{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":16,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":16,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"9eaed337ef70","filters":{"venue":"Applied Biochemistry and Microbiology"}},"results":[{"id":"W2048123962","doi":"10.1134/s0003683811010212","title":"Strain improvement for enhanced production of cellulase in Trichoderma viride","year":2011,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":45,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Lakehead University","funders":"","keywords":"Cellulase; Trichoderma viride; Solid-state fermentation; Chemistry; Food science; Trichoderma; Fermentation; Strain (injury); Mutant; Extracellular; Enzyme; Microbiology; Biochemistry; Horticulture; Biology","authors":[{"name":"Fei Xu","is_ca":false},{"name":"Jiao Wang","is_ca":false},{"name":"Shiju Chen","is_ca":false},{"name":"Wensheng Qin","is_ca":true},{"name":"Yu Zhang","is_ca":false},{"name":"Hongxin Zhao","is_ca":false},{"name":"Xin‐Hui Xing","is_ca":false},{"name":"He‐Ping Li","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00872732209358207,"gpt":0.1811410059493485,"spread":0.1724136838557664,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008335189,0.00009123942,0.0001122253,0.00003251811,0.00001460926,0.000001361008,0.00004481167,0.0001241564,0.00002005609],"category_scores_gemma":[0.000004316623,0.00008715977,0.00002049394,0.00005247327,0.00006552123,0.00001262357,0.00001428584,0.00006109248,0.000001295834],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001560803,"about_ca_system_score_gemma":0.000007003756,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002617141,"about_ca_topic_score_gemma":8.849416e-7,"domain_scores_codex":[0.9995033,0.000002924384,0.0001634467,0.0001931717,0.00000975025,0.0001274218],"domain_scores_gemma":[0.9998314,0.000005336424,0.00003288671,0.00009599595,0.00001358881,0.00002081824],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000754579,0.00003647737,0.000005442518,0.0003220894,0.00001106875,1.646354e-7,0.0001390649,0.000004565222,0.994294,0.00001688636,0.0002564847,0.004838314],"study_design_scores_gemma":[0.0004535968,0.00003574758,0.0000161123,0.000006221013,0.000006858799,0.000005649826,0.0002154329,0.0000116716,0.9979906,0.00008298704,0.001078055,0.00009706325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981623,0.0001284615,0.0006148633,0.00002661781,0.0001680103,0.00026656,0.00002840438,0.0000324169,0.0005723821],"genre_scores_gemma":[0.9988404,0.00006086592,0.0007669399,0.00001973036,0.00004509101,0.00003333276,0.0000726568,0.000006606286,0.0001543913],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004741251,"threshold_uncertainty_score":0.3554273,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2024177685","doi":"10.1134/s0003683812040138","title":"Biofilm, ice recrystallization inhibition and freeze-thaw protection in an epiphyte community","year":2012,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Polar Research and Ecology","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"","keywords":"Biofilm; Ice nucleus; Bacteria; Microbial population biology; Recrystallization (geology); Biology; Frost (temperature); Microbiology; Chemistry; Epiphyte; Extracellular; Botany; Biochemistry; Nucleation","authors":[{"name":"Zhongqin Wu","is_ca":true},{"name":"Frederick W. K. Kan","is_ca":true},{"name":"Yi‐Min She","is_ca":true},{"name":"Virginia K. Walker","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01544944414090307,"gpt":0.2289272253056233,"spread":0.2134777811647202,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003799796,0.00008734789,0.00009002881,0.00002004697,0.000153038,0.000009654445,0.00005381183,0.0001842531,0.0001423742],"category_scores_gemma":[0.00001795858,0.00008533001,0.000007302452,0.00008548037,0.0002919643,0.0001043086,0.0001512725,0.0002388286,0.00001990087],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004652705,"about_ca_system_score_gemma":0.000004573379,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005401295,"about_ca_topic_score_gemma":0.0005905104,"domain_scores_codex":[0.9993341,0.00009898207,0.0001050428,0.000161966,0.00001892993,0.0002809558],"domain_scores_gemma":[0.9997243,0.00002039945,0.00003883533,0.0001208199,0.000003076527,0.00009261412],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004162986,0.00009188957,0.02326699,0.00001832943,0.000002016384,4.212729e-7,0.0001584195,8.962622e-7,0.9745205,0.00002593236,0.00007695026,0.001796013],"study_design_scores_gemma":[0.0004247292,0.00008693466,0.05434823,0.000005407033,0.000003483372,0.00008836879,0.0002835972,0.00000826135,0.942713,0.0003051443,0.001590393,0.0001424018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983008,0.0000584667,0.00009097941,0.00006140578,0.0000174227,0.0001888608,0.00001702574,0.00001624611,0.001248791],"genre_scores_gemma":[0.9993875,0.00003707211,0.0001731414,0.000119111,0.00002800851,0.00003693238,0.0001760497,0.000004988546,0.00003721157],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03180746,"threshold_uncertainty_score":0.3479657,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2009978309","doi":"10.1134/s0003683813070028","title":"Design of a PCR test based on the gyrA gene sequence for the identification of closely related species of the Bacillus subtilis group","year":2013,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics","keywords":"Bacillus subtilis; Biology; Bacillus licheniformis; Genetics; Identification (biology); Gene; Bacillus amyloliquefaciens; Bacillaceae; Microbiology; Sequence analysis; Computational biology; Bacteria; Botany","authors":[{"name":"L. N. Borshchevskaya","is_ca":false},{"name":"A. N. Kalinina","is_ca":false},{"name":"С. П. Синеокий","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02068521304364828,"gpt":0.1847833352089979,"spread":0.1640981221653496,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002891922,0.00009249199,0.0001248477,0.000003550415,0.0001159383,0.000008323867,0.0003153843,0.0001228281,0.00004117493],"category_scores_gemma":[0.00006147153,0.00002607751,0.00005735143,0.0001295217,0.0005088212,0.000007714561,0.0000504746,0.00007301838,9.777125e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000681764,"about_ca_system_score_gemma":0.000009483129,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001709023,"about_ca_topic_score_gemma":0.000002008351,"domain_scores_codex":[0.9993743,0.00002954718,0.0002773754,0.0001675708,0.00003344144,0.0001178213],"domain_scores_gemma":[0.9988465,0.0006841935,0.0002652713,0.0001252966,0.00006588781,0.00001285479],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000301317,0.00005823343,0.00006045255,0.00001630321,0.00001636927,2.014195e-8,0.00002206969,0.0000100153,0.9985623,0.0004133335,0.0001453363,0.0006654079],"study_design_scores_gemma":[0.0001187718,0.000111163,0.002407649,0.00001093548,0.00002004656,0.000002648614,0.0001292254,0.0001874095,0.9963982,0.0003803289,0.0001802972,0.00005330676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976521,0.0001111591,0.00006598548,0.001201078,0.00002977034,0.0005919504,0.0002357764,0.000004991557,0.0001071712],"genre_scores_gemma":[0.9995704,0.00004407982,0.00007061158,0.0001030222,0.00001484685,0.00003965155,0.00006358172,7.929848e-7,0.00009306671],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002347196,"threshold_uncertainty_score":0.1874773,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2589810788","doi":"10.1134/s0003683817010100","title":"Modeling of anammox process with the biowin software suite","year":2017,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Anammox; Bioreactor; Ammonium; Nitrogen; Wastewater; Activated sludge; Chemistry; Process (computing); Pulp and paper industry; Process engineering; Environmental science; Denitrification; Environmental engineering; Computer science; Engineering; Organic chemistry","authors":[{"name":"А. Г. Дорофеев","is_ca":false},{"name":"Yu. A. Nikolaev","is_ca":false},{"name":"М. Н. Козлов","is_ca":false},{"name":"М. В. Кевбрина","is_ca":false},{"name":"A. M. Agarev","is_ca":false},{"name":"A. Yu. Kallistova","is_ca":false},{"name":"Н. В. Пименов","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006166744699725118,"gpt":0.198472733794446,"spread":0.1923059890947209,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005490169,0.000103037,0.0001051328,0.000003962949,0.0002288361,0.00001548014,0.0002318823,0.00006923049,0.00004259286],"category_scores_gemma":[0.000002676343,0.00005768269,0.00001780765,0.00001884423,0.0004805921,0.0000236295,0.0001279431,0.00005353977,0.000008130507],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008603371,"about_ca_system_score_gemma":0.000006606894,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004975046,"about_ca_topic_score_gemma":0.00001805424,"domain_scores_codex":[0.9995372,0.000004144718,0.00007228248,0.0002106315,0.00002525462,0.0001504566],"domain_scores_gemma":[0.9996437,0.000007961839,0.0000634327,0.0002533336,0.000004445806,0.00002715468],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005834262,0.00001975797,0.002806286,0.00001447891,0.00002190471,0.000002471994,0.00009069747,0.00006736832,0.9963205,0.000004629262,0.00004442494,0.0005491293],"study_design_scores_gemma":[0.0003547643,0.00002559064,0.000192259,0.000005724754,0.00002523925,0.00005224569,0.0001221585,0.00004884,0.998856,0.00006792178,0.0001525522,0.0000966886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989094,0.00004546096,0.00006700592,0.0001256728,0.000007595633,0.00009409984,0.00001396105,0.000009495609,0.0007272867],"genre_scores_gemma":[0.998753,0.000005679377,0.0009485657,0.00003764768,0.00001437794,0.000009438518,0.00002407442,0.000005303063,0.0002019389],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002614027,"threshold_uncertainty_score":0.2352232,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4322700688","doi":"10.1134/s000368380804008x","title":"Degradation of hydrocarbons and their derivatives by a microbial association on the base of Canadian pondweed","year":2008,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Naphthalene; Chemistry; Microbial biodegradation; Pollutant; Biodegradation; Pseudomonas fluorescens; Environmental chemistry; Phenol; Pseudomonas; Elodea canadensis; Microorganism; Botany; Food science; Biology; Organic chemistry; Aquatic plant; Bacteria; Ecology","authors":[{"name":"Yu. A. Tumaikina","is_ca":false},{"name":"O. V. Turkovskaya","is_ca":false},{"name":"В. В. Игнатов","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006635082765114938,"gpt":0.1588460639187838,"spread":0.1522109811536689,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001184966,0.00009660944,0.0001194252,0.0000264869,0.00008594078,0.000002708961,0.00007512446,0.0001312875,0.00009940047],"category_scores_gemma":[0.00003092852,0.00006645147,0.00001844456,0.0001360819,0.0003090842,0.00001189793,0.00003457976,0.00006752832,0.000004248881],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004603491,"about_ca_system_score_gemma":0.0000224725,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002100704,"about_ca_topic_score_gemma":0.0009534457,"domain_scores_codex":[0.9995012,0.00002434095,0.0001475635,0.0001696667,0.00002383675,0.0001333594],"domain_scores_gemma":[0.999649,0.0000756803,0.000137341,0.00008441794,0.000005837008,0.00004768038],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001787962,0.00002306556,0.002497284,0.000003669071,0.00001249229,1.479328e-7,0.000204385,1.356733e-7,0.9910538,0.00001903266,0.006033657,0.0001344965],"study_design_scores_gemma":[0.0002055474,0.00002255424,0.001398122,0.000003572475,0.000004446213,0.000009158801,0.0001051962,0.000001664706,0.9959822,0.0000124513,0.002183123,0.00007191126],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975673,0.00003078469,0.000003156696,0.0006339255,0.00001425747,0.0001095724,0.0002208241,0.00000389909,0.001416277],"genre_scores_gemma":[0.999136,0.00008922927,0.00005000025,0.0003745632,0.000006506825,0.000002052598,0.0001156076,0.00000340269,0.0002225944],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004928497,"threshold_uncertainty_score":0.317565,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2946172770","doi":"10.1134/s0003683819020108","title":"Improving the Thermostability and pH Stability of Aspergillus niger Xylanase by Site-directed Mutagenesis","year":2019,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Key Research and Development Program of China; Graduate Research and Innovation Projects of Jiangsu Province; Priority Academic Program Development of Jiangsu Higher Education Institutions; Petroleum Technology Research Centre","keywords":"Thermostability; Aspergillus niger; Xylanase; Enzyme; Chemistry; Site-directed mutagenesis; Biochemistry; Homology modeling; Active site; Mutagenesis; Directed evolution; Amino acid; Enzyme assay; Mutation; Mutant; Gene","authors":[{"name":"Qiang Li","is_ca":false},{"name":"Tao Wu","is_ca":false},{"name":"Yuting Duan","is_ca":false},{"name":"Jianjun Pei","is_ca":false},{"name":"Linguo Zhao","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.003243110788620978,"gpt":0.1573701482102061,"spread":0.1541270374215851,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001667368,0.0001329644,0.0001607676,0.0000095265,0.00004563616,0.000007060555,0.00007018378,0.0001732,0.0001736126],"category_scores_gemma":[0.000008504462,0.00009429792,0.00002522051,0.00006001036,0.0002250128,0.00001443669,0.00006220398,0.0001163843,0.000005227311],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001724823,"about_ca_system_score_gemma":0.000009076879,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000269588,"about_ca_topic_score_gemma":0.000001414338,"domain_scores_codex":[0.9993771,0.00001872951,0.0001536289,0.0002807886,0.00002049251,0.0001492235],"domain_scores_gemma":[0.999615,0.00004333838,0.00003931827,0.000245626,0.0000213945,0.00003539375],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003777214,0.00001678381,0.00122248,0.0002940841,0.00002077058,1.151175e-7,0.00009143244,6.984181e-7,0.9955453,0.000001616615,0.000186638,0.002582359],"study_design_scores_gemma":[0.0002698941,0.00001376395,0.0002883829,0.000002615664,0.00001261709,0.00001195727,0.000235741,0.00006180872,0.9963115,0.000004106199,0.002669609,0.0001179431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980458,0.001120255,0.00001412831,0.00006648346,0.00007812614,0.0001954274,0.00009991456,0.00007620746,0.0003036384],"genre_scores_gemma":[0.999631,0.0000817069,0.00005915977,0.00005274125,0.00001948508,0.000005328684,0.00007664112,0.000008171651,0.00006577525],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002482971,"threshold_uncertainty_score":0.3845358,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2791958981","doi":"10.1134/s0003683817090046","title":"Aspartic Acid Synthesis by Escherichia coli Strains with Deleted Fumarase Genes as Biocatalysts","year":2017,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics","keywords":"Fumarase; Escherichia coli; Aspartic acid; Gene; Fumaric acid; Strain (injury); Biology; Biochemistry; Chemistry; Amino acid","authors":[{"name":"Д. Д. Дербиков","is_ca":false},{"name":"А. Д. Новиков","is_ca":false},{"name":"T. A. Gubanova","is_ca":false},{"name":"М. Г. Тарутина","is_ca":false},{"name":"I. T. Gvilava","is_ca":false},{"name":"Д. М. Бубнов","is_ca":false},{"name":"А. S. Yanenko","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00408061160604001,"gpt":0.1968115674838621,"spread":0.1927309558778221,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001325526,0.0003132226,0.0002700532,0.00002132566,0.0003228992,0.00006480874,0.0003076352,0.0003549805,0.00002076102],"category_scores_gemma":[0.00006961465,0.0002681222,0.00005033609,0.00004395905,0.0004617668,0.000005053009,0.0001425763,0.000129351,0.00001474533],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001062358,"about_ca_system_score_gemma":0.00006128865,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003729763,"about_ca_topic_score_gemma":0.00001081892,"domain_scores_codex":[0.9986761,0.00001853655,0.0001962951,0.0006948611,0.00003724261,0.0003769479],"domain_scores_gemma":[0.9989534,0.000004186491,0.0001650686,0.0007009667,0.00004961283,0.000126737],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001521573,0.00006114156,0.00006944367,0.00005333422,0.000142105,0.000003854982,0.000009967069,0.000001995172,0.9951909,0.00002038151,0.00127682,0.003017961],"study_design_scores_gemma":[0.0005048779,0.00009853063,0.0001038243,0.00001501362,0.00007233517,0.000165125,0.0000438826,0.000001117548,0.9839367,0.000005067182,0.01468142,0.0003721603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971442,0.001671032,0.0001560982,0.0001855014,0.00009114025,0.0001754198,0.0001221456,0.00003263417,0.0004218936],"genre_scores_gemma":[0.9975627,0.0003996557,0.0004660855,0.0001491909,0.0002532731,0.00006121334,0.0004833798,0.00003032225,0.0005941662],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0134046,"threshold_uncertainty_score":0.9999771,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2077863658","doi":"10.1134/s0003683813080048","title":"Novel biocatalytic process of N-substituted acrylamide synthesis","year":2013,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Potato Plant Research","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics","keywords":"Isopropylamine; Acrylamide; Chemistry; Isopropyl; Yield (engineering); Substrate (aquarium); Nuclear chemistry; Organic chemistry; Chromatography; Polymer; Materials science; Monomer; Biology","authors":[{"name":"К. В. Лавров","is_ca":false},{"name":"G. A. Larikova","is_ca":false},{"name":"А. S. Yanenko","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009291098318695682,"gpt":0.2021985924650244,"spread":0.1929074941463287,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009159902,0.0001294497,0.000193254,0.000008539533,0.00006750319,0.00001570479,0.0002388837,0.0001768526,0.0002475055],"category_scores_gemma":[0.00005878546,0.000053372,0.00003081223,0.0001505015,0.0002931146,0.00002692569,0.00008670377,0.00009762726,0.00003864336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008179649,"about_ca_system_score_gemma":0.00001371338,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001167828,"about_ca_topic_score_gemma":0.00001260132,"domain_scores_codex":[0.9991988,0.000007899869,0.0001746874,0.0002998745,0.00003898895,0.0002797498],"domain_scores_gemma":[0.999493,0.0002457876,0.00007293058,0.00006132384,0.0000532522,0.00007367997],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001746292,0.00005667018,0.0001688391,0.00004317745,0.00001799562,7.057005e-7,0.00001242709,1.555222e-7,0.9914012,0.00005536139,0.0001457832,0.008080203],"study_design_scores_gemma":[0.00009010694,0.00001519279,0.001502445,0.00001390895,0.000008035504,0.00008848233,0.0001552975,0.00000325142,0.9975002,0.00008683161,0.0004097403,0.0001265229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983,0.0001004587,0.000002492003,0.0002405907,0.00001227707,0.0001766101,0.0001347111,0.00002647551,0.001006435],"genre_scores_gemma":[0.9994695,0.00002865493,0.00008133718,0.00005042785,0.00003923385,0.00005987537,0.0001933989,7.687589e-7,0.00007681549],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00795368,"threshold_uncertainty_score":0.2710012,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1983589854","doi":"10.1134/s0003683807030179","title":"Role of transamination in the mobilization of respiratory substrates in germinating seeds of castor oil plants","year":2007,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"GABA and Rice Research","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Winnipeg; University of Manitoba","funders":"","keywords":"Transamination; Castor oil; Biochemistry; Ricinus; Succinate dehydrogenase; Germination; Chemistry; Dehydrogenase; Succinic acid; Metabolism; Enzyme; Biology; Botany","authors":[{"name":"В. Н. Попов","is_ca":false},{"name":"А. Т. Епринцев","is_ca":false},{"name":"Д. Н. Федорин","is_ca":false},{"name":"Oleg Fomenko","is_ca":false},{"name":"Abir U. Igamberdiev","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01117502368538172,"gpt":0.2324243455962279,"spread":0.2212493219108462,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005284614,0.00005069331,0.0001137963,0.000017414,0.00001637063,0.000001369651,0.00009501344,0.0001190175,0.000007893823],"category_scores_gemma":[0.00001142283,0.00002068957,0.00001535539,0.0001755864,0.0001267063,0.000009815758,0.00001167412,0.00006739974,1.011405e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005827366,"about_ca_system_score_gemma":0.00000757447,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007193715,"about_ca_topic_score_gemma":0.0002627897,"domain_scores_codex":[0.9994956,0.000026176,0.0002252272,0.000105353,0.00003350047,0.0001141191],"domain_scores_gemma":[0.9996653,0.0001882708,0.00008595835,0.00002580724,0.00002420862,0.00001050685],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000394469,0.00007170026,0.004260547,0.00005091396,0.000001740573,6.381838e-7,0.0003709301,9.8678e-7,0.9713539,0.00003688479,8.739258e-7,0.02381138],"study_design_scores_gemma":[0.0001233478,0.00004904698,0.08194835,0.00001691488,0.000001396495,0.000005550018,0.003744393,0.000002039397,0.9140252,0.00002701315,0.00002370425,0.00003299153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990383,0.0003346343,3.746818e-7,0.00001553409,0.000003738108,0.00005347648,0.00002233557,0.000001442388,0.0005301322],"genre_scores_gemma":[0.999881,0.00003717995,0.00001010075,0.000007763289,0.00001088242,0.000003175551,0.00004232396,3.115248e-7,0.000007307119],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0776878,"threshold_uncertainty_score":0.09179717,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3137137887","doi":"10.1134/s0003683821020034","title":"Pathogenicity and Lipid Composition of Mycelium of the Fungus Stagonospora cirsii VIZR 1.41 during Submerged Cultivation","year":2021,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Mycelium; Biology; Ergosterol; Fungus; Phosphatidylcholine; Phosphatidylethanolamine; Botany; Sterol; Fatty acid; Food science; Phospholipid; Composition (language); Biochemistry; Cholesterol","authors":[{"name":"Г. М. Фролова","is_ca":false},{"name":"Е. Р. Котлова","is_ca":false},{"name":"С. В. Сокорнова","is_ca":false},{"name":"Svetlana V. Senik","is_ca":false},{"name":"Alexey L. Shavarda","is_ca":false},{"name":"Alexander D. Misharev","is_ca":false},{"name":"Alexander Berestetskiy","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.004470640085098796,"gpt":0.1991822573891238,"spread":0.194711617304025,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000662413,0.00008889096,0.000202215,0.00001138746,0.00007744231,0.000001410519,0.00004089593,0.000186542,0.00001948754],"category_scores_gemma":[0.00001655274,0.00006883342,0.00003925875,0.00009515818,0.0002849619,0.000006406844,0.00007574046,0.0001206102,5.717397e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001033525,"about_ca_system_score_gemma":0.0000390583,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003884126,"about_ca_topic_score_gemma":9.478746e-7,"domain_scores_codex":[0.99944,0.00002029048,0.0002031394,0.0002167201,0.00001830594,0.0001015519],"domain_scores_gemma":[0.9995642,0.0000305922,0.0001231484,0.0001800554,0.00007142149,0.00003053208],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001601118,0.00008719139,0.007015283,0.000201054,0.00004253567,8.901889e-7,0.00006205828,3.284695e-7,0.9919973,0.0002526418,0.00003694275,0.0001436698],"study_design_scores_gemma":[0.0006778849,0.00002080424,0.03346322,0.00002892431,0.00005770131,0.0001504822,0.000140714,7.6249e-7,0.9651718,0.00003419195,0.0001926726,0.00006088281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985976,0.0004878813,0.00002322786,0.0003393282,0.0000282377,0.0001480077,0.0001201252,0.000008695748,0.0002469189],"genre_scores_gemma":[0.9989462,0.0001298433,0.0002041321,0.0001056174,0.00004060753,0.00001098495,0.0004711273,0.00000415272,0.00008733059],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02682554,"threshold_uncertainty_score":0.2806945,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2976120737","doi":"10.1134/s0003683819050041","title":"Pathogenicity and Lipid Composition of Mycelium of the Fungus Stagonospora cirsii VIZR 1.41 Produced on Liquid Media with Different Nitrogen Sources","year":2019,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Mycelium; Food science; Sucrose; Composition (language); Botany; Biology; Fungus; Chemistry; Horticulture","authors":[{"name":"Г. М. Фролова","is_ca":false},{"name":"С. В. Сокорнова","is_ca":false},{"name":"Alexander Berestetskiy","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.003045090604254847,"gpt":0.1653086507114883,"spread":0.1622635601072334,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006739574,0.0002001257,0.0002613405,0.00001732127,0.00004884521,0.000004878376,0.0001397342,0.0001872574,0.000008345131],"category_scores_gemma":[0.000009365672,0.0001304196,0.00005851352,0.00004346884,0.0002613226,0.000001440695,0.0001381925,0.0000850892,6.384745e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005186363,"about_ca_system_score_gemma":0.00003789356,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003244812,"about_ca_topic_score_gemma":0.000002534151,"domain_scores_codex":[0.9991357,0.0000346718,0.00019806,0.0004056206,0.00004670034,0.000179235],"domain_scores_gemma":[0.999377,0.00002838268,0.0001806533,0.0003086904,0.00004683854,0.00005842383],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001601049,0.0001291957,0.008854244,0.0001496507,0.00007923635,7.201324e-7,0.00003944608,0.000003144838,0.9889767,0.00005003287,0.00003238743,0.00008420962],"study_design_scores_gemma":[0.00067704,0.0004271311,0.004532234,0.00004508017,0.00005485399,0.00004686405,0.0001008065,7.88605e-7,0.9937508,0.000008642656,0.000190757,0.0001650169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976777,0.0005955796,0.000006504907,0.00003008025,0.00003819498,0.0002713701,0.001258362,0.000005601443,0.0001165437],"genre_scores_gemma":[0.9987105,0.0001148202,0.00003094913,0.0001018157,0.00006641414,0.00001117873,0.000932697,0.00001159077,0.00002008113],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004774101,"threshold_uncertainty_score":0.5318357,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1977492792","doi":"10.1134/s0003683813010109","title":"Novel NADPH-dependent L-aspartate dehydrogenases from the mesophilic nitrogen-fixing bacteria Rhodopseudomonas palustris and Bradyrhizobium japonicum","year":2013,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics","keywords":"Rhodopseudomonas palustris; Bradyrhizobium japonicum; Biochemistry; Rhodospirillaceae; Enzyme; Citrate synthase; Bacteria; Nitrogen fixation; Rhodospirillales; Amination; Escherichia coli; ATP citrate lyase; Reductive amination; Chemistry; Biology; Rhizobiaceae; Catalysis; Gene","authors":[{"name":"Tatiana M. Kuvaeva","is_ca":false},{"name":"J. I. Katashkina","is_ca":false},{"name":"A. D. Kivero","is_ca":false},{"name":"Sergey V. Smirnov","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008745703552850464,"gpt":0.1760811834444303,"spread":0.1673354798915798,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001721691,0.0003548996,0.0003252083,0.000007653761,0.0003796641,0.0001298742,0.0003750747,0.0003355104,0.0006096771],"category_scores_gemma":[0.00003361058,0.0001477298,0.00007948094,0.0001295573,0.0003513056,0.0000602901,0.0003370113,0.0002432541,0.00008556299],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002192642,"about_ca_system_score_gemma":0.00001645233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001107273,"about_ca_topic_score_gemma":0.0001141858,"domain_scores_codex":[0.9983013,0.00005438495,0.0003263112,0.0007243364,0.00006810521,0.0005255169],"domain_scores_gemma":[0.9990027,0.000462804,0.0001605179,0.0001657839,0.0000462829,0.0001619395],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002907879,0.00004885988,0.00160137,0.000007059639,0.00008536642,0.000002192363,0.00005755875,1.118235e-8,0.9959588,0.00003933467,0.0007833897,0.001386992],"study_design_scores_gemma":[0.0003889412,0.00004164522,0.002831117,0.00001353375,0.0000511557,0.0001445473,0.0004074144,0.000001589336,0.9945605,0.0007788767,0.0004469828,0.0003337454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960564,0.001139504,8.100436e-7,0.001735839,0.00007748691,0.0003608081,0.0004249714,0.00007452555,0.0001296714],"genre_scores_gemma":[0.9974424,0.00004147719,0.0002256514,0.001250617,0.0002957795,0.00008905099,0.0005714401,0.000004629802,0.00007896103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001398336,"threshold_uncertainty_score":0.6675537,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1980128409","doi":"10.1134/s0003683813070065","title":"Amplification of leader proregions as a mean to increase the secretion of antibody fragments in the Pichia pastoris yeast","year":2013,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics","keywords":"Pichia pastoris; Pichia; Saccharomyces cerevisiae; Secretion; Yeast; Immunoglobulin light chain; Antibody; Peptide; Molecular biology; Chemistry; Biochemistry; Biology; Gene; Recombinant DNA; Genetics","authors":[{"name":"O. V. Tyurin","is_ca":false},{"name":"I. I. Gubaydullin","is_ca":false},{"name":"S. E. Cheperegin","is_ca":false},{"name":"B. D. Efremov","is_ca":false},{"name":"Д. Г. Козлов","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008033543876769009,"gpt":0.2552398047623347,"spread":0.2472062608855657,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001891258,0.0001077534,0.0001149394,0.00002630959,0.00004886097,0.00000830929,0.0003273237,0.0001436391,0.00001777728],"category_scores_gemma":[0.0000408449,0.00006808774,0.00003300661,0.0001221602,0.0002361725,0.000001421108,0.0001560414,0.00009918839,0.000009179765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005329828,"about_ca_system_score_gemma":0.00004481608,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001548801,"about_ca_topic_score_gemma":0.00001706415,"domain_scores_codex":[0.9992779,0.00005483269,0.0001937643,0.0002466861,0.0000530322,0.000173823],"domain_scores_gemma":[0.9993953,0.00001973855,0.00007564459,0.0003961929,0.00007239034,0.00004070321],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007394292,0.00007800724,0.0006422533,0.00003980302,0.00002089596,1.866676e-7,0.0003164957,0.000002978504,0.9974637,0.0001195068,0.0008022743,0.0004399749],"study_design_scores_gemma":[0.0002627868,0.0001180267,0.002177094,0.00001200722,0.000009006907,0.00002330341,0.00105233,0.000002468747,0.9935744,0.0001183951,0.002567347,0.0000828475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977885,0.0002123956,0.0001027919,0.0005887654,0.00001669472,0.0004408203,0.0000361923,0.000001899002,0.000811915],"genre_scores_gemma":[0.9989157,0.00007106085,0.0001554679,0.0002238814,0.00005537346,0.00009685072,0.0003135644,0.000006726917,0.0001613414],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003889295,"threshold_uncertainty_score":0.2776538,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2546796218","doi":"10.1134/s0003683816070061","title":"Anaerobic biosynthesis of intermediates of reductive branch of tricarboxylic acids cycle by Escherichia coli strains with inactivated frdAB and sdhAB genes","year":2016,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Population and Public Health","keywords":"Fumarate reductase; Fumaric acid; Biochemistry; Succinic acid; Fermentation; Citric acid cycle; Malate dehydrogenase; Malic acid; Escherichia coli; Fumarase; Glyoxylate cycle; Chemistry; Pyruvate carboxylase; Pyruvate decarboxylase; Mutant; Biology; Metabolism; Gene; Alcohol dehydrogenase; Enzyme; Citric acid","authors":[{"name":"A. Yu. Skorokhodova","is_ca":false},{"name":"A. Yu. Gulevich","is_ca":false},{"name":"В. Г. Дебабов","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.002274915940162507,"gpt":0.1735262696188668,"spread":0.1712513536787043,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009283067,0.000190937,0.0003418978,0.00004099178,0.00002140427,0.000002168211,0.0001047034,0.0002439594,0.000007300364],"category_scores_gemma":[0.00003401852,0.00013349,0.00003678711,0.000118303,0.0006491431,0.000003291874,0.00006718173,0.00005423541,1.680478e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006643145,"about_ca_system_score_gemma":0.00004261678,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000204859,"about_ca_topic_score_gemma":0.000001652671,"domain_scores_codex":[0.9991331,0.00002296959,0.0002666701,0.0003776563,0.00002675653,0.0001728569],"domain_scores_gemma":[0.9994329,0.00001352833,0.0002156414,0.0002173064,0.00007485151,0.00004573452],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000300444,0.00008405845,0.0002325196,0.0001253913,0.0001627672,1.415805e-7,0.00003821892,8.284673e-7,0.9945639,0.00001818868,0.00004822688,0.004425305],"study_design_scores_gemma":[0.0007552836,0.0002505485,0.0004321204,0.00004346188,0.00004812195,0.00002391372,0.0001002105,1.957334e-7,0.9977486,0.00001010979,0.000420451,0.0001669566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981075,0.00130247,0.0001543811,0.00004318879,0.00003041157,0.000131457,0.0001813666,0.000007564305,0.00004164148],"genre_scores_gemma":[0.9983441,0.0009374541,0.0004920929,0.000009674986,0.00005015373,0.00000978066,0.00008578438,0.00001489405,0.00005601642],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004258349,"threshold_uncertainty_score":0.5443565,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1901151965","doi":"10.1134/s0003683815050130","title":"Distiller yeasts producing antibacterial peptides","year":2015,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics; Russian Academy of Sciences","keywords":"Lactobacillus sakei; Recombinant DNA; Yeast; Bacteriocin; Bacteria; Antibacterial activity; Pediococcus acidilactici; Saccharomyces cerevisiae; Fermentation; Chemistry; Microbiology; Antimicrobial peptides; Biology; Biochemistry; Lactobacillus; Lactic acid; Antimicrobial; Gene; Lactobacillus plantarum","authors":[{"name":"E. V. Klyachko","is_ca":false},{"name":"Е. В. Морозкина","is_ca":false},{"name":"Boris T. Zaitchik","is_ca":false},{"name":"S. V. Benevolensky","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01372168549569907,"gpt":0.1953578387890297,"spread":0.1816361532933306,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001127607,0.0001242717,0.0001356303,0.000003613405,0.00007468223,0.00002759113,0.0001122146,0.0001420516,0.00003865532],"category_scores_gemma":[0.0000155059,0.00005178329,0.00002414284,0.00006515912,0.0001227345,0.00001564422,0.0001151494,0.00008114993,0.00001911164],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001158064,"about_ca_system_score_gemma":0.000009751958,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001152495,"about_ca_topic_score_gemma":0.000006405148,"domain_scores_codex":[0.9992988,0.00001075495,0.0001235606,0.0003225518,0.00002299994,0.0002212927],"domain_scores_gemma":[0.9997554,0.00001694831,0.00004864923,0.00005207408,0.00002681787,0.0001001396],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005304218,0.00003496973,0.0003603349,0.000006120306,0.000009030397,0.000001699086,0.0000348161,1.020383e-7,0.9933655,0.00008874976,0.001015478,0.005030116],"study_design_scores_gemma":[0.000296687,0.00009786239,0.001788629,0.000009367796,0.00001084252,0.00009065274,0.0001566493,9.030736e-7,0.9683424,0.0001802272,0.02880317,0.0002226689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970548,0.0001266828,0.000001413995,0.0002802448,0.0001129314,0.00009449874,0.00006318549,0.00003804286,0.002228166],"genre_scores_gemma":[0.998804,0.00001528849,0.0001068256,0.0001511821,0.0003166183,0.000005531123,0.000351525,8.625783e-7,0.0002481193],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02778769,"threshold_uncertainty_score":0.2111661,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W7117111892","doi":"10.1134/s0003683825600034","title":"Response Mechanism of Lactobacillus plantarum under Simulated Digestion Based on Proteomics and Metabolomics Analysis","year":2025,"lang":"en","type":"article","venue":"Applied Biochemistry and Microbiology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; Sinai Health System","funders":"","keywords":"Lactobacillus plantarum; Metabolomics; Proteomics; Probiotic; Digestion (alchemy); Metabolism; Bacteria; Lactobacillus; Mechanism (biology)","authors":[{"name":"Leyi Zhao","is_ca":false},{"name":"Ziqing Cheng","is_ca":false},{"name":"Yuxi Ling","is_ca":false},{"name":"Y. Wu","is_ca":false},{"name":"M. Zhang","is_ca":true},{"name":"H. Yang","is_ca":false},{"name":"Zuming Li","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.005640356688927597,"gpt":0.1949144352292453,"spread":0.1892740785403177,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002036842,0.0001354225,0.0002409056,0.00003100966,0.00008679549,0.00001304277,0.00008613532,0.0002553574,0.00001376157],"category_scores_gemma":[0.0000165667,0.00006419499,0.0000490656,0.0002779346,0.0001197281,0.000007091074,0.00006101948,0.0001003992,4.657231e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001484243,"about_ca_system_score_gemma":0.00001350331,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001374367,"about_ca_topic_score_gemma":0.000008068817,"domain_scores_codex":[0.9993073,0.00003938889,0.0001743425,0.0003010372,0.0000221686,0.0001557269],"domain_scores_gemma":[0.999622,0.0001679391,0.00008116526,0.00006681037,0.00002481232,0.00003725307],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001100229,0.00006177368,0.0001378428,0.00001120132,0.0001258884,5.767923e-7,0.00000552883,0.00008335604,0.9961945,0.001801089,0.000008704392,0.0004693476],"study_design_scores_gemma":[0.0003781879,0.0001260552,0.002076507,0.00001129034,0.0001611419,0.000002640523,0.00006038665,0.000448858,0.9955955,0.0007528763,0.0002591511,0.0001274323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984958,0.00006289314,0.0001859208,0.0006067852,0.0000196434,0.000163498,0.0002459979,0.00001819331,0.0002013293],"genre_scores_gemma":[0.9989431,0.0000305805,0.0001480919,0.0004471271,0.000007161751,0.000004127809,0.0003557717,6.326528e-7,0.00006339386],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001938664,"threshold_uncertainty_score":0.2617796,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}