{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":1429,"total_is_capped":false,"direct_labels_cover":1,"predictions_cover":1429,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"7e85716a4ddd","filters":{"topic":"Plant pathogens and resistance mechanisms"}},"results":[{"id":"W2128606612","doi":"10.1371/journal.pgen.1002230","title":"Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea","year":2011,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":1073,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Institut National de la Recherche Agronomique; Grains Research and Development Corporation; Deutsche Forschungsgemeinschaft; Infrastructures en Biologie Santé et Agronomie; National Science Foundation; Bio-Protection Research Centre; European Commission; Broad Institute; Agence Nationale de la Recherche; Natural Sciences and Engineering Research Council of Canada; U.S. Department of Agriculture","keywords":"Sclerotinia sclerotiorum; Biology; Botrytis cinerea; Genome; Botrytis; Mating type; Genetics; Genome evolution; Gene; Botany","authors":[{"name":"Joëlle Amselem","is_ca":false},{"name":"Christina A. Cuomo","is_ca":false},{"name":"J.A.L. van Kan","is_ca":false},{"name":"Muriel Viaud","is_ca":false},{"name":"Ernesto P. Benito","is_ca":false},{"name":"Arnaud Couloux","is_ca":false},{"name":"Pedro M. Coutinho","is_ca":false},{"name":"Ronald P. de Vries","is_ca":false},{"name":"Paul S. Dyer","is_ca":false},{"name":"Sabine Fillinger","is_ca":false},{"name":"Elisabeth Fournier","is_ca":false},{"name":"Lilian Gout","is_ca":false},{"name":"Matthias Hahn","is_ca":false},{"name":"Linda M. Kohn","is_ca":true},{"name":"Nicolas Lapalu","is_ca":false},{"name":"Kim M. Plummer","is_ca":false},{"name":"Jean‐Marc Pradier","is_ca":false},{"name":"Emmanuel Quévillon","is_ca":false},{"name":"Amir Sharon","is_ca":false},{"name":"Adeline Simon","is_ca":false},{"name":"Arjen ten Have","is_ca":false},{"name":"Bettina Tudzynski","is_ca":false},{"name":"Paul Tudzynski","is_ca":false},{"name":"Patrick Wincker","is_ca":false},{"name":"Marion Andrew","is_ca":true},{"name":"Véronique Anthouard","is_ca":false},{"name":"Ross E. Beever","is_ca":false},{"name":"Rolland Beffa","is_ca":false},{"name":"Isabelle Benoit","is_ca":false},{"name":"Ourdia Bouzid","is_ca":false},{"name":"Baptiste Brault","is_ca":false},{"name":"Zehua Chen","is_ca":false},{"name":"Mathias Choquer","is_ca":false},{"name":"Jérôme Collemare","is_ca":false},{"name":"Pascale Cotton","is_ca":false},{"name":"Étienne Danchin","is_ca":false},{"name":"Corinne Da Silva","is_ca":false},{"name":"Angélique Gautier","is_ca":false},{"name":"Corinne Giraud","is_ca":false},{"name":"Tatiana Giraud","is_ca":false},{"name":"Celedonio González","is_ca":false},{"name":"Sandrine Grossetête","is_ca":false},{"name":"Ulrich Güldener","is_ca":false},{"name":"Bernard Henrissat","is_ca":false},{"name":"Barbara J. Howlett","is_ca":false},{"name":"Chinnappa D. Kodira","is_ca":false},{"name":"Matthias Kretschmer","is_ca":false},{"name":"Anne Lappartient","is_ca":false},{"name":"Michaela Leroch","is_ca":false},{"name":"Caroline Levis","is_ca":false},{"name":"Evan Mauceli","is_ca":false},{"name":"Cécile Neuvéglise","is_ca":false},{"name":"Birgitt Oeser","is_ca":false},{"name":"Matthew D. Pearson","is_ca":false},{"name":"Julie Poulain","is_ca":false},{"name":"Nathalie Poussereau","is_ca":false},{"name":"Hadi Quesneville","is_ca":false},{"name":"Christine Rascle","is_ca":false},{"name":"Julia Schumacher","is_ca":false},{"name":"Béatrice Segurens","is_ca":false},{"name":"Adrienne Sexton","is_ca":false},{"name":"Evelyn Silva","is_ca":false},{"name":"Catherine Sirven","is_ca":false},{"name":"Darren M. Soanes","is_ca":false},{"name":"Nicholas J. Talbot","is_ca":false},{"name":"Templeton Matt","is_ca":false},{"name":"Chandri Yandava","is_ca":false},{"name":"Oded Yarden","is_ca":false},{"name":"Qiandong Zeng","is_ca":false},{"name":"Jeffrey A. Rollins","is_ca":false},{"name":"Marc‐Henri Lebrun","is_ca":false},{"name":"Marty Dickman","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0374455374335888,"gpt":0.1774381271065197,"spread":0.1399925896729309,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009544168,0.0001328277,0.0002410589,0.00002391809,0.0001666953,0.00001743111,0.0002684363,0.00008778796,0.0002000964],"category_scores_gemma":[0.00001001245,0.00004568508,0.0001476406,0.0005227532,0.00008636242,0.00001652994,0.0001305859,0.00007655589,0.000004521019],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007782979,"about_ca_system_score_gemma":0.000006562973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002212762,"about_ca_topic_score_gemma":0.0007367411,"domain_scores_codex":[0.9990527,0.00005757447,0.0002271436,0.0002470852,0.000179999,0.0002354944],"domain_scores_gemma":[0.9995783,0.00002717864,0.0001357642,0.0001225322,0.00005550274,0.00008072448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000009481783,0.00005622073,0.1353075,0.000004438628,0.0001251421,0.000002136739,0.00006992657,0.00001140671,0.8627533,0.00009498194,0.000007879469,0.001557593],"study_design_scores_gemma":[0.00006432424,0.0001019756,0.9308057,0.00001427573,0.000472978,0.000003621722,0.00008421444,0.0009960408,0.06711083,0.0001235977,0.00009637468,0.0001260268],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986376,0.0004270744,0.000004449728,0.00007083016,0.00006452935,0.0001822283,0.0003353075,0.00001712301,0.0002608348],"genre_scores_gemma":[0.9992423,0.0002583072,0.0002810716,0.00007573921,0.00005210059,0.000007062461,0.00001331171,0.000001530147,0.00006858466],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7956425,"threshold_uncertainty_score":0.2190915,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2109363563","doi":"10.1016/j.soilbio.2004.10.021","title":"Identification and use of potential bacterial organic antifungal volatiles in biocontrol","year":2004,"lang":"en","type":"article","venue":"Soil Biology and Biochemistry","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":531,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"","keywords":"Sclerotinia sclerotiorum; Mycelium; Chemistry; Nonanal; Botany; Biology; Chromatography","authors":[{"name":"W. G. Dilantha Fernando","is_ca":true},{"name":"Rajesh Ramarathnam","is_ca":true},{"name":"Akkanas S. Krishnamoorthy","is_ca":false},{"name":"Sarah C. Savchuk","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006619581371723545,"gpt":0.1877406796226167,"spread":0.1811210982508932,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000878915,0.00007866355,0.000124082,0.000007966537,0.00005630862,0.00001883578,0.00005108797,0.0001725408,0.00002651532],"category_scores_gemma":[0.00002745556,0.00003358853,0.00002212016,0.00006794779,0.0001111031,0.00003759909,0.00003087597,0.00005297353,6.572154e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005490112,"about_ca_system_score_gemma":0.000007617824,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005066794,"about_ca_topic_score_gemma":0.0002139131,"domain_scores_codex":[0.999473,0.00002027898,0.0001566157,0.0002014259,0.00003028458,0.0001183704],"domain_scores_gemma":[0.9998221,0.00002612801,0.00006969021,0.00002946198,0.00001987357,0.00003273063],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005179124,0.00002994187,0.007082477,0.000009361932,0.000005376492,0.000002796708,0.000006249657,3.388132e-7,0.9905556,0.00006892149,0.000002752093,0.002184434],"study_design_scores_gemma":[0.0002720969,0.00004911764,0.136692,0.00001882792,0.000008081824,0.00001842941,0.00004788341,0.00001283117,0.8621198,0.000625785,0.00004577614,0.00008939169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992281,0.0002606643,0.00001041589,0.0001747692,0.00006557813,0.00005650133,0.0001898622,0.000008956847,0.000005183339],"genre_scores_gemma":[0.9995307,0.0001842697,0.00002707555,0.00001642521,0.00007638819,0.00000241007,0.000127625,4.198064e-7,0.0000346487],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1296095,"threshold_uncertainty_score":0.1369701,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1975331444","doi":"10.1093/emboj/cdg547","title":"Cytosolic HSP90 associates with and modulates the Arabidopsis RPM1 disease resistance protein","year":2003,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":401,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; University of North Carolina at Chapel Hill; National Science Foundation","keywords":"Biology; Arabidopsis; Cytosol; Hsp90; Cell biology; Genetics; Biochemistry; Gene; Enzyme; Heat shock protein; Mutant","authors":[{"name":"David A. Hubert","is_ca":false},{"name":"Pablo Tornero","is_ca":false},{"name":"Youssef Belkhadir","is_ca":false},{"name":"Priti Krishna","is_ca":true},{"name":"Akira Takahashi","is_ca":false},{"name":"Ken Shirasu","is_ca":false},{"name":"Jeffery L. Dangl","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01100982361642967,"gpt":0.1826236209057843,"spread":0.1716137972893546,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005762975,0.0001220726,0.0001190256,0.00000500854,0.0009991648,0.0001902801,0.0002217105,0.00002754534,0.00006918005],"category_scores_gemma":[0.00006735448,0.00002559688,0.00005619507,0.000154615,0.00009208933,0.00006900277,0.00001904553,0.0002028644,0.000005052219],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001532814,"about_ca_system_score_gemma":0.00001498747,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005443177,"about_ca_topic_score_gemma":0.0003121016,"domain_scores_codex":[0.9989961,0.0002241496,0.0001321012,0.000137556,0.0002432628,0.0002667622],"domain_scores_gemma":[0.9995331,0.0001044855,0.0001332136,0.00006022714,0.00004807234,0.0001209574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005974624,0.0002130877,0.0134677,0.00002464645,0.0002082431,0.0002413506,0.0005505453,0.00009466161,0.9527292,0.02321721,0.002238666,0.00641725],"study_design_scores_gemma":[0.001488281,0.000714874,0.6559524,0.0007964353,0.0003757786,0.001072791,0.004267477,0.0002449685,0.03792949,0.183806,0.1118316,0.001519996],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99252,0.001713531,0.000009148168,0.004818731,0.00004279797,0.0001716609,0.0000297036,0.00001482604,0.0006796207],"genre_scores_gemma":[0.9971637,0.0002146139,0.00007857306,0.0002053557,0.0001452303,0.00001167002,0.000001794407,0.000001291248,0.002177805],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9147997,"threshold_uncertainty_score":0.7684868,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1969772334","doi":"10.2134/agronj2002.1980","title":"Managing Plant Disease Risk in Diversified Cropping Systems","year":2002,"lang":"en","type":"article","venue":"Agronomy Journal","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":390,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Blight; Agronomy; Biology; Sclerotinia; Crop rotation; Ascochyta; Crop; Disease management; Weed control; Cropping; Cultural control; Sclerotinia sclerotiorum; Fungicide; Plant disease; Agroforestry; Agriculture; Biotechnology; Horticulture","authors":[{"name":"J. M. Krupinsky","is_ca":false},{"name":"K. L. Bailey","is_ca":false},{"name":"Marcia McMullen","is_ca":false},{"name":"B. D. Gossen","is_ca":false},{"name":"T. Kelly Turkington","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02208699940448086,"gpt":0.1708139561011561,"spread":0.1487269566966752,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002331948,0.00009192854,0.0001173581,0.00002199133,0.0003384073,0.0001433331,0.0001642584,0.00003176132,0.0003005827],"category_scores_gemma":[0.000009884647,0.0000338245,0.00006926241,0.0001065448,0.00001413904,0.0001284814,0.00003129281,0.0001768145,0.00004103389],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004175466,"about_ca_system_score_gemma":0.000002449445,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008930536,"about_ca_topic_score_gemma":0.0001363971,"domain_scores_codex":[0.9991889,0.00008430306,0.0001791218,0.000147995,0.0001356905,0.0002639852],"domain_scores_gemma":[0.99962,0.00005082764,0.0001168748,0.00002881935,0.0000138497,0.0001696936],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005410637,0.0009205901,0.4557236,0.00009926894,0.0002694602,0.0100706,0.001260416,0.008384313,0.153289,0.004114418,0.02537713,0.3399501],"study_design_scores_gemma":[0.001070425,0.0001643091,0.905323,0.0006243649,0.00008067141,0.0004498223,0.003161927,0.0196598,0.0001380598,0.00179779,0.0666645,0.000865343],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953632,0.002253424,0.00006651715,0.0004416535,0.0002702957,0.00008770586,0.0001051653,0.00001795866,0.001394035],"genre_scores_gemma":[0.998552,0.0006726487,0.00003187744,0.00003557199,0.0002436239,0.000002693751,0.00001039415,5.298666e-7,0.0004506681],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4495994,"threshold_uncertainty_score":0.329117,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2013201221","doi":"10.1093/jhered/91.6.429","title":"Integration of simple sequence repeat (SSR) markers into a molecular linkage map of common bean (Phaseolus vulgaris L.)","year":2000,"lang":"en","type":"article","venue":"Journal of Heredity","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":282,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Phaseolus; Genetics; Microsatellite; Genetic linkage; Genetic marker; Population; Gene mapping; Molecular marker; Expressed sequence tag; Gene; Genome; Allele; Botany; Chromosome","authors":[{"name":"Kangfu Yu","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01583287133309477,"gpt":0.2389260916960943,"spread":0.2230932203629995,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005300317,0.000103139,0.0003035664,0.0000181662,0.0000635814,0.0000139513,0.0002382153,0.0001000499,0.0005136786],"category_scores_gemma":[0.00003619449,0.00004041017,0.0001809054,0.0001366163,0.00006432477,0.0001127866,0.00001954751,0.0001767908,0.000002374403],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003341266,"about_ca_system_score_gemma":0.00001799136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002924056,"about_ca_topic_score_gemma":0.0006616794,"domain_scores_codex":[0.9987921,0.0001267033,0.0005166215,0.0001102039,0.0003198739,0.0001345041],"domain_scores_gemma":[0.9991824,0.00007989725,0.0004451914,0.00006295257,0.0001467197,0.0000828374],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001591603,0.0001097633,0.0004100202,0.00001867972,0.00001869333,0.00008142736,0.00005413129,0.00002588715,0.9564827,0.00002800865,0.000648231,0.04196327],"study_design_scores_gemma":[0.0007531832,0.002991336,0.0335944,0.0004754539,0.0001246983,0.0002393973,0.001086455,0.0005660376,0.937991,0.008552759,0.01324687,0.0003784233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986659,0.0003242123,0.000116273,0.000305724,0.0001217229,0.00007386572,0.0001012829,0.000005847091,0.0002851352],"genre_scores_gemma":[0.9988723,0.0001303741,0.0007039208,0.00004453873,0.0001211173,5.889428e-7,0.00002542278,8.80688e-7,0.0001008382],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04158484,"threshold_uncertainty_score":0.562442,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2589006132","doi":"10.1093/gbe/evx030","title":"The Complete Genome Sequence of the Phytopathogenic Fungus Sclerotinia sclerotiorum Reveals Insights into the Genome Architecture of Broad Host Range Pathogens","year":2017,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":257,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Biotechnology and Biological Sciences Research Council; National Institute of Food and Agriculture; Directorate for Biological Sciences; Agence Nationale de la Recherche; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Curtin University of Technology; Australian Government; Grains Research and Development Corporation; Government of Western Australia; Government of Canada; Koninklijke Nederlandse Akademie van Wetenschappen; Saskatchewan Canola Development Commission; U.S. Department of Agriculture","keywords":"Sclerotinia sclerotiorum; Biology; Genome; Effector; Genetics; Gene; Virulence; Genome evolution; Botany; Cell biology","authors":[{"name":"Mark C. Derbyshire","is_ca":false},{"name":"Matthew Denton‐Giles","is_ca":false},{"name":"Dwayne D. Hegedus","is_ca":true},{"name":"Shirin Seifbarghy","is_ca":true},{"name":"Jeffrey A. Rollins","is_ca":false},{"name":"J.A.L. van Kan","is_ca":false},{"name":"Michael Seidl","is_ca":false},{"name":"Luigi Faino","is_ca":false},{"name":"Malick Mbengué","is_ca":false},{"name":"Olivier Navaud","is_ca":false},{"name":"Sylvain Raffaele","is_ca":false},{"name":"Stephanie C. Heard","is_ca":false},{"name":"Richard P. Oliver","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02289879212057392,"gpt":0.2169107662010039,"spread":0.19401197408043,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0006291572,0.000211412,0.0003090267,0.00001383214,0.002499383,0.00004229306,0.001015568,0.0001928506,0.00001585898],"category_scores_gemma":[0.00008026144,0.00006083079,0.0001763975,0.0001590235,0.001072258,0.00005394384,0.000345033,0.0002177285,0.000006624159],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003398315,"about_ca_system_score_gemma":0.00001953542,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001498538,"about_ca_topic_score_gemma":0.001581689,"domain_scores_codex":[0.9983789,0.0003285307,0.0003799919,0.000365845,0.0001578685,0.0003889051],"domain_scores_gemma":[0.9987062,0.0001452807,0.0005753189,0.0003898111,0.000118261,0.00006508605],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005958493,0.00001702926,0.01134951,0.00001313318,0.00002643805,9.855117e-7,0.0002442561,0.000009283297,0.9847966,0.001736552,0.000001990032,0.001744568],"study_design_scores_gemma":[0.0001457678,0.0001923902,0.9871848,0.00002836799,0.00003309883,0.00001788012,0.0001611354,0.00001546951,0.0007418277,0.005150372,0.00618202,0.0001468737],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9884138,0.008684572,0.00005033785,0.001160604,0.00033159,0.0005453741,0.0007002817,0.00001419073,0.00009920997],"genre_scores_gemma":[0.9979745,0.001445429,0.00004754967,0.00008099426,0.0002370595,0.00002701132,0.0000459788,0.000002184835,0.0001392969],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9840549,"threshold_uncertainty_score":0.9987992,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2765218814","doi":"10.1111/nph.14842","title":"A cerato‐platanin protein SsCP1 targets plant PR1 and contributes to virulence of <i>Sclerotinia sclerotiorum</i>","year":2017,"lang":"en","type":"article","venue":"New Phytologist","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":244,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Higher Education Discipline Innovation Project; Tsinghua University; National Natural Science Foundation of China; Fundamental Research Funds for the Central Universities; University of Saskatchewan","keywords":"Sclerotinia sclerotiorum; Biology; Alternaria brassicicola; Botrytis cinerea; Virulence; Microbiology; Nicotiana benthamiana; Complementation; Plant defense against herbivory; Apoplast; Botany; Plant disease resistance; Salicylic acid; Arabidopsis; Mutant; Cell wall; Gene; Genetics","authors":[{"name":"Guogen Yang","is_ca":false},{"name":"Liguang Tang","is_ca":false},{"name":"Yingdi Gong","is_ca":false},{"name":"Jiǎtāo Xiè","is_ca":false},{"name":"Yànpíng Fù","is_ca":false},{"name":"Dàohóng Jiāng","is_ca":false},{"name":"Guoqing Li","is_ca":false},{"name":"David B. Collinge","is_ca":false},{"name":"Weidong Chen","is_ca":false},{"name":"Jiāsēn Chéng","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02473932708205233,"gpt":0.2227227846183423,"spread":0.19798345753629,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000217085,0.0001791757,0.0003349594,0.00001205347,0.0004764604,0.0001307396,0.0004669924,0.0001240766,0.00004326248],"category_scores_gemma":[0.0001493746,0.00007320175,0.00005592103,0.00008034927,0.0001608273,0.0001116752,0.0001778221,0.0001070724,0.00001667364],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001169152,"about_ca_system_score_gemma":0.00001749081,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003481811,"about_ca_topic_score_gemma":0.002756666,"domain_scores_codex":[0.9988185,0.00003341684,0.0002474165,0.0003879051,0.0001658547,0.0003469483],"domain_scores_gemma":[0.9993405,0.00005429017,0.0002379443,0.0001467291,0.00005597515,0.0001645119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001033533,0.00004480695,0.008803253,0.00001293134,0.00001055029,0.00001591213,0.00001294727,7.913221e-7,0.9801285,0.002907812,0.001173731,0.006785417],"study_design_scores_gemma":[0.0005228103,0.0004887749,0.4365444,0.0003004212,0.00001656648,0.00001598762,0.00006103308,0.00002461565,0.5389583,0.002318684,0.02042011,0.0003282627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950133,0.0003916042,0.00007668338,0.002479666,0.0001368843,0.0005972602,0.0006753252,0.00004497455,0.0005843096],"genre_scores_gemma":[0.9984897,0.00005826495,0.0007233624,0.0001959157,0.0001082856,0.00003013099,0.00002750296,0.000001319901,0.0003654763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4411702,"threshold_uncertainty_score":0.3664596,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2083231301","doi":"10.1111/j.1365-313x.2011.04578.x","title":"Role of camalexin, indole glucosinolates, and side chain modification of glucosinolate‐derived isothiocyanates in defense of Arabidopsis against <i>Sclerotinia sclerotiorum</i>","year":2011,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":210,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Trinity Western University; Western University","funders":"Japan Society for the Promotion of Science; Oregon State University","keywords":"Glucosinolate; Sclerotinia sclerotiorum; Myrosinase; Botrytis cinerea; Arabidopsis; Isothiocyanate; Biology; Arabidopsis thaliana; Brassicaceae; Mutant; Biochemistry; Botany; Brassica; Gene","authors":[{"name":"Henrik U. Stotz","is_ca":false},{"name":"Yuji Sawada","is_ca":false},{"name":"Yukihisa Shimada","is_ca":false},{"name":"Masami Yokota Hirai","is_ca":false},{"name":"Eriko Sasaki","is_ca":false},{"name":"Markus Krischke","is_ca":false},{"name":"P. D. Brown","is_ca":true},{"name":"Kazuki Saito","is_ca":false},{"name":"Yuji Kamiya","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03091234410308154,"gpt":0.1859486289578446,"spread":0.155036284854763,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005664135,0.0001276022,0.0002899084,0.00004341622,0.00009817828,0.00001207657,0.0002539472,0.00009267501,0.00001837381],"category_scores_gemma":[0.0000272225,0.00004851434,0.00007393921,0.0001998801,0.0001057039,0.0000774881,0.00004425918,0.0001722835,9.098113e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001105194,"about_ca_system_score_gemma":0.00001375381,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002396764,"about_ca_topic_score_gemma":0.0005451862,"domain_scores_codex":[0.9988424,0.0001256829,0.0004956516,0.000135684,0.0001872044,0.0002133782],"domain_scores_gemma":[0.9991655,0.0001095899,0.0005162454,0.00006256313,0.00008430607,0.00006178858],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001915853,0.000107841,0.006346938,0.0000123496,0.00001987748,0.000003774136,0.0007138102,0.00002676156,0.9867472,0.000379986,0.00000354273,0.00544631],"study_design_scores_gemma":[0.000322969,0.0002097488,0.2804986,0.0002553661,0.00002371795,0.00007870473,0.001497573,0.0005012449,0.714497,0.001973174,0.00001756068,0.0001243456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979074,0.001170814,0.000006562764,0.00005753961,0.00003657909,0.0001566043,0.0002077451,0.000006613041,0.0004501599],"genre_scores_gemma":[0.9982922,0.001456062,0.0001750391,0.00002379943,0.000026425,0.00000274757,0.00001547558,0.000001520333,0.000006700085],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2741516,"threshold_uncertainty_score":0.1978357,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1802895072","doi":"10.1016/j.femsle.2005.07.040","title":"<i>Sclerotinia sclerotiorum</i>: When âto be or not to beâ a pathogen?","year":2005,"lang":"sah","type":"review","venue":"FEMS Microbiology Letters","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":210,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Sclerotinia sclerotiorum; Biology; Pathogen; Microbiology; Enzyme; Oxalic acid; Botrytis cinerea; Mycelium; Secretion; Sclerotinia; Proteases; Host (biology); Biochemistry; Botany; Ecology","authors":[{"name":"Dwayne D. Hegedus","is_ca":true},{"name":"S. R. Rimmer","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0569716442826757,"gpt":0.2638509836343715,"spread":0.2068793393516958,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","insufficient_payload"],"category_scores_codex":[0.001070051,0.001785518,0.003119049,0.0001883712,0.0008942725,0.0002607558,0.002272379,0.001701231,0.004642286],"category_scores_gemma":[0.0001112813,0.0007529316,0.001347596,0.0008801673,0.0004123686,0.0001422848,0.0007456259,0.001214056,0.002886215],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002828209,"about_ca_system_score_gemma":0.0001215914,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009755458,"about_ca_topic_score_gemma":0.001898585,"domain_scores_codex":[0.9920278,0.0008323194,0.001805634,0.002591849,0.0003057071,0.00243667],"domain_scores_gemma":[0.9971425,0.0005092927,0.0009513809,0.0005789531,0.0001366384,0.0006812675],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001886288,0.0001620421,0.00001861154,0.0002626952,0.0001881506,0.0002098428,0.0001559161,0.000002847692,0.7979438,0.00002155217,0.05003173,0.1508142],"study_design_scores_gemma":[0.0003901158,0.0006662988,0.0003138824,0.00302321,0.0004329672,0.0006530204,0.0001029692,6.072363e-7,0.001381995,0.000002987967,0.9912145,0.001817485],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.3395102,0.4896197,0.000143651,0.09183709,0.01099984,0.01298356,0.05356689,0.0008786706,0.0004603632],"genre_scores_gemma":[0.002861382,0.8244382,0.005188123,0.1344961,0.008468927,0.0007144684,0.009319264,0.00009671222,0.01441692],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9411827,"threshold_uncertainty_score":0.9995947,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2032388006","doi":"10.1080/07060660109506914","title":"Research on biology and control of <i>Sclerotinia</i> diseases in Canada <sup>1</sup>","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Plant Pathology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":207,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":true},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Sclerotinia sclerotiorum; Sclerotinia; Biology; Minor (academic); Humanities; Botany; Art","authors":[{"name":"Sylvie D. Bardin","is_ca":true},{"name":"Hsiao‐Wen Huang","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02550775392467696,"gpt":0.2260202739482163,"spread":0.2005125200235393,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005028296,0.00009446029,0.000314201,0.0001077922,0.00009665921,0.000009707291,0.0002159062,0.00009074618,0.00009481086],"category_scores_gemma":[0.00009578343,0.00004033581,0.00003640379,0.0002196025,0.0001203475,0.0000279842,0.00000959822,0.0002533648,0.000001268625],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001001281,"about_ca_system_score_gemma":0.0005813537,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.4385469,"about_ca_topic_score_gemma":0.988123,"domain_scores_codex":[0.9986596,0.0003158013,0.0003177953,0.0001510716,0.0001244928,0.0004312888],"domain_scores_gemma":[0.9988745,0.0004808001,0.000123995,0.00004019943,0.00009388535,0.0003865598],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005725112,0.00008682151,0.7633675,0.0000207701,0.00004000375,0.01490979,0.000170992,0.0004569625,0.1955448,0.002726083,0.002974096,0.01912971],"study_design_scores_gemma":[0.00127954,0.001854489,0.9532415,0.000226449,0.00002533213,0.003040956,0.002661264,0.0002010033,0.0008975784,0.00150042,0.03475549,0.0003159471],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956223,0.001124598,0.000002973061,0.0007721944,0.0001067147,0.00008644417,0.002128168,0.000001163306,0.0001554307],"genre_scores_gemma":[0.9992561,0.0002862342,0.000009199507,0.0002960258,0.0001070338,0.000002001765,0.00002609445,8.695012e-7,0.00001649006],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.549576,"threshold_uncertainty_score":0.5651919,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2010125704","doi":"10.1080/07060660409507151","title":"Climate change and plant diseases in Ontario","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Plant Pathology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":201,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":true},"ca_institutions":"University of Toronto; Canadian Forest Service; University of Guelph","funders":"","keywords":"Agriculture; Abiotic component; Climate change; Agroforestry; Adaptation (eye); Geography; Biology; Ecology","authors":[{"name":"G. J. Boland","is_ca":true},{"name":"M.S. Melzer","is_ca":true},{"name":"A. A. Hopkin","is_ca":true},{"name":"Verna J. Higgins","is_ca":true},{"name":"Annette Nassuth","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02683849643715874,"gpt":0.1754971564245444,"spread":0.1486586599873856,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001536239,0.00009078032,0.0002012477,0.00005700262,0.00009244454,0.00002316535,0.0001157744,0.00008218984,0.00006711697],"category_scores_gemma":[0.00001404939,0.00003701983,0.00003910589,0.00006721207,0.00004527592,0.00007332885,0.000009915517,0.0001612031,0.000003326727],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008605303,"about_ca_system_score_gemma":0.0001003247,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.03399191,"about_ca_topic_score_gemma":0.9857606,"domain_scores_codex":[0.9992666,0.00003511387,0.0001979907,0.0001146093,0.00006142513,0.0003242579],"domain_scores_gemma":[0.9994851,0.00003234025,0.00009997127,0.00002149377,0.0000180376,0.0003430792],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003110681,0.0001532553,0.733155,0.00003224112,0.00002750141,0.09894822,0.002370131,0.0000292596,0.13587,0.01052715,0.0004763254,0.01809994],"study_design_scores_gemma":[0.0003017056,0.0003140028,0.9850344,0.0001223312,0.00001296451,0.004393239,0.0001856478,0.000001206372,0.0001270414,0.001191955,0.008186173,0.0001293495],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961034,0.0009599467,8.777284e-7,0.0005178886,0.0002567533,0.00006939212,0.002017542,0.000002811027,0.00007140025],"genre_scores_gemma":[0.9991547,0.0002665404,0.00005598658,0.000308077,0.0001162565,0.000002419697,0.00008385324,6.537861e-7,0.00001147946],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9517687,"threshold_uncertainty_score":0.9724408,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4205754523","doi":"10.1094/php-01-21-0013-rs","title":"Soybean Yield Loss Estimates Due to Diseases in the United States and Ontario, Canada, from 2015 to 2019","year":2021,"lang":"en","type":"article","venue":"Plant Health Progress","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":200,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Ministry of Agriculture, Food and Rural Affairs","funders":"United Soybean Board","keywords":"Sclerotinia sclerotiorum; Sclerotinia; Biology; Crop; Yield (engineering); Heterodera; Agronomy; Horticulture; Nematode; Ecology","authors":[{"name":"Carl A. Bradley","is_ca":false},{"name":"Thomas Wesley Allen","is_ca":false},{"name":"Adam Sisson","is_ca":false},{"name":"Gary C. Bergstrom","is_ca":false},{"name":"Kaitlyn Bissonnette","is_ca":false},{"name":"Jason P. Bond","is_ca":false},{"name":"Emmanuel Byamukama","is_ca":false},{"name":"Martin I. Chilvers","is_ca":false},{"name":"Alyssa Collins","is_ca":false},{"name":"J. P. Damicone","is_ca":false},{"name":"Anne E. Dorrance","is_ca":false},{"name":"Nicholas S. Dufault","is_ca":false},{"name":"Paul D. Esker","is_ca":false},{"name":"Travis Faske","is_ca":false},{"name":"Nicole M. Fiorellino","is_ca":false},{"name":"Loren J. Giesler","is_ca":false},{"name":"G. L. Hartman","is_ca":false},{"name":"C. A. Hollier","is_ca":false},{"name":"Tamra A. Jackson‐Ziems","is_ca":false},{"name":"Douglas J. Jardine","is_ca":false},{"name":"Heather Kelly","is_ca":false},{"name":"Robert C. Kemerait","is_ca":false},{"name":"Nathan M. Kleczewski","is_ca":false},{"name":"Alyssa M. Koehler","is_ca":false},{"name":"Robert J. Kratochvil","is_ca":false},{"name":"James E. Kurle","is_ca":false},{"name":"Dean K. Malvick","is_ca":false},{"name":"Samuel G. Markell","is_ca":false},{"name":"Febina M. Mathew","is_ca":false},{"name":"Hillary L. Mehl","is_ca":false},{"name":"Kelsey Mehl","is_ca":false},{"name":"Daren S. Mueller","is_ca":false},{"name":"John Mueller","is_ca":false},{"name":"Berlin D. Nelson","is_ca":false},{"name":"C. Michael Overstreet","is_ca":false},{"name":"G. B. Padgett","is_ca":false},{"name":"Paul P. Price","is_ca":false},{"name":"Edward J. Sikora","is_ca":false},{"name":"Ian M. Small","is_ca":false},{"name":"Damon L. Smith","is_ca":false},{"name":"Terry Spurlock","is_ca":false},{"name":"C. Tande","is_ca":false},{"name":"Darcy E. P. Telenko","is_ca":false},{"name":"Albert Tenuta","is_ca":true},{"name":"Lindsey D. Thiessen","is_ca":false},{"name":"F. Warner","is_ca":false},{"name":"William J. Wiebold","is_ca":false},{"name":"Kiersten Wise","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02001776478389631,"gpt":0.2412870290087672,"spread":0.2212692642248709,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001604245,0.0001235964,0.0002068063,0.00001310639,0.0002050686,0.00007634998,0.0001713535,0.00003527128,0.00007431398],"category_scores_gemma":[0.00003048265,0.00004386678,0.00001494674,0.000251279,0.00001588647,0.00002540082,0.00006098615,0.0001038265,0.000004004281],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007210035,"about_ca_system_score_gemma":0.0001763497,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9153669,"about_ca_topic_score_gemma":0.9980952,"domain_scores_codex":[0.99885,0.00008881185,0.0001836889,0.0002775833,0.0002195161,0.0003803258],"domain_scores_gemma":[0.9992002,0.0003804042,0.00004755335,0.0000607429,0.00003349999,0.0002776335],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006727934,0.000800691,0.6800727,0.0002031235,0.00007824338,0.006754082,0.007840129,0.0001960498,0.007615572,0.0007233704,0.2640639,0.03097936],"study_design_scores_gemma":[0.000101663,0.0002082434,0.9428009,0.0002689878,0.000008531669,0.00005126793,0.001826358,0.00009103267,0.0003465386,0.000237627,0.0538285,0.0002303645],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9688374,0.001337658,0.000002073464,0.02382583,0.0001155284,0.0003227413,0.005537055,0.00001570499,0.000006053494],"genre_scores_gemma":[0.9839239,0.000195981,0.0003389888,0.01046202,0.0001196547,0.00005985921,0.004752546,0.000001768823,0.0001453395],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2627282,"threshold_uncertainty_score":0.1788836,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2071498054","doi":"10.1007/s00299-013-1469-3","title":"Overexpression of AtWRKY28 and AtWRKY75 in Arabidopsis enhances resistance to oxalic acid and Sclerotinia sclerotiorum","year":2013,"lang":"en","type":"article","venue":"Plant Cell Reports","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":195,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"University of Oklahoma Health Sciences Center; University of Saskatchewan","keywords":"Sclerotinia sclerotiorum; WRKY protein domain; Arabidopsis; Biology; Jasmonic acid; Botrytis cinerea; Salicylic acid; Biotic stress; Plant disease resistance; Jasmonate; Microbiology; Botany; Abiotic stress; Gene; Genetics; Mutant","authors":[{"name":"Xiaoting Chen","is_ca":false},{"name":"Jun Liu","is_ca":false},{"name":"Guifang Lin","is_ca":false},{"name":"Airong Wang","is_ca":false},{"name":"Zonghua Wang","is_ca":false},{"name":"Guodong Lu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01111290281094558,"gpt":0.1825861612799789,"spread":0.1714732584690333,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002542602,0.0001565407,0.0002702669,0.00002865647,0.00009561377,0.00004776047,0.00008159362,0.00009446067,0.0001068818],"category_scores_gemma":[0.00003235405,0.000066663,0.00003187821,0.0001752175,0.00004026364,0.0001205949,0.00008428401,0.00007870983,0.00000520765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009773998,"about_ca_system_score_gemma":0.00000524576,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002032035,"about_ca_topic_score_gemma":0.001231401,"domain_scores_codex":[0.9986463,0.00003936713,0.0003889396,0.0004217347,0.000219216,0.000284482],"domain_scores_gemma":[0.9994391,0.00007719114,0.0002167052,0.00008279666,0.00003694214,0.0001472888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002526061,0.00004632901,0.01105854,0.000034834,0.000002194671,0.00002858607,0.0000593044,8.479864e-7,0.9863516,0.00002257218,0.0004491936,0.00192073],"study_design_scores_gemma":[0.00008437343,0.0001014815,0.4420393,0.0004004413,0.000004990508,0.00003484058,0.0001618284,0.000009481386,0.5543101,0.0004600198,0.002185483,0.0002076483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976826,0.000495706,0.000002649464,0.0001966703,0.00007282901,0.0003818854,0.00006491185,0.00002020043,0.001082598],"genre_scores_gemma":[0.9985571,0.0003297945,0.0004049234,0.00006569862,0.00003551165,0.0000343069,0.00002703438,0.000001416375,0.0005442406],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4320415,"threshold_uncertainty_score":0.2718438,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4220859776","doi":"10.1126/science.abk0989","title":"Global urban environmental change drives adaptation in white clover","year":2022,"lang":"en","type":"article","venue":"Science","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":190,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary; University of New Brunswick; University of Manitoba; Laurentian University; Brock University; Concordia University; Saint Mary's University; University of Ottawa; Nipissing University; Université Laval; Mount Allison University; University of Alberta; Genome British Columbia; University of British Columbia; Université de Moncton; University of Toronto; MacEwan University; Queen's University","funders":"Natural Environment Research Council; Natural Sciences and Engineering Research Council of Canada; Agencia Nacional de Investigación y Desarrollo; Max-Planck-Gesellschaft; Université de Moncton; MacEwan University; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Sight Research UK; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Comisión Nacional de Investigación Científica y Tecnológica; University of Wisconsin-Madison; National Science Foundation; Compute Canada; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Urbanization; Adaptation (eye); Geography; Biology; Environmental change; Ecology; Abiotic component; Economic geography; Climate change","authors":[{"name":"James S. Santangelo","is_ca":true},{"name":"Rob W. Ness","is_ca":true},{"name":"Beata Cohan","is_ca":true},{"name":"Connor R. Fitzpatrick","is_ca":false},{"name":"Simon G. Innes","is_ca":true},{"name":"Sophie Koch","is_ca":true},{"name":"Lindsay S. Miles","is_ca":true},{"name":"Samreen Munim","is_ca":true},{"name":"Pedro R. Peres‐Neto","is_ca":true},{"name":"Cindy M. Prashad","is_ca":true},{"name":"Alex T. Tong","is_ca":true},{"name":"Windsor E. Aguirre","is_ca":false},{"name":"Philips Akinwole","is_ca":false},{"name":"Marina Alberti","is_ca":false},{"name":"Jackie Álvarez","is_ca":false},{"name":"Jill T. Anderson","is_ca":false},{"name":"Joseph Anderson","is_ca":false},{"name":"Yoshino Ando","is_ca":false},{"name":"Nigel R. Andrew","is_ca":false},{"name":"Fábio Angeoletto","is_ca":false},{"name":"Daniel N. Anstett","is_ca":true},{"name":"Julia Anstett","is_ca":true},{"name":"Felipe Aoki‐Gonçalves","is_ca":false},{"name":"A. Z. Andis Arietta","is_ca":false},{"name":"Mary T. K. Arroyo","is_ca":false},{"name":"Emily J. Austen","is_ca":true},{"name":"Fernanda Baena‐Díaz","is_ca":false},{"name":"Cory A. Barker","is_ca":true},{"name":"H.A. Baylis","is_ca":false},{"name":"Julia M. Beliz","is_ca":false},{"name":"Alfonso Benítez‐Mora","is_ca":false},{"name":"David Bickford","is_ca":false},{"name":"Gabriela Biedebach","is_ca":false},{"name":"Gwylim S. Blackburn","is_ca":true},{"name":"Mannfred M. A. Boehm","is_ca":true},{"name":"Stephen P. Bonser","is_ca":false},{"name":"Dries Bonte","is_ca":false},{"name":"Jesse R. Bragger","is_ca":false},{"name":"Cristina Branquinho","is_ca":false},{"name":"Kristien I. Brans","is_ca":false},{"name":"Jorge C. Bresciano","is_ca":false},{"name":"Peta Brom","is_ca":false},{"name":"Anna Bucharová","is_ca":false},{"name":"Briana Burt","is_ca":false},{"name":"James F. Cahill","is_ca":true},{"name":"Katelyn D. Campbell","is_ca":true},{"name":"Elizabeth J. Carlen","is_ca":false},{"name":"Diego Carmona","is_ca":false},{"name":"María Clara Castellanos","is_ca":false},{"name":"Giada Centenaro","is_ca":false},{"name":"Izan Chalen","is_ca":false},{"name":"Jaime A. Chaves","is_ca":false},{"name":"Mariana Chávez‐Pesqueira","is_ca":false},{"name":"Xiaoyong Chen","is_ca":false},{"name":"Angela M. Chilton","is_ca":false},{"name":"Kristina M. Chomiak","is_ca":false},{"name":"Diego F. Cisneros‐Heredia","is_ca":false},{"name":"Ibrahim Cisse","is_ca":false},{"name":"Aimée T. Classen","is_ca":false},{"name":"Mattheau S. Comerford","is_ca":false},{"name":"Camila Cordoba Fradinger","is_ca":false},{"name":"Hannah B. Corney","is_ca":true},{"name":"Andrew J. Crawford","is_ca":false},{"name":"Kerri M. Crawford","is_ca":false},{"name":"Maxime Dahirel","is_ca":false},{"name":"Santiago David","is_ca":true},{"name":"Robert De Haan","is_ca":false},{"name":"Nicholas J. Deacon","is_ca":false},{"name":"Clare Dean","is_ca":false},{"name":"Ek del‐Val","is_ca":false},{"name":"Eleftherios K. Deligiannis","is_ca":false},{"name":"Derek Denney","is_ca":false},{"name":"Margarete A Dettlaff","is_ca":true},{"name":"Michelle F. DiLeo","is_ca":false},{"name":"Yuanyuan Ding","is_ca":false},{"name":"Moisés E. Domínguez-López","is_ca":false},{"name":"Davide M. Dominoni","is_ca":false},{"name":"Savannah L. Draud","is_ca":false},{"name":"Karen Dyson","is_ca":false},{"name":"Jacintha Ellers","is_ca":false},{"name":"Carlos Iván Espinosa","is_ca":false},{"name":"Liliana Essi","is_ca":false},{"name":"Mohsen Falahati‐Anbaran","is_ca":false},{"name":"Jéssica C. de Faria Falcão","is_ca":false},{"name":"Hayden T. Fargo","is_ca":true},{"name":"Mark D. E. Fellowes","is_ca":false},{"name":"Raina Fitzpatrick","is_ca":false},{"name":"Leah Flaherty","is_ca":true},{"name":"Pádraic J. Flood","is_ca":false},{"name":"María Francisca Flores","is_ca":false},{"name":"Juan Fornoni","is_ca":false},{"name":"Amy G. Foster","is_ca":false},{"name":"Christopher J. Frost","is_ca":false},{"name":"Tracy L. Fuentes","is_ca":false},{"name":"Justin R. Fulkerson","is_ca":false},{"name":"Edeline Gagnon","is_ca":true},{"name":"Frauke Garbsch","is_ca":false},{"name":"Colin J. Garroway","is_ca":true},{"name":"Aleeza C. Gerstein","is_ca":true},{"name":"Mischa M. Giasson","is_ca":true},{"name":"E. Binney Girdler","is_ca":false},{"name":"Spyros Gkelis","is_ca":false},{"name":"William Godsoe","is_ca":false},{"name":"Anneke Golemiec","is_ca":true},{"name":"Mireille Golemiec","is_ca":true},{"name":"César González‐Lagos","is_ca":false},{"name":"Amanda J. Gorton","is_ca":false},{"name":"Kiyoko M. Gotanda","is_ca":true},{"name":"Gustaf Granath","is_ca":false},{"name":"Stephan Greiner","is_ca":false},{"name":"Joanna S. Griffiths","is_ca":false},{"name":"Filipa Grilo","is_ca":false},{"name":"Pedro E. Gundel","is_ca":false},{"name":"Benjamin Hamilton","is_ca":false},{"name":"Joyce M. Hardin","is_ca":false},{"name":"Tianhua He","is_ca":false},{"name":"Stephen B. Heard","is_ca":true},{"name":"André Henriques","is_ca":false},{"name":"Melissa Hernández-Poveda","is_ca":false},{"name":"Molly C. Hetherington-Rauth","is_ca":true},{"name":"Sarah J. Hill","is_ca":false},{"name":"Dieter F. Hochuli","is_ca":false},{"name":"Kathryn A. Hodgins","is_ca":false},{"name":"Glen R. Hood","is_ca":false},{"name":"Gareth R. Hopkins","is_ca":false},{"name":"Katherine A. Hovanes","is_ca":false},{"name":"Ava R. Howard","is_ca":false},{"name":"Sierra C. Hubbard","is_ca":false},{"name":"Carlos N. Ibarra‐Cerdeña","is_ca":false},{"name":"Carlos Iñiguez‐Armijos","is_ca":false},{"name":"Paola Jara‐Arancio","is_ca":false},{"name":"Benjamin J. M. Jarrett","is_ca":false},{"name":"Manon Jeannot","is_ca":false},{"name":"Vania Jiménez-Lobato","is_ca":false},{"name":"Mae Johnson","is_ca":true},{"name":"Oscar W. Johnson","is_ca":false},{"name":"Philip P. Johnson","is_ca":false},{"name":"Reagan A. Johnson","is_ca":false},{"name":"Matthew P. Josephson","is_ca":true},{"name":"Meen Chel Jung","is_ca":false},{"name":"Michael G. Just","is_ca":false},{"name":"Aapo Kahilainen","is_ca":false},{"name":"Otto S. Kailing","is_ca":false},{"name":"Eunice Kariñho‐Betancourt","is_ca":false},{"name":"Regina Karousou","is_ca":false},{"name":"Lauren A. Kirn","is_ca":false},{"name":"Anna Kirschbaum","is_ca":false},{"name":"Anna‐Liisa Laine","is_ca":false},{"name":"Jalene M. LaMontagne","is_ca":false},{"name":"Christian Lampei","is_ca":false},{"name":"Carlos Lara","is_ca":false},{"name":"Erica L. Larson","is_ca":false},{"name":"Adrián Lázaro‐Lobo","is_ca":false},{"name":"Jennifer H. Le","is_ca":false},{"name":"Deleon S. Leandro","is_ca":false},{"name":"Chris Lee","is_ca":false},{"name":"Yunting Lei","is_ca":false},{"name":"Carolina A. León","is_ca":false},{"name":"Manuel E. Lequerica Támara","is_ca":false},{"name":"Danica C. Levesque","is_ca":true},{"name":"Wan‐Jin Liao","is_ca":false},{"name":"Megan K. Ljubotina","is_ca":true},{"name":"Hannah Locke","is_ca":false},{"name":"Martin T. Lockett","is_ca":false},{"name":"Tiffany C Longo","is_ca":false},{"name":"Jeremy Lundholm","is_ca":true},{"name":"Thomas MacGillavry","is_ca":false},{"name":"Christopher R. Mackin","is_ca":false},{"name":"Alex R. Mahmoud","is_ca":false},{"name":"Isaac A. Manju","is_ca":false},{"name":"Janine Mariën","is_ca":false},{"name":"D. Nayeli Martínez","is_ca":false},{"name":"Marina Martínez-Bartolomé","is_ca":false},{"name":"Emily K. Meineke","is_ca":false},{"name":"Wendy Mendoza-Arroyo","is_ca":false},{"name":"Thomas Merritt","is_ca":true},{"name":"Lila Elizabeth L. Merritt","is_ca":true},{"name":"Giuditta Migiani","is_ca":false},{"name":"Emily S. Minor","is_ca":false},{"name":"Nora Mitchell","is_ca":false},{"name":"Mitra Mohammadi Bazargani","is_ca":false},{"name":"Angela T. Moles","is_ca":false},{"name":"Julia D. Monk","is_ca":false},{"name":"Christopher M. Moore","is_ca":false},{"name":"Paula Andrea Morales-Morales","is_ca":false},{"name":"Brook T. Moyers","is_ca":false},{"name":"Miriam Muñoz‐Rojas","is_ca":false},{"name":"Jason Munshi‐South","is_ca":false},{"name":"Shannon M. Murphy","is_ca":false},{"name":"Maureen Murúa","is_ca":false},{"name":"Melisa Neila","is_ca":false},{"name":"Ourania Nikolaidis","is_ca":false},{"name":"Iva Njunjić","is_ca":false},{"name":"Peter Nosko","is_ca":true},{"name":"Juan Núñez‐Farfán","is_ca":false},{"name":"Takayuki Ohgushi","is_ca":false},{"name":"Kenneth M. Olsen","is_ca":false},{"name":"Øystein H. Opedal","is_ca":false},{"name":"Cristina Ornelas","is_ca":false},{"name":"Amy L. Parachnowitsch","is_ca":true},{"name":"Aaron S. Paratore","is_ca":false},{"name":"Ángela M. Parody-Merino","is_ca":false},{"name":"Juraj Paule","is_ca":false},{"name":"Octávio S. Paulo","is_ca":false},{"name":"João Carlos Pena","is_ca":false},{"name":"Vera Pfeiffer","is_ca":false},{"name":"Pedro Pinho","is_ca":false},{"name":"Anthony Piot","is_ca":true},{"name":"Ilga Porth","is_ca":true},{"name":"Nicholas D. Poulos","is_ca":false},{"name":"Adriana Puentes","is_ca":false},{"name":"Jiao Qu","is_ca":false},{"name":"Estela Quintero‐Vallejo","is_ca":false},{"name":"Steve M. Raciti","is_ca":false},{"name":"Joost A. M. Raeymaekers","is_ca":false},{"name":"Krista Raveala","is_ca":false},{"name":"Diana J. Rennison","is_ca":false},{"name":"Milton Cézar Ribeiro","is_ca":false},{"name":"Jonathan Richardson","is_ca":false},{"name":"Gonzalo Rivas‐Torres","is_ca":false},{"name":"Benjamin J. Rivera","is_ca":false},{"name":"Adam B. Roddy","is_ca":false},{"name":"Erika Rodríguez-Muñoz","is_ca":false},{"name":"Raúl Román","is_ca":false},{"name":"Laura S. Rossi","is_ca":true},{"name":"Jennifer K. Rowntree","is_ca":false},{"name":"Travis J. Ryan","is_ca":false},{"name":"Santiago Salinas","is_ca":false},{"name":"Nathan J. Sanders","is_ca":false},{"name":"Luis Y. Santiago‐Rosario","is_ca":false},{"name":"Amy M. Savage","is_ca":false},{"name":"J. F. Scheepens","is_ca":false},{"name":"Menno Schilthuizen","is_ca":false},{"name":"Adam C. Schneider","is_ca":true},{"name":"Tiffany Scholier","is_ca":false},{"name":"Jared L. Scott","is_ca":false},{"name":"Summer A. Shaheed","is_ca":false},{"name":"Richard P. Shefferson","is_ca":false},{"name":"Caralee A. Shepard","is_ca":false},{"name":"Jacqui A. Shykoff","is_ca":false},{"name":"Georgianna Silveira","is_ca":false},{"name":"Alexis D. Smith","is_ca":false},{"name":"Lizet Solis-Gabriel","is_ca":false},{"name":"Antonella Soro","is_ca":false},{"name":"Katie V. Spellman","is_ca":false},{"name":"Kaitlin Stack Whitney","is_ca":false},{"name":"Indra Starke-Ottich","is_ca":false},{"name":"Jörg G. Stephan","is_ca":false},{"name":"Jessica D. Stephens","is_ca":false},{"name":"Justyna Szulc","is_ca":false},{"name":"Marta Szulkin","is_ca":false},{"name":"Ayco J. M. Tack","is_ca":false},{"name":"Ítalo Tamburrino","is_ca":false},{"name":"Tayler D. Tate","is_ca":false},{"name":"Emmanuel Tergemina","is_ca":false},{"name":"Panagiotis Theodorou","is_ca":false},{"name":"Ken Thompson","is_ca":true},{"name":"Caragh G. Threlfall","is_ca":false},{"name":"Robin M. Tinghitella","is_ca":false},{"name":"Lilibeth Toledo‐Chelala","is_ca":false},{"name":"Xin Tong","is_ca":false},{"name":"Léa Uroy","is_ca":false},{"name":"Shunsuke Utsumi","is_ca":false},{"name":"Martijn L. Vandegehuchte","is_ca":false},{"name":"Acer VanWallendael","is_ca":false},{"name":"Paula M. Vidal","is_ca":false},{"name":"Susana M. Wadgymar","is_ca":false},{"name":"Aiying Wang","is_ca":false},{"name":"Nian Wang","is_ca":false},{"name":"Montana L. Warbrick","is_ca":true},{"name":"Kenneth D. Whitney","is_ca":false},{"name":"Miriam Wiesmeier","is_ca":false},{"name":"J. Tristian Wiles","is_ca":false},{"name":"Jianqiang Wu","is_ca":false},{"name":"Zoe A. Xirocostas","is_ca":false},{"name":"Zhaogui Yan","is_ca":false},{"name":"Jiahe Yao","is_ca":false},{"name":"Jeremy B. Yoder","is_ca":false},{"name":"Owen Yoshida","is_ca":true},{"name":"Jingxiong Zhang","is_ca":false},{"name":"Zhigang Zhao","is_ca":false},{"name":"Carly D. Ziter","is_ca":true},{"name":"Matthew P. Zuellig","is_ca":false},{"name":"Rebecca A. Zufall","is_ca":false},{"name":"Juan E. Zurita","is_ca":false},{"name":"Sharon E. Zytynska","is_ca":false},{"name":"Marc T. J. Johnson","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01930233326094162,"gpt":0.1930736084534243,"spread":0.1737712751924826,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002582452,0.00005440415,0.00005205654,0.00001126191,0.0003490555,0.00002735069,0.0002722411,0.00001242608,0.0003721829],"category_scores_gemma":[0.000004346492,0.00002300473,0.00002131472,0.0005546106,0.00008855155,0.0001625508,0.0001384584,0.00004330014,0.00001119658],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001121314,"about_ca_system_score_gemma":0.00000764721,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003172627,"about_ca_topic_score_gemma":0.000528524,"domain_scores_codex":[0.9990808,0.00003055747,0.00007365263,0.0002442178,0.0003520456,0.0002186735],"domain_scores_gemma":[0.9998763,0.000008338349,0.00003421967,0.00002972312,0.00000304859,0.00004838511],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002020426,0.0001123427,0.2046373,8.988064e-7,7.366642e-7,0.000028167,0.0006186137,0.0001320348,0.763625,0.000979752,0.00008283689,0.02976202],"study_design_scores_gemma":[0.00005972264,0.0001144539,0.9862215,0.000002560967,9.843424e-7,0.000009614072,0.001918124,0.001483447,0.0003275036,0.0003461929,0.009411586,0.0001043277],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985265,0.0001468332,0.000004450402,0.0002515677,0.0001886745,0.0001079314,0.0002169076,0.00001363073,0.0005434898],"genre_scores_gemma":[0.9994556,0.00001436148,0.00006558208,0.0002008326,0.00004964008,0.00002302839,0.00001969382,1.771992e-7,0.0001710413],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7815841,"threshold_uncertainty_score":0.4075142,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2105584985","doi":"10.1111/j.1469-8137.2011.03732.x","title":"Putting plant resistance traits on the map: a test of the idea that plants are better defended at lower latitudes","year":2011,"lang":"en","type":"article","venue":"New Phytologist","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":183,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Consejo Nacional de Investigaciones Científicas y Técnicas; Victoria University; Claude Leon Foundation; University of New South Wales; Victoria University of Wellington; Amazon Conservation Association; Consejo Nacional de Ciencia y Tecnología; National Science Foundation","keywords":"Latitude; Resistance (ecology); Biology; Test (biology); Drought resistance; Botany; Ecology; Geography","authors":[{"name":"Angela T. Moles","is_ca":false},{"name":"Ian R. Wallis","is_ca":false},{"name":"William J. Foley","is_ca":false},{"name":"David I. Warton","is_ca":false},{"name":"James Stegen","is_ca":false},{"name":"Alejandro J. Bisigato","is_ca":false},{"name":"Lucrecia Cella‐Pizarro","is_ca":false},{"name":"Connie J. Clark","is_ca":false},{"name":"Philippe S. Cohen","is_ca":false},{"name":"William K. Cornwell","is_ca":true},{"name":"Will Edwards","is_ca":false},{"name":"Rasmus Ejrnæs","is_ca":false},{"name":"Therany Gonzales‐Ojeda","is_ca":false},{"name":"Bente J. Graae","is_ca":false},{"name":"Gregory Hay","is_ca":false},{"name":"Fainess C. Lumbwe","is_ca":false},{"name":"Benjamín Magaña‐Rodríguez","is_ca":false},{"name":"Ben D. Moore","is_ca":false},{"name":"Pablo L. Peri","is_ca":false},{"name":"John R. Poulsen","is_ca":false},{"name":"Ruan Veldtman","is_ca":false},{"name":"Hugo von Zeipel","is_ca":false},{"name":"Nigel R. Andrew","is_ca":false},{"name":"Sarah Boulter","is_ca":false},{"name":"Elizabeth T. Borer","is_ca":false},{"name":"Florencia Fernández Campón","is_ca":false},{"name":"Moshe Coll","is_ca":false},{"name":"Alejandro G. Farji‐Brener","is_ca":false},{"name":"Jane De Gabriel","is_ca":false},{"name":"Enrique Jurado","is_ca":false},{"name":"Line Anker Kyhn","is_ca":false},{"name":"Bill Low","is_ca":false},{"name":"Christa P. H. Mulder","is_ca":false},{"name":"Kathryn Reardon‐Smith","is_ca":false},{"name":"Jorge Rodríguez‐Velázquez","is_ca":false},{"name":"Eric W. Seabloom","is_ca":false},{"name":"Peter A. Vesk","is_ca":false},{"name":"A. Van Cauter","is_ca":false},{"name":"Matthew Waldram","is_ca":false},{"name":"Zheng Zheng","is_ca":false},{"name":"Pedro G. Blendinger","is_ca":false},{"name":"Brian J. Enquist","is_ca":false},{"name":"José M. Facelli","is_ca":false},{"name":"Tiffany M. Knight","is_ca":false},{"name":"Jonathan Majer","is_ca":false},{"name":"Miguel Martı́nez-Ramos","is_ca":false},{"name":"PB McQuillan","is_ca":false},{"name":"Lynda D. Prior","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05539297092260439,"gpt":0.2021203235586198,"spread":0.1467273526360154,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001775074,0.0001841443,0.0002171801,0.000006682394,0.0003528667,0.00002356182,0.0005493962,0.0001101269,0.0002121033],"category_scores_gemma":[0.00006934631,0.00004784151,0.000133325,0.0001137547,0.0001433962,0.00003444992,0.0001011138,0.0001524628,0.00002640444],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002133559,"about_ca_system_score_gemma":0.000008361032,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006212002,"about_ca_topic_score_gemma":0.01154045,"domain_scores_codex":[0.9988292,0.00008007985,0.0002023226,0.0002983014,0.0002744247,0.0003156423],"domain_scores_gemma":[0.9991046,0.0004179486,0.0002765541,0.0001239377,0.00002002165,0.00005699497],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005749227,0.0003692477,0.1444223,0.00004376729,0.00006632411,0.0001480502,0.0003502759,0.000002493571,0.80393,0.004371291,0.04064475,0.005076564],"study_design_scores_gemma":[0.000153882,0.0001199408,0.8569068,0.0002416585,0.00001661968,0.00001620297,0.0001825183,0.000003019055,0.1265391,0.003898132,0.01172582,0.0001963145],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9904698,0.0002009209,0.000003896849,0.002763161,0.0002465671,0.0002539543,0.0007609461,0.00004217305,0.005258598],"genre_scores_gemma":[0.9973124,0.00002301537,0.0001981439,0.0007842244,0.0001177845,0.00001085303,0.00001287539,0.000001679003,0.001539065],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7124845,"threshold_uncertainty_score":0.6439845,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1998419384","doi":"10.1016/j.phytochem.2004.12.032","title":"Metabolism and detoxification of phytoalexins and analogs by phytopathogenic fungi","year":2005,"lang":"en","type":"review","venue":"Phytochemistry","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":179,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Phytoalexin; Detoxification (alternative medicine); Pathogenicity; Virulence; Biology; Metabolism; Microbiology; Botany; Biochemistry; Medicine; Gene","authors":[{"name":"M. Soledade C. Pedras","is_ca":true},{"name":"Pearson W. K. Ahiahonu","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02389491726018566,"gpt":0.2496121886083033,"spread":0.2257172713481176,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001394303,0.000326557,0.0009151592,0.00001169245,0.00008554735,0.00002962131,0.0001981403,0.0003069947,0.00004967461],"category_scores_gemma":[0.00001483415,0.0001346642,0.0001936538,0.0001948176,0.00008198841,0.00004535227,0.00006911237,0.0001806668,0.000002988659],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001438288,"about_ca_system_score_gemma":0.0000149474,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003271371,"about_ca_topic_score_gemma":0.00001183607,"domain_scores_codex":[0.998689,0.00004350562,0.0003879013,0.000486219,0.0001576255,0.0002357261],"domain_scores_gemma":[0.9992884,0.00009135894,0.0003652621,0.0001013421,0.0000339,0.0001196951],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000002672152,0.00002908479,0.000003101435,0.001450848,0.00002489832,0.000001356895,0.000002984996,1.183903e-8,0.2752051,0.00001533364,0.0001407095,0.7231238],"study_design_scores_gemma":[0.00006494244,0.00002032472,0.0001099595,0.001051301,0.0003143847,0.00006024165,0.00001687336,0.000002171379,0.007092532,0.00005743292,0.990858,0.0003518913],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.005717662,0.9919363,0.000002665738,0.00001367653,0.00003772758,0.0002346836,0.001768615,0.00002485744,0.0002638186],"genre_scores_gemma":[0.004500599,0.9941563,0.00009652539,0.00001346448,0.0003053289,0.00004772394,0.0005618352,0.000003017029,0.0003152221],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9907172,"threshold_uncertainty_score":0.5491445,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2599983077","doi":"10.1186/s12864-017-3642-5","title":"Changes in the Sclerotinia sclerotiorum transcriptome during infection of Brassica napus","year":2017,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":175,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Government of Canada; Saskatchewan Canola Development Commission","keywords":"Sclerotinia sclerotiorum; Biology; Transcriptome; Virulence; Gene; Host (biology); Genetics; Brassica; Sclerotinia; Gene expression profiling; Secondary metabolism; Gene expression; Microbiology; Botany","authors":[{"name":"Shirin Seifbarghi","is_ca":true},{"name":"M. Hossein Borhan","is_ca":true},{"name":"Yangdou Wei","is_ca":true},{"name":"Cathy Coutu","is_ca":true},{"name":"Stephen J. Robinson","is_ca":true},{"name":"Dwayne D. Hegedus","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03897467293360019,"gpt":0.2202491102938914,"spread":0.1812744373602912,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002443669,0.00008139738,0.0001184706,0.00001120283,0.0003517575,0.00006912,0.000315172,0.00006345776,0.00002386271],"category_scores_gemma":[0.00001658604,0.00002853842,0.00005830966,0.00005796676,0.00004558685,0.00005608656,0.0000326609,0.00007181534,0.000005494515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001507166,"about_ca_system_score_gemma":0.000005192655,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002138551,"about_ca_topic_score_gemma":0.04520247,"domain_scores_codex":[0.9994122,0.00003817358,0.0001241085,0.000144965,0.0001006446,0.0001798971],"domain_scores_gemma":[0.9997047,0.00002721497,0.0001279502,0.00009987249,0.00001593683,0.00002428667],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001891011,0.00003223231,0.03558575,0.0000121186,0.000002192229,0.00000145378,0.0001004065,0.000006653743,0.9619119,0.0001356069,0.000007156337,0.002185677],"study_design_scores_gemma":[0.0001350146,0.00005759287,0.9505939,0.00002609015,0.000005054179,0.000004857951,0.0001188245,0.0000208986,0.04786248,0.0001358523,0.0009607215,0.00007865545],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987651,0.00003756373,0.000005815374,0.0004850933,0.0001609869,0.0001901078,0.00004865411,0.00001131605,0.0002953981],"genre_scores_gemma":[0.9995016,0.0001635521,0.00006648508,0.00003205985,0.0001421448,0.00001262179,0.000007421315,7.620841e-7,0.00007330004],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9150082,"threshold_uncertainty_score":0.9722201,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2032208823","doi":"10.1007/s00425-008-0740-2","title":"Expressing a gene encoding wheat oxalate oxidase enhances resistance to Sclerotinia sclerotiorum in oilseed rape (Brassica napus)","year":2008,"lang":"en","type":"article","venue":"Planta","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":170,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministry of Agriculture","funders":"Huazhong University of Science and Technology; National Natural Science Foundation of China","keywords":"Sclerotinia sclerotiorum; Sclerotinia; Brassica; Biology; Genetically modified crops; Leptosphaeria maculans; Plant disease resistance; Inoculation; Rapeseed; Transgene; Pathogen; Horticulture; Botany; Agronomy; Gene; Microbiology; Biochemistry","authors":[{"name":"Xiangbai Dong","is_ca":true},{"name":"Ruiqin Ji","is_ca":false},{"name":"Xuelan Guo","is_ca":false},{"name":"Simon J. Foster","is_ca":false},{"name":"Hong Chen","is_ca":false},{"name":"Caihua Dong","is_ca":false},{"name":"Yueying Liu","is_ca":false},{"name":"Qiong Hu","is_ca":false},{"name":"Shengyi Liu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02878762019018305,"gpt":0.2096162237868316,"spread":0.1808286035966485,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002879197,0.0002603152,0.0003597449,0.00005400532,0.0005172561,0.00008282737,0.0003899819,0.0001260457,0.00012614],"category_scores_gemma":[0.00004464606,0.0001193338,0.00008929785,0.0005171217,0.00005629006,0.0001989129,0.0000982682,0.0001798893,0.00007788942],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004651214,"about_ca_system_score_gemma":0.00001699256,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007594638,"about_ca_topic_score_gemma":0.003054671,"domain_scores_codex":[0.9979253,0.00009222974,0.0003896924,0.0005855109,0.0003481749,0.000659046],"domain_scores_gemma":[0.9993575,0.0001519288,0.0001216667,0.0001115501,0.00003655735,0.0002207993],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001474497,0.0000672984,0.002247071,0.00001123371,0.000005632168,0.0002035709,0.0001780504,0.00001019902,0.9951791,0.00004452803,0.0006281245,0.001277733],"study_design_scores_gemma":[0.0004310911,0.0001204484,0.1244454,0.0006369323,0.000009594074,0.00008269326,0.0002324961,0.0000619612,0.8651895,0.0001166603,0.008064366,0.000608816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963782,0.0003471525,0.00002918375,0.0006841947,0.0002129073,0.0002965535,0.0001927974,0.0001017839,0.00175721],"genre_scores_gemma":[0.9967046,0.0003998433,0.001129706,0.0003303637,0.0002166865,0.00004378122,0.00006324806,0.000003051779,0.001108748],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1299896,"threshold_uncertainty_score":0.4866291,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2089350473","doi":"10.1046/j.1439-0523.2000.00514.x","title":"Marker‐assisted selection of common beans for resistance to common bacterial blight: efficacy and economics","year":2000,"lang":"en","type":"article","venue":"Plant Breeding","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":156,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"RAPD; Biology; Genetic marker; Population; Genetics; Marker-assisted selection; Quantitative trait locus; Locus (genetics); Molecular marker; Genetic diversity; Gene","authors":[{"name":"Kangfu Yu","is_ca":true},{"name":"S. J. Park","is_ca":true},{"name":"Vaino Poysa","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02398692988670924,"gpt":0.2061192202568085,"spread":0.1821322903700993,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001841169,0.0001121825,0.0002291724,0.00001620143,0.0001971434,0.00004721628,0.000111084,0.00007670046,0.00009287807],"category_scores_gemma":[0.000009477873,0.00005306958,0.00004336424,0.0001087538,0.00001706523,0.00006063582,0.00001725363,0.00004505958,0.000002309321],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002003453,"about_ca_system_score_gemma":0.000003237633,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003559963,"about_ca_topic_score_gemma":0.004846177,"domain_scores_codex":[0.999264,0.00002356988,0.0002252223,0.0002199952,0.00006042964,0.0002067622],"domain_scores_gemma":[0.9996194,0.0001800293,0.0000786145,0.00002924162,0.00001842216,0.00007427846],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000823994,0.00004823451,0.0008944396,0.00001784574,0.00001285891,0.000001281664,0.00003201424,0.000005120356,0.9773815,0.0003447591,0.0006095629,0.01982841],"study_design_scores_gemma":[0.001727715,0.001649441,0.4319777,0.000518965,0.0001192285,0.0001132286,0.0001826015,0.001294297,0.2365877,0.000603098,0.3242241,0.00100204],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973301,0.00002622787,0.000005949599,0.0003014257,0.0001160222,0.0002649593,0.001098403,0.00002978801,0.0008271419],"genre_scores_gemma":[0.9985077,0.00008173579,0.000455734,0.00005155829,0.0001954051,0.00001236081,0.0002165546,0.000001466791,0.0004774422],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7407938,"threshold_uncertainty_score":0.2704281,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1980950529","doi":"10.1080/15216540211474","title":"Oxalate, Germins, and Higher‐Plant Pathogens","year":2002,"lang":"en","type":"review","venue":"IUBMB Life","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":154,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Oxalate; Hydrogen peroxide; Cell wall; Proteases; Chemistry; Biochemistry; Biology; Botany; Microbiology; Enzyme","authors":[{"name":"B. G. Lane","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06339168630787766,"gpt":0.241110859839887,"spread":0.1777191735320093,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001659271,0.0004337623,0.001134338,0.0000226775,0.0002094635,0.00009710246,0.000297614,0.0004584214,0.0005798611],"category_scores_gemma":[0.00001944128,0.0001354957,0.0003117028,0.0002552501,0.00004310541,0.00004539679,0.0001075385,0.0002571501,0.0001896374],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002376917,"about_ca_system_score_gemma":0.00001607315,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001270744,"about_ca_topic_score_gemma":0.00006932494,"domain_scores_codex":[0.9982126,0.0001251246,0.0004357831,0.0005593323,0.0002308371,0.0004362738],"domain_scores_gemma":[0.9991438,0.0001930093,0.0002485467,0.00009851755,0.00001897146,0.0002970939],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000001881337,0.00003664287,0.000003364272,0.0008355898,0.00004018506,0.000168902,0.000004039399,1.10292e-8,0.000325948,0.0003509933,0.003638947,0.9945935],"study_design_scores_gemma":[0.00003720736,0.00005690359,0.000117651,0.001448008,0.0001726046,0.000119325,0.000005802142,0.000001116427,0.000001393044,0.0000354456,0.9975929,0.0004116503],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002935708,0.994269,2.623052e-7,0.00005718532,0.0004251501,0.0003519664,0.002946268,0.00009290325,0.001563746],"genre_scores_gemma":[0.00005752191,0.9948324,0.00003594969,0.0001411929,0.0007597849,0.00004367745,0.0005604118,0.00000378267,0.003565284],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9941819,"threshold_uncertainty_score":0.6349072,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1983779735","doi":"10.3835/plantgenome2013.10.0030","title":"Genome Wide Association Mapping of <i>Sclerotinia sclerotiorum</i> Resistance in Soybean with a Genotyping‐by‐Sequencing Approach","year":2014,"lang":"en","type":"article","venue":"The Plant Genome","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":150,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Sclerotinia sclerotiorum; Sclerotinia; Linkage disequilibrium; Genetics; Genotyping; Association mapping; Single-nucleotide polymorphism; Population; Genetic association; Allele; Marker-assisted selection; Plant disease resistance; Genetic marker; Genotype; Gene; Horticulture","authors":[{"name":"Maxime Bastien","is_ca":true},{"name":"Humira Sonah","is_ca":true},{"name":"François Belzile","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01827149398459147,"gpt":0.1625709361690306,"spread":0.1442994421844391,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001175163,0.0001823817,0.0003059113,0.00002491125,0.0002272603,0.00004228092,0.000392548,0.0001005048,0.00001881389],"category_scores_gemma":[0.0000478443,0.00006699948,0.00005704081,0.0003970684,0.0000422822,0.00006850087,0.00005002292,0.0001849708,0.000008843312],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001362924,"about_ca_system_score_gemma":0.00001435249,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008592022,"about_ca_topic_score_gemma":0.001508932,"domain_scores_codex":[0.9983926,0.0001570876,0.0003365063,0.000325537,0.0003329339,0.0004552789],"domain_scores_gemma":[0.9991952,0.0002479237,0.000337178,0.0001104695,0.0000473747,0.00006189677],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005640392,0.00003446577,0.005850925,0.00002499724,0.00001558385,0.000002056281,0.0003681349,0.00008929821,0.9931336,0.0003034839,0.00003855451,0.00008250923],"study_design_scores_gemma":[0.0008412942,0.0002912807,0.9639356,0.0003191258,0.0000535431,0.00001845812,0.001751092,0.0003845661,0.009256236,0.001527071,0.02070918,0.0009125277],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949375,0.0003112722,0.0003563849,0.0005075294,0.00003300476,0.0003649458,0.0003256612,0.00004090531,0.003122749],"genre_scores_gemma":[0.9982198,0.00007169547,0.0006761116,0.0002455632,0.00009142886,0.00002477872,0.0002169283,0.00000290415,0.0004507793],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9838774,"threshold_uncertainty_score":0.273216,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2029097104","doi":"10.1016/j.fcr.2004.07.014","title":"From genome to crop: integration through simulation modeling","year":2004,"lang":"en","type":"article","venue":"Field Crops Research","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":144,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"McMaster University","keywords":"Cultivar; Crop; Cropping; Crop simulation model; Crop yield; Crop management; Biology; Phaseolus; Biotechnology; Function (biology); Yield (engineering); Agronomy; Ecology; Agriculture; Genetics","authors":[{"name":"Gerrit Hoogenboom","is_ca":false},{"name":"Jeffrey W. White","is_ca":false},{"name":"Carlos D. Messina","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1307056538159046,"gpt":0.3513295189789652,"spread":0.2206238651630606,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002321576,0.00007056577,0.00008492166,0.00001520858,0.000293496,0.0001076959,0.0002056392,0.0001039561,0.0003817348],"category_scores_gemma":[0.0001076869,0.00002746251,0.00003907699,0.0003042051,0.00001067367,0.0001005599,0.00007183467,0.0001968336,0.0001467068],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004388618,"about_ca_system_score_gemma":0.00001043894,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003443331,"about_ca_topic_score_gemma":0.003200879,"domain_scores_codex":[0.9989598,0.00005146629,0.0001270772,0.0002535152,0.0003369891,0.000271118],"domain_scores_gemma":[0.9995611,0.0001513594,0.0000135156,0.0000644335,0.0001388598,0.00007075749],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000483722,0.00002765493,0.00001165715,0.00000138106,0.000002902005,0.000009895281,0.0003710686,0.02967323,0.9592292,0.000699538,0.00004047536,0.009884679],"study_design_scores_gemma":[0.001112673,0.003210936,0.01030065,0.0004650611,0.00002168279,0.000008651205,0.008021931,0.1160565,0.547044,0.2578062,0.05443479,0.001516943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.969175,0.00007069928,0.02676925,0.002466816,0.00007472475,0.0001860737,0.00005431963,0.00003339203,0.001169729],"genre_scores_gemma":[0.9976869,0.00002698276,0.001245517,0.0002326034,0.0004254655,0.0000134609,0.00008186926,8.076279e-7,0.0002863755],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4121852,"threshold_uncertainty_score":0.5205309,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2054284158","doi":"10.1094/mpmi-22-3-0235","title":"Overexpression of <i>Brassica napus MPK4</i> Enhances Resistance to <i>Sclerotinia sclerotiorum</i> in Oilseed Rape","year":2009,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":142,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Sclerotinia sclerotiorum; Biology; Botrytis cinerea; Brassica; Jasmonic acid; Arabidopsis thaliana; Genetically modified crops; Arabidopsis; Plant disease resistance; Transgene; Plant defense against herbivory; Botany; Salicylic acid; Mutant; Genetics; Gene","authors":[{"name":"Zheng Wang","is_ca":true},{"name":"Han Mao","is_ca":false},{"name":"Caihua Dong","is_ca":false},{"name":"Ruiqin Ji","is_ca":false},{"name":"Li Cai","is_ca":false},{"name":"Hao Fu","is_ca":false},{"name":"Shengyi Liu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009279185900430694,"gpt":0.2139531788030685,"spread":0.2046739929026378,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001499289,0.0002345531,0.0003222434,0.00006933655,0.0001516377,0.00005941058,0.0003505732,0.0001063447,0.0001417916],"category_scores_gemma":[0.00004132534,0.0001194663,0.000146269,0.0005320014,0.00002850834,0.000155572,0.00005718326,0.0002272407,0.000036471],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004451586,"about_ca_system_score_gemma":0.00001423641,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004942566,"about_ca_topic_score_gemma":0.001821816,"domain_scores_codex":[0.9983476,0.00009353705,0.0004582118,0.0004520974,0.0002423574,0.0004061344],"domain_scores_gemma":[0.9993615,0.0001023895,0.0001936494,0.000136614,0.00007079035,0.000135103],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001739312,0.0002205191,0.00007131926,0.000009432145,0.000008883614,0.00003390724,0.00006123901,0.00003279697,0.9953002,0.0002585316,0.002221933,0.001607246],"study_design_scores_gemma":[0.0002078291,0.0001573173,0.009195114,0.0006659892,0.00001001772,0.00002193044,0.0001106773,0.0000127992,0.9676529,0.0002026348,0.02149549,0.0002673215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944417,0.0001583631,0.0001781736,0.001647427,0.000226675,0.0003374205,0.000484287,0.00005863663,0.002467286],"genre_scores_gemma":[0.9971977,0.00005813311,0.0009672729,0.0009488872,0.00006344888,0.00002223399,0.0001406847,0.000002521022,0.0005990445],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02764739,"threshold_uncertainty_score":0.4871695,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2106463928","doi":"10.1111/j.1364-3703.2009.00558.x","title":"Patterns of differential gene expression in <i>Brassica napus</i> cultivars infected with <i>Sclerotinia sclerotiorum</i>","year":2009,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":142,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Plant Biotechnology Institute; Agriculture and Agri-Food Canada","funders":"Saskatchewan Canola Development Commission; Ministry of Agriculture - Saskatchewan","keywords":"Biology; Sclerotinia sclerotiorum; WRKY protein domain; MYB; Jasmonic acid; Gene; Methyl jasmonate; Gene expression; Arabidopsis; Jasmonate; Botany; Genetics; Transcriptome; Mutant","authors":[{"name":"Jianwei Zhao","is_ca":true},{"name":"L. Buchwaldt","is_ca":true},{"name":"S. R. Rimmer","is_ca":true},{"name":"Andrew Sharpe","is_ca":true},{"name":"Linda McGregor","is_ca":true},{"name":"Diana Bekkaoui","is_ca":true},{"name":"Dwayne D. Hegedus","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007519955281723526,"gpt":0.1804310307137438,"spread":0.1729110754320203,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001093155,0.0002292563,0.000371174,0.00004055112,0.00006928034,0.00001713903,0.000235422,0.0001940838,0.00005555971],"category_scores_gemma":[0.00001195204,0.00009189391,0.00008165208,0.0002209156,0.00003320295,0.00004970715,0.00004904553,0.0001811243,0.000004067549],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001290888,"about_ca_system_score_gemma":0.000008375255,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001298225,"about_ca_topic_score_gemma":0.0002500791,"domain_scores_codex":[0.9984667,0.0001664178,0.0003122522,0.0004186616,0.0002300901,0.00040588],"domain_scores_gemma":[0.9995577,0.00004112181,0.0001687955,0.0001064577,0.00003801732,0.00008790614],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001379905,0.0002412965,0.005812705,0.000005974041,0.000005217499,0.0006577016,0.00003218679,0.0000186868,0.99125,0.0001376877,0.00001639641,0.001684121],"study_design_scores_gemma":[0.00046536,0.000527682,0.2508859,0.0001113315,0.00001029601,0.0001311064,0.00002401512,0.00001777659,0.7475237,0.00006219978,0.00004857105,0.0001921285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977201,0.00005516148,0.001103768,0.0001728838,0.0000697513,0.0002731601,0.0004621199,0.00004772703,0.0000953886],"genre_scores_gemma":[0.9987373,0.0000564659,0.0004504453,0.0002115667,0.00003694848,0.00001511642,0.0004736009,0.000002137584,0.00001641053],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2450732,"threshold_uncertainty_score":0.3747325,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2759595698","doi":"10.1093/jxb/erx338","title":"RNA sequencing of Brassica napus reveals cellular redox control of Sclerotinia infection","year":2017,"lang":"en","type":"article","venue":"Journal of Experimental Botany","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":139,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"National Natural Science Foundation of China","keywords":"Sclerotinia sclerotiorum; Sclerotinia; Biology; Arabidopsis; Brassica; Gene; Pathogen; Fungus; Plant disease resistance; Mutant; Cell biology; Botany; Genetics","authors":[{"name":"Ian J. Girard","is_ca":true},{"name":"Chaobo Tong","is_ca":false},{"name":"Michael G. Becker","is_ca":true},{"name":"Xingyu Mao","is_ca":true},{"name":"Junyan Huang","is_ca":false},{"name":"Teresa de Kievit","is_ca":true},{"name":"W. G. Dilantha Fernando","is_ca":true},{"name":"Shengyi Liu","is_ca":false},{"name":"Mark F. Belmonte","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02281772222218752,"gpt":0.2402271115978391,"spread":0.2174093893756516,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003949419,0.0001032869,0.0003382688,0.0000155434,0.0002069851,0.00003522161,0.0002454704,0.00007538594,0.0001047707],"category_scores_gemma":[0.00006037725,0.00004160081,0.0002045908,0.00004636154,0.00008594448,0.0001881705,0.00003584291,0.00009976873,0.000001481892],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004770708,"about_ca_system_score_gemma":0.00001394423,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006688343,"about_ca_topic_score_gemma":0.00002704567,"domain_scores_codex":[0.9989269,0.00006241602,0.00048268,0.0001022035,0.0002803977,0.0001454182],"domain_scores_gemma":[0.998435,0.00004894834,0.00124703,0.00007582527,0.0001116409,0.00008161072],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001070948,0.00008774182,0.001902436,0.000003788841,0.00002867155,0.00002300618,0.00004054302,0.000001048447,0.9964291,0.0001253869,0.00005116434,0.001199953],"study_design_scores_gemma":[0.0003994248,0.000692407,0.021258,0.0001775963,0.00001935711,0.00004047799,0.0002113948,0.00002045573,0.9767684,0.0001330047,0.0001976808,0.00008180894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974768,0.001283399,0.00003987724,0.00009017109,0.0003447149,0.00009567667,0.0000370864,0.000003999337,0.000628245],"genre_scores_gemma":[0.9993992,0.00009194029,0.0001950497,0.00002141993,0.0002202184,0.000001155007,7.763888e-7,0.000001102784,0.00006914096],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01966077,"threshold_uncertainty_score":0.1696432,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2573506281","doi":"10.1023/b:euph.0000030671.03694.bb","title":"Andean beans (Phaseolus vulgaris L.) with resistance to the angular leaf spot pathogen (Phaeoisariopsis griseola) in southern and eastern Africa","year":2004,"lang":"en","type":"article","venue":"Euphytica","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":136,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Brampton Civic Hospital","funders":"","keywords":"Biology; Phaseolus; Cultivar; Leaf spot; Tropics; Resistance (ecology); Plant disease resistance; Veterinary medicine; Agronomy; Ecology; Gene","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.01152593559223953,"gpt":0.1813427481366384,"spread":0.1698168125443989,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002966975,0.0002234394,0.0002411701,0.0000230531,0.0002782883,0.00008860164,0.0002949467,0.00008770301,0.00004857496],"category_scores_gemma":[0.00002688923,0.000075456,0.00005492144,0.0004642777,0.00008404822,0.00006269157,0.00007483821,0.0001601686,0.00004983767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004117256,"about_ca_system_score_gemma":0.00001717615,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000168018,"about_ca_topic_score_gemma":0.025415,"domain_scores_codex":[0.9984899,0.00007056303,0.0002093454,0.000464375,0.0002980254,0.0004678293],"domain_scores_gemma":[0.9995096,0.00007058477,0.00006672914,0.0001416351,0.00003989642,0.0001715602],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001919337,0.0007576157,0.01782065,0.000077651,0.0001232188,0.001590118,0.01640679,0.0004419074,0.9214802,0.004204179,0.001117228,0.03406105],"study_design_scores_gemma":[0.007790238,0.004237785,0.3072392,0.001817284,0.0003336344,0.000351737,0.03582612,0.0003179092,0.02212567,0.0160158,0.5990092,0.004935467],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927539,0.0008144369,0.0002362556,0.003560894,0.0000615117,0.0003948993,0.0003674766,0.00005066262,0.001759922],"genre_scores_gemma":[0.9969689,0.00003512984,0.0005304516,0.0003044784,0.0001637868,0.00003042667,0.00002081108,0.000003685916,0.001942376],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8993546,"threshold_uncertainty_score":0.9923686,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2058186071","doi":"10.1186/s12870-014-0408-y","title":"Association mapping of QTLs for sclerotinia stem rot resistance in a collection of soybean plant introductions using a genotyping by sequencing (GBS) approach","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":130,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Sclerotinia; Germplasm; Genotyping; Association mapping; Stem rot; Sclerotinia sclerotiorum; Plant disease resistance; Genetics; Microsatellite; Inoculation; Genetic marker; Quantitative trait locus; Biotechnology; Single-nucleotide polymorphism; Allele; Genotype; Horticulture; Gene","authors":[{"name":"Elmer Iquira","is_ca":true},{"name":"Humira Sonah","is_ca":true},{"name":"François Belzile","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09083356826366135,"gpt":0.2294711929480761,"spread":0.1386376246844147,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009627555,0.0001170199,0.0003355028,0.00005410894,0.0001069653,0.000009189453,0.0001216785,0.0001842663,0.000002365288],"category_scores_gemma":[0.0001206234,0.00005924975,0.0000613592,0.0003604859,0.00002764218,0.00004902909,0.00002628151,0.00008180815,3.225628e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002256626,"about_ca_system_score_gemma":0.00005792003,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002749151,"about_ca_topic_score_gemma":0.003739299,"domain_scores_codex":[0.9987127,0.0001871221,0.0004252933,0.0002871633,0.000110188,0.0002775867],"domain_scores_gemma":[0.9991795,0.0001894901,0.0004400575,0.00004589736,0.00009963861,0.00004535827],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001719936,0.00004389641,0.01015926,0.00004558892,0.00001541335,2.448281e-7,0.0001933149,0.00006841603,0.9881921,0.0006294208,0.0004024982,0.00007785896],"study_design_scores_gemma":[0.00894312,0.003013032,0.08035664,0.002083139,0.0003996496,0.0002748925,0.03175544,0.0632677,0.7683997,0.01027729,0.02756541,0.003663985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937333,0.00031981,0.003274022,0.00005718736,0.0002344005,0.0004804525,0.001777163,0.00002100098,0.0001026468],"genre_scores_gemma":[0.9912879,0.00002807819,0.007695253,0.00001449877,0.0001732855,0.00003746069,0.0006010685,0.000001799304,0.000160643],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2197924,"threshold_uncertainty_score":0.2416135,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2053858783","doi":"10.1016/j.fgb.2004.03.002","title":"Interaction of Sclerotinia sclerotiorum with Brassica napus: cloning and characterization of endo- and exo-polygalacturonases expressed during saprophytic and parasitic modes","year":2004,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":117,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Saskatchewan Canola Development Commission; Ministry of Agriculture - Saskatchewan","keywords":"Sclerotinia sclerotiorum; Biology; Pectinase; Mycelium; Pectate lyase; Gene; Catabolite repression; Brassica; Sclerotinia; Biochemistry; Genetics; Botany; Microbiology; Enzyme; Mutant","authors":[{"name":"Rugang Li","is_ca":true},{"name":"Roger Rimmer","is_ca":true},{"name":"L. Buchwaldt","is_ca":true},{"name":"Andrew Sharpe","is_ca":true},{"name":"G. Séguin-Swartz","is_ca":true},{"name":"Dwayne D. Hegedus","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01740977397447074,"gpt":0.204867101367571,"spread":0.1874573273931003,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000435394,0.0001015833,0.0001735228,0.00001730458,0.00009578832,0.0000188301,0.00002998779,0.0000672338,0.000003688318],"category_scores_gemma":[0.000005642356,0.00004380146,0.00001133346,0.00004897626,0.0001330364,0.00003918553,0.00003148544,0.00004568245,5.721417e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003241494,"about_ca_system_score_gemma":0.000004429657,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002153248,"about_ca_topic_score_gemma":0.00006681337,"domain_scores_codex":[0.999458,0.00002696671,0.0001446874,0.0002035306,0.00003901199,0.0001278773],"domain_scores_gemma":[0.9997717,0.00003649991,0.0000899732,0.00002609246,0.00002797786,0.00004779169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007819765,0.00002224865,0.02372908,0.00003814917,0.00001004185,0.000001189255,0.00004866419,0.000005979154,0.9722754,0.000134934,3.529346e-8,0.003656029],"study_design_scores_gemma":[0.0002313473,0.0005270472,0.5101234,0.00008823725,0.00001400039,0.00002785489,0.000080659,0.00005870349,0.4886208,0.0001475766,0.00001013589,0.00007029929],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991467,0.0004920309,0.00002837162,0.00006750166,0.00002400004,0.0001251752,0.0001015421,0.000006932413,0.000007764371],"genre_scores_gemma":[0.9983321,0.001381636,0.0001989655,0.00001362705,0.00003537602,0.000006192494,0.00002699953,0.000001203358,0.000003910699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4863943,"threshold_uncertainty_score":0.1786172,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2100714136","doi":"10.2135/cropsci2013.02.0081","title":"Breeding Common Bean for Resistance to White Mold: A Review","year":2013,"lang":"en","type":"review","venue":"Crop Science","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":114,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Germplasm; Biology; Phaseolus; Cultivar; Resistance (ecology); Plant disease resistance; Plant breeding; White (mutation); Biotechnology; Selection (genetic algorithm); Molecular breeding; Agronomy; Genetics; Gene","authors":[{"name":"Howard F. Schwartz","is_ca":false},{"name":"Shree P. Singh","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07551512323158634,"gpt":0.3096316811448032,"spread":0.2341165579132169,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001300811,0.00040326,0.001277989,0.00005069657,0.0007760635,0.0002945959,0.001774929,0.0001451008,0.000139817],"category_scores_gemma":[0.0002043594,0.0001354925,0.0003871289,0.001855352,0.0001968233,0.0001900446,0.0002586818,0.0001786454,0.0001723125],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001192944,"about_ca_system_score_gemma":0.00008642999,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009271346,"about_ca_topic_score_gemma":0.00027498,"domain_scores_codex":[0.9971041,0.00006194461,0.000584533,0.0009611691,0.0005284273,0.0007598135],"domain_scores_gemma":[0.9986684,0.0001797132,0.0003623971,0.0002222647,0.0002047969,0.0003624599],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000002093649,0.00001860471,8.318814e-7,0.00746599,0.000005219339,0.000005448205,0.000006556802,8.486208e-8,0.00443904,0.0005998166,0.01185852,0.9755978],"study_design_scores_gemma":[0.00001715212,0.00008772236,0.000009326014,0.03266369,0.00008389394,0.00001502097,0.000008306745,0.00000169594,0.00002708807,0.00008359123,0.966601,0.0004014719],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00004278515,0.9945712,0.00003138106,0.0004088977,0.0003863439,0.00240037,0.0005118222,0.00006581205,0.001581405],"genre_scores_gemma":[0.00001045207,0.991376,0.001413522,0.000568818,0.000259434,0.000456725,0.00007343728,0.000003396292,0.005838214],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9751963,"threshold_uncertainty_score":0.5968932,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1986896483","doi":"10.2135/cropsci2002.5440","title":"Genetic Mapping of Agronomic Traits in Common Bean","year":2002,"lang":"en","type":"article","venue":"Crop Science","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":112,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Guelph","funders":"Commonwealth Scientific and Industrial Research Organisation","keywords":"Biology; Quantitative trait locus; Amplified fragment length polymorphism; Phaseolus; Genetics; RAPD; Restriction fragment length polymorphism; Xanthomonas campestris; Genetic linkage; Genetic marker; Population; Marker-assisted selection; Genotype; Gene; Botany; Genetic diversity","authors":[{"name":"Bunyamin Tar’an","is_ca":true},{"name":"Thomas E. Michaels","is_ca":true},{"name":"K. Peter Pauls","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02870423627497248,"gpt":0.1980479393457309,"spread":0.1693437030707584,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001956436,0.00005852383,0.0001074036,0.00002422872,0.0001191082,0.00002652257,0.0003495106,0.00002588675,0.0001192178],"category_scores_gemma":[0.00001008022,0.00002256462,0.00002734371,0.0005488337,0.0001953435,0.00007338467,0.00004236918,0.00004260124,0.0000172854],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001928668,"about_ca_system_score_gemma":0.000004235796,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004998357,"about_ca_topic_score_gemma":0.0004662713,"domain_scores_codex":[0.9992565,0.00001572202,0.0001554189,0.0001996586,0.0001455543,0.0002271259],"domain_scores_gemma":[0.9998153,0.0000253216,0.00005375263,0.00003473062,0.00001663656,0.00005427375],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[9.01233e-7,0.00002357094,0.002891038,0.000001909771,2.535853e-7,0.000004237997,0.00006972815,0.00001845586,0.9594614,0.0001227081,0.00001311751,0.03739268],"study_design_scores_gemma":[0.00005904875,0.00005838922,0.9751142,0.00002916706,0.000001013606,0.000008299028,0.0002117791,0.001488258,0.02217107,0.0002908803,0.0004648566,0.0001030814],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981251,0.000195028,0.000008285989,0.0001071192,0.00005691525,0.00006724663,0.00001343061,0.00001005776,0.001416831],"genre_scores_gemma":[0.9994774,0.00002707746,0.0003257592,0.00003801869,0.00002469892,0.000001863874,6.112286e-7,2.375999e-7,0.0001042881],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9722231,"threshold_uncertainty_score":0.1305352,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2807780209","doi":"10.1111/nph.15259","title":"White seed color in common bean (<i>Phaseolus vulgaris</i>) results from convergent evolution in the <i>P</i> (<i>pigment</i>) gene","year":2018,"lang":"en","type":"article","venue":"New Phytologist","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":110,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Phaseolus; Genetics; Allele; Gene; White (mutation); Phenotype; Quantitative trait locus; Genome-wide association study; Botany; Genotype; Single-nucleotide polymorphism","authors":[{"name":"Phillip E. McClean","is_ca":false},{"name":"Kirstin E. Bett","is_ca":true},{"name":"Robert Stonehouse","is_ca":true},{"name":"Rian Lee","is_ca":false},{"name":"Stéphanie Pflieger","is_ca":false},{"name":"Samira Mafi Moghaddam","is_ca":false},{"name":"Valérie Geffroy","is_ca":false},{"name":"P.N. Miklas","is_ca":false},{"name":"Sujan Mamidi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01977164666085841,"gpt":0.2247147848380694,"spread":0.204943138177211,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005537113,0.0002257817,0.0003211888,0.0000242545,0.0002098098,0.00006155625,0.0005458445,0.000191356,0.00008533098],"category_scores_gemma":[0.00004637899,0.0000852821,0.00008288849,0.0005455188,0.0001658636,0.00008760569,0.00008431346,0.0002313967,0.00007436437],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001009544,"about_ca_system_score_gemma":0.00002804964,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005521044,"about_ca_topic_score_gemma":0.1587053,"domain_scores_codex":[0.9979383,0.0002669198,0.0004932096,0.0005222606,0.0002949039,0.0004843511],"domain_scores_gemma":[0.9992898,0.0002251866,0.0001895614,0.0001626116,0.00003766263,0.00009514448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0011978,0.0004474822,0.09153119,0.000003704727,0.00001509315,0.0001636734,0.0005368516,0.00003624011,0.8936518,0.0005436818,0.009126374,0.002746154],"study_design_scores_gemma":[0.002024786,0.0006846036,0.9499615,0.00005877353,0.00002105455,0.00001834146,0.0008729908,0.0004316015,0.02644404,0.003675961,0.01538956,0.0004167252],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992749,0.0003333336,0.00005620337,0.003141546,0.0004903933,0.0004300593,0.00071671,0.00005299372,0.002029713],"genre_scores_gemma":[0.9973558,0.00007632467,0.0001769912,0.001069411,0.0005222515,0.00002194594,0.000441448,0.000001642001,0.0003341753],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8672077,"threshold_uncertainty_score":0.8566461,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2151476984","doi":"10.1111/j.1364-3703.2012.00798.x","title":"Monolignol biosynthesis is associated with resistance to <i>Sclerotinia sclerotiorum</i> in <i>Camelina sativa</i>","year":2012,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":108,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Canadian Food Inspection Agency; Ministry of Agriculture - Saskatchewan; Agilent Technologies","keywords":"Sclerotinia sclerotiorum; Camelina sativa; Biology; Camelina; Monolignol; Lignin; Plant disease resistance; Botany; Gene; Biochemistry; Crop; Biosynthesis; Biotechnology; Agronomy","authors":[{"name":"Christina Eynck","is_ca":true},{"name":"G. Séguin-Swartz","is_ca":true},{"name":"Wayne E. Clarke","is_ca":true},{"name":"Isobel A. P. Parkin","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01261381829571135,"gpt":0.1879062440970815,"spread":0.1752924258013702,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005070435,0.0002970162,0.0004207233,0.00005565704,0.0001420852,0.00003106219,0.0003110959,0.0002474711,0.00008021958],"category_scores_gemma":[0.00008759816,0.0001317582,0.00008352684,0.0006239014,0.00005373572,0.00008924783,0.00008268037,0.0001956,0.00008515418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005645797,"about_ca_system_score_gemma":0.00001105887,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001726671,"about_ca_topic_score_gemma":0.001687695,"domain_scores_codex":[0.9977561,0.0002392158,0.0003240505,0.0004989406,0.0002867942,0.0008949502],"domain_scores_gemma":[0.999288,0.0001498939,0.0001416526,0.0001411531,0.00004803528,0.000231318],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001011347,0.0001759299,0.006767299,0.000004670197,0.00001583601,0.0004071297,0.0001662182,0.0000047388,0.9904917,0.0003787569,0.0004946176,0.0009919852],"study_design_scores_gemma":[0.0004465517,0.0003136486,0.237051,0.0002909651,0.00003607304,0.000130038,0.0002242111,0.000009918247,0.7564045,0.0001830175,0.004175513,0.0007345843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958887,0.0003311439,0.0001085442,0.001267928,0.0001059999,0.0004325303,0.0007504128,0.0000859533,0.001028817],"genre_scores_gemma":[0.9965823,0.00004258901,0.0005668697,0.002355861,0.00006039906,0.00007837353,0.000126515,0.000005227968,0.0001818646],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2340872,"threshold_uncertainty_score":0.5372944,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2129957090","doi":"10.1046/j.1365-294x.2001.01244.x","title":"A microbial population–species interface: nested cladistic and coalescent inference with multilocus data","year":2001,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":107,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Coalescent theory; Biology; Evolutionary biology; Maximum parsimony; Cladistics; Population; Phylogeography; Most recent common ancestor; Phylogenetics; Genetics; Gene","authors":[{"name":"Ignazio Carbone","is_ca":true},{"name":"Linda M. Kohn","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02289321339421135,"gpt":0.2304018173023756,"spread":0.2075086039081643,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007048663,0.0001126695,0.0001529719,0.00001085816,0.0001180754,0.00004000348,0.0002207747,0.00008152223,0.0001134314],"category_scores_gemma":[0.00003656962,0.00004405022,0.00001415475,0.0001122123,0.00006382572,0.000045595,0.0001471073,0.00007567176,0.000009732256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001522622,"about_ca_system_score_gemma":0.000005773754,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007215614,"about_ca_topic_score_gemma":0.01091017,"domain_scores_codex":[0.9992045,0.00006295003,0.0001235124,0.0003228995,0.00007037954,0.0002157721],"domain_scores_gemma":[0.9996954,0.00006010798,0.00005589906,0.00009630608,0.00002915465,0.00006313538],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009522363,0.0000838216,0.07229801,0.000007001203,0.00001751391,0.0002690076,0.00001695495,0.00003077105,0.9224471,0.0004853729,0.00009122292,0.004157954],"study_design_scores_gemma":[0.0004170375,0.0004352972,0.9773514,0.00003624449,0.00004256474,0.0002858175,0.0001174955,0.001008945,0.003419386,0.0002710379,0.01629366,0.0003210754],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982501,0.0001305333,0.0005258989,0.000583548,0.0000692734,0.00016402,0.0001363654,0.00003069058,0.000109598],"genre_scores_gemma":[0.9987859,0.00005413681,0.0003398546,0.000174996,0.00003183133,0.000005430957,0.000356312,0.000001015451,0.000250526],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9190277,"threshold_uncertainty_score":0.608813,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3046946043","doi":"10.3389/fpls.2020.01172","title":"Effects of Nitrogen Application on Nitrogen Fixation in Common Bean Production","year":2020,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":105,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Agriculture and Agri-Food Canada; University of Guelph","funders":"Agriculture and Agri-Food Canada; Canada First Research Excellence Fund; University of Guelph","keywords":"Rhizobia; Nitrogen fixation; Phaseolus; Agronomy; Biology; Nitrogen; Crop; Crop yield; Chemistry","authors":[{"name":"Yarmilla Reinprecht","is_ca":true},{"name":"Lyndsay Schram","is_ca":true},{"name":"Frédéric Marsolais","is_ca":true},{"name":"Thomas H. Smith","is_ca":true},{"name":"Brett Hill","is_ca":true},{"name":"K. Peter Pauls","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008249654289885612,"gpt":0.1864849417407186,"spread":0.178235287450833,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003159008,0.00008335005,0.000156669,0.00004721218,0.0000809222,0.00001404201,0.0002732243,0.00004533461,0.000001683021],"category_scores_gemma":[0.00006857658,0.0000383904,0.00002363584,0.0009020051,0.00008149024,0.0001205065,0.00002793388,0.00008541398,0.000003577615],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004850759,"about_ca_system_score_gemma":0.0000118565,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004296953,"about_ca_topic_score_gemma":0.0001694102,"domain_scores_codex":[0.9989648,0.00004480679,0.0001864869,0.0003310209,0.0002761014,0.0001967707],"domain_scores_gemma":[0.9997365,0.000037648,0.0001050668,0.00004109465,0.00001950976,0.00006019637],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007842744,0.0000612078,0.07080742,0.00001816885,0.000001123201,0.000005194171,0.0001150712,0.0001095901,0.9179682,0.0001905677,0.0002092387,0.01043579],"study_design_scores_gemma":[0.0002206778,0.0003093709,0.1458897,0.00009820735,0.000006462601,0.000003890869,0.0003449611,0.006303902,0.8409687,0.00511411,0.0005296424,0.0002103322],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985495,0.00008589396,0.0001966571,0.000429825,0.0001966618,0.0003873336,0.00004870962,0.00001684981,0.00008854957],"genre_scores_gemma":[0.999193,0.00004208308,0.000538857,0.0001010914,0.0000535933,0.00002191906,0.00004485475,5.263594e-7,0.00000404797],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07699949,"threshold_uncertainty_score":0.1565515,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2052902740","doi":"10.1002/pmic.200600424","title":"The proteome of the phytopathogenic fungus <b><i>Sclerotinia sclerotiorum</i></b>","year":2006,"lang":"en","type":"article","venue":"PROTEOMICS","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":103,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Proteome; Sclerotinia sclerotiorum; Mycelium; Biology; Virulence; Proteomics; Fungus; Microbiology; Effector; Ascomycota; Biochemistry; Botany; Gene","authors":[{"name":"William Yajima","is_ca":true},{"name":"Nat N. V. Kav","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006709955777391684,"gpt":0.1581333496229043,"spread":0.1514233938455126,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003998927,0.0001387028,0.0001427401,0.000004578127,0.0005785685,0.00005636792,0.0005530867,0.00008362898,0.00002386384],"category_scores_gemma":[0.00003024079,0.00003509151,0.0001668075,0.0002969424,0.000120007,0.00004197757,0.000116218,0.0001449268,0.00001462178],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000186717,"about_ca_system_score_gemma":0.00001520583,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006364344,"about_ca_topic_score_gemma":0.0008526931,"domain_scores_codex":[0.9988295,0.00008094632,0.0002879013,0.0002099099,0.0002658723,0.0003258417],"domain_scores_gemma":[0.9994594,0.00006838792,0.0002264402,0.000139921,0.00007223235,0.00003365829],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002326729,0.00003503287,0.002540919,0.000005466735,0.000003536444,6.808239e-7,0.000005567053,0.00001666978,0.9926117,0.001611841,0.000135067,0.003010266],"study_design_scores_gemma":[0.0001901719,0.0001139879,0.328314,0.0000589808,0.00001567818,0.00001661143,0.00005976849,0.0001058715,0.6510839,0.007449086,0.01236617,0.0002258258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964924,0.0002889677,0.00003310891,0.001029184,0.0002346035,0.001100135,0.0001112405,0.0000379625,0.0006723657],"genre_scores_gemma":[0.9981981,0.00004545459,0.0004086771,0.00006025079,0.0002840961,0.0001196939,0.000008219743,0.000001788329,0.0008737021],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3415278,"threshold_uncertainty_score":0.4449939,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2140085780","doi":"10.1139/g07-007","title":"Development, characterization, and comparative analysis of polymorphism at common bean SSR loci isolated from genic and genomic sources","year":2007,"lang":"en","type":"article","venue":"Genome","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":103,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"","keywords":"Biology; Microsatellite; UniGene; Expressed sequence tag; Genetics; Phaseolus; Genotype; Allele; Genome; Gene; Botany","authors":[{"name":"Luiz Ricardo Hanai","is_ca":false},{"name":"Tatiana de Campos","is_ca":false},{"name":"Luís Eduardo Aranha Camargo","is_ca":false},{"name":"Luciana Lasry Benchimol‐Reis","is_ca":false},{"name":"Anete Pereira de Souza","is_ca":false},{"name":"Maeli Melotto","is_ca":false},{"name":"Sérgio Augusto Moraes Carbonell","is_ca":false},{"name":"Alisson Fernando Chioratto","is_ca":false},{"name":"Luciano Consoli","is_ca":false},{"name":"Eduardo F. Formighieri","is_ca":false},{"name":"Marcos Vinícius Bohrer Monteiro Siqueira","is_ca":false},{"name":"Siu Mui Tsai","is_ca":false},{"name":"Maria Lúcia Carneiro Vieira","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02077158557426284,"gpt":0.2032892849907848,"spread":0.1825176994165219,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001711291,0.0001121334,0.0002884554,0.00003853564,0.0002057131,0.00002149376,0.00008723715,0.00006589873,0.0001410596],"category_scores_gemma":[0.000001486752,0.0000502406,0.00003831846,0.0002897348,0.00005268959,0.00003508656,0.00007636322,0.00003755949,0.000004433092],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002726887,"about_ca_system_score_gemma":0.000003848777,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009590072,"about_ca_topic_score_gemma":0.004248047,"domain_scores_codex":[0.9992239,0.00002528115,0.0002446954,0.0002252346,0.0001062276,0.0001746341],"domain_scores_gemma":[0.9996443,0.000050525,0.0001547257,0.00003700672,0.00003209389,0.00008130957],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000425008,0.0000156352,0.0171689,0.000001632568,0.0001744924,0.000003741892,0.0007708953,0.000001305483,0.980083,0.00002643071,6.556629e-7,0.001710842],"study_design_scores_gemma":[0.00007974318,0.00003500324,0.9810248,0.000003215521,0.0001088066,0.000002889162,0.0002880337,0.00006628566,0.01392609,0.00001240046,0.004323382,0.00012935],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984325,0.0007709148,0.0001349504,0.00003056804,0.00001695298,0.00008955139,0.000449322,0.00001523961,0.0000600304],"genre_scores_gemma":[0.9981897,0.000101356,0.000199896,0.00005631688,0.00003064384,0.000001293876,0.001209075,5.788939e-7,0.0002111678],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9661569,"threshold_uncertainty_score":0.237051,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2567234905","doi":"10.3389/fmicb.2016.01966","title":"Inoculation of Soil with Plant Growth Promoting Bacteria Producing 1-Aminocyclopropane-1-Carboxylate Deaminase or Expression of the Corresponding acdS Gene in Transgenic Plants Increases Salinity Tolerance in Camelina sativa","year":2016,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":101,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan; University of Waterloo; Agriculture and Agri-Food Canada","funders":"Natural Resources Canada; Agriculture and Agri-Food Canada","keywords":"Camelina; Biology; Camelina sativa; Canola; Genetically modified crops; Shoot; Horticulture; Agronomy; Salinity; Crop; Transgene; Gene","authors":[{"name":"Zohreh Heydarian","is_ca":true},{"name":"Min Yu","is_ca":true},{"name":"Margaret Y. Gruber","is_ca":true},{"name":"Bernard R. Glick","is_ca":true},{"name":"Rong Zhou","is_ca":true},{"name":"Dwayne D. Hegedus","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01012698547854283,"gpt":0.1857898860852446,"spread":0.1756629006067018,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004661422,0.0001674081,0.0004034478,0.00007143707,0.00004954778,0.000004451184,0.0002395672,0.0001404899,0.0000102439],"category_scores_gemma":[0.00009095096,0.00005150863,0.00003925562,0.0003387777,0.0001086151,0.0000757874,0.00005300317,0.0001196165,2.130448e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006245585,"about_ca_system_score_gemma":0.00003271487,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003290306,"about_ca_topic_score_gemma":0.006830551,"domain_scores_codex":[0.9983938,0.000404204,0.0004715578,0.000358552,0.00006712433,0.0003047428],"domain_scores_gemma":[0.9994209,0.0001442177,0.0002960933,0.00008356726,0.00002826702,0.00002689962],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00101069,0.00007097564,0.2801733,0.00003353145,0.000003516215,0.00001368309,0.0002911966,0.00001791172,0.7168096,8.064534e-7,0.000004047748,0.001570733],"study_design_scores_gemma":[0.0004596112,0.0001218236,0.3822229,0.0007208034,0.000003571914,0.00002315239,0.0001544587,0.0000388327,0.6161271,0.00002129834,0.000005575878,0.0001008597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987288,0.0001446933,0.00004980596,0.00004400236,0.0001718124,0.0004023591,0.0004479219,0.000007729734,0.000002839234],"genre_scores_gemma":[0.9987923,0.0001391967,0.0009356559,0.00000943647,0.00002629032,0.00001709979,0.00006243835,0.000002229156,0.0000153402],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1020496,"threshold_uncertainty_score":0.3811608,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2003583120","doi":"10.1094/mpmi-05-13-0145-r","title":"Novel Secretory Protein Ss-Caf1 of the Plant-Pathogenic Fungus <i>Sclerotinia sclerotiorum</i> Is Required for Host Penetration and Normal Sclerotial Development","year":2013,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":100,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Program for Changjiang Scholars and Innovative Research Team in University; Special Fund for Agro-scientific Research in the Public Interest; Earmarked Fund for China Agriculture Research System; National Natural Science Foundation of China; University of Guelph; University of Kentucky","keywords":"Sclerotinia sclerotiorum; Appressorium; Nicotiana benthamiana; Biology; Mutant; Pathogenic fungus; Gene; Microbiology; Chemistry; Cell biology; Biochemistry; Botany","authors":[{"name":"Xueqiong Xiao","is_ca":false},{"name":"Jiǎtāo Xiè","is_ca":false},{"name":"Jiāsēn Chéng","is_ca":false},{"name":"Guoqing Li","is_ca":false},{"name":"Xianhong Yi","is_ca":false},{"name":"Dàohóng Jiāng","is_ca":false},{"name":"Yànpíng Fù","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01990092479036248,"gpt":0.1948744310460144,"spread":0.1749735062556519,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001512834,0.0002378886,0.0002216971,0.00003093211,0.0004593201,0.0001094121,0.0002802846,0.0001306053,0.0001986414],"category_scores_gemma":[0.00002703173,0.0001101492,0.0001520542,0.0001604792,0.0000687652,0.0002037848,0.0001157401,0.0001683324,0.00002065795],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004172665,"about_ca_system_score_gemma":0.00004173379,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001405872,"about_ca_topic_score_gemma":0.001214559,"domain_scores_codex":[0.9985583,0.00005206784,0.000433506,0.0003796629,0.0002162366,0.0003602286],"domain_scores_gemma":[0.9993089,0.00006674595,0.0002713959,0.0001166471,0.0001370543,0.00009920296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004902356,0.00009839993,0.0001255698,0.00002490085,0.00004039706,0.000001473719,0.0001137336,0.000004070561,0.9972885,0.0001136898,0.0006909085,0.001449287],"study_design_scores_gemma":[0.0003752533,0.0001197149,0.03432678,0.0002372209,0.00003394263,0.0001070443,0.0001959458,0.0001853314,0.9555324,0.00003391051,0.008554359,0.0002980977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945099,0.00009229303,0.0009141216,0.0005570746,0.0004043804,0.001457973,0.001913969,0.00003631569,0.0001139821],"genre_scores_gemma":[0.9965364,0.00001379731,0.001826362,0.0003767493,0.00009698109,0.0002540558,0.0004033229,0.000005148259,0.0004871612],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04175615,"threshold_uncertainty_score":0.4491753,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2130763234","doi":"10.3852/08-120","title":"Melanin synthesis by Sclerotinia sclerotiorum","year":2009,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":93,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Sclerotinia sclerotiorum; Mycelium; Melanin; Biology; Fungus; Hypha; Chrysosporium; Phanerochaete; Microbiology; Botany; Biochemistry; Enzyme","authors":[{"name":"Michael J. Butler","is_ca":true},{"name":"R. B. Gardiner","is_ca":false},{"name":"Alan W. Day","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01149333440022367,"gpt":0.1849108534878717,"spread":0.173417519087648,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002152311,0.0001404882,0.0001816003,0.000008550074,0.000225843,0.00005157841,0.000266353,0.0001399771,0.001459229],"category_scores_gemma":[0.00005104237,0.00004879423,0.00007609114,0.0002148924,0.00002558067,0.00005702616,0.00002543284,0.00009584428,0.0002794311],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001949696,"about_ca_system_score_gemma":0.000003486971,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001499118,"about_ca_topic_score_gemma":0.00006434942,"domain_scores_codex":[0.9989807,0.0000520282,0.000161081,0.000280558,0.0001620481,0.0003635819],"domain_scores_gemma":[0.9996481,0.0001116094,0.00006660847,0.00005358908,0.00002580392,0.00009426914],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001566036,0.0000717502,0.0005883936,6.569397e-7,0.000003741455,0.000008821986,0.000003621209,6.263707e-7,0.9317232,0.0004292602,0.02617814,0.04097614],"study_design_scores_gemma":[0.0001934279,0.0009009125,0.6777637,0.00005374625,0.00002855658,0.00002458688,0.000168128,0.00005428162,0.2214413,0.001759857,0.0969813,0.00063014],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911035,0.0001597775,0.00001529328,0.002444163,0.0001198424,0.0001754554,0.0001601988,0.0001694954,0.005652272],"genre_scores_gemma":[0.997334,0.00005015817,0.0002358138,0.001099388,0.00009146109,0.00001688455,0.00003753157,5.975746e-7,0.00113416],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7102818,"threshold_uncertainty_score":0.9994535,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3161653107","doi":"10.1038/s41467-021-22858-x","title":"The tepary bean genome provides insight into evolution and domestication under heat stress","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":93,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"National Research Council Canada; Saskatchewan Research Council (Canada); Global Institute for Water Security; University of Saskatchewan","funders":"Agricultural Research Service; U.S. Department of Agriculture; College of Engineering, Michigan State University; Saskatchewan Pulse Growers; United States Agency for International Development; Michigan State University","keywords":"Phaseolus; Biology; Domestication; Legume; Adaptation (eye); Genome; Gene; Agronomy; Biotechnology; Genetics","authors":[{"name":"Samira Mafi Moghaddam","is_ca":false},{"name":"Atena Oladzad","is_ca":false},{"name":"ChuShin Koh","is_ca":true},{"name":"Larissa Ramsay","is_ca":true},{"name":"John P. Hart","is_ca":false},{"name":"Sujan Mamidi","is_ca":false},{"name":"Genevieve M. Hoopes","is_ca":false},{"name":"Avinash Sreedasyam","is_ca":false},{"name":"Andrew T. Wiersma","is_ca":false},{"name":"Dongyan Zhao","is_ca":false},{"name":"Jane Grimwood","is_ca":false},{"name":"John P. Hamilton","is_ca":false},{"name":"Jerry Jenkins","is_ca":false},{"name":"Brieanne Vaillancourt","is_ca":false},{"name":"Joshua C. Wood","is_ca":false},{"name":"Jeremy Schmutz","is_ca":false},{"name":"Sateesh Kagale","is_ca":true},{"name":"Timothy G. Porch","is_ca":false},{"name":"Kirstin E. Bett","is_ca":true},{"name":"C. Robin Buell","is_ca":false},{"name":"Phillip E. McClean","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01531537595529393,"gpt":0.2392376404824834,"spread":0.2239222645271895,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001378928,0.00007559323,0.00007217853,0.000006823956,0.001103948,0.00009546482,0.0003919378,0.00013595,0.000006106498],"category_scores_gemma":[0.00007764966,0.00002673182,0.00003114579,0.0002502675,0.000108175,0.00007556815,0.0002138604,0.0002790458,0.000003899657],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003874025,"about_ca_system_score_gemma":0.00002094932,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003041898,"about_ca_topic_score_gemma":0.01546451,"domain_scores_codex":[0.9993512,0.0001465765,0.0001204705,0.0001543027,0.0001098618,0.0001175772],"domain_scores_gemma":[0.9991162,0.0003956694,0.00003721093,0.0002755692,0.0001272712,0.00004806682],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000007168997,0.00009161451,0.001041381,0.000005318723,0.0000176327,0.000001427746,0.0001091668,0.000006278253,0.889273,0.1025606,0.0001315306,0.006754943],"study_design_scores_gemma":[0.0001533411,0.00007099859,0.7056739,0.00006026963,0.00005533278,0.00004705987,0.002133868,0.0008257973,0.004115343,0.01807593,0.2684588,0.0003293744],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7367789,0.1819438,0.000328714,0.07403275,0.0003123181,0.0006355474,0.0002847638,0.0001694155,0.005513723],"genre_scores_gemma":[0.9942096,0.004174546,0.0007346782,0.0002152292,0.00005466779,0.00002644065,0.0003931278,7.975451e-7,0.0001909437],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8851576,"threshold_uncertainty_score":0.8629562,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2088503555","doi":"10.1371/journal.pone.0029943","title":"Evidence for a Common Toolbox Based on Necrotrophy in a Fungal Lineage Spanning Necrotrophs, Biotrophs, Endophytes, Host Generalists and Specialists","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":88,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"Wageningen University and Research","keywords":"Biology; Gene; Host (biology); Genetics; Sclerotinia sclerotiorum; Generalist and specialist species; Botany","authors":[{"name":"Marion Andrew","is_ca":true},{"name":"Reeta Barua","is_ca":true},{"name":"Steven M. Short","is_ca":true},{"name":"Linda M. Kohn","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1237629459786002,"gpt":0.2502352679739642,"spread":0.126472321995364,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003081829,0.0002450875,0.0003972946,0.00004038271,0.0002200689,0.00009917495,0.0002001901,0.0001344547,0.0000605191],"category_scores_gemma":[0.0001501274,0.0001142313,0.00009035342,0.0002677127,0.00005292918,0.0001861409,0.0000449382,0.0001691032,0.00001077756],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000596938,"about_ca_system_score_gemma":0.00001077388,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000160021,"about_ca_topic_score_gemma":0.0005138554,"domain_scores_codex":[0.9983043,0.0001081502,0.0002917707,0.000384484,0.0003213178,0.0005899566],"domain_scores_gemma":[0.9991139,0.000409176,0.0001247135,0.0001069581,0.00004794135,0.0001973052],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004016596,0.0007577924,0.027593,0.00006647467,0.00001442616,0.00002595492,0.00003255326,0.000007609877,0.9693617,0.000344622,0.00005709503,0.001337081],"study_design_scores_gemma":[0.001217142,0.001708513,0.7077252,0.001855701,0.0001104971,0.00001105662,0.00005920097,0.003575815,0.2813761,0.00007039616,0.001384907,0.0009054008],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962969,0.001814838,0.00002086272,0.0005341466,0.0001076964,0.0007247772,0.0003349241,0.00005119814,0.0001146018],"genre_scores_gemma":[0.9943886,0.0002320611,0.003424116,0.0005715237,0.001075293,0.0001195629,0.00006825048,0.000004234781,0.0001162955],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6879856,"threshold_uncertainty_score":0.4658215,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2098791681","doi":"10.1007/s10681-009-0095-1","title":"Mapping of QTLs detected in a Brassica napus DH population for resistance to Sclerotinia sclerotiorum in multiple environments","year":2009,"lang":"en","type":"article","venue":"Euphytica","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":87,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Winnipeg; University of Manitoba","funders":"","keywords":"Sclerotinia sclerotiorum; Biology; Sclerotinia; Quantitative trait locus; Doubled haploidy; Population; Brassica; Plant disease resistance; Genetics; Inoculation; Genetic linkage; Horticulture; Gene","authors":[{"name":"Xiangrui Yin","is_ca":false},{"name":"Bin Yi","is_ca":false},{"name":"Wei Chen","is_ca":false},{"name":"Weijie Zhang","is_ca":false},{"name":"Jinxing Tu","is_ca":false},{"name":"W. G. Dilantha Fernando","is_ca":true},{"name":"Tingdong Fu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02299135392843743,"gpt":0.2082205952901515,"spread":0.1852292413617141,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001947433,0.0001100844,0.0002027473,0.00004223759,0.00006575637,0.000013298,0.0001399055,0.00007614053,0.00001579912],"category_scores_gemma":[0.00009425397,0.00005567131,0.00004653654,0.0004168595,0.00001223201,0.000057676,0.00001866943,0.00006135781,0.000004719137],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004975119,"about_ca_system_score_gemma":0.000003361911,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003080421,"about_ca_topic_score_gemma":0.003550478,"domain_scores_codex":[0.9989333,0.00003681711,0.0003092692,0.0002742475,0.0001480493,0.0002982806],"domain_scores_gemma":[0.9996914,0.00009133438,0.00008675102,0.00005914093,0.00001165481,0.00005977427],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001191045,0.00009939712,0.01423111,0.000007271638,0.000001659603,0.000002548294,0.00005045096,0.00004847939,0.9770285,0.0001145463,0.00003062386,0.008266269],"study_design_scores_gemma":[0.0003517794,0.0001365764,0.9766713,0.0001766495,0.000001327106,3.228079e-7,0.0000600505,0.0002309988,0.02029862,0.0005091064,0.001428393,0.0001348684],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985677,0.0000398836,0.0001222317,0.000447619,0.00005390684,0.000586341,0.00008615702,0.00001550641,0.00008065133],"genre_scores_gemma":[0.997493,0.000009020981,0.002117324,0.0001029396,0.00004538211,0.00003190217,0.00003017995,0.000001095336,0.0001691357],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9624402,"threshold_uncertainty_score":0.227021,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2095257585","doi":"10.1186/1471-2229-11-52","title":"Association mapping of common bacterial blight resistance QTL in Ontario bean breeding populations","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":87,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Phaseolus; Single-nucleotide polymorphism; Association mapping; Quantitative trait locus; Population; Xanthomonas; Genetics; Genome-wide association study; Breeding program; Cultivar; Genotype; Horticulture; Gene","authors":[{"name":"Chun Shi","is_ca":true},{"name":"Alireza Navabi","is_ca":true},{"name":"Kangfu Yu","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08141910109412036,"gpt":0.2144543663714044,"spread":0.133035265277284,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003063915,0.00009456316,0.0002249919,0.00002955233,0.00007969751,0.000007766518,0.0001463669,0.0001725766,0.0002504095],"category_scores_gemma":[0.00002855301,0.00004168955,0.00005232817,0.0001333599,0.00001698348,0.00004775235,0.00003404029,0.00009706242,0.000005316746],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009021266,"about_ca_system_score_gemma":0.0000137165,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.01206998,"about_ca_topic_score_gemma":0.9086017,"domain_scores_codex":[0.9991083,0.00009782123,0.0002990472,0.0001913479,0.0000691866,0.0002343324],"domain_scores_gemma":[0.9995966,0.00008407116,0.0002251331,0.00003730057,0.00002352419,0.00003336008],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006181616,0.00004031741,0.4522569,0.000003021001,0.000003992397,0.000002650845,0.0001183033,1.664912e-7,0.5451443,0.002174664,0.0001054897,0.00008831201],"study_design_scores_gemma":[0.0001492205,0.00008386734,0.9848355,0.00004424846,0.000007625792,0.000003756531,0.00009303736,0.000005742623,0.006420881,0.00163412,0.006592134,0.0001298527],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968871,0.00003294285,0.00001543232,0.00004984855,0.0003568089,0.0001143825,0.0004042138,0.0000197699,0.00211954],"genre_scores_gemma":[0.9976391,0.000009568186,0.0009772968,0.00001936914,0.00007439815,0.000006480385,0.0006005921,5.9554e-7,0.0006726597],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8965317,"threshold_uncertainty_score":0.9945087,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2241869347","doi":"10.21273/jashs.130.1.18","title":"Differential Response of Common Bean Genotypes to High Temperature","year":2005,"lang":"en","type":"article","venue":"Journal of the American Society for Horticultural Science","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":87,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Phaseolus; Point of delivery; Horticulture; Biology; Genotype; Yield (engineering); Gene; Materials science; Genetics","authors":[{"name":"Katy Martin Rainey","is_ca":false},{"name":"Phillip D. Griffiths","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00906008129907499,"gpt":0.2316396872499644,"spread":0.2225796059508894,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005584338,0.0001129253,0.000278172,0.00000933597,0.0004192563,0.00006265556,0.0007938385,0.00002949142,0.00001399436],"category_scores_gemma":[0.00009952215,0.00003063487,0.0004850303,0.0007737152,0.0004197294,0.0001526337,0.0001035489,0.0001213588,8.769706e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008461338,"about_ca_system_score_gemma":0.00003405067,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003096329,"about_ca_topic_score_gemma":0.0001117652,"domain_scores_codex":[0.9986777,0.00004928996,0.0003206657,0.000152377,0.0005175027,0.0002824129],"domain_scores_gemma":[0.998843,0.0001286477,0.0005267689,0.00006893914,0.0002875206,0.0001450881],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002544439,0.00004768731,0.0002250112,0.000001614763,0.00001517009,3.266357e-7,0.0001882182,0.00006530721,0.9924854,0.00004302823,0.001133616,0.005540194],"study_design_scores_gemma":[0.0001568683,0.001019668,0.4025605,0.00004442256,0.00005441996,0.00004110998,0.001746211,0.00004795988,0.5902244,0.00006487517,0.00386971,0.0001697873],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931534,0.00003809677,0.000008116745,0.006365193,0.0001815687,0.0001609294,0.00008296212,0.000006343342,0.000003372753],"genre_scores_gemma":[0.996554,0.00002446646,0.002338191,0.000624716,0.0003055932,0.000002301922,0.000001219147,8.065635e-7,0.0001487083],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4023355,"threshold_uncertainty_score":0.3224623,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2102163542","doi":"10.1007/s10658-009-9547-7","title":"Pathogenicity of morphologically different isolates of Sclerotinia sclerotiorum with Brassica napus and B. juncea genotypes","year":2009,"lang":"en","type":"article","venue":"European Journal of Plant Pathology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":85,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"Australian Centre for International Agricultural Research","keywords":"Sclerotinia sclerotiorum; Biology; Brassica; Pathogen; Cotyledon; Sclerotinia; Genotype; Pathogenicity; Botany; Virulence; Veterinary medicine; Microbiology; Horticulture; Genetics; Gene","authors":[{"name":"Harsh Garg","is_ca":false},{"name":"Linda M. Kohn","is_ca":true},{"name":"Marion Andrew","is_ca":true},{"name":"Hua Li","is_ca":false},{"name":"K. Sivasithamparam","is_ca":false},{"name":"Martin J. Barbetti","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01205292523297392,"gpt":0.1703330917067071,"spread":0.1582801664737332,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006303549,0.0001804361,0.0004992294,0.00003749834,0.00007337669,0.00001250537,0.0002872545,0.00005937946,0.00004186068],"category_scores_gemma":[0.00004056936,0.00006117642,0.0001058144,0.0001173331,0.0001489896,0.00005589621,0.00004797208,0.0001976786,0.000001679296],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005707393,"about_ca_system_score_gemma":0.000008169221,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":9.322329e-7,"about_ca_topic_score_gemma":0.00001863926,"domain_scores_codex":[0.9984246,0.0003723375,0.0005743595,0.0002003776,0.0001854899,0.0002427587],"domain_scores_gemma":[0.9988323,0.0001075502,0.0007538251,0.00006335229,0.0001279992,0.0001149066],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003876417,0.0001687086,0.004190205,0.000007804759,0.00002009874,0.0006440832,0.00006018074,0.000008216623,0.9792511,0.0001957872,0.00003952007,0.01502663],"study_design_scores_gemma":[0.0004960052,0.006766901,0.9631537,0.0001592201,0.0000510167,0.001919948,0.00009562584,0.00001022559,0.0268118,0.0001640695,0.0002111399,0.0001603124],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998412,0.0005070604,0.000156333,0.0002570456,0.00008214506,0.00009766055,0.0002719047,0.00001032538,0.0002055339],"genre_scores_gemma":[0.998287,0.000416101,0.00106454,0.0001067234,0.00008698588,2.493175e-7,0.00001550201,0.000001716459,0.0000211486],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9589635,"threshold_uncertainty_score":0.2494702,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1511180720","doi":"10.1007/s00425-003-0988-5","title":"Two Brassica napus polygalacturonase inhibitory protein genes are expressed at different levels in response to biotic and abiotic stresses","year":2003,"lang":"en","type":"article","venue":"Planta","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":83,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Biology; Jasmonic acid; Biotic stress; Sclerotinia sclerotiorum; Gene; Salicylic acid; Abiotic component; Abiotic stress; Brassica; Botany; Gene family; Plant defense against herbivory; Pectinase; Brassica oleracea; Gene expression; Genetics; Biochemistry; Enzyme","authors":[{"name":"Rugang Li","is_ca":true},{"name":"Roger Rimmer","is_ca":true},{"name":"Min Yu","is_ca":true},{"name":"Andrew Sharpe","is_ca":true},{"name":"G. Séguin-Swartz","is_ca":true},{"name":"Derek J. Lydiate","is_ca":true},{"name":"Dwayne D. Hegedus","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02022953771885188,"gpt":0.210137939365075,"spread":0.1899084016462232,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001670101,0.0002074823,0.0002430748,0.00003579971,0.0001621363,0.00005761063,0.0001340621,0.00008483454,0.00009938118],"category_scores_gemma":[0.00008739599,0.00008203355,0.00003824078,0.0001479253,0.00003484532,0.00004698194,0.00007304169,0.00008984019,0.00001633579],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000470402,"about_ca_system_score_gemma":0.0000077578,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004546189,"about_ca_topic_score_gemma":0.003055496,"domain_scores_codex":[0.9986083,0.0002488378,0.0001991515,0.0003985193,0.0001900857,0.0003551402],"domain_scores_gemma":[0.9994144,0.0002391248,0.0000746575,0.00007638468,0.00001439742,0.0001810719],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003543003,0.00008424481,0.006600392,0.00001758824,0.000004574892,0.0001201316,0.00005003369,0.000002565683,0.9915936,0.00003917769,0.00007293063,0.001060478],"study_design_scores_gemma":[0.0003263549,0.0001817062,0.322549,0.0001867594,0.000006552195,0.00002955887,0.0001970311,0.000007262313,0.6739643,0.00008249774,0.002205135,0.0002639517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977884,0.0005021036,0.000001237498,0.0005085265,0.00009139268,0.0003743823,0.0006473346,0.00003412691,0.00005246771],"genre_scores_gemma":[0.9991279,0.0000386379,0.00005438366,0.0001153603,0.00005245826,0.00002085115,0.00002353642,0.000001996371,0.0005648995],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3176293,"threshold_uncertainty_score":0.3345231,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1976637530","doi":"10.1016/j.fgb.2004.03.001","title":"Interaction of Sclerotinia sclerotiorum with a resistant Brassica napus cultivar: expressed sequence tag analysis identifies genes associated with fungal pathogenesis","year":2004,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":82,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Saskatchewan Canola Development Commission; Ministry of Agriculture - Saskatchewan","keywords":"Sclerotinia sclerotiorum; Biology; Sclerotinia; Gene; Genetics; Expressed sequence tag; Brassica; cDNA library; Ascomycota; Complementary DNA; Botany","authors":[{"name":"Rugang Li","is_ca":true},{"name":"Roger Rimmer","is_ca":true},{"name":"L. Buchwaldt","is_ca":true},{"name":"Andrew Sharpe","is_ca":true},{"name":"G. Séguin-Swartz","is_ca":true},{"name":"Cathy Coutu","is_ca":true},{"name":"Dwayne D. Hegedus","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03356878102116834,"gpt":0.2343532084948701,"spread":0.2007844274737018,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002086043,0.0002474021,0.0004328386,0.00006048587,0.0002520379,0.00005911385,0.000191574,0.000180255,0.00003966553],"category_scores_gemma":[0.00002180404,0.00009529249,0.0001038317,0.0006821021,0.0002159852,0.00005716498,0.00006750024,0.0001064193,0.000001440397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002934393,"about_ca_system_score_gemma":0.00002680926,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001631096,"about_ca_topic_score_gemma":0.005628787,"domain_scores_codex":[0.9984972,0.0001221115,0.0003246253,0.0005118308,0.0001780476,0.0003661436],"domain_scores_gemma":[0.9991706,0.00009931563,0.0003172698,0.0001051333,0.0001968257,0.0001108264],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002596772,0.0001063663,0.04432291,0.00000877285,0.0002794414,0.00001855561,0.00004377366,0.0001864925,0.9519978,0.0001601035,0.000003450448,0.002612674],"study_design_scores_gemma":[0.0006982246,0.002303964,0.7208784,0.0001669285,0.0005337996,0.00003001067,0.0005370934,0.0001398326,0.2734502,0.000341962,0.0004173788,0.0005022619],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977975,0.0006125075,0.0001712068,0.0001700607,0.0000690119,0.0002138966,0.0008845499,0.00003658003,0.00004466766],"genre_scores_gemma":[0.9984773,0.0004997269,0.0005924082,0.00004000548,0.00006068357,0.00003225473,0.0002299437,0.00000299136,0.00006466123],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6785476,"threshold_uncertainty_score":0.3885915,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2071876335","doi":"10.1111/j.1364-3703.2009.00571.x","title":"Expression and regulation of <i>Sclerotinia sclerotiorum</i> necrosis and ethylene‐inducing peptides (NEPs)","year":2009,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":82,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Saskatchewan Canola Development Commission; Ministry of Agriculture - Saskatchewan","keywords":"Sclerotinia sclerotiorum; Biology; Necrosis; Gene; Microbiology; Tumor necrosis factor alpha; Gene expression; Host (biology); Virulence; Programmed cell death; Cell biology; Biochemistry; Botany; Genetics; Immunology; Apoptosis","authors":[{"name":"Zafer Dallal Bashi","is_ca":true},{"name":"Dwayne D. Hegedus","is_ca":true},{"name":"L. Buchwaldt","is_ca":true},{"name":"S. R. Rimmer","is_ca":true},{"name":"M. Hossein Borhan","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01110932400327722,"gpt":0.1886787334187401,"spread":0.1775694094154629,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002221312,0.0001334292,0.000217679,0.00002173468,0.0001249584,0.00002184265,0.00007850963,0.0001556387,0.00001277478],"category_scores_gemma":[0.000021805,0.00006037757,0.00003812834,0.00009374641,0.00005723553,0.00005628244,0.00004368498,0.00008514745,0.000001097163],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003930031,"about_ca_system_score_gemma":0.000003249472,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008185115,"about_ca_topic_score_gemma":0.00003016203,"domain_scores_codex":[0.9990667,0.00009191354,0.0002012678,0.0003128451,0.000118753,0.0002085126],"domain_scores_gemma":[0.9996752,0.00005066963,0.0001181771,0.00005884199,0.00002779768,0.0000693527],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002954023,0.00002630098,0.0004079741,0.000006899304,0.000002200089,0.00003623587,0.00004971282,0.000005582249,0.989612,0.0005868107,0.00002809047,0.009208684],"study_design_scores_gemma":[0.0001643144,0.0003034904,0.2325167,0.00009433052,0.00001211676,0.0001448374,0.00005494224,0.0000570571,0.7652439,0.001178443,0.00008936287,0.0001404965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986422,0.0004328461,0.0001398507,0.0003093894,0.00003843904,0.000144508,0.00009737282,0.00002887732,0.0001664886],"genre_scores_gemma":[0.9983977,0.0001968585,0.001037064,0.0002280993,0.00002684316,0.00000407448,0.00007711745,0.000001052862,0.00003118338],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2321087,"threshold_uncertainty_score":0.2462126,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2094832223","doi":"10.1111/j.1744-7909.2005.00077.x","title":"Analysis of the Genetic Structure of <i>Sclerotinia sclerotiorum</i> (Lib.) de Bary Populations from Different Regions and Host Plants by Random Amplified Polymorphic DNA Markers","year":2005,"lang":"en","type":"article","venue":"Journal of Integrative Plant Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":81,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Biology; RAPD; Sclerotinia sclerotiorum; UPGMA; Genetic diversity; Sclerotinia; Population; Genetic distance; Botany; Phylogenetic tree; Veterinary medicine; Genetic variation; Genetics; Gene","authors":[{"name":"Junming Sun","is_ca":false},{"name":"Witold Irzykowski","is_ca":false},{"name":"M. Jędryczka","is_ca":false},{"name":"Fen-Xia Han","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0151768459133097,"gpt":0.2091667171926194,"spread":0.1939898712793097,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001054872,0.0001629399,0.0005540586,0.00005833239,0.0001083155,0.00001128992,0.0002592378,0.000144613,0.0001220992],"category_scores_gemma":[0.00005016141,0.00004770215,0.0002329431,0.0002119922,0.0001436646,0.00003505685,0.00003585194,0.0001957361,1.350759e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002402403,"about_ca_system_score_gemma":0.00001593048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002311221,"about_ca_topic_score_gemma":0.005685848,"domain_scores_codex":[0.9987564,0.0002763354,0.0005157492,0.0001511256,0.0001284874,0.0001718733],"domain_scores_gemma":[0.9987243,0.0003677558,0.0006952753,0.00005923693,0.0000738318,0.00007964268],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003035123,0.00004798294,0.07134413,0.000001427464,0.0003391149,0.000001324225,0.0001084563,0.00001585352,0.9266192,0.0001316362,0.0002744688,0.0008128374],"study_design_scores_gemma":[0.0004368782,0.0002277227,0.920321,0.0001015027,0.0003563002,0.000037104,0.0005381573,0.0002334396,0.07693823,0.000544297,0.0001566603,0.0001086382],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991737,0.0007752574,0.0002173251,0.0006886726,0.00009056034,0.0001141537,0.006361703,0.000003103926,0.00001221424],"genre_scores_gemma":[0.9988177,0.0005142542,0.0002721189,0.0001293545,0.00006939898,0.000001124208,0.0001784209,0.000001008574,0.00001656305],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.849681,"threshold_uncertainty_score":0.3172837,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2028753932","doi":"10.1139/g01-124","title":"A molecular linkage map of tomato displaying chromosomal locations of resistance gene analogs based on a<i>Lycopersicon esculentum</i>×<i>Lycopersicon hirsutum</i>cross","year":2002,"lang":"en","type":"article","venue":"Genome","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false},"ca_institutions":"","funders":"","keywords":"Lycopersicon; Biology; Genetics; Restriction fragment length polymorphism; Population; Locus (genetics); Genetic linkage; Gene; Gene mapping; Chromosome; Molecular biology; Botany; Polymerase chain reaction","authors":[{"name":"L P Zhang","is_ca":false},{"name":"Aftab Ahmad Khan","is_ca":false},{"name":"David Niño-Liu","is_ca":false},{"name":"Majid R. Foolad","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01253769543481254,"gpt":0.1943060298333208,"spread":0.1817683343985083,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001980903,0.0002294076,0.0003604974,0.00004050916,0.0002055461,0.00003395287,0.000408386,0.0001393751,0.00044387],"category_scores_gemma":[0.00001972455,0.0001128331,0.0002274064,0.000360916,0.0001260076,0.00007616713,0.00005281601,0.0001208701,0.00005258638],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004859063,"about_ca_system_score_gemma":0.00001188585,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002669025,"about_ca_topic_score_gemma":0.000108911,"domain_scores_codex":[0.9982966,0.00008780858,0.0004176506,0.0004372817,0.0003798977,0.0003808107],"domain_scores_gemma":[0.9992302,0.00008682792,0.0002391654,0.0002066966,0.0001117324,0.0001253442],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000497479,0.0002008627,0.000290845,0.00007170742,0.00002252566,0.00004208844,0.000074064,0.0008107071,0.9977829,0.0003288366,0.00006094696,0.0002647674],"study_design_scores_gemma":[0.001658831,0.001321686,0.04930882,0.0005943819,0.0001616922,0.00002169368,0.000582536,0.005492178,0.9270387,0.0002152906,0.012317,0.001287165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951824,0.001469293,0.0001486165,0.0004341418,0.0001185495,0.0002929363,0.0008462569,0.00004025071,0.001467531],"genre_scores_gemma":[0.9984335,0.00006139118,0.0004235773,0.000227872,0.00006977658,0.00001864455,0.0001592707,0.000003840284,0.0006021353],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07074417,"threshold_uncertainty_score":0.4860066,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}