{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":1910,"total_is_capped":false,"direct_labels_cover":3,"predictions_cover":1910,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"2df90ae78245","filters":{"topic":"Reproductive tract infections research"}},"results":[{"id":"W2024213191","doi":"10.1016/s0140-6736(02)11079-8","title":"Effectiveness of COL-1492, a nonoxynol-9 vaginal gel, on HIV-1 transmission in female sex workers: a randomised controlled trial","year":2002,"lang":"en","type":"article","venue":"The Lancet","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":795,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval","funders":"","keywords":"Medicine; Placebo; Vaginal microbicide; Microbicide; Spermicide; Gynecology; Microbicides for sexually transmitted diseases; Hazard ratio; Chlamydia trachomatis; Population; Obstetrics; Family planning; Internal medicine; Human immunodeficiency virus (HIV); Immunology; Confidence interval; Research methodology; Health services","retraction":null,"screen_n_in":null,"score":{"opus":0.03490841456764004,"gpt":0.3044823650573361,"spread":0.269573950489696,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002523307,0.000171264,0.0009510638,0.000168132,0.0001214532,0.00001397798,0.000318456,0.0001591899,0.0007554709],"category_scores_gemma":[0.0004542079,0.000105972,0.0001686236,0.000295163,0.0002687695,0.00005768852,0.00002564847,0.00059128,0.0002905921],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006825505,"about_ca_system_score_gemma":0.00004025507,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007002995,"about_ca_topic_score_gemma":0.000003557892,"domain_scores_codex":[0.9963246,0.002544917,0.0003449743,0.0003263163,0.00007861586,0.0003806012],"domain_scores_gemma":[0.9967474,0.002498244,0.0001126772,0.0005609115,0.00006344613,0.0000173151],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.8492327,0.001244547,0.002705842,0.00007887695,0.0003551846,0.000006956455,0.0006971937,0.0002442792,0.1407735,0.0001028901,0.001517823,0.00304017],"study_design_scores_gemma":[0.9291953,0.001101723,0.00960223,0.000208833,0.00005586113,0.00001901416,0.00009861374,0.00007175317,0.05647637,0.0001193793,0.002903359,0.0001475208],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985619,0.00105808,0.0001952004,0.0006053768,0.0002878146,0.004013897,0.00001291707,0.00004239985,0.008165317],"genre_scores_gemma":[0.9969697,0.0001145404,0.00001740752,0.00002203906,0.0001286048,0.0006699236,0.00001068421,0.00001481001,0.002052289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08429717,"threshold_uncertainty_score":0.8271877,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2108487398","doi":"10.1086/503780","title":"High Recurrence Rates of Bacterial Vaginosis over the Course of 12 Months after Oral Metronidazole Therapy and Factors Associated with Recurrence","year":2006,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":771,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal Ottawa Mental Health Centre; Institute of Population and Public Health","funders":"","keywords":"Bacterial vaginosis; Vaginal flora; Medicine; Metronidazole; Confidence interval; Sexual transmission; Vagina; Internal medicine; Gynecology; Surgery; Antibiotics; Immunology; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.01745024329749468,"gpt":0.2760906771509531,"spread":0.2586404338534585,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005680738,0.0001712912,0.0003642865,0.0001267149,0.0001590902,0.00002138727,0.0002025364,0.00007136288,0.0002712911],"category_scores_gemma":[0.000296193,0.00008076207,0.0001078334,0.0002663814,0.0008532004,0.0002068878,0.00004070635,0.000336885,0.000001260964],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005082261,"about_ca_system_score_gemma":0.0001627614,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006584277,"about_ca_topic_score_gemma":0.0001842384,"domain_scores_codex":[0.9983792,0.0007856479,0.0003844117,0.0001225272,0.0001154584,0.0002127687],"domain_scores_gemma":[0.9976993,0.000919514,0.0006271666,0.0002431047,0.0004878369,0.00002313225],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001433273,0.001048753,0.9660726,0.00001135429,0.0008240428,0.000001147898,0.0003455775,0.0001195774,0.0278579,0.00004270684,0.0006431246,0.001599937],"study_design_scores_gemma":[0.001318332,0.001008744,0.9415659,0.00006926082,0.0002041407,0.00002367737,0.0001499837,9.337948e-7,0.05511676,0.0003153469,0.0001379371,0.00008903698],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926124,0.006541808,0.00002217771,0.00006379934,0.0003516128,0.000233158,0.0001357652,0.000009083844,0.00003018064],"genre_scores_gemma":[0.9991117,0.0007706869,0.000002083003,0.000007180612,0.00005046537,0.000008714679,0.00001278654,0.00001148169,0.00002490267],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02725886,"threshold_uncertainty_score":0.3293382,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2725319213","doi":"10.1371/journal.pmed.1002344","title":"Antimicrobial resistance in Neisseria gonorrhoeae: Global surveillance and a call for international collaborative action","year":2017,"lang":"en","type":"article","venue":"PLoS Medicine","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":626,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Neisseria gonorrhoeae; Antibiotic resistance; Call to action; Antimicrobial; Global health; Drug resistance; Medicine; Microbiology; Gonorrhea; Action (physics); Biology; Virology; Public health; Antibiotics; Business; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.03711667611805761,"gpt":0.3627391284266109,"spread":0.3256224523085533,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003741953,0.0001032408,0.0002188761,0.00007275422,0.0002523777,0.00002492679,0.0001956919,0.0001002676,0.00007286233],"category_scores_gemma":[0.003084641,0.00008908696,0.00001586351,0.00009096015,0.000463384,0.0001700118,0.00005534474,0.0001633165,0.00001994588],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001307712,"about_ca_system_score_gemma":0.00007459041,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002633334,"about_ca_topic_score_gemma":0.003116144,"domain_scores_codex":[0.9991751,0.00008922509,0.0001919657,0.0003234889,0.00002193236,0.0001982321],"domain_scores_gemma":[0.9990032,0.0001369104,0.0001397566,0.0002960455,0.0004062064,0.0000178746],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002871965,0.0003262128,0.3282791,0.0001130991,0.000313805,0.000004424774,0.0005736452,0.000002506667,0.6338559,0.001747568,0.0271889,0.004722838],"study_design_scores_gemma":[0.004763717,0.0002104888,0.9070013,0.00016076,0.00001663669,0.00002921859,0.0001641376,0.0000123848,0.01220332,0.0005533954,0.07471938,0.0001653055],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9802582,0.001061949,0.0001355096,0.01111784,0.001846855,0.0006178633,0.0001259018,0.0000274727,0.004808359],"genre_scores_gemma":[0.9970871,0.0003619465,0.000132865,0.00004657686,0.0002043612,0.00006123302,0.0000672989,0.000007345438,0.002031295],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6216526,"threshold_uncertainty_score":0.3692826,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2061203889","doi":"10.1038/nri1551","title":"Immunology of Chlamydia infection: implications for a Chlamydia trachomatis vaccine","year":2005,"lang":"en","type":"review","venue":"Nature reviews. Immunology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":622,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"Canadian Institutes of Health Research","keywords":"Chlamydia trachomatis; Chlamydia; Immunology; Chlamydia trachomatis infection; Immunity; Immune system; Sexually transmitted disease; Biology; Chlamydial infection; Virology; Chlamydiaceae; Chlamydiales; Medicine; Human immunodeficiency virus (HIV)","retraction":null,"screen_n_in":null,"score":{"opus":0.05585278283302048,"gpt":0.4169202543261654,"spread":0.3610674714931449,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.001927568,0.001357646,0.006718886,0.001761794,0.000514599,0.00003303124,0.001513192,0.006550994,0.001385584],"category_scores_gemma":[0.003202941,0.001113605,0.002608167,0.001966561,0.0007088162,0.0002863806,0.0004050443,0.006159447,0.001854536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006112402,"about_ca_system_score_gemma":0.0008473399,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007993071,"about_ca_topic_score_gemma":0.00007426731,"domain_scores_codex":[0.9912552,0.002244015,0.003320249,0.001761586,0.00008106973,0.001337884],"domain_scores_gemma":[0.9913374,0.001910707,0.002608557,0.003116962,0.0009687718,0.00005761384],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005949968,0.0006020072,0.00007606907,0.006072165,0.00328294,9.746242e-7,0.00003989827,3.031517e-7,0.001222797,0.005788087,0.01028138,0.9725739],"study_design_scores_gemma":[0.001137481,0.0003474867,0.003205314,0.003203976,0.00159496,0.001756969,0.000004281313,7.708343e-8,0.0001893828,0.0002424826,0.9875782,0.0007394342],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00005414995,0.9864291,0.0003103552,0.0003388007,0.003099027,0.007812157,0.0005742557,0.0002298414,0.001152337],"genre_scores_gemma":[0.00007027198,0.9879957,0.0005800481,0.00005772229,0.0005850705,0.005651563,0.00238958,0.0002012877,0.002468745],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9772968,"threshold_uncertainty_score":0.9999174,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2142972284","doi":"10.1093/schbul/sbj052","title":"Prenatal Infection as a Risk Factor for Schizophrenia","year":2006,"lang":"en","type":"article","venue":"Schizophrenia Bulletin","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":537,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Columbia College","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Mental Health","keywords":"Schizophrenia (object-oriented programming); Etiology; Rubella; Toxoplasmosis; Immunology; Medicine; Pregnancy; Psychiatry; Vaccination; Measles; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.01066539283452112,"gpt":0.2613525922557919,"spread":0.2506871994212708,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005048694,0.0003691792,0.0003732241,0.0003935665,0.0007442472,0.00008940126,0.0002677994,0.0004063691,0.00588767],"category_scores_gemma":[0.00106678,0.0003441103,0.0003023405,0.0003331737,0.0003045011,0.0001246901,0.0001182744,0.0008395555,0.0099897],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001309018,"about_ca_system_score_gemma":0.0001652035,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002815638,"about_ca_topic_score_gemma":0.0002308004,"domain_scores_codex":[0.9974387,0.0003661511,0.0004813295,0.0008613551,0.0001091468,0.0007432856],"domain_scores_gemma":[0.9982806,0.0004382891,0.0002354539,0.0006788998,0.0003174117,0.00004933171],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.02991874,0.003464039,0.04296267,0.0004253555,0.001799137,0.00003034539,0.000356179,0.0005570501,0.476893,0.03050957,0.1394182,0.2736657],"study_design_scores_gemma":[0.008287173,0.0008456224,0.2015563,0.00006475188,0.0001112191,0.0002715035,0.00001881874,0.000007511612,0.2693867,0.005881914,0.5128139,0.0007545917],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901342,0.001125611,0.001228682,0.0007914869,0.001458593,0.001313034,0.0005407464,0.0004553025,0.002952302],"genre_scores_gemma":[0.9870503,0.0000681533,0.001461991,0.00003244376,0.0005697613,0.0004109044,0.0002279185,0.00007038805,0.01010814],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3733956,"threshold_uncertainty_score":0.9999011,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2112848787","doi":"10.1086/322632","title":"Standardizing<i>Chlamydia pneumoniae</i>Assays: Recommendations from the Centers for Disease Control and Prevention (USA) and the Laboratory Centre for Disease Control (Canada)","year":2001,"lang":"en","type":"review","venue":"Clinical Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":528,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Health Canada","funders":"","keywords":"Chlamydia; Medicine; Chlamydiales; Serology; Gold standard (test); Chlamydophila pneumoniae; Chlamydiaceae; Polymerase chain reaction; Immunology; Antibody; Disease; Pathology; Internal medicine; Biology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.04401035310041563,"gpt":0.3787199634319513,"spread":0.3347096103315357,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.001577122,0.0005958487,0.001736227,0.00009216846,0.001326899,0.0002004324,0.0003603138,0.0003104476,0.0001466105],"category_scores_gemma":[0.008690502,0.0003692803,0.001031184,0.0002455606,0.001502383,0.0001692864,0.0001221791,0.0008108735,0.00001369952],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000237943,"about_ca_system_score_gemma":0.002359482,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001338237,"about_ca_topic_score_gemma":0.006978257,"domain_scores_codex":[0.9933502,0.003527806,0.001237149,0.00112735,0.0001384063,0.0006190715],"domain_scores_gemma":[0.9751937,0.02221652,0.0007550397,0.0009278625,0.0005556059,0.0003512817],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003925097,0.001718497,0.1157389,0.002815823,0.008400617,0.00001328941,0.0000331043,0.000008208563,0.000002143439,0.001314288,0.1293231,0.7367069],"study_design_scores_gemma":[0.00942196,0.000154354,0.01243503,0.001190491,0.007640225,0.000003601464,0.00004032475,0.000022579,1.192894e-7,0.00151897,0.9671663,0.0004060509],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0006703127,0.9421791,0.00216652,0.005229903,0.001938401,0.009087757,0.03861335,0.00008931562,0.00002526824],"genre_scores_gemma":[0.01894016,0.9729964,0.000005026735,0.0008749741,0.0007435128,0.003423593,0.002347976,0.00009307503,0.0005753471],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8378432,"threshold_uncertainty_score":0.9999732,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4210955077","doi":"10.1038/s41572-019-0128-6","title":"Gonorrhoea","year":2019,"lang":"en","type":"review","venue":"Nature Reviews Disease Primers","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":512,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"Universitetssjukhuset Örebro; Örebro Universitet","keywords":"Neisseria gonorrhoeae; Medicine; Azithromycin; Urethritis; Antibiotic resistance; Cervicitis; Gonorrhea; Intensive care medicine; Men who have sex with men; Gynecology; Antibiotics; Virology; Internal medicine; Microbiology; Syphilis; Biology; Human immunodeficiency virus (HIV)","retraction":null,"screen_n_in":null,"score":{"opus":0.08112977939835415,"gpt":0.4244362961860483,"spread":0.3433065167876942,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.001012343,0.0008469832,0.003278874,0.0005308885,0.0001785938,0.00004456766,0.0009378063,0.001606786,0.002644059],"category_scores_gemma":[0.001594659,0.0005949121,0.002182161,0.0008627958,0.000242971,0.0001530246,0.0002710114,0.004595529,0.05494431],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003861076,"about_ca_system_score_gemma":0.001233332,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006162824,"about_ca_topic_score_gemma":5.10433e-7,"domain_scores_codex":[0.9950022,0.001812029,0.0009816589,0.001385116,0.00009704748,0.00072202],"domain_scores_gemma":[0.9964715,0.0003828133,0.0006245631,0.002229966,0.0001520321,0.0001391328],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001606274,0.0001530785,0.000006926789,0.02791982,0.0005779028,0.000005767947,0.000003926394,6.840845e-8,0.000004937205,0.0003479221,0.03110257,0.939861],"study_design_scores_gemma":[0.0001638196,0.0000302294,0.00001885211,0.008804102,0.002599462,0.00005423601,0.000001277856,2.354943e-8,0.000002992957,0.00001321704,0.987747,0.0005647904],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[5.239135e-7,0.9874706,0.000004940777,0.00004807904,0.002950187,0.004970465,0.0001833085,0.0001242096,0.004247688],"genre_scores_gemma":[0.000001332814,0.9826342,0.00004286825,0.00009273305,0.0002132851,0.0006690412,0.001520767,0.0001143821,0.01471139],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9566444,"threshold_uncertainty_score":0.9996893,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2149188810","doi":"10.1016/s0928-8244(02)00465-0","title":"Oral use of<i>Lactobacillus rhamnosus</i>GR-1 and<i>L. fermentum</i>RC-14 significantly alters vaginal flora: randomized, placebo-controlled trial in 64 healthy women","year":2003,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":508,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lawson Health Research Institute","funders":"Procter and Gamble","keywords":"Lactobacillus fermentum; Lactobacillus rhamnosus; Probiotic; Lactobacillus; Placebo; Bacterial vaginosis; Biology; Vaginal flora; Microbiology; Asymptomatic; Vagina; Internal medicine; Medicine; Bacteria; Food science; Fermentation; Lactic acid; Lactobacillus plantarum","retraction":null,"screen_n_in":null,"score":{"opus":0.01851693208225166,"gpt":0.2780471961724552,"spread":0.2595302640902036,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.007535011,0.0007365431,0.00362322,0.001050978,0.0003120038,0.00003113716,0.0006652193,0.001815089,0.002393659],"category_scores_gemma":[0.0117962,0.000596899,0.0004201985,0.0006447319,0.006159721,0.0002372758,0.0003172993,0.002714478,0.0003302542],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004564735,"about_ca_system_score_gemma":0.001213708,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006885066,"about_ca_topic_score_gemma":0.0001475051,"domain_scores_codex":[0.9834397,0.01063732,0.002267844,0.001446569,0.0001412617,0.002067264],"domain_scores_gemma":[0.9924632,0.005418398,0.0006741629,0.000938891,0.0003130194,0.0001923772],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.746304,0.001518429,0.0006743469,0.00003864592,0.001837114,0.0000663465,0.0007886786,0.000005977315,0.2436138,0.001720192,0.0009440416,0.002488388],"study_design_scores_gemma":[0.9526213,0.003526608,0.0003546384,0.00006279473,0.0001284399,0.001456868,0.0004620235,0.000005182221,0.01012843,0.0005561698,0.03011792,0.0005796656],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9824675,0.005186575,0.000215893,0.001438674,0.005003166,0.005105066,0.0000604189,0.0001102837,0.000412389],"genre_scores_gemma":[0.993305,0.002507164,0.0001646661,0.0007254956,0.00008557492,0.001625556,0.0001805073,0.00006273598,0.001343281],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2334854,"threshold_uncertainty_score":0.9996482,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2559683962","doi":"10.1016/j.tim.2016.11.007","title":"Lactobacillus iners : Friend or Foe?","year":2016,"lang":"en","type":"review","venue":"Trends in Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":461,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Biology; Dysbiosis; Microbiology; Metagenomics; Bacterial vaginosis; Lactobacillus; Gardnerella vaginalis; Whole genome sequencing; Genome; Genetics; Microbiome; Gene; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.08520265691531438,"gpt":0.4002956995719063,"spread":0.3150930426565919,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000778831,0.0008306506,0.002682892,0.002474474,0.0001455864,0.00001927907,0.0009479938,0.001977896,0.01582681],"category_scores_gemma":[0.0004262878,0.0004967758,0.0006007988,0.001377402,0.001065389,0.0001071497,0.0004324714,0.001772224,0.01039779],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005940483,"about_ca_system_score_gemma":0.0004704281,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008104907,"about_ca_topic_score_gemma":0.0002413182,"domain_scores_codex":[0.9943738,0.001676314,0.001158967,0.001474076,0.00002759522,0.00128922],"domain_scores_gemma":[0.9972031,0.0009566089,0.0004217676,0.001276088,0.00009817875,0.00004429123],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009713251,0.0001998621,0.00001796828,0.0006124785,0.0005208775,0.00005919013,0.0000537281,9.621399e-8,0.002967436,0.0002007638,0.01499569,0.9802748],"study_design_scores_gemma":[0.0008892384,0.0002787953,0.00001616709,0.001717555,0.0001315806,0.002211552,0.00001548009,6.543361e-9,0.0001766992,0.00002064078,0.9939494,0.0005929334],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0000711127,0.9872827,0.00001039478,0.0001150609,0.002186037,0.0005159671,0.0006756596,0.0001370077,0.009006057],"genre_scores_gemma":[0.00009080776,0.9310485,0.0000387693,0.00002039705,0.0001482383,0.0002732219,0.001383951,0.00009552256,0.06690066],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9796818,"threshold_uncertainty_score":0.9997484,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2130187365","doi":"10.1111/j.1574-695x.2001.tb01549.x","title":"Oral probiotics can resolve urogenital infections","year":2001,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":451,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Bacterial vaginosis; Lactobacillus rhamnosus; Vagina; Lactobacillus fermentum; Probiotic; Lactobacillus; Vaginitis; Biology; Asymptomatic; Genitourinary system; Microbiology; Internal medicine; Medicine; Gynecology; Bacteria; Lactic acid","retraction":null,"screen_n_in":null,"score":{"opus":0.0179326109787327,"gpt":0.2879305458359921,"spread":0.2699979348572594,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.001095879,0.0005238724,0.0008262757,0.0006521675,0.0007325513,0.00002786375,0.0009572371,0.001954334,0.00948889],"category_scores_gemma":[0.002474391,0.0004669949,0.0003023449,0.0008919362,0.003827663,0.0001313661,0.0006000974,0.002769865,0.006046515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002929443,"about_ca_system_score_gemma":0.0007211436,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008287469,"about_ca_topic_score_gemma":0.0009772688,"domain_scores_codex":[0.99493,0.001321049,0.0008781519,0.001142577,0.00008046464,0.001647701],"domain_scores_gemma":[0.9975007,0.0006565969,0.0002176945,0.001089489,0.0003995433,0.0001359365],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004143718,0.001614959,0.01489922,0.00001284211,0.001490891,0.0002047224,0.0003785393,0.000004987988,0.9483088,0.002175722,0.01180618,0.01868879],"study_design_scores_gemma":[0.004174942,0.002745894,0.01263354,0.00005042008,0.0001371067,0.03357134,0.0004119935,0.000003545385,0.08295809,0.0006471881,0.8618251,0.0008408073],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9764416,0.005213325,0.0007222152,0.006258011,0.005305639,0.0008770318,0.0001165219,0.0005806506,0.004484997],"genre_scores_gemma":[0.9891843,0.0008921569,0.0001492688,0.0007388108,0.0002416474,0.0001586714,0.0008384185,0.00007514039,0.007721538],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8653507,"threshold_uncertainty_score":0.9997782,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994566416","doi":"10.1056/nejmoa0707957","title":"Lack of Effectiveness of Cellulose Sulfate Gel for the Prevention of Vaginal HIV Transmission","year":2008,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":438,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; Centre hospitalier universitaire de Québec","funders":"","keywords":"Medicine; Placebo; Hazard ratio; Interim analysis; Internal medicine; Randomized controlled trial; Immunology; Surgery; Confidence interval; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.05421436978979578,"gpt":0.3444349244532892,"spread":0.2902205546634934,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002486857,0.00008216249,0.0004224958,0.000177504,0.00004990135,5.117308e-7,0.0001505438,0.00007334235,0.0001471391],"category_scores_gemma":[0.000408378,0.00004423889,0.0001199043,0.0001530502,0.0004138328,0.00005853557,0.00001011659,0.0002713676,0.000001206058],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001748863,"about_ca_system_score_gemma":0.000173982,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008419321,"about_ca_topic_score_gemma":0.000001582739,"domain_scores_codex":[0.9987017,0.0004661636,0.0005201414,0.0000896253,0.0001077427,0.0001146166],"domain_scores_gemma":[0.9975334,0.001341708,0.000426268,0.0001502371,0.0005240031,0.00002438751],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005151223,0.0002614508,0.00510744,0.0002830043,0.0003199248,0.000003491718,0.0007913057,0.0001071996,0.9438101,0.0001371676,0.0006205217,0.04340718],"study_design_scores_gemma":[0.03077715,0.004395027,0.06558725,0.0007106471,0.0002115499,0.0007403354,0.00009599267,0.000008280238,0.8847637,0.0008109093,0.01184979,0.00004942402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9626532,0.006660968,0.02919026,0.0006336667,0.0003527858,0.00031472,0.00000448009,0.000002349811,0.0001875856],"genre_scores_gemma":[0.9977258,0.001102505,0.0001427838,0.000002595125,0.0001880602,0.000002196107,0.000007288601,0.000006997976,0.0008218027],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06047982,"threshold_uncertainty_score":0.180401,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2105053076","doi":"10.1093/cid/civ298","title":"Genital Inflammation and the Risk of HIV Acquisition in Women","year":2015,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":431,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Wellcome Trust; Gilead Sciences","keywords":"Medicine; Immunology; Macrophage inflammatory protein; Chemokine; Cytokine; Inflammation; Sex organ; Proinflammatory cytokine; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.02728586813066732,"gpt":0.3392875296963991,"spread":0.3120016615657318,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001718965,0.00008675265,0.0002664267,0.000114546,0.00008032899,0.00001487195,0.00007915301,0.0001200868,0.00009272177],"category_scores_gemma":[0.005055379,0.0000588301,0.00008258053,0.0001966742,0.001052335,0.0001422307,0.00008418084,0.0003158616,0.0001620327],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006266015,"about_ca_system_score_gemma":0.00009762088,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009181036,"about_ca_topic_score_gemma":0.0000180997,"domain_scores_codex":[0.9977677,0.00134729,0.0004399265,0.0002222214,0.00004519057,0.0001776044],"domain_scores_gemma":[0.9979922,0.001349143,0.0001669481,0.0002638828,0.000181023,0.00004679224],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008052415,0.0004134571,0.984324,0.00001228868,0.0001655094,0.000001344905,0.0004320448,0.0001042906,0.0003665458,0.0007636576,0.0004666418,0.01214493],"study_design_scores_gemma":[0.005775345,0.0003385638,0.9816495,0.00001097788,0.0000538785,0.00000960151,0.0003308113,0.00003086904,0.0003878021,0.01036206,0.0009695472,0.00008100166],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969601,0.00116429,0.00007356349,0.0002044569,0.0003002187,0.000350298,0.00002842816,0.00004198989,0.0008766791],"genre_scores_gemma":[0.9992616,0.0003589454,0.00000204563,0.00002383852,0.00009299848,0.00009160014,0.00002000251,0.000007037303,0.0001419412],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01206393,"threshold_uncertainty_score":0.6052126,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2619565046","doi":"10.1126/science.aai9383","title":"Vaginal bacteria modify HIV tenofovir microbicide efficacy in African women","year":2017,"lang":"en","type":"article","venue":"Science","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":416,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Canadian Institutes of Health Research; Public Health Agency; Department of Science and Technology, Ministry of Science and Technology, India; University of Washington; National Research Foundation; Public Health Agency of Canada; National Institute of Allergy and Infectious Diseases; Manitoba Health Research Council; National Institute of Diabetes and Digestive and Kidney Diseases; United States Agency for International Development","keywords":"Microbicide; Bacterial vaginosis; Gardnerella vaginalis; Lactobacillus; Microbicides for sexually transmitted diseases; Microbiology; Bacteria; Anaerobic bacteria; Tenofovir; Lactobacillus crispatus; Human immunodeficiency virus (HIV); Vagina; Medicine; Biology; Virology; Population; Surgery; Environmental health","retraction":null,"screen_n_in":null,"score":{"opus":0.02526190505639451,"gpt":0.320758053624403,"spread":0.2954961485680085,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00142298,0.0001126082,0.0001637988,0.0003337503,0.000971209,0.0001649367,0.0011936,0.00006814161,0.0005225345],"category_scores_gemma":[0.001007275,0.00009746101,0.00002655055,0.0003248566,0.002805632,0.0005387664,0.0003570813,0.0003676893,0.001343254],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002722836,"about_ca_system_score_gemma":0.0003194687,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002149594,"about_ca_topic_score_gemma":0.00002166796,"domain_scores_codex":[0.9983799,0.00009042549,0.0001612124,0.0005660599,0.00006762637,0.0007347508],"domain_scores_gemma":[0.9986406,0.00006354741,0.00009064638,0.00104324,0.0001179618,0.0000440339],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004552247,0.0001735908,0.01636431,0.000002811611,0.000006929889,0.000005563205,0.0006915662,0.000007159531,0.9760221,0.0001909112,0.0001120869,0.006377411],"study_design_scores_gemma":[0.0005502625,0.00008137934,0.7941108,0.00001042314,0.000001361922,0.00004933805,0.0001205929,0.000002049248,0.188058,0.0001879218,0.01671183,0.0001160868],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9900703,0.00005866614,0.00002644438,0.0008401638,0.0005101333,0.0002016373,0.00001032066,0.00003236623,0.008249925],"genre_scores_gemma":[0.9955906,0.00001002683,0.0000978677,0.00002152312,0.00002761591,0.0000311531,0.000002905147,0.000007035104,0.004211264],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7879642,"threshold_uncertainty_score":0.9999081,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2166375583","doi":"10.1084/jem.193.8.935","title":"Identification of a Chlamydial Protease–Like Activity Factor Responsible for the Degradation of Host Transcription Factors","year":2001,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":372,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Transcription factor; Protease; Degradation (telecommunications); Host factors; Cell biology; Biology; Host (biology); Transcription (linguistics); Identification (biology); Computational biology; Virology; Genetics; Biochemistry; Enzyme; Computer science; Gene; Virus; Ecology","retraction":null,"screen_n_in":null,"score":{"opus":0.06021589896851506,"gpt":0.357697233893557,"spread":0.297481334925042,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001343092,0.00009670164,0.0002363651,0.0001721267,0.0001590621,0.000003257618,0.0002189594,0.00006487669,0.0002038194],"category_scores_gemma":[0.0004538847,0.00004817467,0.00009706055,0.0002088075,0.0004924241,0.0001877489,0.00001375207,0.0002306568,0.000002100628],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007455588,"about_ca_system_score_gemma":0.00008296538,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001825129,"about_ca_topic_score_gemma":0.000006584679,"domain_scores_codex":[0.998776,0.0003834888,0.000486631,0.00008939755,0.00013908,0.0001253651],"domain_scores_gemma":[0.9982153,0.0006302873,0.0005837821,0.0002414443,0.0003135893,0.00001558997],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003739945,0.0003279253,0.0008659095,0.00001135603,0.0001617289,1.850219e-7,0.00246751,0.000006099539,0.9908754,0.00005718285,0.0001761708,0.001310539],"study_design_scores_gemma":[0.001278284,0.001508398,0.0455199,0.00003893082,0.00007167707,0.00007436347,0.003254274,0.00000728111,0.9475664,0.00002437065,0.0006182392,0.00003787859],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916123,0.002609431,0.003204742,0.001042442,0.0007137532,0.0007736974,0.0000146673,0.000004571285,0.00002437674],"genre_scores_gemma":[0.9991193,0.0002104736,0.00001139484,0.00000798321,0.00007964208,0.00001798129,0.000005103934,0.000008596341,0.0005394656],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04465399,"threshold_uncertainty_score":0.223168,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2120419610","doi":"10.1038/ng.2214","title":"Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing","year":2012,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":312,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Centre for Disease Control","funders":"National Institute for Health and Care Research; Wellcome Trust","keywords":"Biology; Chlamydia trachomatis; Lymphogranuloma venereum; Phylogenetic tree; Trachoma; Genetics; Phylogenetics; Multilocus sequence typing; Genome; Whole genome sequencing; Chlamydiaceae; Evolutionary biology; Virology; Computational biology; Genotype; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.06388679883420732,"gpt":0.3726815488172143,"spread":0.3087947499830069,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001225566,0.0001891427,0.0004273479,0.00048874,0.0002332917,0.00001876831,0.0002956903,0.0006901079,0.0004031431],"category_scores_gemma":[0.0006870055,0.0001812848,0.0002835612,0.001032332,0.0003924954,0.00009442568,0.0001127627,0.001715819,0.000237149],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005672172,"about_ca_system_score_gemma":0.00005851714,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005902878,"about_ca_topic_score_gemma":0.00002766413,"domain_scores_codex":[0.9977343,0.0007152241,0.0006087373,0.0003936349,0.0001088975,0.0004391984],"domain_scores_gemma":[0.9984977,0.0002770307,0.0002501898,0.0006333855,0.0002768547,0.00006481546],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002121578,0.0005221917,0.7813441,0.00002434625,0.001762461,2.773962e-7,0.0005227591,0.0001472004,0.2060872,0.0000678432,0.001133061,0.008367332],"study_design_scores_gemma":[0.000345555,0.00004132834,0.9727545,0.000007650256,0.0009327311,0.000004659197,0.0002156984,0.00001585634,0.00639574,0.00004074371,0.01907624,0.0001693358],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9480073,0.04902692,0.0005544972,0.00004988377,0.001281868,0.000294155,0.0004813191,0.00003346426,0.0002705222],"genre_scores_gemma":[0.9970604,0.001085061,0.0002252108,0.00001250118,0.0001454551,0.00001497552,0.0007748666,0.00001904421,0.0006624723],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1996914,"threshold_uncertainty_score":0.7454474,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4221009865","doi":"10.1186/s40168-021-01184-w","title":"Endometrial microbiota composition is associated with reproductive outcome in infertile patients","year":2022,"lang":"en","type":"article","venue":"Microbiome","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":311,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Pacific Centre for Reproductive Medicine","funders":"Instituto de Salud Carlos III; Horizon 2020 Framework Programme; Ministerio de Asuntos Económicos y Transformación Digital, Gobierno de España; Ministerio de Economía y Competitividad; Ministerio de Educación, Cultura y Deporte; European Commission; Conselleria d'Educació, Investigació, Cultura i Esport; Ministerio de Ciencia, Innovación y Universidades","keywords":"Biology; Miscarriage; Ureaplasma; Pregnancy; Microbiome; Gardnerella vaginalis; Reproductive medicine; Embryo transfer; Gynecology; Obstetrics; Bacterial vaginosis; Medicine; Bioinformatics; Microbiology; Mycoplasma; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02237919367022269,"gpt":0.2783372508675085,"spread":0.2559580571972858,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008955192,0.0002653548,0.0004540229,0.001151641,0.0005289807,0.00003240213,0.0003525109,0.0001418536,0.002540173],"category_scores_gemma":[0.0002948517,0.0002558934,0.0001123492,0.00206333,0.0002922476,0.0001897499,0.000370391,0.0009484107,0.000430781],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009778352,"about_ca_system_score_gemma":0.00009830355,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003404003,"about_ca_topic_score_gemma":0.00002048099,"domain_scores_codex":[0.9970506,0.0007767943,0.0005414267,0.0009109426,0.0001050377,0.0006151302],"domain_scores_gemma":[0.9986379,0.0001994379,0.0002363395,0.0006432206,0.0002590952,0.0000239961],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007847997,0.001588172,0.1662798,0.000007534838,0.0002329732,0.0000116955,0.0006387435,0.00004059865,0.8264411,0.00001502166,0.003442298,0.0005172695],"study_design_scores_gemma":[0.01388047,0.001879796,0.5228855,0.00003368773,0.00006739051,0.0002135792,0.0002784223,0.000001225177,0.4157054,0.00004588722,0.04424635,0.0007622669],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960728,0.000233011,0.00001151697,0.0004725255,0.0008843908,0.001053345,0.0006788959,0.00009836062,0.0004951434],"genre_scores_gemma":[0.9953998,0.00000329865,0.00003372294,0.0001458405,0.00003639285,0.0001757724,0.001501769,0.00004117867,0.002662229],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4107357,"threshold_uncertainty_score":0.9999893,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2097304393","doi":"10.1128/cmr.17.4.783-793.2004","title":"Treatment of Infections Caused by Metronidazole-Resistant<i>Trichomonas vaginalis</i>","year":2004,"lang":"en","type":"review","venue":"Clinical Microbiology Reviews","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":310,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"","keywords":"Trichomonas vaginalis; Metronidazole; Trichomoniasis; Nitroimidazole; Medicine; Drug resistance; Antibiotics; Sexually transmitted disease; Microbiology; Biology; Immunology; Gynecology; Pathology; Syphilis","retraction":null,"screen_n_in":null,"score":{"opus":0.1331340276516943,"gpt":0.4482946558495695,"spread":0.3151606281978752,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001886404,0.001175145,0.008156076,0.0005804994,0.0002832618,0.00002152966,0.0008308594,0.002337159,0.001029418],"category_scores_gemma":[0.001631402,0.0008077264,0.003512329,0.001192645,0.002110355,0.00009121549,0.000205462,0.001714764,0.005849256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001087362,"about_ca_system_score_gemma":0.001425996,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001731761,"about_ca_topic_score_gemma":0.00002993616,"domain_scores_codex":[0.9868177,0.005837484,0.004560441,0.001780993,0.00002205301,0.0009812961],"domain_scores_gemma":[0.9926133,0.00259568,0.002277062,0.002117708,0.0002844318,0.0001117783],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004320001,0.00460904,0.0001785506,0.007448608,0.00350493,0.00000487821,0.00002637517,3.046284e-7,0.00507113,0.000163856,0.02259193,0.9563572],"study_design_scores_gemma":[0.001334552,0.003384139,0.000008795843,0.003072182,0.002597132,0.0002948616,0.000003250014,5.679627e-9,0.000174863,0.00002210439,0.9885104,0.0005977661],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00008359969,0.9915858,0.00005466276,0.00005768952,0.002279386,0.004082109,0.001218521,0.0001067278,0.0005315262],"genre_scores_gemma":[0.00002817843,0.9901816,0.00004509971,0.00002861101,0.0001816745,0.0009275472,0.003181278,0.0001053571,0.005320713],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9659184,"threshold_uncertainty_score":0.9998838,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2097453265","doi":"10.1111/j.1574-695x.2001.tb00531.x","title":"Probiotic<i>Lactobacillus</i>dose required to restore and maintain a normal vaginal flora","year":2001,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":306,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Lactobacillus rhamnosus; Bacterial vaginosis; Lactobacillus fermentum; Vaginal flora; Probiotic; Lactobacillus; Biology; Asymptomatic; Flora (microbiology); Microbiology; Vagina; Vaginitis; Internal medicine; Medicine; Bacteria; Lactic acid","retraction":null,"screen_n_in":null,"score":{"opus":0.01598545202095783,"gpt":0.2814284312749628,"spread":0.265442979254005,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001691102,0.0005776418,0.0009290712,0.0006809288,0.0005781202,0.00003449688,0.0009499104,0.001642748,0.004005321],"category_scores_gemma":[0.002527036,0.0005115448,0.0001597482,0.0007503494,0.003357404,0.0001974417,0.0009664183,0.002141656,0.004495696],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002819687,"about_ca_system_score_gemma":0.0005076309,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005686285,"about_ca_topic_score_gemma":0.0002858385,"domain_scores_codex":[0.9943526,0.001384569,0.0008795969,0.001453925,0.00009310327,0.00183621],"domain_scores_gemma":[0.9975725,0.0006021314,0.0001843944,0.001090633,0.0003119882,0.0002383942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001627195,0.0005479474,0.007503135,0.00002214012,0.0007827403,0.0002994518,0.0004276558,0.000002397876,0.9516519,0.003756385,0.00779071,0.02558838],"study_design_scores_gemma":[0.007224129,0.004219666,0.0631199,0.0001691514,0.0001374922,0.03656754,0.0007318237,0.000004651876,0.06115285,0.0008562802,0.824573,0.001243506],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9753011,0.004933866,0.001143442,0.01281602,0.002685871,0.001098173,0.00007064622,0.0003168122,0.001634028],"genre_scores_gemma":[0.9900803,0.0008783178,0.0004833156,0.001834897,0.0002905567,0.0002073241,0.0003521282,0.00007456514,0.005798627],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.890499,"threshold_uncertainty_score":0.9997336,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2923225916","doi":"10.1097/mop.0000000000000578","title":"The growing epidemic of sexually transmitted infections in adolescents: a neglected population","year":2017,"lang":"en","type":"review","venue":"Current Opinion in Pediatrics","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":306,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases","keywords":"Medicine; Population; Incidence (geometry); Environmental health; Epidemiology; Vaccination; Adolescent health; Quarter (Canadian coin); Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.1306519092531774,"gpt":0.4396461225941992,"spread":0.3089942133410218,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001122057,0.0003572144,0.001108953,0.001368964,0.0003331577,0.00003573585,0.0005860272,0.0005813431,0.0000128914],"category_scores_gemma":[0.003315334,0.0002805047,0.0003268239,0.001377301,0.0001862663,0.0003269245,0.0001221376,0.00222926,0.00006876462],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003756256,"about_ca_system_score_gemma":0.000549951,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003444356,"about_ca_topic_score_gemma":0.00006051215,"domain_scores_codex":[0.995881,0.001495722,0.001438748,0.0005699169,0.0001110477,0.0005035739],"domain_scores_gemma":[0.9972034,0.0009259792,0.0008396536,0.0008173629,0.000188202,0.00002544066],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001867635,0.0005087901,0.02831382,0.01151483,0.00004531134,2.859657e-7,0.0000524782,0.00001343493,0.00000444387,0.0002036535,0.000330686,0.9589936],"study_design_scores_gemma":[0.0007792533,0.00008149933,0.02708189,0.01013073,0.0001296289,0.00003599907,0.0000165713,0.000003880061,6.793742e-7,0.0001507528,0.9612398,0.0003493798],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0006334959,0.9869956,0.00008092319,0.00003100164,0.01064758,0.001499727,0.00005049217,0.00003956748,0.00002164786],"genre_scores_gemma":[0.002445445,0.9963275,0.000003481728,6.499992e-7,0.0003661816,0.0002686006,0.0005202412,0.00003738634,0.00003054305],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9609091,"threshold_uncertainty_score":0.9999647,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2167793118","doi":"10.1172/jci17993","title":"Polymorphisms in Chlamydia trachomatis tryptophan synthase genes differentiate between genital and ocular isolates","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":306,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; Health Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Health Canada","keywords":"Chlamydia trachomatis; Tryptophan synthase; Biology; Chlamydiae; Trachoma; Microbiology; Pathogen; Serotype; Gene; Chlamydia; Virology; ATP synthase; Immunology; Genetics; Escherichia coli; Medicine; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.06918561307642289,"gpt":0.3615554809031053,"spread":0.2923698678266824,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002177364,0.0001339539,0.0004901863,0.0002762169,0.00009021563,0.00003308623,0.0001140248,0.0002994647,0.0001418998],"category_scores_gemma":[0.003427149,0.0001094698,0.0001514618,0.000206093,0.0004452981,0.0003394584,0.00002219772,0.0008173448,0.00004002474],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002916596,"about_ca_system_score_gemma":0.0001357707,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000273049,"about_ca_topic_score_gemma":0.000006647081,"domain_scores_codex":[0.9970616,0.001172094,0.001257146,0.0002221911,0.00007302542,0.0002139229],"domain_scores_gemma":[0.9980865,0.0009601491,0.0005242702,0.0001689041,0.0001695506,0.00009067127],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005214751,0.0001625604,0.8454715,0.00001005239,0.0001718488,0.000009902061,0.0001179816,0.000006147142,0.1384836,0.0002152836,0.00005717101,0.01524183],"study_design_scores_gemma":[0.00142104,0.0002765407,0.8900084,0.00004683254,0.00006118291,0.0001564538,0.00004094755,0.000007317067,0.1036556,0.003836227,0.0003846911,0.0001048319],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954118,0.00321734,0.0002938049,0.0003405412,0.0005038102,0.0001491101,0.000005448456,0.000009512452,0.00006864982],"genre_scores_gemma":[0.9988169,0.0003435093,0.0005271931,0.00003068819,0.0001428885,0.000003768691,0.000008581307,0.00001272888,0.0001137488],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04453689,"threshold_uncertainty_score":0.4464047,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2143836943","doi":"10.1016/j.micinf.2006.01.003","title":"Augmentation of antimicrobial metronidazole therapy of bacterial vaginosis with oral probiotic Lactobacillus rhamnosus GR-1 and Lactobacillus reuteri RC-14: randomized, double-blind, placebo controlled trial","year":2006,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":299,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University; Lawson Health Research Institute","funders":"","keywords":"Lactobacillus rhamnosus; Lactobacillus reuteri; Probiotic; Bacterial vaginosis; Metronidazole; Antimicrobial; Biology; Lactobacillus; Microbiology; Placebo; Antibiotics; Medicine; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.01953176166428676,"gpt":0.2710728794458796,"spread":0.2515411177815928,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001005639,0.0003243493,0.001103992,0.0004321758,0.0002152471,0.0000667987,0.0000762261,0.0002869493,0.0001990659],"category_scores_gemma":[0.00005731648,0.0002393028,0.0001860867,0.0002874502,0.0008058869,0.0003306407,0.00005590537,0.0002812138,0.000008155161],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007872751,"about_ca_system_score_gemma":0.00009728629,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003575132,"about_ca_topic_score_gemma":0.0003690969,"domain_scores_codex":[0.9977076,0.0006269564,0.0007618313,0.0004843945,0.00008162374,0.0003375736],"domain_scores_gemma":[0.9986042,0.0002463835,0.0005240412,0.0002529632,0.0003469106,0.00002553366],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.5292665,0.000490038,0.001233493,0.00004578305,0.0004608895,4.481348e-7,0.0001049912,0.0000309079,0.4673163,0.000110132,0.00009551252,0.0008449917],"study_design_scores_gemma":[0.6186616,0.00110301,0.001028972,0.00003417726,0.0001440275,0.00006911064,0.00002241714,0.000003461388,0.3781853,0.00001991819,0.0005596704,0.0001683723],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929225,0.0007457886,0.0004971537,0.00008186036,0.0007583608,0.004547583,0.00003800482,0.00004751527,0.0003612243],"genre_scores_gemma":[0.9979958,0.001012724,0.0001144679,0.000008307201,0.0001078542,0.0002083592,0.0002058406,0.00002639102,0.0003202615],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08939511,"threshold_uncertainty_score":0.9758484,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2100564469","doi":"10.1186/2049-2618-1-12","title":"Comparative meta-RNA-seq of the vaginal microbiota and differential expression by Lactobacillus iners in health and dysbiosis","year":2013,"lang":"en","type":"article","venue":"Microbiome","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":290,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Ontario Genomics; Lawson Health Research Institute; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Microbiology; Dysbiosis; Bacterial vaginosis; Microbiome; Lactobacillus; Population; Metagenomics; Genetics; Gene; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.03052271623780589,"gpt":0.2892899847977915,"spread":0.2587672685599856,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000222825,0.0002059496,0.0005215728,0.0001976448,0.000169177,0.00002871028,0.0001842742,0.0001382003,0.000451313],"category_scores_gemma":[0.00003430029,0.0001307144,0.00007380022,0.0002812176,0.0007841891,0.0001354318,0.0002449614,0.0003756322,0.0000424687],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006554177,"about_ca_system_score_gemma":0.00005942809,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001869631,"about_ca_topic_score_gemma":0.00005020133,"domain_scores_codex":[0.9983357,0.0005152641,0.0003619447,0.0004084661,0.00003386408,0.0003447275],"domain_scores_gemma":[0.9992858,0.0001100578,0.000167177,0.0003164428,0.00008235254,0.00003824179],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004267838,0.0001824577,0.00339161,0.00005244309,0.0002719614,1.36069e-7,0.0008661752,5.101558e-7,0.9860271,0.00001406852,0.008742874,0.0004079584],"study_design_scores_gemma":[0.001149413,0.0001675992,0.0300715,0.00005093147,0.00004305694,0.00005825367,0.0003499166,0.000001243308,0.9598203,0.00002819833,0.008098777,0.0001608349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908029,0.006747914,0.00002386213,0.001407579,0.0001570298,0.0006357007,0.0001213877,0.00001433802,0.00008924957],"genre_scores_gemma":[0.9981999,0.0001736765,0.00006631771,0.00007553664,0.000006504364,0.00004303132,0.00005055184,0.00001073624,0.001373723],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02667989,"threshold_uncertainty_score":0.5330378,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2909229435","doi":"10.1089/aid.2018.0304","title":"The Evolving Facets of Bacterial Vaginosis: Implications for HIV Transmission","year":2019,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":287,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University Medical Centre; McMaster University; University of Toronto; Public Health Agency of Canada; University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; Medical Research Council; National Institutes of Health; Canadian Institutes of Health Research; Burnet Institute","keywords":"Bacterial vaginosis; Human immunodeficiency virus (HIV); Transmission (telecommunications); Multidisciplinary approach; Microbiome; Biology; Immunology; Medicine; Bioinformatics; Microbiology; Computer science; Sociology","retraction":null,"screen_n_in":null,"score":{"opus":0.06806866238057613,"gpt":0.3831949856040354,"spread":0.3151263232234593,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001413666,0.00009908206,0.0001826046,0.000235458,0.001082556,0.00007903203,0.0003142806,0.0001143237,0.0005267066],"category_scores_gemma":[0.000380119,0.00006809828,0.00006767509,0.0002135951,0.0006969915,0.0001615294,0.0001031901,0.0003901252,0.0001030572],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004545713,"about_ca_system_score_gemma":0.000109632,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001137511,"about_ca_topic_score_gemma":0.00001611947,"domain_scores_codex":[0.9985124,0.0002974885,0.0002424015,0.0003490866,0.00008354636,0.0005150096],"domain_scores_gemma":[0.9976853,0.00115926,0.00005236968,0.0005017319,0.0005626566,0.00003866333],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001977347,0.0001123489,0.09185397,0.00004734829,0.00009463817,4.467862e-8,0.0001589453,2.279281e-7,0.8762045,0.01819916,0.005005762,0.008125318],"study_design_scores_gemma":[0.001425771,0.00276729,0.5369191,0.00004995481,0.00001475557,0.000008500944,0.0004120964,4.529886e-7,0.2679584,0.008415349,0.1818855,0.0001428269],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941825,0.002161022,0.0001337354,0.0005280543,0.0001095383,0.0009710834,0.00006243595,0.00002682091,0.001824783],"genre_scores_gemma":[0.9937847,0.00030803,0.00006821049,0.000004694227,0.00004846697,0.0001653919,0.00004290885,0.00001604228,0.005561611],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6082461,"threshold_uncertainty_score":0.8326253,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2105976727","doi":"10.1186/2049-2618-2-23","title":"Characterization of the vaginal microbiota of healthy Canadian women through the menstrual cycle","year":2014,"lang":"en","type":"article","venue":"Microbiome","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":284,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Plant Biotechnology Institute; Lawson Health Research Institute; National Research Council Canada; British Columbia Centre of Excellence for Women's Health; Western University; Women's Health Research Institute; University of British Columbia; Saskatchewan Research Council (Canada); University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Biology; Menstrual cycle; Medical microbiology; Microbial ecology; Bacterial vaginosis; Vaginal flora; Physiology; Microbiology; Bacteria; Genetics; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.009429078778070251,"gpt":0.2469082116783515,"spread":0.2374791329002812,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005407258,0.0001334756,0.0002309782,0.0001356992,0.0003131082,0.00001115512,0.0004724984,0.0001414533,0.0004417054],"category_scores_gemma":[0.00007648411,0.00008394477,0.00007722569,0.0004993878,0.0007612177,0.00008484144,0.0001002391,0.0002928873,0.0001435321],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002306191,"about_ca_system_score_gemma":0.0003506019,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02036952,"about_ca_topic_score_gemma":0.001812686,"domain_scores_codex":[0.9984834,0.0004386467,0.0003319011,0.0002551576,0.00003749027,0.0004534727],"domain_scores_gemma":[0.9988425,0.00007496099,0.0001971776,0.0006803001,0.0001811564,0.00002395258],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004047891,0.00006542598,0.001018181,0.00002938761,0.00008243735,9.289606e-8,0.001553186,0.000008161443,0.9954483,0.0005932532,0.0004607221,0.0007004034],"study_design_scores_gemma":[0.0005564398,0.0001860021,0.03938873,0.00002288028,0.00001419191,0.00008800999,0.0002189577,0.000001829609,0.8065671,0.0001192352,0.1527234,0.0001132453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958229,0.00008385489,0.00006067761,0.001848439,0.0006677358,0.0003862613,0.0002068896,0.00001324416,0.0009099789],"genre_scores_gemma":[0.9983817,0.00001433662,0.00002306544,0.0002415226,0.00003668739,0.00001979412,0.00006930199,0.00001561044,0.001198003],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1888812,"threshold_uncertainty_score":0.9861539,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2100651011","doi":"10.1086/497341","title":"The Unexpected Impact of a <i>Chlamydia trachomatis</i> Infection Control Program on Susceptibility to Reinfection","year":2005,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":279,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"British Columbia Centre for Disease Control","keywords":"Chlamydia trachomatis; Chlamydia; Population; Chlamydial infection; Transmission (telecommunications); Proportional hazards model; Demography; Chlamydiaceae; Chlamydiales; Survival analysis; Medicine; Sexually transmitted disease; Chlamydia trachomatis infection; Immunology; Biology; Internal medicine; Environmental health; Human immunodeficiency virus (HIV)","retraction":null,"screen_n_in":null,"score":{"opus":0.009369823169385706,"gpt":0.3186979838999202,"spread":0.3093281607305344,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00155716,0.0002449558,0.000405277,0.0003359992,0.0006408875,0.00005655418,0.0002641521,0.0001299347,0.0001902435],"category_scores_gemma":[0.002525862,0.0001279032,0.0005187507,0.0007246424,0.0004205104,0.0002740341,0.00003715755,0.0007354551,0.0001380055],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005196352,"about_ca_system_score_gemma":0.0002800584,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006051254,"about_ca_topic_score_gemma":0.0003583175,"domain_scores_codex":[0.9969675,0.001493708,0.0007523924,0.0001989929,0.0001840004,0.0004033835],"domain_scores_gemma":[0.9963124,0.001343284,0.0006454782,0.000591826,0.001018818,0.00008814324],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.006023001,0.006882139,0.5475384,0.00003732437,0.002462935,0.000003022451,0.0007067932,0.03285565,0.2237278,0.0002151769,0.008601049,0.1709467],"study_design_scores_gemma":[0.002130635,0.004999038,0.9736902,0.00004850203,0.0002659071,0.0004203723,0.00005298999,0.00002927386,0.01620968,0.0002006362,0.001804992,0.0001477636],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959394,0.0008554054,0.0004762044,0.0003307695,0.0005608003,0.001152773,0.00002671802,0.0001040728,0.0005538752],"genre_scores_gemma":[0.9991783,0.0002806353,0.000006844091,0.00004144639,0.0002961237,0.00006112162,0.000004105969,0.00002354926,0.0001078031],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4261518,"threshold_uncertainty_score":0.5215743,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2171969497","doi":"10.1371/journal.pmed.1000416","title":"Intravaginal Practices, Bacterial Vaginosis, and HIV Infection in Women: Individual Participant Data Meta-analysis","year":2011,"lang":"en","type":"review","venue":"PLoS Medicine","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":278,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"Office of AIDS Research; National Institutes of Health","keywords":"Vaginal flora; Bacterial vaginosis; Medicine; Hazard ratio; Odds ratio; Vagina; Prospective cohort study; Meta-analysis; Confidence interval; Cohort study; Obstetrics; Internal medicine; Gynecology; Demography; Surgery","retraction":null,"screen_n_in":null,"score":{"opus":0.5615176307278119,"gpt":0.4546375290036284,"spread":0.1068801017241835,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003941648,0.0005666593,0.004447833,0.001713014,0.0001325883,0.00003964129,0.0006801101,0.0005373502,0.008620276],"category_scores_gemma":[0.003614881,0.000376683,0.000222001,0.001480778,0.0006676568,0.0004272498,0.000620876,0.001730131,0.0003597494],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009522619,"about_ca_system_score_gemma":0.0003318393,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001244375,"about_ca_topic_score_gemma":0.0003082386,"domain_scores_codex":[0.9940353,0.002530004,0.001187626,0.001384976,0.0001600217,0.0007020735],"domain_scores_gemma":[0.9957143,0.001013294,0.001198151,0.001841902,0.0001389012,0.00009342883],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001834838,0.001673828,0.0007390326,0.004696157,0.7653264,0.00004114126,0.00195765,2.437179e-7,0.0001772389,0.0001190157,0.003951986,0.2211338],"study_design_scores_gemma":[0.0003466654,0.0002705975,0.0007294964,0.0002174541,0.3527601,0.0001044671,0.0000381133,2.560602e-7,0.000008282479,0.00001370984,0.6452884,0.000222484],"study_design_candidate":"meta_analysis","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001180757,0.9964216,0.000009904396,0.000270721,0.0004346979,0.001054266,0.0003442579,0.00005635405,0.000227426],"genre_scores_gemma":[0.001219775,0.9937787,0.00002849805,0.00003092303,0.000295171,0.0006975803,0.003487034,0.00004224102,0.0004200685],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.6413364,"threshold_uncertainty_score":0.9998685,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1474461326","doi":"10.1038/mi.2015.86","title":"Cervicovaginal microbiome dysbiosis is associated with proteome changes related to alterations of the cervicovaginal mucosal barrier","year":2015,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":278,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Prince Edward Island","funders":"University of Liverpool; European and Developing Countries Clinical Trials Partnership; European Commission; Aids Fonds","keywords":"Dysbiosis; Biology; Microbiome; Microbiology; Mucus; Proteome; Immunology; Proteases; Human microbiome; Inflammation; Biochemistry; Bioinformatics","retraction":null,"screen_n_in":null,"score":{"opus":0.02431459169909,"gpt":0.2757992582705068,"spread":0.2514846665714168,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000803539,0.0003779577,0.0005585428,0.0005551816,0.0004039921,0.00004016267,0.000802027,0.0004880282,0.001025884],"category_scores_gemma":[0.0005937833,0.0002721793,0.0001237156,0.001609448,0.0009797364,0.0001905191,0.0004364167,0.0009528328,0.0008617744],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003141245,"about_ca_system_score_gemma":0.0005143968,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005247691,"about_ca_topic_score_gemma":0.0003133403,"domain_scores_codex":[0.996821,0.0009848741,0.000509312,0.0007123229,0.0001539994,0.0008184381],"domain_scores_gemma":[0.997326,0.000164652,0.000265597,0.001097177,0.001071295,0.00007532146],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005737697,0.000548502,0.03604493,0.000018103,0.001418826,0.000008543782,0.002220402,0.00002310797,0.9538968,0.0004928238,0.003856538,0.0008976389],"study_design_scores_gemma":[0.003702993,0.001960726,0.2221273,0.00009126726,0.0001646685,0.000708216,0.0004512135,0.000003691293,0.7416622,0.0004216785,0.02820958,0.0004964627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984632,0.0009763307,0.00007176159,0.01007349,0.001147982,0.001361369,0.0002165888,0.0001470042,0.001373454],"genre_scores_gemma":[0.9923066,0.00001496261,0.000140711,0.0004003836,0.00003187799,0.000280743,0.0001313539,0.00005589117,0.006637502],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2122346,"threshold_uncertainty_score":0.9999731,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2088236563","doi":"10.1016/j.micinf.2006.08.008","title":"Clinical study comparing probiotic Lactobacillus GR-1 and RC-14 with metronidazole vaginal gel to treat symptomatic bacterial vaginosis","year":2006,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":273,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University; Lawson Health Research Institute","funders":"","keywords":"Bacterial vaginosis; Probiotic; Lactobacillus crispatus; Metronidazole; Lactobacillus; Lactobacillus rhamnosus; Internal medicine; Vaginitis; Biology; Lactobacillus fermentum; Lactobacillus casei; Microbiology; Vagina; Lactobacillus reuteri; Medicine; Antibiotics; Gynecology; Surgery; Food science; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.01905280693383776,"gpt":0.2912841401054199,"spread":0.2722313331715822,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005017813,0.000237034,0.0004102575,0.0002657182,0.0003737312,0.0001256817,0.00006348887,0.0001348952,0.00008815495],"category_scores_gemma":[0.00004359149,0.0001873529,0.00004274946,0.0003139149,0.0002262549,0.0002213845,0.0001090462,0.0003425759,0.00010832],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009552344,"about_ca_system_score_gemma":0.00003681687,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003317525,"about_ca_topic_score_gemma":0.000776521,"domain_scores_codex":[0.9983078,0.0003327624,0.0003751987,0.0005788251,0.00004623314,0.000359239],"domain_scores_gemma":[0.9993694,0.0001031066,0.0000905413,0.0002628045,0.0001308029,0.00004328975],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002434364,0.001077073,0.8267563,0.00005209489,0.0001524541,0.000002313187,0.0001547588,0.0000270533,0.1669506,0.00004175579,0.0004862092,0.004055924],"study_design_scores_gemma":[0.002837352,0.002422818,0.9702374,0.00004686529,0.0001653633,0.0002593072,0.0001045725,0.000007969797,0.01987919,0.00001888437,0.00376618,0.000254047],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973328,0.0002668705,0.0003195899,0.00007867231,0.0003630245,0.0009265539,0.000007752506,0.0001012925,0.0006034369],"genre_scores_gemma":[0.9990495,0.00005322633,0.00009195995,0.00001421085,0.0001217818,0.00005622344,0.00003642152,0.0000210944,0.0005555443],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1470714,"threshold_uncertainty_score":0.764003,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3197926693","doi":"10.1016/s2666-5247(21)00171-3","title":"WHO global antimicrobial resistance surveillance for Neisseria gonorrhoeae 2017–18: a retrospective observational study","year":2021,"lang":"en","type":"article","venue":"The Lancet Microbe","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":272,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan; Public Health Agency of Canada","funders":"World Health Organization","keywords":"Cefixime; Neisseria gonorrhoeae; Ciprofloxacin; Antibiotic resistance; Medicine; Azithromycin; Ceftriaxone; Internal medicine; Environmental health; Veterinary medicine; Microbiology; Antibiotics; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.1052802287415705,"gpt":0.3662537106181758,"spread":0.2609734818766053,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001168959,0.0002620032,0.0005876725,0.00003138044,0.000671762,0.0001024217,0.0005968032,0.0001548091,0.000452354],"category_scores_gemma":[0.001091876,0.0002153365,0.0001606012,0.0005426928,0.0002943633,0.0001561036,0.0002622242,0.0004637423,0.0003409545],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002969889,"about_ca_system_score_gemma":0.000350614,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001352722,"about_ca_topic_score_gemma":0.001737907,"domain_scores_codex":[0.9974608,0.0006459964,0.0003710392,0.0007969884,0.00004250556,0.0006826362],"domain_scores_gemma":[0.9974707,0.0004485176,0.0001696941,0.001130764,0.000757214,0.00002307058],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000956047,0.0005458031,0.3579996,0.00003461751,0.0004762399,0.00000404568,0.0003309355,0.00001994717,0.3251308,0.001970439,0.3123713,0.000160263],"study_design_scores_gemma":[0.002648807,0.0001214197,0.830497,0.00003128224,0.0000317389,0.0001202738,0.000233792,0.00000115455,0.01441951,0.0007190594,0.1509214,0.0002545658],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9822614,0.002643169,0.0004595859,0.006694798,0.001360497,0.001394232,0.001295905,0.0001351907,0.003755252],"genre_scores_gemma":[0.9848717,0.0001497967,0.0004456763,0.0006728738,0.0006049966,0.0001548297,0.0003519667,0.00003205938,0.01271605],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4724975,"threshold_uncertainty_score":0.8781168,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2969536729","doi":"10.1071/sh19023","title":"World Health Organization Global Gonococcal Antimicrobial Surveillance Program (WHO GASP): review of new data and evidence to inform international collaborative actions and research efforts","year":2019,"lang":"en","type":"review","venue":"Sexual Health","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":272,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan; Public Health Agency of Canada","funders":"National Institutes of Health","keywords":"Medicine; Azithromycin; Antibiotic resistance; Ceftriaxone; Neisseria gonorrhoeae; Gonorrhea; Intensive care medicine; Public health; Environmental health; Family medicine; Antibiotics; Microbiology; Nursing","retraction":null,"screen_n_in":null,"score":{"opus":0.2954371982685368,"gpt":0.5531479151043728,"spread":0.257710716835836,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.004953426,0.0003607818,0.001778993,0.0005320411,0.0004585537,0.00008533749,0.0007469807,0.0002317063,0.0001134383],"category_scores_gemma":[0.003045766,0.0003176244,0.00004025509,0.004067432,0.0003837895,0.0004268989,0.001190417,0.001065785,0.0001597444],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009873459,"about_ca_system_score_gemma":0.009824762,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001715917,"about_ca_topic_score_gemma":0.001799464,"domain_scores_codex":[0.9951051,0.001598573,0.001200913,0.001178746,0.0002126587,0.0007039877],"domain_scores_gemma":[0.9958968,0.0007129526,0.0007150525,0.001228543,0.001242461,0.0002042026],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003993809,0.0001423164,0.0006517117,0.05512812,0.000183306,4.173422e-7,0.000161663,2.395537e-7,0.000003183007,0.0002206517,0.06649855,0.8769699],"study_design_scores_gemma":[0.0002244702,0.000898794,0.001455245,0.03674052,0.00002828656,0.0001696918,0.0000561182,5.404102e-7,0.000002127125,0.000003664009,0.9602219,0.0001986726],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001332378,0.9843186,0.00005757362,0.006062466,0.0008178177,0.007028093,0.001379199,0.0000577964,0.0001452365],"genre_scores_gemma":[0.00007121819,0.9945021,0.0004784976,0.0002516887,0.0001580773,0.00007705153,0.00275384,0.00003570447,0.001671818],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8937233,"threshold_uncertainty_score":0.9999276,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2101604556","doi":"10.1128/jvi.77.8.4558-4565.2003","title":"Progesterone Increases Susceptibility and Decreases Immune Responses to Genital Herpes Infection","year":2003,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":270,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"Immune system; Estrous cycle; Biology; Herpes simplex virus; Antibody; Immunology; Virus; Internal medicine; Physiology; Endocrinology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01936533751482928,"gpt":0.3048005737302433,"spread":0.285435236215414,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001478052,0.0001444243,0.0003587375,0.0004133956,0.0001679098,0.00002017689,0.00009640682,0.0001829851,0.000431794],"category_scores_gemma":[0.004570729,0.000118325,0.00009311245,0.000196589,0.0003732912,0.0002131302,0.00005876341,0.0003542289,0.00009269015],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007163942,"about_ca_system_score_gemma":0.0001647805,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002345762,"about_ca_topic_score_gemma":0.00007837503,"domain_scores_codex":[0.9975267,0.001415816,0.0004719075,0.0002390191,0.00005371414,0.0002928629],"domain_scores_gemma":[0.9985521,0.0005881606,0.0002106703,0.0002504934,0.0003299999,0.00006861422],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001791597,0.0008125163,0.2482419,0.00001182795,0.0002161843,0.00002386486,0.0001110963,0.000008062924,0.7420407,0.0002004256,0.0002254468,0.006316422],"study_design_scores_gemma":[0.001123223,0.003229651,0.7770609,0.00001348669,0.00005663526,0.005914095,0.00008531697,1.557294e-7,0.1924934,0.0003798937,0.01952617,0.0001171119],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954839,0.003163999,0.0002145924,0.0003546746,0.0003555017,0.0002331926,0.000003854854,0.00001865574,0.0001715743],"genre_scores_gemma":[0.9989708,0.0002223943,0.0002754675,0.00006171907,0.00005079616,0.00001177944,0.000002052451,0.00001250668,0.000392493],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5495473,"threshold_uncertainty_score":0.547192,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2138904885","doi":"10.1056/nejmoa040979","title":"Mass Treatment with Single-Dose Azithromycin for Trachoma","year":2004,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":265,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canadian Science Centre for Human and Animal Health; Manitoba Health","funders":"Medical Research Council; Royal Society of Tropical Medicine and Hygiene; Wellcome Trust; Royal Society; International Trachoma Initiative","keywords":"Azithromycin; Trachoma; Medicine; Dermatology; Microbiology; Antibiotics; Biology; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.04002204977754399,"gpt":0.3075312054672925,"spread":0.2675091556897485,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005083506,0.0001368798,0.0003619498,0.000209124,0.00009201958,0.000006261952,0.0001023551,0.00007431347,0.0002084867],"category_scores_gemma":[0.0001908334,0.00007300841,0.00006410615,0.0001316121,0.0002100386,0.0000959551,0.000004265672,0.000247353,0.00001740024],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001913792,"about_ca_system_score_gemma":0.0002563544,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001372766,"about_ca_topic_score_gemma":0.00005913152,"domain_scores_codex":[0.9991443,0.00008707701,0.000313838,0.0001482826,0.00007659232,0.0002298718],"domain_scores_gemma":[0.9990679,0.0002608534,0.00018844,0.0001630436,0.000254073,0.00006569399],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003607564,0.0005313266,0.001715237,0.00001393708,0.0005901601,0.0000927062,0.001274963,0.0002066686,0.6873688,0.0002988536,0.001104459,0.3031954],"study_design_scores_gemma":[0.2530321,0.06708393,0.007068978,0.0003393279,0.0004204384,0.01174319,0.0006324984,7.029332e-7,0.2427956,0.003914896,0.4127372,0.0002310244],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9630911,0.004925973,0.01555461,0.01345867,0.0008755197,0.0004544026,0.000005513733,0.00002143731,0.001612785],"genre_scores_gemma":[0.9949027,0.0002023649,0.001686811,0.00004638121,0.001285263,0.000006445955,0.000009768472,0.00001652654,0.00184371],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4445731,"threshold_uncertainty_score":0.2977197,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2153942843","doi":"10.1371/journal.pone.0012078","title":"Deep Sequencing of the Vaginal Microbiota of Women with HIV","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":261,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University; Lawson Health Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto; Lawson Health Research Institute","keywords":"Bacterial vaginosis; Lactobacillus crispatus; Biology; Gardnerella vaginalis; Prevotella; Lactobacillus; Metagenomics; Population; Microbiology; Genetics; Bacteria; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.02304472480808244,"gpt":0.2330330787987702,"spread":0.2099883539906878,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002884405,0.00006958559,0.0001795844,0.00007117146,0.00007188831,0.000003015964,0.0002169864,0.00008210162,0.0006396938],"category_scores_gemma":[0.0001877251,0.00004457994,0.00002326792,0.000192783,0.000525135,0.00004611413,0.00006752225,0.0004635303,0.00007447978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006210026,"about_ca_system_score_gemma":0.0001286685,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009938196,"about_ca_topic_score_gemma":0.00003096648,"domain_scores_codex":[0.9993328,0.00008906041,0.0001408611,0.000158286,0.0000472527,0.0002316985],"domain_scores_gemma":[0.9991108,0.0000764386,0.00009334963,0.0004828647,0.0002249912,0.00001152869],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009190801,0.0005572019,0.02913466,0.00004962007,0.0003540549,3.099438e-7,0.0006472766,0.00000667236,0.9688129,0.0001882017,0.00001917155,0.0001379835],"study_design_scores_gemma":[0.0003324479,0.0001718119,0.03537319,0.0000361947,0.0000307218,0.00002752442,0.0001487795,0.000002407489,0.9636044,0.00004770266,0.0001746034,0.00005023712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980714,0.00007056614,0.00002257197,0.000187814,0.00005631504,0.0002051183,0.000008063324,0.00001294196,0.001365175],"genre_scores_gemma":[0.9981341,0.000005337326,0.0004460016,0.000008258061,0.00001619991,0.0000185069,0.000002915253,0.000009167193,0.001359491],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006238531,"threshold_uncertainty_score":0.7004198,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2145350679","doi":"10.1371/journal.pone.0002879","title":"An Expanded Inventory of Conserved Meiotic Genes Provides Evidence for Sex in Trichomonas vaginalis","year":2008,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":260,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Chang Gung Medical Foundation; Chang Gung University; York University; Joint Genome Institute; Univerzita Karlova v Praze; School of Medicine, New York University; National Institutes of Health; National Science Foundation","keywords":"Trichomonas vaginalis; Biology; Gene; Trichomonas; Genetics; Meiosis","retraction":null,"screen_n_in":null,"score":{"opus":0.2682113852356192,"gpt":0.3521843715111301,"spread":0.08397298627551092,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006094678,0.0001066335,0.0003117831,0.0002568326,0.00009962809,0.000004622278,0.000185863,0.0001164273,0.00008496183],"category_scores_gemma":[0.00133712,0.0001020392,0.00005001541,0.0002410604,0.0003405436,0.0002785996,0.00003067015,0.0001833147,0.00003127704],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007084517,"about_ca_system_score_gemma":0.0001799079,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004311417,"about_ca_topic_score_gemma":0.00004054847,"domain_scores_codex":[0.998674,0.0003947271,0.0002853158,0.0002889231,0.00006836865,0.0002886421],"domain_scores_gemma":[0.9987239,0.000526275,0.00009033314,0.0003940442,0.000240186,0.00002532105],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002543743,0.002377065,0.3166298,0.0001311853,0.0001593904,0.000001721629,0.0007006418,0.000003565911,0.6793408,0.00002485684,0.00009177587,0.0002848256],"study_design_scores_gemma":[0.0008914308,0.0006226077,0.08482018,0.0001187703,0.0000415273,0.00002161099,0.0001631499,0.00002126533,0.9129956,0.0000879731,0.0001068098,0.0001090577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920883,0.006696193,0.00004036898,0.0001336863,0.00004857272,0.000876262,0.000008202493,0.00003819546,0.00007020099],"genre_scores_gemma":[0.9972879,0.0005455877,0.0004382292,0.00001829025,0.00003445927,0.0002483854,0.00002149603,0.00001448145,0.001391163],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2336548,"threshold_uncertainty_score":0.416104,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2997536342","doi":"10.1177/0956462419886775","title":"2018 UK national guideline for the management of infection with <i>Neisseria gonorrhoeae</i>","year":2019,"lang":"en","type":"article","venue":"International Journal of STD & AIDS","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":258,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute for Health and Care Research","keywords":"Medicine; Neisseria gonorrhoeae; Guideline; Gonorrhea; Gonococcal infection; Neisseriaceae; Sexually transmitted disease; Gynecology; Virology; Family medicine; Microbiology; Antibiotics; Syphilis; Human immunodeficiency virus (HIV); Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.01716288190919815,"gpt":0.3265999606186969,"spread":0.3094370787094988,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00112642,0.00009157771,0.0001498489,0.0002477419,0.00005729888,0.000021459,0.0003056198,0.000053145,0.0007158092],"category_scores_gemma":[0.00006902253,0.00005774183,0.0001279356,0.0001476951,0.0001038398,0.0001871426,0.00005486728,0.000209844,0.000102737],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001329268,"about_ca_system_score_gemma":0.0001089808,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000496942,"about_ca_topic_score_gemma":0.000005903842,"domain_scores_codex":[0.9990781,0.00005454702,0.0004885492,0.0001295727,0.00012872,0.0001205081],"domain_scores_gemma":[0.9969954,0.0001945892,0.0003996264,0.0001393011,0.002259691,0.00001136774],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.01147764,0.002113994,0.2273059,0.0001765953,0.02739148,0.000008747954,0.0004352935,0.02048082,0.4601018,0.07272248,0.0767507,0.1010346],"study_design_scores_gemma":[0.006656549,0.002983534,0.1295728,0.0002459995,0.000235661,0.001197124,0.0003400272,0.00008020928,0.05030059,0.00278888,0.8053531,0.0002455309],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9577191,0.0009379996,0.02776215,0.002344149,0.005233179,0.0006631506,0.00004837188,0.00001921087,0.00527262],"genre_scores_gemma":[0.9956423,0.0002299161,0.001907137,0.00008421887,0.0001983181,0.00001645757,0.00001643614,0.0000134907,0.001891703],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7286024,"threshold_uncertainty_score":0.7837608,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2042891164","doi":"10.1097/01.olq.0000190092.59482.96","title":"Vaginal Swabs Are the Specimens of Choice When Screening for Chlamydia trachomatis and Neisseria gonorrhoeae: Results From a Multicenter Evaluation of the APTIMA Assays for Both Infections","year":2005,"lang":"en","type":"article","venue":"Sexually Transmitted Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":254,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Chlamydia trachomatis; Medicine; Neisseria gonorrhoeae; Gynecology; Concordance; Chlamydia; Vaginal discharge; Sexually transmitted disease; Internal medicine; Obstetrics; Virology; Microbiology; Syphilis; Immunology; Biology; Human immunodeficiency virus (HIV)","retraction":null,"screen_n_in":null,"score":{"opus":0.04042974714598666,"gpt":0.3185463404830435,"spread":0.2781165933370568,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007096127,0.0001891657,0.0002736809,0.0001089488,0.0003747898,0.00002784257,0.000234674,0.0001200899,0.0001169788],"category_scores_gemma":[0.001541298,0.0001280465,0.0001650201,0.0001724254,0.0003628207,0.00022129,0.00002878445,0.0002018353,0.000003171986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004693414,"about_ca_system_score_gemma":0.0001493881,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003916858,"about_ca_topic_score_gemma":0.0006019212,"domain_scores_codex":[0.9982672,0.0004737073,0.0004788782,0.000416486,0.00008853895,0.0002751863],"domain_scores_gemma":[0.9966329,0.001975301,0.0002893041,0.0005116548,0.0005627914,0.00002801099],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.007479216,0.005433414,0.2601663,0.0004210866,0.004651487,1.82917e-7,0.008843089,0.008344978,0.4809535,0.0004936046,0.004414544,0.2187985],"study_design_scores_gemma":[0.007554182,0.0002077939,0.9710308,0.00009273289,0.001022465,0.000003862903,0.0009503948,0.002642377,0.01138723,0.0004780295,0.004462288,0.0001678966],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9808493,0.002965354,0.00807676,0.001374113,0.0002253594,0.002664217,0.003683389,0.00003716672,0.0001242867],"genre_scores_gemma":[0.9981964,0.00002745118,0.0007111098,0.0000462153,0.000110698,0.0003977561,0.000304211,0.00002455849,0.0001815867],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7108644,"threshold_uncertainty_score":0.5221586,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2123315510","doi":"10.1016/s0140-6736(03)13909-8","title":"Strategies for control of trachoma: observational study with quantitative PCR","year":2003,"lang":"en","type":"article","venue":"The Lancet","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":238,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Canada","funders":"World Health Organization","keywords":"Trachoma; Chlamydia trachomatis; Chlamydiae; Medicine; Chlamydia; Antibiotics; Tanzania; Immunology; Biology; Pathology; Microbiology; Geography","retraction":null,"screen_n_in":null,"score":{"opus":0.1678377014701112,"gpt":0.3818240938025341,"spread":0.213986392332423,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000722922,0.0000671511,0.0002277285,0.00003073628,0.0001293978,0.00001115987,0.0001358684,0.00003060258,0.00008438768],"category_scores_gemma":[0.0002512744,0.00003797559,0.00002739449,0.0001145186,0.0002198326,0.00008662811,0.000005148321,0.0001445737,0.00002082326],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001088681,"about_ca_system_score_gemma":0.0001091148,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004026063,"about_ca_topic_score_gemma":0.00004967033,"domain_scores_codex":[0.9992216,0.0003220053,0.0001225475,0.0001383029,0.00003392853,0.000161567],"domain_scores_gemma":[0.9987843,0.0006459123,0.00006719762,0.0002760039,0.000222557,0.000004033156],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","study_design_scores_codex":[0.004247312,0.001534174,0.1803131,0.00004322022,0.001417994,0.000001288307,0.00318082,0.001162418,0.1343376,0.6694174,0.003995055,0.0003497066],"study_design_scores_gemma":[0.01651906,0.006179894,0.8874454,0.0000190847,0.0001528931,0.00004597596,0.02338381,0.00002435673,0.02244203,0.01439696,0.02915024,0.0002402943],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984901,0.0004505307,0.009718574,0.0006186243,0.00009743615,0.00100649,0.00006222969,0.00002091689,0.003124272],"genre_scores_gemma":[0.9989991,0.000003542799,0.0003216055,0.00002949309,0.00002618202,0.0001738408,0.000009291599,0.000006444987,0.0004304847],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7071323,"threshold_uncertainty_score":0.15486,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2792848668","doi":"10.3201/eid2404.171873","title":"Cooperative Recognition of Internationally Disseminated Ceftriaxone-Resistant <i>Neisseria</i><i>gonorrhoeae</i> Strain","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":238,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"National Health and Medical Research Council; NSW Ministry of Health; Public Health Agency; Australian Government; NSW Health Pathology; University of Queensland; South Eastern Sydney Local Health District; Public Health Agency of Canada; World Health Organization","keywords":"Neisseria gonorrhoeae; Ceftriaxone; Multilocus sequence typing; Biology; Typing; Virology; Men who have sex with men; Phylogenetic tree; Microbiology; Antibiotic resistance; Genetics; Genotype; Gene; Antibiotics; Syphilis","retraction":null,"screen_n_in":null,"score":{"opus":0.0150263903474594,"gpt":0.2925871871347885,"spread":0.2775607967873291,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003038229,0.0002325843,0.0003032427,0.000399464,0.0003734968,0.00003598299,0.0001953776,0.0001215127,0.003316971],"category_scores_gemma":[0.001210975,0.0002211995,0.0001425849,0.0006496536,0.0006253083,0.0002886497,0.00008271433,0.0002537958,0.00063921],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001141087,"about_ca_system_score_gemma":0.0001658917,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002746372,"about_ca_topic_score_gemma":0.0001215451,"domain_scores_codex":[0.9982745,0.0003675131,0.0004567257,0.0004825689,0.00005824478,0.0003604318],"domain_scores_gemma":[0.9980369,0.0002604306,0.0002176281,0.0003567586,0.00107747,0.00005079201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006654504,0.001194972,0.02153397,0.00005594964,0.0006779566,0.000002738523,0.0005126941,0.00004152894,0.9518384,0.0008316985,0.004793956,0.01785072],"study_design_scores_gemma":[0.005172956,0.003869795,0.2404976,0.0003862702,0.0004301775,0.0001917143,0.001185129,0.00005500959,0.6991495,0.00316621,0.04465908,0.001236532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882127,0.0007071383,0.0006288086,0.0001458066,0.001058554,0.0004762238,0.0005959848,0.0002507139,0.007924082],"genre_scores_gemma":[0.9978333,0.00007967283,0.0000243356,0.00004287764,0.0001777991,0.00009774422,0.0006639478,0.00003186777,0.001048426],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2526889,"threshold_uncertainty_score":0.9975941,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2025396127","doi":"10.1097/qad.0b013e32834541d9","title":"Safety and effectiveness of BufferGel and 0.5% PRO2000 gel for the prevention of HIV infection in women","year":2011,"lang":"en","type":"article","venue":"AIDS","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":233,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Serostatus; Microbicide; Medicine; Placebo; Hazard ratio; Incidence (geometry); Adverse effect; Microbicides for sexually transmitted diseases; Internal medicine; Human immunodeficiency virus (HIV); Surgery; Confidence interval; Immunology; Population; Viral load; Health services; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.02128102679574461,"gpt":0.2893448633862132,"spread":0.2680638365904686,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001220718,0.00005640127,0.00015132,0.0001100905,0.00005202636,0.000001621086,0.00003664634,0.00007684268,0.00004012499],"category_scores_gemma":[0.0001906348,0.00004053524,0.00002361998,0.000128193,0.0002186537,0.00008132877,0.00003499263,0.00009874265,0.000001906276],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002855613,"about_ca_system_score_gemma":0.0000250517,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003316485,"about_ca_topic_score_gemma":0.00001435346,"domain_scores_codex":[0.9992933,0.0002802843,0.0001513801,0.0001437863,0.00001552502,0.0001157515],"domain_scores_gemma":[0.9993443,0.0003800972,0.00005689116,0.0001373777,0.00007554815,0.000005714494],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002998481,0.000422952,0.578809,0.0003368983,0.0002374507,1.045173e-7,0.001791156,0.000007240752,0.3713104,0.002718192,0.000008395738,0.04135967],"study_design_scores_gemma":[0.0009335777,0.0007507263,0.8461444,0.00003377061,0.00001392302,0.000007468111,0.00006798432,0.000002779064,0.1503875,0.001394473,0.0002291934,0.00003417242],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968599,0.0005850922,0.00154137,0.000009836463,0.00008262459,0.0006611425,0.000007549653,0.000006411378,0.0002460428],"genre_scores_gemma":[0.9993085,0.0003126393,0.00004063584,0.000001063419,0.000004582782,0.0001394208,0.000003966607,0.000005189301,0.0001840404],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2673354,"threshold_uncertainty_score":0.1652979,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2136906333","doi":"10.1073/pnas.0504198102","title":"Chlamydial IFN-γ immune evasion is linked to host infection tropism","year":2005,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":231,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Chlamydiae; Tropism; Tissue tropism; Microbiology; Intracellular parasite; Pathogen; Effector; Immunity; Virology; Immune system; Virulence; Interferon; Human pathogen; Chlamydia trachomatis; Gene; Cell biology; Immunology; Virus; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.04829894973556322,"gpt":0.3467751689378051,"spread":0.2984762192022419,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001441298,0.00009451304,0.0001542722,0.0003656115,0.0003671345,0.00001700795,0.0004893765,0.0001534687,0.000169945],"category_scores_gemma":[0.001108439,0.00006543093,0.00009739299,0.0009653772,0.0007489245,0.0004625989,0.0001739072,0.0003355002,0.000104075],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008444983,"about_ca_system_score_gemma":0.00004520133,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005000363,"about_ca_topic_score_gemma":2.669169e-7,"domain_scores_codex":[0.9988238,0.00001819852,0.0003297452,0.0003024919,0.0003231166,0.0002026972],"domain_scores_gemma":[0.9991213,0.0001026989,0.000240709,0.00001542412,0.0005032149,0.00001663172],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000388988,0.000100776,0.006494269,0.00001270292,0.00002503607,7.39531e-10,0.000256793,0.00004007271,0.9850119,0.004215281,0.001331114,0.002473092],"study_design_scores_gemma":[0.000162521,0.00008707148,0.3892711,0.00002618484,0.000005589153,0.00001165247,0.00002332812,0.00001273154,0.6034958,0.001404916,0.005449827,0.00004921017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9832887,0.0001917145,0.000002140078,0.01052284,0.00008308369,0.0003138156,0.00000904946,0.00002023711,0.005568438],"genre_scores_gemma":[0.9980617,0.00005683342,0.0002737147,0.0002003656,0.0001383028,0.00002162289,2.495487e-7,0.000004318693,0.001242921],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3827769,"threshold_uncertainty_score":0.2823738,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2582447685","doi":"10.1038/mi.2016.129","title":"Association of HPV infection and clearance with cervicovaginal immunology and the vaginal microbiota","year":2017,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":228,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; Women's Health In Women's Hands; Toronto Public Health; Public Health Ontario; University of Toronto","funders":"University of Toronto; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Ontario HIV Treatment Network","keywords":"Microbiome; Immunology; Bacterial vaginosis; Sex organ; HPV infection; Biology; Vagina; Immune system; Medicine; Cervical cancer; Microbiology; Internal medicine; Cancer; Bioinformatics","retraction":null,"screen_n_in":null,"score":{"opus":0.009785938326815366,"gpt":0.262586843390819,"spread":0.2528009050640037,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0008775142,0.0001994895,0.0004293582,0.0001633768,0.0009278602,0.00006787113,0.0002956688,0.0003378665,0.0001933777],"category_scores_gemma":[0.0005061216,0.0001390506,0.00005009717,0.00009805853,0.00317558,0.0002666465,0.000300575,0.0007800114,0.00007956304],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007628979,"about_ca_system_score_gemma":0.00007095489,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002663719,"about_ca_topic_score_gemma":0.000338577,"domain_scores_codex":[0.9982587,0.0005844057,0.000282719,0.0004169633,0.00004704518,0.000410186],"domain_scores_gemma":[0.9981499,0.0003402745,0.0004553737,0.0007451103,0.0002971656,0.00001222641],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.004913772,0.000230966,0.4424853,0.00005160825,0.00243146,0.00000495986,0.000642455,0.000002628572,0.5061651,0.009098963,0.0003575072,0.03361535],"study_design_scores_gemma":[0.00534358,0.0005034435,0.9475585,0.00001391566,0.0001007402,0.0006075945,0.00006000094,0.000002620634,0.03497307,0.0004748858,0.01021745,0.0001441569],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9875342,0.004726726,0.0001056319,0.004411003,0.0005824716,0.0003941845,0.00001113659,0.00004135327,0.002193355],"genre_scores_gemma":[0.9962108,0.001744811,0.00005868018,0.00003686708,0.00003525521,0.0000454922,0.00001173944,0.00001820389,0.001838167],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5050732,"threshold_uncertainty_score":0.9995372,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W912202375","doi":"10.1371/journal.pone.0132776","title":"Self-Collected versus Clinician-Collected Sampling for Chlamydia and Gonorrhea Screening: A Systemic Review and Meta-Analysis","year":2015,"lang":"en","type":"review","venue":"PLoS ONE","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":224,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Public Health Agency of Canada; BC Centre for Disease Control; BC Mental Health & Substance Use Services; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Gonorrhea; Chlamydia; Medicine; Meta-analysis; Confidence interval; Men who have sex with men; Gynecology; Sampling (signal processing); Psychological intervention; Internal medicine; Family medicine; Syphilis; Immunology; Nursing","retraction":null,"screen_n_in":null,"score":{"opus":0.5172068784090351,"gpt":0.4260765275622235,"spread":0.09113035084681159,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002463653,0.0007039023,0.00889495,0.001051552,0.0004193356,0.00007747573,0.0003550074,0.0008401967,0.0002768424],"category_scores_gemma":[0.003241991,0.0005558002,0.00143341,0.002666507,0.0001933979,0.0001102293,0.0002212447,0.00111031,0.0001161109],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000224123,"about_ca_system_score_gemma":0.0005715583,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004934436,"about_ca_topic_score_gemma":0.0000546035,"domain_scores_codex":[0.9948159,0.001608576,0.001421044,0.001385863,0.0001355617,0.0006330205],"domain_scores_gemma":[0.994058,0.002711969,0.0008484304,0.001092581,0.001182045,0.0001069565],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.0001794569,0.0009315863,0.00001247103,0.08630716,0.8919815,0.000002124963,0.00006646009,3.015169e-7,0.00003026918,0.00002727977,0.0009232072,0.01953818],"study_design_scores_gemma":[0.0007055266,0.0002814218,0.000005985347,0.001499468,0.6780968,0.00005335124,0.000009140638,0.000002184517,0.000009718045,0.000003681294,0.3189256,0.0004070686],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0000482892,0.9910288,0.00009788642,0.00007371231,0.00008362371,0.007595733,0.0005542437,0.0001909108,0.0003267392],"genre_scores_gemma":[0.00001085947,0.9883935,0.002723154,0.00002584991,0.00006564926,0.003062452,0.0009457876,0.00009191316,0.004680817],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.3180024,"threshold_uncertainty_score":0.9996893,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2099735862","doi":"10.1093/molbev/msr161","title":"Unity in Variety--The Pan-Genome of the Chlamydiae","year":2011,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":221,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Centre for Disease Control","funders":"Universität Wien; National Institute of Allergy and Infectious Diseases; Austrian Science Fund; World Health Organization","keywords":"Chlamydiae; Biology; Chlamydiales; Plasmid; Genome; Chlamydiaceae; Genetics; Gene; Virulence; Microbiology; Host adaptation; Chlamydia; Virology","retraction":null,"screen_n_in":null,"score":{"opus":0.01658401722709122,"gpt":0.2622679839950314,"spread":0.2456839667679402,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005126682,0.0000722636,0.0001046723,0.00006962961,0.0001508301,0.000001472369,0.0001627141,0.0001846187,0.00006613164],"category_scores_gemma":[0.0002047629,0.00004275813,0.00004404785,0.000241918,0.0008084549,0.00002615573,0.0001112936,0.0003269052,0.00003026329],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000302279,"about_ca_system_score_gemma":0.00004565985,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001013225,"about_ca_topic_score_gemma":0.00009786283,"domain_scores_codex":[0.998857,0.0006226021,0.0001434026,0.0001807928,0.00001416391,0.0001820467],"domain_scores_gemma":[0.9995132,0.00004787722,0.00005414403,0.0003200419,0.00005861673,0.000006118942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005412719,0.00009315673,0.1754815,0.000004783794,0.00005179903,5.112223e-7,0.0002867247,0.000002973596,0.7980257,0.02546873,0.00001339445,0.0005166088],"study_design_scores_gemma":[0.0002251152,0.00009661364,0.9127873,0.000003603041,0.00001173551,0.0000320449,0.00007139792,0.000001328894,0.0762924,0.009585634,0.0008439066,0.00004896046],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994262,0.001945241,0.001612411,0.0002203427,0.0002067702,0.0002222951,0.000006697269,0.000009535222,0.00151467],"genre_scores_gemma":[0.9997017,0.00004133413,0.00002144948,0.00003163204,0.000006798469,0.00002004375,0.000009500845,0.000003929717,0.0001636289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7373058,"threshold_uncertainty_score":0.2978786,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2006934759","doi":"10.1073/pnas.1000086107","title":"At the crossroads of vaginal health and disease, the genome sequence of <i>Lactobacillus iners</i> AB-1","year":2010,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":220,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University; Lawson Health Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Lactobacillus; Vagina; Gene; Genetics; Whole genome sequencing; Microbiology; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.04933501071202358,"gpt":0.3483706724356987,"spread":0.2990356617236751,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.002472446,0.00007499257,0.0001459478,0.00009642539,0.0004523565,0.000009864628,0.0007741106,0.00006158677,0.00003689995],"category_scores_gemma":[0.001480576,0.00003538408,0.00005520926,0.0005419565,0.007285016,0.0002056924,0.0002615,0.000382076,0.000001954742],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002541682,"about_ca_system_score_gemma":0.0001969796,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006565782,"about_ca_topic_score_gemma":0.000001000044,"domain_scores_codex":[0.99898,0.00002857415,0.0002962886,0.0002138202,0.000315692,0.0001656291],"domain_scores_gemma":[0.9987554,0.0002840785,0.0004752941,0.00002918412,0.000430839,0.00002523508],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004922202,0.00004352546,0.02865478,0.00005046921,0.00002431389,1.404144e-9,0.0003473772,0.00001468049,0.951373,0.01854389,0.0005470499,0.0003517085],"study_design_scores_gemma":[0.0002924209,0.0001763968,0.5185942,0.00004324084,0.00001619939,0.00005439677,0.0004156991,0.00001808675,0.455676,0.01798437,0.006647591,0.00008137333],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983288,0.001293563,3.518781e-7,0.01368723,0.00005125098,0.0002559419,0.00008536269,0.000003912562,0.001334367],"genre_scores_gemma":[0.9990373,0.0001584187,0.00004280659,0.000171852,0.00002388366,0.00001020343,6.012979e-7,0.000002440911,0.0005524633],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.495697,"threshold_uncertainty_score":0.9954166,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1993768789","doi":"10.1128/iai.73.10.6407-6418.2005","title":"Comparative Genomic Analysis of<i>Chlamydia trachomatis</i>Oculotropic and Genitotropic Strains","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":219,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Chlamydia trachomatis; Lymphogranuloma venereum; Virology; Genome; Sexually transmitted disease; Genetics; Single-nucleotide polymorphism; Gene; Genotype","retraction":null,"screen_n_in":null,"score":{"opus":0.03055585670781148,"gpt":0.3146210406300704,"spread":0.2840651839222589,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002428532,0.0001382931,0.000383757,0.0005303169,0.0003104428,0.00002467596,0.00006094105,0.0001307691,0.0005082331],"category_scores_gemma":[0.00006276991,0.0001288132,0.00009302695,0.0005202158,0.0004275708,0.0002039436,0.00006143538,0.0004127572,0.00005633774],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005370522,"about_ca_system_score_gemma":0.00003151611,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001432986,"about_ca_topic_score_gemma":0.0006436819,"domain_scores_codex":[0.9988632,0.0004079024,0.0002800102,0.0002277015,0.00003384236,0.0001874011],"domain_scores_gemma":[0.9993346,0.0001244139,0.0001104884,0.0002749295,0.0001282644,0.00002733187],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004034771,0.0003381394,0.398661,0.00001940762,0.002605699,2.803636e-7,0.001645402,0.0003082591,0.5731334,0.0004520169,0.00006929466,0.02272682],"study_design_scores_gemma":[0.0005143192,0.0001146962,0.9755263,0.000004207337,0.0003828032,0.00003211066,0.0001345517,0.0001065236,0.0201864,0.00002773437,0.00285849,0.000111806],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957268,0.001810103,0.0004217913,0.00005448574,0.0001127308,0.0002065833,0.00002680343,0.00004729654,0.001593361],"genre_scores_gemma":[0.9988469,0.0005853912,0.00007940318,0.0000172038,0.00002537361,0.00001650802,0.0000467176,0.000006464747,0.0003759997],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5768654,"threshold_uncertainty_score":0.5564796,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2803721377","doi":"10.1111/1471-0528.15299","title":"Vaginal microbiome in early pregnancy and subsequent risk of spontaneous preterm birth: a case–control study","year":2018,"lang":"en","type":"article","venue":"BJOG An International Journal of Obstetrics & Gynaecology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":216,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Lactobacillus crispatus; Lactobacillus gasseri; Bacterial vaginosis; Lactobacillus; Gardnerella vaginalis; Lactobacillus acidophilus; Microbiome; Biology; Microbiology; Obstetrics; Medicine; Gynecology; Bacteria; Bioinformatics; Probiotic; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01791674421493075,"gpt":0.3013445529610307,"spread":0.2834278087461,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001025585,0.0001828911,0.0004471532,0.001687067,0.00009727116,0.00003568341,0.0005118024,0.0001965464,0.0006518626],"category_scores_gemma":[0.002748396,0.0001640616,0.00009697904,0.0003954064,0.0004814224,0.0003319164,0.0001061403,0.0006716413,0.00002641561],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003726369,"about_ca_system_score_gemma":0.0002141126,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002895424,"about_ca_topic_score_gemma":0.0002401682,"domain_scores_codex":[0.9973513,0.0009664085,0.0008716757,0.0003416846,0.0001454576,0.0003234665],"domain_scores_gemma":[0.995974,0.001389852,0.0007276704,0.0002827221,0.001572371,0.00005335994],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006773945,0.001953842,0.9113194,0.000009822936,0.001111974,0.01330886,0.002317923,0.00002868647,0.01392156,0.0000885245,0.000008544047,0.05525349],"study_design_scores_gemma":[0.005672351,0.007033433,0.9514596,0.00001866866,0.00009670093,0.03293081,0.0004021195,0.00001074464,0.001832379,0.0001634426,0.0002404786,0.0001392615],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926808,0.002124835,0.0001425176,0.0000323836,0.004246403,0.0004513219,0.0001172981,0.000009575997,0.000194843],"genre_scores_gemma":[0.9994127,0.0001580434,0.0001620869,0.00001083,0.00007923673,0.00001168374,0.000003353263,0.00001776497,0.0001443168],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05511424,"threshold_uncertainty_score":0.7137439,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2066364915","doi":"10.1001/jama.2012.176575","title":"Neisseria gonorrhoeae Treatment Failure and Susceptibility to Cefixime in Toronto, Canada","year":2013,"lang":"en","type":"article","venue":"JAMA","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":216,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Public Health Ontario; Toronto Public Health","funders":"","keywords":"Cefixime; Medicine; Neisseria gonorrhoeae; Internal medicine; Retrospective cohort study; Gonorrhea; Cephalosporin; Antibiotics; Microbiology; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.008873436865693581,"gpt":0.2613630327586232,"spread":0.2524895958929296,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001248228,0.0001142882,0.0001652472,0.00003828167,0.000073583,0.00002897467,0.00008279761,0.0001049929,0.003996513],"category_scores_gemma":[0.0001624661,0.00009366486,0.00001940995,0.00009114351,0.00005085558,0.0001887087,0.0000499584,0.0001332832,0.0003390015],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001140938,"about_ca_system_score_gemma":0.0002113052,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.966975,"about_ca_topic_score_gemma":0.986397,"domain_scores_codex":[0.9990664,0.0001326016,0.0001481916,0.0003410829,0.00001232778,0.0002994716],"domain_scores_gemma":[0.9994171,0.0000860545,0.00002015964,0.0003477029,0.00008656974,0.00004237362],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001335248,0.0003946724,0.3013819,0.00001700163,0.0001238688,0.000003325989,0.0007327787,0.00001111567,0.5293507,0.0002911591,0.02664594,0.1409141],"study_design_scores_gemma":[0.0007348253,0.0002691869,0.8910714,0.000004738607,0.000003702224,0.00002529114,0.0007427512,0.000001350713,0.01293844,0.00003917815,0.09406076,0.0001083759],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922618,0.000555901,0.000002337963,0.003078673,0.000195161,0.0005755403,0.00001433903,0.00001909966,0.003297172],"genre_scores_gemma":[0.9957062,0.00002376956,0.00005218906,0.00008317009,0.00003279505,0.0001354315,0.00001804558,0.000007869658,0.003940546],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5896896,"threshold_uncertainty_score":0.996914,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2810934340","doi":"10.1186/s40168-018-0502-8","title":"Increased richness and diversity of the vaginal microbiota and spontaneous preterm birth","year":2018,"lang":"en","type":"article","venue":"Microbiome","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":212,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"B.C. Women's Hospital & Health Centre; University of Toronto; Women's Health Research Institute; University of British Columbia; Lunenfeld-Tanenbaum Research Institute; University of Saskatchewan","funders":"Canadian Institutes of Health Research; Genome British Columbia; University of Saskatchewan","keywords":"Gardnerella vaginalis; Lactobacillus crispatus; Lactobacillus gasseri; Biology; Lactobacillus; Bacterial vaginosis; Pyrosequencing; Mollicutes; Microbiome; Vaginal flora; Physiology; Microbiology; Bioinformatics; Mycoplasma; Bacteria; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01070258879160962,"gpt":0.2369795937683533,"spread":0.2262770049767436,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002759892,0.0001361684,0.0001899343,0.0001458121,0.000539769,0.00001654873,0.0002429366,0.0001324583,0.0002179436],"category_scores_gemma":[0.00006639109,0.00009968525,0.00004165624,0.0002583004,0.001862548,0.00006958498,0.0008282796,0.0002062273,0.00006328242],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003800043,"about_ca_system_score_gemma":0.00004138696,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005220135,"about_ca_topic_score_gemma":0.00005294853,"domain_scores_codex":[0.99902,0.0002015268,0.0001497404,0.000346694,0.00002606352,0.0002559976],"domain_scores_gemma":[0.999272,0.00008300334,0.0000803557,0.0003956631,0.0001481567,0.00002078648],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001602375,0.0000796064,0.05467938,0.00003663075,0.00009173379,0.000007759757,0.0004612848,3.283295e-8,0.9430619,0.0000322283,0.0004587877,0.0009304154],"study_design_scores_gemma":[0.0009619705,0.0002463683,0.3740751,0.00003246559,0.00004260605,0.004445654,0.0000777388,4.199975e-7,0.6029661,0.00005500136,0.01693934,0.0001572674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980817,0.0006923248,0.000009579441,0.0001532511,0.0002872448,0.0002876311,0.0001144782,0.00002612356,0.0003476465],"genre_scores_gemma":[0.998014,0.0000316162,0.00005201616,0.00003967376,0.00002613222,0.000002666397,0.000009395553,0.000009609051,0.001814868],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3400958,"threshold_uncertainty_score":0.6862637,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2103488787","doi":"10.1086/506621","title":"The Association of <i>Atopobium vaginae</i> and <i>Gardnerella vaginalis</i> with Bacterial Vaginosis and Recurrence after Oral Metronidazole Therapy","year":2006,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":209,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Population and Public Health","funders":"","keywords":"Gardnerella vaginalis; Bacterial vaginosis; Metronidazole; Gynecology; Vaginal flora; Vaginitis; Biology; Medicine; Gastroenterology; Internal medicine; Microbiology; Antibiotics","retraction":null,"screen_n_in":null,"score":{"opus":0.004476395995604342,"gpt":0.2266175448875286,"spread":0.2221411488919243,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009061007,0.0001423665,0.0002459011,0.00009782863,0.0003078678,0.00006353053,0.0001318892,0.00006386342,0.00003859413],"category_scores_gemma":[0.0001488385,0.00007215443,0.00006151298,0.0001963482,0.0004695323,0.0001902001,0.00004351035,0.0003202188,0.000003851731],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007490928,"about_ca_system_score_gemma":0.0001066168,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002817944,"about_ca_topic_score_gemma":0.0001041317,"domain_scores_codex":[0.998558,0.0006663864,0.000299947,0.0001238097,0.0001207344,0.0002310549],"domain_scores_gemma":[0.9982007,0.0006832512,0.0004332827,0.0001982977,0.0004582853,0.00002624522],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002044622,0.0003723676,0.9512405,0.00001820466,0.0005460433,0.000002656008,0.0001935483,0.0000196981,0.03860086,0.0001800253,0.002650615,0.004130799],"study_design_scores_gemma":[0.003307944,0.001563465,0.9283132,0.00005435222,0.0004031063,0.0005265895,0.0002033718,7.05673e-7,0.04224936,0.001488137,0.02170048,0.0001893064],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.986361,0.01223631,0.00004930355,0.0004915544,0.0003470531,0.0001866809,0.00002487878,0.00001179843,0.0002913683],"genre_scores_gemma":[0.9960059,0.003666911,0.000006365588,0.00003022079,0.0001085026,0.00001159167,0.000003091705,0.00001156551,0.0001558809],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02292737,"threshold_uncertainty_score":0.2942373,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2592025411","doi":"10.1093/jac/dkx067","title":"WGS to predict antibiotic MICs for Neisseria gonorrhoeae","year":2017,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":207,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Public Health Agency of Canada","funders":"National Institutes of Health; Public Health England; National Institute for Health Research Health Protection Research Unit; National Institute for Health and Care Research; NIHR Oxford Biomedical Research Centre; University of Oxford; Wellcome Trust; Medical Research Council; Wellcome","keywords":"Neisseria gonorrhoeae; Microbiology; Antibiotics; Neisseriaceae; Gonorrhea; Neisseria; Medicine; Biology; Virology; Bacteria; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02266240566377975,"gpt":0.326455008098976,"spread":0.3037926024351963,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007210809,0.0001877724,0.0004333598,0.0002382401,0.0005319826,0.0001451315,0.0007365291,0.0001975511,0.0001772538],"category_scores_gemma":[0.0004227383,0.0001600548,0.0002826168,0.00007120447,0.0001866217,0.0003115771,0.00005713634,0.000379771,0.0001372255],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008334256,"about_ca_system_score_gemma":0.0001924091,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003508378,"about_ca_topic_score_gemma":0.00000941811,"domain_scores_codex":[0.9987921,0.00006207219,0.000463266,0.0002578141,0.00002759489,0.0003971198],"domain_scores_gemma":[0.9982288,0.00009264691,0.0005321037,0.0006072671,0.0004830708,0.00005606891],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00131226,0.0002965909,0.004417083,0.00002528992,0.0003193611,0.000001608236,0.0001619252,0.00003138001,0.9501323,0.00005278191,0.03383045,0.009419004],"study_design_scores_gemma":[0.002994333,0.000860255,0.02534684,0.00007542373,0.00003470902,0.0004936856,0.00002779404,0.000003007516,0.7862852,0.0000581453,0.1836388,0.0001818591],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882268,0.000168987,0.00196096,0.006400584,0.002256516,0.0004979625,0.00003468472,0.00001903991,0.0004344109],"genre_scores_gemma":[0.9945273,0.0002657121,0.002535688,0.0004857012,0.0004874465,0.000002237552,0.00000683666,0.00004498569,0.001644059],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1638471,"threshold_uncertainty_score":0.6526843,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}