{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":2444,"total_is_capped":false,"direct_labels_cover":7,"predictions_cover":2444,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"7d1a09d6fa1b","filters":{"topic":"Pancreatic and Hepatic Oncology Research"}},"results":[{"id":"W2117853299","doi":"10.1016/j.surg.2005.05.001","title":"Postoperative pancreatic fistula: An international study group (ISGPF) definition","year":2005,"lang":"en","type":"review","venue":"Surgery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":4277,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal University Hospital","funders":"","keywords":"Medicine; Pancreatic fistula; Grading (engineering); Anastomosis; Complication; Surgery; General surgery; Pancreaticoduodenectomy; Incidence (geometry); Pancreas; Internal medicine; Resection","authors":[{"name":"Claudio Bassi","is_ca":false},{"name":"Christos Dervenis","is_ca":false},{"name":"Giovanni Butturini","is_ca":false},{"name":"Abe Fingerhut","is_ca":false},{"name":"Charles J. Yeo","is_ca":false},{"name":"Jakob R. Izbicki","is_ca":false},{"name":"John P. Neoptolemos","is_ca":true},{"name":"Michael G. Sarr","is_ca":false},{"name":"William Traverso","is_ca":false},{"name":"Marcus Büchler","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2012963192709977,"gpt":0.4421217076488544,"spread":0.2408253883778567,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001277019,0.0004324688,0.003016578,0.000571523,0.0001317938,0.0000505218,0.0002046847,0.0003390819,0.001578849],"category_scores_gemma":[0.0006978196,0.0003261859,0.0005132026,0.0003153292,0.0001257581,0.0001879228,0.00008925901,0.0006600734,0.0005655724],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005147997,"about_ca_system_score_gemma":0.001056,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009605788,"about_ca_topic_score_gemma":0.00005311424,"domain_scores_codex":[0.9966727,0.0007462003,0.0009341542,0.0006058963,0.0006264652,0.0004145923],"domain_scores_gemma":[0.9972401,0.001424121,0.0002750206,0.000594073,0.0002021884,0.000264502],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000118697,0.002293896,0.03366508,0.001793266,0.001473482,0.0007843134,0.0002654967,2.947135e-8,2.513289e-7,0.0001773952,0.002464752,0.9569634],"study_design_scores_gemma":[0.0006525399,0.0007387742,0.0132298,0.005480865,0.003066165,0.0005422435,0.0002860202,0.00001388634,5.214838e-8,0.00003045632,0.9755553,0.0004039212],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00813056,0.9765936,0.0000158626,0.0001339948,0.0005508957,0.00210427,0.00008693279,0.0001010259,0.01228285],"genre_scores_gemma":[0.001174735,0.9930136,0.0004308148,0.0001875329,0.0009787397,0.00062052,0.00193668,0.00007094725,0.001586473],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9730905,"threshold_uncertainty_score":0.999919,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2158134441","doi":"10.1200/jco.2006.07.9525","title":"Erlotinib Plus Gemcitabine Compared With Gemcitabine Alone in Patients With Advanced Pancreatic Cancer: A Phase III Trial of the National Cancer Institute of Canada Clinical Trials Group","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":3859,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Gemcitabine; Erlotinib; Medicine; Internal medicine; Pancreatic cancer; Erlotinib Hydrochloride; Oncology; Hazard ratio; Adverse effect; Placebo; Clinical endpoint; Clinical trial; Cancer; Epidermal growth factor receptor; Confidence interval; Pathology","authors":[{"name":"Malcolm J. Moore","is_ca":true},{"name":"David Goldstein","is_ca":true},{"name":"John Hamm","is_ca":true},{"name":"Arié Figer","is_ca":true},{"name":"J. Randolph Hecht","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"H. Au","is_ca":true},{"name":"P. Murawa","is_ca":true},{"name":"David Walde","is_ca":true},{"name":"Robert A. Wolff","is_ca":true},{"name":"Daniel de Castro","is_ca":true},{"name":"Robert Lim","is_ca":true},{"name":"Keyue Ding","is_ca":true},{"name":"Gary M. Clark","is_ca":true},{"name":"Theodora Voskoglou-Nomikos","is_ca":true},{"name":"Mieke Ptasynski","is_ca":true},{"name":"Wendy R. Parulekar","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1918460886647593,"gpt":0.5307549424111981,"spread":0.3389088537464388,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.02207563,0.000264837,0.00594495,0.0002294809,0.00006618838,0.000003674724,0.0003922333,0.0003951344,0.0001852582],"category_scores_gemma":[0.01708724,0.0001393375,0.0004383394,0.0006201845,0.001133785,0.0001464089,0.00007600649,0.001516165,3.433752e-7],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001004669,"about_ca_system_score_gemma":0.02693699,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.02019305,"about_ca_topic_score_gemma":0.2416714,"domain_scores_codex":[0.9876862,0.001675321,0.007968129,0.0003319166,0.001828419,0.0005099968],"domain_scores_gemma":[0.9797404,0.01026075,0.00683861,0.0002946297,0.002319579,0.00054605],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"observational","study_design_scores_codex":[0.4899908,0.005494729,0.485451,0.0000693579,0.001322572,0.00009491313,0.00007185235,0.0001817975,0.00003042494,0.00004629978,0.001095213,0.01615104],"study_design_scores_gemma":[0.407479,0.02329347,0.5636791,0.0005423991,0.0009696356,0.00001965223,0.0000751813,0.000197762,0.00001875689,0.0000279996,0.003591018,0.000105985],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9919807,0.0003286014,0.0001746345,0.002784062,0.001737556,0.002081441,0.00006617075,0.000004033304,0.0008427994],"genre_scores_gemma":[0.994629,0.0005472848,0.002550357,0.0008649604,0.001135626,0.00004612674,0.00001269775,0.00002287628,0.0001910374],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2214783,"threshold_uncertainty_score":0.9911922,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2285093314","doi":"10.1038/nature16965","title":"Genomic analyses identify molecular subtypes of pancreatic cancer","year":2016,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":3726,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Pancreas Centre (Canada)","funders":"Medical Research Council; Pancreatic Cancer UK; Wellcome Trust; Academy of Medical Sciences; National Cancer Institute; Cancer Research UK","keywords":"Biology; PDX1; Pancreatic cancer; Cancer research; KRAS; Wnt signaling pathway; Downregulation and upregulation; Progenitor cell; Cancer; Gene; Stem cell; Transcription factor; Mutation; Genetics","authors":[{"name":"Peter J. Bailey","is_ca":false},{"name":"David K. Chang","is_ca":false},{"name":"Kátia Nones","is_ca":false},{"name":"Amber L. Johns","is_ca":false},{"name":"Ann‐Marie Patch","is_ca":false},{"name":"Marie‐Claude Gingras","is_ca":false},{"name":"David K. Miller","is_ca":false},{"name":"Angelika N. Christ","is_ca":false},{"name":"Timothy J. C. Bruxner","is_ca":false},{"name":"Michael C. Quinn","is_ca":false},{"name":"Craig Nourse","is_ca":false},{"name":"L. Charles Murtaugh","is_ca":false},{"name":"Ivon Harliwong","is_ca":false},{"name":"Senel Idrisoglu","is_ca":false},{"name":"Suzanne Manning","is_ca":false},{"name":"Ehsan Nourbakhsh","is_ca":false},{"name":"Shivangi Wani","is_ca":false},{"name":"J. Lynn Fink","is_ca":false},{"name":"Oliver Holmes","is_ca":false},{"name":"Venessa Chin","is_ca":false},{"name":"Matthew J. Anderson","is_ca":false},{"name":"Stephen H. Kazakoff","is_ca":false},{"name":"Conrad Leonard","is_ca":false},{"name":"Felicity Newell","is_ca":false},{"name":"Nick M. Waddell","is_ca":false},{"name":"Scott Wood","is_ca":false},{"name":"Qinying Xu","is_ca":false},{"name":"Peter J. Wilson","is_ca":false},{"name":"Nicole Cloonan","is_ca":false},{"name":"Karin S. Kassahn","is_ca":false},{"name":"Darrin F. Taylor","is_ca":false},{"name":"Kelly Quek","is_ca":false},{"name":"Alan J. Robertson","is_ca":false},{"name":"Lorena Pantano","is_ca":false},{"name":"Laura Mincarelli","is_ca":false},{"name":"Luis Navarro-Sánchez","is_ca":false},{"name":"Lisa Evers","is_ca":false},{"name":"Jianmin Wu","is_ca":false},{"name":"Mark Pinese","is_ca":false},{"name":"Mark J. Cowley","is_ca":false},{"name":"Marc D. Jones","is_ca":false},{"name":"Emily K. Colvin","is_ca":false},{"name":"Adnan M. Nagrial","is_ca":false},{"name":"Emily S. Humphrey","is_ca":false},{"name":"Lorraine A. Chantrill","is_ca":false},{"name":"Amanda Mawson","is_ca":false},{"name":"Jeremy L. Humphris","is_ca":false},{"name":"Angela Chou","is_ca":false},{"name":"Marina Pajic","is_ca":false},{"name":"Christopher J. Scarlett","is_ca":false},{"name":"Andreia V. Pinho","is_ca":false},{"name":"Marc Giry-Laterrière","is_ca":false},{"name":"Ilse Rooman","is_ca":false},{"name":"Jaswinder S. Samra","is_ca":false},{"name":"James G. Kench","is_ca":false},{"name":"Jessica A. Lovell","is_ca":false},{"name":"Neil D. Merrett","is_ca":false},{"name":"Christopher W. Toon","is_ca":false},{"name":"Krishna Epari","is_ca":false},{"name":"Nam Q. Nguyen","is_ca":false},{"name":"Andrew P. Barbour","is_ca":false},{"name":"Nikolajs Zeps","is_ca":false},{"name":"Kim Moran‐Jones","is_ca":false},{"name":"Nigel B. Jamieson","is_ca":false},{"name":"Janet Graham","is_ca":false},{"name":"Fraser R. Duthie","is_ca":false},{"name":"Karin A. Oien","is_ca":false},{"name":"Jane Hair","is_ca":false},{"name":"Robert Grützmann","is_ca":false},{"name":"Anirban Maitra","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Richard A. Morgan","is_ca":false},{"name":"Rita T. Lawlor","is_ca":false},{"name":"Vincenzo Corbo","is_ca":false},{"name":"Claudio Bassi","is_ca":true},{"name":"Borislav C. Rusev","is_ca":false},{"name":"Paola Capelli","is_ca":false},{"name":"Roberto Salvia","is_ca":true},{"name":"Giampaolo Tortora","is_ca":false},{"name":"Debabrata Mukhopadhyay","is_ca":false},{"name":"Gloria M. Petersen","is_ca":false},{"name":"Donna M. Munzy","is_ca":false},{"name":"William E. Fisher","is_ca":false},{"name":"Saadia A. Karim","is_ca":false},{"name":"James R. Eshleman","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Christian Pilarsky","is_ca":false},{"name":"Jennifer P. Morton","is_ca":false},{"name":"Owen J. Sansom","is_ca":false},{"name":"Aldo Scarpa","is_ca":false},{"name":"Elizabeth A. Musgrove","is_ca":false},{"name":"Ulla‐Maja Bailey","is_ca":false},{"name":"Oliver Hofmann","is_ca":false},{"name":"Robert L. Sutherland","is_ca":false},{"name":"David A. Wheeler","is_ca":false},{"name":"Anthony J. Gill","is_ca":false},{"name":"Richard A. Gibbs","is_ca":false},{"name":"John V. Pearson","is_ca":false},{"name":"Nicola Waddell","is_ca":false},{"name":"Andrew V. Biankin","is_ca":false},{"name":"Sean M. Grimmond","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03526903766333178,"gpt":0.4244510632983102,"spread":0.3891820256349784,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001501363,0.00008846806,0.000390309,0.0001123547,0.00002248519,0.000003054863,0.0001006551,0.0005286314,0.0009515174],"category_scores_gemma":[0.0002656948,0.00004925545,0.0000943374,0.0001627011,0.0001169825,0.00002828732,0.00003264419,0.0004465268,0.0000464331],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007976287,"about_ca_system_score_gemma":0.0002380774,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009409183,"about_ca_topic_score_gemma":0.00001999814,"domain_scores_codex":[0.9991606,0.00004817868,0.0001705177,0.0001697408,0.0002604222,0.0001905733],"domain_scores_gemma":[0.9992831,0.000132417,0.00006481595,0.00026462,0.0001664193,0.00008862949],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001279931,0.0000377367,0.50744,0.00006667473,0.0002746173,0.00004584049,0.00003007533,2.585675e-7,0.4883798,0.0001923916,0.001531957,0.001872669],"study_design_scores_gemma":[0.001258572,0.0001406699,0.9092221,0.0002369625,0.0005752535,0.00002146902,0.0000271438,0.00001985727,0.08614282,0.0005295931,0.00174746,0.00007805516],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9845188,0.009660945,0.0001258439,0.002015852,0.00006758768,0.0001778456,0.00001749633,0.00001745512,0.003398221],"genre_scores_gemma":[0.9946732,0.000964781,0.0005096498,0.0003893997,0.00008622016,0.00001840875,0.000004268086,0.00001269933,0.003341384],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.402237,"threshold_uncertainty_score":0.9999617,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2135187257","doi":"10.1056/nejmsa035205","title":"Surgeon Volume and Operative Mortality in the United States","year":2003,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":3100,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute for Clinical Evaluative Sciences","funders":"Agency for Healthcare Research and Quality","keywords":"Medicine; Surgery; Mortality rate; Pneumonectomy; Resection; General surgery; Lung cancer; Internal medicine","authors":[{"name":"John D. Birkmeyer","is_ca":false},{"name":"Thérèse A. Stukel","is_ca":true},{"name":"Andrea E. Siewers","is_ca":false},{"name":"Philip P. Goodney","is_ca":false},{"name":"David E. Wennberg","is_ca":false},{"name":"F. Lee Lucas","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0529103368086932,"gpt":0.3807762527911453,"spread":0.3278659159824521,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003500786,0.00008666529,0.0004646709,0.0001996133,0.00004041387,0.000006213596,0.00006427676,0.0000472728,0.0003155318],"category_scores_gemma":[0.001501202,0.00004074264,0.00002330141,0.0002761532,0.0002074573,0.00004204226,0.000006573213,0.0004359693,0.000001712205],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003184148,"about_ca_system_score_gemma":0.0002420706,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008332009,"about_ca_topic_score_gemma":0.0001473107,"domain_scores_codex":[0.9985201,0.0004720859,0.0003823136,0.00007588812,0.0003839553,0.0001656186],"domain_scores_gemma":[0.998805,0.0006178165,0.0001061736,0.0001101285,0.0001734598,0.000187391],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000332556,0.00008111064,0.9816008,0.00002317061,0.00009843831,0.0006697144,0.00583532,0.00000862089,0.0001155408,0.0004743668,0.007296405,0.003463994],"study_design_scores_gemma":[0.04183675,0.002901644,0.8534459,0.0003140161,0.0002959074,0.0031124,0.004847923,0.0004727092,0.00003523663,0.001830603,0.09083667,0.00007019127],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.981538,0.001224298,0.0002148185,0.01388779,0.00008412456,0.0001479116,7.598013e-7,0.000002151856,0.002900117],"genre_scores_gemma":[0.9953736,0.002068389,0.0001924197,0.001293172,0.0004069571,0.000001276986,0.000006770711,0.000005073302,0.0006523309],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1281548,"threshold_uncertainty_score":0.3454852,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1987313243","doi":"10.1038/nature14169","title":"Whole genomes redefine the mutational landscape of pancreatic cancer","year":2015,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":2673,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Pancreas Centre (Canada)","funders":"National Cancer Institute; Medical Research Council; Queensland Government; National Institutes of Health; Royal Australasian College of Physicians; Gastroenterological Society of Australia; Cancer Institute NSW; Università degli Studi di Verona; University of Glasgow; Cancer Council NSW; National Health and Medical Research Council; Academy of Medical Sciences; Cancer Research UK; Australian Cancer Research Foundation; Australian Government; Petre Foundation; Wellcome Trust; Royal College of Pathologists of Australasia; Johns Hopkins University; R.T. Hall Trust; American Association for Cancer Research","keywords":"CDKN2A; Pancreatic cancer; Biology; Genome instability; Carcinogenesis; Genome; Copy-number variation; Cancer research; Copy number analysis; Cancer; Genetics; ARID1A; Gene; PALB2; Mutation; DNA damage; Germline mutation; DNA","authors":[{"name":"Nicola Waddell","is_ca":false},{"name":"Marina Pajic","is_ca":false},{"name":"Ann‐Marie Patch","is_ca":false},{"name":"David K. Chang","is_ca":false},{"name":"Karin S. Kassahn","is_ca":false},{"name":"Peter J. Bailey","is_ca":false},{"name":"Amber L. Johns","is_ca":false},{"name":"David S. Miller","is_ca":false},{"name":"Kátia Nones","is_ca":false},{"name":"Kelly Quek","is_ca":false},{"name":"Michael C. Quinn","is_ca":false},{"name":"Alan J. Robertson","is_ca":false},{"name":"Muhammad Zaki Hidayatullah Fadlullah","is_ca":false},{"name":"Timothy J. C. Bruxner","is_ca":false},{"name":"Angelika N. Christ","is_ca":false},{"name":"Ivon Harliwong","is_ca":false},{"name":"Senel Idrisoglu","is_ca":false},{"name":"Suzanne Manning","is_ca":false},{"name":"Craig Nourse","is_ca":false},{"name":"Ehsan Nourbakhsh","is_ca":false},{"name":"Shivangi Wani","is_ca":false},{"name":"Peter J. Wilson","is_ca":false},{"name":"Emma Markham","is_ca":false},{"name":"Nicole Cloonan","is_ca":false},{"name":"Matthew J. Anderson","is_ca":false},{"name":"J. Lynn Fink","is_ca":false},{"name":"Oliver Holmes","is_ca":false},{"name":"Stephen H. Kazakoff","is_ca":false},{"name":"Conrad Leonard","is_ca":false},{"name":"Felicity Newell","is_ca":false},{"name":"Barsha Poudel","is_ca":false},{"name":"Sarah Song","is_ca":false},{"name":"Darrin F. Taylor","is_ca":false},{"name":"Nick M. Waddell","is_ca":false},{"name":"Scott Wood","is_ca":false},{"name":"Qinying Xu","is_ca":false},{"name":"Jianmin Wu","is_ca":false},{"name":"Mark Pinese","is_ca":false},{"name":"Mark J. Cowley","is_ca":false},{"name":"Hong C. Lee","is_ca":false},{"name":"Marc D. Jones","is_ca":false},{"name":"Adnan Nagrial","is_ca":false},{"name":"Jeremy L. Humphris","is_ca":false},{"name":"Lorraine A. Chantrill","is_ca":false},{"name":"Venessa Chin","is_ca":false},{"name":"Angela Steinmann","is_ca":false},{"name":"Amanda Mawson","is_ca":false},{"name":"Emily S. Humphrey","is_ca":false},{"name":"Emily K. Colvin","is_ca":false},{"name":"Angela Chou","is_ca":false},{"name":"Christopher J. Scarlett","is_ca":false},{"name":"Andreia V. Pinho","is_ca":false},{"name":"Marc Giry-Laterrière","is_ca":false},{"name":"Ilse Rooman","is_ca":false},{"name":"Jaswinder S. Samra","is_ca":false},{"name":"James G. Kench","is_ca":false},{"name":"Jessica A. Pettitt","is_ca":false},{"name":"Neil D. Merrett","is_ca":false},{"name":"Christopher W. Toon","is_ca":false},{"name":"Krishna Epari","is_ca":false},{"name":"Nam Q. Nguyen","is_ca":false},{"name":"Andrew P. Barbour","is_ca":false},{"name":"Nikolajs Zeps","is_ca":false},{"name":"Nigel B. Jamieson","is_ca":false},{"name":"Janet Graham","is_ca":false},{"name":"Simone P. Niclou","is_ca":false},{"name":"Rolf Bjerkvig","is_ca":false},{"name":"Robert Grützmann","is_ca":false},{"name":"Daniela E. Aust","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Anirban Maitra","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Richard A. Morgan","is_ca":false},{"name":"Rita T. Lawlor","is_ca":false},{"name":"Vincenzo Corbo","is_ca":false},{"name":"Claudio Bassi","is_ca":true},{"name":"Massimo Falconi","is_ca":false},{"name":"Giuseppe Zamboni","is_ca":false},{"name":"Giampaolo Tortora","is_ca":false},{"name":"Margaret A. Tempero","is_ca":false},{"name":"Anthony J. Gill","is_ca":false},{"name":"James R. Eshleman","is_ca":false},{"name":"Christian Pilarsky","is_ca":false},{"name":"Aldo Scarpa","is_ca":false},{"name":"Elizabeth A. Musgrove","is_ca":false},{"name":"John V. Pearson","is_ca":false},{"name":"Andrew V. Biankin","is_ca":false},{"name":"Sean M. Grimmond","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03322413154354563,"gpt":0.3625845020212103,"spread":0.3293603704776647,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002956367,0.00006371886,0.0002381353,0.00004645213,0.00003477365,0.000004084014,0.00008504947,0.000332784,0.0003470523],"category_scores_gemma":[0.0002990793,0.00003482969,0.00004000814,0.000173065,0.00009666232,0.00001991073,0.00002470705,0.0007382419,0.00003102433],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004086221,"about_ca_system_score_gemma":0.0005081843,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005054851,"about_ca_topic_score_gemma":0.0000279104,"domain_scores_codex":[0.9992417,0.0000411619,0.0001271269,0.0001001878,0.0003561292,0.0001337602],"domain_scores_gemma":[0.9992837,0.0001528962,0.00004945329,0.0001726368,0.0002544824,0.00008682886],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004578507,0.0001220898,0.8333061,0.0000932911,0.0002888366,0.00004531572,0.001174383,0.00001927166,0.001190173,0.001775846,0.15895,0.002576764],"study_design_scores_gemma":[0.003767189,0.0004622757,0.8713317,0.000129511,0.000472254,0.0001451374,0.001187519,0.00159902,0.0005189419,0.002248327,0.11802,0.0001181382],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9301661,0.02221191,0.00001171033,0.01901912,0.000113822,0.0002700045,0.00003523824,0.0000162877,0.02815578],"genre_scores_gemma":[0.9900448,0.0001832918,0.0006642899,0.0009742856,0.0002480488,0.00003378212,0.00004498478,0.000008010119,0.007798457],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05987872,"threshold_uncertainty_score":0.379998,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2917919815","doi":"10.14740/wjon1166","title":"Epidemiology of Pancreatic Cancer: Global Trends, Etiology and Risk Factors","year":2019,"lang":"en","type":"review","venue":"World Journal of Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":2292,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"","keywords":"Medicine; Pancreatic cancer; Etiology; Disease; Cancer; Pancreatitis; Population; Mortality rate; Epidemiology; Family history; Diabetes mellitus; Internal medicine; Environmental health","authors":[{"name":"Prashanth Rawla","is_ca":false},{"name":"Tagore Sunkara","is_ca":false},{"name":"Vinaya Gaduputi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.170586051001457,"gpt":0.4960486307512174,"spread":0.3254625797497603,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002718863,0.0004855374,0.01126403,0.001028872,0.0000595203,0.000001620773,0.0003491823,0.0009552709,0.000795719],"category_scores_gemma":[0.001963997,0.0003082312,0.0009575797,0.0006870773,0.000874968,0.00004376116,0.0001487547,0.001751155,0.00001805588],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0010223,"about_ca_system_score_gemma":0.003729425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005189514,"about_ca_topic_score_gemma":0.0003604519,"domain_scores_codex":[0.9931868,0.002869926,0.002666269,0.0003979409,0.0002407165,0.000638365],"domain_scores_gemma":[0.9877099,0.006779231,0.004356347,0.0003962615,0.0003331475,0.0004250531],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002637707,0.0001613159,0.4563911,0.003550879,0.002693438,0.0001092685,0.00003760012,9.062782e-7,1.270589e-7,0.0003017759,0.00237451,0.5341153],"study_design_scores_gemma":[0.002109877,0.004587965,0.07343613,0.00490009,0.01829238,0.002806884,0.00004497262,0.000009366381,1.024545e-7,0.0002550916,0.8933544,0.0002027768],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00564968,0.9879086,0.00003148091,0.0003983302,0.000854439,0.0004650813,0.0001488367,0.000007964234,0.004535607],"genre_scores_gemma":[0.0005702564,0.9950041,0.001494308,0.00009165735,0.0005052359,0.00002243106,0.00003086511,0.00003304274,0.002248062],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8909798,"threshold_uncertainty_score":0.999937,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2161884651","doi":"10.1038/nature11547","title":"Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes","year":2012,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":2113,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Sinai Hospital; University Health Network; Ontario Institute for Cancer Research","funders":"Università degli Studi di Verona; Gastroenterological Society of Australia; Associazione Italiana per la Ricerca sul Cancro; Queensland Government; Agency for Science, Technology and Research; National Institutes of Health; Cancer Council NSW; Royal Australasian College of Physicians; Cancer Institute NSW; National Health and Medical Research Council; Wellcome Trust; Cancer Research UK; National Cancer Institute; Australian Cancer Research Foundation; Australian Government; National Human Genome Research Institute; Johns Hopkins University; Petre Foundation; Royal College of Pathologists of Australasia; Medical Research Council; Ministero dello Sviluppo Economico; Cancer Prevention and Research Institute of Texas; R.T. Hall Trust; American Association for Cancer Research","keywords":"Biology; KRAS; Exome sequencing; Genetics; Pancreatic cancer; CDKN2A; Carcinogenesis; Exome; Cancer research; Gene; Cancer; Mutation","authors":[{"name":"Andrew V. Biankin","is_ca":false},{"name":"Nicola Waddell","is_ca":false},{"name":"Karin S. Kassahn","is_ca":false},{"name":"Marie‐Claude Gingras","is_ca":true},{"name":"Lakshmi Muthuswamy","is_ca":true},{"name":"Amber L. Johns","is_ca":false},{"name":"David K. Miller","is_ca":false},{"name":"Peter J. Wilson","is_ca":false},{"name":"Ann‐Marie Patch","is_ca":false},{"name":"Jianmin Wu","is_ca":false},{"name":"David K. Chang","is_ca":false},{"name":"Mark J. Cowley","is_ca":false},{"name":"Brooke Gardiner","is_ca":false},{"name":"Sarah Song","is_ca":false},{"name":"Ivon Harliwong","is_ca":false},{"name":"Senel Idrisoglu","is_ca":false},{"name":"Craig Nourse","is_ca":false},{"name":"Ehsan Nourbakhsh","is_ca":false},{"name":"Suzanne Manning","is_ca":false},{"name":"Shivangi Wani","is_ca":false},{"name":"Milena Gongora","is_ca":false},{"name":"Marina Pajic","is_ca":false},{"name":"Christopher J. Scarlett","is_ca":false},{"name":"Anthony J. Gill","is_ca":false},{"name":"Andreia V. Pinho","is_ca":false},{"name":"Ilse Rooman","is_ca":false},{"name":"Matthew J. Anderson","is_ca":false},{"name":"Oliver Holmes","is_ca":false},{"name":"Conrad Leonard","is_ca":false},{"name":"Darrin F. Taylor","is_ca":false},{"name":"Scott Wood","is_ca":false},{"name":"Qinying Xu","is_ca":false},{"name":"Kátia Nones","is_ca":false},{"name":"J. Lynn Fink","is_ca":false},{"name":"Angelika N. Christ","is_ca":false},{"name":"Timothy J. C. Bruxner","is_ca":false},{"name":"Nicole Cloonan","is_ca":false},{"name":"Gabriel Kolle","is_ca":false},{"name":"Felicity Newell","is_ca":false},{"name":"Mark Pinese","is_ca":false},{"name":"R. Scott Mead","is_ca":false},{"name":"Jeremy L. Humphris","is_ca":false},{"name":"Warren Kaplan","is_ca":false},{"name":"Marc D. Jones","is_ca":false},{"name":"Emily K. Colvin","is_ca":false},{"name":"Adnan Nagrial","is_ca":false},{"name":"Emily S. Humphrey","is_ca":false},{"name":"Angela Chou","is_ca":false},{"name":"Venessa Chin","is_ca":false},{"name":"Lorraine A. Chantrill","is_ca":false},{"name":"Amanda Mawson","is_ca":false},{"name":"Jaswinder S. Samra","is_ca":false},{"name":"James G. Kench","is_ca":false},{"name":"Jessica A. Lovell","is_ca":false},{"name":"Roger J. Daly","is_ca":false},{"name":"Neil D. Merrett","is_ca":false},{"name":"Christopher W. Toon","is_ca":false},{"name":"Krishna Epari","is_ca":false},{"name":"Nam Q. Nguyen","is_ca":false},{"name":"Andrew P. Barbour","is_ca":false},{"name":"Nikolajs Zeps","is_ca":false},{"name":"Nipun Kakkar","is_ca":false},{"name":"Fengmei Zhao","is_ca":false},{"name":"Yuan Wu","is_ca":false},{"name":"Min Wang","is_ca":false},{"name":"Donna M. Muzny","is_ca":false},{"name":"William E. Fisher","is_ca":false},{"name":"F. Charles Brunicardi","is_ca":false},{"name":"Sally E. Hodges","is_ca":false},{"name":"Jeffrey G. Reid","is_ca":false},{"name":"Jennifer Drummond","is_ca":false},{"name":"Kyle Chang","is_ca":false},{"name":"Yi Han","is_ca":false},{"name":"Lora Lewis","is_ca":false},{"name":"Huyen Dinh","is_ca":false},{"name":"Christian Buhay","is_ca":true},{"name":"Timothy A. Beck","is_ca":true},{"name":"Lee E. Timms","is_ca":true},{"name":"Michelle Sam","is_ca":true},{"name":"Kimberly Begley","is_ca":true},{"name":"Andrew Brown","is_ca":true},{"name":"Deepa Pai","is_ca":true},{"name":"Ami Panchal","is_ca":true},{"name":"Nicholas Buchner","is_ca":true},{"name":"Richard de Borja","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Christina K. Yung","is_ca":true},{"name":"Stefano Serra","is_ca":true},{"name":"Nicole Onetto","is_ca":true},{"name":"Debabrata Mukhopadhyay","is_ca":true},{"name":"Ming‐Sound Tsao","is_ca":true},{"name":"Patricia A. Shaw","is_ca":true},{"name":"Gloria M. Petersen","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Anirban Maitra","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Richard D. Schulick","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Richard A. Morgan","is_ca":false},{"name":"Rita T. Lawlor","is_ca":false},{"name":"Paola Capelli","is_ca":false},{"name":"Vincenzo Corbo","is_ca":false},{"name":"Maria Scardoni","is_ca":false},{"name":"Giampaolo Tortora","is_ca":false},{"name":"Margaret A. Tempero","is_ca":false},{"name":"Karen M. Mann","is_ca":false},{"name":"Nancy A. Jenkins","is_ca":false},{"name":"Pedro A. Pérez–Mancera","is_ca":false},{"name":"David J. Adams","is_ca":false},{"name":"David A. Largaespada","is_ca":false},{"name":"Lodewyk F.A. Wessels","is_ca":false},{"name":"Alistair G. Rust","is_ca":true},{"name":"Lincoln Stein","is_ca":true},{"name":"David A. Tuveson","is_ca":false},{"name":"Neal G. Copeland","is_ca":false},{"name":"Elizabeth A. Musgrove","is_ca":false},{"name":"Aldo Scarpa","is_ca":false},{"name":"James R. Eshleman","is_ca":true},{"name":"Thomas J. Hudson","is_ca":true},{"name":"Robert L. Sutherland","is_ca":false},{"name":"David A. Wheeler","is_ca":false},{"name":"John V. Pearson","is_ca":true},{"name":"John D. McPherson","is_ca":true},{"name":"Richard A. Gibbs","is_ca":false},{"name":"Sean M. Grimmond","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03125184745655787,"gpt":0.3649423524171552,"spread":0.3336905049605974,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003775516,0.0001216656,0.0003623739,0.0001573956,0.00006969301,0.00000703803,0.00008759696,0.000747052,0.0004726603],"category_scores_gemma":[0.0001937271,0.00009368327,0.00005122831,0.0002964555,0.00006527967,0.00009834225,0.00003080706,0.00133171,0.00006971617],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001966182,"about_ca_system_score_gemma":0.0003029804,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001348221,"about_ca_topic_score_gemma":0.0002492723,"domain_scores_codex":[0.9988431,0.00007847777,0.0002141809,0.0001719588,0.0002633558,0.0004289272],"domain_scores_gemma":[0.9993139,0.0001187247,0.00004963003,0.0002524398,0.00009773862,0.0001675826],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006538947,0.0001404591,0.9807484,0.00008571401,0.00005151502,0.00001998068,0.0006122594,0.000001371392,0.005031142,0.0008078769,0.007320364,0.005115522],"study_design_scores_gemma":[0.0008756375,0.00007396028,0.9337857,0.0001390762,0.00008024851,0.00003564935,0.0001357072,0.0001022862,0.001015545,0.0001357803,0.06350503,0.000115351],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8885814,0.08246202,0.00001676797,0.003207841,0.0002580028,0.0004432318,0.00001931399,0.00003326936,0.02497813],"genre_scores_gemma":[0.9776511,0.001648112,0.002067136,0.001303446,0.0007215597,0.0001749229,0.0000214014,0.00001689759,0.01639547],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08906963,"threshold_uncertainty_score":0.578569,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2157590016","doi":"10.1001/jama.2010.1275","title":"Adjuvant Chemotherapy With Fluorouracil Plus Folinic Acid vs Gemcitabine Following Pancreatic Cancer Resection","year":2010,"lang":"en","type":"article","venue":"JAMA","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1387,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre","funders":"National Institute for Health and Care Research; Cancer Research UK","keywords":"Medicine; Folinic acid; Gemcitabine; Pancreatic cancer; Fluorouracil; Antimetabolite; Internal medicine; Pancreatic disease; Interquartile range; Surgery; Gastroenterology; Chemotherapy; Cancer; Oncology; Pancreas","authors":[{"name":"John P. Neoptolemos","is_ca":false},{"name":"Deborah Stocken","is_ca":false},{"name":"Claudio Bassi","is_ca":false},{"name":"Paula Ghaneh","is_ca":false},{"name":"David Cunningham","is_ca":false},{"name":"David Goldstein","is_ca":false},{"name":"Robert Padbury","is_ca":false},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"C. Mariette","is_ca":false},{"name":"Moritz N. Wente","is_ca":false},{"name":"Jakob R. Izbicki","is_ca":false},{"name":"Helmut Friess","is_ca":false},{"name":"Markus M. Lerch","is_ca":false},{"name":"Christos Dervenis","is_ca":false},{"name":"Attila Oláh","is_ca":false},{"name":"Giovanni Butturini","is_ca":false},{"name":"Ryuichiro Doi","is_ca":false},{"name":"Pehr Lind","is_ca":false},{"name":"David B. Smith","is_ca":false},{"name":"Juan W. Valle","is_ca":false},{"name":"Daniel H. Palmer","is_ca":false},{"name":"John Buckels","is_ca":false},{"name":"Joyce Thompson","is_ca":false},{"name":"Colin J. McKay","is_ca":false},{"name":"Charlotte Rawcliffe","is_ca":false},{"name":"Markus W. Büchler","is_ca":false},{"name":"for the European Study Group for Pancreatic Cancer","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02258065455326055,"gpt":0.3399795159423628,"spread":0.3173988613891023,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006102322,0.0002086205,0.0007004304,0.0001330434,0.0001670672,0.0000367478,0.0001356855,0.0002602772,0.001246798],"category_scores_gemma":[0.0003807937,0.0001450015,0.0001326783,0.0003037418,0.0001275639,0.0001597537,0.00003360266,0.0007935413,0.0001020706],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002049388,"about_ca_system_score_gemma":0.000698796,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008177882,"about_ca_topic_score_gemma":0.000994458,"domain_scores_codex":[0.9982562,0.0000650049,0.0003003712,0.0003667049,0.000514793,0.0004969003],"domain_scores_gemma":[0.9987626,0.0001857245,0.00009907418,0.0004906426,0.0002026335,0.0002592923],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.009352732,0.0003287388,0.806244,0.0002793239,0.001053836,0.0004287322,0.00144396,0.000003153042,0.1065117,0.0001552078,0.006459838,0.06773876],"study_design_scores_gemma":[0.02886095,0.003438881,0.9315435,0.0006029689,0.000879788,0.0003812734,0.0004078728,0.003391931,0.01824793,0.0002726464,0.01153399,0.0004382316],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9828682,0.000565469,0.0002700367,0.006580552,0.0003313063,0.0006803629,0.000005893271,0.0001008344,0.008597362],"genre_scores_gemma":[0.9861494,0.0003538876,0.003168729,0.001055135,0.0009208572,0.0002421946,0.00002135579,0.00004937799,0.008039065],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1252995,"threshold_uncertainty_score":0.9996662,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2066254965","doi":"10.1038/nature09460","title":"The patterns and dynamics of genomic instability in metastatic pancreatic cancer","year":2010,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1324,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Cancer Research","funders":"National Cancer Institute; Wellcome Trust; National Institutes of Health; Uehara Memorial Foundation; Skip Viragh Foundation","keywords":"Pancreatic cancer; Genome instability; Metastasis; Cancer; Somatic evolution in cancer; Exome sequencing; Biology; Carcinogenesis; Exome; Evolutionary dynamics; Genetic heterogeneity; Genome; Cancer research; Oncology; Medicine; Genetics; Mutation; Gene; DNA; Phenotype; Population","authors":[{"name":"Peter J. Campbell","is_ca":false},{"name":"Shinichi Yachida","is_ca":false},{"name":"Laura Mudie","is_ca":false},{"name":"Philip J. Stephens","is_ca":false},{"name":"Erin Pleasance","is_ca":false},{"name":"Lucy Stebbings","is_ca":false},{"name":"Laura Morsberger","is_ca":false},{"name":"Calli Latimer","is_ca":false},{"name":"Stuart McLaren","is_ca":false},{"name":"Meng-Lay Lin","is_ca":false},{"name":"David J. McBride","is_ca":false},{"name":"Ignacio Varela","is_ca":false},{"name":"Serena Nik‐Zainal","is_ca":false},{"name":"Catherine Leroy","is_ca":false},{"name":"Mingming Jia","is_ca":false},{"name":"Andrew Menzies","is_ca":false},{"name":"Adam P. Butler","is_ca":false},{"name":"Jon W. Teague","is_ca":false},{"name":"Constance A. Griffin","is_ca":false},{"name":"John H. Burton","is_ca":false},{"name":"Harold Swerdlow","is_ca":false},{"name":"Michael A. Quail","is_ca":false},{"name":"Michael R. Stratton","is_ca":true},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"P. Andrew Futreal","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01452769535676719,"gpt":0.3488258455886692,"spread":0.3342981502319021,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000488735,0.00007134129,0.0002832004,0.00004649914,0.00004331051,0.000005629584,0.0000806589,0.0003004647,0.0001033354],"category_scores_gemma":[0.0003459358,0.00004199251,0.00002735396,0.00008856737,0.0001923347,0.00002061715,0.00003971797,0.001832743,0.000001461284],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006559852,"about_ca_system_score_gemma":0.0002181428,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006904636,"about_ca_topic_score_gemma":0.01649428,"domain_scores_codex":[0.9993189,0.00005493638,0.0001785421,0.0001297962,0.0001501799,0.000167675],"domain_scores_gemma":[0.9991848,0.0003990106,0.00004832047,0.0002366932,0.00007092361,0.00006021987],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001102154,0.00005189503,0.990299,0.0001363126,0.00004679823,0.000008918145,0.0001819595,2.078679e-7,0.001944206,0.001077743,0.00003318226,0.006109498],"study_design_scores_gemma":[0.000759587,0.00006623363,0.9952281,0.00003571827,0.00008435194,0.00001800664,0.000216,0.002309338,0.00009476909,0.0008355683,0.0003145384,0.00003783598],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948282,0.001187453,0.000009012991,0.002787486,0.00009081658,0.0003444737,0.00003201335,0.000005349011,0.0007151514],"genre_scores_gemma":[0.9984709,0.0006910651,0.0003588931,0.0001585494,0.0000290494,0.00003319476,0.000007855479,0.000007110262,0.0002433579],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01580382,"threshold_uncertainty_score":0.9204197,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2016448153","doi":"10.1053/j.gastro.2015.01.015","title":"American Gastroenterological Association Institute Guideline on the Diagnosis and Management of Asymptomatic Neoplastic Pancreatic Cysts","year":2015,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1114,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Hamilton Health Sciences","funders":"U.S. Department of Veterans Affairs; Feinberg School of Medicine; School of Medicine, Vanderbilt University; Johns Hopkins University; University of Minnesota; Medical School, University of Michigan; Northwestern University; University of Pennsylvania; Yale University; Vanderbilt University; University of North Carolina at Chapel Hill; Perelman School of Medicine, University of Pennsylvania","keywords":"Medicine; Guideline; Asymptomatic; Malignancy; Cyst; Pancreatic cancer; General surgery; Pancreatic cyst; Dysplasia; Adenocarcinoma; Radiology; Cancer; Surgery; Internal medicine; Pathology","authors":[{"name":"Santhi Swaroop Vege","is_ca":false},{"name":"Barry Ziring","is_ca":false},{"name":"Rajeev Jain","is_ca":false},{"name":"Paul Moayyedi","is_ca":true},{"name":"Megan A. Adams","is_ca":true},{"name":"Spencer D. Dorn","is_ca":false},{"name":"Sharon Dudley‐Brown","is_ca":false},{"name":"Steven L. Flamm","is_ca":false},{"name":"Ziad F. Gellad","is_ca":false},{"name":"Claudia Gruss","is_ca":false},{"name":"Lawrence R. Kosinski","is_ca":false},{"name":"Joseph K. Lim","is_ca":false},{"name":"Yvonne Romero","is_ca":false},{"name":"Joel H. Rubenstein","is_ca":false},{"name":"Walter E. Smalley","is_ca":false},{"name":"Shahnaz Sultan","is_ca":false},{"name":"David S. Weinberg","is_ca":false},{"name":"Yu‐Xiao Yang","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04465345452149518,"gpt":0.3300986184087442,"spread":0.2854451638872491,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000856395,0.0001762093,0.0006830108,0.000115993,0.00005309017,0.000008962134,0.0001399678,0.00006708914,0.00004445119],"category_scores_gemma":[0.0006177194,0.0001123925,0.00007137524,0.0001265178,0.0004278699,0.00003678804,0.0001327491,0.000220243,0.00003333099],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001983919,"about_ca_system_score_gemma":0.000038351,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005110383,"about_ca_topic_score_gemma":0.00005115286,"domain_scores_codex":[0.998026,0.000320562,0.0005106403,0.0002716636,0.0004018989,0.0004692295],"domain_scores_gemma":[0.9986767,0.0003679644,0.0002878533,0.0003003434,0.0001464304,0.0002207554],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001267901,0.0003016377,0.9915596,0.0000589293,0.0004931157,0.00007410517,0.0001001855,0.00001761676,0.0000244156,0.0003023319,0.005289252,0.000510909],"study_design_scores_gemma":[0.003322647,0.008589541,0.9845651,0.0001408939,0.0005941894,0.0001542963,0.0003661129,0.001393659,0.00001437126,0.0001778501,0.0006281047,0.00005323407],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9853713,0.0000356601,0.0009595933,0.01209037,0.0001104503,0.0006181677,0.00001056838,0.0000306765,0.000773225],"genre_scores_gemma":[0.9939709,0.0002993151,0.002611932,0.002604704,0.00006568751,0.000227785,0.00002038623,0.00001214335,0.0001871609],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009485665,"threshold_uncertainty_score":0.4583232,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1964064067","doi":"10.1097/00000478-200105000-00003","title":"Pancreatic Intraepithelial Neoplasia","year":2001,"lang":"en","type":"article","venue":"The American Journal of Surgical Pathology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1112,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"National Cancer Institute","keywords":"Medicine; Pancreatic Intraepithelial Neoplasia; Dysplasia; Medical diagnosis; Grading (engineering); Surgical pathology; Pathology; Intraepithelial neoplasia; Pancreatic duct; Pancreas; Cohen's kappa; Radiology; Carcinoma in situ; Cytopathology; Kappa; Carcinoma; Pancreatic cancer; Internal medicine; Cancer; Cytology","authors":[{"name":"Ralph H. Hruban","is_ca":false},{"name":"Volkan Adsay","is_ca":false},{"name":"Jorge Albores‐Saavedra","is_ca":false},{"name":"Carolyn C. Compton","is_ca":false},{"name":"Elizabeth S. Garrett","is_ca":false},{"name":"Steven N. Goodman","is_ca":false},{"name":"Scott E. Kern","is_ca":false},{"name":"David S. Klimstra","is_ca":false},{"name":"Günter Klöppel","is_ca":false},{"name":"Daniel S. Longnecker","is_ca":false},{"name":"Jütta Lüttges","is_ca":false},{"name":"G.J.A. Offerhaus","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02201122236157785,"gpt":0.3327266718055854,"spread":0.3107154494440075,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001462806,0.0001236693,0.0009450931,0.0001345807,0.00009761924,0.000007537029,0.000219767,0.00005361718,0.000426068],"category_scores_gemma":[0.0002878714,0.00006492831,0.000196991,0.0003523119,0.00132637,0.00003660717,0.00004421908,0.0007438663,0.00009894968],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005639559,"about_ca_system_score_gemma":0.000231505,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001995474,"about_ca_topic_score_gemma":0.000001537999,"domain_scores_codex":[0.9980384,0.0006534259,0.0005033953,0.0001205548,0.0003206237,0.0003635722],"domain_scores_gemma":[0.9978378,0.001089406,0.0003893852,0.0002487664,0.0001930245,0.0002416357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01419786,0.0006643545,0.7884249,0.00001903136,0.0005327879,0.04978216,0.001234455,0.0000113834,0.003776606,0.0009939999,0.002201028,0.1381614],"study_design_scores_gemma":[0.005699721,0.01209722,0.6096246,0.0000983789,0.0007780317,0.3203436,0.00176545,0.0001646555,0.0001110452,0.002033384,0.04708657,0.0001973412],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9811597,0.0003698391,0.0003397911,0.01173599,0.0001107218,0.0001119645,0.000001275864,0.00001162656,0.006159075],"genre_scores_gemma":[0.9942104,0.002662861,0.001010054,0.0008227818,0.0006375676,0.000003911329,8.656853e-7,0.00001392917,0.0006376056],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2705615,"threshold_uncertainty_score":0.4887066,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2807088563","doi":"10.1158/2159-8290.cd-18-0349","title":"Organoid Profiling Identifies Common Responders to Chemotherapy in Pancreatic Cancer","year":2018,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1094,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University Health Network; Princess Margaret Cancer Centre; University of Toronto; Ontario Institute for Cancer Research","funders":"National Center for Advancing Translational Sciences; National Cancer Institute; National Institutes of Health; Lustgarten Foundation","keywords":"Pancreatic cancer; Medicine; Precision medicine; Malignancy; Oncology; Chemotherapy; Cancer; Transcriptome; Gene expression profiling; Internal medicine; Bioinformatics; Cancer research; Biology; Pathology; Gene; Gene expression","authors":[{"name":"Hervé Tiriac","is_ca":false},{"name":"Pascal Belleau","is_ca":false},{"name":"Dannielle D. Engle","is_ca":false},{"name":"Dennis Plenker","is_ca":false},{"name":"Astrid Deschênes","is_ca":false},{"name":"Tim D.D. Somerville","is_ca":false},{"name":"Fieke E. M. Froeling","is_ca":false},{"name":"Richard A. Burkhart","is_ca":false},{"name":"Robert E. Denroche","is_ca":true},{"name":"Gun-Ho Jang","is_ca":true},{"name":"Koji Miyabayashi","is_ca":false},{"name":"C. Megan Young","is_ca":false},{"name":"Hardik J. Patel","is_ca":false},{"name":"Michelle Ma","is_ca":false},{"name":"Joseph F. LaComb","is_ca":false},{"name":"Randze Lerie D. Palmaira","is_ca":false},{"name":"Ammar A. Javed","is_ca":false},{"name":"Jasmine C. Huynh","is_ca":false},{"name":"Molly Johnson","is_ca":false},{"name":"Kanika Arora","is_ca":false},{"name":"Nicolas Robine","is_ca":false},{"name":"Minita Shah","is_ca":false},{"name":"Rashesh Sanghvi","is_ca":false},{"name":"Austin Goetz","is_ca":false},{"name":"Cinthya Y. Lowder","is_ca":false},{"name":"Laura Martello","is_ca":false},{"name":"Else Driehuis","is_ca":false},{"name":"Nicolas Lecomte","is_ca":false},{"name":"Gökçe Aşkan","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Hans Clevers","is_ca":false},{"name":"Laura D. Wood","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Elizabeth D. Thompson","is_ca":false},{"name":"Andrew J. Aguirre","is_ca":false},{"name":"Brian M. Wolpin","is_ca":false},{"name":"Aaron R. Sasson","is_ca":false},{"name":"Joseph Kim","is_ca":false},{"name":"Maoxin Wu","is_ca":false},{"name":"Juan Carlos Bucobo","is_ca":false},{"name":"Peter J. Allen","is_ca":false},{"name":"Divyesh V. Sejpal","is_ca":false},{"name":"William H. Nealon","is_ca":false},{"name":"J. D. Sullivan","is_ca":false},{"name":"Jordan M. Winter","is_ca":false},{"name":"Phyllis A. Gimotty","is_ca":false},{"name":"Jean L. Grem","is_ca":false},{"name":"Dominick J. DiMaio","is_ca":false},{"name":"Jonathan M. Buscaglia","is_ca":false},{"name":"Paul M. Grandgenett","is_ca":false},{"name":"Jonathan R. Brody","is_ca":false},{"name":"Michael A. Hollingsworth","is_ca":false},{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Faiyaz Notta","is_ca":true},{"name":"Edward Kim","is_ca":false},{"name":"James M. Crawford","is_ca":false},{"name":"Craig Devoe","is_ca":false},{"name":"Allyson J. Ocean","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Kenneth H. Yu","is_ca":false},{"name":"Ellen Li","is_ca":false},{"name":"Christopher R. Vakoc","is_ca":false},{"name":"Benjamin Hubert","is_ca":false},{"name":"Sandra E. Fischer","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Richard A. Moffitt","is_ca":false},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Alexander Krasnitz","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"David A. Tuveson","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03869818411819338,"gpt":0.3906178003824897,"spread":0.3519196162642963,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003205262,0.0001696429,0.0005474311,0.0002227596,0.00008941626,0.00004511491,0.0001526287,0.0001067769,0.0008633147],"category_scores_gemma":[0.0001129776,0.0001406547,0.00005751937,0.0005451781,0.0002492749,0.0001915239,0.00006071502,0.0002148546,0.00008523562],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005792268,"about_ca_system_score_gemma":0.0008492261,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002081363,"about_ca_topic_score_gemma":0.002681603,"domain_scores_codex":[0.9984809,0.00007379051,0.0003033852,0.0003692326,0.0003071517,0.0004655371],"domain_scores_gemma":[0.9991913,0.0001134162,0.00005914224,0.0003641302,0.000112931,0.0001590395],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0019894,0.0001007044,0.9239291,0.0001540126,0.0001293196,0.0000364257,0.001601449,0.000005448941,0.06449403,0.0001061398,0.005509156,0.001944828],"study_design_scores_gemma":[0.003403083,0.0005851173,0.8715243,0.001067134,0.000164505,0.00001249938,0.001406114,0.0002998181,0.1170382,0.0004482407,0.003733134,0.0003178162],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896181,0.001231426,0.0001454759,0.004567871,0.0003104257,0.0007964084,0.00002631726,0.00003672685,0.0032673],"genre_scores_gemma":[0.9806008,0.001091635,0.0002842549,0.00311763,0.0005859518,0.0004067391,0.00001136545,0.0000383417,0.01386322],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05254421,"threshold_uncertainty_score":0.945269,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2013102168","doi":"10.1097/01.pas.0000126675.59108.80","title":"An Illustrated Consensus on the Classification of Pancreatic Intraepithelial Neoplasia and Intraductal Papillary Mucinous Neoplasms","year":2004,"lang":"en","type":"review","venue":"The American Journal of Surgical Pathology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":1076,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"National Cancer Institute","keywords":"Intraductal papillary mucinous neoplasm; Pancreatic Intraepithelial Neoplasia; Medicine; Pathology; Pancreas; Adenocarcinoma; Pancreatic cancer; Pancreatic ductal adenocarcinoma; Cancer; Internal medicine","authors":[{"name":"Ralph H. Hruban","is_ca":true},{"name":"Kyoichi Takaori","is_ca":true},{"name":"David S. Klimstra","is_ca":false},{"name":"Volkan Adsay","is_ca":false},{"name":"Jorge Albores‐Saavedra","is_ca":false},{"name":"Andrew V. Biankin","is_ca":false},{"name":"Sandra A. Biankin","is_ca":false},{"name":"Carolyn C. Compton","is_ca":true},{"name":"Noriyoshi Fukushima","is_ca":false},{"name":"Toru Furukawa","is_ca":false},{"name":"Michael Goggins","is_ca":true},{"name":"Yo Kato","is_ca":false},{"name":"Günter Klöppel","is_ca":true},{"name":"Daniel S. Longnecker","is_ca":false},{"name":"Jütta Lüttges","is_ca":true},{"name":"Anirban Maitra","is_ca":true},{"name":"G. Johan A. Offerhaus","is_ca":false},{"name":"Suguru Yonezawa","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05564702360300125,"gpt":0.3662310206586977,"spread":0.3105839970556965,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.002311083,0.0003825351,0.003439978,0.0002590425,0.0001416501,0.0000157507,0.0003952938,0.0002588909,0.00006955999],"category_scores_gemma":[0.0004563396,0.0001724368,0.0003771127,0.0004935886,0.004182162,0.00002386655,0.00004974364,0.001638531,0.0000140916],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001440221,"about_ca_system_score_gemma":0.001482256,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000396349,"about_ca_topic_score_gemma":0.000002131314,"domain_scores_codex":[0.9948626,0.002576711,0.001357913,0.0003016157,0.000459689,0.0004415],"domain_scores_gemma":[0.9930744,0.003843986,0.001944113,0.000569641,0.0002875964,0.0002803084],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"case_report","study_design_scores_codex":[0.003513312,0.000797028,0.0006237527,0.001952305,0.001338895,0.007301515,0.0008194484,0.000005753413,0.0002569948,0.003085347,0.0001905102,0.9801151],"study_design_scores_gemma":[0.01105739,0.08610405,0.03347723,0.02778924,0.02228218,0.6569414,0.006609565,0.0002921424,0.00003791424,0.003063651,0.1507866,0.001558652],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.6086391,0.3876879,0.00001351544,0.002605669,0.0001075835,0.0006219718,0.00002885739,0.00001106055,0.0002843189],"genre_scores_gemma":[0.1396634,0.8595551,0.000231424,0.0001233728,0.000337912,0.00001527119,0.00001364843,0.00003690499,0.00002299773],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.9785565,"threshold_uncertainty_score":0.9985279,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2100751052","doi":"10.1158/0008-5472.can-08-2819","title":"Epithelial to Mesenchymal Transition Contributes to Drug Resistance in Pancreatic Cancer","year":2009,"lang":"en","type":"article","venue":"Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":862,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Cancer Institute; Public Health Agency of Canada; American Cancer Society","keywords":"Pancreatic cancer; Epithelial–mesenchymal transition; Gemcitabine; Cancer research; Cisplatin; Biology; Gene silencing; Drug resistance; Gene expression profiling; Cancer; Gene expression; Internal medicine; Gene; Medicine; Metastasis; Chemotherapy; Genetics","authors":[{"name":"Thiruvengadam Arumugam","is_ca":false},{"name":"Vijaya Ramachandran","is_ca":false},{"name":"Keith F. Fournier","is_ca":false},{"name":"Huamin Wang","is_ca":false},{"name":"Lauren Marquis","is_ca":false},{"name":"James L. Abbruzzese","is_ca":false},{"name":"Gary E. Gallick","is_ca":false},{"name":"Craig D. Logsdon","is_ca":false},{"name":"David J. McConkey","is_ca":false},{"name":"Woonyoung Choi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05468919991588315,"gpt":0.4353437500200372,"spread":0.380654550104154,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002018524,0.0001835637,0.0006921505,0.0007696343,0.0001876436,0.00004144863,0.0002704411,0.0001353402,0.0007484237],"category_scores_gemma":[0.000666714,0.0001600021,0.00007100211,0.001856587,0.0001652769,0.00007998056,0.00004810577,0.0007230257,0.0001859801],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00139726,"about_ca_system_score_gemma":0.001370192,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002713211,"about_ca_topic_score_gemma":0.008043862,"domain_scores_codex":[0.9965328,0.0003710243,0.0004060017,0.0005741553,0.00097788,0.001138129],"domain_scores_gemma":[0.9979538,0.0003982477,0.00002571528,0.0004295957,0.0006206755,0.0005719719],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.02629748,0.001301545,0.1314036,0.0007563042,0.0003630066,0.001105659,0.01810028,0.000184832,0.5692074,0.007586937,0.215518,0.028175],"study_design_scores_gemma":[0.009428009,0.001501233,0.8418726,0.004057292,0.0001676558,0.00001235239,0.001212545,0.0002749885,0.04993172,0.006375961,0.08454622,0.0006193841],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8890224,0.002550364,0.0002480674,0.10126,0.00009158345,0.001983586,0.00005550498,0.00003644233,0.004752046],"genre_scores_gemma":[0.9765401,0.0008602557,0.000761205,0.0031379,0.0003966275,0.00123435,0.00001089987,0.00002448425,0.0170342],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7104691,"threshold_uncertainty_score":0.8194715,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2986162201","doi":"10.1158/2159-8290.cd-19-0644","title":"Single-Cell RNA Sequencing Reveals Stromal Evolution into LRRC15+ Myofibroblasts as a Determinant of Patient Response to Cancer Immunotherapy","year":2019,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":846,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Microsemi (Canada)","funders":"Genentech","keywords":"Immunotherapy; Stromal cell; Cancer research; Tumor microenvironment; Pancreatic cancer; Cancer-Associated Fibroblasts; Cancer; Cancer immunotherapy; Adenocarcinoma; Biology; Medicine; Internal medicine","authors":[{"name":"Claudia X. Dominguez","is_ca":false},{"name":"Sören Müller","is_ca":false},{"name":"Shilpa Keerthivasan","is_ca":false},{"name":"Hartmut Koeppen","is_ca":false},{"name":"Jeffrey Hung","is_ca":false},{"name":"Sarah Gierke","is_ca":false},{"name":"Beatrice Breart","is_ca":false},{"name":"Oded Foreman","is_ca":false},{"name":"Travis W. Bainbridge","is_ca":false},{"name":"Alessandra Castiglioni","is_ca":false},{"name":"Yasin Şenbabaoğlu","is_ca":false},{"name":"Zora Modrušan","is_ca":true},{"name":"Yuxin Liang","is_ca":true},{"name":"Melissa R. Junttila","is_ca":false},{"name":"Christiaan Klijn","is_ca":false},{"name":"Richard Bourgon","is_ca":false},{"name":"Shannon J. Turley","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01890761537577933,"gpt":0.322110409239435,"spread":0.3032027938636556,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003632865,0.0002116232,0.0006500377,0.0002077257,0.00005353598,0.00002114979,0.0001457194,0.0001350525,0.0003051482],"category_scores_gemma":[0.0001165873,0.0001752487,0.0001351003,0.0002907021,0.0001153129,0.0002206941,0.00008749521,0.0001969809,0.00004832264],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002383009,"about_ca_system_score_gemma":0.002118209,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003429288,"about_ca_topic_score_gemma":0.000140762,"domain_scores_codex":[0.9979877,0.0001920829,0.0004799528,0.0004038939,0.0004804681,0.0004558705],"domain_scores_gemma":[0.9986915,0.0002275747,0.0002139184,0.0004924706,0.0001925311,0.0001820348],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.009316794,0.000137566,0.1237178,0.0002627039,0.00009687386,0.00002887556,0.002184733,0.0001106641,0.8595551,0.00002369521,0.0003268606,0.004238409],"study_design_scores_gemma":[0.009234671,0.01670959,0.354129,0.006294576,0.0003722215,0.0000744813,0.004021139,0.0006293719,0.6032173,0.0004888172,0.003958605,0.0008702112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945993,0.002356037,0.0002479155,0.0005357053,0.0003172321,0.00107045,0.00003709895,0.00003101459,0.0008051895],"genre_scores_gemma":[0.9928543,0.0002365927,0.0006275879,0.0004418468,0.000110084,0.0002237689,0.000004804835,0.00005154352,0.005449492],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2563378,"threshold_uncertainty_score":0.7146436,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2112474929","doi":"10.1038/nrclinonc.2009.236","title":"Advanced pancreatic carcinoma: current treatment and future challenges","year":2010,"lang":"en","type":"review","venue":"Nature Reviews Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":791,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre","funders":"Vedecká Grantová Agentúra MŠVVaŠ SR a SAV","keywords":"Medicine; Pancreatic carcinoma; Current (fluid); Oncology; Carcinoma; Internal medicine; General surgery; Medical physics; Intensive care medicine; Pancreatic cancer; Cancer","authors":[{"name":"Anastasios Stathis","is_ca":true},{"name":"Malcolm J. Moore","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2586644263938099,"gpt":0.5656768351710881,"spread":0.3070124087772783,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","metaepi_broad","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.003356754,0.001090981,0.01606062,0.0002804372,0.0001343759,0.00001426576,0.0003839578,0.006680179,0.0002384555],"category_scores_gemma":[0.002567112,0.0006107615,0.002096934,0.0003250348,0.0006390468,0.00005349973,0.0002077605,0.009004716,0.0003910429],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006607245,"about_ca_system_score_gemma":0.003411668,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003475189,"about_ca_topic_score_gemma":0.00005136085,"domain_scores_codex":[0.9913492,0.002764258,0.003189168,0.001547916,0.0003241464,0.00082534],"domain_scores_gemma":[0.9912366,0.004587481,0.001487672,0.001446061,0.0002173006,0.001024843],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001192093,0.001151523,0.000394328,0.0227324,0.000418354,0.0001843747,0.0000326654,2.367672e-10,6.295235e-8,0.0005705804,0.001367165,0.9730293],"study_design_scores_gemma":[0.002794104,0.005072096,0.0008557924,0.008531133,0.01188583,0.0008782278,0.00001527233,0.000001058549,2.447969e-8,0.00005768947,0.9694681,0.0004407049],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00006408773,0.9796567,0.000001059073,0.002733018,0.00291279,0.006207335,0.00003480858,0.00006244493,0.008327769],"genre_scores_gemma":[0.000002614986,0.9868899,0.002572257,0.0003841073,0.007494962,0.001407577,0.0002207866,0.00009825155,0.0009295216],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9725887,"threshold_uncertainty_score":0.9996344,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2959096163","doi":"10.1001/jamaoncol.2019.1588","title":"Durvalumab With or Without Tremelimumab for Patients With Metastatic Pancreatic Ductal Adenocarcinoma","year":2019,"lang":"en","type":"article","venue":"JAMA Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":765,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Cancer Institute; AstraZeneca","keywords":"Durvalumab; Medicine; Tremelimumab; Gemcitabine; Internal medicine; Population; Combination therapy; Oncology; Surgery; Cancer; Immunotherapy; Ipilimumab; Nivolumab","authors":[{"name":"Eileen M. O’Reilly","is_ca":false},{"name":"Do‐Youn Oh","is_ca":false},{"name":"Neesha C. Dhani","is_ca":true},{"name":"Daniel J. Renouf","is_ca":false},{"name":"Myung Ah Lee","is_ca":false},{"name":"Weijing Sun","is_ca":false},{"name":"George A. Fisher","is_ca":false},{"name":"Aram F. Hezel","is_ca":false},{"name":"Shao-Chun Chang","is_ca":false},{"name":"Gordana Vlahovic","is_ca":false},{"name":"Osamu Takahashi","is_ca":false},{"name":"Yin Yang","is_ca":false},{"name":"David Fitts","is_ca":false},{"name":"Philip Agop Philip","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03113434771125084,"gpt":0.3374684671745833,"spread":0.3063341194633324,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004758944,0.000356475,0.001600925,0.0002350379,0.000128957,0.00002763373,0.0002029873,0.0002343746,0.001157099],"category_scores_gemma":[0.0003592836,0.0002017207,0.000105195,0.0003297795,0.0003390003,0.0001777122,0.00005990702,0.0004048344,0.0002540074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005016271,"about_ca_system_score_gemma":0.001910985,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001037177,"about_ca_topic_score_gemma":0.0001990169,"domain_scores_codex":[0.9972832,0.0002254123,0.0004774306,0.000639767,0.0005701918,0.0008040169],"domain_scores_gemma":[0.9971576,0.001068914,0.0002534012,0.000599848,0.0005828161,0.0003373625],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.03719622,0.001284541,0.9550898,0.0004116548,0.001004683,0.000234411,0.0005609092,0.000003173404,0.00007860424,0.0002030884,0.001238028,0.002694875],"study_design_scores_gemma":[0.06121912,0.0594485,0.8641092,0.0002388933,0.002272729,0.0008651292,0.001035669,0.002014714,0.00003810411,0.00008721192,0.008291462,0.0003792788],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9849966,0.00013624,0.0005196723,0.00148014,0.0001075886,0.004414446,0.00003765801,0.00007738941,0.008230265],"genre_scores_gemma":[0.9660481,0.00003045277,0.02248543,0.000959584,0.0001626792,0.0006446024,0.0001533202,0.00008552009,0.009430312],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09098063,"threshold_uncertainty_score":0.999756,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2073768319","doi":"10.1001/jama.299.9.1019","title":"Fluorouracil vs Gemcitabine Chemotherapy Before and After Fluorouracil-Based Chemoradiation Following Resection of Pancreatic Adenocarcinoma","year":2008,"lang":"en","type":"article","venue":"JAMA","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":749,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"National Cancer Institute","keywords":"Medicine; Gemcitabine; Fluorouracil; Hazard ratio; Adenocarcinoma; Chemotherapy; Internal medicine; Confidence interval; Pancreatic cancer; Chemoradiotherapy; Survival rate; Gastroenterology; Surgery; Oncology; Cancer","authors":[{"name":"William F. Regine","is_ca":false},{"name":"Kathryn Winter","is_ca":false},{"name":"Ross A. Abrams","is_ca":false},{"name":"Howard Safran","is_ca":false},{"name":"John P. Hoffman","is_ca":false},{"name":"André Konski","is_ca":false},{"name":"Al B. Benson","is_ca":false},{"name":"John S. Macdonald","is_ca":false},{"name":"Mahesh Kudrimoti","is_ca":false},{"name":"Mitchel Fromm","is_ca":false},{"name":"Michael G. Haddock","is_ca":false},{"name":"Paul Schaefer","is_ca":false},{"name":"Christopher G. Willett","is_ca":false},{"name":"Tyvin A. Rich","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01782689698889571,"gpt":0.2832300540011901,"spread":0.2654031570122943,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004398014,0.0001835586,0.0006335839,0.0002057805,0.0001216821,0.00001263179,0.00006816166,0.0002254113,0.0001902587],"category_scores_gemma":[0.0003968962,0.0001554177,0.0001423366,0.0002854633,0.0001601985,0.0001723345,0.00002426161,0.0002544309,0.00001659633],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001586429,"about_ca_system_score_gemma":0.0002524286,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001722659,"about_ca_topic_score_gemma":0.00003713227,"domain_scores_codex":[0.9984484,0.00009084082,0.0003811184,0.000299574,0.0004588694,0.0003211737],"domain_scores_gemma":[0.9990116,0.0001699653,0.0001191605,0.0003361265,0.0001873687,0.0001757574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002925,0.0001593665,0.9828297,0.000235799,0.0001628218,0.0001723324,0.001040616,0.000001215981,0.003822408,0.00001171312,0.0004097077,0.008229299],"study_design_scores_gemma":[0.008013367,0.001854324,0.9798725,0.0001620504,0.0002128045,0.0001752887,0.0001085864,0.003920423,0.005283492,0.0000687965,0.0002062212,0.00012213],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945402,0.0008586607,0.0002615882,0.002661277,0.00005828146,0.0005573588,0.000007645581,0.00004752428,0.00100745],"genre_scores_gemma":[0.9944375,0.0001627975,0.00320997,0.0004945409,0.0002508657,0.00009899258,0.00004222398,0.00003129836,0.001271874],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00810717,"threshold_uncertainty_score":0.6337749,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2999027176","doi":"10.1038/s41588-019-0566-9","title":"Transcription phenotypes of pancreatic cancer are driven by genomic events during tumor evolution","year":2020,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":689,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre; Canada's Michael Smith Genome Sciences Centre; University of British Columbia; Pancreas Centre (Canada); Vancouver General Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; University Health Network; Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"","keywords":"Biology; Transcriptome; KRAS; Pancreatic cancer; Genetics; Genome instability; Genetic heterogeneity; Chromothripsis; Phenotype; Genome; Gene; Tumor progression; Comparative genomic hybridization; Chromosome instability; Computational biology; Cancer; Mutation; Gene expression; DNA; Chromosome","authors":[{"name":"Michelle Chan‐Seng‐Yue","is_ca":true},{"name":"Jaeseung Kim","is_ca":true},{"name":"Gavin W. Wilson","is_ca":true},{"name":"Karen Ng","is_ca":true},{"name":"Eugenia Flores‐Figueroa","is_ca":true},{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Ashton A. Connor","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Robert C. Grant","is_ca":true},{"name":"Jessica McLeod","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Gun Ho Jang","is_ca":true},{"name":"Amy Zhang","is_ca":true},{"name":"Anna Dodd","is_ca":true},{"name":"Sheng‐Ben Liang","is_ca":true},{"name":"Ayelet Borgida","is_ca":true},{"name":"Dianne Chadwick","is_ca":true},{"name":"Sangeetha Kalimuthu","is_ca":true},{"name":"Ilinca M. Lungu","is_ca":true},{"name":"John M.S. Bartlett","is_ca":true},{"name":"Paul M. Krzyzanowski","is_ca":true},{"name":"Vandana Sandhu","is_ca":true},{"name":"Hervé Tiriac","is_ca":false},{"name":"Fieke E. M. Froeling","is_ca":false},{"name":"Joanna M. Karasinska","is_ca":true},{"name":"James T. Topham","is_ca":true},{"name":"Daniel J. Renouf","is_ca":true},{"name":"David F. Schaeffer","is_ca":true},{"name":"Steven J.M. Jones","is_ca":true},{"name":"Marco A. Marra","is_ca":true},{"name":"Janessa Laskin","is_ca":false},{"name":"Runjan Chetty","is_ca":true},{"name":"Lincoln Stein","is_ca":true},{"name":"George Zogopoulos","is_ca":true},{"name":"Benjamin Haibe‐Kains","is_ca":true},{"name":"Peter J. Campbell","is_ca":false},{"name":"David A. Tuveson","is_ca":false},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Sandra E. Fischer","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Faiyaz Notta","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01687609019782679,"gpt":0.3000861783805061,"spread":0.2832100881826793,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006740043,0.0001257036,0.0004015034,0.00004950856,0.00005201394,0.000003020548,0.000105093,0.0002161233,0.0001484076],"category_scores_gemma":[0.00008458952,0.0001122449,0.00007422656,0.0001720476,0.00006005014,0.00002178079,0.0000243903,0.0004325427,0.00001512776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001802729,"about_ca_system_score_gemma":0.0001930214,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002863214,"about_ca_topic_score_gemma":0.00001737465,"domain_scores_codex":[0.9989191,0.000050997,0.0002448929,0.0002299763,0.0003065045,0.0002485644],"domain_scores_gemma":[0.9994066,0.00002335118,0.0001136575,0.0001544758,0.0001292329,0.0001726604],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003204813,0.00006393776,0.6732329,0.0003572932,0.0001264237,0.000008119871,0.0003169611,0.0000378251,0.3245887,0.000006619018,0.0007662775,0.0001745389],"study_design_scores_gemma":[0.001834125,0.0002766868,0.9754348,0.0001465629,0.0004308704,0.000009978946,0.0001421933,0.002311372,0.01865373,0.00005257487,0.0005979895,0.0001091442],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9843342,0.01337822,0.0002268088,0.001236471,0.00009982408,0.0004278444,0.00007585594,0.00002642728,0.0001943473],"genre_scores_gemma":[0.9970379,0.001015933,0.0009901534,0.000358268,0.0002787418,0.00002478902,0.00002733362,0.00002261707,0.0002442649],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3059349,"threshold_uncertainty_score":0.4577216,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4233651632","doi":"10.1016/s2468-1253(19)30347-4","title":"The global, regional, and national burden of pancreatic cancer and its attributable risk factors in 195 countries and territories, 1990–2017: a systematic analysis for the Global Burden of Disease Study 2017","year":2019,"lang":"en","type":"article","venue":"The Lancet. Gastroenterology & hepatology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":672,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Đại học Quốc gia Hà Nội; Applied Molecular Biosciences Unit; I.M. Sechenov First Moscow State Medical University; University of Gondar; University of Tabriz; Universidade do Porto; Baki Dövlət Universiteti; Babol University of Medical Sciences; Baqiyatallah University of Medical Sciences; National Center of Neurology and Psychiatry; Islamic Azad University; Universitetet i Bergen; Laboratório Associado para a Química Verde; Golestan University of Medical Sciences; Seoul National University Hospital; Seoul National University; University of Toronto; Bauman Moscow State Technical University; Fundação para a Ciência e a Tecnologia; Bill and Melinda Gates Foundation; Tabriz University of Medical Sciences; Public Health Agency; Mansoura University; Public Health Agency of Canada; McGill University; Fuel Cell Technologies Program; Sharif University of Technology; Duke Global Health Institute, Duke University; Trường Đại học Duy Tân; Iran University of Medical Sciences; Wuhan University; Instituto de Salud Carlos III; Ministério da Ciência, Tecnologia e Ensino Superior; Rede de Química e Tecnologia; Generalitat Valenciana; University of Washington; Università di Catania","keywords":"Medicine; Pancreatic cancer; Incidence (geometry); Demography; Cancer; Environmental health; Disease burden; Cancer registry; Mortality rate; Burden of disease; Disease; Body mass index; Gerontology; Internal medicine; Population","authors":[{"name":"Akram Pourshams","is_ca":false},{"name":"Sadaf G Sepanlou","is_ca":false},{"name":"Kevin S Ikuta","is_ca":false},{"name":"Catherine Bisignano","is_ca":false},{"name":"Saeid Safiri","is_ca":false},{"name":"Gholamreza Roshandel","is_ca":false},{"name":"Mehdi Sharif","is_ca":false},{"name":"Morteza Khatibian","is_ca":false},{"name":"Christina Fitzmaurice","is_ca":false},{"name":"Molly R Nixon","is_ca":false},{"name":"Nooshin Abbasi","is_ca":false},{"name":"Mohsen Afarideh","is_ca":false},{"name":"Elham Ahmadian","is_ca":false},{"name":"Tomi Akinyemiju","is_ca":false},{"name":"Fares Alahdab","is_ca":false},{"name":"Shazia Alam","is_ca":false},{"name":"Vahid Alipour","is_ca":false},{"name":"Christine A. Allen","is_ca":false},{"name":"Nahla Anber","is_ca":false},{"name":"Alireza Ansari‐Moghaddam","is_ca":false},{"name":"Jalal Arabloo","is_ca":false},{"name":"Alaa Badawi","is_ca":false},{"name":"Mojtaba Bagherzadeh","is_ca":false},{"name":"Yaschilal Muche Belayneh","is_ca":false},{"name":"Belete Biadgo","is_ca":false},{"name":"Ali Bijani","is_ca":false},{"name":"Antonio Biondi","is_ca":false},{"name":"Tone Bjørge","is_ca":false},{"name":"Antonio Maria Borzì","is_ca":false},{"name":"Cristina Bosetti","is_ca":false},{"name":"Andrey Briko","is_ca":false},{"name":"Н. И. Брико","is_ca":false},{"name":"Giulia Carreras","is_ca":false},{"name":"Félix Carvalho","is_ca":false},{"name":"Jee-Young Jasmine Choi","is_ca":false},{"name":"Dinh‐Toi Chu","is_ca":false},{"name":"Anh Kim Dang","is_ca":false},{"name":"Ahmad Daryani","is_ca":false},{"name":"Dragoş Virgil Daviţoiu","is_ca":false},{"name":"Gebre Teklemariam Demoz","is_ca":false},{"name":"Rupak Desai","is_ca":false},{"name":"Subhojit Dey","is_ca":false},{"name":"Hoa Do","is_ca":false},{"name":"Huyen Phuc","is_ca":false},{"name":"Aziz Eftekhari","is_ca":false},{"name":"Alireza Esteghamati","is_ca":false},{"name":"Farshad Farzadfar","is_ca":false},{"name":"Eduarda Fernandes","is_ca":false},{"name":"Irina Filip","is_ca":false},{"name":"Florian Fischer","is_ca":false},{"name":"Masoud Foroutan","is_ca":false},{"name":"Mohamed M. Gad","is_ca":false},{"name":"Silvano Gallus","is_ca":false},{"name":"Birhanu Geta","is_ca":false},{"name":"Giuseppe Gorini","is_ca":false},{"name":"Nima Hafezi‐Nejad","is_ca":false},{"name":"James Harvey","is_ca":false},{"name":"Milad Hasankhani","is_ca":false},{"name":"Amir Hasanzadeh","is_ca":false},{"name":"Soheil Hassanipour","is_ca":false},{"name":"Simon I Hay","is_ca":false},{"name":"Hagos D Hidru","is_ca":false},{"name":"Chi Linh Hoang","is_ca":false},{"name":"Sorin Hostiuc","is_ca":false},{"name":"Mowafa Househ","is_ca":false},{"name":"Olayinka Stephen Ilesanmi","is_ca":false},{"name":"Milena Ilić","is_ca":false},{"name":"Seyed Sina Naghibi Irvani","is_ca":false},{"name":"Nader Jafari Balalami","is_ca":false},{"name":"Spencer L James","is_ca":false},{"name":"Farahnaz Joukar","is_ca":false},{"name":"Amir Kasaeian","is_ca":false},{"name":"Tesfaye Kassa","is_ca":false},{"name":"André Pascal Kengne","is_ca":false},{"name":"Rovshan Khalilov","is_ca":false},{"name":"Ejaz Ahmad Khan","is_ca":false},{"name":"Amir M Khater","is_ca":false},{"name":"Fatemeh Khosravi Shadmani","is_ca":false},{"name":"Jonathan Kocarnik","is_ca":false},{"name":"Hamidreza Komaki","is_ca":false},{"name":"Ai Koyanagi","is_ca":false},{"name":"Vivek Kumar","is_ca":false},{"name":"Carlo La Vecchia","is_ca":false},{"name":"Platon D Lopukhov","is_ca":false},{"name":"Farzad Manafi","is_ca":false},{"name":"Navid Manafi","is_ca":false},{"name":"Ana-Laura Manda","is_ca":false},{"name":"Fariborz Mansour‐Ghanaei","is_ca":false},{"name":"Dhruv Mehta","is_ca":false},{"name":"Varshil Mehta","is_ca":false},{"name":"Toni Meier","is_ca":false},{"name":"Hagazi Gebre Meles","is_ca":false},{"name":"Getnet Mengistu","is_ca":false},{"name":"Tomasz Miazgowski","is_ca":false},{"name":"Mehdi Mohamadnejad","is_ca":false},{"name":"Abdollah Mohammadian-Hafshejani","is_ca":false},{"name":"Milad Mohammadoo-Khorasani","is_ca":false},{"name":"Shafiu Mohammed","is_ca":false},{"name":"Farnam Mohebi","is_ca":false},{"name":"Ali H. Mokdad","is_ca":false},{"name":"Lorenzo Monasta","is_ca":false},{"name":"Maryam Moossavi","is_ca":false},{"name":"Rahmatollah Moradzadeh","is_ca":false},{"name":"Gurudatta Naik","is_ca":false},{"name":"Ionuţ Negoi","is_ca":false},{"name":"Cuong Tat Nguyen","is_ca":false},{"name":"Long Hoang Nguyen","is_ca":false},{"name":"Trang Huyen Nguyen","is_ca":false},{"name":"Andrew T Olagunju","is_ca":false},{"name":"Tinuke O Olagunju","is_ca":false},{"name":"Alyssa Pennini","is_ca":false},{"name":"Mohammad Rabiee","is_ca":false},{"name":"Navid Rabiee","is_ca":false},{"name":"Amir Radfar","is_ca":false},{"name":"Mahdi Rahimi","is_ca":false},{"name":"Goura Kishor Rath","is_ca":false},{"name":"David Laith Rawaf","is_ca":false},{"name":"Salman Rawaf","is_ca":false},{"name":"Robert C. Reiner","is_ca":false},{"name":"Nima Rezaei","is_ca":false},{"name":"Aziz Rezapour","is_ca":false},{"name":"Anas M. Saad","is_ca":false},{"name":"Seyedmohammad Saadatagah","is_ca":false},{"name":"Amirhossein Sahebkar","is_ca":false},{"name":"Hamideh Salimzadeh","is_ca":false},{"name":"Abdallah M Samy","is_ca":false},{"name":"Juan Sanabria","is_ca":false},{"name":"Arash Sarveazad","is_ca":false},{"name":"Monika Sawhney","is_ca":false},{"name":"Mario Šekerija","is_ca":false},{"name":"P. I. Shabalkin","is_ca":false},{"name":"Masood Ali Shaikh","is_ca":false},{"name":"Rajesh Sharma","is_ca":false},{"name":"Sara Sheikhbahaei","is_ca":false},{"name":"Reza Shirkoohi","is_ca":false},{"name":"Sudeep K Siddappa Malleshappa","is_ca":false},{"name":"Mekonnen Sisay","is_ca":false},{"name":"Kjetil Søreide","is_ca":false},{"name":"Sergey Soshnikov","is_ca":false},{"name":"Rasoul Sotoudehmanesh","is_ca":false},{"name":"Vladimir I. Starodubov","is_ca":false},{"name":"Michelle Subart","is_ca":false},{"name":"Rafael Tabarés‐Seisdedos","is_ca":false},{"name":"Degena Bahrey Tadesse","is_ca":false},{"name":"Eugenio Traini","is_ca":false},{"name":"Bach Xuan Tran","is_ca":false},{"name":"Khanh Bao Tran","is_ca":false},{"name":"Irfan Ullah","is_ca":false},{"name":"Marco Vacante","is_ca":false},{"name":"Amir Vahedian‐Azimi","is_ca":false},{"name":"Elena A. Varavikova","is_ca":false},{"name":"Ronny Westerman","is_ca":false},{"name":"Dawit Dawit Zewdu Wondafrash","is_ca":false},{"name":"Rixing Xu","is_ca":false},{"name":"Naohiro Yonemoto","is_ca":false},{"name":"Vesna Zadnik","is_ca":false},{"name":"Zhi‐Jiang Zhang","is_ca":false},{"name":"Reza Malekzadeh","is_ca":false},{"name":"Mohsen Naghavi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04019376759678434,"gpt":0.344782914913395,"spread":0.3045891473166106,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001516518,0.0002579477,0.001836399,0.0001024078,0.0002757219,0.00002435634,0.000345266,0.0001355942,0.0000111767],"category_scores_gemma":[0.0004743219,0.0001378692,0.0001095109,0.0002603318,0.001016803,0.00006070343,0.0002003795,0.0002334904,9.747837e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001910134,"about_ca_system_score_gemma":0.0003129189,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008924808,"about_ca_topic_score_gemma":0.01211128,"domain_scores_codex":[0.9971874,0.0007076022,0.0007072426,0.0004290534,0.0003982744,0.0005704574],"domain_scores_gemma":[0.9962485,0.002222117,0.0005429324,0.000496268,0.0003542783,0.0001358981],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003413222,0.00009111727,0.9908669,0.001126898,0.003013313,0.00000854709,0.0005849836,0.00005534396,0.000004835864,0.0004651842,0.0003622751,0.000007408385],"study_design_scores_gemma":[0.004183587,0.001239021,0.9717085,0.0002268387,0.004034251,0.00007295729,0.001964201,0.01567155,6.055999e-7,0.0004993778,0.0003217186,0.0000773407],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9822952,0.009551091,0.00006100489,0.004741357,0.0001324873,0.002406818,0.0007847538,0.000009611567,0.00001768206],"genre_scores_gemma":[0.9955697,0.003563383,0.00002496331,0.0001829817,0.0001244325,0.0004302069,0.0000315679,0.000008821633,0.00006391396],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01915832,"threshold_uncertainty_score":0.9976748,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2069376956","doi":"10.1038/nm.3686","title":"Elevation of circulating branched-chain amino acids is an early event in human pancreatic adenocarcinoma development","year":2014,"lang":"en","type":"article","venue":"Nature Medicine","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":662,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute on Aging; Howard Hughes Medical Institute","keywords":"Pancreatic cancer; Internal medicine; Cancer; Pancreas; Endocrinology; Disease; Medicine; Adenocarcinoma; KRAS; Biology; Oncology; Colorectal cancer","authors":[{"name":"Jared R. Mayers","is_ca":false},{"name":"Chen Wu","is_ca":false},{"name":"Clary B. Clish","is_ca":false},{"name":"Peter Kraft","is_ca":false},{"name":"Margaret E. Torrence","is_ca":false},{"name":"Brian P. Fiske","is_ca":false},{"name":"Chen Yuan","is_ca":false},{"name":"Ying Bao","is_ca":false},{"name":"Mary K. Townsend","is_ca":false},{"name":"Shelley S. Tworoger","is_ca":false},{"name":"Shawn M. Davidson","is_ca":false},{"name":"Thales Papagiannakopoulos","is_ca":false},{"name":"Annan Yang","is_ca":false},{"name":"Talya L. Dayton","is_ca":false},{"name":"Shuji Ogino","is_ca":false},{"name":"Meir J. Stampfer","is_ca":false},{"name":"Edward L. Giovannucci","is_ca":false},{"name":"Zhi Rong Qian","is_ca":false},{"name":"Douglas A. Rubinson","is_ca":false},{"name":"Jing Ma","is_ca":false},{"name":"Howard D. Sesso","is_ca":false},{"name":"John Michael Gaziano","is_ca":false},{"name":"Barbara B. Cochrane","is_ca":false},{"name":"Simin Liu","is_ca":false},{"name":"Jean Wactawski‐Wende","is_ca":false},{"name":"JoAnn E. Manson","is_ca":false},{"name":"Michaël Pollak","is_ca":true},{"name":"Alec C. Kimmelman","is_ca":false},{"name":"Amanda Souza","is_ca":false},{"name":"Kerry A. Pierce","is_ca":false},{"name":"Thomas J. Wang","is_ca":false},{"name":"Robert E. Gerszten","is_ca":false},{"name":"Charles S. Fuchs","is_ca":false},{"name":"Matthew G. Vander Heiden","is_ca":false},{"name":"Brian M. Wolpin","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02869475089696376,"gpt":0.3517657082771387,"spread":0.3230709573801749,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001792763,0.0002253899,0.0009125316,0.0004508747,0.00009123364,0.000004299729,0.0001658994,0.0004458849,0.000310248],"category_scores_gemma":[0.0009170367,0.0001742929,0.00005046251,0.0004773933,0.0001968338,0.0000777208,0.00004065395,0.0008828499,0.000009213376],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002207535,"about_ca_system_score_gemma":0.0001987343,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000252038,"about_ca_topic_score_gemma":0.00006987865,"domain_scores_codex":[0.9973663,0.0002041449,0.000793814,0.0003996859,0.0008327882,0.0004032741],"domain_scores_gemma":[0.998594,0.0002557329,0.0002228614,0.0004527158,0.0002529098,0.0002218069],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001266918,0.0001850791,0.9465596,0.0003179916,0.00007050144,0.00003238467,0.005255375,0.000001364959,0.03978708,0.0008394335,0.00009899216,0.006725525],"study_design_scores_gemma":[0.004159609,0.001349536,0.9857432,0.0008896585,0.0001392663,0.00003495619,0.0004110748,0.001535944,0.0048636,0.000481312,0.0002484962,0.0001433645],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993502,0.0009123934,0.001062612,0.001202235,0.00008708925,0.0006030146,0.000001202013,0.00003364935,0.002595767],"genre_scores_gemma":[0.9960333,0.00001652091,0.001904387,0.0008416806,0.0003640575,0.0000413655,0.00008216644,0.00002813775,0.0006884568],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0391836,"threshold_uncertainty_score":0.7107458,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2780727948","doi":"10.1158/1078-0432.ccr-17-2994","title":"Genomics-Driven Precision Medicine for Advanced Pancreatic Cancer: Early Results from the COMPASS Trial","year":2017,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":636,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Ontario Institute for Cancer Research; University of Toronto; University Health Network; BC Cancer Agency; Princess Margaret Cancer Centre","funders":"Canadian Cancer Society Research Institute; National Cancer Institute; Canadian Friends of Tel Aviv University; Ontario Institute for Cancer Research; Division of Cancer Prevention, National Cancer Institute","keywords":"Pancreatic cancer; Transcriptome; Medicine; Clinical endpoint; Oncology; FOLFIRINOX; Biopsy; Cancer; Precision medicine; Internal medicine; Biology; Pathology; Gene; Clinical trial; Gene expression; Genetics","authors":[{"name":"Kyaw Aung","is_ca":true},{"name":"Sandra E. Fischer","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Gun-Ho Jang","is_ca":true},{"name":"Anna Dodd","is_ca":true},{"name":"Sean Creighton","is_ca":true},{"name":"Bernadette Southwood","is_ca":true},{"name":"Sheng‐Ben Liang","is_ca":true},{"name":"Dianne Chadwick","is_ca":true},{"name":"Amy Zhang","is_ca":true},{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Hamzeh Albaba","is_ca":true},{"name":"Shari Moura","is_ca":true},{"name":"Robert C. Grant","is_ca":true},{"name":"Jessica K. Miller","is_ca":true},{"name":"Faridah Mbabaali","is_ca":true},{"name":"Danielle Pasternack","is_ca":true},{"name":"Ilinca M. Lungu","is_ca":true},{"name":"John M.S. Bartlett","is_ca":true},{"name":"Sangeet Ghai","is_ca":true},{"name":"Mathieu Lemire","is_ca":true},{"name":"Spring Holter","is_ca":true},{"name":"Ashton A. Connor","is_ca":true},{"name":"Richard A. Moffitt","is_ca":false},{"name":"Jen Jen Yeh","is_ca":false},{"name":"Lee E. Timms","is_ca":true},{"name":"Paul M. Krzyzanowski","is_ca":true},{"name":"Neesha C. Dhani","is_ca":true},{"name":"David W. Hedley","is_ca":true},{"name":"Faiyaz Notta","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Jennifer J. Knox","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.4546718383273811,"gpt":0.6054100502091737,"spread":0.1507382118817926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","sts"],"consensus_categories":["sts"],"category_scores_codex":[0.009345494,0.0002572011,0.001490176,0.0001038686,0.001575148,0.0001227029,0.001518534,0.0003956417,0.0005951469],"category_scores_gemma":[0.02517926,0.0001522707,0.0003027052,0.0001666618,0.002907869,0.0001337772,0.0005185443,0.001717381,0.00009498359],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005090208,"about_ca_system_score_gemma":0.002223183,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01544387,"about_ca_topic_score_gemma":0.002625958,"domain_scores_codex":[0.9941498,0.0009769722,0.001451324,0.001018816,0.001400565,0.001002496],"domain_scores_gemma":[0.9753895,0.01999957,0.0004898312,0.002333515,0.00117107,0.0006164634],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"observational","study_design_scores_codex":[0.4804159,0.0005797304,0.2598328,0.00009529071,0.0009000637,0.00005767238,0.001040208,0.000009903395,0.001207898,0.0002404368,0.120811,0.1348091],"study_design_scores_gemma":[0.2097079,0.008330631,0.636948,0.001328687,0.0005641895,0.000002365852,0.0003414022,0.002730445,0.0001707699,0.002975018,0.1366368,0.0002637125],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9203951,0.002081472,0.0001088744,0.06685285,0.00132314,0.005209549,0.0004783419,0.00003625708,0.003514456],"genre_scores_gemma":[0.9663473,0.01340186,0.001041471,0.0006286595,0.008760463,0.002379405,0.0001018433,0.00006590853,0.007273089],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3771153,"threshold_uncertainty_score":0.9998056,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2102413929","doi":"10.1038/ng.522","title":"A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33","year":2010,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":614,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Cancer Care Ontario; Mount Sinai Hospital","funders":"National Cancer Institute; National Institutes of Health; Mayo Clinic","keywords":"Single-nucleotide polymorphism; Biology; Locus (genetics); Genetics; Allele; Genome-wide association study; Genotype; Odds ratio; SNP; Pancreatic cancer; Internal medicine; Cancer; Gene; Medicine","authors":[{"name":"Gloria M. Petersen","is_ca":false},{"name":"Laufey T. Ámundadóttir","is_ca":false},{"name":"Charles S. Fuchs","is_ca":false},{"name":"Peter Kraft","is_ca":false},{"name":"Rachael Z. Stolzenberg‐Solomon","is_ca":false},{"name":"Kevin B. Jacobs","is_ca":false},{"name":"Alan A. Arslan","is_ca":false},{"name":"H. Bas Bueno‐de‐Mesquita","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"Myron D. Gross","is_ca":false},{"name":"Kathy J. Helzlsouer","is_ca":false},{"name":"Elizabeth A. Holly","is_ca":false},{"name":"Eric J. Jacobs","is_ca":false},{"name":"Alison P. Klein","is_ca":false},{"name":"Andrea Z. LaCroix","is_ca":false},{"name":"Donghui Li","is_ca":false},{"name":"Margaret T. Mandelson","is_ca":false},{"name":"Sara H. Olson","is_ca":false},{"name":"Harvey A. Risch","is_ca":false},{"name":"Wei Zheng","is_ca":false},{"name":"Demetrius Albanes","is_ca":false},{"name":"William R. Bamlet","is_ca":false},{"name":"Christine D. Berg","is_ca":false},{"name":"Marie‐Christine Boutron‐Ruault","is_ca":false},{"name":"Julie E. Buring","is_ca":false},{"name":"Paige M. Bracci","is_ca":false},{"name":"Federico Canzian","is_ca":false},{"name":"Sandra Clipp","is_ca":false},{"name":"Michelle Cotterchio","is_ca":true},{"name":"Mariza de Andrade","is_ca":false},{"name":"Eric J. Duell","is_ca":false},{"name":"J. Michael Gaziano","is_ca":false},{"name":"Edward L. Giovannucci","is_ca":false},{"name":"Michael Goggins","is_ca":false},{"name":"Göran Hallmans","is_ca":false},{"name":"Susan E. Hankinson","is_ca":false},{"name":"Manal M. Hassan","is_ca":false},{"name":"Barbara V. Howard","is_ca":false},{"name":"David J. Hunter","is_ca":false},{"name":"Amy Hutchinson","is_ca":false},{"name":"Mazda Jenab","is_ca":false},{"name":"Rudolf Kaaks","is_ca":false},{"name":"Charles Kooperberg","is_ca":false},{"name":"Vittorio Krogh","is_ca":false},{"name":"Robert C. Kurtz","is_ca":false},{"name":"Shannon M. Lynch","is_ca":false},{"name":"Robert R. McWilliams","is_ca":false},{"name":"Julie B. Mendelsohn","is_ca":false},{"name":"Dominique S. Michaud","is_ca":false},{"name":"Hemang Parikh","is_ca":false},{"name":"Alpa V. Patel","is_ca":false},{"name":"Petra H. Peeters","is_ca":false},{"name":"Aleksandar Rajkovic","is_ca":false},{"name":"Elio Ríboli","is_ca":false},{"name":"Laudina Rodríguez","is_ca":false},{"name":"Daniela Seminara","is_ca":false},{"name":"Xiao‐Ou Shu","is_ca":false},{"name":"Gilles Thomas","is_ca":false},{"name":"Anne Tjønneland","is_ca":false},{"name":"Geoffrey S. Tobias","is_ca":false},{"name":"Dimitrios Trichopoulos","is_ca":false},{"name":"Stephen K. Van Den Eeden","is_ca":false},{"name":"Jarmo Virtamo","is_ca":false},{"name":"Jean Wactawski‐Wende","is_ca":false},{"name":"Zhaoming Wang","is_ca":false},{"name":"Brian M. Wolpin","is_ca":false},{"name":"Herbert Yu","is_ca":false},{"name":"Kai Yu","is_ca":false},{"name":"Anne Zeleniuch‐Jacquotte","is_ca":false},{"name":"Joseph F. Fraumeni","is_ca":false},{"name":"Robert N. Hoover","is_ca":false},{"name":"Patricia Hartge","is_ca":false},{"name":"Stephen J. Chanock","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01612663654390315,"gpt":0.3442386196704849,"spread":0.3281119831265817,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000878985,0.0002359359,0.0006128495,0.0001357567,0.0001901686,0.00005351425,0.0001528382,0.0006480492,0.0004274273],"category_scores_gemma":[0.001788115,0.0001919535,0.00007480941,0.0002408473,0.0001467,0.00004012169,0.00009590053,0.001569374,0.00004365744],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002836762,"about_ca_system_score_gemma":0.0003171305,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000100973,"about_ca_topic_score_gemma":0.001695165,"domain_scores_codex":[0.997831,0.0001472639,0.0003425313,0.0005061695,0.0007300311,0.000443007],"domain_scores_gemma":[0.9980325,0.0006534532,0.000151172,0.000552222,0.0003845948,0.0002261292],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001415911,0.0004722707,0.9877973,0.00009595266,0.0003162091,0.00003173621,0.0009327609,0.000001219675,0.007899292,0.000008753324,0.001587452,0.0007155151],"study_design_scores_gemma":[0.001770757,0.0008226531,0.992302,0.00002819609,0.0005241874,0.000006003272,0.0004167071,0.00007337125,0.001100331,0.0003062532,0.002480441,0.0001691191],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932296,0.001894221,0.000003338731,0.001569856,0.0004101393,0.001271714,0.00003988222,0.00005361911,0.001527628],"genre_scores_gemma":[0.9926906,0.001014011,0.0003815335,0.0006815262,0.0005575433,0.00009671225,0.00003330313,0.00003068814,0.004514098],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006798961,"threshold_uncertainty_score":0.7827635,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3100629716","doi":"10.1200/jco.20.02672","title":"Systemic Therapy for Advanced Hepatocellular Carcinoma: ASCO Guideline","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":614,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Medicine; Lenvatinib; Sorafenib; Atezolizumab; Nivolumab; Regorafenib; Ramucirumab; Oncology; Bevacizumab; Internal medicine; Pembrolizumab; Hepatocellular carcinoma; Population; Cabozantinib; Cancer; Colorectal cancer; Chemotherapy; Immunotherapy","authors":[{"name":"John D. Gordan","is_ca":false},{"name":"Erin B. Kennedy","is_ca":false},{"name":"Ghassan K. Abou‐Alfa","is_ca":false},{"name":"Muhammad Shaalan Beg","is_ca":false},{"name":"Steven T. Brower","is_ca":false},{"name":"T. Gade","is_ca":false},{"name":"Laura W. Goff","is_ca":false},{"name":"Shilpi Gupta","is_ca":false},{"name":"Jennifer Guy","is_ca":false},{"name":"William Proctor Harris","is_ca":false},{"name":"Renuka Iyer","is_ca":false},{"name":"Ishmael Jaiyesimi","is_ca":false},{"name":"Minaxi Jhawer","is_ca":false},{"name":"Asha Karippot","is_ca":false},{"name":"Ahmed O. Kaseb","is_ca":false},{"name":"Robin Kate Kelley","is_ca":false},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Jeremy Kortmansky","is_ca":false},{"name":"Andrea Leaf","is_ca":false},{"name":"William Remak","is_ca":false},{"name":"Rachna T. Shroff","is_ca":false},{"name":"Davendra Sohal","is_ca":false},{"name":"Tamar H. Taddei","is_ca":false},{"name":"Neeta K. Venepalli","is_ca":false},{"name":"Andrea Wilson","is_ca":false},{"name":"Andrew X. Zhu","is_ca":false},{"name":"Michal G. Rose","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2489958274625802,"gpt":0.5172099093082254,"spread":0.2682140818456452,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004586244,0.0001525632,0.002562736,0.00007789723,0.00004961069,0.000005396513,0.0002521092,0.0004615292,0.0002019359],"category_scores_gemma":[0.009251284,0.0001016221,0.0007174849,0.000143567,0.0001945496,0.00007093855,0.00004297309,0.0009018632,0.00003349611],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001242518,"about_ca_system_score_gemma":0.003656435,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006062301,"about_ca_topic_score_gemma":0.000001043809,"domain_scores_codex":[0.9952445,0.000439421,0.003363637,0.0002371934,0.0003944793,0.0003207812],"domain_scores_gemma":[0.9933881,0.00290216,0.001479417,0.0001991204,0.00125841,0.0007728501],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.03021542,0.001403442,0.7814413,0.0001741502,0.0008834112,0.001375351,0.0002513591,0.00001371026,0.005370928,0.0002216189,0.05263094,0.1260184],"study_design_scores_gemma":[0.08178721,0.1162813,0.08163072,0.0002094873,0.001189323,0.001920068,0.0007544899,0.0164278,0.000754461,0.0006909815,0.698051,0.0003031246],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9455568,0.003815435,0.007710577,0.03977435,0.0006660873,0.0008230102,0.000005509954,0.00001501384,0.001633209],"genre_scores_gemma":[0.959541,0.001946209,0.02388156,0.0113271,0.002952239,0.00001944798,0.000006476295,0.00002573517,0.0003002943],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6998106,"threshold_uncertainty_score":0.9990942,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3199725740","doi":"10.1016/j.cell.2021.08.023","title":"Proteogenomic characterization of pancreatic ductal adenocarcinoma","year":2021,"lang":"en","type":"article","venue":"Cell","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":599,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary; University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"National Institute of Environmental Health Sciences; National Cancer Institute; National Institutes of Health; Rolfe Pancreatic Cancer Foundation","keywords":"Biology; Proteogenomics; Computational biology; Proteomics; Exome sequencing; Carcinogenesis; Pancreatic cancer; microRNA; Cancer research; Adenocarcinoma; Cancer; Bioinformatics; Gene; Genome; Genomics; Genetics; Mutation","authors":[{"name":"Liwei Cao","is_ca":false},{"name":"Chen Huang","is_ca":false},{"name":"Daniel Cui Zhou","is_ca":false},{"name":"Yingwei Hu","is_ca":false},{"name":"T. Mamie Lih","is_ca":false},{"name":"Sara R. Savage","is_ca":false},{"name":"Karsten Krug","is_ca":false},{"name":"David Clark","is_ca":false},{"name":"Michael Schnaubelt","is_ca":false},{"name":"Lijun Chen","is_ca":false},{"name":"Felipe da Veiga Leprevost","is_ca":false},{"name":"Rodrigo Vargas Eguez","is_ca":false},{"name":"Weiming Yang","is_ca":false},{"name":"Jianbo Pan","is_ca":false},{"name":"Bo Wen","is_ca":false},{"name":"Yongchao Dou","is_ca":false},{"name":"Wen Jiang","is_ca":false},{"name":"Yuxing Liao","is_ca":false},{"name":"Zhiao Shi","is_ca":false},{"name":"Nadezhda V. Terekhanova","is_ca":false},{"name":"Song Cao","is_ca":false},{"name":"Rita Jui-Hsien Lu","is_ca":false},{"name":"Yize Li","is_ca":false},{"name":"Ruiyang Liu","is_ca":false},{"name":"Houxiang Zhu","is_ca":false},{"name":"Peter Ronning","is_ca":false},{"name":"Yige Wu","is_ca":false},{"name":"Matthew A. Wyczalkowski","is_ca":false},{"name":"Hariharan Easwaran","is_ca":false},{"name":"Ludmila Danilova","is_ca":false},{"name":"Arvind Singh Mer","is_ca":true},{"name":"Seungyeul Yoo","is_ca":false},{"name":"Joshua M. Wang","is_ca":false},{"name":"Wenke Liu","is_ca":false},{"name":"Benjamin Haibe‐Kains","is_ca":true},{"name":"Mathangi Thiagarajan","is_ca":false},{"name":"Scott D. Jewell","is_ca":false},{"name":"Galen Hostetter","is_ca":false},{"name":"Chelsea J. Newton","is_ca":false},{"name":"Qing Kay Li","is_ca":false},{"name":"Michael H. A. Roehrl","is_ca":false},{"name":"David Fenyö","is_ca":false},{"name":"Pei Wang","is_ca":false},{"name":"Alexey I. Nesvizhskii","is_ca":false},{"name":"D.R. Mani","is_ca":false},{"name":"Gilbert S. Omenn","is_ca":false},{"name":"Emily S. Boja","is_ca":false},{"name":"Mehdi Mesri","is_ca":false},{"name":"Ana I. Robles","is_ca":false},{"name":"Henry Rodriguez","is_ca":false},{"name":"Oliver F. Bathe","is_ca":true},{"name":"Daniel W. Chan","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Li Ding","is_ca":false},{"name":"Bing Zhang","is_ca":false},{"name":"Hui Zhang","is_ca":false},{"name":"Mitual Amin","is_ca":true},{"name":"Eunkyung An","is_ca":false},{"name":"Christina Ayad","is_ca":false},{"name":"Thomas Bauer","is_ca":false},{"name":"Chet Birger","is_ca":false},{"name":"Michael J. Birrer","is_ca":false},{"name":"Simina M. Boca","is_ca":false},{"name":"William Bocik","is_ca":false},{"name":"Melissa Borucki","is_ca":false},{"name":"Shuang Cai","is_ca":false},{"name":"Steven A. Carr","is_ca":false},{"name":"Sandra Cerda","is_ca":false},{"name":"Huan Chen","is_ca":false},{"name":"Steven Chen","is_ca":false},{"name":"David Chesla","is_ca":false},{"name":"Arul M. Chinnaiyan","is_ca":false},{"name":"Antonio Colaprico","is_ca":false},{"name":"Sandra Cottingham","is_ca":false},{"name":"Magdalena Derejska","is_ca":false},{"name":"Saravana M. Dhanasekaran","is_ca":false},{"name":"Marcin J. Domagalski","is_ca":false},{"name":"Brian Druker","is_ca":false},{"name":"Elizabeth R. Duffy","is_ca":false},{"name":"Maureen A. Dyer","is_ca":false},{"name":"Nathan Edwards","is_ca":false},{"name":"Matthew J. Ellis","is_ca":false},{"name":"Jennifer Eschbacher","is_ca":false},{"name":"Alicia Francis","is_ca":false},{"name":"Jesse Francis","is_ca":false},{"name":"Stacey Gabriel","is_ca":false},{"name":"N Gabrovski","is_ca":false},{"name":"Johanna Gardner","is_ca":false},{"name":"Gad Getz","is_ca":false},{"name":"Michael A. Gillette","is_ca":false},{"name":"Charles A. Goldthwaite","is_ca":false},{"name":"Pamela Grady","is_ca":false},{"name":"Shuai Guo","is_ca":false},{"name":"Pushpa Hariharan","is_ca":false},{"name":"Tara Hiltke","is_ca":false},{"name":"Barbara Hindenach","is_ca":false},{"name":"Katherine A. Hoadley","is_ca":false},{"name":"Jasmine Huang","is_ca":false},{"name":"Corbin D. Jones","is_ca":false},{"name":"Karen A. Ketchum","is_ca":false},{"name":"Christopher R. Kinsinger","is_ca":false},{"name":"Jennifer M. Koziak","is_ca":false},{"name":"Katarzyna Kuśnierz","is_ca":false},{"name":"Tao Liu","is_ca":false},{"name":"Jiang Long","is_ca":false},{"name":"David Mallery","is_ca":false},{"name":"Sailaja Mareedu","is_ca":false},{"name":"Ronald Matteotti","is_ca":false},{"name":"Nicollette Maunganidze","is_ca":false},{"name":"Peter B. McGarvey","is_ca":false},{"name":"Parham Minoo","is_ca":false},{"name":"Oxana Paklina","is_ca":false},{"name":"Amanda G. Paulovich","is_ca":false},{"name":"Samuel Payne","is_ca":false},{"name":"Olga Potapova","is_ca":false},{"name":"Barbara L. Pruetz","is_ca":false},{"name":"Liqun Qi","is_ca":false},{"name":"Nancy Roche","is_ca":false},{"name":"Karin Rodland","is_ca":false},{"name":"Daniel C. Rohrer","is_ca":false},{"name":"Eric E. Schadt","is_ca":false},{"name":"Shabunin Av","is_ca":false},{"name":"Troy Shelton","is_ca":false},{"name":"Yvonne Shutack","is_ca":false},{"name":"Shilpi Singh","is_ca":true},{"name":"Michael J. Smith","is_ca":false},{"name":"Richard Smith","is_ca":false},{"name":"Lori J. Sokoll","is_ca":false},{"name":"James Suh","is_ca":false},{"name":"Ratna R. Thangudu","is_ca":false},{"name":"Shirley Tsang","is_ca":false},{"name":"Ki Sung Um","is_ca":false},{"name":"Dana R. Valley","is_ca":false},{"name":"Negin Vatanian","is_ca":false},{"name":"Wenyi Wang","is_ca":false},{"name":"George D. Wilson","is_ca":false},{"name":"Maciej Wiznerowicz","is_ca":false},{"name":"Zhen Zhang","is_ca":false},{"name":"Grace Zhao","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02374331833610348,"gpt":0.2812574691186198,"spread":0.2575141507825163,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009850496,0.00006635087,0.0002966465,0.0000459431,0.00002717602,0.000004025586,0.00004091661,0.00006759965,0.0008950444],"category_scores_gemma":[0.00006023108,0.00005919907,0.00005214171,0.0001278789,0.00006331937,0.00002566602,0.00003223148,0.0000942374,0.0001136927],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003897645,"about_ca_system_score_gemma":0.0003764275,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008623752,"about_ca_topic_score_gemma":6.720095e-7,"domain_scores_codex":[0.9993201,0.00005096088,0.0001910735,0.0001499109,0.0001361191,0.0001518267],"domain_scores_gemma":[0.9994711,0.00003338183,0.00005885981,0.0002246603,0.0001308193,0.00008112141],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005145721,0.0001197485,0.3282575,0.0001820081,0.00002835912,0.0001108785,0.0001468862,3.914652e-8,0.6709539,0.00002796683,0.00003687459,0.00008434658],"study_design_scores_gemma":[0.0008224332,0.0001708101,0.6926028,0.00004070259,0.0001395199,0.0001230757,0.00007374107,0.0001279005,0.3055011,0.00003115703,0.000320497,0.00004623057],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9861597,0.0004140123,0.0001899648,0.0002585704,0.00004521608,0.0003107796,0.000007459138,0.00001330904,0.01260095],"genre_scores_gemma":[0.9881186,0.0001435904,0.0009915007,0.00008044333,0.00009616766,0.0000236045,0.0001023761,0.00001190253,0.01043183],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3654528,"threshold_uncertainty_score":0.9800109,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2000085538","doi":"10.1001/jama.2012.7352","title":"Effect of Adjuvant Chemotherapy With Fluorouracil Plus Folinic Acid or Gemcitabine vs Observation on Survival in Patients With Resected Periampullary Adenocarcinoma","year":2012,"lang":"en","type":"article","venue":"JAMA","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":592,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Institute for Health and Care Research; Cancer Research UK","keywords":"Medicine; Folinic acid; Gemcitabine; Chemotherapy; Fluorouracil; Pancreatic cancer; Internal medicine; Gastroenterology; Adenocarcinoma; Periampullary cancer; Surgery; Cancer","authors":[{"name":"John P. Neoptolemos","is_ca":false},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Trevor F. Cox","is_ca":false},{"name":"Juan W. Valle","is_ca":false},{"name":"Daniel H. Palmer","is_ca":false},{"name":"Ross Carter","is_ca":false},{"name":"Niall C. Tebbutt","is_ca":false},{"name":"David Smith","is_ca":false},{"name":"Bengt Glimelius","is_ca":false},{"name":"Richard Charnley","is_ca":false},{"name":"F Lacaine","is_ca":false},{"name":"Andrew Scarfe","is_ca":false},{"name":"Alan Anthoney","is_ca":false},{"name":"Paula Ghaneh","is_ca":false},{"name":"Christopher Halloran","is_ca":false},{"name":"Markus M. Lerch","is_ca":false},{"name":"Attila Oláh","is_ca":false},{"name":"Charlotte Rawcliffe","is_ca":false},{"name":"Caroline S. Verbeke","is_ca":false},{"name":"Fiona Campbell","is_ca":false},{"name":"Markus W. Büchler","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02626694571328314,"gpt":0.3106259363977092,"spread":0.284358990684426,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009569037,0.0002160599,0.0008231327,0.0001598703,0.00004404112,0.000008181605,0.0001082844,0.0001840549,0.0002382189],"category_scores_gemma":[0.0005336503,0.0001189808,0.00004375256,0.0004179351,0.0001124633,0.0001607835,0.00002830486,0.0003464269,0.00001879198],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002386645,"about_ca_system_score_gemma":0.0002739134,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001341217,"about_ca_topic_score_gemma":0.00006233715,"domain_scores_codex":[0.9979785,0.0003482216,0.0003319598,0.0002463567,0.0006450546,0.0004498916],"domain_scores_gemma":[0.9985037,0.0005492157,0.0001470825,0.0003926949,0.0002355987,0.00017174],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0837042,0.0004823547,0.9072603,0.0002427786,0.0001319048,0.00002644924,0.000641271,0.000001520447,0.0003326091,0.00001127156,0.0001614283,0.007003926],"study_design_scores_gemma":[0.03300946,0.02278143,0.9410332,0.000342365,0.0001148659,0.00001050505,0.00006644928,0.0002274525,0.002205668,0.000001501587,0.00007984063,0.0001273064],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973432,0.0001757528,0.00002618779,0.0004665342,0.00006787179,0.001260437,0.00001083941,0.00002818342,0.0006209519],"genre_scores_gemma":[0.9981787,0.00003472175,0.000675153,0.0001895379,0.0001855557,0.00008176958,0.0001195507,0.00003947187,0.0004955069],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05069474,"threshold_uncertainty_score":0.4851898,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2154574630","doi":"10.1200/jco.2004.12.082","title":"Irinotecan Plus Gemcitabine Results in No Survival Advantage Compared With Gemcitabine Monotherapy in Patients With Locally Advanced or Metastatic Pancreatic Cancer Despite Increased Tumor Response Rate","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":586,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Medicine; Gemcitabine; Irinotecan; Internal medicine; Clinical endpoint; Pancreatic cancer; Gastroenterology; Population; Phases of clinical research; Progression-free survival; Chemotherapy; Oncology; Cancer; Surgery; Randomized controlled trial; Colorectal cancer","authors":[{"name":"Caio M. Rocha Lima","is_ca":true},{"name":"Mark R. Green","is_ca":true},{"name":"Robert Rotche","is_ca":true},{"name":"Wilson H. Miller","is_ca":true},{"name":"G. Mark Jeffrey","is_ca":true},{"name":"Laura A. Cisar","is_ca":true},{"name":"A. Morganti","is_ca":true},{"name":"Nicoletta Orlando","is_ca":true},{"name":"G. Gruia","is_ca":true},{"name":"Langdon L. Miller","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07414236306649465,"gpt":0.4405057419288173,"spread":0.3663633788623226,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.01065793,0.000444582,0.004336614,0.0006365554,0.00006236892,0.00001655461,0.0003609792,0.0002579161,0.0001567474],"category_scores_gemma":[0.01095198,0.0002602753,0.0002004157,0.000891338,0.0006776695,0.0002904907,0.00006247687,0.001808158,0.00001820316],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001656586,"about_ca_system_score_gemma":0.01221661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007833523,"about_ca_topic_score_gemma":0.005871951,"domain_scores_codex":[0.990566,0.003177108,0.003953367,0.0005629958,0.0009178797,0.0008226874],"domain_scores_gemma":[0.9863138,0.009025669,0.002171516,0.0004843996,0.00124315,0.0007615137],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"observational","study_design_scores_codex":[0.5745022,0.003868172,0.4116575,0.00007074449,0.000458773,0.00496904,0.0002158131,0.001639368,0.0001353004,0.000006872925,0.00002780257,0.002448492],"study_design_scores_gemma":[0.2005647,0.06072179,0.7352111,0.001158002,0.0003813796,0.0001125132,0.0002520697,0.0005207072,0.0000282878,0.00003938739,0.0007682057,0.000241856],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940095,0.0002024143,0.0004293151,0.003064798,0.0002382797,0.001669136,0.00004164765,0.00001895713,0.0003259692],"genre_scores_gemma":[0.9778899,0.0004614042,0.01900184,0.002033191,0.0001824744,0.00008930537,0.00001739008,0.00006705985,0.0002574119],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3739375,"threshold_uncertainty_score":0.9999849,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2531887049","doi":"10.1038/nature19823","title":"A renewed model of pancreatic cancer evolution based on genomic rearrangement patterns","year":2016,"lang":"en","type":"article","venue":"Nature","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":547,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; McGill University Health Centre; Sunnybrook Health Science Centre; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Health Sciences Centre; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; Ontario Ministry of Research and Innovation; Hebrew University of Jerusalem; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Hospital for Sick Children; Wellcome Trust","keywords":"Pancreatic cancer; Carcinogenesis; CDKN2A; Biology; Lineage (genetic); Cancer; Cancer research; Chromothripsis; Pancreatic Intraepithelial Neoplasia; KRAS; Somatic evolution in cancer; Mutation; Genetics; Genome instability; Gene; DNA; DNA damage","authors":[{"name":"Faiyaz Notta","is_ca":true},{"name":"Michelle Chan‐Seng‐Yue","is_ca":true},{"name":"Mathieu Lemire","is_ca":true},{"name":"Yilong Li","is_ca":false},{"name":"Gavin W. Wilson","is_ca":true},{"name":"Ashton A. Connor","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Sheng-Ben Liang","is_ca":true},{"name":"Andrew Brown","is_ca":true},{"name":"Jaeseung Kim","is_ca":true},{"name":"Tao Wang","is_ca":true},{"name":"Jared T. Simpson","is_ca":true},{"name":"Timothy Beck","is_ca":true},{"name":"Ayelet Borgida","is_ca":false},{"name":"Nicholas Buchner","is_ca":true},{"name":"Dianne Chadwick","is_ca":true},{"name":"Sara Hafezi‐Bakhtiari","is_ca":true},{"name":"John E. Dick","is_ca":true},{"name":"Lawrence E. Heisler","is_ca":true},{"name":"Michael A. Hollingsworth","is_ca":false},{"name":"Emin Ibrahimov","is_ca":true},{"name":"Gun Ho Jang","is_ca":true},{"name":"Jeremy Johns","is_ca":true},{"name":"Lars Jorgensen","is_ca":true},{"name":"Calvin Law","is_ca":true},{"name":"Olga Ludkovski","is_ca":true},{"name":"Ilinca M. Lungu","is_ca":true},{"name":"Karen Ng","is_ca":true},{"name":"Danielle Pasternack","is_ca":true},{"name":"Gloria M. Petersen","is_ca":false},{"name":"Liran I. Shlush","is_ca":true},{"name":"Lee E. Timms","is_ca":true},{"name":"Ming‐Sound Tsao","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Christina K. Yung","is_ca":true},{"name":"George Zogopoulos","is_ca":true},{"name":"John M.S. Bartlett","is_ca":true},{"name":"Ludmil B. Alexandrov","is_ca":false},{"name":"Francisco X. Real","is_ca":false},{"name":"Sean P. Cleary","is_ca":true},{"name":"Michael H. A. Roehrl","is_ca":true},{"name":"John D. McPherson","is_ca":true},{"name":"Lincoln Stein","is_ca":true},{"name":"Thomas J. Hudson","is_ca":true},{"name":"Peter J. Campbell","is_ca":false},{"name":"Steven Gallinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02722973348533786,"gpt":0.3378341852894211,"spread":0.3106044518040832,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002072814,0.0001010417,0.0003125145,0.0001193354,0.00002970735,0.000001809886,0.00007893993,0.000501157,0.0004143265],"category_scores_gemma":[0.0001338003,0.0000589568,0.00006941264,0.00008183771,0.00005153406,0.00002001742,0.000017924,0.0004396309,0.00001748159],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003830766,"about_ca_system_score_gemma":0.0004778255,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001218664,"about_ca_topic_score_gemma":0.00006369946,"domain_scores_codex":[0.999029,0.00004810133,0.0001700461,0.0002010417,0.0003423634,0.0002093886],"domain_scores_gemma":[0.9992818,0.00010966,0.00006765786,0.0003185628,0.00013131,0.00009101273],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001692923,0.00028182,0.7409201,0.0002513953,0.0001628925,0.00001424148,0.00009772526,0.0001862262,0.2457106,0.0007186636,0.005475229,0.004488115],"study_design_scores_gemma":[0.007666163,0.0009803546,0.8908556,0.001635884,0.0004962784,0.000004712795,0.0000387383,0.08994845,0.006669672,0.000932068,0.0005696137,0.0002024953],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9865282,0.0004481614,0.003832767,0.005338621,0.00006584849,0.0004147805,0.00008783141,0.00002398134,0.003259817],"genre_scores_gemma":[0.9947423,0.0001945847,0.0009995408,0.0007352286,0.0001023953,0.00007154381,0.000009537077,0.00001487903,0.00312998],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.239041,"threshold_uncertainty_score":0.4536585,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2033295037","doi":"10.1016/j.clnu.2012.08.011","title":"Guidelines for perioperative care for pancreaticoduodenectomy: Enhanced Recovery After Surgery (ERAS®) Society recommendations","year":2012,"lang":"en","type":"article","venue":"Clinical Nutrition","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":545,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Perioperative; Pancreaticoduodenectomy; Protocol (science); MEDLINE; Randomized controlled trial; Evidence-based medicine; Evidence-based practice; Intensive care medicine; Surgery; Alternative medicine","authors":[{"name":"Kristoffer Lassen","is_ca":false},{"name":"Mariëlle M.E. Coolsen","is_ca":false},{"name":"K. Slim","is_ca":false},{"name":"Francesco Carli","is_ca":true},{"name":"José Eduardo de Aguilar‐Nascimento","is_ca":false},{"name":"Markus Schäfer","is_ca":false},{"name":"Rowan W. Parks","is_ca":false},{"name":"Kenneth C. H. Fearon","is_ca":false},{"name":"Dileep N. Lobo","is_ca":false},{"name":"Nicolas Demartines","is_ca":false},{"name":"Marco Braga","is_ca":false},{"name":"Olle Ljungqvist","is_ca":false},{"name":"Cornelis H.C. Dejong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2306224302429168,"gpt":0.5096496631958662,"spread":0.2790272329529495,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001357369,0.0001671937,0.0008909749,0.00005775034,0.0002164599,0.00002122365,0.00005305862,0.0003225919,0.0002285419],"category_scores_gemma":[0.004897663,0.0001408729,0.0007426977,0.000117044,0.0001413716,0.0001995872,0.00002611666,0.0001959819,0.00002708543],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001611365,"about_ca_system_score_gemma":0.000287571,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007029902,"about_ca_topic_score_gemma":0.00001015417,"domain_scores_codex":[0.9980204,0.000142268,0.0009144317,0.0003247951,0.0001477354,0.0004503907],"domain_scores_gemma":[0.9934833,0.004344265,0.0001343468,0.0002546798,0.001531425,0.0002519535],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.014099,0.004734958,0.2052227,0.003610313,0.001268695,0.000002808234,0.002607347,7.462431e-7,0.003491911,0.0003331905,0.6434833,0.1211451],"study_design_scores_gemma":[0.02876257,0.006045137,0.1171253,0.00321116,0.002818068,0.00003618815,0.01217057,0.001842836,0.006873508,0.00213888,0.8178474,0.001128424],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8996034,0.006187428,0.06139765,0.02475161,0.001434652,0.005309501,0.000564324,0.0001192619,0.0006322276],"genre_scores_gemma":[0.6634889,0.01170954,0.295736,0.007231398,0.007052921,0.009451595,0.002591803,0.00007476663,0.002663062],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2361145,"threshold_uncertainty_score":0.5863314,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1563283949","doi":"10.1002/cncr.29161","title":"Phase 2 multi‐institutional trial evaluating gemcitabine and stereotactic body radiotherapy for patients with locally advanced unresectable pancreatic adenocarcinoma","year":2014,"lang":"en","type":"article","venue":"Cancer","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":538,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Cancer Institute; Alexander Family Foundation; McKnight Foundation","keywords":"Medicine; Gemcitabine; Common Terminology Criteria for Adverse Events; Pancreatic cancer; Clinical endpoint; Adverse effect; Radiation therapy; Toxicity; Internal medicine; Quality of life (healthcare); Adenocarcinoma; Radiosurgery; Clinical trial; Cancer; Radiology; Gastroenterology","authors":[{"name":"Joseph M. Herman","is_ca":false},{"name":"Daniel T. Chang","is_ca":false},{"name":"Karyn A. Goodman","is_ca":false},{"name":"Avani Satish Dholakia","is_ca":false},{"name":"Siva P. Raman","is_ca":false},{"name":"Amy Hacker‐Prietz","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"M. Griffith","is_ca":false},{"name":"Timothy M. Pawlik","is_ca":false},{"name":"Jonathan Pai","is_ca":false},{"name":"Eileen M. O’Reilly","is_ca":false},{"name":"George A. Fisher","is_ca":false},{"name":"Aaron T. Wild","is_ca":false},{"name":"Lauren M. Rosati","is_ca":false},{"name":"Lei Zheng","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Daniel A. Laheru","is_ca":false},{"name":"Laurie Ann Columbo","is_ca":false},{"name":"Elizabeth A. Sugar","is_ca":false},{"name":"Albert C. Koong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04441011237090429,"gpt":0.4011181487900463,"spread":0.3567080364191419,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004122752,0.0002029453,0.0006011598,0.00009029725,0.000212908,0.00002260335,0.00007356851,0.00008876262,0.0002178008],"category_scores_gemma":[0.0005892149,0.0001383672,0.00005311215,0.0001250124,0.0002151582,0.0001317914,0.00001898878,0.000162639,0.000003217418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002771009,"about_ca_system_score_gemma":0.0006381953,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005884091,"about_ca_topic_score_gemma":0.00002314577,"domain_scores_codex":[0.9984648,0.00009871165,0.000290811,0.0003782325,0.0003695128,0.0003979641],"domain_scores_gemma":[0.9986184,0.0004530566,0.0001193306,0.0002380111,0.0003522529,0.0002190002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.2539217,0.002300876,0.674323,0.0005518348,0.0008290982,0.00001092288,0.0003597821,0.00004092625,0.002528183,0.0002407302,0.0002754415,0.0646175],"study_design_scores_gemma":[0.6654862,0.03482459,0.206476,0.000464971,0.0008111911,0.00001844626,0.00004303483,0.08892372,0.0001368176,0.00005650923,0.002429107,0.0003294666],"study_design_candidate":"randomized_trial","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983261,0.001541548,0.01141635,0.0002369698,0.0001636014,0.00310706,0.00003415977,0.00003068361,0.0002086419],"genre_scores_gemma":[0.9834695,0.0001451204,0.01326927,0.0003283688,0.0004001503,0.001199277,0.00007034718,0.00003525584,0.001082685],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.467847,"threshold_uncertainty_score":0.564245,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3118238647","doi":"10.1101/gr.257246.119","title":"Accurate and efficient detection of gene fusions from RNA sequencing data","year":2021,"lang":"en","type":"article","venue":"Genome Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":524,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Heidelberger Zentrum für Personalisierte Onkologie Deutsches Krebsforschungszentrum In Der Helmholtz-Gemeinschaft; Nationales Centrum für Tumorerkrankungen Heidelberg; Ontario Institute for Cancer Research; Government of Ontario; Deutsches Krebsforschungszentrum","keywords":"KRAS; Biology; Fusion gene; ROS1; Computational biology; Druggability; Gene; Cancer; Identification (biology); Cancer research; Bioinformatics; Mutation; Genetics; Adenocarcinoma","authors":[{"name":"Sebastian Uhrig","is_ca":false},{"name":"Julia Ellermann","is_ca":false},{"name":"Tatjana Walther","is_ca":false},{"name":"Pauline Burkhardt","is_ca":false},{"name":"Martina Fröhlich","is_ca":false},{"name":"Barbara Hutter","is_ca":false},{"name":"Umut H. Toprak","is_ca":false},{"name":"Olaf Neumann","is_ca":false},{"name":"Albrecht Stenzinger","is_ca":false},{"name":"Claudia Scholl","is_ca":false},{"name":"Stefan Fröhling","is_ca":false},{"name":"Benedikt Brors","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.266035831030826,"gpt":0.449513237461834,"spread":0.183477406431008,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001752516,0.00007428259,0.000313019,0.0001907838,0.0002032671,0.00002071818,0.0001919701,0.0001010535,0.0004266343],"category_scores_gemma":[0.001230756,0.00006362855,0.00002538096,0.0005305201,0.0002557933,0.00003769989,0.0006275384,0.0004502509,0.00005658234],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001684912,"about_ca_system_score_gemma":0.00109055,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000753316,"about_ca_topic_score_gemma":0.0001030661,"domain_scores_codex":[0.9979777,0.0003223023,0.0002425693,0.0004143974,0.0006510121,0.0003919806],"domain_scores_gemma":[0.9977233,0.0006103691,0.00003480844,0.0008904839,0.000517392,0.0002236767],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001137966,0.00008188641,0.003227437,0.00007517289,0.00009600388,0.0002159215,0.0004595928,0.0000107815,0.9905297,0.00001987564,0.0000391809,0.005130648],"study_design_scores_gemma":[0.004651643,0.001055557,0.4873775,0.0003313835,0.0003280712,0.000428737,0.007405338,0.0826513,0.4091918,0.000637311,0.005607721,0.0003337216],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9898489,0.004020305,0.002109387,0.0005884695,0.00003756947,0.0003005071,0.0001181307,0.00001255629,0.00296414],"genre_scores_gemma":[0.9944094,0.001445566,0.002964391,0.00002346199,0.0001528452,0.00001449199,0.0001701903,0.00001284995,0.0008068324],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5813379,"threshold_uncertainty_score":0.4671346,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2031505107","doi":"10.1038/bjc.2014.215","title":"Oncogenic KRAS signalling in pancreatic cancer","year":2014,"lang":"en","type":"review","venue":"British Journal of Cancer","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":501,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Deutschen Konsortium für Translationale Krebsforschung; Partenariat Canadien Contre Le Cancer; Deutsche Krebshilfe; Deutsche Forschungsgemeinschaft","keywords":"KRAS; Pancreatic cancer; Context (archaeology); Druggability; Cancer research; Cancer; Biology; Pancreatic Intraepithelial Neoplasia; Effector; Medicine; Bioinformatics; Oncology; Internal medicine; Colorectal cancer; Immunology; Gene; Genetics","authors":[{"name":"Serap EŞER","is_ca":false},{"name":"Angelika Schnieke","is_ca":false},{"name":"Günter Schneider","is_ca":false},{"name":"Dieter Saur","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06952848065448751,"gpt":0.4345967426747374,"spread":0.3650682620202499,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001343156,0.0003157234,0.004673915,0.0004115405,0.0000600811,0.00004805277,0.0003192866,0.0004466503,0.002159866],"category_scores_gemma":[0.0004010425,0.0002818411,0.0007837641,0.0004336573,0.000139347,0.00008023075,0.00004823111,0.001734753,0.00004100888],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001111998,"about_ca_system_score_gemma":0.005030204,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001845837,"about_ca_topic_score_gemma":0.001107979,"domain_scores_codex":[0.9964322,0.0003872394,0.001671059,0.0002857296,0.0006947883,0.0005289997],"domain_scores_gemma":[0.9975321,0.0004914556,0.001062118,0.0001766739,0.000393387,0.0003442834],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006876639,0.0001030795,0.003842003,0.0124881,0.0009866642,0.002278627,0.00002608952,0.000004222886,0.000002653978,0.000004047092,0.002744582,0.9774511],"study_design_scores_gemma":[0.001507357,0.0002269197,0.00109366,0.1506937,0.004284637,0.005032537,0.0000121145,0.00001973964,0.000001127359,0.0000326099,0.8368705,0.0002251301],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002530191,0.9950119,0.00004695035,0.000104613,0.0004003628,0.000611037,0.00003177661,0.000008234165,0.001254892],"genre_scores_gemma":[0.0002616008,0.9944078,0.0003088347,0.0001778649,0.001888124,0.0001603479,0.000008688512,0.00007658642,0.002710172],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.977226,"threshold_uncertainty_score":0.9999634,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2146542392","doi":"10.1158/2159-8290.cd-11-0194","title":"<i>ATM</i> Mutations in Patients with Hereditary Pancreatic Cancer","year":2011,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":489,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network","funders":"National Cancer Institute","keywords":"Pancreatic cancer; Cancer; Genetics; Biology; Adenocarcinoma; Exome sequencing; Exome; Mutation; Cancer research; Gene; Medicine","authors":[{"name":"Nicholas J. Roberts","is_ca":true},{"name":"Yuchen Jiao","is_ca":true},{"name":"Jun Yu","is_ca":true},{"name":"Levy Kopelovich","is_ca":true},{"name":"Gloria M. Petersen","is_ca":true},{"name":"Melissa L. Bondy","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Ann G. Schwartz","is_ca":true},{"name":"Sapna Syngal","is_ca":true},{"name":"Michele L. Coté","is_ca":true},{"name":"Jennifer E. Axilbund","is_ca":true},{"name":"Richard D. Schulick","is_ca":true},{"name":"Syed Z. Ali","is_ca":true},{"name":"James R. Eshleman","is_ca":true},{"name":"Victor E. Velculescu","is_ca":true},{"name":"Michael Goggins","is_ca":true},{"name":"Bert Vogelstein","is_ca":true},{"name":"Nickolas Papadopoulos","is_ca":true},{"name":"Ralph H. Hruban","is_ca":true},{"name":"Kenneth W. Kinzler","is_ca":true},{"name":"Alison P. Klein","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03231327219858047,"gpt":0.310225705989058,"spread":0.2779124337904775,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008030249,0.000149605,0.0004009118,0.0001098446,0.00005291072,0.000009993738,0.00008706262,0.0000769097,0.0009548843],"category_scores_gemma":[0.0000288815,0.00010757,0.00004411472,0.0002845101,0.000190687,0.0002800382,0.00002973143,0.000212377,0.00002582445],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000299469,"about_ca_system_score_gemma":0.0007233073,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003233486,"about_ca_topic_score_gemma":0.00126498,"domain_scores_codex":[0.9988386,0.0000403736,0.0002238245,0.0002706314,0.0002757403,0.0003508215],"domain_scores_gemma":[0.999393,0.00005661551,0.00006247266,0.0002537164,0.0001019505,0.0001322764],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008055684,0.0003777575,0.9954458,0.00008953409,0.0001577994,0.00006593489,0.0007154027,0.000005731173,0.0000177335,0.00007627315,0.001145108,0.001097367],"study_design_scores_gemma":[0.003551497,0.0004101862,0.9945655,0.0003504101,0.0002587592,0.000002614399,0.0002050423,0.00003046413,0.0001211686,0.0001303894,0.0002396745,0.0001342204],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9866243,0.0009591662,0.0000647854,0.0001849923,0.0001504672,0.0006125935,0.00008713116,0.00002463122,0.01129194],"genre_scores_gemma":[0.9960419,0.0002363883,0.0002950054,0.0006170844,0.0001302998,0.0005283667,0.00004972046,0.00002753656,0.002073687],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009417621,"threshold_uncertainty_score":0.9999584,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1977483924","doi":"10.1007/s00268-012-1771-1","title":"Guidelines for Perioperative Care for Pancreaticoduodenectomy: Enhanced Recovery After Surgery (ERAS<sup>®</sup>) Society Recommendations","year":2012,"lang":"en","type":"article","venue":"World Journal of Surgery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":471,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Perioperative; Protocol (science); Pancreaticoduodenectomy; Vascular surgery; Evidence-based medicine; Randomized controlled trial; Abdominal surgery; MEDLINE; Evidence-based practice; Cardiothoracic surgery; Intensive care medicine; Surgery; General surgery; Cardiac surgery; Alternative medicine","authors":[{"name":"Kristoffer Lassen","is_ca":false},{"name":"Mariëlle M.E. Coolsen","is_ca":false},{"name":"K. Slim","is_ca":false},{"name":"Francesco Carli","is_ca":true},{"name":"José Eduardo de Aguilar‐Nascimento","is_ca":false},{"name":"Markus Schäfer","is_ca":false},{"name":"Rowan W. Parks","is_ca":false},{"name":"Kenneth C. H. Fearon","is_ca":false},{"name":"Dileep N. Lobo","is_ca":false},{"name":"Nicolas Demartines","is_ca":false},{"name":"Marco Braga","is_ca":false},{"name":"Olle Ljungqvist","is_ca":false},{"name":"Cornelis H.C. Dejong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1235019000746652,"gpt":0.400795106893434,"spread":0.2772932068187688,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003010628,0.0002796651,0.001676094,0.0004558416,0.0002805771,0.00004343449,0.0000941209,0.0001533103,0.0005889549],"category_scores_gemma":[0.003666761,0.0002174895,0.001359693,0.0003635795,0.0001192432,0.0004738816,0.00003388439,0.0003293224,0.00001112212],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004040809,"about_ca_system_score_gemma":0.001452645,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001307974,"about_ca_topic_score_gemma":0.00001484068,"domain_scores_codex":[0.9970771,0.000169011,0.001428115,0.0002270762,0.0003758462,0.0007228567],"domain_scores_gemma":[0.9890836,0.006844637,0.000507487,0.0002634768,0.002899875,0.0004009075],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00605579,0.0005759426,0.4469245,0.001023,0.001715198,0.00002057862,0.006069338,0.00004232473,0.001564137,0.0000529246,0.4791234,0.05683287],"study_design_scores_gemma":[0.007565839,0.001110727,0.08952664,0.005247611,0.003676496,0.0005591311,0.02276819,0.00145441,0.008963088,0.0003426452,0.8573986,0.001386569],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9394131,0.0175374,0.02100107,0.01803542,0.001494989,0.001458541,0.0002009292,0.00004135372,0.0008171449],"genre_scores_gemma":[0.9028609,0.006043969,0.07260706,0.003910846,0.00518488,0.0006681741,0.0002001949,0.0001030954,0.008420861],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3782753,"threshold_uncertainty_score":0.8868963,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4312094134","doi":"10.1056/nejmoa2208470","title":"Sotorasib in <i>KRAS</i> p.G12C–Mutated Advanced Pancreatic Cancer","year":2022,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":468,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Cancer Care Ontario","funders":"Sheikh Khalifa Bin Zayed Al Nahyan Institute for Personalized Cancer Therapy; National Center for Advancing Translational Sciences; National Cancer Institute; Memorial Sloan-Kettering Cancer Center; Cancer Prevention and Research Institute of Texas; Amgen","keywords":"KRAS; Pancreatic cancer; Medicine; Mutation; Pancreas; Cancer; Cancer research; Internal medicine; Biology; Genetics; Colorectal cancer; Gene","authors":[{"name":"John H. Strickler","is_ca":false},{"name":"Hironaga Satake","is_ca":false},{"name":"Thomas J. George","is_ca":false},{"name":"Rona Yaeger","is_ca":false},{"name":"Antoine Hollebecque","is_ca":false},{"name":"Ignacio Garrido‐Laguna","is_ca":false},{"name":"Martin Schüler","is_ca":false},{"name":"Timothy F. Burns","is_ca":false},{"name":"Andrew L. Coveler","is_ca":false},{"name":"Gerald S. Falchook","is_ca":false},{"name":"Mark Vincent","is_ca":true},{"name":"Yu Sunakawa","is_ca":false},{"name":"Laëtitia Dahan","is_ca":false},{"name":"David L. Bajor","is_ca":false},{"name":"Sun Young Rha","is_ca":false},{"name":"Charlotte Lemech","is_ca":false},{"name":"Dejan Juric","is_ca":false},{"name":"Marko Rehn","is_ca":false},{"name":"Gataree Ngarmchamnanrith","is_ca":false},{"name":"Pegah Jafarinasabian","is_ca":false},{"name":"Qui Tran","is_ca":false},{"name":"David S. Hong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02978042101672789,"gpt":0.3606203463971002,"spread":0.3308399253803723,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001766305,0.0001661332,0.00105345,0.0004311364,0.00009392908,0.000003839558,0.0001893731,0.00005256989,0.00354846],"category_scores_gemma":[0.0007026225,0.0001126107,0.00007726675,0.0005549025,0.0001335938,0.00007451105,0.00005367078,0.001014546,0.000004719288],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003875884,"about_ca_system_score_gemma":0.001135225,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006791796,"about_ca_topic_score_gemma":0.0001145793,"domain_scores_codex":[0.9975083,0.0003000918,0.0007666132,0.0001663652,0.0009010877,0.0003574731],"domain_scores_gemma":[0.9984098,0.0004828713,0.0003307172,0.0001849749,0.0001862363,0.0004053634],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.009170814,0.0004313715,0.8122846,0.0001383903,0.0003955301,0.004477667,0.0040114,0.0004262417,0.0160046,0.0001082079,0.03132162,0.1212295],"study_design_scores_gemma":[0.3374356,0.01747958,0.3608169,0.001869188,0.001494651,0.01080851,0.004473368,0.001172838,0.0006373627,0.002222051,0.261158,0.0004319403],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9685082,0.007305368,0.0001102707,0.01949596,0.000589388,0.000351937,0.000004614365,0.00001297837,0.003621226],"genre_scores_gemma":[0.9905013,0.002170722,0.0005615623,0.001669768,0.001660731,0.00002718152,0.00001013696,0.00002378056,0.003374825],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4514678,"threshold_uncertainty_score":0.9973624,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2015943054","doi":"10.1038/bjc.2014.418","title":"Overall survival and clinical characteristics of pancreatic cancer in BRCA mutation carriers","year":2014,"lang":"en","type":"article","venue":"British Journal of Cancer","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":438,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Medicine; Pancreatic cancer; Malignancy; BRCA mutation; Internal medicine; Oncology; Adenocarcinoma; Stage (stratigraphy); Cancer; Pancreatic ductal adenocarcinoma; Gastroenterology; Breast cancer; Biology","authors":[{"name":"Talia Golan","is_ca":false},{"name":"Zaheer Kanji","is_ca":true},{"name":"Ron Epelbaum","is_ca":false},{"name":"Nicholas Devaud","is_ca":true},{"name":"Efrat Dagan","is_ca":false},{"name":"Spring Holter","is_ca":true},{"name":"Dan Aderka","is_ca":false},{"name":"Shani Paluch–Shimon","is_ca":false},{"name":"Brett A. Kaufman","is_ca":false},{"name":"Ruth Gershoni‐Baruch","is_ca":false},{"name":"David W. Hedley","is_ca":true},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Eitan Friedman","is_ca":false},{"name":"Steven Gallinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0290428155288431,"gpt":0.3876839837172945,"spread":0.3586411681884514,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001121387,0.00007162266,0.0007558339,0.00008318948,0.00002461473,0.00001266059,0.00005929377,0.0001038507,0.0002440558],"category_scores_gemma":[0.0008125814,0.00007067333,0.00007926858,0.00008159333,0.0001880963,0.00007075046,0.00001657081,0.0003598266,5.305282e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001062551,"about_ca_system_score_gemma":0.0005324259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002298926,"about_ca_topic_score_gemma":0.001669192,"domain_scores_codex":[0.9984833,0.0001933856,0.0007348832,0.0001066431,0.0003096822,0.0001720898],"domain_scores_gemma":[0.9987516,0.0003138386,0.0003639568,0.00006781009,0.0003311532,0.0001716702],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003984498,0.00007007181,0.8386984,0.0001115293,0.0001560799,0.0001822144,0.00008778176,0.000002731258,0.0001406397,0.00002637764,0.0001614826,0.1599643],"study_design_scores_gemma":[0.003790231,0.0004447687,0.9921237,0.001116312,0.0002904332,0.0003587357,0.00007241303,0.0006092584,0.00002767339,0.0001142331,0.0009908916,0.00006135678],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946891,0.003694156,0.0001123567,0.000431429,0.0002985384,0.0001245968,0.00002530154,0.000002333098,0.0006221654],"genre_scores_gemma":[0.9792157,0.01967711,0.0002817793,0.0001367237,0.000437235,0.000005863642,0.000002165839,0.00001135805,0.0002320384],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1599029,"threshold_uncertainty_score":0.3475304,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2926499479","doi":"10.1097/sla.0000000000003284","title":"Factors Predicting Response, Perioperative Outcomes, and Survival Following Total Neoadjuvant Therapy for Borderline/Locally Advanced Pancreatic Cancer","year":2019,"lang":"en","type":"article","venue":"Annals of Surgery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":437,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Pancreas Centre (Canada)","funders":"","keywords":"Medicine; Neoadjuvant therapy; Perioperative; Gemcitabine; Surgery; Chemotherapy; FOLFIRINOX; Regimen; Pancreatic cancer; Oncology; Internal medicine; Cancer; Irinotecan; Breast cancer; Colorectal cancer","authors":[{"name":"Mark J. Truty","is_ca":true},{"name":"Michael L. Kendrick","is_ca":true},{"name":"David M. Nagorney","is_ca":true},{"name":"Rory L. Smoot","is_ca":true},{"name":"Sean P. Cleary","is_ca":true},{"name":"Rondell P. Graham","is_ca":false},{"name":"Ajit H. Goenka","is_ca":false},{"name":"Christopher L. Hallemeier","is_ca":false},{"name":"Michel G. Haddock","is_ca":false},{"name":"William S. Harmsen","is_ca":false},{"name":"Amit Mahipal","is_ca":false},{"name":"Robert R. McWilliams","is_ca":false},{"name":"Þorvarður R. Hálfdánarson","is_ca":false},{"name":"Axel Grothey","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1736490358301666,"gpt":0.42568216562589,"spread":0.2520331297957234,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001502678,0.0002301323,0.001327864,0.0001648655,0.0001040441,0.00001511201,0.00005896972,0.0001288377,0.0001078451],"category_scores_gemma":[0.00149329,0.0001616091,0.0003194803,0.0001589419,0.00009991301,0.0001502175,0.00003490981,0.0001676424,0.000002044174],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002964538,"about_ca_system_score_gemma":0.0007083043,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002050948,"about_ca_topic_score_gemma":0.00001209254,"domain_scores_codex":[0.9981582,0.0001823164,0.0005115988,0.0003305686,0.0003582056,0.0004591437],"domain_scores_gemma":[0.9944705,0.004649756,0.000158253,0.0002453684,0.0003037873,0.0001723183],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00438307,0.0001115281,0.9804817,0.000113156,0.000600089,0.00001114059,0.0006760408,0.000008788845,0.005773113,0.00001904951,0.0001332968,0.007689019],"study_design_scores_gemma":[0.002178687,0.0007509888,0.9920689,0.0003727332,0.00007067496,0.000002622148,0.00108837,0.0006099464,0.001881831,0.00001505123,0.0007933918,0.0001668389],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932772,0.002750069,0.00005821995,0.002106291,0.0003777597,0.001039879,0.0000626018,0.00003329635,0.000294715],"genre_scores_gemma":[0.9957137,0.001284121,0.0002440739,0.0003577048,0.00005802933,0.0001227139,0.00002973194,0.00003538153,0.002154617],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01158716,"threshold_uncertainty_score":0.6590227,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2090755771","doi":"10.1053/j.gastro.2015.01.014","title":"American Gastroenterological Association Technical Review on the Diagnosis and Management of Asymptomatic Neoplastic Pancreatic Cysts","year":2015,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":430,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Hamilton Health Sciences","funders":"","keywords":"Asymptomatic; Medicine; Guideline; Internal medicine; Annals; Pancreatic cyst; Gastroenterology; Population; Pancreas; Pancreatic tumor; Scopus; Pancreatic cancer; MEDLINE; Pathology; Cancer","authors":[{"name":"James M. Scheiman","is_ca":false},{"name":"Joo Ha Hwang","is_ca":false},{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06536898869391007,"gpt":0.3822888818491789,"spread":0.3169198931552689,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001758598,0.0004859312,0.004545243,0.0001986145,0.00005893644,0.00001007154,0.0003394691,0.0002426125,0.0001032616],"category_scores_gemma":[0.0007136708,0.0002760824,0.0004180412,0.0002811975,0.0005252096,0.00001942122,0.0002981328,0.000779674,0.00008501228],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005135931,"about_ca_system_score_gemma":0.0001069293,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007798177,"about_ca_topic_score_gemma":0.00000923337,"domain_scores_codex":[0.9955366,0.001409338,0.001146821,0.0005510111,0.0006437535,0.0007124293],"domain_scores_gemma":[0.9965572,0.001319523,0.00104903,0.0006682688,0.0001394041,0.000266512],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001088573,0.001938437,0.4230892,0.1819776,0.007689084,0.000613157,0.00004268598,2.916802e-7,4.628822e-7,0.0003705196,0.04843015,0.3347599],"study_design_scores_gemma":[0.005011464,0.0386309,0.1234939,0.2936898,0.05907359,0.003994329,0.0001067347,0.00004871869,1.813374e-7,0.0001398693,0.4752026,0.0006079988],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.009400804,0.9831032,0.00005276329,0.002812811,0.00008960058,0.003815849,0.00006044095,0.00005336059,0.0006112399],"genre_scores_gemma":[0.001034109,0.9946715,0.0005846743,0.001386643,0.00006903322,0.001964815,0.00007376361,0.00003939994,0.0001760216],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.4267724,"threshold_uncertainty_score":0.9999691,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3206996158","doi":"10.1016/j.cell.2021.09.022","title":"Spatially confined sub-tumor microenvironments in pancreatic cancer","year":2021,"lang":"en","type":"article","venue":"Cell","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":423,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ontario Institute for Cancer Research; University Health Network; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Occupational Cancer Research Centre; Princess Margaret Cancer Centre","funders":"","keywords":"Biology; Tumor microenvironment; Pancreatic cancer; Phenotype; Fibroblast; Cancer research; Tumor progression; Genetic heterogeneity; Immune system; Cancer-Associated Fibroblasts; Pancreatic tumor; Cancer; Immunology; Genetics; Cell culture; Gene","authors":[{"name":"Barbara T. Grünwald","is_ca":true},{"name":"Antoine Devisme","is_ca":false},{"name":"Geoffroy Andrieux","is_ca":false},{"name":"Foram Vyas","is_ca":true},{"name":"Kazeera Aliar","is_ca":true},{"name":"Curtis W. McCloskey","is_ca":true},{"name":"Andrew Macklin","is_ca":true},{"name":"Gun Ho Jang","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Joan Miguel Romero","is_ca":true},{"name":"Prashant Bavi","is_ca":true},{"name":"Peter Bronsert","is_ca":false},{"name":"Faiyaz Notta","is_ca":true},{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Laura Tamblyn","is_ca":true},{"name":"Molly L. Udaskin","is_ca":true},{"name":"Nikolina Radulovich","is_ca":true},{"name":"Sandra E. Fischer","is_ca":true},{"name":"Melanie Boerries","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"Thomas Kislinger","is_ca":true},{"name":"Rama Khokha","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02185218738619339,"gpt":0.3013799435676659,"spread":0.2795277561814725,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001284582,0.0001036187,0.0003867434,0.00005511384,0.00003003745,0.000007262998,0.00005712449,0.00006422343,0.002905329],"category_scores_gemma":[0.00007237888,0.00009387364,0.00004632137,0.0001293266,0.00008263512,0.00001984846,0.00004634892,0.0001908022,0.0002844441],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001522669,"about_ca_system_score_gemma":0.0004873944,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002790417,"about_ca_topic_score_gemma":0.000202059,"domain_scores_codex":[0.9989843,0.00007368324,0.0002188074,0.000238061,0.0001814404,0.0003036781],"domain_scores_gemma":[0.9994553,0.00008972954,0.00004112509,0.0002421509,0.00003825346,0.0001334837],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001107578,0.0003089281,0.7189822,0.0001251771,0.00003355181,0.001114748,0.000164834,0.000002647793,0.2775366,0.000007550122,0.001158442,0.0004545862],"study_design_scores_gemma":[0.004208128,0.0001618405,0.8001639,0.0001490171,0.0001602518,0.000059027,0.0001451945,0.0004556322,0.186869,0.00005608457,0.007437098,0.0001348603],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9781282,0.001412156,0.00003845149,0.0008199853,0.00007398047,0.0002654331,0.000007807999,0.00001226084,0.01924172],"genre_scores_gemma":[0.9840307,0.0009206909,0.0006606478,0.0009612382,0.00007938471,0.00006568206,0.00003151131,0.0000172634,0.01323289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09066761,"threshold_uncertainty_score":0.9980062,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4288447807","doi":"10.1038/s41588-022-01134-8","title":"Single-nucleus and spatial transcriptome profiling of pancreatic cancer identifies multicellular dynamics associated with neoadjuvant treatment","year":2022,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":413,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Moonshot Research and Development Program; National Cancer Institute; Stand Up To Cancer; University of California, San Francisco; Klarman Cell Observatory, Broad Institute; National Science Foundation; Damon Runyon Cancer Research Foundation; Pancreatic Cancer Canada Foundation; Princess Margaret Cancer Foundation; Ludwig Institute for Cancer Research; Canadian Cancer Society Research Institute; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Institute of Diabetes and Digestive and Kidney Diseases; Lustgarten Foundation; Conquer Cancer Foundation; Government of Ontario; Howard Hughes Medical Institute","keywords":"Biology; Transcriptome; Pancreatic cancer; Multicellular organism; Cancer research; Progenitor cell; Gene expression profiling; Computational biology; Phenotype; Bioinformatics; Cell; Cancer; Stem cell; Genetics; Gene expression; Gene","authors":[{"name":"William L. Hwang","is_ca":false},{"name":"Karthik A. Jagadeesh","is_ca":false},{"name":"Jimmy A. Guo","is_ca":false},{"name":"Hannah I. Hoffman","is_ca":false},{"name":"Payman Yadollahpour","is_ca":false},{"name":"Jason Reeves","is_ca":false},{"name":"Rahul Mohan","is_ca":false},{"name":"Eugene Drokhlyansky","is_ca":false},{"name":"Nicholas Van Wittenberghe","is_ca":false},{"name":"Orr Ashenberg","is_ca":false},{"name":"Samouil L. Farhi","is_ca":false},{"name":"Denis Schapiro","is_ca":false},{"name":"Prajan Divakar","is_ca":false},{"name":"Eric Miller","is_ca":false},{"name":"Daniel R. Zollinger","is_ca":false},{"name":"George Eng","is_ca":false},{"name":"Jason M. Schenkel","is_ca":false},{"name":"Jennifer Su","is_ca":false},{"name":"Carina Shiau","is_ca":false},{"name":"Patrick Yu","is_ca":false},{"name":"William A. Freed-Pastor","is_ca":false},{"name":"Domenic Abbondanza","is_ca":false},{"name":"Arnav Mehta","is_ca":false},{"name":"Joshua Gould","is_ca":false},{"name":"Conner Lambden","is_ca":false},{"name":"Caroline Porter","is_ca":false},{"name":"Alexander M. Tsankov","is_ca":false},{"name":"Danielle Dionne","is_ca":false},{"name":"Julia Waldman","is_ca":false},{"name":"Michael S. Cuoco","is_ca":false},{"name":"Lan Nguyễn","is_ca":false},{"name":"Toni Delorey","is_ca":false},{"name":"Devan Phillips","is_ca":false},{"name":"Jaimie L. Barth","is_ca":false},{"name":"Marina Kem","is_ca":false},{"name":"Debora Ciprani","is_ca":false},{"name":"Jorge Roldán","is_ca":false},{"name":"Piotr Zelga","is_ca":false},{"name":"Vjola Jorgji","is_ca":false},{"name":"Jonathan Chen","is_ca":false},{"name":"Zackery A. Ely","is_ca":false},{"name":"Daniel Zhao","is_ca":false},{"name":"Kit Fuhrman","is_ca":false},{"name":"Robin Fropf","is_ca":false},{"name":"Joseph Beechem","is_ca":false},{"name":"Jay S. Loeffler","is_ca":false},{"name":"David P. Ryan","is_ca":false},{"name":"Colin D. Weekes","is_ca":false},{"name":"Cristina R. Ferrone","is_ca":false},{"name":"Motaz Qadan","is_ca":false},{"name":"Martin J. Aryee","is_ca":false},{"name":"Rakesh K. Jain","is_ca":false},{"name":"Donna Neuberg","is_ca":false},{"name":"Jennifer Y. Wo","is_ca":false},{"name":"Theodore S. Hong","is_ca":false},{"name":"Ramnik J. Xavier","is_ca":false},{"name":"Andrew J. Aguirre","is_ca":false},{"name":"Orit Rozenblatt–Rosen","is_ca":false},{"name":"Mari Mino–Kenudson","is_ca":false},{"name":"Carlos Fernández‐del Castillo","is_ca":false},{"name":"Andrew S. Liss","is_ca":false},{"name":"David T. Ting","is_ca":false},{"name":"Tyler Jacks","is_ca":false},{"name":"Aviv Regev","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02093330345950601,"gpt":0.3036530425954979,"spread":0.2827197391359919,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002045674,0.0001846333,0.0005712864,0.0001227535,0.0001649395,0.00001203986,0.00008783678,0.0001838188,0.0000978388],"category_scores_gemma":[0.00008174598,0.0001437512,0.00006315589,0.0002242928,0.000177941,0.00001730948,0.00004878599,0.0004693808,4.695859e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005252256,"about_ca_system_score_gemma":0.0003093033,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000381218,"about_ca_topic_score_gemma":0.0007546523,"domain_scores_codex":[0.9984874,0.000117759,0.0002811608,0.0003000231,0.0005118531,0.0003018372],"domain_scores_gemma":[0.9991983,0.0001390145,0.0001365983,0.0002382438,0.0001717706,0.0001160786],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001132428,0.001144922,0.9043401,0.0002152666,0.00124174,0.0002449928,0.001986303,0.0002089113,0.07461877,0.00003335005,0.00003224093,0.01480091],"study_design_scores_gemma":[0.02073803,0.01606338,0.6646527,0.0005510008,0.00729165,0.0002647463,0.004908486,0.2095209,0.07372525,0.0002019773,0.001261045,0.0008208327],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990198,0.007788894,0.0002340572,0.0002998726,0.000143828,0.0008056401,0.0002160052,0.00002880169,0.0002848833],"genre_scores_gemma":[0.9962229,0.0006193601,0.001808185,0.00007795981,0.00005727078,0.0001083032,0.0001624935,0.00003465514,0.0009088609],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2396875,"threshold_uncertainty_score":0.5862003,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2135802413","doi":"10.1093/annonc/mdr541","title":"Cigarette smoking and pancreatic cancer: an analysis from the International Pancreatic Cancer Case-Control Consortium (Panc4)","year":2011,"lang":"en","type":"article","venue":"Annals of Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":411,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Cancer Care Ontario; University of Toronto; Public Health Ontario; Toronto General Hospital","funders":"National Cancer Institute; National Institutes of Health; Associazione Italiana per la Ricerca sul Cancro; Canadian Institutes of Health Research; Cancer Research Society; Lustgarten Foundation","keywords":"Medicine; Pancreatic cancer; Odds ratio; Confidence interval; Internal medicine; Cigarette smoking; Case-control study; Cancer; Demography","authors":[{"name":"Cristina Bosetti","is_ca":false},{"name":"Ersilia Lucenteforte","is_ca":false},{"name":"Debra T. Silverman","is_ca":false},{"name":"Gloria M. Petersen","is_ca":false},{"name":"Paige M. Bracci","is_ca":false},{"name":"B.-T. Ji","is_ca":false},{"name":"Eva Negri","is_ca":false},{"name":"D. Li","is_ca":false},{"name":"Harvey A. Risch","is_ca":false},{"name":"Sara H. Olson","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"Anthony B. Miller","is_ca":true},{"name":"H. Bas Bueno‐de‐Mesquita","is_ca":false},{"name":"Renato Talamini","is_ca":false},{"name":"Jerry Polesel","is_ca":false},{"name":"P Ghadirian","is_ca":false},{"name":"Peter Baghurst","is_ca":false},{"name":"Witold Zatoński","is_ca":false},{"name":"Elizabeth T. H. Fontham","is_ca":false},{"name":"William R. Bamlet","is_ca":false},{"name":"Elizabeth A. Holly","is_ca":false},{"name":"Paola Bertuccio","is_ca":false},{"name":"Yu‐Tang Gao","is_ca":false},{"name":"Moustapha Hassan","is_ca":false},{"name":"Herbert Yu","is_ca":false},{"name":"Robert C. Kurtz","is_ca":false},{"name":"Michelle Cotterchio","is_ca":true},{"name":"Junwu Su","is_ca":false},{"name":"Patrick Maisonneuve","is_ca":false},{"name":"Eric J. Duell","is_ca":false},{"name":"Paolo Boffetta","is_ca":false},{"name":"Carlo La Vecchia","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1225224421857385,"gpt":0.4098809188053986,"spread":0.2873584766196601,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001002193,0.0002229689,0.001275057,0.000226996,0.0001508945,0.00001560661,0.0002781064,0.0002601855,0.002805499],"category_scores_gemma":[0.0003881164,0.000155494,0.0001862437,0.0003302836,0.0006044409,0.0001200578,0.00008552539,0.0003787098,0.000004013573],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000116434,"about_ca_system_score_gemma":0.0006054256,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03658863,"about_ca_topic_score_gemma":0.009098692,"domain_scores_codex":[0.9977336,0.0003935811,0.0006223883,0.0004461913,0.000355089,0.0004491555],"domain_scores_gemma":[0.9971452,0.001264626,0.0003719963,0.0004885168,0.0004677888,0.0002618453],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001028395,0.0002680563,0.9611166,0.00002403037,0.01036351,0.0007913579,0.002335381,0.000007641982,0.0003080901,0.0002535104,0.001069677,0.02243379],"study_design_scores_gemma":[0.002738685,0.00120321,0.9765733,0.00009106877,0.01123867,0.0002736342,0.001316559,0.003820796,0.0004033806,0.0005498438,0.001619298,0.0001714881],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9817289,0.004469375,0.0001438503,0.007123956,0.0001987771,0.0004751492,0.0003136842,0.00002936862,0.005516933],"genre_scores_gemma":[0.9897112,0.004097941,0.000369288,0.004916641,0.0003304247,0.0002363129,0.0000369047,0.00002142679,0.0002799038],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02748994,"threshold_uncertainty_score":0.9981061,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3001713806","doi":"10.1200/jco.19.02931","title":"Randomized, Multicenter, Phase II Trial of Gemcitabine and Cisplatin With or Without Veliparib in Patients With Pancreas Adenocarcinoma and a Germline <i>BRCA/PALB2</i> Mutation","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":398,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Cancer Institute","keywords":"Medicine; Gemcitabine; Veliparib; Internal medicine; PARP inhibitor; Pancreatic cancer; Clinical endpoint; Population; Oncology; PALB2; Surgery; Randomized controlled trial; Gastroenterology; Cancer; Germline mutation; Mutation","authors":[{"name":"Eileen M. O’Reilly","is_ca":false},{"name":"Jonathan W. Lee","is_ca":false},{"name":"Mark M. Zalupski","is_ca":false},{"name":"Marinela Capanu","is_ca":false},{"name":"Jennifer Park","is_ca":false},{"name":"Talia Golan","is_ca":false},{"name":"Esther Tahover","is_ca":false},{"name":"Maeve A. Lowery","is_ca":false},{"name":"Joanne F. Chou","is_ca":false},{"name":"Vaibhav Sahai","is_ca":false},{"name":"Robin Brenner","is_ca":false},{"name":"Hedy L. Kindler","is_ca":false},{"name":"Kenneth H. Yu","is_ca":false},{"name":"Alice Zervoudakis","is_ca":false},{"name":"Shreya Vemuri","is_ca":false},{"name":"Zsofia K. Stadler","is_ca":false},{"name":"Richard Kinh Gian","is_ca":false},{"name":"Neesha C. Dhani","is_ca":true},{"name":"Alice P. Chen","is_ca":false},{"name":"David P. Kelsen","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.106064802960647,"gpt":0.4575294089187974,"spread":0.3514646059581503,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003228339,0.0001877956,0.0036152,0.0001487758,0.00004117404,0.000006707439,0.00008822211,0.0002736123,0.00006368016],"category_scores_gemma":[0.007244245,0.00009951303,0.0001266011,0.0001947255,0.0007655461,0.0001283325,0.00006563514,0.0008129468,8.524709e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004471001,"about_ca_system_score_gemma":0.001187667,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004873756,"about_ca_topic_score_gemma":0.0000638831,"domain_scores_codex":[0.9956747,0.0008851802,0.002443141,0.0002634595,0.0004926454,0.000240876],"domain_scores_gemma":[0.9931508,0.003880562,0.001760876,0.0001257044,0.0005554584,0.0005265888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.6174369,0.003105147,0.367241,0.00007310721,0.0003991972,0.0002759562,0.0003923167,0.000001149115,0.000009679005,0.000007455561,0.00005027954,0.01100775],"study_design_scores_gemma":[0.6992275,0.1418532,0.1550363,0.0001892266,0.001166328,0.0001098327,0.00013107,0.002028009,0.000007064205,0.00001401798,0.0001608211,0.00007651788],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938505,0.0003081806,0.0003507391,0.003665299,0.00008763449,0.001553416,0.000007151137,0.000004867225,0.0001721872],"genre_scores_gemma":[0.9890561,0.000403435,0.009238716,0.000861527,0.0003393499,0.00002000603,0.000008643446,0.0000185177,0.0000537283],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2122047,"threshold_uncertainty_score":0.867256,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2121120744","doi":"10.1200/jco.2003.02.098","title":"Comparison of Gemcitabine Versus the Matrix Metalloproteinase Inhibitor BAY 12-9566 in Patients With Advanced or Metastatic Adenocarcinoma of the Pancreas: A Phase III Trial of the National Cancer Institute of Canada Clinical Trials Group","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":397,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Gemcitabine; Medicine; Interim analysis; Pancreatic cancer; Clinical endpoint; Internal medicine; Oncology; Clinical trial; Cancer; Bay; Adenocarcinoma","authors":[{"name":"Michael J. Moore","is_ca":true},{"name":"John Hamm","is_ca":true},{"name":"Janet Dancey","is_ca":true},{"name":"Peter D. Eisenberg","is_ca":true},{"name":"M. Dagenais","is_ca":true},{"name":"Anthony Fields","is_ca":true},{"name":"Kennecke Hagan","is_ca":true},{"name":"Bernard R. Greenberg","is_ca":true},{"name":"Brian Colwell","is_ca":true},{"name":"Benny Zee","is_ca":true},{"name":"Dongsheng Tu","is_ca":true},{"name":"J. Ottaway","is_ca":true},{"name":"Rachel Humphrey","is_ca":true},{"name":"Lesley Seymour","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2971718577144146,"gpt":0.5606920091573374,"spread":0.2635201514429228,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.01913484,0.0001965755,0.004494951,0.0001186335,0.00005996395,0.00000234852,0.0004770548,0.0002546337,0.0001830115],"category_scores_gemma":[0.06446907,0.00007933471,0.0006949276,0.0004888657,0.001312251,0.00009395834,0.00009167496,0.001192006,1.780865e-7],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003092858,"about_ca_system_score_gemma":0.01868524,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003788475,"about_ca_topic_score_gemma":0.04646735,"domain_scores_codex":[0.9849805,0.005515111,0.007358334,0.0002185511,0.00164249,0.0002849949],"domain_scores_gemma":[0.9735609,0.01603292,0.008332438,0.0003833429,0.001466359,0.0002240846],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.5170864,0.009158072,0.4651384,0.0001291528,0.002242294,0.00002290228,0.0001400276,0.0001018753,0.0001241276,0.0003469427,0.0008791887,0.004630671],"study_design_scores_gemma":[0.4808246,0.04533951,0.4648081,0.0004880663,0.003165839,0.00001585219,0.0004570943,0.0001769061,0.0004539748,0.0001174162,0.004040466,0.0001121458],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933055,0.0004652983,0.00003327942,0.001689167,0.002011044,0.002139508,0.00006302587,0.000001087749,0.0002920738],"genre_scores_gemma":[0.997533,0.0001522342,0.001676455,0.0001731716,0.000293126,0.00004200592,0.000002670986,0.00001299255,0.000114297],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04533422,"threshold_uncertainty_score":0.9868779,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2137508065","doi":"10.1016/s1470-2045(11)70004-3","title":"Axitinib plus gemcitabine versus placebo plus gemcitabine in patients with advanced pancreatic adenocarcinoma: a double-blind randomised phase 3 study","year":2011,"lang":"en","type":"article","venue":"The Lancet Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":396,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Gemcitabine; Medicine; Placebo; Axitinib; Internal medicine; Oncology; Double blind; Ursodeoxycholic acid; Pancreatic cancer; Chemotherapy; Cancer","authors":[{"name":"Hedy L. Kindler","is_ca":false},{"name":"Tatsuya Ioka","is_ca":false},{"name":"D. J. Richel","is_ca":false},{"name":"Jaafar Bennouna","is_ca":false},{"name":"Richard Létourneau","is_ca":true},{"name":"Takuji Okusaka","is_ca":false},{"name":"Akihiro Funakoshi","is_ca":false},{"name":"Junji Furuse","is_ca":false},{"name":"Young Suk Park","is_ca":false},{"name":"Shinichi Ohkawa","is_ca":false},{"name":"Gregory M. Springett","is_ca":false},{"name":"Harpreet Wasan","is_ca":false},{"name":"Peter C. Trask","is_ca":false},{"name":"Paul Bycott","is_ca":false},{"name":"Alejandro D. Ricart","is_ca":false},{"name":"Sinil Kim","is_ca":false},{"name":"Eric Van Cutsem","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1317467363897036,"gpt":0.3910343132591694,"spread":0.2592875768694659,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001972642,0.000470197,0.002512693,0.0003113354,0.0001995438,0.00001643547,0.0005544704,0.0002676168,0.0007956073],"category_scores_gemma":[0.0004441609,0.000291766,0.0001137181,0.0006322092,0.0005621618,0.0001379231,0.000202739,0.0009909722,0.0001392113],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009490015,"about_ca_system_score_gemma":0.001386596,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005551724,"about_ca_topic_score_gemma":0.000565922,"domain_scores_codex":[0.9958401,0.0008232718,0.0008476966,0.0006979217,0.0006190484,0.001171957],"domain_scores_gemma":[0.9966582,0.00127909,0.000348785,0.001089586,0.000303115,0.0003212159],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.7660201,0.003060631,0.2216766,0.0000811381,0.0006768656,0.0004730356,0.006088216,0.00001399443,0.00002033033,0.0001575051,0.0002533843,0.001478209],"study_design_scores_gemma":[0.7161739,0.02170548,0.2577128,0.00007319672,0.0009805918,0.00003411126,0.002214515,0.0003710988,0.00001917506,0.00003737222,0.000418693,0.0002591053],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9620219,0.0003411151,0.00006274196,0.0009204235,0.0002966157,0.009184003,0.00001873043,0.0001053748,0.02704906],"genre_scores_gemma":[0.9951906,0.00008442862,0.001225999,0.0002920281,0.0004424806,0.001899829,0.00009320551,0.00006605269,0.0007053437],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04984627,"threshold_uncertainty_score":0.9999534,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2161479848","doi":"10.1200/jco.2014.59.7401","title":"Germline <i>BRCA</i> Mutations in a Large Clinic-Based Cohort of Patients With Pancreatic Adenocarcinoma","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":396,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute","funders":"Canadian Cancer Society Research Institute","keywords":"Medicine; Oncology; Family history; Pancreatic cancer; Genetic testing; Internal medicine; BRCA mutation; Cancer; Cohort; Sanger sequencing; Germline mutation; Breast cancer; Genetic counseling; Ovarian cancer; Adenocarcinoma; Mutation; Genetics; Gene","authors":[{"name":"Spring Holter","is_ca":true},{"name":"Ayelet Borgida","is_ca":true},{"name":"Anna Dodd","is_ca":true},{"name":"Robert C. Grant","is_ca":true},{"name":"Kara Semotiuk","is_ca":true},{"name":"David W. Hedley","is_ca":true},{"name":"Neesha C. Dhani","is_ca":true},{"name":"Steven A. Narod","is_ca":true},{"name":"Mohammad R. Akbari","is_ca":true},{"name":"Malcolm J. Moore","is_ca":true},{"name":"Steven Gallinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1176631675558528,"gpt":0.46802045403138,"spread":0.3503572864755273,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007595022,0.0001555344,0.002667688,0.0003090617,0.00002418927,0.000003625561,0.000196559,0.0004310573,0.0002521885],"category_scores_gemma":[0.01041061,0.0001018065,0.0002943478,0.0003684499,0.0004572326,0.00009424122,0.00004301259,0.001139099,0.00003114932],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000232472,"about_ca_system_score_gemma":0.007218307,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003915743,"about_ca_topic_score_gemma":0.000104732,"domain_scores_codex":[0.9944255,0.0009017653,0.003327137,0.0002147503,0.0007743183,0.0003564961],"domain_scores_gemma":[0.991081,0.004338861,0.001931724,0.0002914923,0.001699182,0.0006577558],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01125257,0.006384043,0.9784598,0.00004969295,0.0003922411,0.0004912091,0.0001137419,0.00001271718,0.000002189716,0.0000276666,0.001488028,0.00132611],"study_design_scores_gemma":[0.03724043,0.02632443,0.9321085,0.0001707674,0.0009533303,0.00004735788,0.000177049,0.0004796315,0.000005524014,0.0001647821,0.002243458,0.00008477768],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924164,0.0003062694,0.0004776518,0.002015765,0.0002586946,0.000563501,0.00001585901,0.000006375245,0.003939435],"genre_scores_gemma":[0.9886266,0.00007737951,0.009482024,0.001211346,0.0002688066,0.00001420596,0.0000257604,0.00001989081,0.0002740086],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04635134,"threshold_uncertainty_score":0.9984099,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3212093805","doi":"10.1038/s41568-021-00418-1","title":"Pancreatic cancer evolution and heterogeneity: integrating omics and clinical data","year":2021,"lang":"en","type":"review","venue":"Nature reviews. Cancer","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":382,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network","funders":"","keywords":"Pancreatic cancer; Translational research; Cancer; Carcinogenesis; Genomics; Synthetic lethality; Bioinformatics; Medicine; Clinical trial; Genetic heterogeneity; Biology; Cancer research; Computational biology; Oncology; Internal medicine; Genome; Pathology; Phenotype; DNA repair; Gene; Genetics","authors":[{"name":"Ashton A. Connor","is_ca":false},{"name":"Steven Gallinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2273221533062809,"gpt":0.5547397160139439,"spread":0.327417562707663,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.002367347,0.0005861606,0.006368337,0.000142234,0.0001342258,0.00005525906,0.0003484671,0.001616943,0.0001608107],"category_scores_gemma":[0.002901118,0.0003804244,0.0004064734,0.0004638284,0.0003141884,0.000110673,0.0006180506,0.003333797,0.00001225593],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005360573,"about_ca_system_score_gemma":0.002607823,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002670867,"about_ca_topic_score_gemma":0.0006791877,"domain_scores_codex":[0.995434,0.001007969,0.001466525,0.001266766,0.0003632251,0.000461534],"domain_scores_gemma":[0.9964792,0.000930365,0.0006727305,0.001322877,0.0002160533,0.0003787983],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000013467,0.00004735846,0.01392724,0.03350034,0.0009054826,0.00003773132,0.00001118669,3.629851e-9,2.717596e-7,0.00007418433,0.006026503,0.9454562],"study_design_scores_gemma":[0.0004593632,0.0000802435,0.0006311582,0.07840066,0.01139815,0.0002670196,0.00001211965,0.00009792987,7.928151e-8,0.000007918925,0.9083541,0.0002912479],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001519075,0.9959594,0.0000545716,0.000301064,0.0005261824,0.002361127,0.0003824284,0.00002665539,0.0002366444],"genre_scores_gemma":[0.000008284582,0.9940984,0.002139563,0.0005347735,0.001466629,0.0004720442,0.0006799451,0.00007089038,0.0005294279],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.945165,"threshold_uncertainty_score":0.9998648,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2005021386","doi":"10.1158/1078-0432.ccr-09-0227","title":"<i>SMAD4</i> Gene Mutations Are Associated with Poor Prognosis in Pancreatic Cancer","year":2009,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":371,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute; National Institutes of Health; Rolfe Pancreatic Cancer Foundation; Lustgarten Foundation","keywords":"CDKN2A; Pancreatic cancer; Pancreas; Adenocarcinoma; Hazard ratio; Germline mutation; Gene; Internal medicine; Lymph node; Oncology; Biology; Cancer; Medicine; Cancer research; Mutation; Gastroenterology; Confidence interval; Genetics","authors":[{"name":"Amanda L. Blackford","is_ca":false},{"name":"Oscar K. Serrano","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Giovanni Parmigiani","is_ca":false},{"name":"Siân Jones","is_ca":false},{"name":"D. Williams Parsons","is_ca":false},{"name":"Jimmy Lin","is_ca":false},{"name":"Rebecca Leary","is_ca":false},{"name":"James R. Eshleman","is_ca":false},{"name":"Michael Goggins","is_ca":true},{"name":"Elizabeth M. Jaffee","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Anirban Maitra","is_ca":false},{"name":"John L. Cameron","is_ca":false},{"name":"Kelly Olino","is_ca":false},{"name":"Richard Schulick","is_ca":false},{"name":"Jordan M. Winter","is_ca":false},{"name":"Joseph M. Herman","is_ca":false},{"name":"Daniel A. Laheru","is_ca":false},{"name":"Alison P. Klein","is_ca":false},{"name":"Bert Vogelstein","is_ca":false},{"name":"Kenneth W. Kinzler","is_ca":false},{"name":"Victor E. Velculescu","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2538550752722822,"gpt":0.5412453488539867,"spread":0.2873902735817045,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003610861,0.0001997535,0.001013189,0.0003361451,0.000213765,0.0000399665,0.000269786,0.0003360607,0.0007536209],"category_scores_gemma":[0.003518658,0.000147444,0.0001270826,0.001652168,0.0007637296,0.00009156908,0.00006524933,0.00174906,0.0000684647],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007295118,"about_ca_system_score_gemma":0.002461336,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001254304,"about_ca_topic_score_gemma":0.00302908,"domain_scores_codex":[0.9954091,0.0008726069,0.0007732142,0.0006615206,0.001237452,0.001046046],"domain_scores_gemma":[0.9957889,0.002174371,0.0001496549,0.0003478724,0.001000514,0.0005387235],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001353741,0.001393576,0.9833155,0.00005332965,0.0002216096,0.0004442044,0.0001444705,0.00001069768,0.0003388931,0.00003965133,0.00498127,0.007703017],"study_design_scores_gemma":[0.005072143,0.002282883,0.9888211,0.001002795,0.0001901977,0.00001146839,0.0002149895,0.0006965265,0.0004840822,0.000359806,0.0006924218,0.0001716129],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9716862,0.001810195,0.00001172003,0.02126821,0.00006496404,0.001571129,0.00005148668,0.00006136479,0.003474681],"genre_scores_gemma":[0.9902923,0.002500168,0.000336616,0.001313463,0.0003852166,0.001135557,0.00005136137,0.00003408833,0.00395121],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01995475,"threshold_uncertainty_score":0.8251621,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2999401147","doi":"10.1158/0008-5472.can-19-2080","title":"Tumor Cell–Derived IL1β Promotes Desmoplasia and Immune Suppression in Pancreatic Cancer","year":2020,"lang":"en","type":"article","venue":"Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":371,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Desmoplasia; Pancreatic cancer; Immune system; Cancer; Biology; Cancer research; Medicine; Pathology; Immunology; Internal medicine","authors":[{"name":"Shipra Das","is_ca":false},{"name":"Beny Shapiro","is_ca":false},{"name":"Emily Vucic","is_ca":false},{"name":"Sandra Vogt","is_ca":false},{"name":"Dafna Bar‐Sagi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09124923583697828,"gpt":0.4199457631409499,"spread":0.3286965273039716,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008034062,0.0001829527,0.0006659468,0.0002186878,0.0001781563,0.00003714503,0.0002053122,0.0001341827,0.001925855],"category_scores_gemma":[0.0005569966,0.0001452617,0.00004882413,0.0006911927,0.0004795775,0.00009860795,0.000251523,0.001030285,0.00005971685],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002965838,"about_ca_system_score_gemma":0.001236834,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002248269,"about_ca_topic_score_gemma":0.0001967119,"domain_scores_codex":[0.9972427,0.0003666451,0.0003484713,0.0005351193,0.0006934429,0.0008136366],"domain_scores_gemma":[0.9984894,0.0004135298,0.00005096313,0.0002839032,0.000250446,0.0005117127],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001362137,0.0001486291,0.48936,0.0009842492,0.00005780192,0.0003643256,0.002421574,0.000002328643,0.5006701,0.00002698068,0.00235539,0.002246552],"study_design_scores_gemma":[0.007628598,0.001537173,0.7264331,0.001485817,0.0001255469,0.00004405126,0.001727033,0.003562643,0.2539862,0.0002311663,0.002897664,0.0003409767],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9774494,0.009492178,0.00001082223,0.008997147,0.00004644903,0.001316919,0.00001975525,0.00003640861,0.002630889],"genre_scores_gemma":[0.9937044,0.003274367,0.0002919074,0.0003320607,0.0002212726,0.0008487657,0.00001139519,0.00004049517,0.001275362],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2466839,"threshold_uncertainty_score":0.9989865,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2232697670","doi":"10.1158/2159-8290.cd-15-0402","title":"Whole Genome Sequencing Defines the Genetic Heterogeneity of Familial Pancreatic Cancer","year":2015,"lang":"en","type":"article","venue":"Cancer Discovery","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":366,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Center for Advancing Translational Sciences; National Institute of Mental Health; National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Howard Hughes Medical Institute","keywords":"Pancreatic cancer; CDKN2A; Biology; Genetics; Cancer; Germline mutation; Genetic heterogeneity; Germline; Exome sequencing; PALB2; Genome; Hereditary pancreatitis; Gene; Mutation; Phenotype; Trypsinogen","authors":[{"name":"Nicholas J. Roberts","is_ca":false},{"name":"Alexis L. Norris","is_ca":false},{"name":"Gloria M. Petersen","is_ca":false},{"name":"Melissa L. Bondy","is_ca":false},{"name":"Randall E. Brand","is_ca":false},{"name":"Steven Gallinger","is_ca":true},{"name":"Robert C. Kurtz","is_ca":false},{"name":"Sara H. Olson","is_ca":false},{"name":"Anil K. Rustgi","is_ca":false},{"name":"Ann G. Schwartz","is_ca":false},{"name":"Elena M. Stoffel","is_ca":false},{"name":"Sapna Syngal","is_ca":false},{"name":"George Zogopoulos","is_ca":true},{"name":"Syed Z. Ali","is_ca":false},{"name":"Jennifer E. Axilbund","is_ca":false},{"name":"Kari G. Chaffee","is_ca":false},{"name":"Yunching Chen","is_ca":false},{"name":"Michele L. Coté","is_ca":false},{"name":"Erica J. Childs","is_ca":false},{"name":"Christopher Douville","is_ca":false},{"name":"Fernando S. Goes","is_ca":false},{"name":"Joseph M. Herman","is_ca":false},{"name":"Christine A. Iacobuzio–Donahue","is_ca":false},{"name":"Melissa Kramer","is_ca":false},{"name":"Alvin P. Makohon-Moore","is_ca":false},{"name":"W. Richard McCombie","is_ca":false},{"name":"K. Wyatt McMahon","is_ca":false},{"name":"Noushin Niknafs","is_ca":false},{"name":"Jennifer Parla","is_ca":false},{"name":"Mehdi Pirooznia","is_ca":false},{"name":"James B. Potash","is_ca":false},{"name":"Andrew D. Rhim","is_ca":false},{"name":"Alyssa Smith","is_ca":true},{"name":"Yuxuan Wang","is_ca":false},{"name":"Christopher L. Wolfgang","is_ca":false},{"name":"Laura D. Wood","is_ca":false},{"name":"Peter P. Zandi","is_ca":false},{"name":"Michael Goggins","is_ca":false},{"name":"Rachel Karchin","is_ca":false},{"name":"James R. Eshleman","is_ca":false},{"name":"Nickolas Papadopoulos","is_ca":false},{"name":"Kenneth W. Kinzler","is_ca":false},{"name":"Bert Vogelstein","is_ca":false},{"name":"Ralph H. Hruban","is_ca":false},{"name":"Alison P. Klein","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08514090614727875,"gpt":0.3590900383823112,"spread":0.2739491322350324,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002796589,0.0001637096,0.0005353286,0.00005958372,0.00007585019,0.00002007247,0.0001872148,0.000088237,0.00007725334],"category_scores_gemma":[0.000124852,0.000102537,0.0001142824,0.0002167154,0.0003573798,0.0001093751,0.00009110611,0.0001826728,0.00002115352],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005326794,"about_ca_system_score_gemma":0.002178017,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004288226,"about_ca_topic_score_gemma":0.0007591014,"domain_scores_codex":[0.9985402,0.0001007298,0.0003265696,0.0002628609,0.0004098995,0.0003597589],"domain_scores_gemma":[0.9989631,0.0001065762,0.0001196981,0.0004372379,0.0001946737,0.0001787754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003862702,0.00006434073,0.9463858,0.0002303158,0.0003617808,0.00003477831,0.0008862171,0.0005685876,0.04868795,0.00006031928,0.001212115,0.001121548],"study_design_scores_gemma":[0.002575938,0.0004565829,0.9834374,0.0003125572,0.0009484983,0.00005915962,0.001134776,0.001245575,0.004939371,0.0003865494,0.004259752,0.0002438765],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9813044,0.01492557,0.0003202883,0.0009672171,0.0002485166,0.0004721952,0.000131244,0.00001882128,0.001611712],"genre_scores_gemma":[0.9940406,0.00186051,0.0002578626,0.0005910537,0.0005159465,0.0002618489,0.00001647002,0.00002462915,0.002431086],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04374857,"threshold_uncertainty_score":0.6482543,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3011562658","doi":"10.1158/1078-0432.ccr-19-3724","title":"GATA6 Expression Distinguishes Classical and Basal-like Subtypes in Advanced Pancreatic Cancer","year":2020,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":346,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; McGill University Health Centre; McGill University; University Health Network; Kingston General Hospital; Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"Pancreatic Cancer Canada Foundation; Canadian Cancer Society Research Institute; Hebrew University of Jerusalem; Government of Ontario; Princess Margaret Cancer Foundation","keywords":"Pancreatic cancer; GATA6; In situ hybridization; Biology; Basal (medicine); Internal medicine; FOLFIRINOX; Oncology; KRAS; Cancer research; Pathology; Medicine; Cancer; Gene expression; Gene; Genetics; Colorectal cancer","authors":[{"name":"Grainne M. O’Kane","is_ca":true},{"name":"Barbara T. Grünwald","is_ca":true},{"name":"Gun-Ho Jang","is_ca":true},{"name":"Mehdi Masoomian","is_ca":true},{"name":"Sarah Picardo","is_ca":true},{"name":"Robert C. Grant","is_ca":true},{"name":"Robert E. Denroche","is_ca":true},{"name":"Amy Zhang","is_ca":true},{"name":"Yifan Wang","is_ca":true},{"name":"Jessica K. Miller","is_ca":true},{"name":"Bernard Lam","is_ca":true},{"name":"Paul M. Krzyzanowski","is_ca":true},{"name":"Ilinca M. Lungu","is_ca":true},{"name":"John M.S. Bartlett","is_ca":true},{"name":"Melanie Peralta","is_ca":true},{"name":"Foram Vyas","is_ca":true},{"name":"Rama Khokha","is_ca":true},{"name":"James Biagi","is_ca":true},{"name":"Dianne Chadwick","is_ca":true},{"name":"Stephanie Ramotar","is_ca":true},{"name":"Shawn Hutchinson","is_ca":true},{"name":"Anna Dodd","is_ca":true},{"name":"Julie M. Wilson","is_ca":true},{"name":"Faiyaz Notta","is_ca":true},{"name":"George Zogopoulos","is_ca":true},{"name":"Steven Gallinger","is_ca":true},{"name":"Jennifer J. Knox","is_ca":true},{"name":"Sandra E. Fischer","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2617640132675826,"gpt":0.5403275624752844,"spread":0.2785635492077017,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002162938,0.0001954115,0.0009942559,0.000128246,0.0001625209,0.00003701318,0.0002543516,0.0002945168,0.001009178],"category_scores_gemma":[0.006819094,0.0001484966,0.00009996544,0.0006429129,0.00109945,0.00009333575,0.0003757573,0.001889285,0.00006374352],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002028778,"about_ca_system_score_gemma":0.001180138,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009623083,"about_ca_topic_score_gemma":0.0005551918,"domain_scores_codex":[0.9958881,0.0008028215,0.0007408954,0.0008454975,0.0009004159,0.0008223117],"domain_scores_gemma":[0.995151,0.003099877,0.00008104865,0.0003724141,0.0003532913,0.0009423399],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003880388,0.0002453999,0.960317,0.000378777,0.00005412116,0.0002294133,0.000389925,0.000002544455,0.002817504,0.00005740779,0.01293329,0.01869423],"study_design_scores_gemma":[0.006210494,0.00181002,0.9571362,0.00117145,0.00009005749,0.000005562054,0.0006186257,0.004345213,0.000729043,0.0004904456,0.02713416,0.0002587762],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.964618,0.005319828,0.00002405093,0.02562513,0.0001492844,0.0008841901,0.00002269871,0.00004669369,0.003310108],"genre_scores_gemma":[0.984184,0.009834072,0.0007016143,0.00171514,0.0009626903,0.0005053713,0.00001270276,0.00004141706,0.002042989],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02390999,"threshold_uncertainty_score":0.999904,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}