284","title":"Factors Predicting Response, Perioperative Outcomes, and Survival Following Total Neoadjuvant Therapy for Borderline/Locally Advanced Pancreatic Cancer","year":2019,"lang":"en","type":"article","venue":"Annals of Surgery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":437,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Pancreas Centre (Canada)","funders":"","keywords":"Medicine; Neoadjuvant therapy; Perioperative; Gemcitabine; Surgery; Chemotherapy; FOLFIRINOX; Regimen; Pancreatic cancer; Oncology; Internal medicine; Cancer; Irinotecan; Breast cancer; Colorectal cancer","authors":[{"name":"Mark J. Truty","is_ca":true},{"name":"Michael L. Kendrick","is_ca":true},{"name":"David M. Nagorney","is_ca":true},{"name":"Rory L. Smoot","is_ca":true},{"name":"Sean P. Cleary","is_ca":true},{"name":"Rondell P. Graham","is_ca":false},{"name":"Ajit H. Goenka","is_ca":false},{"name":"Christopher L. Hallemeier","is_ca":false},{"name":"Michel G. Haddock","is_ca":false},{"name":"William S. Harmsen","is_ca":false},{"name":"Amit Mahipal","is_ca":false},{"name":"Robert R. McWilliams","is_ca":false},{"name":"Þorvarður R. Hálfdánarson","is_ca":false},{"name":"Axel Grothey","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1736490358301666,"gpt":0.42568216562589,"spread":0.2520331297957234,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004051711,0.0001513897,0.0001597959,0.0003243406,0.0001447596,0.0002870116,0.0001359925,0.0001615039,0.0005526356],"category_scores_gemma":[0.001784959,0.00007083618,0.0002084289,0.0002978713,0.00019352,0.0002266865,0.0001827543,0.0002302985,0.0001172174],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001381953,"about_ca_system_score_gemma":0.0001995673,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004374324,"about_ca_topic_score_gemma":0.00094884,"domain_scores_codex":[0.9998212,0.00005941339,0.00003349984,0.00002463357,0.00003435479,0.00002688637],"domain_scores_gemma":[0.9990193,0.0002825501,0.0004426427,0.0000233381,0.00007037723,0.0001617842],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001294801,0.00001550528,0.997153,0.000008805328,0.00001277656,0.00009698955,0.00001845795,0.00008380756,0.0002620546,0.000002820344,0.00002980526,0.002186503],"study_design_scores_gemma":[0.000006277589,0.0002966438,0.9975433,0.00001046128,0.00002849586,0.00108954,0.0001518792,0.0005032478,0.0002190974,0.00001694377,0.0001315083,0.000002572816],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993911,0.0003150317,0.00008762366,0.00002585097,0.000002893963,0.000002878983,0.0000452866,0.000001999368,0.0001273263],"genre_scores_gemma":[0.9996732,0.00009524239,0.00006795413,0.000009360225,0.000006681328,0.000002696742,0.0001144405,7.157155e-7,0.00002968274],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005526356,"threshold_uncertainty_score":0.002142787,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2090755771","doi":"10.1053/j.gastro.2015.01.014","title":"American Gastroenterological Association Technical Review on the Diagnosis and Management of Asymptomatic Neoplastic Pancreatic Cysts","year":2015,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":430,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Hamilton Health Sciences","funders":"","keywords":"Asymptomatic; Medicine; Guideline; Internal medicine; Annals; Pancreatic cyst; Gastroenterology; Population; Pancreas; Pancreatic tumor; Scopus; Pancreatic cancer; MEDLINE; Pathology; Cancer","authors":[{"name":"James M. Scheiman","is_ca":false},{"name":"Joo Ha Hwang","is_ca":false},{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06536898869391007,"gpt":0.3822888818491789,"spread":0.3169198931552689,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008964236,0.0006837666,0.001625183,0.005482414,0.0002730362,0.001125477,0.0009596431,0.001041247,0.002575876],"category_scores_gemma":[0.002684142,0.0003321052,0.0008014849,0.003370484,0.0004967646,0.001493225,0.0008683549,0.001177738,0.001142563],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006501532,"about_ca_system_score_gemma":0.002023765,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001550461,"about_ca_topic_score_gemma":0.003345089,"domain_scores_codex":[0.9995283,0.0000713444,0.0001308126,0.00005631345,0.0001833327,0.0000298195],"domain_scores_gemma":[0.99866,0.000697165,0.0002665331,0.00002498953,0.0002773663,0.00007387049],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000641669,0.00004140896,0.0007233606,0.02759767,0.0001571201,0.0007439193,0.0000643284,0.0001798507,0.0007978426,0.0009912517,0.05435316,0.9142859],"study_design_scores_gemma":[0.00003650288,0.0001012564,0.003934296,0.02897324,0.0007937612,0.009777299,0.0001206571,0.0001203542,0.0004579341,0.001365862,0.954268,0.00005080655],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001080718,0.9985197,0.00007999599,0.0003701428,0.0002482492,0.000005253482,0.00002463739,0.000005838847,0.0006380419],"genre_scores_gemma":[0.0005905138,0.9982248,0.000195887,0.0003627942,0.0003633953,0.000004430361,0.00004460826,0.000001460906,0.000212203],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.005482414,"threshold_uncertainty_score":0.008617163,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3206996158","doi":"10.1016/j.cell.2021.09.022","title":"Spatially confined sub-tumor microenvironments in pancreatic cancer","year":2021,"lang":"en","type":"article","venue":"Cell","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":423,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ontario Institute for Cancer Research; University Health Network; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Occupational Cancer Research Centre; Princess Margaret Cancer Centre","funders":"","keywords":"Biology; Tumor microenvironment; Pancreatic cancer; Phenotype; Fibroblast; Cancer research; Tumor progression; Genetic heterogeneity; Immune system; Cancer-Associated Fibroblasts; Pancreatic tumor; Cancer; Immunology; Genetics; Cell culture; Gene","authors":[{"name":"Barbara T. Grünwald","is_ca":true},{"name":"Antoine Devisme","is_ca":false},{"name":"Geoffroy Andrieux","is_ca":false},{"name":"Foram Vyas","is_ca":true},{"name":"Kazeera Aliar","is_ca":true},{"name":"Curtis W. McCloskey","is_ca":true},{"name":"Andrew Macklin","is_ca":true},{"name":"Gun Ho Jang","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Joan Miguel Romero","is_ca":true},{"name":"Prashant Bavi","is_ca":true},{"name":"Peter Bronsert","is_ca":false},{"name":"Faiyaz Notta","is_ca":true},{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Laura Tamblyn","is_ca":true},{"name":"Molly L. Udaskin","is_ca":true},{"name":"Nikolina Radulovich","is_ca":true},{"name":"Sandra E. Fischer","is_ca":true},{"name":"Melanie Boerries","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"Thomas Kislinger","is_ca":true},{"name":"Rama Khokha","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02185218738619339,"gpt":0.3013799435676659,"spread":0.2795277561814725,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116019,0.0001035641,0.0001915772,0.0003365164,0.0004753458,0.0009314313,0.0002006673,0.0002528016,0.00126051],"category_scores_gemma":[0.0001478118,0.0001662939,0.0001056229,0.0003053955,0.0004432922,0.0006123902,0.0005412558,0.0003651788,0.0002327822],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006061008,"about_ca_system_score_gemma":0.0003453507,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001797984,"about_ca_topic_score_gemma":0.002565457,"domain_scores_codex":[0.9999001,0.00002057362,0.000003962544,0.00002524206,0.00002381657,0.00002627955],"domain_scores_gemma":[0.999913,0.00001756568,0.00002348827,0.0000110567,0.00001037256,0.00002449658],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009518604,0.0001135902,0.00956316,0.0003844369,0.00003923929,0.001197054,0.0007682313,0.002375041,0.9601502,0.007172644,0.0007231059,0.01656132],"study_design_scores_gemma":[0.0001307742,0.0007056035,0.1865774,0.00006837597,0.0001540143,0.00717671,0.006854141,0.008342237,0.7337849,0.005441887,0.05069232,0.00007167667],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9827493,0.008968135,0.003292499,0.0003630266,0.00002718802,0.00001086964,0.0001237961,0.00005635526,0.004408848],"genre_scores_gemma":[0.9972064,0.001086566,0.0006470776,0.00004575856,0.00001240903,0.000009945872,0.00004451266,0.000005310331,0.0009420021],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001797984,"threshold_uncertainty_score":0.004397631,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4288447807","doi":"10.1038/s41588-022-01134-8","title":"Single-nucleus and spatial transcriptome profiling of pancreatic cancer identifies multicellular dynamics associated with neoadjuvant treatment","year":2022,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":413,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Moonshot Research and Development Program; National Cancer Institute; Stand Up To Cancer; University of California, San Francisco; Klarman Cell Observatory, Broad Institute; National Science Foundation; Damon Runyon Cancer Research Foundation; Pancreatic Cancer Canada Foundation; Princess Margaret Cancer Foundation; Ludwig Institute for Cancer Research; Canadian Cancer Society Research Institute; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Institute of Diabetes and Digestive and Kidney Diseases; Lustgarten Foundation; Conquer Cancer Foundation; Government of Ontario; Howard Hughes Medical Institute","keywords":"Biology; Transcriptome; Pancreatic cancer; Multicellular organism; Cancer research; Progenitor cell; Gene expression profiling; Computational biology; Phenotype; Bioinformatics; Cell; Cancer; Stem cell; Genetics; Gene expression; Gene","authors":[{"name":"William L. Hwang","is_ca":false},{"name":"Karthik A. Jagadeesh","is_ca":false},{"name":"Jimmy A. Guo","is_ca":false},{"name":"Hannah I. Hoffman","is_ca":false},{"name":"Payman Yadollahpour","is_ca":false},{"name":"Jason Reeves","is_ca":false},{"name":"Rahul Mohan","is_ca":false},{"name":"Eugene Drokhlyansky","is_ca":false},{"name":"Nicholas Van Wittenberghe","is_ca":false},{"name":"Orr Ashenberg","is_ca":false},{"name":"Samouil L. Farhi","is_ca":false},{"name":"Denis Schapiro","is_ca":false},{"name":"Prajan Divakar","is_ca":false},{"name":"Eric Miller","is_ca":false},{"name":"Daniel R. Zollinger","is_ca":false},{"name":"George Eng","is_ca":false},{"name":"Jason M. Schenkel","is_ca":false},{"name":"Jennifer Su","is_ca":false},{"name":"Carina Shiau","is_ca":false},{"name":"Patrick Yu","is_ca":false},{"name":"William A. Freed-Pastor","is_ca":false},{"name":"Domenic Abbondanza","is_ca":false},{"name":"Arnav Mehta","is_ca":false},{"name":"Joshua Gould","is_ca":false},{"name":"Conner Lambden","is_ca":false},{"name":"Caroline Porter","is_ca":false},{"name":"Alexander M. Tsankov","is_ca":false},{"name":"Danielle Dionne","is_ca":false},{"name":"Julia Waldman","is_ca":false},{"name":"Michael S. Cuoco","is_ca":false},{"name":"Lan Nguyễn","is_ca":false},{"name":"Toni Delorey","is_ca":false},{"name":"Devan Phillips","is_ca":false},{"name":"Jaimie L. Barth","is_ca":false},{"name":"Marina Kem","is_ca":false},{"name":"Debora Ciprani","is_ca":false},{"name":"Jorge Roldán","is_ca":false},{"name":"Piotr Zelga","is_ca":false},{"name":"Vjola Jorgji","is_ca":false},{"name":"Jonathan Chen","is_ca":false},{"name":"Zackery A. Ely","is_ca":false},{"name":"Daniel Zhao","is_ca":false},{"name":"Kit Fuhrman","is_ca":false},{"name":"Robin Fropf","is_ca":false},{"name":"Joseph Beechem","is_ca":false},{"name":"Jay S. Loeffler","is_ca":false},{"name":"David P. Ryan","is_ca":false},{"name":"Colin D. Weekes","is_ca":false},{"name":"Cristina R. Ferrone","is_ca":false},{"name":"Motaz Qadan","is_ca":false},{"name":"Martin J. Aryee","is_ca":false},{"name":"Rakesh K. Jain","is_ca":false},{"name":"Donna Neuberg","is_ca":false},{"name":"Jennifer Y. Wo","is_ca":false},{"name":"Theodore S. Hong","is_ca":false},{"name":"Ramnik J. Xavier","is_ca":false},{"name":"Andrew J. Aguirre","is_ca":false},{"name":"Orit Rozenblatt–Rosen","is_ca":false},{"name":"Mari Mino–Kenudson","is_ca":false},{"name":"Carlos Fernández‐del Castillo","is_ca":false},{"name":"Andrew S. Liss","is_ca":false},{"name":"David T. Ting","is_ca":false},{"name":"Tyler Jacks","is_ca":false},{"name":"Aviv Regev","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02093330345950601,"gpt":0.3036530425954979,"spread":0.2827197391359919,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001042573,0.00009124612,0.0002867912,0.0002120871,0.0001915288,0.0005316312,0.0001053666,0.0001937314,0.00103546],"category_scores_gemma":[0.0002747369,0.0001496725,0.0001942252,0.000323887,0.0001916799,0.0003189532,0.000228221,0.0003237968,0.0002572987],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000386708,"about_ca_system_score_gemma":0.0002105849,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001284705,"about_ca_topic_score_gemma":0.002834594,"domain_scores_codex":[0.9998783,0.0000136187,0.000004665298,0.00003919894,0.00003350252,0.00003078151],"domain_scores_gemma":[0.9998763,0.00002649944,0.00003899026,0.000013471,0.00002171683,0.00002313494],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000467193,0.00002641038,0.02115501,0.00007295193,0.00003366971,0.00007300462,0.0001493797,0.0006528994,0.9686921,0.0002106602,0.0004103734,0.008056247],"study_design_scores_gemma":[0.00001576972,0.0002321683,0.7804766,0.00001985473,0.00006841018,0.0004040085,0.0009623775,0.01206998,0.2012421,0.0004793782,0.003999452,0.00002995262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953975,0.0008389936,0.001934409,0.0001097641,0.00001437086,0.000006821138,0.0007071936,0.00005117039,0.0009397715],"genre_scores_gemma":[0.997489,0.0003311393,0.000883237,0.00004446621,0.000005833465,0.00001635493,0.0004978211,0.00002049772,0.000711665],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001284705,"threshold_uncertainty_score":0.003463924,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2135802413","doi":"10.1093/annonc/mdr541","title":"Cigarette smoking and pancreatic cancer: an analysis from the International Pancreatic Cancer Case-Control Consortium (Panc4)","year":2011,"lang":"en","type":"article","venue":"Annals of Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":411,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Cancer Care Ontario; University of Toronto; Public Health Ontario; Toronto General Hospital","funders":"National Cancer Institute; National Institutes of Health; Associazione Italiana per la Ricerca sul Cancro; Canadian Institutes of Health Research; Cancer Research Society; Lustgarten Foundation","keywords":"Medicine; Pancreatic cancer; Odds ratio; Confidence interval; Internal medicine; Cigarette smoking; Case-control study; Cancer; Demography","authors":[{"name":"Cristina Bosetti","is_ca":false},{"name":"Ersilia Lucenteforte","is_ca":false},{"name":"Debra T. Silverman","is_ca":false},{"name":"Gloria M. Petersen","is_ca":false},{"name":"Paige M. Bracci","is_ca":false},{"name":"B.-T. Ji","is_ca":false},{"name":"Eva Negri","is_ca":false},{"name":"D. Li","is_ca":false},{"name":"Harvey A. Risch","is_ca":false},{"name":"Sara H. Olson","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"Anthony B. Miller","is_ca":true},{"name":"H. Bas Bueno‐de‐Mesquita","is_ca":false},{"name":"Renato Talamini","is_ca":false},{"name":"Jerry Polesel","is_ca":false},{"name":"P Ghadirian","is_ca":false},{"name":"Peter Baghurst","is_ca":false},{"name":"Witold Zatoński","is_ca":false},{"name":"Elizabeth T. H. Fontham","is_ca":false},{"name":"William R. Bamlet","is_ca":false},{"name":"Elizabeth A. Holly","is_ca":false},{"name":"Paola Bertuccio","is_ca":false},{"name":"Yu‐Tang Gao","is_ca":false},{"name":"Moustapha Hassan","is_ca":false},{"name":"Herbert Yu","is_ca":false},{"name":"Robert C. Kurtz","is_ca":false},{"name":"Michelle Cotterchio","is_ca":true},{"name":"Junwu Su","is_ca":false},{"name":"Patrick Maisonneuve","is_ca":false},{"name":"Eric J. Duell","is_ca":false},{"name":"Paolo Boffetta","is_ca":false},{"name":"Carlo La Vecchia","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1225224421857385,"gpt":0.4098809188053986,"spread":0.2873584766196601,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002753682,0.0008346094,0.0009444989,0.001744091,0.001193232,0.001344023,0.001377498,0.001068868,0.002529751],"category_scores_gemma":[0.006014809,0.0009866393,0.002311757,0.003441355,0.0005248547,0.0007091897,0.001151443,0.00111523,0.0003725601],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006319553,"about_ca_system_score_gemma":0.0006276264,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01717327,"about_ca_topic_score_gemma":0.01790994,"domain_scores_codex":[0.9971051,0.001195792,0.000265815,0.0006588277,0.0005095458,0.0002650053],"domain_scores_gemma":[0.9949048,0.001407286,0.001360386,0.001223279,0.0005522948,0.000551948],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001332846,0.00007602829,0.9953337,0.0000263026,0.001325984,0.0001395168,0.00007054849,0.00006361465,0.0003572383,0.00004560639,0.0003196332,0.0009088849],"study_design_scores_gemma":[0.000148124,0.0001465065,0.9974414,0.000008750123,0.001006654,0.0003289119,0.0001210625,0.0002249445,0.000090137,0.0000307197,0.0004423975,0.00001034894],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967065,0.0006557892,0.0002937632,0.00005557705,0.00002013635,0.00003540821,0.001734575,0.000008310779,0.0004899912],"genre_scores_gemma":[0.9959479,0.0002790302,0.0003127563,0.0000626539,0.00003605993,0.00006389195,0.002898959,0.00001593597,0.0003829479],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01717327,"threshold_uncertainty_score":0.03414661,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3001713806","doi":"10.1200/jco.19.02931","title":"Randomized, Multicenter, Phase II Trial of Gemcitabine and Cisplatin With or Without Veliparib in Patients With Pancreas Adenocarcinoma and a Germline <i>BRCA/PALB2</i> Mutation","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":398,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Cancer Institute","keywords":"Medicine; Gemcitabine; Veliparib; Internal medicine; PARP inhibitor; Pancreatic cancer; Clinical endpoint; Population; Oncology; PALB2; Surgery; Randomized controlled trial; Gastroenterology; Cancer; Germline mutation; Mutation","authors":[{"name":"Eileen M. O’Reilly","is_ca":false},{"name":"Jonathan W. Lee","is_ca":false},{"name":"Mark M. Zalupski","is_ca":false},{"name":"Marinela Capanu","is_ca":false},{"name":"Jennifer Park","is_ca":false},{"name":"Talia Golan","is_ca":false},{"name":"Esther Tahover","is_ca":false},{"name":"Maeve A. Lowery","is_ca":false},{"name":"Joanne F. Chou","is_ca":false},{"name":"Vaibhav Sahai","is_ca":false},{"name":"Robin Brenner","is_ca":false},{"name":"Hedy L. Kindler","is_ca":false},{"name":"Kenneth H. Yu","is_ca":false},{"name":"Alice Zervoudakis","is_ca":false},{"name":"Shreya Vemuri","is_ca":false},{"name":"Zsofia K. Stadler","is_ca":false},{"name":"Richard Kinh Gian","is_ca":false},{"name":"Neesha C. Dhani","is_ca":true},{"name":"Alice P. Chen","is_ca":false},{"name":"David P. Kelsen","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.106064802960647,"gpt":0.4575294089187974,"spread":0.3514646059581503,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002853716,0.002091127,0.002902299,0.0004517684,0.0005894391,0.001149592,0.001132183,0.001455578,0.004118723],"category_scores_gemma":[0.002260204,0.001112141,0.001353484,0.0004669331,0.001679664,0.001066357,0.000597846,0.002944151,0.0006695779],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008237333,"about_ca_system_score_gemma":0.002238247,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007240312,"about_ca_topic_score_gemma":0.001823534,"domain_scores_codex":[0.9986923,0.000881766,0.00006581302,0.000171627,0.00006185493,0.0001265784],"domain_scores_gemma":[0.998529,0.0003246898,0.0003347213,0.000120458,0.00006626701,0.0006248613],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.9630839,0.01785591,0.001718905,0.0002500118,0.0005236894,0.00006655022,0.00006958053,0.0008772983,0.004503647,0.0001417312,0.0008713827,0.01003746],"study_design_scores_gemma":[0.9328727,0.06452271,0.001057173,0.00001012524,0.0001530425,0.00003405253,0.00001348352,0.0004878712,0.0003402509,0.000103502,0.0003956529,0.000009369332],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984322,0.001868981,0.001072545,0.0007913492,0.0003894427,0.009192317,0.0007865969,0.0000809793,0.001495819],"genre_scores_gemma":[0.9805437,0.001369507,0.003010238,0.001546299,0.0004125267,0.009533178,0.00111853,0.00002603681,0.002439943],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004118723,"threshold_uncertainty_score":0.01509207,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2121120744","doi":"10.1200/jco.2003.02.098","title":"Comparison of Gemcitabine Versus the Matrix Metalloproteinase Inhibitor BAY 12-9566 in Patients With Advanced or Metastatic Adenocarcinoma of the Pancreas: A Phase III Trial of the National Cancer Institute of Canada Clinical Trials Group","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":397,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Gemcitabine; Medicine; Interim analysis; Pancreatic cancer; Clinical endpoint; Internal medicine; Oncology; Clinical trial; Cancer; Bay; Adenocarcinoma","authors":[{"name":"Michael J. Moore","is_ca":true},{"name":"John Hamm","is_ca":true},{"name":"Janet Dancey","is_ca":true},{"name":"Peter D. Eisenberg","is_ca":true},{"name":"M. Dagenais","is_ca":true},{"name":"Anthony Fields","is_ca":true},{"name":"Kennecke Hagan","is_ca":true},{"name":"Bernard R. Greenberg","is_ca":true},{"name":"Brian Colwell","is_ca":true},{"name":"Benny Zee","is_ca":true},{"name":"Dongsheng Tu","is_ca":true},{"name":"J. Ottaway","is_ca":true},{"name":"Rachel Humphrey","is_ca":true},{"name":"Lesley Seymour","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2971718577144146,"gpt":0.5606920091573374,"spread":0.2635201514429228,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001714109,0.001196408,0.002228535,0.0004123058,0.000472299,0.0009818223,0.0008140827,0.001045557,0.003326854],"category_scores_gemma":[0.001269222,0.0004239383,0.001580588,0.0006710953,0.0008346945,0.0004107389,0.000261214,0.002209473,0.0004210967],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002680129,"about_ca_system_score_gemma":0.004985616,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02047382,"about_ca_topic_score_gemma":0.06568077,"domain_scores_codex":[0.9994481,0.0002968114,0.00003625468,0.00006107405,0.00007382086,0.00008385687],"domain_scores_gemma":[0.9993042,0.0001238909,0.0001859601,0.000032228,0.00005548941,0.0002981988],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.9519539,0.005541773,0.001298376,0.0007325521,0.001134814,0.00005027459,0.00005639069,0.0005932719,0.00268788,0.0001213227,0.0009593258,0.03487006],"study_design_scores_gemma":[0.895138,0.09622432,0.005295814,0.00006019559,0.0008510672,0.00005473705,0.00003037738,0.0005577005,0.0005132739,0.00008125325,0.001177564,0.00001569775],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9767721,0.01513527,0.0003484886,0.001041752,0.000360615,0.003316929,0.0006860825,0.00005594427,0.002282768],"genre_scores_gemma":[0.9822692,0.0103409,0.001050992,0.001039995,0.0003258586,0.001643873,0.0008279916,0.00001339656,0.002487764],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02047382,"threshold_uncertainty_score":0.04070926,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2137508065","doi":"10.1016/s1470-2045(11)70004-3","title":"Axitinib plus gemcitabine versus placebo plus gemcitabine in patients with advanced pancreatic adenocarcinoma: a double-blind randomised phase 3 study","year":2011,"lang":"en","type":"article","venue":"The Lancet Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":396,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Gemcitabine; Medicine; Placebo; Axitinib; Internal medicine; Oncology; Double blind; Ursodeoxycholic acid; Pancreatic cancer; Chemotherapy; Cancer","authors":[{"name":"Hedy L. Kindler","is_ca":false},{"name":"Tatsuya Ioka","is_ca":false},{"name":"D. J. Richel","is_ca":false},{"name":"Jaafar Bennouna","is_ca":false},{"name":"Richard Létourneau","is_ca":true},{"name":"Takuji Okusaka","is_ca":false},{"name":"Akihiro Funakoshi","is_ca":false},{"name":"Junji Furuse","is_ca":false},{"name":"Young Suk Park","is_ca":false},{"name":"Shinichi Ohkawa","is_ca":false},{"name":"Gregory M. Springett","is_ca":false},{"name":"Harpreet Wasan","is_ca":false},{"name":"Peter C. Trask","is_ca":false},{"name":"Paul Bycott","is_ca":false},{"name":"Alejandro D. Ricart","is_ca":false},{"name":"Sinil Kim","is_ca":false},{"name":"Eric Van Cutsem","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1317467363897036,"gpt":0.3910343132591694,"spread":0.2592875768694659,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002452296,0.002927621,0.006980904,0.0008009826,0.0007601274,0.00166435,0.001450513,0.002778288,0.01107629],"category_scores_gemma":[0.002107017,0.001491055,0.004129052,0.000927214,0.00232346,0.001929632,0.0007936255,0.004835553,0.001731017],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001229867,"about_ca_system_score_gemma":0.001558385,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001376215,"about_ca_topic_score_gemma":0.002560076,"domain_scores_codex":[0.9988422,0.0006381825,0.00008148323,0.0002135434,0.00005999757,0.0001646096],"domain_scores_gemma":[0.9985785,0.0004731753,0.0002888441,0.0001506235,0.00007458955,0.0004342117],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.9933617,0.001985232,0.00008259512,0.0002642996,0.0003799486,0.00001042512,0.00001725428,0.0001184053,0.0006037866,0.00002313732,0.0001609136,0.002992154],"study_design_scores_gemma":[0.9706363,0.02842655,0.0003085764,0.0000105382,0.0002303721,0.000007567785,0.000007797439,0.00009587891,0.00008044739,0.00005337732,0.000135991,0.000006578531],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9793155,0.0073594,0.001076249,0.00100221,0.001409092,0.005455152,0.001608686,0.0002384708,0.002535251],"genre_scores_gemma":[0.9767825,0.005349114,0.002053967,0.001563617,0.001051619,0.00664866,0.001209957,0.00006785443,0.005272739],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01107629,"threshold_uncertainty_score":0.03705394,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2161479848","doi":"10.1200/jco.2014.59.7401","title":"Germline <i>BRCA</i> Mutations in a Large Clinic-Based Cohort of Patients With Pancreatic Adenocarcinoma","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":396,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute","funders":"Canadian Cancer Society Research Institute","keywords":"Medicine; Oncology; Family history; Pancreatic cancer; Genetic testing; Internal medicine; BRCA mutation; Cancer; Cohort; Sanger sequencing; Germline mutation; Breast cancer; Genetic counseling; Ovarian cancer; Adenocarcinoma; Mutation; Genetics; Gene","authors":[{"name":"Spring Holter","is_ca":true},{"name":"Ayelet Borgida","is_ca":true},{"name":"Anna Dodd","is_ca":true},{"name":"Robert C. Grant","is_ca":true},{"name":"Kara Semotiuk","is_ca":true},{"name":"David W. Hedley","is_ca":true},{"name":"Neesha C. Dhani","is_ca":true},{"name":"Steven A. Narod","is_ca":true},{"name":"Mohammad R. Akbari","is_ca":true},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Steven Gallinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1176631675558528,"gpt":0.46802045403138,"spread":0.3503572864755273,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004469595,0.0002817771,0.0003976348,0.0007818443,0.0008534632,0.0007635516,0.0004426651,0.0004698137,0.001644543],"category_scores_gemma":[0.002132872,0.000409536,0.0002921269,0.0006310206,0.0003865944,0.0003879187,0.0003993269,0.0005649757,0.0002912417],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000266259,"about_ca_system_score_gemma":0.0003125604,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004155839,"about_ca_topic_score_gemma":0.00430485,"domain_scores_codex":[0.9994557,0.0001282129,0.00004484004,0.0002039265,0.0001060388,0.00006122744],"domain_scores_gemma":[0.9989065,0.00027127,0.0003625261,0.00009181799,0.0001287581,0.0002391827],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005801228,0.00002894566,0.9986765,0.000003836998,0.00001919553,0.0002407233,0.00005036066,0.0000133334,0.0003173865,0.00000529062,0.00007588237,0.0005105791],"study_design_scores_gemma":[0.00002253471,0.0001416532,0.9960814,0.000006697185,0.00003604572,0.002988477,0.0002434828,0.000174788,0.0001065025,0.00001455827,0.0001794147,0.000004453895],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996371,0.00007274615,0.000038539,0.00002210446,0.000003486471,0.000006611744,0.00007357952,0.000003074758,0.000142708],"genre_scores_gemma":[0.9996498,0.00004754844,0.00005586538,0.00003297151,0.00001062656,0.000007197291,0.0001445041,0.000001625452,0.00004987893],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004155839,"threshold_uncertainty_score":0.00826329,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3212093805","doi":"10.1038/s41568-021-00418-1","title":"Pancreatic cancer evolution and heterogeneity: integrating omics and clinical data","year":2021,"lang":"en","type":"review","venue":"Nature reviews. Cancer","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":382,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network","funders":"","keywords":"Pancreatic cancer; Translational research; Cancer; Carcinogenesis; Genomics; Synthetic lethality; Bioinformatics; Medicine; Clinical trial; Genetic heterogeneity; Biology; Cancer research; Computational biology; Oncology; Internal medicine; Genome; Pathology; Phenotype; DNA repair; Gene; Genetics","authors":[{"name":"Ashton A. Connor","is_ca":false},{"name":"Steven Gallinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2273221533062809,"gpt":0.5547397160139439,"spread":0.327417562707663,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002708921,0.0007712594,0.002534611,0.003573206,0.0002421906,0.00223728,0.001239005,0.001112486,0.002677971],"category_scores_gemma":[0.004762314,0.0003326702,0.001444673,0.004468366,0.0006986693,0.001940127,0.001272437,0.002203254,0.0009893177],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00144286,"about_ca_system_score_gemma":0.002599052,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001658232,"about_ca_topic_score_gemma":0.003084166,"domain_scores_codex":[0.9992357,0.0002246205,0.0001109036,0.0001411367,0.0002328398,0.00005469905],"domain_scores_gemma":[0.9961875,0.002620953,0.0003639817,0.0001104279,0.0005886989,0.000128518],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001203942,0.00001970978,0.0009426273,0.03127903,0.0008020627,0.0001480761,0.00006525043,0.0005535895,0.0008368192,0.004461118,0.02757757,0.9331937],"study_design_scores_gemma":[0.00003859909,0.0001016933,0.005016067,0.03308215,0.001899197,0.001779599,0.0001704363,0.0003191678,0.0004710141,0.009504382,0.9475589,0.00005869179],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00008606262,0.998367,0.0001395518,0.0009589149,0.0001251297,0.000002655858,0.00005181326,0.000006876705,0.0002619684],"genre_scores_gemma":[0.0006798372,0.9984913,0.000138256,0.0003919898,0.000142247,0.000003535076,0.00007701971,0.00000178709,0.00007405254],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.003573206,"threshold_uncertainty_score":0.01432633,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2005021386","doi":"10.1158/1078-0432.ccr-09-0227","title":"<i>SMAD4</i> Gene Mutations Are Associated with Poor Prognosis in Pancreatic Cancer","year":2009,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":371,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute; National Institutes of Health; Rolfe Pancreatic Cancer Foundation; Lustgarten Foundation","keywords":"CDKN2A; Pancreatic cancer; Pancreas; Adenocarcinoma; Hazard ratio; Germline mutation; Gene; Internal medicine; Lymph node; Oncology; Biology; Cancer; Medicine; Cancer research; Mutation; Gastroenterology; Confidence interval; Genetics","authors":[{"name":"Amanda L. Blackford","is_ca":false},{"name":"Oscar K. Serrano","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Giovanni Parmigiani","is_ca":false},{"name":"Siân Jones","is_ca":false},{"name":"D. Williams Parsons","is_ca":false},{"name":"Jimmy Lin","is_ca":false},{"name":"Rebecca Leary","is_ca":false},{"name":"James R. Eshleman","is_ca":false},{"name":"Michael Goggins","is_ca":true},{"name":"Elizabeth M. Jaffee","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Anirban Maitra","is_ca":false},{"name":"John L. Cameron","is_ca":false},{"name":"Kelly Olino","is_ca":false},{"name":"Richard Schulick","is_ca":false},{"name":"Jordan M. Winter","is_ca":false},{"name":"Joseph M. Herman","is_ca":false},{"name":"Daniel A. Laheru","is_ca":false},{"name":"Alison P. Klein","is_ca":false},{"name":"Bert Vogelstein","is_ca":false},{"name":"Kenneth W. Kinzler","is_ca":false},{"name":"Victor E. Velculescu","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2538550752722822,"gpt":0.5412453488539867,"spread":0.2873902735817045,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003022426,0.0002335341,0.0002215169,0.0005433832,0.0001706469,0.0003401531,0.0001568151,0.0002311022,0.0009551939],"category_scores_gemma":[0.00126523,0.0001134465,0.0001600115,0.0003647903,0.0003561163,0.0001574645,0.0001921775,0.0002488609,0.0001607045],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001738897,"about_ca_system_score_gemma":0.0001479386,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004526587,"about_ca_topic_score_gemma":0.0005132706,"domain_scores_codex":[0.9998767,0.00003225092,0.00001508658,0.00002521835,0.00002917236,0.00002143221],"domain_scores_gemma":[0.9989524,0.000252425,0.0006069556,0.00003787587,0.0000602453,0.00009008821],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000840336,0.00003030664,0.9804663,0.00003736113,0.00007770607,0.0003139096,0.00002451614,0.0001872271,0.01311256,0.00001901119,0.00009516843,0.004795548],"study_design_scores_gemma":[0.00003345313,0.0002049714,0.990234,0.00001089195,0.000113197,0.002672326,0.0000686282,0.0004929457,0.005752203,0.00008770551,0.0003241351,0.000005583151],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991981,0.000456656,0.0001132425,0.0000367758,0.000002277446,0.000001920606,0.00005680578,0.000005986064,0.0001281956],"genre_scores_gemma":[0.9993334,0.00024301,0.0001874615,0.00001814491,0.000009493379,0.000003143041,0.0001446238,0.000002002936,0.00005855849],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009551939,"threshold_uncertainty_score":0.003195465,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2999401147","doi":"10.1158/0008-5472.can-19-2080","title":"Tumor Cell–Derived IL1β Promotes Desmoplasia and Immune Suppression in Pancreatic Cancer","year":2020,"lang":"en","type":"article","venue":"Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":371,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Desmoplasia; Pancreatic cancer; Immune system; Cancer; Biology; Cancer research; Medicine; Pathology; Immunology; Internal medicine","authors":[{"name":"Shipra Das","is_ca":false},{"name":"Beny Shapiro","is_ca":false},{"name":"Emily Vucic","is_ca":false},{"name":"Sandra Vogt","is_ca":false},{"name":"Dafna Bar‐Sagi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09124923583697828,"gpt":0.4199457631409499,"spread":0.3286965273039716,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110253,0.000258814,0.0001753325,0.0002324236,0.000100117,0.000269512,0.00006637764,0.0001348829,0.0009843563],"category_scores_gemma":[0.00005791328,0.00007520933,0.0001876047,0.0001030748,0.000152385,0.0001361037,0.0001758165,0.000475106,0.000241354],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000156244,"about_ca_system_score_gemma":0.00009910849,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001015036,"about_ca_topic_score_gemma":0.0001153373,"domain_scores_codex":[0.9999231,0.00001366084,0.000007389832,0.00001505435,0.0000180639,0.00002264346],"domain_scores_gemma":[0.9999413,0.000007021117,0.00002167188,0.000006783549,0.000005843737,0.0000172493],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002285459,0.00005049124,0.001230957,0.00005041531,0.000005283719,0.0001516835,0.00002589768,0.00004650123,0.9962558,0.00007933961,0.00004799985,0.001827242],"study_design_scores_gemma":[0.00006278879,0.001180524,0.02888966,0.00001601646,0.0000356259,0.001534041,0.0001507814,0.001418314,0.9597279,0.0001831319,0.006795725,0.000005499788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957162,0.001816117,0.001157182,0.00006420995,0.00002406757,0.00001956195,0.0001242535,0.00005782829,0.001020521],"genre_scores_gemma":[0.9981236,0.0006437901,0.0002762067,0.00002755109,0.0000102947,0.0000152749,0.000114896,0.000004462307,0.000783893],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009843563,"threshold_uncertainty_score":0.003293037,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2232697670","doi":"10.1158/2159-8290.cd-15-0402","title":"Whole Genome Sequencing Defines the Genetic Heterogeneity of Familial Pancreatic Cancer","year":2015,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":366,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Center for Advancing Translational Sciences; National Institute of Mental Health; National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Howard Hughes Medical Institute","keywords":"Pancreatic cancer; CDKN2A; Biology; Genetics; Cancer; Germline mutation; Genetic heterogeneity; Germline; Exome sequencing; PALB2; Genome; Hereditary pancreatitis; Gene; Mutation; Phenotype; Trypsinogen","authors":[{"name":"Nicholas J. Roberts","is_ca":false},{"name":"Alexis L. Norris","is_ca":false},{"name":"Gloria M. Petersen","is_ca":false},{"name":"Melissa L. Bondy","is_ca":false},{"name":"Randall E. Brand","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"Robert C. Kurtz","is_ca":false},{"name":"Sara H. Olson","is_ca":false},{"name":"Anil K. Rustgi","is_ca":false},{"name":"Ann G. Schwartz","is_ca":false},{"name":"Elena M. Stoffel","is_ca":false},{"name":"Sapna Syngal","is_ca":false},{"name":"George Zogopoulos","is_ca":true},{"name":"Syed Z. Ali","is_ca":false},{"name":"Jennifer E. Axilbund","is_ca":false},{"name":"Kari G. Chaffee","is_ca":false},{"name":"Yunching Chen","is_ca":false},{"name":"Michele L. Coté","is_ca":false},{"name":"Erica J. Childs","is_ca":false},{"name":"Christopher Douville","is_ca":false},{"name":"Fernando S. Goes","is_ca":false},{"name":"Joseph M. Herman","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Melissa Kramer","is_ca":false},{"name":"Alvin P. Makohon-Moore","is_ca":false},{"name":"W. Richard McCombie","is_ca":false},{"name":"K. Wyatt McMahon","is_ca":false},{"name":"Noushin Niknafs","is_ca":false},{"name":"Jennifer Parla","is_ca":false},{"name":"Mehdi Pirooznia","is_ca":false},{"name":"James B. Potash","is_ca":false},{"name":"Andrew D. Rhim","is_ca":false},{"name":"Alyssa Smith","is_ca":true},{"name":"Yuxuan Wang","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Laura D. Wood","is_ca":false},{"name":"Peter P. Zandi","is_ca":false},{"name":"Michael Goggins","is_ca":false},{"name":"Rachel Karchin","is_ca":false},{"name":"James R. Eshleman","is_ca":false},{"name":"Nickolas Papadopoulos","is_ca":false},{"name":"Kenneth W. Kinzler","is_ca":false},{"name":"Bert Vogelstein","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Alison P. Klein","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08514090614727875,"gpt":0.3590900383823112,"spread":0.2739491322350324,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003402082,0.0002406917,0.0002616409,0.0007771694,0.0002433442,0.0004039062,0.0001958005,0.0004472221,0.0009354148],"category_scores_gemma":[0.001346891,0.0001307547,0.0002222891,0.0009465759,0.0002162822,0.0001616896,0.0003527529,0.0003863097,0.0001751951],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002203656,"about_ca_system_score_gemma":0.0001348812,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001205998,"about_ca_topic_score_gemma":0.002967235,"domain_scores_codex":[0.9997672,0.00004751025,0.00002313813,0.00008001211,0.00004933221,0.00003273691],"domain_scores_gemma":[0.9993432,0.0003161666,0.0001653713,0.00006717627,0.00005393756,0.00005415889],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000925102,0.0000803287,0.5841759,0.0003426617,0.0008522927,0.005660393,0.0009257891,0.002580356,0.3095739,0.001334464,0.003141201,0.09040762],"study_design_scores_gemma":[0.00003808531,0.00008997371,0.9520482,0.00005692484,0.0003289512,0.01276914,0.0003049289,0.002786939,0.01764583,0.002428366,0.01148328,0.0000194076],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927338,0.001821514,0.002465091,0.0002458277,0.00001299927,0.000009022591,0.00155517,0.00003966633,0.001116969],"genre_scores_gemma":[0.9943141,0.0007463687,0.003009451,0.0001479639,0.00001958062,0.000009235691,0.001520756,0.00002639939,0.0002061035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001205998,"threshold_uncertainty_score":0.003129244,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3011562658","doi":"10.1158/1078-0432.ccr-19-3724","title":"GATA6 Expression Distinguishes Classical and Basal-like Subtypes in Advanced Pancreatic Cancer","year":2020,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":346,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; McGill University Health Centre; McGill University; University Health Network; Kingston General Hospital; Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"Pancreatic Cancer Canada Foundation; Canadian Cancer Society Research Institute; Hebrew University of Jerusalem; Government of Ontario; Princess Margaret Cancer Foundation","keywords":"Pancreatic cancer; GATA6; In situ hybridization; Biology; Basal (medicine); Internal medicine; FOLFIRINOX; Oncology; KRAS; Cancer research; Pathology; Medicine; Cancer; Gene expression; Gene; Genetics; Colorectal cancer","authors":[{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Barbara T. Grünwald","is_ca":true},{"name":"Gun-Ho Jang","is_ca":true},{"name":"Mehdi Masoomian","is_ca":true},{"name":"Sarah Picardo","is_ca":true},{"name":"Robert C. Grant","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Amy Zhang","is_ca":true},{"name":"Yifan Wang","is_ca":true},{"name":"Jessica K. Miller","is_ca":true},{"name":"Bernard Lam","is_ca":true},{"name":"Paul M. Krzyzanowski","is_ca":true},{"name":"Ilinca M. Lungu","is_ca":true},{"name":"John M.S. Bartlett","is_ca":true},{"name":"Melanie Peralta","is_ca":true},{"name":"Foram Vyas","is_ca":true},{"name":"Rama Khokha","is_ca":true},{"name":"James Biagi","is_ca":true},{"name":"Dianne Chadwick","is_ca":true},{"name":"Stephanie Ramotar","is_ca":true},{"name":"Shawn Hutchinson","is_ca":true},{"name":"Anna Dodd","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Faiyaz Notta","is_ca":true},{"name":"George Zogopoulos","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Sandra E. Fischer","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2617640132675826,"gpt":0.5403275624752844,"spread":0.2785635492077017,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007365675,0.0001680929,0.0003470026,0.0001741492,0.0001325717,0.0004903217,0.0001514512,0.0002407927,0.001139629],"category_scores_gemma":[0.0007171633,0.000132941,0.0002624029,0.0002241918,0.000300388,0.0002364609,0.0002211843,0.0003676066,0.0002363536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002256996,"about_ca_system_score_gemma":0.0001172594,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003346006,"about_ca_topic_score_gemma":0.0005723046,"domain_scores_codex":[0.9997342,0.00008349832,0.00002079133,0.00007694274,0.00005734215,0.00002731609],"domain_scores_gemma":[0.9996356,0.0001019815,0.0001153698,0.00004131601,0.00004391381,0.00006180957],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01627959,0.0001717438,0.8841477,0.0002278291,0.0002594108,0.0001103663,0.00009635261,0.0005845182,0.07400247,0.0001120333,0.0004128894,0.02359512],"study_design_scores_gemma":[0.0002452964,0.001764103,0.9796481,0.00002763374,0.0001947126,0.0006730469,0.0001567307,0.001953526,0.01411256,0.0002676384,0.0009449823,0.0000116683],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981208,0.0008824216,0.000311519,0.0000341227,0.000007465059,0.00000958645,0.000291391,0.000006633036,0.0003360583],"genre_scores_gemma":[0.9989856,0.0001525091,0.0002301143,0.00003607102,0.000006399664,0.000007022586,0.0004137226,0.000002493357,0.0001660755],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001139629,"threshold_uncertainty_score":0.003895342,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}