{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":6,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":6,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"c6f03a579d32","filters":{"venue":"Advances in Biological Chemistry"}},"results":[{"id":"W2041660100","doi":"10.4236/abc.2013.32023","title":"Cancer induction pathways and HF-EMF irradiation","year":2013,"lang":"en","type":"article","venue":"Advances in Biological Chemistry","topic":"Electromagnetic Fields and Biological Effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Innovation, Science and Economic Development Canada; Association pour la Recherche Thérapeutique Anti-Cancéreuse","keywords":"Inflammation; NADPH oxidase; Cancer; Reactive oxygen species; Cell biology; Cancer cell; Chemistry; Signal transduction; Epigenome; Transcription factor; Cancer research; p38 mitogen-activated protein kinases; Biology; Biochemistry; Immunology; MAPK/ERK pathway; Gene expression; Gene; Genetics","authors":[{"name":"Gérard Ledoigt","is_ca":false},{"name":"D Belpomme","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00799667508842573,"gpt":0.2402701107195026,"spread":0.2322734356310769,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007736347,0.0001397458,0.0001312949,0.000008753477,0.00003962823,0.00001491114,0.0001014029,0.0003314183,0.0001554152],"category_scores_gemma":[0.000133952,0.00009731264,0.00003219863,0.00007283215,0.0001283178,0.000009715339,0.00006763366,0.0001531496,0.000004528654],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001325025,"about_ca_system_score_gemma":0.0000116949,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002258613,"about_ca_topic_score_gemma":0.000006861035,"domain_scores_codex":[0.9991478,0.00003339755,0.0001563756,0.0003725124,0.00005072917,0.0002392016],"domain_scores_gemma":[0.9997044,0.00002821273,0.0000543778,0.0001179448,0.00003025213,0.00006481205],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000198006,0.00003151931,0.01390814,0.00001636208,0.000003515041,8.961866e-7,0.000003559102,0.00001040369,0.9438187,0.00003650994,0.00008386956,0.04206665],"study_design_scores_gemma":[0.001006948,0.001904362,0.1447103,0.00005019513,0.000008010215,0.00003498729,0.00009008013,0.0001947487,0.8275202,0.006593639,0.01718949,0.0006970243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9881414,0.009517522,0.00004462963,0.0002032359,0.00005667573,0.000150423,0.000004696947,0.00001653409,0.001864896],"genre_scores_gemma":[0.988975,0.00988373,0.0003069596,0.0003112831,0.0002063273,0.0001443725,0.00006255479,0.000005015658,0.0001047049],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1308022,"threshold_uncertainty_score":0.3968295,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2062010371","doi":"10.4236/abc.2015.52009","title":"The Unexpected Existence of Coding and Non-Coding Fragments along the Eukaryotic Gene","year":2015,"lang":"en","type":"article","venue":"Advances in Biological Chemistry","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics; Università di Catania","keywords":"DNA methylation; Biology; Gene; DNA; CpG site; Promoter; Methylation; Molecular biology; Genetics; genomic DNA; Gene expression","authors":[{"name":"Pietro Volpe","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02767939620767555,"gpt":0.2898738687251451,"spread":0.2621944725174695,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002275583,0.0001009997,0.0001013887,0.000006638512,0.00008525889,0.00001307592,0.000258932,0.0001008626,0.000003794509],"category_scores_gemma":[0.0002236401,0.00005469026,0.0000293855,0.0001056902,0.0002678667,0.0000053068,0.0001351719,0.00009683582,5.21291e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000151342,"about_ca_system_score_gemma":0.00002428358,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000358031,"about_ca_topic_score_gemma":0.000003987193,"domain_scores_codex":[0.9992469,0.00004082641,0.0002054534,0.0002513088,0.00009547596,0.0001600161],"domain_scores_gemma":[0.9994857,0.00004691146,0.0001143638,0.0002484268,0.00005236784,0.00005221161],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006165906,0.0000166439,0.01932763,0.000009999007,0.000005468183,8.123101e-7,0.00003201023,0.00003956078,0.9782858,0.00003414104,0.00007983103,0.00210642],"study_design_scores_gemma":[0.0003687713,0.00005619836,0.01150397,0.00002834894,0.000003387728,0.000008014629,0.0007114515,0.0001109101,0.981516,0.0003702229,0.005213774,0.0001089384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882909,0.008787386,0.0009586035,0.0001466437,0.00008714308,0.00009606507,0.000003406289,0.000005051019,0.001624798],"genre_scores_gemma":[0.994906,0.004546108,0.0002345193,0.00006067376,0.00007533183,0.00003143439,0.00002329816,0.00000450849,0.0001180895],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00782366,"threshold_uncertainty_score":0.2230204,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1998276795","doi":"10.4236/abc.2012.22015","title":"Two disulfide mutants in domain I of &amp;lt;i&amp;gt;Bacillus thuringiensis&amp;lt;/i&amp;gt; Cry3Aa δ-endotoxin increase stability with no effect on toxicity","year":2012,"lang":"en","type":"article","venue":"Advances in Biological Chemistry","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Genome British Columbia; University of Victoria","keywords":"Cysteine; Mutant; Bacillus thuringiensis; Guanidine; Chemistry; Wild type; Covalent bond; Thermal stability; Protein secondary structure; Denaturation (fissile materials); Circular dichroism; Helix (gastropod); Biophysics; Stereochemistry; Biochemistry; Biology; Organic chemistry; Genetics; Enzyme; Gene","authors":[{"name":"Sheng‐Jiun Wu","is_ca":false},{"name":"Álvaro M. Flórez","is_ca":false},{"name":"Bradley J. Homoelle","is_ca":false},{"name":"Donald H. Dean","is_ca":false},{"name":"Óscar Álzate","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0189347415313461,"gpt":0.2924437469866119,"spread":0.2735090054552657,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001572669,0.0006096435,0.000839923,0.00006004157,0.0001007652,0.00002763697,0.0006006563,0.0005633271,0.0004737396],"category_scores_gemma":[0.002347404,0.0004361727,0.0002067195,0.0003988754,0.0008187367,0.00003725288,0.0004157091,0.0005674108,0.00005219759],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001632364,"about_ca_system_score_gemma":0.00007965328,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003684438,"about_ca_topic_score_gemma":0.0003942369,"domain_scores_codex":[0.9960663,0.0004526931,0.0007526508,0.001070284,0.0004510237,0.001207074],"domain_scores_gemma":[0.9976344,0.0004424156,0.0002634513,0.001085933,0.0001620318,0.0004118448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003803361,0.0006946229,0.07022776,0.0002005495,0.00003240303,0.000007272176,0.00004420822,0.00004167768,0.9223933,0.00002076798,0.00001905432,0.002515084],"study_design_scores_gemma":[0.003224179,0.0007015991,0.01590884,0.0002007026,0.0000176493,0.00003739385,0.00001995339,0.000002506651,0.9232011,0.0002062694,0.05563742,0.0008423716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895717,0.002988011,0.0002558527,0.00002260726,0.0001399047,0.0005597762,0.0002681635,0.00003180506,0.006162195],"genre_scores_gemma":[0.9957585,0.0008661523,0.002163794,0.00006597899,0.0003548838,0.0001336948,0.0004795274,0.00003697773,0.0001405202],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05561836,"threshold_uncertainty_score":0.999809,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2998277092","doi":"10.4236/abc.2019.96015","title":"Enzymatic Hydrolysis of Hairtail Surimi in an Ultra-High Pressure Bioreactor","year":2019,"lang":"en","type":"article","venue":"Advances in Biological Chemistry","topic":"Microbial Inactivation Methods","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University","funders":"","keywords":"Papain; Chemistry; Hydrolysis; Amino acid; Protease; Trypsin; Chromatography; Enzymatic hydrolysis; Enzyme; Proteases; Bioreactor; Digestion (alchemy); Biochemistry; Organic chemistry","authors":[{"name":"Deqing Yang","is_ca":false},{"name":"Rong Liu","is_ca":false},{"name":"Yongsheng Wang","is_ca":false},{"name":"OU Min-rui","is_ca":true},{"name":"Junjie Gu","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.011789083987075,"gpt":0.2898678258321723,"spread":0.2780787418450973,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002767905,0.0001768875,0.0003147491,0.00002907182,0.00001092481,0.00000622498,0.000313426,0.0003366951,0.0002372854],"category_scores_gemma":[0.0002913873,0.0001467961,0.0000659865,0.0001790902,0.0001251321,0.00001663655,0.00004534649,0.0001713246,0.000003503947],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001671838,"about_ca_system_score_gemma":0.00002697095,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002310052,"about_ca_topic_score_gemma":0.00001577379,"domain_scores_codex":[0.9987269,0.0001231108,0.0003738602,0.0004606072,0.0000825703,0.00023292],"domain_scores_gemma":[0.9992567,0.00007542464,0.000164121,0.0004051072,0.0000473518,0.00005129086],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001123408,0.0001461994,0.07121589,0.00009460618,0.000009205128,0.000001192756,0.00001536287,0.0006071051,0.9270315,0.00001998536,0.000007170098,0.0007394006],"study_design_scores_gemma":[0.0004630508,0.0001309309,0.007093381,0.00003089012,0.000004454329,0.000002760881,0.00006187503,0.00003168035,0.9875475,0.000209382,0.004231615,0.0001925191],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996745,0.001405365,0.000116543,0.00001837766,0.00005442548,0.0001560328,0.00003683768,0.00001027037,0.001457148],"genre_scores_gemma":[0.9969758,0.0004654368,0.00202945,0.00005960606,0.00005392724,0.00001944628,0.0002058357,0.00001116058,0.0001793105],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06412251,"threshold_uncertainty_score":0.5986173,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4312820028","doi":"10.4236/abc.2022.126021","title":"Ionic Liquid Efficiency on Wood Dissolution and Polysaccharide Identification","year":2022,"lang":"en","type":"article","venue":"Advances in Biological Chemistry","topic":"Lignin and Wood Chemistry","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université du Québec à Trois-Rivières","funders":"","keywords":"Dissolution; Polysaccharide; Ionic liquid; Hemicellulose; Chemistry; Pulp and paper industry; Biomass (ecology); Polymer; Pectin; Chemical engineering; Cell wall; Cellulose; Chromatography; Organic chemistry; Food science; Biochemistry; Biology","authors":[{"name":"Idelette Plazanet","is_ca":false},{"name":"Christelle Gady","is_ca":false},{"name":"Sabine Lhernould","is_ca":false},{"name":"Rachida Zerrouki","is_ca":true},{"name":"Daniel Montplaisir","is_ca":true},{"name":"Guy Costa","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007437408703658672,"gpt":0.2254350926492962,"spread":0.2179976839456376,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001025924,0.0001107547,0.0001036212,0.00001416548,0.00008557552,0.000009844336,0.0001549698,0.00006618642,0.00006322748],"category_scores_gemma":[0.00003440265,0.0001021256,0.00002573501,0.0001447136,0.00005653394,0.00005528955,0.00007097709,0.0002579712,0.000003827243],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001023922,"about_ca_system_score_gemma":0.000005041473,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":5.447461e-7,"about_ca_topic_score_gemma":1.473892e-7,"domain_scores_codex":[0.9992789,0.00001132227,0.0001804623,0.0002400207,0.0001009753,0.000188332],"domain_scores_gemma":[0.9997293,0.00004988722,0.00003082346,0.0001423903,0.000005689382,0.00004194002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002188811,0.00005964213,0.0004112456,0.00004866488,0.000003003718,0.00000498497,0.00002938118,0.005017068,0.9933879,0.00008240086,0.00005698823,0.000876869],"study_design_scores_gemma":[0.0002171798,0.00006857548,0.0002282373,0.0000145456,0.000002529074,0.0000151916,0.0001505956,0.001046599,0.9951103,0.0004836825,0.002457987,0.000204542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914458,0.004252833,0.00006114092,0.00004147094,0.0001148063,0.00005251365,0.00001803473,0.0001423886,0.003870977],"genre_scores_gemma":[0.9987546,0.0009629889,0.00003088987,0.0000277775,0.00005198479,0.00006805144,0.00003319185,0.000007285374,0.00006321674],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007308778,"threshold_uncertainty_score":0.4164562,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1984671066","doi":"10.4236/abc.2012.22017","title":"SSINCC: Simple separation of interacting nucleoprotein complex components","year":2012,"lang":"en","type":"article","venue":"Advances in Biological Chemistry","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"Canadian Institutes of Health Research; University of Waterloo; University of Toronto","keywords":"Nucleoprotein; DNA; Computational biology; Biology; Partition (number theory); Biophysics; Chemistry; Genetics; Mathematics","authors":[{"name":"Roderick Slavcev","is_ca":true},{"name":"Nafiseh Nafissi","is_ca":true},{"name":"Tranum Kaur","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0232628468846206,"gpt":0.3114856208888503,"spread":0.2882227740042297,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001296047,0.000121687,0.000157738,0.000009032814,0.000031969,0.000005617186,0.0001644595,0.0001383202,0.00006601151],"category_scores_gemma":[0.00009896544,0.0001063204,0.00005358163,0.00005312589,0.0000898578,0.000009428524,0.0001310327,0.00009031912,0.000003204981],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001938662,"about_ca_system_score_gemma":0.000007512635,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000473467,"about_ca_topic_score_gemma":0.000002533501,"domain_scores_codex":[0.9992177,0.00002699779,0.0002730435,0.0001897459,0.00005968787,0.0002328339],"domain_scores_gemma":[0.9995658,0.00002387796,0.0001517012,0.0001771843,0.00002843779,0.00005299535],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004077926,0.0001065407,0.0582679,0.00003231179,0.000006200026,3.491232e-7,0.00001669295,0.0001871856,0.9396477,0.00002810229,0.00002292565,0.001643298],"study_design_scores_gemma":[0.000526785,0.0001008087,0.0357013,0.00002928865,0.000004616425,0.00001694323,0.0001902147,0.001228347,0.932563,0.0004071125,0.02892598,0.0003056294],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949529,0.0009116716,0.0006109775,0.00001163772,0.0000471213,0.00008006945,0.00002082182,0.000007254577,0.003357512],"genre_scores_gemma":[0.9969237,0.0002697355,0.002161924,0.0000400143,0.0001208468,0.00001117246,0.0004370631,0.000007981671,0.00002759615],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02890305,"threshold_uncertainty_score":0.4335622,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}