{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":16,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":16,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"1c0d6ab591e4","filters":{"venue":"Antiviral chemistry & chemotherapy"}},"results":[{"id":"W1983656219","doi":"10.1177/095632020601700601","title":"Five Years of Progress on Cyclin-Dependent Kinases and other Cellular Proteins as Potential Targets for Antiviral Drugs","year":2006,"lang":"en","type":"review","venue":"Antiviral chemistry & chemotherapy","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Cyclin-dependent kinase; Biology; Kinase; Drug discovery; Herpes simplex virus; Virology; Bioinformatics; Cancer; Virus; Cell biology; Cell cycle; Genetics","authors":[{"name":"Mireille R. St.Vincent","is_ca":true},{"name":"Jonathan J Lacasse","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01145301758752667,"gpt":0.3057544798200297,"spread":0.2943014622325031,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002230228,0.000678004,0.001129125,0.00006112386,0.00007894773,0.00005978297,0.0005284886,0.0008959359,0.00001766591],"category_scores_gemma":[0.00004488531,0.0006254702,0.0007731746,0.0001301376,0.0004804957,0.000006049752,0.0001513528,0.0003685487,0.000006457858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003059076,"about_ca_system_score_gemma":0.0002198695,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003823985,"about_ca_topic_score_gemma":9.066924e-7,"domain_scores_codex":[0.9971623,0.00008107825,0.0005885363,0.001120604,0.0004323981,0.0006151171],"domain_scores_gemma":[0.9986772,0.00002979943,0.0004237388,0.0006463461,0.0001111507,0.0001117463],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003265688,0.0004724714,0.000006210216,0.006150835,0.0004041056,0.00002698783,0.00001815532,1.586109e-7,0.4455951,0.00001005179,0.0009049281,0.5460843],"study_design_scores_gemma":[0.0008473629,0.0002961002,0.00000127569,0.0007990762,0.0001105006,0.000009100966,0.00001015509,0.000002583668,0.6123689,0.00003879421,0.3850437,0.0004724967],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.07240953,0.9226716,0.00008680206,0.00005410671,0.00007835704,0.002243744,0.0006920978,0.00003489937,0.001728911],"genre_scores_gemma":[0.07178875,0.918197,0.0007620474,0.0001998746,0.001236321,0.0005352033,0.002028797,0.0003037572,0.004948225],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.5456119,"threshold_uncertainty_score":0.9996197,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2326074019","doi":"10.1177/095632020401500302","title":"Clinical Utility of Current NNRTIs and Perspectives of New Agents in This Class under Development","year":2004,"lang":"en","type":"review","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Valeant Pharmaceuticals International; Bristol-Myers Squibb; Boehringer Ingelheim","keywords":"Nucleoside Reverse Transcriptase Inhibitor; Reverse transcriptase; Dosing; Protease inhibitor (pharmacology); Virology; Reverse-transcriptase inhibitor; Pharmacology; Human immunodeficiency virus (HIV); ANTIRETROVIRAL AGENTS; Medicine; Biology; Antiretroviral therapy; Viral load; Genetics; RNA","authors":[{"name":"Zhi‐Jun Zhang","is_ca":false},{"name":"Robert Hamatake","is_ca":false},{"name":"Zhi Hong","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1243724358799134,"gpt":0.4137304869345004,"spread":0.289358051054587,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003318973,0.0005532899,0.00244574,0.00009607481,0.00002573261,0.000008180528,0.0001716854,0.000404583,0.0004478077],"category_scores_gemma":[0.00004123309,0.0004424751,0.0004871306,0.0003158388,0.0002602431,0.00004489733,0.00007486134,0.0005040848,0.000009906506],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002723178,"about_ca_system_score_gemma":0.002075159,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001501385,"about_ca_topic_score_gemma":0.000003124263,"domain_scores_codex":[0.9971625,0.00005418845,0.001388201,0.0007052781,0.0003797999,0.0003100191],"domain_scores_gemma":[0.998704,0.00008832267,0.0005743402,0.0004041584,0.00007774323,0.0001514216],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009656732,0.00139953,0.008774019,0.01777824,0.0008398574,0.00001670278,0.001248106,1.061147e-8,0.00002867004,0.000006824337,0.0007839156,0.9690276],"study_design_scores_gemma":[0.006349781,0.00008217363,0.007276914,0.03880522,0.0007334417,0.00002901124,0.0002980382,0.000002109034,0.009437346,0.00007762277,0.9361725,0.0007358384],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.02612113,0.9708664,0.00001623148,0.0001522305,0.00005897727,0.0007116177,0.00001444644,0.00002390537,0.002035026],"genre_scores_gemma":[0.01419359,0.9801219,0.0009555179,0.00001432316,0.00008467088,0.00001938261,0.0001188274,0.00005022742,0.004441522],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9682917,"threshold_uncertainty_score":0.9998027,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2313954337","doi":"10.1177/095632020401500401","title":"Potential of 4′-C-Substituted Nucleosides for the Treatment of HIV-1","year":2004,"lang":"en","type":"review","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Ottawa Hospital Research Institute","keywords":"Human immunodeficiency virus (HIV); Stereochemistry; Chemistry; Pharmacology; Virology; Medicine","authors":[{"name":"Hiroyuki Hayakawa","is_ca":false},{"name":"Satoru Kohgo","is_ca":false},{"name":"Kenji Kitano","is_ca":false},{"name":"Noriyuki Ashida","is_ca":false},{"name":"Eiichi Kodama","is_ca":false},{"name":"Hiroaki Mitsuya","is_ca":false},{"name":"Hiroshi Ohrui","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02344232340043917,"gpt":0.310387022912384,"spread":0.2869446995119448,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007463942,0.0005892018,0.002052821,0.0000545205,0.00007034819,0.00001134875,0.0002079767,0.0003107103,0.0001449004],"category_scores_gemma":[0.00001154827,0.0003440332,0.001395127,0.0002292522,0.0002343751,0.00003061628,0.00001350256,0.0001091449,0.00001260782],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002398847,"about_ca_system_score_gemma":0.0006051309,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001039563,"about_ca_topic_score_gemma":5.300519e-7,"domain_scores_codex":[0.9982346,0.0000136655,0.0007581054,0.0004217102,0.0002669616,0.0003049059],"domain_scores_gemma":[0.9985873,0.0001299908,0.0005358531,0.0005748832,0.0001089305,0.00006300906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003363336,0.002284653,0.00006093835,0.02852865,0.005275625,0.00003890264,0.0003428769,8.371325e-7,0.003754796,0.00002137537,0.0007048412,0.9586502],"study_design_scores_gemma":[0.004330694,0.0001752279,0.00001346174,0.007046894,0.003545384,0.00004668842,0.00003932571,0.000005154071,0.1059557,0.00002151717,0.8785018,0.0003182058],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001660728,0.9952023,0.00009836148,0.0003114029,0.00008192599,0.001840037,0.0002271292,0.00004212806,0.0005360107],"genre_scores_gemma":[0.001746428,0.9883187,0.001098976,0.00001105115,0.0002603889,0.0001930483,0.0006759107,0.00008844494,0.007607091],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9583319,"threshold_uncertainty_score":0.9999012,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2036804791","doi":"10.1177/095632020501600305","title":"Inhibition of Hepatitis B Virus Gene Expression and Replication by Helioxanthin and its Derivative","year":2005,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Sunnybrook Health Science Centre","funders":"","keywords":"Hepatitis B virus; Nucleoside; Virology; Lamivudine; Biology; Nucleoside analogue; DNA; Virus; Molecular biology; Biochemistry","authors":[{"name":"Ying Li","is_ca":false},{"name":"Lei Fu","is_ca":true},{"name":"Hosup Yeo","is_ca":false},{"name":"Juliang Zhu","is_ca":false},{"name":"Chen‐Kung Chou","is_ca":false},{"name":"Yueh-Hsiung Kou","is_ca":false},{"name":"Sheau-Farn Yeh","is_ca":false},{"name":"Elizabeth A. Gullen","is_ca":false},{"name":"David Austin","is_ca":false},{"name":"Yung‐Chi Cheng","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01191378309670658,"gpt":0.2687079380968992,"spread":0.2567941550001926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001069615,0.0001771104,0.0003027311,0.00002359504,0.00007552686,0.00001042513,0.00003286665,0.0001180517,0.00005730083],"category_scores_gemma":[0.0000856736,0.000167843,0.00003258136,0.0001196709,0.0001001972,0.0001543506,0.00003731306,0.0001144573,0.000003347817],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004030598,"about_ca_system_score_gemma":0.00002227211,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001726777,"about_ca_topic_score_gemma":0.00001818441,"domain_scores_codex":[0.9989874,0.00001662784,0.0002745963,0.000381336,0.0001791881,0.0001608997],"domain_scores_gemma":[0.9993932,0.00003293594,0.0001547873,0.0002297193,0.0001276215,0.00006170147],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008940208,0.00009965681,0.02549305,0.0001302802,0.00003283445,0.000002153895,0.0005680331,4.82375e-8,0.9632785,0.00000250405,0.001435729,0.008867848],"study_design_scores_gemma":[0.001136145,0.00007527893,0.01202504,0.0001764997,0.00001870241,0.0000162742,0.00002117269,0.0000958399,0.9847672,0.00002642821,0.001494332,0.0001470909],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951613,0.002552788,0.00009388736,0.001087755,0.000007856123,0.0002251221,0.0000551312,0.00004664065,0.0007695245],"genre_scores_gemma":[0.9819451,0.01581124,0.001170047,0.000510655,0.0001128526,0.00002413839,0.00006468979,0.00002574622,0.0003355501],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02148874,"threshold_uncertainty_score":0.6844437,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2049579004","doi":"10.3851/imp1443","title":"Factors Affecting Template Usage in the Development of K65R Resistance in Subtype C Variants of HIV Type-1","year":2009,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Reverse transcriptase; Template; DNA; Nucleotide; Molecular biology; Genetics; RNA; Mutation; Gene","authors":[{"name":"Dimitrios Coutsinos","is_ca":true},{"name":"Cédric Invernizzi","is_ca":true},{"name":"Hongtao Xu","is_ca":true},{"name":"Bluma Brenner","is_ca":true},{"name":"Mark A. Wainberg","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02272376542692057,"gpt":0.2800671230437076,"spread":0.257343357616787,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000316111,0.0001422642,0.0002590981,0.00004032364,0.0000435114,0.000004561638,0.000221278,0.0001212526,0.0001101529],"category_scores_gemma":[0.00004897212,0.00009912386,0.0000451889,0.0002642044,0.00007976773,0.00004193354,0.00001306551,0.0001980736,0.00001254235],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004021706,"about_ca_system_score_gemma":0.00009444854,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001775185,"about_ca_topic_score_gemma":0.00006394631,"domain_scores_codex":[0.9991038,0.00007294655,0.0002959537,0.0001912471,0.00005950307,0.000276496],"domain_scores_gemma":[0.9995045,0.0001422363,0.0001127802,0.000204722,0.00002674041,0.000008989809],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003150459,0.0003459606,0.06215488,0.0000494685,0.00005162425,0.00001052353,0.003318802,2.941777e-7,0.9314744,0.000006265407,0.0001405134,0.002132153],"study_design_scores_gemma":[0.0009530752,0.00004190254,0.2972745,0.00007181548,0.000002324277,0.000001373278,0.0002878859,1.417633e-7,0.7008229,0.00002702909,0.0004477508,0.00006924116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949273,0.0005674845,0.000005060017,0.00009223667,0.000016757,0.0001377858,0.00001195163,0.000007989103,0.004233416],"genre_scores_gemma":[0.9990469,0.00005832129,0.0001221518,0.00001957603,0.0000055541,0.000002286202,0.00006417164,0.000006759145,0.0006742458],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2351196,"threshold_uncertainty_score":0.4042154,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1988861859","doi":"10.1177/095632020001100405","title":"Drug Resistance and Drug Combination Features of the Human Immunodeficiency Virus Inhibitor, BCH-10652 [(±)-2′-Deoxy-3′-Oxa-4′-Thiocytidine, dOTC]","year":2000,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BioPhage Pharma (Canada)","funders":"","keywords":"Zidovudine; Zalcitabine; Virology; Lamivudine; Didanosine; Biology; Pharmacology; Chemistry; Virus; Viral disease","authors":[{"name":"Debra L. Taylor","is_ca":false},{"name":"Parvin S. Ahmed","is_ca":false},{"name":"A.S. Tyms","is_ca":false},{"name":"L. Wood","is_ca":false},{"name":"Lisa A. Kelly","is_ca":false},{"name":"Philip Chambers","is_ca":false},{"name":"John Clarke","is_ca":false},{"name":"Jean Bédard","is_ca":true},{"name":"Terry L. Bowlin","is_ca":true},{"name":"Robert F. Rando","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00462799010712656,"gpt":0.2320911297943271,"spread":0.2274631396872006,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001764314,0.0003508494,0.0004382875,0.00003786846,0.0002825602,0.00003849084,0.0002181425,0.0001212457,0.0002969005],"category_scores_gemma":[0.00001580401,0.0002580783,0.0001749313,0.0003275425,0.0003118349,0.0001177309,0.00003785529,0.0002954653,0.00001153821],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001072476,"about_ca_system_score_gemma":0.00009551403,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005275357,"about_ca_topic_score_gemma":0.0000182725,"domain_scores_codex":[0.998307,0.00003848135,0.0004132178,0.0004503861,0.0004640859,0.0003268589],"domain_scores_gemma":[0.999104,0.00004509765,0.0001784445,0.0005154732,0.00009165287,0.00006536015],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003231402,0.0008905808,0.01196712,0.0003358398,0.0001881051,0.00002094022,0.002424152,2.845808e-7,0.9597659,0.000143929,0.01435148,0.00958856],"study_design_scores_gemma":[0.00360774,0.00001818387,0.01915069,0.0004360354,0.00007034306,0.00001582761,0.0001452557,0.000003866718,0.9640266,0.0002792229,0.01197384,0.0002723929],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9611707,0.002218175,0.000001050802,0.003531374,0.00004704567,0.000367425,0.00001471204,0.00007270672,0.0325768],"genre_scores_gemma":[0.8486062,0.000816091,0.000162636,0.0001772709,0.00006366135,0.00001831823,0.00005019732,0.00003711086,0.1500685],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1174917,"threshold_uncertainty_score":0.9999871,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2021855902","doi":"10.1177/095632020501600502","title":"<i>In Vitro</i> Activity of SPD754, a New Deoxycytidine Nucleoside Reverse Transcriptase Inhibitor (NRTI), against 215 HIV-1 Isolates Resistant to Other NRTIs","year":2005,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Boehringer Ingelheim (Canada)","funders":"","keywords":"Didanosine; Abacavir; Zidovudine; Nucleoside Reverse Transcriptase Inhibitor; Lamivudine; Reverse transcriptase; Virology; Reverse-transcriptase inhibitor; Stavudine; Deoxycytidine; Zalcitabine; Deoxycytidine kinase; Resistance mutation; Biology; Human immunodeficiency virus (HIV); Virus; Viral load; Sida; Chemotherapy; Polymerase chain reaction; Viral disease; Biochemistry; Gemcitabine; Antiretroviral therapy","authors":[{"name":"Richard C. Bethell","is_ca":true},{"name":"Yolanda Lie","is_ca":false},{"name":"Neil Parkin","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008584953640573333,"gpt":0.2439034641049165,"spread":0.2353185104643431,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001803603,0.00048315,0.0007740495,0.0001332045,0.00005559494,0.00002268862,0.0001749514,0.0002029819,0.0004196491],"category_scores_gemma":[0.00003301006,0.0004460261,0.0002838671,0.0005634489,0.00008704336,0.0002259678,0.00002886885,0.0002747646,0.0001038955],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002789822,"about_ca_system_score_gemma":0.0002633815,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009020259,"about_ca_topic_score_gemma":0.00002507422,"domain_scores_codex":[0.9978549,0.00002900223,0.0005731165,0.0006287644,0.0003505768,0.0005636668],"domain_scores_gemma":[0.9989265,0.0000416468,0.000164595,0.0005115771,0.0000626148,0.0002930828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004124481,0.0008839045,0.001530784,0.0001408358,0.0001723285,0.00007556679,0.001004448,0.000001904677,0.9488553,0.000001681879,0.03103713,0.01217158],"study_design_scores_gemma":[0.005503068,0.00007117017,0.0004162193,0.0002841289,0.0000583019,0.0000105944,0.00007228057,0.0000491403,0.8538786,0.000009128259,0.1392908,0.00035654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9730224,0.0002782221,0.00006552013,0.02150905,0.00004349582,0.0005294655,0.00008725835,0.00008591517,0.00437866],"genre_scores_gemma":[0.9532642,0.0002142133,0.005318855,0.002792809,0.0004067964,0.00002517063,0.00004606514,0.0000938872,0.03783804],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1082537,"threshold_uncertainty_score":0.9997991,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2001744429","doi":"10.1177/095632020401500402","title":"Mutations and Polymorphisms Associated with Antiretroviral Drugs in HIV-1C-Infected African Patients","year":2004,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Fogarty International Center; National Institutes of Health","keywords":"Stavudine; Didanosine; Resistance mutation; Nevirapine; Efavirenz; Zidovudine; Lamivudine; Virology; Reverse transcriptase; Reverse-transcriptase inhibitor; Biology; Viral load; Regimen; Medicine; Internal medicine; Virus; Viral disease; Antiretroviral therapy; Polymerase chain reaction; Genetics; Gene","authors":[{"name":"Florence Doualla‐Bell","is_ca":true},{"name":"S. Gaseitsiwe","is_ca":false},{"name":"Thumbi Ndung’u","is_ca":false},{"name":"Musetsanagepe Modukanele","is_ca":false},{"name":"Trevor Peter","is_ca":false},{"name":"Vladimir Novitsky","is_ca":false},{"name":"Ndwapi Ndwapi","is_ca":false},{"name":"Tendani Gaolathe","is_ca":false},{"name":"Ava Avalos","is_ca":false},{"name":"W. C. Wester","is_ca":false},{"name":"Hermann Bussmann","is_ca":false},{"name":"Peter Cardiello","is_ca":false},{"name":"Richard Marlink","is_ca":false},{"name":"Howard Moffat","is_ca":false},{"name":"Ibou Thior","is_ca":false},{"name":"Mark A. Wainberg","is_ca":true},{"name":"Max Essex","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.004590197695708283,"gpt":0.2143922775556601,"spread":0.2098020798599518,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006295173,0.0002895079,0.000372275,0.00007637123,0.00008185196,0.00002804307,0.00006168802,0.0001211555,0.00005660175],"category_scores_gemma":[0.00003026552,0.0002411784,0.0000609083,0.0004639428,0.0001546866,0.0001168945,0.00001681259,0.000186739,0.00001311667],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002532946,"about_ca_system_score_gemma":0.0001517434,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004676449,"about_ca_topic_score_gemma":0.000009873602,"domain_scores_codex":[0.99871,0.00001419772,0.0002532837,0.0003777875,0.0002818163,0.0003629288],"domain_scores_gemma":[0.9995056,0.00002871562,0.0001126171,0.0001754656,0.00007171685,0.0001058462],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002691722,0.001184646,0.9720015,0.00003146773,0.0002168093,0.00005225425,0.002047866,0.000001120691,0.02183292,0.00001045364,0.000110971,0.002240823],"study_design_scores_gemma":[0.02462302,0.0003372886,0.6771303,0.0004070816,0.0001118189,0.00001556021,0.0003426616,0.00003113818,0.2960984,0.0001049532,0.0002568385,0.0005409109],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939016,0.00004120984,0.00001343987,0.001507147,0.00001328851,0.0003042966,0.00002396115,0.0001007645,0.004094367],"genre_scores_gemma":[0.9952667,0.00003621768,0.0003906007,0.0001697381,0.00003238012,0.00002398062,0.000525444,0.00004381821,0.003511168],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2948712,"threshold_uncertainty_score":0.9834968,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2014399345","doi":"10.1177/095632020701800201","title":"Apricitabine: A Novel Deoxycytidine Analogue Nucleoside Reverse Transcriptase Inhibitor for the Treatment of Nucleoside-Resistant HIV Infection","year":2007,"lang":"en","type":"review","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Boehringer Ingelheim (Canada); McGill University; Jewish General Hospital","funders":"","keywords":"Reverse-transcriptase inhibitor; Pharmacology; Nucleoside Reverse Transcriptase Inhibitor; Emtricitabine; Nucleoside analogue; Nucleoside; Reverse transcriptase; Lamivudine; Deoxycytidine kinase; Didanosine; Resistance mutation; Zalcitabine; Biology; Virology; Deoxycytidine; Chemotherapy; Virus; Biochemistry; RNA","authors":[{"name":"Mark A. Wainberg","is_ca":true},{"name":"Pedro Cahn","is_ca":false},{"name":"Richard C. Bethell","is_ca":true},{"name":"J. Sawyer","is_ca":false},{"name":"Susan Cox","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04955322289353962,"gpt":0.3322231562892709,"spread":0.2826699333957313,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002902156,0.001062011,0.002472322,0.0002079581,0.000192215,0.0000350118,0.0002020322,0.0005515512,0.0001324956],"category_scores_gemma":[0.00003870023,0.0006793664,0.001882994,0.0007856882,0.0002158146,0.00007994841,0.00001624253,0.0002878629,0.00002180983],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007045132,"about_ca_system_score_gemma":0.0004579104,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006857642,"about_ca_topic_score_gemma":0.00001303171,"domain_scores_codex":[0.9968051,0.00002769045,0.001286296,0.0008178394,0.0004352473,0.0006278209],"domain_scores_gemma":[0.9978809,0.0003198567,0.0006450199,0.0008052185,0.0001762508,0.0001727136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001823489,0.006209542,0.0002609233,0.02379612,0.006628526,0.0001203226,0.0007117476,4.922713e-7,0.03810285,0.00003999819,0.01199272,0.9103132],"study_design_scores_gemma":[0.00561719,0.0003679673,0.0000399807,0.004062474,0.003453675,0.00006218082,0.00004151733,0.00001479386,0.05904878,0.000003586588,0.9267457,0.0005421761],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.004144322,0.9879849,0.0005534178,0.0009131012,0.0002433372,0.004297453,0.0008066849,0.0001611884,0.0008955874],"genre_scores_gemma":[0.001436437,0.9828216,0.001564945,0.0001192834,0.0007518517,0.0004028045,0.001371416,0.0002021236,0.01132951],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.914753,"threshold_uncertainty_score":0.9995658,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2329003397","doi":"10.1177/095632020701800205","title":"Kinetics of Inhibition of HIV Type 1 Reverse Transcriptase-Bearing NRTI-associated Mutations by Apricitabine Triphosphate","year":2007,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Reverse transcriptase; Resistance mutation; Biology; Primer (cosmetics); Nucleotidyltransferase; Reverse-transcriptase inhibitor; Mutation; Molecular biology; Virology; Nucleoside Reverse Transcriptase Inhibitor; Wild type; Nucleoside; Mutant; Chemistry; RNA; Genetics; Gene","authors":[{"name":"Fernando A Frankel","is_ca":true},{"name":"Dimitrios Coutsinos","is_ca":true},{"name":"Hongtao Xu","is_ca":true},{"name":"Mark A. Wainberg","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009658679323601324,"gpt":0.2477513750349181,"spread":0.2380926957113168,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001483408,0.0001895398,0.0003738993,0.00004677801,0.00002815268,0.00000449179,0.00005154774,0.0001324922,0.0001927133],"category_scores_gemma":[0.00004000798,0.0001819934,0.0001236532,0.000435296,0.00009901169,0.00005600535,0.00000734888,0.0001189542,0.00000646657],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009001033,"about_ca_system_score_gemma":0.00003870852,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001651575,"about_ca_topic_score_gemma":0.000001313868,"domain_scores_codex":[0.9987999,0.000009166695,0.000473336,0.0002091237,0.0002671042,0.0002413554],"domain_scores_gemma":[0.9993387,0.00003635857,0.0002109718,0.0001700205,0.0001761028,0.00006777133],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000330746,0.0008184274,0.01339138,0.0001303506,0.0002018419,0.00001606922,0.0004648134,6.735954e-7,0.9793714,0.00000356846,0.003871163,0.001399575],"study_design_scores_gemma":[0.004215291,0.00009446395,0.003950581,0.0001760415,0.0001189982,0.000003942698,0.00016898,0.00001827345,0.988768,0.00002114393,0.002317532,0.000146745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947629,0.00032043,0.0002954567,0.0006466719,0.00003154546,0.0002101941,0.00005171107,0.00004527667,0.00363579],"genre_scores_gemma":[0.9901114,0.000211191,0.0008546754,0.00009938492,0.00002814091,0.000003134864,0.0006431623,0.00003032485,0.00801866],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009440795,"threshold_uncertainty_score":0.7421476,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4318460047","doi":"10.1177/20402066231152971","title":"The development of BVDU: An odyssey","year":2023,"lang":"en","type":"review","venue":"Antiviral chemistry & chemotherapy","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Varicella zoster virus; Nucleoside analogue; Famciclovir; Thymidine kinase; Herpes simplex virus; Deoxyuridine; Valaciclovir; Virology; Penciclovir; Biology; Virus; Herpesviridae; Nucleoside; Biochemistry; DNA; Viral disease","authors":[{"name":"Erik De Clercq","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07637125898134986,"gpt":0.3978522472895007,"spread":0.3214809883081509,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002514865,0.0004270999,0.001169853,0.00004021801,0.0002076516,0.00002958273,0.0002213409,0.0003205421,0.00009274537],"category_scores_gemma":[0.00002424882,0.0002621256,0.0004433361,0.0003778622,0.0001218802,0.00003822328,0.00003903107,0.000321602,0.0001387534],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000138156,"about_ca_system_score_gemma":0.0006891142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001034311,"about_ca_topic_score_gemma":0.000006234109,"domain_scores_codex":[0.9982614,0.00003093376,0.0007159665,0.0003969557,0.0002684039,0.0003263595],"domain_scores_gemma":[0.998729,0.0001019865,0.0003247944,0.0006782509,0.00007135398,0.00009460307],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001466785,0.0002221311,0.00001728219,0.005317706,0.000865452,0.00001148289,0.00006920943,7.183408e-9,0.0001198638,0.000003306394,0.0002250847,0.9931338],"study_design_scores_gemma":[0.0004523143,0.00003678695,0.00001614399,0.003740701,0.000317594,0.00002280771,0.00002615737,0.000001087845,0.008738571,0.00001282691,0.9864113,0.0002236613],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.005472598,0.9841092,0.000009886932,0.00003489356,0.0001317687,0.0007284333,0.00003171827,0.0001839501,0.009297571],"genre_scores_gemma":[0.0003750183,0.9910927,0.0003303165,0.00002020257,0.000230674,0.0001087135,0.0002264922,0.0001179753,0.007497915],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9929101,"threshold_uncertainty_score":0.9999831,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2109240928","doi":"10.1177/2040206614566580","title":"Identification of a dibenzocyclooctadiene lignan as a HIV-1 non-nucleoside reverse transcriptase inhibitor","year":2015,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"Plant-derived Lignans Synthesis and Bioactivity","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Lignan; Reverse transcriptase; Reverse-transcriptase inhibitor; Nucleoside Reverse Transcriptase Inhibitor; Enzyme; Human immunodeficiency virus (HIV); Biology; Nucleoside; Mechanism of action; In vitro; EC50; Drug; Virology; Pharmacology; Chemistry; Biochemistry; Stereochemistry; Viral disease; Antiretroviral therapy; Sida; Viral load; RNA","authors":[{"name":"Ying-Shan Han","is_ca":true},{"name":"Wei‐Lie Xiao","is_ca":false},{"name":"Hongtao Xu","is_ca":true},{"name":"Victor G. Kramer","is_ca":true},{"name":"Yudong Quan","is_ca":true},{"name":"Thibault Mésplède","is_ca":true},{"name":"Maureen Oliveira","is_ca":true},{"name":"Susan P. Colby-Germinario","is_ca":true},{"name":"Han‐Dong Sun","is_ca":false},{"name":"Mark A. Wainberg","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00906468489302717,"gpt":0.2314458601651324,"spread":0.2223811752721052,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003116948,0.0003054856,0.00033637,0.00003849205,0.00006027542,0.00003263799,0.0003123374,0.0002757346,0.00002594706],"category_scores_gemma":[0.00005933638,0.0002945876,0.0002249777,0.0001742191,0.0001759945,0.00002135411,0.00004322208,0.0001208824,0.000024662],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002918068,"about_ca_system_score_gemma":0.0001482369,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005104993,"about_ca_topic_score_gemma":0.000003554297,"domain_scores_codex":[0.9983819,0.00004242952,0.0004350999,0.0005471469,0.0002602104,0.0003332132],"domain_scores_gemma":[0.9988774,0.00001120635,0.0002724892,0.000551522,0.000129757,0.0001575985],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004283997,0.0003158577,0.001048509,0.00006519509,0.00008942397,0.000008549747,0.000204329,0.000001738564,0.9909567,0.000002676603,0.004906285,0.001972369],"study_design_scores_gemma":[0.001264059,0.0001431667,0.0003769816,0.00005048084,0.00003423289,0.0000266306,0.0002747361,0.00004274193,0.9817103,0.00004059989,0.01569565,0.000340432],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961377,0.0002262214,0.0003026719,0.0003244974,0.00008807171,0.0001967688,0.0001547113,0.00002610723,0.002543264],"genre_scores_gemma":[0.996927,0.0002628633,0.0002222895,0.0002410846,0.0003157413,0.00002041305,0.0001921157,0.00004368952,0.001774855],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01078936,"threshold_uncertainty_score":0.9999506,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2323588417","doi":"10.1177/095632020001100602","title":"Selection of Resistance-Conferring Mutations in HIV-1 by the Nucleoside Reverse Transcriptase Inhibitors (+/-)dOTC and (+/-)dOTFC","year":2000,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; BioPhage Pharma (Canada); Jewish General Hospital","funders":"Medical Research Council Canada","keywords":"Reverse transcriptase; Resistance mutation; Biology; Mutation; Nucleoside; Virology; Nucleotidyltransferase; Virus; Genotype; Molecular biology; Genetics; RNA; Gene","authors":[{"name":"Nathalie Richard","is_ca":true},{"name":"Horacio Salomón","is_ca":true},{"name":"Maureen Oliveira","is_ca":true},{"name":"Robert F. Rando","is_ca":true},{"name":"Tarek S. Mansour","is_ca":true},{"name":"Zhengxian Gu","is_ca":true},{"name":"Mark A. Wainberg","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00566320649577984,"gpt":0.2253073792016228,"spread":0.219644172705843,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001141144,0.0001919181,0.0002645013,0.00003335175,0.00008347008,0.00001562769,0.00005854246,0.00008998822,0.000471761],"category_scores_gemma":[0.000009201144,0.0001535404,0.00007780571,0.0002676373,0.0001358289,0.00009633729,0.000004339228,0.0001729936,0.000009642879],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006957245,"about_ca_system_score_gemma":0.00006191138,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003962657,"about_ca_topic_score_gemma":0.00001974413,"domain_scores_codex":[0.9990043,0.00002080891,0.0003106772,0.0002721801,0.0001772018,0.0002148031],"domain_scores_gemma":[0.9996625,0.00003130779,0.00006513846,0.0001563147,0.00003131715,0.00005340024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006345795,0.0004521347,0.04189411,0.0002100387,0.0001681997,0.00002673449,0.002981378,0.000001233194,0.9126368,0.000009114616,0.02684301,0.0141427],"study_design_scores_gemma":[0.003349735,0.00002367875,0.004973194,0.0002206258,0.00006101775,0.00002054905,0.0004520532,0.00005039246,0.9528354,0.00004801762,0.037786,0.0001792735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9845117,0.0002813411,0.000006429107,0.004342455,0.000012077,0.0002531786,0.00002154451,0.00003671171,0.01053461],"genre_scores_gemma":[0.9616027,0.0004875019,0.0003630551,0.0002151436,0.00004708867,0.00002249193,0.00007392043,0.00002537803,0.03716271],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04019869,"threshold_uncertainty_score":0.6261197,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2077627087","doi":"10.1177/095632020401500504","title":"Variability in the PR and RT Genes of HIV-1 Isolated from Recently Infected Subjects","year":2004,"lang":"en","type":"review","venue":"Antiviral chemistry & chemotherapy","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre; McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; Health Canada; Canadian Foundation for AIDS Research; American Physicians Fellowship for Medicine in Israel; amfAR, The Foundation for AIDS Research","keywords":"Biology; Gene; Reverse transcriptase; Virology; Nucleotide; Protease; Lentivirus; Viral disease; Drug resistance; Virus; Sida; Genetics; Human immunodeficiency virus (HIV); Polymerase chain reaction; Enzyme","authors":[{"name":"Dan Turner","is_ca":true},{"name":"Ariel Roldán","is_ca":true},{"name":"Bluma Brenner","is_ca":true},{"name":"Daniela Moïsi","is_ca":true},{"name":"Jean‐Pierre Routy","is_ca":true},{"name":"Mark A. Wainberg","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01703132076227514,"gpt":0.2871678079767022,"spread":0.270136487214427,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004026665,0.0004563227,0.001231125,0.00004631922,0.00006965731,0.00002107414,0.0003972578,0.000692597,0.0003851106],"category_scores_gemma":[0.00009924913,0.0002975376,0.0002547453,0.0003214878,0.0003544478,0.00004618493,0.00006306434,0.0006485735,0.00008652474],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000102987,"about_ca_system_score_gemma":0.0003482923,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002845365,"about_ca_topic_score_gemma":0.00001126847,"domain_scores_codex":[0.9979376,0.0004845063,0.0005275588,0.0005662404,0.00006903366,0.0004150936],"domain_scores_gemma":[0.9984527,0.0006294282,0.0002604339,0.000586249,0.00004805259,0.00002308863],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003466586,0.001421206,0.003604861,0.007998744,0.001798755,0.00007785198,0.0005514939,5.414652e-8,0.04140596,0.00000900675,0.0004524522,0.942333],"study_design_scores_gemma":[0.005225769,0.0002580873,0.001170559,0.006182302,0.0004868745,0.0001567352,0.00005922202,4.495045e-7,0.06974263,0.0002308581,0.915672,0.0008145002],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.05785203,0.9400865,0.00000563262,0.00005739375,0.00004296699,0.0007011608,0.0005855551,0.00003250393,0.0006362123],"genre_scores_gemma":[0.0563533,0.9406494,0.00002276998,0.00001953954,0.00003363202,0.00006348544,0.00255946,0.00003263419,0.0002657906],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9415185,"threshold_uncertainty_score":0.9999477,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2792985786","doi":"10.1177/2040206618762985","title":"Frequent cross-resistance to rilpivirine among subtype C HIV-1 from first-line antiretroviral therapy failures in South Africa","year":2018,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"AIDS Vancouver","funders":"Bill and Melinda Gates Foundation","keywords":"Rilpivirine; Efavirenz; Virology; Reverse transcriptase; Reverse-transcriptase inhibitor; Nevirapine; Drug resistance; Nucleoside Reverse Transcriptase Inhibitor; Medicine; Resistance mutation; Human immunodeficiency virus (HIV); Viral load; Antiretroviral therapy; Biology; Polymerase chain reaction; Genetics","authors":[{"name":"Kerri J. Penrose","is_ca":false},{"name":"Chanson J. Brumme","is_ca":true},{"name":"Maritsa Scoulos-Hanson","is_ca":false},{"name":"Kristen A. Hamanishi","is_ca":false},{"name":"Kelley C. Gordon","is_ca":false},{"name":"Raquel Viana","is_ca":false},{"name":"Carole L. Wallis","is_ca":false},{"name":"P. Richard Harrigan","is_ca":true},{"name":"John W. Mellors","is_ca":false},{"name":"Urvi M. Parikh","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01393575490856098,"gpt":0.262476883679566,"spread":0.248541128771005,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001695487,0.000576036,0.0007075792,0.0001047321,0.0001625125,0.00009796006,0.0003180893,0.0002432867,0.001077936],"category_scores_gemma":[0.00005001261,0.0004958076,0.0002078736,0.0005853139,0.0003510296,0.0001724252,0.00006113572,0.0002966094,0.0003201313],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002187956,"about_ca_system_score_gemma":0.0001300725,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001011622,"about_ca_topic_score_gemma":0.0001491131,"domain_scores_codex":[0.9972514,0.00002506904,0.0005715392,0.0009143564,0.0004969566,0.0007406923],"domain_scores_gemma":[0.9986778,0.00005699161,0.0001751701,0.0007085579,0.0001502223,0.0002312345],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002089435,0.0006354918,0.8516101,0.00006166298,0.0002744092,0.0001627325,0.005396977,0.000001213033,0.1331648,0.000005762189,0.00451704,0.002080468],"study_design_scores_gemma":[0.007474247,0.0002271314,0.1657835,0.0002986502,0.00002980756,0.000002402586,0.0001324574,0.00003958792,0.7689457,0.0001100954,0.05633606,0.0006204339],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882787,0.0005244559,0.00009023833,0.002908508,0.00009122927,0.0005448681,0.00008632321,0.0001723506,0.007303258],"genre_scores_gemma":[0.9612986,0.0001747928,0.00166389,0.0004829533,0.0007282827,0.00006108399,0.000203511,0.0000953081,0.0352916],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6858266,"threshold_uncertainty_score":0.9998352,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4210891386","doi":"10.1177/095632020701800601","title":"Montreal Welcomes 21st ICAR","year":2007,"lang":"en","type":"article","venue":"Antiviral chemistry & chemotherapy","topic":"Clinical practice guidelines implementation","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Pharmacognosy; Biology; Biological activity; In vitro; Genetics","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.06288153535063165,"gpt":0.4141452727979068,"spread":0.3512637374472751,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006574131,0.0002176076,0.0003295213,0.00002968522,0.00006387362,0.00002350039,0.0001218561,0.0001602618,0.0008087126],"category_scores_gemma":[0.0003406329,0.0002004955,0.000186213,0.000208621,0.0001024989,0.0001454055,0.00002849849,0.0003078577,0.000086074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008344861,"about_ca_system_score_gemma":0.00008420987,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002158203,"about_ca_topic_score_gemma":0.00002741002,"domain_scores_codex":[0.9981734,0.00001313478,0.0006919387,0.0003704139,0.0003597728,0.0003914075],"domain_scores_gemma":[0.9987912,0.000313175,0.0002036887,0.000411327,0.0001309752,0.0001496812],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00087171,0.0004278548,0.05618687,0.00008710837,0.0001585498,0.00008140953,0.000132065,2.244471e-7,0.7196522,0.00001771579,0.00866538,0.2137189],"study_design_scores_gemma":[0.004841613,0.0001324565,0.09193069,0.00004594351,0.00009508165,0.00009253459,0.0005857446,0.0000522311,0.8241779,0.000172456,0.07757429,0.0002991283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9391837,0.00009745521,0.0005097915,0.005715567,0.00009798667,0.0002268292,0.000007875113,0.0001517558,0.05400901],"genre_scores_gemma":[0.9897269,0.0002629448,0.001871454,0.004101725,0.000974149,0.000004319576,0.0001112229,0.00004642373,0.002900889],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2134197,"threshold_uncertainty_score":0.8854836,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}