{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":96,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":96,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"8eefe782f35a","filters":{"venue":"BMC Developmental Biology"}},"results":[{"id":"W2075564625","doi":"10.1186/1471-213x-10-121","title":"A sensitive and bright single-cell resolution live imaging reporter of Wnt/ß-catenin signaling in the mouse","year":2010,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":317,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Royal Victoria Hospital; McGill University Health Centre; Royal Victoria Regional Health Centre","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; National Cancer Institute; New York State Stem Cell Science; Memorial Sloan-Kettering Cancer Center","keywords":"Wnt signaling pathway; Biology; Green fluorescent protein; Reporter gene; WNT3A; Live cell imaging; Cell biology; Transgene; Developmental biology; Beta-catenin; Catenin; Gene; Signal transduction; Genetics; Cell; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.01225737562300963,"gpt":0.2263959100464491,"spread":0.2141385344234395,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005959012,0.0001811883,0.0001768298,0.00007640071,0.00008198687,0.00001944221,0.0001767085,0.0001616082,0.0000259946],"category_scores_gemma":[0.0000727191,0.0001399482,0.00004691659,0.0001074766,0.0002603689,0.00001084746,0.0001430153,0.0001495454,0.000005583042],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002213043,"about_ca_system_score_gemma":0.000141576,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005386495,"about_ca_topic_score_gemma":0.0002898551,"domain_scores_codex":[0.9987237,0.0001148794,0.0003825721,0.0004032991,0.00009698012,0.0002785955],"domain_scores_gemma":[0.999541,0.00004911469,0.0001733432,0.0001184452,0.00007938329,0.00003875617],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008980352,0.000049707,0.05293551,0.00001267623,0.00001583529,0.000007172461,0.0007092575,0.000002242376,0.945416,0.00004779717,0.0002259612,0.0004880096],"study_design_scores_gemma":[0.0005563811,0.00006242159,0.01071941,0.00001360181,0.000009812159,0.0001469069,0.0008931193,0.00001602813,0.9855906,0.0001168499,0.001645191,0.0002296289],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976889,0.0002153891,0.0006722959,0.00006316964,0.0001435977,0.0002102362,0.000008369276,0.000009199925,0.0009887966],"genre_scores_gemma":[0.9889339,0.00002229979,0.01028288,0.000221529,0.00008145737,0.00002879266,0.0001789004,0.00001567649,0.0002345735],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0422161,"threshold_uncertainty_score":0.5706921,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2051952924","doi":"10.1186/1471-213x-7-136","title":"Conserved and divergent patterns of expression of DAZL, VASA and OCT4 in the germ cells of the human fetal ovary and testis","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":239,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"","keywords":"Biology; Germ cell; Andrology; Gonadal ridge; Ovary; Cell biology; Embryogenesis; Endocrinology; Embryo; Genetics; Gene; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.03912882564943094,"gpt":0.2886477456307139,"spread":0.2495189199812829,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005810371,0.00008002312,0.0002151168,0.00003677731,0.00004077197,7.334992e-7,0.0000658639,0.00009016056,0.00001837765],"category_scores_gemma":[0.00008861695,0.00004218736,0.00001936357,0.00005284909,0.0005487756,0.00001907265,0.0001663031,0.0000800999,1.415947e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009475266,"about_ca_system_score_gemma":0.00003170188,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001283924,"about_ca_topic_score_gemma":0.00009389163,"domain_scores_codex":[0.9992535,0.0001173164,0.0002872629,0.000192546,0.00004862531,0.0001007153],"domain_scores_gemma":[0.9995416,0.0001628099,0.0001163421,0.0001240094,0.00003223104,0.00002297536],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002102558,0.00005192124,0.5802037,0.0000508354,0.000008611546,9.562709e-7,0.0004604594,3.904846e-9,0.4185512,0.00002598115,0.000006886475,0.0004291505],"study_design_scores_gemma":[0.0004758306,0.0001002731,0.6946716,0.00003727415,0.000008939227,0.00002629966,0.0003491534,2.865574e-7,0.3041888,0.00008480619,0.00002702746,0.00002965197],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990077,0.0004554487,0.00002545739,0.00003966404,0.00005361655,0.0002773051,0.00001830145,0.000002073611,0.0001204346],"genre_scores_gemma":[0.9993497,0.00004775156,0.0004836835,0.00007320278,0.000009087409,0.000003272876,0.00001190144,0.000002246958,0.00001918874],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1144679,"threshold_uncertainty_score":0.2021987,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2128557797","doi":"10.1186/1471-213x-3-5","title":"Expressionof Drosophila FOXO regulates growth and can phenocopy starvation","year":2003,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"FOXO transcription factor regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":231,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Memorial University of Newfoundland; Banting Research Foundation","keywords":"Biology; Drosophila melanogaster; Forkhead Transcription Factors; Transcription factor; Caenorhabditis elegans; Cell biology; TOR signaling; Phenotype; Phenocopy; Signal transduction; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01522658402101299,"gpt":0.2298419630707592,"spread":0.2146153790497463,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110531,0.0001615248,0.0001201323,0.00005380356,0.0001083384,0.00001659185,0.00008244722,0.0001795,0.00004625609],"category_scores_gemma":[0.0000710079,0.0001520261,0.00003180724,0.00007699851,0.0001244997,0.00001087513,0.00003885019,0.00004587849,0.00000691146],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002399721,"about_ca_system_score_gemma":0.00008728223,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001290914,"about_ca_topic_score_gemma":0.00005096336,"domain_scores_codex":[0.9990674,0.00008223984,0.0002115548,0.0003669737,0.00006429445,0.0002074819],"domain_scores_gemma":[0.9996995,0.00001228144,0.00006114896,0.0001125236,0.00004141096,0.00007316097],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004086294,0.00001994043,0.08080885,0.00001257644,0.00001693285,2.234406e-7,0.00006630464,0.000002851385,0.9121267,0.006495508,0.000162957,0.0002463258],"study_design_scores_gemma":[0.0009058879,0.0001311153,0.07624266,0.00001080382,0.000007352026,0.00003048856,0.0001123185,0.000008655006,0.9050016,0.004441192,0.01281063,0.0002973408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945859,0.0002578357,0.003589227,0.0000611047,0.0001704074,0.0002068714,0.0000207011,0.00002312188,0.001084875],"genre_scores_gemma":[0.9802336,0.00006046714,0.01880748,0.0001901751,0.00004010819,0.00002938732,0.0004745713,0.00001662908,0.0001476453],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01521826,"threshold_uncertainty_score":0.6199445,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1552674655","doi":"10.1186/1471-213x-5-1","title":"Induction of chondro-, osteo- and adipogenesis in embryonic stem cells by bone morphogenetic protein-2: Effect of cofactors on differentiating lineages","year":2005,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":217,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Alberta Heritage Foundation for Medical Research; Bundesministerium für Bildung und Forschung","keywords":"Cell biology; Decorin; Biglycan; Biology; Embryonic stem cell; Stem cell; Cartilage; Bone morphogenetic protein 2; Osteoblast; Bone morphogenetic protein; Cellular differentiation; Adipogenesis; Proteoglycan; Extracellular matrix; Anatomy; Biochemistry; Mesenchymal stem cell; Gene; In vitro","retraction":null,"screen_n_in":null,"score":{"opus":0.01079735305527623,"gpt":0.231381011640038,"spread":0.2205836585847618,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001584976,0.0001897174,0.0004597164,0.0001672486,0.00002907287,0.000002730264,0.00004097775,0.0001555269,0.00003887977],"category_scores_gemma":[0.00001718213,0.0001505494,0.00004845918,0.0001215169,0.00006518026,0.00003735308,0.00004096061,0.00009145257,0.000008792197],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008559308,"about_ca_system_score_gemma":0.00004890865,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001454326,"about_ca_topic_score_gemma":0.00005437403,"domain_scores_codex":[0.9989477,0.0001302095,0.0003555731,0.0002658039,0.00009812581,0.000202548],"domain_scores_gemma":[0.9995865,0.00008838839,0.0001554839,0.00009024151,0.00001813887,0.00006130357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003425613,0.0001086751,0.08573467,0.0001255082,0.00002669106,0.000002046379,0.000105513,5.003899e-7,0.8632414,0.000008943136,0.000004058761,0.05029948],"study_design_scores_gemma":[0.003965552,0.003619251,0.01452177,0.0002241012,0.00004149376,0.00002485528,0.00009973123,0.000004174003,0.977325,0.000002531672,0.00005555266,0.0001159563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977863,0.001141359,0.00001045649,0.00001668596,0.00009672197,0.000859645,0.00002926719,0.00001530782,0.00004425885],"genre_scores_gemma":[0.9979041,0.00005916844,0.001572469,0.00001354956,0.00002157638,0.00006819345,0.00007553306,0.00001664991,0.000268731],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1140837,"threshold_uncertainty_score":0.6139227,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2120760574","doi":"10.1186/1471-213x-11-50","title":"A novel amniote model of epimorphic regeneration: the leopard gecko, Eublepharis macularius","year":2011,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":174,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Blastema; Biology; Regeneration (biology); Anatomy; Context (archaeology); Wound healing; Epidermis (zoology); Cell biology; Pathology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.06214992908886261,"gpt":0.2472826494853494,"spread":0.1851327203964868,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003927741,0.0002404062,0.0002207664,0.00006255743,0.000172827,0.000007408054,0.0003975586,0.0003304318,0.00007610059],"category_scores_gemma":[0.0000482732,0.0001797976,0.0001094399,0.0001444177,0.0003488603,0.00001155902,0.0002942002,0.0001004674,0.00003333624],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002902812,"about_ca_system_score_gemma":0.0003044838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003373707,"about_ca_topic_score_gemma":0.0001614052,"domain_scores_codex":[0.9986032,0.00009183239,0.0004391033,0.0004573984,0.00009504505,0.000313403],"domain_scores_gemma":[0.9993615,0.00001433871,0.000183939,0.0002836376,0.00009250535,0.00006405407],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001868671,0.00008272546,0.03539964,0.00001080305,0.0001121756,4.746884e-7,0.0002045518,0.00008484944,0.9590163,0.002798786,0.000334767,0.001768118],"study_design_scores_gemma":[0.0008271615,0.0001699083,0.04393158,0.000009155026,0.0000271004,0.0001056861,0.0001102345,0.0005201045,0.9496487,0.001429279,0.002855252,0.000365834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.913726,0.000522805,0.08110248,0.0001035285,0.0003228847,0.0003667589,0.00005733393,0.0000224429,0.003775746],"genre_scores_gemma":[0.9277679,0.0000923515,0.07019775,0.0003956807,0.00007015,0.00004170466,0.0005391502,0.0000183972,0.0008769025],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01404189,"threshold_uncertainty_score":0.7331935,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2163804636","doi":"10.1186/1471-213x-10-89","title":"Pax2 and Pax8 cooperate in mouse inner ear morphogenesis and innervation","year":2010,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Hearing, Cochlea, Tinnitus, Genetics","field":"Neuroscience","cited_by":158,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"National Institute on Deafness and Other Communication Disorders; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Inner ear; PAX8; Morphogenesis; Cochlea; Spiral ganglion; Anatomy; Cell biology; Developmental biology; Gastrulation; Vestibular system; Neuroscience; Endocochlear potential; Otic vesicle; Embryogenesis; Embryo; Transcription factor; Gene expression; Genetics; Gene; In situ hybridization","retraction":null,"screen_n_in":null,"score":{"opus":0.03821177507458651,"gpt":0.2645841413729493,"spread":0.2263723662983628,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002651118,0.0001571315,0.0001643722,0.0001479314,0.0001080488,0.00004126657,0.0001356776,0.0001705067,0.00005215855],"category_scores_gemma":[0.0005588494,0.0001464563,0.000009331226,0.0002739953,0.0002429151,0.000120958,0.0002688707,0.0001898045,0.00005784294],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000264837,"about_ca_system_score_gemma":0.0001143022,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007681439,"about_ca_topic_score_gemma":0.0008410462,"domain_scores_codex":[0.9987709,0.0001103848,0.0002709094,0.0004638088,0.00007549801,0.0003084845],"domain_scores_gemma":[0.9995846,0.0001241362,0.00005475743,0.0001181333,0.00002717461,0.00009117966],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000161465,0.00001808899,0.2862158,0.000007136617,9.927437e-7,0.000003217833,0.0001949364,0.00000110011,0.7105915,0.0005318922,0.0000179329,0.002401272],"study_design_scores_gemma":[0.0005947943,0.00005045732,0.3276497,0.00000530814,0.000001764128,0.00007702738,0.00007653434,0.0001993929,0.6664141,0.0001489195,0.004534125,0.0002478377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990845,0.00002920409,0.00008545244,0.0001094293,0.000177944,0.0002041922,0.00001293072,0.00003846411,0.0002578947],"genre_scores_gemma":[0.9891036,0.0001132251,0.009410243,0.0009199735,0.0000275736,0.00002438363,0.00001104798,0.00001799764,0.0003720209],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04417736,"threshold_uncertainty_score":0.5972316,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1984015906","doi":"10.1186/1471-213x-7-114","title":"Genetic determinants of hyaloid and retinal vasculature in zebrafish","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":153,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of General Medical Sciences; Queen's University; Science Foundation Ireland; Queen's University Belfast; National Heart, Lung, and Blood Institute; Health Research Board","keywords":"Zebrafish; Biology; Retinal; Developmental biology; Computational biology; Cell biology; Evolutionary biology; Genetics; Gene; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.007927143166057768,"gpt":0.2455767122430329,"spread":0.2376495690769751,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003372275,0.0001608375,0.0001955971,0.0001038883,0.00003398215,0.000006075092,0.000148183,0.0002202517,0.00001901356],"category_scores_gemma":[0.0000855092,0.0001503504,0.00004228654,0.0001316937,0.0001720754,0.000005164559,0.00016312,0.00006909928,0.000004844078],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001529748,"about_ca_system_score_gemma":0.000102427,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002984569,"about_ca_topic_score_gemma":0.001098525,"domain_scores_codex":[0.9988696,0.00004035963,0.0003647878,0.0003394137,0.00007389947,0.0003119599],"domain_scores_gemma":[0.9996924,0.00002165073,0.00008512453,0.0001019736,0.00003357426,0.00006520882],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001608103,0.00002875809,0.8469321,0.00002616877,0.00001034482,0.000005308125,0.00006923492,4.019818e-7,0.146359,0.00004733536,0.00004362844,0.006317005],"study_design_scores_gemma":[0.0007409201,0.0001310003,0.9267733,0.0000188069,0.000003931891,0.0000692846,0.0001852538,0.000002945069,0.06901711,0.0002166627,0.002635044,0.0002057418],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967253,0.0007938972,0.0004784668,0.000007671464,0.00009501795,0.0001532919,0.000003807007,0.00000548344,0.001737099],"genre_scores_gemma":[0.9813818,0.0001373205,0.0181767,0.0001072697,0.00002960936,0.000007032664,0.00004665097,0.00001210877,0.0001015235],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07984126,"threshold_uncertainty_score":0.613111,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1484399489","doi":"10.1186/1471-213x-6-3","title":"m-Calpain is required for preimplantation embryonic development in mice","year":2006,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":150,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research; Queen's University; Heart and Stroke Foundation of Canada; National Science Foundation","keywords":"Calpain; Biology; Embryo; Embryonic stem cell; Molecular biology; Mutant; Cell biology; Proteases; Blastocyst; Embryogenesis; Genetics; Programmed cell death; Gene; Germline; Apoptosis; Enzyme; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01538190895671191,"gpt":0.2526241409364538,"spread":0.2372422319797419,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002888102,0.0001491177,0.0001260979,0.00009289146,0.00008951958,0.00001239342,0.000096207,0.0002106749,0.00002927792],"category_scores_gemma":[0.00003951661,0.000144432,0.00004970888,0.0001057528,0.00004637106,0.000007498981,0.00005419972,0.00003836488,0.00002888721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008965951,"about_ca_system_score_gemma":0.0002445549,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002187939,"about_ca_topic_score_gemma":0.0007345829,"domain_scores_codex":[0.9989194,0.00006150993,0.0003170336,0.0003785303,0.00006170236,0.000261794],"domain_scores_gemma":[0.9997325,0.00002417204,0.00008483136,0.00007774495,0.00004558284,0.00003518262],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003902343,0.00008837505,0.03795514,0.00004305803,0.00002335536,5.736773e-7,0.00007544257,0.00003016597,0.9515125,0.0008470213,0.00312217,0.005911921],"study_design_scores_gemma":[0.00246279,0.000144032,0.09049582,0.00002329011,0.000007278252,0.00003945019,0.000116424,0.0001615859,0.6599702,0.0009051431,0.2452314,0.0004425628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9535059,0.0002082118,0.04461915,0.000103913,0.0002366284,0.0006257326,0.00001996498,0.00002268649,0.0006578652],"genre_scores_gemma":[0.9591017,0.00001091761,0.03501113,0.000402887,0.0001445166,0.0002785556,0.002231505,0.00001888619,0.00279986],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2915424,"threshold_uncertainty_score":0.5889766,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2040502391","doi":"10.1186/1471-213x-11-57","title":"Loss of the Drosophila cell polarity regulator Scribbled promotes epithelial tissue overgrowth and cooperation with oncogenic Ras-Raf through impaired Hippo pathway signaling","year":2011,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":120,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics; National Health and Medical Research Council; Medical Research Council; University of Melbourne","keywords":"Biology; Regulator; Cell biology; Developmental biology; Hippo signaling pathway; Cell polarity; Drosophila (subgenus); Polarity (international relations); Signal transduction; Cell; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01899828313414828,"gpt":0.2163357038106004,"spread":0.1973374206764521,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002952403,0.0002635051,0.0002703083,0.00003074236,0.0001999025,0.0000144456,0.000252888,0.0002844664,0.00003553048],"category_scores_gemma":[0.0000519684,0.0001814158,0.00006484216,0.000136995,0.0003542253,0.00001604388,0.0001908547,0.0001185965,0.000005996487],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002800838,"about_ca_system_score_gemma":0.0004395402,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001274939,"about_ca_topic_score_gemma":0.000139326,"domain_scores_codex":[0.9985296,0.0002079773,0.0003532706,0.0004828044,0.00011126,0.0003151161],"domain_scores_gemma":[0.9993621,0.00002208946,0.000190215,0.0002432802,0.0001076846,0.00007466733],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003459892,0.000107131,0.03338548,0.00004045086,0.00005226656,0.000002500573,0.0006620142,0.000001567621,0.9648389,0.0003771545,0.000003185761,0.0001834138],"study_design_scores_gemma":[0.001106924,0.0007396892,0.005465298,0.00003458491,0.00002483068,0.00007151121,0.0001117141,0.000006911136,0.9912097,0.0004722326,0.0004758106,0.0002807718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975077,0.0003854296,0.001109251,0.00002445393,0.0001326466,0.0004113196,0.00009296489,0.00001979259,0.0003164298],"genre_scores_gemma":[0.9888659,0.00002323824,0.01055623,0.0001134451,0.00008874991,0.00002504363,0.000162704,0.00002794902,0.0001367945],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02792018,"threshold_uncertainty_score":0.7397923,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2032738039","doi":"10.1186/1471-213x-7-36","title":"Coordinate regulation of DNA methyltransferase expression during oogenesis","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Montreal Children's Hospital","funders":"Canadian Institutes of Health Research; National Institutes of Health; McGill University","keywords":"DNA methylation; Biology; DNMT3B; Methyltransferase; Methylation; DNA methyltransferase; Genomic imprinting; Oocyte; RNA-Directed DNA Methylation; Genetics; Epigenetics; Oogenesis; Cell biology; Molecular biology; DNA; Gene expression; Gene; Embryo","retraction":null,"screen_n_in":null,"score":{"opus":0.01395418148752143,"gpt":0.2618857638737291,"spread":0.2479315823862077,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004289898,0.0001346086,0.00014423,0.00009143554,0.00007498962,0.00000427739,0.0001192319,0.0001986074,0.00004054024],"category_scores_gemma":[0.00005922194,0.0001277103,0.00006391509,0.0001171696,0.00007284727,0.000005454687,0.00008094306,0.00003665968,0.000005939518],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002379163,"about_ca_system_score_gemma":0.00005421753,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000943204,"about_ca_topic_score_gemma":0.00005651715,"domain_scores_codex":[0.9989832,0.00006932183,0.0003484817,0.0002921954,0.00008186583,0.0002249223],"domain_scores_gemma":[0.9996009,0.00002629033,0.0000971625,0.0001426705,0.00006966446,0.00006327403],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001761758,0.00003043861,0.06860197,0.00001785386,0.00001873272,4.45806e-7,0.00004313486,0.00001383138,0.9286829,0.0000833031,0.000004973072,0.00232629],"study_design_scores_gemma":[0.0004373095,0.00007157026,0.1874678,0.00000847238,0.000006515239,0.000003192742,0.00005045072,0.000002117797,0.8107404,0.0001690856,0.0009124637,0.000130668],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9579875,0.0005803971,0.04033863,0.000006801331,0.000136525,0.0001412098,0.00001117092,0.00001048925,0.0007872285],"genre_scores_gemma":[0.9816778,0.0001056262,0.01771515,0.00001484139,0.00006877003,0.000007577766,0.0002256568,0.00001545896,0.000169066],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1188658,"threshold_uncertainty_score":0.5207873,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1980438710","doi":"10.1186/1471-213x-8-40","title":"The PI3K pathway regulates endochondral bone growth through control of hypertrophic chondrocyte differentiation","year":2008,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":108,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Canadian Arthritis Network; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Arthritis Society","keywords":"Chondrocyte; Endochondral ossification; Cell biology; PI3K/AKT/mTOR pathway; Biology; Chondrogenesis; Bone growth; Cartilage; Organ culture; Cellular differentiation; Internal medicine; Endocrinology; Signal transduction; Stem cell; Anatomy; In vitro; Medicine; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01849021014725732,"gpt":0.2227367139193606,"spread":0.2042465037721032,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006940746,0.0001956759,0.0003831239,0.00005542493,0.000239365,0.000005698207,0.00009248585,0.0001249669,0.00006118196],"category_scores_gemma":[0.00006975388,0.0001240716,0.0001162874,0.000122533,0.0002306027,0.00009757443,0.00004551949,0.00009482133,0.00005566447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007914436,"about_ca_system_score_gemma":0.0001724132,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001693924,"about_ca_topic_score_gemma":0.00003931298,"domain_scores_codex":[0.998813,0.00007636646,0.0003802183,0.0002567531,0.0001478211,0.000325851],"domain_scores_gemma":[0.9994412,0.0001248879,0.0001408832,0.0001472717,0.00008143542,0.00006432771],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001131846,0.0002321067,0.1033117,0.00003241938,0.0001314292,0.00005832767,0.0005452421,1.097891e-7,0.8760803,0.01200968,0.00009932254,0.006367491],"study_design_scores_gemma":[0.01531866,0.00247765,0.1070896,0.00008613239,0.0001055496,0.001866911,0.0002645967,0.00001357804,0.865151,0.003712805,0.003567365,0.0003461121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955739,0.001742648,0.0005700309,0.0001882666,0.0004151817,0.0005047298,0.00002309714,0.00005435954,0.0009278061],"genre_scores_gemma":[0.9936345,0.0004095956,0.004400688,0.0001624309,0.00008111129,0.00007171525,0.0001842999,0.00001809836,0.001037538],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01418682,"threshold_uncertainty_score":0.5059493,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2063850463","doi":"10.1186/1471-213x-7-125","title":"Differential regulation of abundance and deadenylation of maternal transcripts during bovine oocyte maturation in vitro and in vivo","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Institut National de la Recherche Agronomique","keywords":"Biology; Oocyte; In vitro maturation; Polyadenylation; Cell biology; Molecular biology; Embryo; Genetics; Blastocyst; Cyclin B; Gene expression; Embryogenesis; Gene; Cell cycle; Cyclin","retraction":null,"screen_n_in":null,"score":{"opus":0.01534768565828308,"gpt":0.2567684239217087,"spread":0.2414207382634256,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002009677,0.00006709202,0.0001882247,0.0001292141,0.00001393973,0.000001145189,0.000018073,0.0001032092,0.00001813492],"category_scores_gemma":[0.00003911987,0.00005807511,0.00001065362,0.00007653527,0.0001305337,0.00006794804,0.0000157461,0.00005721526,1.889413e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004413307,"about_ca_system_score_gemma":0.00002399153,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003962083,"about_ca_topic_score_gemma":0.0001918517,"domain_scores_codex":[0.9993125,0.00003862474,0.0003315428,0.0001813204,0.0000376879,0.00009827538],"domain_scores_gemma":[0.9998108,0.00002247012,0.00007757446,0.00004363906,0.0000271202,0.00001846223],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.01374444,0.00002116429,0.4390967,0.00006120474,0.000003899343,5.756974e-7,0.0001688905,8.494386e-8,0.5461348,0.00001326748,8.831074e-8,0.0007548045],"study_design_scores_gemma":[0.0006835134,0.00003210802,0.5317628,0.0000206925,0.000002360147,0.00001921013,0.00002547665,0.00001214352,0.4673609,0.00005462321,0.000001939678,0.00002422106],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989141,0.0001469842,0.0005990225,0.0000244706,0.00006218432,0.0001906803,0.000005038818,0.00000433329,0.00005318993],"genre_scores_gemma":[0.9977325,0.00001718773,0.002165611,0.000006354022,0.00001725922,0.000002836936,0.00002990796,0.000002783161,0.00002562701],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09266604,"threshold_uncertainty_score":0.2368234,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2008204897","doi":"10.1186/1471-213x-10-65","title":"An in vivo RNA interference screen identifies gene networks controlling Drosophila melanogasterblood cell homeostasis","year":2010,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics; Centre National de la Recherche Scientifique; Association pour la Recherche sur le Cancer","keywords":"Biology; Cell biology; RNA interference; Cellular differentiation; Stem cell; Haematopoiesis; Cell type; Developmental biology; Progenitor cell; Morphogenesis; Gene silencing; Hematopoietic stem cell; Hemangioblast; Homeostasis; Immunology; Gene; Genetics; Cell; RNA","retraction":null,"screen_n_in":null,"score":{"opus":0.01289642835343248,"gpt":0.2298452157845578,"spread":0.2169487874311253,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007306186,0.0003857258,0.000557859,0.0003432675,0.0002196168,0.00005011467,0.0007739955,0.0007157945,0.00123386],"category_scores_gemma":[0.00006424741,0.0003593889,0.00009052514,0.000241141,0.0003361632,0.000263161,0.0002986444,0.0007123742,0.0005178958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006777781,"about_ca_system_score_gemma":0.0001857048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001927539,"about_ca_topic_score_gemma":0.001663208,"domain_scores_codex":[0.9973135,0.0005348431,0.0006561512,0.0006551078,0.00003805106,0.0008023598],"domain_scores_gemma":[0.9991002,0.0002177987,0.0001945107,0.0003661404,0.0000659542,0.00005538875],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005202944,0.0001589033,0.008794353,0.000007109021,0.00006331228,0.00001455215,0.0003598857,0.000009176754,0.987694,0.0007434483,0.0000528334,0.001582147],"study_design_scores_gemma":[0.002786738,0.0002625151,0.003550029,0.00002364539,0.00002108488,0.0001725938,0.0004854498,0.0001533443,0.9910963,0.0004801267,0.000523827,0.0004443264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9900064,0.001002958,0.005662071,0.00003134035,0.002207664,0.0003916766,0.00006767269,0.0001052571,0.0005249461],"genre_scores_gemma":[0.9947292,0.00008485404,0.004097241,0.0002543754,0.0000514737,0.00006591056,0.0003169276,0.00003631432,0.0003637205],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005244324,"threshold_uncertainty_score":0.9998858,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2054859060","doi":"10.1186/1471-213x-7-104","title":"Loss of spermatogonia and wide-spread DNA methylation defects in newborn male mice deficient in DNMT3L","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Montreal Children's Hospital","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Biology; Developmental biology; DNA methylation; Methylation; Genetics; DNA; Andrology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01326266300171899,"gpt":0.2621852866959242,"spread":0.2489226236942052,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005928464,0.0001322176,0.0001693251,0.0001316704,0.00002184869,0.000005291642,0.0000904786,0.0002043,0.000007454903],"category_scores_gemma":[0.0001152414,0.0001334459,0.00002844526,0.0001532492,0.00008950435,0.000006036758,0.0001115113,0.00006271761,0.000003477846],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003349343,"about_ca_system_score_gemma":0.00007023455,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009782812,"about_ca_topic_score_gemma":0.002975637,"domain_scores_codex":[0.9989054,0.00007966401,0.0003923086,0.000304236,0.0000624774,0.0002559779],"domain_scores_gemma":[0.9996545,0.00006840625,0.0001004502,0.00009582486,0.0000328458,0.00004794273],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005855002,0.0000322866,0.472075,0.00001320647,0.000003684359,0.000001902415,0.00008229993,0.0000173673,0.525338,0.000112639,0.000001894793,0.00226317],"study_design_scores_gemma":[0.000500528,0.00006970655,0.4556647,0.00001064861,0.000002282585,0.000008204266,0.0000851798,0.00001296104,0.5414535,0.0001670807,0.00191317,0.0001120751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9902734,0.002032875,0.005994943,0.00001081898,0.00008614192,0.0001955033,0.000007979083,0.000003427734,0.001394871],"genre_scores_gemma":[0.9869925,0.000296444,0.01247014,0.00004493871,0.0000148219,0.000007111524,0.0001257123,0.00001001717,0.00003831506],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01641029,"threshold_uncertainty_score":0.5441766,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2111609646","doi":"10.1186/1471-213x-13-23","title":"FishFace: interactive atlas of zebrafish craniofacial development at cellular resolution","year":2013,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Dental and Craniofacial Research; Medical Research Council; National Institute of General Medical Sciences; National Institutes of Health; University of Oregon","keywords":"Zebrafish; Biology; Craniofacial; Anatomy; Developmental biology; Morphogenesis; Vertebrate; Cell biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.009613712127384284,"gpt":0.2260549727512607,"spread":0.2164412606238764,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000224681,0.0002944471,0.0002834325,0.0001060162,0.0001996079,0.00001193091,0.000282238,0.000408076,0.0006169182],"category_scores_gemma":[0.00007930456,0.0002778905,0.00009558969,0.0001457089,0.0002572045,0.0000242605,0.0005046311,0.00009628625,0.0004742876],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001630937,"about_ca_system_score_gemma":0.0002648373,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002979066,"about_ca_topic_score_gemma":0.0001432861,"domain_scores_codex":[0.998168,0.0001427826,0.0005725686,0.0005700193,0.0001255591,0.0004210987],"domain_scores_gemma":[0.9993127,0.00002985656,0.0002285535,0.0001849883,0.0001353467,0.0001085327],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001807485,0.00007922157,0.09254786,0.00002035264,0.0001066074,6.413339e-7,0.0001813374,0.000007395679,0.9008777,0.00007527305,0.002123787,0.003799093],"study_design_scores_gemma":[0.0006952261,0.0001361488,0.1949039,0.00001536446,0.000007159785,0.00002627413,0.0001743587,0.00001264557,0.7666298,0.0001384651,0.03691226,0.0003484679],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9925725,0.0001596461,0.00329256,0.00004843897,0.0004151815,0.0004805608,0.00001986297,0.00002525473,0.00298598],"genre_scores_gemma":[0.9683855,0.00002646523,0.02738908,0.0001861738,0.00008347783,0.0001207812,0.001676906,0.0000224017,0.002109238],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1342479,"threshold_uncertainty_score":0.9999673,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2001481979","doi":"10.1186/1471-213x-9-9","title":"In vitroculture and somatic cell nuclear transfer affect imprinting of SNRPN gene in pre- and post-implantation stages of development in cattle","year":2009,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"Institute of Human Development, Child and Youth Health; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Genomic imprinting; Biology; Somatic cell nuclear transfer; Imprinting (psychology); Reprogramming; DNA methylation; Epigenetics; Methylation; Genetics; Somatic cell; Embryo; Andrology; Molecular biology; Gene expression; Gene; Blastocyst; Embryogenesis","retraction":null,"screen_n_in":null,"score":{"opus":0.005892786256505913,"gpt":0.2255709578897011,"spread":0.2196781716331952,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001858411,0.000116113,0.0002018458,0.0001050225,0.00001470906,0.000004183379,0.00006775554,0.0001262465,0.000006034248],"category_scores_gemma":[0.00002236196,0.0001091268,0.00001537891,0.00008075091,0.00003698473,0.000007172021,0.00006053645,0.00005396337,4.901257e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001654572,"about_ca_system_score_gemma":0.00006304119,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006493025,"about_ca_topic_score_gemma":0.0002822046,"domain_scores_codex":[0.9991499,0.00005081506,0.0003511108,0.0002294529,0.00003980266,0.0001788888],"domain_scores_gemma":[0.9998387,0.00001293599,0.00005419012,0.00005295034,0.00001609174,0.00002511426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002221136,0.00004165759,0.2577223,0.00007340223,0.000003527723,5.072297e-7,0.001205447,0.000004264036,0.7383645,0.000009391469,4.256539e-7,0.002552361],"study_design_scores_gemma":[0.0005774674,0.0001090649,0.5855564,0.0000253076,0.000001445309,0.00002125517,0.0002775511,0.00000538291,0.4133169,0.00001227143,0.00002022706,0.00007667077],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993395,0.0002618643,0.00009766156,0.00001270477,0.0000195765,0.000205451,0.000005133156,0.000001772894,0.00005628778],"genre_scores_gemma":[0.987294,0.000111219,0.0124853,0.00004171815,0.000004256918,0.000005913331,0.00003876054,0.000006384412,0.00001240503],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3278341,"threshold_uncertainty_score":0.4450061,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1783917145","doi":"10.1186/1471-213x-7-5","title":"Fgf-dependent otic induction requires competence provided by Foxi1 and Dlx3b","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Hearing, Cochlea, Tinnitus, Genetics","field":"Neuroscience","cited_by":85,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institutes of Health; National Institute on Deafness and Other Communication Disorders; Canadian Institutes of Health Research; Alexander von Humboldt-Stiftung","keywords":"Otic vesicle; Biology; FGF8; Fibroblast growth factor; Cell biology; Ectopic expression; Zebrafish; Hindbrain; Genetics; In situ hybridization; Gene expression; Embryo; Receptor; Cell culture; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.05224690109018648,"gpt":0.2950730774492568,"spread":0.2428261763590703,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004367332,0.0002133131,0.0002039627,0.0001340022,0.0002163055,0.00004478439,0.0002813347,0.0001744732,0.00005168178],"category_scores_gemma":[0.0006471401,0.0002044894,0.00002377654,0.0002505415,0.0003216548,0.0001676209,0.0003309841,0.0002078901,0.0001501483],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000156903,"about_ca_system_score_gemma":0.0001518804,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004744007,"about_ca_topic_score_gemma":0.0001789853,"domain_scores_codex":[0.9979897,0.0001437041,0.0004249558,0.0006690405,0.0002017853,0.0005707985],"domain_scores_gemma":[0.9992557,0.0002471474,0.0001325429,0.0001687562,0.0000319145,0.0001638971],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004575143,0.0000499265,0.04375847,0.00001894312,0.000003456713,0.000009687217,0.0002643239,6.573475e-7,0.9432259,0.0009116585,0.0001608807,0.01155039],"study_design_scores_gemma":[0.0005910628,0.0001890345,0.08268454,0.00001940712,0.000005617329,0.0003272855,0.0002694498,0.00003114461,0.9066708,0.0008145293,0.008032876,0.0003642211],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940833,0.0001394277,0.002904434,0.0001066407,0.0005496743,0.0003783643,0.000009707584,0.0001131746,0.00171526],"genre_scores_gemma":[0.986955,0.00004512301,0.01156364,0.0007063414,0.00006054355,0.00001459513,0.00001272072,0.00002099173,0.0006209885],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03892606,"threshold_uncertainty_score":0.8338836,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1997299799","doi":"10.1186/1471-213x-7-18","title":"C-type natriuretic peptide regulates endochondral bone growth through p38 MAP kinase-dependent and – independent pathways","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Heart Failure Treatment and Management","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Canadian Arthritis Network; Canadian Institutes of Health Research; Arthritis Society","keywords":"Endochondral ossification; Biology; Cell biology; Signal transduction; Bone growth; Natriuretic peptide; Internal medicine; Microarray analysis techniques; Endocrinology; Gene expression; Gene; Anatomy; Cartilage; Biochemistry; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.02457676835885205,"gpt":0.2623696679551876,"spread":0.2377928995963356,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004532736,0.000351268,0.0004661622,0.000199968,0.0001486871,0.00002498211,0.0001072636,0.0002229635,0.0003015078],"category_scores_gemma":[0.00008106156,0.0002846142,0.00008156024,0.0002085762,0.0001787943,0.0001513387,0.0002636638,0.0002085524,0.0003591373],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002942188,"about_ca_system_score_gemma":0.0001636215,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001209849,"about_ca_topic_score_gemma":0.0003409458,"domain_scores_codex":[0.9978809,0.00006030768,0.0005020024,0.0005999155,0.0002746766,0.0006822399],"domain_scores_gemma":[0.9992762,0.0001154972,0.00009890137,0.0001990798,0.00008351562,0.0002267833],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002618597,0.001205515,0.6646646,0.0006535625,0.0008691179,0.002575913,0.003421096,6.29886e-7,0.249889,0.04919545,0.01382211,0.01108436],"study_design_scores_gemma":[0.01941822,0.003526129,0.5543292,0.0003781537,0.0005912409,0.003582211,0.005294857,0.00001406314,0.192244,0.01281423,0.2057521,0.002055572],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9889959,0.001334445,0.0007730434,0.0009685471,0.0007267115,0.001022698,0.000009182998,0.0002019136,0.005967637],"genre_scores_gemma":[0.9492153,0.0001875944,0.04633566,0.0007230703,0.0001428089,0.00002822455,0.0002055155,0.00003504508,0.003126764],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.19193,"threshold_uncertainty_score":0.9999606,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1995664509","doi":"10.1186/1471-213x-10-67","title":"Gene trap mutation of murine Outer dense fiber protein-2 gene can result in sperm tail abnormalities in mice with high percentage chimaerism","year":2010,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Biology; Sperm; Gene; Mutation; Genetics; Molecular biology; Trap (plumbing)","retraction":null,"screen_n_in":null,"score":{"opus":0.0122407642560556,"gpt":0.2293680679786004,"spread":0.2171273037225448,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001609745,0.0001743848,0.0002855777,0.0002162112,0.00002673097,0.000005529668,0.00006341112,0.000158289,0.0003129698],"category_scores_gemma":[0.00005478115,0.0001379854,0.00002933417,0.0001729668,0.0001393227,0.00007083235,0.00003449588,0.0002150955,0.00002090123],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001105399,"about_ca_system_score_gemma":0.0002118066,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00172497,"about_ca_topic_score_gemma":0.007952378,"domain_scores_codex":[0.9988834,0.00005509913,0.0003903612,0.0002940681,0.000117182,0.0002598915],"domain_scores_gemma":[0.9996428,0.00003289145,0.00009136612,0.0001162439,0.00005350702,0.0000632165],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007259431,0.0001681932,0.3472199,0.00007127725,0.0000258454,0.0001801474,0.00122759,0.000003308392,0.6490179,0.00005557096,0.000009956339,0.001294333],"study_design_scores_gemma":[0.003048915,0.0002331184,0.6722086,0.00005215812,0.00001315116,0.0006975324,0.0004166887,0.00001065894,0.3229737,0.00002168025,0.0001745828,0.0001492437],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986997,0.00003275733,0.00004654456,0.00015245,0.0001442634,0.0006008034,0.0000260451,0.00002330778,0.0002741234],"genre_scores_gemma":[0.9674115,0.000008048317,0.03120943,0.0001449111,0.00006952594,0.00007502875,0.0004976512,0.00001829723,0.0005656667],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3260442,"threshold_uncertainty_score":0.5626881,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2122706269","doi":"10.1186/1471-213x-8-117","title":"Loss of Notch signalling induced by Dll4 causes arterial calibre reduction by increasing endothelial cell response to angiogenic stimuli","year":2008,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children","funders":"National Cancer Institute; Fundação para a Ciência e a Tecnologia; Terry Fox Foundation","keywords":"Biology; Notch signaling pathway; Cell biology; Dorsal aorta; Endothelial stem cell; Receptor; Endoglin; Angiogenesis; Anatomy; Endocrinology; Cancer research; Stem cell; Signal transduction; In vitro; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02423760451046422,"gpt":0.263883845438707,"spread":0.2396462409282428,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002595597,0.000223807,0.0002467443,0.00006650334,0.0001325131,0.00000794265,0.000202224,0.000272978,0.00005725244],"category_scores_gemma":[0.00006614834,0.000220565,0.0001098358,0.000136017,0.000130916,0.000008564556,0.0001357345,0.00005281509,0.00001767901],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006637692,"about_ca_system_score_gemma":0.0003355746,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001679685,"about_ca_topic_score_gemma":0.00001845484,"domain_scores_codex":[0.9984865,0.0002382301,0.0003734469,0.0004653845,0.0001058636,0.0003306199],"domain_scores_gemma":[0.9994991,0.00004147127,0.0001304178,0.000146094,0.00006727798,0.0001156586],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003076436,0.00007893185,0.007855237,0.000008768945,0.00004788585,0.000001938443,0.0001375804,0.000006483586,0.9860197,0.000001410705,0.002540816,0.0002248335],"study_design_scores_gemma":[0.0008561457,0.0003742391,0.002403385,0.00001048055,0.00001254706,0.00009190376,0.0001088552,0.000001721017,0.9847447,0.000003538855,0.01111003,0.0002824062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99705,0.00055876,0.001386747,0.00003591177,0.0003309056,0.0002185999,0.0003526458,0.00001492993,0.00005150858],"genre_scores_gemma":[0.9951311,0.000117185,0.003570139,0.0001634542,0.0002325555,0.00003493074,0.0004937895,0.00003121499,0.0002256581],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008569218,"threshold_uncertainty_score":0.899438,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2073786035","doi":"10.1186/1471-213x-7-87","title":"Apoptosis in mouse fetal and neonatal oocytes during meiotic prophase one","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Directorate for Biological Sciences; York University","keywords":"Biology; Prophase; Meiosis; Oocyte; Andrology; TUNEL assay; Synaptonemal complex; Germ cell; DNA fragmentation; Apoptosis; Cell biology; Molecular biology; Genetics; Programmed cell death; Embryo; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.0275205647674706,"gpt":0.2772845493580123,"spread":0.2497639845905417,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004830997,0.0001521839,0.0002890922,0.0001556936,0.00007061271,0.000003921439,0.00006193742,0.000180214,0.00005898127],"category_scores_gemma":[0.0003008888,0.000113907,0.0000313291,0.0001463605,0.0003228196,0.00007853479,0.0001145345,0.0001822238,0.00003804831],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001378451,"about_ca_system_score_gemma":0.00008740039,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003307141,"about_ca_topic_score_gemma":0.0001159017,"domain_scores_codex":[0.9987475,0.00005233558,0.000322233,0.0004710754,0.00005914377,0.0003477316],"domain_scores_gemma":[0.9996365,0.0000474672,0.00004785112,0.0001261589,0.00003858908,0.0001034272],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002444271,0.0001371091,0.6622954,0.00005243292,0.00003077863,0.0000133555,0.0002171104,2.585127e-8,0.3310036,0.00004012681,0.000001917956,0.003763864],"study_design_scores_gemma":[0.001310586,0.0001135539,0.6176541,0.0000128241,0.000006911675,0.0001256506,0.0002307028,0.000001454402,0.3803125,0.0000530359,0.00007700401,0.0001016461],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984035,0.0003802225,0.0001669755,0.0001184395,0.0001031922,0.0003861514,0.000005981048,0.00004255174,0.000392992],"genre_scores_gemma":[0.9909369,0.00002337012,0.008294641,0.0001089543,0.00006283962,0.00001412396,0.00006078754,0.000008744741,0.0004896809],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04930885,"threshold_uncertainty_score":0.4644991,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1484481964","doi":"10.1186/1471-213x-6-47","title":"New insight into the role of phosphodiesterase 3A in porcine oocyte maturation","year":2006,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Oocyte; Germinal vesicle; Phosphodiesterase 3; Phosphodiesterase; Biology; Meiosis; In vitro maturation; Cell biology; Endocrinology; Internal medicine; Andrology; Genetics; Embryo; Biochemistry; Medicine; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.01130191793915278,"gpt":0.2506655282555218,"spread":0.239363610316369,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002292062,0.0001106793,0.0002248734,0.00006508386,0.0000400825,0.000002452908,0.00008103976,0.000123017,0.0001214567],"category_scores_gemma":[0.000107495,0.00006737966,0.00003442385,0.0001767619,0.0001496085,0.00005863929,0.00006042722,0.000113081,0.0000353713],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008401601,"about_ca_system_score_gemma":0.0001957686,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009201876,"about_ca_topic_score_gemma":0.0008130128,"domain_scores_codex":[0.9991284,0.00007758487,0.0003404608,0.0002580609,0.00004940702,0.0001460789],"domain_scores_gemma":[0.9996288,0.00005381915,0.00008112828,0.0001563586,0.00005192613,0.00002798536],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003615675,0.00007853418,0.7823172,0.00001242582,0.00001591428,0.000002633182,0.0008788551,4.192281e-7,0.200763,0.000933107,0.0001687829,0.01121351],"study_design_scores_gemma":[0.0006268962,0.00007849543,0.811814,0.00001145103,0.000006738866,0.00002655857,0.0001636083,0.000004710972,0.1724428,0.002672814,0.01209044,0.0000615306],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908087,0.002375885,0.0002050006,0.0004308365,0.0001552396,0.0003025988,0.000001913469,0.00001660538,0.005703221],"genre_scores_gemma":[0.9918799,0.00002160923,0.007027727,0.0002067684,0.00009229679,0.00001470096,0.0001465731,0.000004946486,0.000605509],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02949677,"threshold_uncertainty_score":0.2747663,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2146274451","doi":"10.1186/1471-213x-10-14","title":"Characterization of the astacin family of metalloproteases in C. elegans","year":2010,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Max-Planck-Gesellschaft; Michael Smith Health Research BC; Genome Canada","keywords":"Biology; Mutant; Phenotype; Genetics; Extracellular matrix; Genome; Extracellular; Cell biology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01028303325735242,"gpt":0.2207103624663397,"spread":0.2104273292089873,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001616428,0.0001037109,0.0001486965,0.00004345204,0.00002438812,0.000003095901,0.0002512201,0.0001459255,0.00002265228],"category_scores_gemma":[0.00006919177,0.00008067716,0.00005173013,0.00009618281,0.0001643457,0.000003760773,0.0001456982,0.00007960085,0.00000257791],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006135564,"about_ca_system_score_gemma":0.000154806,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005358894,"about_ca_topic_score_gemma":0.0007296365,"domain_scores_codex":[0.9992717,0.00006040768,0.0002742399,0.0001897521,0.00006142498,0.0001424775],"domain_scores_gemma":[0.9996138,0.000007261912,0.0001276908,0.000181144,0.00004669145,0.00002347016],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001734238,0.00004547985,0.1531418,0.00001313769,0.00001144368,8.653605e-8,0.0001219968,0.000001841168,0.8460917,0.0001869321,0.00000404292,0.0003641473],"study_design_scores_gemma":[0.0001929336,0.00004051644,0.305767,0.000004046633,0.000003974269,0.000004022541,0.00004984508,0.000004390779,0.6925479,0.00007205984,0.001243648,0.00006965119],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997628,0.00003617818,0.001608743,0.00002293358,0.0002605297,0.0001988541,0.00003259626,0.00000307405,0.0002091378],"genre_scores_gemma":[0.9951755,0.00002562185,0.004413798,0.00009908114,0.00003181278,0.00001224857,0.0001167765,0.000009689784,0.0001154638],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1535438,"threshold_uncertainty_score":0.3289919,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2089124271","doi":"10.1186/1471-213x-7-132","title":"The oxidative stress adaptor p66Shc is required for permanent embryo arrest in vitro","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Ontario Ministry of Food and Agriculture","keywords":"Microinjection; Biology; Blastocyst; Gene knockdown; Andrology; Embryo; Germinal vesicle; Cell biology; Oxidative stress; RNA interference; Messenger RNA; Zygote; Gene silencing; Molecular biology; Gene expression; Embryogenesis; Gene; Oocyte; RNA; Genetics; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.04097570785484921,"gpt":0.3159047183133671,"spread":0.2749290104585179,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001012791,0.0001731409,0.0002774551,0.00007047072,0.0001746141,0.000005829024,0.0001623434,0.0001932957,0.0000277068],"category_scores_gemma":[0.0005180734,0.0001111122,0.00007324795,0.0001367326,0.0003984293,0.00005446071,0.00008913556,0.0001608359,0.00004160641],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002104123,"about_ca_system_score_gemma":0.0001956921,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002643957,"about_ca_topic_score_gemma":0.0002356048,"domain_scores_codex":[0.9984704,0.00008552093,0.0004176438,0.0004927628,0.00007241066,0.000461305],"domain_scores_gemma":[0.9991067,0.0003810851,0.00009499356,0.0002259572,0.0001088928,0.00008238644],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.02536884,0.000322587,0.2658467,0.00005301398,0.0001415866,0.00001251902,0.001050823,4.894617e-8,0.6921384,0.0006428294,0.001206511,0.01321609],"study_design_scores_gemma":[0.001177794,0.0001718674,0.602587,0.00001535532,0.00001107573,0.00001508515,0.001169869,0.000005141053,0.3834304,0.0003836104,0.01089749,0.0001353092],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994715,0.0004912167,0.0006515729,0.0008112255,0.0006440098,0.000958813,0.00008862128,0.00002960807,0.001609872],"genre_scores_gemma":[0.9926926,0.00002484061,0.005034287,0.000651425,0.0001803934,0.0001020775,0.0003117241,0.00001116963,0.0009914533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3367402,"threshold_uncertainty_score":0.4531023,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2168228992","doi":"10.1186/1471-213x-7-90","title":"Alterations in transcript abundance of bovine oocytes recovered at growth and dominance phases of the first follicular wave","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Rheinische Friedrich-Wilhelms-Universität Bonn","keywords":"Biology; Follicular phase; Oocyte; Microarray; Microarray analysis techniques; Estrous cycle; DNA microarray; Transcriptome; Andrology; Gene; Gene expression; Gene chip analysis; Candidate gene; Gene expression profiling; Folliculogenesis; Molecular biology; Genetics; Cell biology; Endocrinology; Embryogenesis; Embryo","retraction":null,"screen_n_in":null,"score":{"opus":0.02599744413751925,"gpt":0.2636000729308942,"spread":0.2376026287933749,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003127016,0.00009439523,0.0002624335,0.00004993117,0.00005739082,7.891142e-7,0.00005945364,0.00009352704,0.00003159984],"category_scores_gemma":[0.0002991764,0.00006255106,0.00004662341,0.0001594352,0.0004409748,0.0000412731,0.00004455914,0.00006701285,8.339907e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005620211,"about_ca_system_score_gemma":0.00006758102,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006253099,"about_ca_topic_score_gemma":0.0008425233,"domain_scores_codex":[0.9991648,0.00004157456,0.0003591449,0.0002455824,0.00004297612,0.000145927],"domain_scores_gemma":[0.9995821,0.0001141382,0.00009862713,0.000128889,0.0000525545,0.00002367542],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003288674,0.000115936,0.6659771,0.00006212357,0.0000246828,0.000001950829,0.0004112455,7.726349e-8,0.329461,0.0002027696,0.00002477506,0.0004297039],"study_design_scores_gemma":[0.000824704,0.0001205137,0.6130714,0.00003633523,0.000007791724,0.00003774341,0.00004522055,0.000001694648,0.3851388,0.0001621096,0.0005124544,0.00004128367],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971563,0.001224874,0.0003102755,0.0002496321,0.0001232001,0.0003285346,0.00003000186,0.00000474419,0.0005724186],"genre_scores_gemma":[0.9969062,0.00008115274,0.002673994,0.0001434142,0.00001721081,0.00001077214,0.00003091294,0.000003605395,0.000132736],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05567773,"threshold_uncertainty_score":0.2550758,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2076095845","doi":"10.1186/1471-213x-10-15","title":"BMP-2 functions independently of SHH signaling and triggers cell condensation and apoptosis in regenerating axolotl limbs","year":2010,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Institut de Recherche Clinique De Montréal; Université de Montréal; Réseau de Recherche en Santé Buccodentaire et Osseuse","keywords":"Axolotl; Cyclopamine; Sonic hedgehog; Biology; Noggin; Hedgehog; Cell biology; Bone morphogenetic protein; Regeneration (biology); Blastema; Hedgehog signaling pathway; Limb development; Apical ectodermal ridge; Zone of polarizing activity; Limb bud; Anatomy; Signal transduction; Ectoderm; Genetics; Embryogenesis; Embryo","retraction":null,"screen_n_in":null,"score":{"opus":0.009461784877711855,"gpt":0.2263211436238453,"spread":0.2168593587461334,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003508886,0.0001540187,0.0001729753,0.0001161967,0.00009972262,0.00001015424,0.00007464799,0.0003380463,0.00002166008],"category_scores_gemma":[0.00006516679,0.0001500871,0.00002662516,0.0001024912,0.0001964721,0.00001216275,0.0001248946,0.0001242245,0.000003499427],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001391002,"about_ca_system_score_gemma":0.0001140135,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002311817,"about_ca_topic_score_gemma":0.0004896329,"domain_scores_codex":[0.9989713,0.00008084667,0.0003288718,0.0003739183,0.00005065655,0.0001943746],"domain_scores_gemma":[0.9996595,0.00004055052,0.0001225079,0.00008423445,0.00003865306,0.00005455444],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006149562,0.00003118848,0.2519086,0.00001394425,0.00001375953,1.373454e-7,0.00008147622,0.000005612609,0.7447824,0.0001649413,0.0000114876,0.002924919],"study_design_scores_gemma":[0.000888779,0.0001699596,0.09275236,0.000009597623,0.000008582384,0.00002993926,0.00041524,0.00002455816,0.904913,0.0001332615,0.0004469053,0.0002078258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983599,0.0003686047,0.0003808286,0.0000285744,0.000219113,0.0001873673,0.00001421744,0.000008470898,0.0004329776],"genre_scores_gemma":[0.9885945,0.00007157721,0.01071157,0.00007093019,0.00004137184,0.00002533206,0.0003044763,0.00001031904,0.0001699251],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1601305,"threshold_uncertainty_score":0.6120374,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2110806916","doi":"10.1186/1471-213x-7-92","title":"A systematic screen for genes expressed in definitive endoderm by Serial Analysis of Gene Expression (SAGE)","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency","funders":"Michael Smith Health Research BC; Terry Fox Foundation; Canada's Michael Smith Genome Sciences Centre; National Cancer Institute; Genome Canada","keywords":"Endoderm; Biology; Serial analysis of gene expression; Foregut; Somite; Genetics; Gene; Developmental biology; Embryonic stem cell; Gene expression; Cell biology; Gene expression profiling; Anatomy","retraction":null,"screen_n_in":null,"score":{"opus":0.02723310485457479,"gpt":0.2819080573676738,"spread":0.254674952513099,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000520507,0.0001428017,0.0007249648,0.0003875465,0.00003248836,0.00000380504,0.00006923962,0.0001382401,0.00009727851],"category_scores_gemma":[0.0003678435,0.0001114499,0.0001235433,0.0004040913,0.00006021159,0.00004121081,0.00003131592,0.00004004483,0.000005962765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008306174,"about_ca_system_score_gemma":0.000090826,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004421482,"about_ca_topic_score_gemma":0.00005804001,"domain_scores_codex":[0.9987003,0.0000786952,0.0006070705,0.0002569355,0.0001019234,0.000255083],"domain_scores_gemma":[0.9989303,0.0006439621,0.0001741362,0.0001136547,0.00005837056,0.00007959523],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006525894,0.0001107212,0.1445139,0.0007214205,0.0003977862,0.000002108031,0.0002505428,0.000001607774,0.8529953,0.00005337009,0.00004010156,0.0002605877],"study_design_scores_gemma":[0.003378663,0.0001742186,0.0375002,0.0005798236,0.0005102234,0.000006108122,0.001374578,0.0001213195,0.9560967,0.00003978926,0.00005940808,0.0001589293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9501257,0.0007692059,0.04743784,0.00000747529,0.00009696384,0.0007582307,0.0001603249,0.00002302197,0.000621231],"genre_scores_gemma":[0.9502609,0.00002676013,0.04833626,0.0001594392,0.00002921172,0.000141,0.0008607616,0.00001129522,0.0001743306],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1070137,"threshold_uncertainty_score":0.4544797,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2037382435","doi":"10.1186/1471-213x-8-92","title":"An ontology for Xenopus anatomy and development","year":2008,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Biomedical Text Mining and Ontologies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"National Institutes of Health; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Alberta Heritage Foundation for Medical Research","keywords":"Xenopus; Biology; Ontology; Model organism; Computational biology; Controlled vocabulary; Bioinformatics; Computer science; Gene; Information retrieval; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.04007027699062416,"gpt":0.3084072116659428,"spread":0.2683369346753186,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001866767,0.0001906598,0.000218271,0.0000607593,0.0002405796,0.000007149343,0.0002156648,0.0003207296,0.00001814379],"category_scores_gemma":[0.0001034866,0.0001658918,0.00003127592,0.00005127314,0.0004199441,0.000004783825,0.0001212919,0.00006041509,0.00001245414],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002378816,"about_ca_system_score_gemma":0.0003302122,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000095858,"about_ca_topic_score_gemma":0.0001691514,"domain_scores_codex":[0.9987478,0.00005828819,0.0002580273,0.0005047251,0.00005429431,0.000376925],"domain_scores_gemma":[0.9995751,0.00003806594,0.000060296,0.0001401485,0.00004539207,0.0001409822],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006080584,0.0003009339,0.45361,0.00006611207,0.0002006877,0.00001566627,0.0009900345,0.000001165041,0.3752569,0.001220065,0.00317803,0.1645523],"study_design_scores_gemma":[0.002278428,0.00112298,0.09605298,0.000008524255,0.000009229187,0.000690195,0.0005730651,0.00002023016,0.1271833,0.0003172219,0.7710863,0.0006575967],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.975309,0.000891358,0.02297868,0.0000687002,0.0002070259,0.000212692,0.00001547868,0.00004448957,0.0002726396],"genre_scores_gemma":[0.7596705,0.00008686643,0.2389399,0.0004875235,0.00009026013,0.0001004247,0.0003879493,0.00001528679,0.0002213214],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7679082,"threshold_uncertainty_score":0.6764871,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2207345824","doi":"10.1186/s12861-015-0096-3","title":"Transcriptome profiling of bovine inner cell mass and trophectoderm derived from in vivo generated blastocysts","year":2015,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Inner cell mass; Transcriptome; Cell biology; Gene expression profiling; Epigenetics; Genetics; Microarray analysis techniques; Molecular biology; Gene; Embryo; Blastocyst; Gene expression; Embryogenesis","retraction":null,"screen_n_in":null,"score":{"opus":0.03898090869264946,"gpt":0.2660329694596803,"spread":0.2270520607670308,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002722369,0.0001634711,0.000414225,0.0001035362,0.00002129652,0.000002422575,0.00007076922,0.0002095761,0.00007942574],"category_scores_gemma":[0.000144412,0.0001288873,0.00002948526,0.0001663341,0.0002477361,0.00005575668,0.0000426215,0.0001371536,0.000009887054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008951418,"about_ca_system_score_gemma":0.0003194461,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001009618,"about_ca_topic_score_gemma":0.00007265562,"domain_scores_codex":[0.9987317,0.0001486871,0.0003867814,0.0004471967,0.00006193637,0.0002236726],"domain_scores_gemma":[0.9995413,0.00003939511,0.00007483356,0.0001316853,0.0001076219,0.0001051665],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002681276,0.00007363147,0.3781479,0.00001852462,0.00002124824,0.00000568779,0.0003141966,4.304652e-7,0.6186066,0.00001008429,0.00001945234,0.0001010027],"study_design_scores_gemma":[0.002497122,0.0002833073,0.3234783,0.00001358179,0.00001393568,0.00001640599,0.0002896757,0.00003189329,0.6729155,0.0001570654,0.0001917109,0.0001115041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970067,0.000854569,0.0006790266,0.00007762745,0.000190163,0.0003926922,0.00003999962,0.00002435167,0.0007349376],"genre_scores_gemma":[0.9711074,0.00001719992,0.02838712,0.0001414493,0.00004679301,0.00002709798,0.0001513534,0.00001014274,0.0001115103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05466965,"threshold_uncertainty_score":0.525587,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2137310567","doi":"10.1186/1471-213x-6-41","title":"Role of chromosome stability and telomere length in the production of viable cell lines for somatic cell nuclear transfer","year":2006,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Somatic cell nuclear transfer; Biology; Telomere; Blastocyst; Andrology; Somatic cell; Chromosome; Population; Genetics; Embryonic stem cell; Aneuploidy; Cell biology; Embryo; Embryogenesis; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01741673760943441,"gpt":0.2337043220903242,"spread":0.2162875844808898,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005304643,0.0001027265,0.0002853676,0.00004964052,0.00003924608,0.000001304013,0.00006859744,0.0001130859,0.00004274228],"category_scores_gemma":[0.000107098,0.00006663065,0.00004128386,0.0001154746,0.0002848336,0.00004762741,0.00001926474,0.00007478341,0.000002521577],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002743892,"about_ca_system_score_gemma":0.00007546055,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005580626,"about_ca_topic_score_gemma":0.00005685569,"domain_scores_codex":[0.9990412,0.0001036397,0.0003690375,0.000292726,0.0000465969,0.0001468298],"domain_scores_gemma":[0.9995971,0.0001036302,0.00005608182,0.0001530913,0.0000753839,0.00001471284],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007423538,0.0004191462,0.2754509,0.000380504,0.000007290099,9.646111e-8,0.000666277,2.437666e-7,0.7219192,0.0001007288,0.00001459294,0.0002986391],"study_design_scores_gemma":[0.0005043445,0.0002364657,0.4779596,0.00001251687,0.00001572782,0.000009474229,0.0009685296,0.000007147067,0.5190772,0.0007669266,0.0003887618,0.00005329432],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977584,0.00041361,0.00001981358,0.00009251149,0.00006464827,0.0008606935,0.00001816952,0.000008886169,0.0007632401],"genre_scores_gemma":[0.9970402,0.00001658824,0.002742441,0.00002301699,0.0000427689,0.00003795358,0.00004475677,0.000006183604,0.00004608249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.202842,"threshold_uncertainty_score":0.2717119,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1758816958","doi":"10.1186/1471-213x-7-2","title":"Mouse preimplantation embryo responses to culture medium osmolarity include increased expression of CCM2 and p38 MAPK activation","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Vascular Malformations Diagnosis and Treatment","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Children’s Health Research Institute; Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research; University of North Carolina at Chapel Hill","keywords":"Embryo; Biology; p38 mitogen-activated protein kinases; MAPK/ERK pathway; Cell biology; Osmotic concentration; Protein kinase A; Kinase; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.02497664227775907,"gpt":0.3064912135496137,"spread":0.2815145712718546,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003776735,0.0001269556,0.0002099237,0.0001909789,0.00009258495,0.000007159183,0.0000481517,0.0001416695,0.00003246993],"category_scores_gemma":[0.000242049,0.00009572504,0.00003509036,0.0001517193,0.00004074123,0.000133138,0.00008477196,0.00007092453,0.00001327403],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001293842,"about_ca_system_score_gemma":0.000108279,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001073999,"about_ca_topic_score_gemma":0.000096251,"domain_scores_codex":[0.9991286,0.00007220083,0.0003072107,0.0001957301,0.0001347668,0.0001614835],"domain_scores_gemma":[0.9994701,0.0001296702,0.00009778704,0.0001038005,0.00008229311,0.0001163315],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009764077,0.0002414938,0.3634469,0.0000672633,0.00004378146,0.00000336283,0.00131003,3.813506e-7,0.6314436,0.0001198486,0.000243367,0.002103602],"study_design_scores_gemma":[0.0009787957,0.0001645358,0.5065842,0.00005347346,0.0000179556,0.00004446472,0.0004073842,0.000001421942,0.4910176,0.00003235372,0.0006346255,0.00006326163],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995652,0.00007013958,0.003277867,0.0001057861,0.00004173316,0.0005298543,0.00002924044,0.00003127535,0.0002621468],"genre_scores_gemma":[0.96429,0.00004019754,0.03467222,0.0003051391,0.00002302035,0.00003992365,0.0005480271,0.000007806015,0.00007364906],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1431373,"threshold_uncertainty_score":0.3903554,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2113156475","doi":"10.1186/1471-213x-12-14","title":"Histamine is a modulator of metamorphic competence in Strongylocentrotus purpuratus(Echinodermata: Echinoidea)","year":2012,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":53,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Metamorphosis; Strongylocentrotus purpuratus; Sea urchin; Marine invertebrates; Larva; Developmental biology; Ecology; Cell biology; Zoology","retraction":null,"screen_n_in":null,"score":{"opus":0.05996411032537238,"gpt":0.3003362972112408,"spread":0.2403721868858684,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000346792,0.0002619661,0.0004924498,0.0002776258,0.0001124476,0.000007146641,0.0005981431,0.000207607,0.0003622653],"category_scores_gemma":[0.0003321379,0.0002220884,0.00008214338,0.0004712128,0.0006681056,0.0003906083,0.0004127398,0.0004059104,0.0002052199],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009693398,"about_ca_system_score_gemma":0.0001750048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003758812,"about_ca_topic_score_gemma":0.00001981183,"domain_scores_codex":[0.9973338,0.0005687265,0.0005322985,0.0005315387,0.0001373642,0.0008963063],"domain_scores_gemma":[0.9990279,0.0003676563,0.0001665541,0.0002701438,0.00002944518,0.0001383198],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009733959,0.0001789286,0.2891977,0.00002215615,0.00000731509,0.000003716545,0.0001661472,0.000001377321,0.7035042,0.006568429,0.0001021791,0.0001505802],"study_design_scores_gemma":[0.000739458,0.0001164093,0.2741087,0.00001191945,0.000004844902,0.0001220626,0.00005456404,0.00007695524,0.7228792,0.0008671836,0.0007844108,0.0002342877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976143,0.0003244396,0.0001064051,0.00008330153,0.0004035646,0.0003776927,0.0000814313,0.00004084266,0.0009679978],"genre_scores_gemma":[0.9972928,0.00005148566,0.001612472,0.0007303088,0.00004094865,0.00004330661,0.00002647658,0.00001690548,0.0001852905],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01937502,"threshold_uncertainty_score":0.9056504,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1982947936","doi":"10.1186/1471-213x-7-15","title":"Developmental expression of the receptor for advanced glycation end-products (RAGE) and its response to hyperoxia in the neonatal rat lung","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Advanced Glycation End Products research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; Children's Hospital Research Institute of Manitoba; Research Manitoba","funders":"National Institute of Environmental Health Sciences; National Heart, Lung, and Blood Institute; National Institutes of Health; American Heart Association","keywords":"Hyperoxia; Rage (emotion); Glycation; Lung; Biology; Receptor; Western blot; Internal medicine; Endocrinology; Immunohistochemistry; Fetus; Andrology; Medicine; Immunology; Biochemistry; Pregnancy; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01978117102353626,"gpt":0.3102036144645577,"spread":0.2904224434410214,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001290343,0.0001488968,0.0001238737,0.00008304792,0.0001429275,0.000007584467,0.0003626593,0.0001118761,0.00001238318],"category_scores_gemma":[0.001455229,0.0001007894,0.00002608538,0.0003038261,0.00009905456,0.00001671558,0.0002769782,0.00009312662,0.000004741952],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008034729,"about_ca_system_score_gemma":0.0002837967,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002159047,"about_ca_topic_score_gemma":0.00005140339,"domain_scores_codex":[0.9985799,0.000209187,0.0003147651,0.0004486481,0.0001380638,0.0003094833],"domain_scores_gemma":[0.9993904,0.0001717923,0.00009055147,0.000171601,0.0001270404,0.00004863584],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002168206,0.00002730772,0.003641214,0.00002635284,0.000005408524,2.619747e-7,0.0005994533,0.000007998197,0.9847574,0.00009219373,0.0002102556,0.008463936],"study_design_scores_gemma":[0.0007208165,0.0001136865,0.02012092,0.00001842611,0.000001678519,0.00002554751,0.0007941104,0.00000145818,0.9334514,0.00003932713,0.04457503,0.0001376107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932277,0.0006211721,0.004183182,0.0005618006,0.0001915958,0.001117862,0.00003000917,0.000005616876,0.00006110545],"genre_scores_gemma":[0.9637331,0.00004916572,0.03511833,0.0002668612,0.00006293482,0.0001288809,0.0001474245,0.00001505385,0.0004783015],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05130602,"threshold_uncertainty_score":0.4110072,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2017713458","doi":"10.1186/1471-213x-10-72","title":"Embryonic vascular endothelial cells are malleable to reprogramming via Prox1 to a lymphatic gene signature","year":2010,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Lymphatic System and Diseases","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada; Susan G. Komen for the Cure","keywords":"Biology; Lymphangiogenesis; Reprogramming; Lymphatic Endothelium; Lymphatic system; Embryonic stem cell; Cell biology; Vascular endothelial growth factor C; Endothelial stem cell; Pathology; Immunology; Vascular endothelial growth factor A; Cancer research; Genetics; Gene; Vascular endothelial growth factor; In vitro; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01314057527916933,"gpt":0.2541393477180859,"spread":0.2409987724389166,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003109842,0.000293175,0.0004953636,0.0001917135,0.0001210642,0.00003172744,0.0002411908,0.0002414552,0.0002673306],"category_scores_gemma":[0.0003537864,0.0002332598,0.0001449069,0.0003373391,0.00005575854,0.00006264741,0.000190468,0.0000495537,0.001481848],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001800452,"about_ca_system_score_gemma":0.0005685763,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000493761,"about_ca_topic_score_gemma":0.0001349195,"domain_scores_codex":[0.9980369,0.00006924822,0.0003902726,0.0006789377,0.000233372,0.0005912585],"domain_scores_gemma":[0.9987482,0.00009975507,0.00009769745,0.0004036658,0.0001022227,0.0005484343],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002652453,0.0002400054,0.09780605,0.0001999879,0.000126229,0.00007004198,0.0004018442,0.000002699079,0.8940859,0.00007154961,0.0007946819,0.005935777],"study_design_scores_gemma":[0.008926781,0.0009990484,0.1203077,0.000476051,0.0003112955,0.00117905,0.00187173,0.00006606249,0.7248661,0.0002596923,0.1392126,0.001523934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932634,0.000239116,0.002454804,0.0002378305,0.00101439,0.001871138,0.00003115283,0.0001540838,0.0007341356],"genre_scores_gemma":[0.9186922,0.000004977118,0.07670305,0.00210816,0.0003570807,0.0004168368,0.0000779593,0.00004381368,0.001595966],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1692198,"threshold_uncertainty_score":0.9992956,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994919373","doi":"10.1186/1471-213x-10-18","title":"Micro-computed tomography-based phenotypic approaches in embryology: procedural artifacts on assessments of embryonic craniofacial growth and development","year":2010,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Anatomy and Medical Technology","field":"Engineering","cited_by":49,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Alberta Children's Hospital; University of Calgary","funders":"Canadian Institutes of Health Research; Genome Alberta; Genome Canada","keywords":"Craniofacial; Biology; Fixation (population genetics); Morphometrics; Computed tomography; Anatomy; 3d scanning; Shape analysis (program analysis); Artificial intelligence; Computer science; Radiology; Genetics; Zoology","retraction":null,"screen_n_in":null,"score":{"opus":0.02328840446798732,"gpt":0.2390181841779696,"spread":0.2157297797099823,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001766724,0.0002509686,0.0003559904,0.0003781438,0.00005305473,0.00000638163,0.0002277648,0.0004169397,0.00002873863],"category_scores_gemma":[0.00005217499,0.0002314159,0.00003312534,0.0003016455,0.0003074126,0.00005841962,0.00007680582,0.0004400525,0.00001440218],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004745174,"about_ca_system_score_gemma":0.0002175985,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004615161,"about_ca_topic_score_gemma":0.0001158155,"domain_scores_codex":[0.9987239,0.00003534876,0.0003819789,0.0003391709,0.00009084505,0.000428744],"domain_scores_gemma":[0.9996455,0.00008161081,0.00005939983,0.00009956679,0.00001699797,0.00009696469],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002859051,0.0005830183,0.624553,0.0007102757,0.0002186043,0.00001996077,0.0006353885,0.00004489096,0.2527548,0.01101245,0.00006691648,0.1091147],"study_design_scores_gemma":[0.003691484,0.0002487094,0.5693706,0.00008807654,0.00001397614,0.00004543054,0.0003039162,0.001262621,0.4197673,0.00149625,0.002882417,0.0008292409],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957489,0.00008662562,0.002570147,0.00005726119,0.0003416321,0.0002877364,0.00000536666,0.0001669284,0.000735378],"genre_scores_gemma":[0.9451584,0.000009305663,0.05454456,0.0001262106,0.0000166187,0.00006365803,0.00005851962,0.00001836736,0.000004376329],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1670125,"threshold_uncertainty_score":0.9436868,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2064594731","doi":"10.1186/1471-213x-8-56","title":"Divergent roles for Eph and Ephrin in Avian Cranial Neural Crest","year":2008,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":47,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Erythropoietin-producing hepatocellular (Eph) receptor; Ephrin; Neural crest; Biology; Cranial neural crest; Neural fold; EPH receptor A2; Cell biology; Anatomy; Ectoderm; Rhombomere; Receptor; Neuroscience; Neural plate; Embryo; Genetics; Embryogenesis; Receptor tyrosine kinase; Transcription factor","retraction":null,"screen_n_in":null,"score":{"opus":0.09066411652539426,"gpt":0.2864990383407466,"spread":0.1958349218153523,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009203101,0.0001345154,0.0001607665,0.00007830768,0.0001964279,0.00001034713,0.0001922805,0.00006690865,0.00003923522],"category_scores_gemma":[0.0001550527,0.0001206692,0.00003310073,0.0001125384,0.0001762685,0.00011306,0.0001221565,0.00008287249,0.00002733854],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003365423,"about_ca_system_score_gemma":0.00005722653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001639709,"about_ca_topic_score_gemma":0.0001257856,"domain_scores_codex":[0.9988928,0.00007313731,0.0002326685,0.0003951756,0.00008523149,0.0003209626],"domain_scores_gemma":[0.9996103,0.0002116977,0.00004733579,0.00005290756,0.00000807767,0.00006969915],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002446235,0.00004786754,0.4691602,0.00000808156,0.000001423169,0.00004121985,0.0002044709,0.000004929504,0.5286698,0.0005591562,0.00004591588,0.001012277],"study_design_scores_gemma":[0.00235006,0.0004146783,0.676733,0.00001969518,0.000003935781,0.0005551541,0.0000832907,0.0003105123,0.3126808,0.0009972272,0.005380243,0.0004713838],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989458,0.00007551409,0.0002108373,0.00008928385,0.0002017857,0.0002534042,0.00001848513,0.00002837327,0.0001764709],"genre_scores_gemma":[0.9975032,0.00008220614,0.001199248,0.001003255,0.00005404904,0.00004884981,0.000005956053,0.00001038184,0.0000928604],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.215989,"threshold_uncertainty_score":0.4920746,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2139650361","doi":"10.1186/1471-213x-6-61","title":"Implantation Serine Proteinases heterodimerize and are critical in hatching and implantation","year":2006,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; University of California, San Francisco; Fondation pour la Recherche Médicale; University of Missouri","keywords":"Embryo; Biology; Serine; Enzyme; Hatching; Cell biology; Trypsin; Uterus; Molecular biology; Biochemistry; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01121328361498978,"gpt":0.2383215184361905,"spread":0.2271082348212007,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001042608,0.0001233291,0.0001817372,0.00009261641,0.0001086235,0.00001371392,0.00003907319,0.0001301487,0.0001005359],"category_scores_gemma":[0.00002860188,0.0001111953,0.00001091169,0.0000505612,0.0001765709,0.00009809778,0.00006150108,0.00009285151,0.00002556243],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002326223,"about_ca_system_score_gemma":0.00002247541,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005723286,"about_ca_topic_score_gemma":0.002325195,"domain_scores_codex":[0.9991929,0.00009113481,0.000228033,0.0002538848,0.00001239973,0.0002216549],"domain_scores_gemma":[0.999766,0.0001164632,0.00005215282,0.00003804514,0.0000136918,0.00001363109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001664279,0.00005224638,0.3790365,0.00007508553,0.000009045655,0.0000107792,0.0001715687,3.550363e-7,0.6135009,0.002668485,0.00004192956,0.004266713],"study_design_scores_gemma":[0.001481389,0.0001170839,0.9513936,0.00004176184,0.000008400046,0.000875745,0.0004300692,0.000003099712,0.04081298,0.0009955992,0.00360681,0.0002334901],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977371,0.001082506,0.0002895656,0.00008042972,0.0001441024,0.0001779207,0.000043918,0.00002435627,0.0004200917],"genre_scores_gemma":[0.9968473,0.00005551586,0.002373218,0.00007043628,0.00001480764,0.00003198918,0.0003935381,0.000006676487,0.000206571],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5726879,"threshold_uncertainty_score":0.4534414,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2109640637","doi":"10.1186/1471-213x-14-22","title":"A detailed staging scheme for late larval development in Strongylocentrotus purpuratus focused on readily-visible juvenile structures within the rudiment","year":2014,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Johns Hopkins University; University of Washington; University of Guelph; National Science Foundation","keywords":"Strongylocentrotus purpuratus; Biology; Body plan; Metamorphosis; Sea urchin; Juvenile; Larva; Developmental biology; Echinoderm; Ecology; Evolutionary biology; Zoology; Anatomy; Fishery; Embryo; Cell biology","retraction":null,"screen_n_in":null,"score":{"opus":0.01427611225721061,"gpt":0.2488444378640925,"spread":0.2345683256068819,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008498632,0.0003966992,0.0003439883,0.0001321051,0.0003287618,0.00003675913,0.0004056258,0.0003326487,0.00002808842],"category_scores_gemma":[0.0001640908,0.0002968975,0.00009169778,0.0001721439,0.000167477,0.0000140528,0.0002379834,0.0001761931,0.00003671551],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001710948,"about_ca_system_score_gemma":0.0004182827,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008372927,"about_ca_topic_score_gemma":0.0006217092,"domain_scores_codex":[0.9975655,0.0002279599,0.0006496778,0.000753313,0.0001508174,0.000652712],"domain_scores_gemma":[0.9992326,0.00008575623,0.0002340225,0.0002808535,0.00006412746,0.0001025922],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002070808,0.0002387424,0.3879583,0.00007841893,0.0003452602,0.000002698746,0.0006645275,0.0005678295,0.5738289,0.008548208,0.0008390491,0.02485718],"study_design_scores_gemma":[0.004986206,0.0006323581,0.240018,0.00005635243,0.0000199057,0.00002178635,0.0002878632,0.0004025029,0.6985434,0.002228684,0.05186009,0.0009427955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943114,0.0001885469,0.003337701,0.0001537689,0.0004897598,0.0009826174,0.00002114697,0.00003201032,0.0004830335],"genre_scores_gemma":[0.9481303,0.00001189563,0.04932907,0.0005527908,0.0001169772,0.0003590338,0.0009452555,0.00003488019,0.000519783],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1479403,"threshold_uncertainty_score":0.9999483,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2020359241","doi":"10.1186/1471-213x-7-17","title":"Expression of S100B during embryonic development of the mouse cerebellum","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Hearing, Cochlea, Tinnitus, Genetics","field":"Neuroscience","cited_by":44,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"University of Toronto","keywords":"Cerebellum; Biology; Embryonic stem cell; Neurogenesis; Progenitor cell; Cell biology; Granule cell; Granule (geology); Population; PAX6; Gliogenesis; Neuroscience; Progenitor; Central nervous system; Stem cell; Gene; Genetics; Transcription factor","retraction":null,"screen_n_in":null,"score":{"opus":0.04166283764840811,"gpt":0.276953957421498,"spread":0.2352911197730899,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004891815,0.0002002247,0.0002545461,0.0001425486,0.0002107308,0.0000066697,0.0006595044,0.0001594374,0.00008773177],"category_scores_gemma":[0.0004207584,0.0001525588,0.00006621907,0.0003824283,0.0003075064,0.00006239359,0.0008315167,0.0001707742,0.00005074481],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001546714,"about_ca_system_score_gemma":0.0004407191,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007287653,"about_ca_topic_score_gemma":0.0001097308,"domain_scores_codex":[0.9979551,0.0001314443,0.000701845,0.0004264085,0.0002755195,0.0005096282],"domain_scores_gemma":[0.9990696,0.0001712141,0.0003142953,0.0003091499,0.0000470666,0.00008867867],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005138569,0.00006748032,0.06938952,0.0000543641,0.000003458113,0.000001135166,0.0009813263,0.00000540758,0.9284934,0.0001473135,0.0000140324,0.0007911649],"study_design_scores_gemma":[0.0003792859,0.00002055034,0.1492664,0.00003776557,0.000002109745,0.00002033816,0.0002403189,0.000002680814,0.8482867,0.00003415488,0.001555171,0.0001544762],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965925,0.00003561116,0.001136121,0.00001330484,0.0002840419,0.0002939858,0.000006188885,0.00003789502,0.00160032],"genre_scores_gemma":[0.9738944,0.000010891,0.02500252,0.00007789036,0.00002248298,0.000007896918,0.000003230753,0.00002247396,0.0009581802],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08020665,"threshold_uncertainty_score":0.6221169,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2123617287","doi":"10.1186/1471-213x-14-5","title":"Metabolomic insights into system-wide coordination of vertebrate metamorphosis","year":2014,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Genome British Columbia; University of Victoria","funders":"","keywords":"Metamorphosis; Biology; Metabolomics; Metabolite; Metabolic pathway; Biochemistry; Metabolism; Bioinformatics; Ecology; Larva","retraction":null,"screen_n_in":null,"score":{"opus":0.00746099099506831,"gpt":0.2041275632823152,"spread":0.1966665722872468,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002816855,0.0002472186,0.0004723273,0.0002125201,0.0001587123,0.00000911181,0.0003451697,0.0002493764,0.000259256],"category_scores_gemma":[0.00009921498,0.0001963946,0.000123124,0.0002294989,0.0002410704,0.0001335287,0.000218619,0.0001052895,0.001183096],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009096479,"about_ca_system_score_gemma":0.00006164688,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008259209,"about_ca_topic_score_gemma":0.000102287,"domain_scores_codex":[0.9984696,0.0003511579,0.0004670371,0.0003949467,0.00002806155,0.0002892156],"domain_scores_gemma":[0.9993582,0.0001191585,0.0002279934,0.0001862974,0.00008034987,0.00002794159],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001220912,0.00008432054,0.01646652,0.0001127849,0.0004263146,6.214867e-7,0.0004031312,9.632574e-7,0.9292913,0.04671497,0.004406318,0.001970631],"study_design_scores_gemma":[0.003141656,0.000174268,0.0237902,0.00006888285,0.0003195438,0.00002035124,0.001583176,0.00002644172,0.7331561,0.0008402313,0.2362653,0.000613909],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9820101,0.002871809,0.007460635,0.00007546856,0.001164906,0.0004422623,0.00001846722,0.0001437521,0.005812607],"genre_scores_gemma":[0.9954671,0.0000235646,0.00217309,0.0001958126,0.00001673532,0.00004060769,0.0007815351,0.00001571192,0.001285836],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2318589,"threshold_uncertainty_score":0.9995946,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2083469944","doi":"10.1186/1471-213x-12-8","title":"Integrins are required for cardioblast polarisation in Drosophila","year":2012,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Life Prediction Technologies (Canada); Forming Technologies (Canada); McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Developmental biology; Drosophila (subgenus); Integrin; Evolutionary biology; Computational biology; Cell biology; Genetics; Gene; Cell","retraction":null,"screen_n_in":null,"score":{"opus":0.02472844898300418,"gpt":0.2733600948341802,"spread":0.248631645851176,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004280414,0.0001913262,0.0001993203,0.00009931564,0.00009100026,0.000007508179,0.0001467016,0.0003599624,0.00001405721],"category_scores_gemma":[0.0001218285,0.0001825585,0.00007767354,0.0001204343,0.0001007496,0.00001893541,0.0001274313,0.00006897593,0.00003986096],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009780526,"about_ca_system_score_gemma":0.0001074885,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009409701,"about_ca_topic_score_gemma":0.0003052693,"domain_scores_codex":[0.9987721,0.00009288617,0.0003081349,0.0003371892,0.00005056141,0.0004391436],"domain_scores_gemma":[0.9996275,0.00002597941,0.0001058224,0.0001233957,0.00003837689,0.0000789165],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001576308,0.00005416844,0.6862968,0.00001203338,0.00003004285,1.621824e-7,0.0001057104,0.000002641043,0.3102818,0.0004840958,0.0001894811,0.00238549],"study_design_scores_gemma":[0.001008414,0.0001140135,0.840881,0.00001470268,0.000007150609,0.00003848852,0.0003985697,0.000005939612,0.1301089,0.0004188634,0.02666708,0.0003368595],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930614,0.0005873651,0.004072642,0.00006775223,0.0005966912,0.0004259387,0.00006174339,0.00001854749,0.001107926],"genre_scores_gemma":[0.9855111,0.0000347985,0.01187626,0.0002492025,0.0002642139,0.0001391155,0.001607707,0.00001782135,0.0002997968],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1801729,"threshold_uncertainty_score":0.7444521,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2128482306","doi":"10.1186/1471-213x-8-112","title":"Neurotransmitter alterations in embryonic succinate semialdehyde dehydrogenase (SSADH) deficiency suggest a heightened excitatory state during development","year":2008,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"National Institute of Neurological Disorders and Stroke; National Institutes of Health","keywords":"Biology; Endocrinology; Internal medicine; Embryo; Neurotransmitter; Metabolite; gamma-Aminobutyric acid; GABAergic; Biochemistry; Central nervous system; Medicine; Inhibitory postsynaptic potential; Genetics; Receptor","retraction":null,"screen_n_in":null,"score":{"opus":0.01306249633154289,"gpt":0.2266313024473072,"spread":0.2135688061157643,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002110997,0.0003530846,0.0002870812,0.0001977649,0.0002920901,0.00001735085,0.0003421366,0.0001750976,0.00007103207],"category_scores_gemma":[0.00003962436,0.0003471557,0.00008537275,0.0002599949,0.0001840007,0.00001696677,0.0001827786,0.0001401641,0.00009322615],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003462302,"about_ca_system_score_gemma":0.0006646786,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003149789,"about_ca_topic_score_gemma":0.000904051,"domain_scores_codex":[0.9976974,0.000171371,0.0005500475,0.0007456922,0.0001460969,0.0006893532],"domain_scores_gemma":[0.9994157,0.00001841675,0.0000983778,0.0002598083,0.00005103222,0.0001566699],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003196239,0.00028189,0.2898672,0.00006637476,0.00005204869,0.00006246521,0.001267294,0.0001726394,0.7063407,0.00006995212,0.0002025214,0.001297323],"study_design_scores_gemma":[0.00288365,0.000125407,0.5461175,0.00002140525,0.000009080662,0.0002732787,0.0001666556,0.00001865455,0.4344321,0.0001109683,0.01501634,0.0008248969],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957684,0.001622206,0.00125041,0.00004602158,0.0002317546,0.0003964104,0.00002189509,0.00002898566,0.000633964],"genre_scores_gemma":[0.9908192,0.0005673108,0.00683925,0.0004038071,0.00004590133,0.0001544245,0.000321212,0.00003835461,0.0008106089],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2719086,"threshold_uncertainty_score":0.999898,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2025053472","doi":"10.1186/1471-213x-7-85","title":"Pbx homeodomain proteins pattern both the zebrafish retina and tectum","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health; Howard Hughes Medical Institute","keywords":"Biology; Hindbrain; Axon guidance; Homeobox; Retina; Zebrafish; Neuroscience; Tectum; Retinal ganglion cell; PAX6; Cell biology; Neural tube; Retinal; Hox gene; Neural plate; Axon; Midbrain; Transcription factor; Genetics; Gene; Embryo; Central nervous system","retraction":null,"screen_n_in":null,"score":{"opus":0.00824686708312521,"gpt":0.2317865566995224,"spread":0.2235396896163972,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008194615,0.0002295937,0.000162556,0.00005771954,0.0002650649,0.0000186229,0.0002387427,0.000303736,0.00004093228],"category_scores_gemma":[0.00007224153,0.0001647739,0.00005058378,0.0001229708,0.0003784872,0.000007171603,0.0003131439,0.0001176957,0.00003627754],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003561105,"about_ca_system_score_gemma":0.0001037482,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001752392,"about_ca_topic_score_gemma":0.0005327304,"domain_scores_codex":[0.9985804,0.0001151897,0.0003111542,0.0004792918,0.000079634,0.0004343153],"domain_scores_gemma":[0.9995558,0.0000448603,0.0001026283,0.0001818786,0.00002970624,0.00008515291],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001674193,0.00004152131,0.2884243,0.00001543444,0.00006760725,0.000003985148,0.0001461689,2.499025e-7,0.6704765,0.0003109006,0.0006824499,0.0396635],"study_design_scores_gemma":[0.0007830794,0.0002584837,0.6243817,0.00001282684,0.00000937813,0.0002597618,0.0003617142,0.000002377891,0.3212446,0.0005962828,0.0516897,0.0004001175],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9820499,0.0005206015,0.01439902,0.0002297684,0.0002449198,0.000456257,0.00001349581,0.00002706811,0.002058903],"genre_scores_gemma":[0.9918528,0.00005981423,0.006023373,0.0009038686,0.000154749,0.00004376755,0.0003199924,0.00001872719,0.0006229237],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3492319,"threshold_uncertainty_score":0.6719285,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2073113922","doi":"10.1186/1471-213x-8-51","title":"C. elegans dss-1is functionally conserved and required for oogenesis and larval growth","year":2008,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Center for Research Resources; National Institutes of Health; K. Albin Johanssons Stiftelse; University of Missouri; Magnus Ehrnroothin Säätiö; Institute of Genetics; Academy of Finland; University of Oregon","keywords":"Biology; Larva; Oogenesis; Developmental biology; Zoology; Evolutionary biology; Ecology; Cell biology; Embryogenesis; Embryo","retraction":null,"screen_n_in":null,"score":{"opus":0.03695439448845401,"gpt":0.2419450836730359,"spread":0.2049906891845819,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001604587,0.0001623628,0.0001626087,0.00003873705,0.0002078539,0.000009833176,0.00008534185,0.0001916437,0.00002229789],"category_scores_gemma":[0.0001114736,0.0001523962,0.00004379184,0.00004635724,0.0002417585,0.000006713679,0.0001262086,0.0000365153,0.000007005102],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001232195,"about_ca_system_score_gemma":0.0001785995,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001495661,"about_ca_topic_score_gemma":0.00008884872,"domain_scores_codex":[0.9990717,0.00005635706,0.0001878121,0.0003923734,0.00004513699,0.0002466513],"domain_scores_gemma":[0.9996645,0.00004486311,0.00005283453,0.00007929623,0.0000670271,0.00009145265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003176456,0.0000282468,0.1999627,0.0000364729,0.0000638761,0.000002214477,0.00005781525,6.990523e-8,0.7972065,0.0007197011,0.0008307625,0.0007740406],"study_design_scores_gemma":[0.002828141,0.0007646874,0.1432496,0.00001234812,0.00002494607,0.0007876239,0.0001454505,0.00001230113,0.8029422,0.0009267009,0.04772956,0.0005765024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996129,0.0009742973,0.001736056,0.0001063604,0.0001136012,0.0003040523,0.0001069204,0.00001872459,0.0005109682],"genre_scores_gemma":[0.9761799,0.000393331,0.02131532,0.0006311596,0.0001249418,0.0001230405,0.0004697093,0.00001896326,0.0007436484],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05671312,"threshold_uncertainty_score":0.6214537,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2043351969","doi":"10.1186/s12861-014-0045-6","title":"Generation of cell type-specific monoclonal antibodies for the planarian and optimization of sample processing for immunolabeling","year":2014,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Planarian Biology and Electrostimulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; University of Illinois at Urbana-Champaign; National Institutes of Health; Canadian Mennonite University; San Diego State University; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Howard Hughes Medical Institute","keywords":"Planarian; Immunolabeling; Biology; Monoclonal antibody; Epitope; Cell biology; Antigen; Antibody; Regeneration (biology); Immunology; Immunohistochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.0399857942488716,"gpt":0.2635230998054834,"spread":0.2235373055566118,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002414864,0.00006954739,0.00009832036,0.00002442731,0.0001151858,0.000004576536,0.00006040389,0.0001112217,0.000001804459],"category_scores_gemma":[0.0001124889,0.00005347336,0.00002012622,0.00003320956,0.00007192218,0.000004789527,0.00002173539,0.00001862825,9.078934e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000520461,"about_ca_system_score_gemma":0.00005103833,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003748224,"about_ca_topic_score_gemma":0.00002003196,"domain_scores_codex":[0.9995347,0.00003187815,0.0001707231,0.0001459786,0.00001728754,0.00009948486],"domain_scores_gemma":[0.9996293,0.0001210364,0.000108494,0.00004868129,0.0000831576,0.00000939045],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003092374,0.00001400641,0.009929866,0.00003239256,0.00002214099,3.512706e-9,0.00004890663,0.002565166,0.9830165,0.0004263315,0.0001256027,0.003509856],"study_design_scores_gemma":[0.0009874911,0.0004969647,0.003454753,0.000009592784,0.00002227425,0.000004488013,0.00006534238,0.06047954,0.9278002,0.0003018912,0.00623012,0.0001473443],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3319681,0.0008364711,0.6668049,0.00004960038,0.00007312359,0.0002059212,0.00004579764,0.000002438299,0.00001370894],"genre_scores_gemma":[0.8692797,0.0001220915,0.128848,0.00006247147,0.00006702112,0.00001692522,0.001585531,0.000005719682,0.00001255993],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.5379569,"threshold_uncertainty_score":0.218058,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1564127197","doi":"10.1186/1471-213x-6-10","title":"High resolution ultrasound-guided microinjection for interventional studies of early embryonic and placental development in vivoin mice","year":2006,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":38,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Ivey Foundation","keywords":"Microinjection; Biology; Developmental biology; Embryonic stem cell; Embryology; Ultrasound; Embryogenesis; Embryo; High resolution; Cell biology; Andrology; Anatomy; Medicine; Genetics; Radiology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02492185423179923,"gpt":0.2604954707900045,"spread":0.2355736165582053,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001524669,0.0001337004,0.0001891749,0.0001302033,0.00007270265,0.00000840641,0.00006909605,0.00008451988,0.000009436866],"category_scores_gemma":[0.0000207891,0.0001356722,0.00003471622,0.0001246656,0.00008408375,0.00008126068,0.00002624689,0.00005599568,0.000007054163],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002349004,"about_ca_system_score_gemma":0.00004733804,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008885255,"about_ca_topic_score_gemma":0.001615649,"domain_scores_codex":[0.999172,0.00002095435,0.0003800307,0.0001882467,0.00004607252,0.0001926387],"domain_scores_gemma":[0.999694,0.0001552219,0.00005257626,0.00004291123,0.00003624956,0.00001901553],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006117452,0.0001181611,0.08621996,0.000174372,0.00009375538,2.365028e-7,0.0005318813,0.0002340758,0.9061714,0.005215505,0.0005757664,0.0006036508],"study_design_scores_gemma":[0.003354984,0.0001715394,0.7071682,0.0001814045,0.00003075203,0.0001884815,0.001141471,0.0001699998,0.276632,0.004933653,0.00534945,0.0006781369],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923459,0.0009290206,0.006061298,0.00001169981,0.0001624888,0.0003094213,0.00003501456,0.00005248006,0.0000926197],"genre_scores_gemma":[0.9534792,0.00004221947,0.0459575,0.000007467397,0.00003190625,0.0001537057,0.0002017773,0.00001383859,0.0001123677],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6295395,"threshold_uncertainty_score":0.5532552,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1481373594","doi":"10.1186/1471-213x-3-9","title":"Expression of the Hsp23 chaperone during Drosophila embryogenesis: association to distinct neural and glial lineages","year":2003,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Biology; Developmental biology; Drosophila (subgenus); Neural development; Embryogenesis; Genetics; Chaperone (clinical); Cell biology; Evolutionary biology; Embryo; Gene; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.01478318591324175,"gpt":0.2635313012507859,"spread":0.2487481153375442,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002213844,0.0001191037,0.0001317957,0.00003604496,0.0001382491,0.000009369429,0.0001640235,0.0001624515,0.00001889985],"category_scores_gemma":[0.0006473213,0.00008819376,0.00003906298,0.0001059675,0.00005872298,0.000004426482,0.0003192431,0.00007012983,0.000005663466],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005419939,"about_ca_system_score_gemma":0.000102525,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009292788,"about_ca_topic_score_gemma":0.000056954,"domain_scores_codex":[0.9988987,0.0002143181,0.000209091,0.0002943321,0.0001190692,0.0002644545],"domain_scores_gemma":[0.9996442,0.00002415162,0.00006416623,0.0001433194,0.00005127064,0.00007285718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005204769,0.0000195365,0.1840103,0.00001486185,0.000008934641,3.073595e-7,0.00003166191,0.000002349557,0.8155953,0.00001843172,0.0000246928,0.0002215556],"study_design_scores_gemma":[0.0003020797,0.00007344616,0.1834738,0.00000974466,0.000002422074,0.00001062663,0.00004098897,0.000002094724,0.8149347,0.00001198475,0.001043564,0.00009458596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989359,0.0002008486,0.00008745104,0.00008871631,0.000121474,0.0002973939,0.00001915214,0.000006243196,0.0002427999],"genre_scores_gemma":[0.9973419,0.00002618129,0.001659345,0.00005681136,0.00006447129,0.00005160889,0.00001879831,0.00001235388,0.0007684707],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001593962,"threshold_uncertainty_score":0.3596437,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2056367670","doi":"10.1186/1471-213x-8-99","title":"Varicose: a MAGUK required for the maturation and function of Drosophila septate junctions","year":2008,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Connexins and lens biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Septate junctions; Cell biology; Morphogenesis; Neuroepithelial cell; Neuroblast; PDZ domain; Scaffold protein; Anatomy; Signal transduction; Stem cell; Genetics; Neurogenesis; Neural stem cell; Gap junction; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02823357721705195,"gpt":0.247288335961429,"spread":0.2190547587443771,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001739192,0.0001091208,0.0001189894,0.00003554681,0.000198184,0.000004114738,0.00008263352,0.0001467686,0.00001905835],"category_scores_gemma":[0.00007884495,0.00007776036,0.00005478561,0.0000695655,0.0002300878,0.000005126808,0.00007817442,0.00003988684,0.000004105473],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001031119,"about_ca_system_score_gemma":0.00009512801,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000130471,"about_ca_topic_score_gemma":0.00008360881,"domain_scores_codex":[0.999312,0.00005750736,0.000203535,0.0002448468,0.00002895832,0.0001531925],"domain_scores_gemma":[0.9996498,0.00006101514,0.0000831668,0.0001159818,0.0000632119,0.00002678267],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009727844,0.00006129732,0.01093196,0.00001691289,0.0001040363,3.533161e-7,0.00009030865,0.000003613108,0.9767553,0.002255567,0.001423062,0.007384799],"study_design_scores_gemma":[0.002962162,0.002677483,0.4976104,0.00001102107,0.00009264569,0.0004478855,0.0004874291,0.0002436169,0.09167408,0.001866646,0.4013887,0.0005378987],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9721397,0.0008936223,0.02559485,0.0001632152,0.0004573612,0.0003476359,0.0000404788,0.00001157039,0.0003515744],"genre_scores_gemma":[0.9946932,0.0002594255,0.003680152,0.0003179135,0.0001212069,0.0000831029,0.0002667258,0.000009229288,0.0005691063],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8850812,"threshold_uncertainty_score":0.3170975,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2034854114","doi":"10.1186/s12861-014-0046-5","title":"Isoform-specific functions of Mud/NuMA mediate binucleation of Drosophilamale accessory gland cells","year":2014,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics","keywords":"Cytokinesis; Mitosis; Biology; Cell biology; Spindle apparatus; Cell division; Spindle pole body; Cell cycle; Cell; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01274749099042656,"gpt":0.2255936964016183,"spread":0.2128462054111918,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000326869,0.0001823402,0.0002523047,0.0001154124,0.0000870243,0.000004772496,0.0002155429,0.0003010056,0.0001059259],"category_scores_gemma":[0.00004101369,0.0001666466,0.00008403275,0.0001578325,0.0002762614,0.00001324049,0.0001625272,0.0000587365,0.00004976316],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002371491,"about_ca_system_score_gemma":0.00009745,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005524753,"about_ca_topic_score_gemma":0.00005032,"domain_scores_codex":[0.9987386,0.0001124939,0.00047512,0.0003562935,0.00008651269,0.000230955],"domain_scores_gemma":[0.9993837,0.00003515784,0.0002493396,0.000184822,0.00009047223,0.00005653145],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001670669,0.00006306377,0.07473829,0.0000282515,0.00004868138,1.019416e-7,0.00006083466,0.00001707121,0.9180381,0.0004801522,0.0004390076,0.005919433],"study_design_scores_gemma":[0.0008389263,0.0002930505,0.1395148,0.00001345929,0.00001038048,0.0000115617,0.00008863665,0.00001605978,0.8412919,0.0005596757,0.01713892,0.0002226373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990792,0.0002438681,0.005386051,0.00003039724,0.0004880382,0.00018647,0.00005059037,0.00001330672,0.002809325],"genre_scores_gemma":[0.9916748,0.0001397982,0.00642922,0.00006380298,0.0001028983,0.00001857064,0.001125311,0.00001507327,0.0004305095],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07674614,"threshold_uncertainty_score":0.6795653,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1995173605","doi":"10.1186/1471-213x-7-94","title":"Analysis of the Rana catesbeiana tadpole tail fin proteome and phosphoproteome during T3-induced apoptosis: identification of a novel type I keratin","year":2007,"lang":"en","type":"article","venue":"BMC Developmental Biology","topic":"Skin and Cellular Biology Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Genome British Columbia; Michael Smith Health Research BC; University of Victoria","keywords":"Biology; Proteome; Metamorphosis; Proteomics; Cell biology; Molecular biology; Biochemistry; Larva; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01936468758538294,"gpt":0.2752475924382611,"spread":0.2558829048528782,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006638831,0.0001437911,0.0002544557,0.000160981,0.0001011148,0.000007309702,0.0002816417,0.000237279,0.00002310819],"category_scores_gemma":[0.0001995577,0.0001100465,0.0001005662,0.0006569762,0.0002520792,0.000004721523,0.0002437676,0.00009367544,0.000002284127],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002714765,"about_ca_system_score_gemma":0.0001565318,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000081187,"about_ca_topic_score_gemma":0.0002460429,"domain_scores_codex":[0.9987122,0.0000797901,0.0004682506,0.0003667212,0.0001059829,0.0002671009],"domain_scores_gemma":[0.999314,0.00002361745,0.0002227906,0.0002637754,0.0001243691,0.00005151649],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001896624,0.00006682407,0.1082396,0.00002611349,0.0003011797,2.504459e-7,0.00009732266,0.000003063227,0.8906018,0.00005160706,0.000003298938,0.0004193261],"study_design_scores_gemma":[0.0004865428,0.00007667991,0.1835782,0.000007103426,0.00005000078,0.00001031154,0.0002172868,0.00002488083,0.8153809,0.000007469153,0.00005407447,0.0001064707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979919,0.0003539227,0.001006329,0.00002650224,0.0000832624,0.0004046602,0.00002789219,0.000004821318,0.0001006641],"genre_scores_gemma":[0.9983315,0.00004119766,0.001102875,0.0000220681,0.00002194545,0.00002897716,0.0001596348,0.00001027815,0.0002814911],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07533866,"threshold_uncertainty_score":0.4487566,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}