{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":28,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":28,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"1ceed90fe4fa","filters":{"venue":"Biological Research"}},"results":[{"id":"W2784229669","doi":"10.1186/s40659-018-0152-0","title":"Regulation of aquaporins in plants under stress","year":2018,"lang":"en","type":"review","venue":"Biological Research","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":440,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"University of Jaffna; University of Alberta","keywords":"Aquaporin; Cell biology; Water transport; Vacuole; Biology; Membrane; Gating; Aquaporin 1; Plant cell; Biochemistry; Water flow; Chemistry; Biophysics; Gene; Water channel; Cytoplasm","retraction":null,"screen_n_in":null,"score":{"opus":0.2945054139078757,"gpt":0.4545783833425168,"spread":0.1600729694346411,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008763368,0.0001760198,0.0004977261,0.0001953863,0.00004060122,0.00000831011,0.0003053793,0.0008060728,0.00007872622],"category_scores_gemma":[0.0001039687,0.0001212235,0.0001764695,0.0002557684,0.0002696904,0.000001775513,0.0001031947,0.000241955,0.00002838074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000340104,"about_ca_system_score_gemma":0.0001617856,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001878445,"about_ca_topic_score_gemma":0.00004880097,"domain_scores_codex":[0.9981348,0.0003631259,0.000443228,0.0004484577,0.0002758425,0.0003345275],"domain_scores_gemma":[0.9993007,0.00006986052,0.0001166144,0.0003201508,0.0001302943,0.00006242452],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004573191,0.0007300717,0.001435293,0.007296555,0.0002199685,0.00001799144,0.00005640186,0.00001942534,0.008442092,0.002058245,0.002408413,0.9768582],"study_design_scores_gemma":[0.0002192133,0.0005744883,0.004702086,0.002233523,0.0000120925,0.000004537007,0.00003688784,0.000004500736,0.001865722,0.0005191954,0.9895825,0.0002452753],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01652057,0.9820025,0.00005924098,0.000008340853,0.00009774324,0.0004974724,0.00009096967,0.000005692221,0.0007174508],"genre_scores_gemma":[0.05205747,0.9450634,0.00002909954,0.000002596383,0.0003585019,0.00004584761,0.001871846,0.00001570224,0.000555528],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9871741,"threshold_uncertainty_score":0.6217172,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1974390938","doi":"10.4067/s0716-97602005000400011","title":"Oligodendrocytes damage in Alzheimer's disease: Beta amyloid toxicity and inflammation","year":2005,"lang":"en","type":"review","venue":"Biological Research","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":131,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Microglia; Astrocyte; Inflammation; Proinflammatory cytokine; Oligodendrocyte; Amyloid beta; Alzheimer's disease; Biology; Neuroscience; Immunology; Myelin; Medicine; Pathology; Central nervous system; Peptide; Disease; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.2607311262856011,"gpt":0.4725459587214619,"spread":0.2118148324358607,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001461059,0.0004966797,0.001542952,0.0007321709,0.0001978475,0.0001019485,0.0003579999,0.0005677282,0.0004473358],"category_scores_gemma":[0.0009293654,0.0003118526,0.0003445451,0.0008436335,0.0006822307,0.0001230487,0.0005963943,0.001398202,0.0005567812],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003505569,"about_ca_system_score_gemma":0.0009731548,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004735135,"about_ca_topic_score_gemma":0.00002633943,"domain_scores_codex":[0.9948286,0.001264643,0.0006663562,0.001001486,0.001081076,0.001157769],"domain_scores_gemma":[0.9965584,0.001146233,0.000105108,0.0006417117,0.0002050153,0.001343553],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000310503,0.0006695885,0.002495826,0.001795106,0.001965279,0.001032371,0.00001009205,7.650219e-8,0.000001763333,0.0004172041,0.0003175605,0.9909846],"study_design_scores_gemma":[0.001716207,0.0009413669,0.02452274,0.007566313,0.001250364,0.00005171383,0.00002474046,0.00003586888,0.00001853744,0.0003000647,0.9629952,0.0005768312],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.004275051,0.9910164,4.815012e-7,0.0002808759,0.00002007454,0.002738936,0.0001667866,0.00006267045,0.00143872],"genre_scores_gemma":[0.01212036,0.9856572,0.00007975967,0.00001800035,0.0004606273,0.0006545927,0.0008811157,0.00004375785,0.00008460166],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9904078,"threshold_uncertainty_score":0.9999334,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2891747209","doi":"10.1186/s40659-018-0182-7","title":"Increased ROS production and DNA damage in monocytes are biomarkers of aging and atherosclerosis","year":2018,"lang":"en","type":"article","venue":"Biological Research","topic":"Atherosclerosis and Cardiovascular Diseases","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Fundação de Amparo à Pesquisa e Inovação do Espírito Santo; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Oxidative stress; Apolipoprotein E; Proinflammatory cytokine; DNA damage; Apoptosis; Immunology; Monocyte; Reactive oxygen species; Apolipoprotein B; Inflammation; Biology; Medicine; Endocrinology; Internal medicine; DNA; Cell biology; Cholesterol; Genetics; Disease","retraction":null,"screen_n_in":null,"score":{"opus":0.1003374516419389,"gpt":0.3289111103941789,"spread":0.22857365875224,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001487579,0.0001100808,0.0002557476,0.0001323398,0.0001774264,0.00001817257,0.0001256047,0.0001901665,0.0001084092],"category_scores_gemma":[0.001013835,0.00007835952,0.00005796219,0.0002595766,0.001622456,0.00005350785,0.0002273592,0.0001771808,0.00001692503],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002377154,"about_ca_system_score_gemma":0.00002151691,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000233372,"about_ca_topic_score_gemma":0.00004784864,"domain_scores_codex":[0.9982342,0.0007697932,0.0001826435,0.0004115432,0.00006668621,0.0003351876],"domain_scores_gemma":[0.9993417,0.0002200639,0.00004806394,0.0002249299,0.000125219,0.00004007562],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001081521,0.00008118097,0.3515327,0.00001667787,0.00006053513,5.576196e-7,0.00008035226,4.346747e-8,0.6442941,0.00007315395,0.0001554938,0.003597032],"study_design_scores_gemma":[0.0004254591,0.0002505552,0.8584536,0.000103689,0.000007826296,0.000002668282,0.0006201423,0.000002947379,0.1394742,0.0001097652,0.0004663822,0.00008272308],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943424,0.005052852,0.000005520593,0.0001277358,0.00004911425,0.0002639817,0.00001923523,0.0000212429,0.0001179244],"genre_scores_gemma":[0.9981418,0.001673523,0.00003400187,0.00001769881,0.00003565153,0.00003302884,0.000009900401,0.000007673506,0.00004675896],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5069209,"threshold_uncertainty_score":0.5978009,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3190742107","doi":"10.1186/s40659-021-00342-6","title":"Molecules linked to Ras signaling as therapeutic targets in cardiac pathologies","year":2021,"lang":"en","type":"review","venue":"Biological Research","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Signal transduction; Biology; Computational biology; Cancer research; Cell biology; Medicine; Bioinformatics; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.2016414554671613,"gpt":0.4506466849569322,"spread":0.249005229489771,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002645863,0.0004159379,0.001227249,0.0003065679,0.0001442707,0.00009586996,0.0005997623,0.001082769,0.0001196591],"category_scores_gemma":[0.002526831,0.0003008143,0.0005673696,0.0007348859,0.0002066763,0.000002496751,0.0008089849,0.0007763091,0.0001517559],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009504276,"about_ca_system_score_gemma":0.0005591538,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001699016,"about_ca_topic_score_gemma":0.000003337489,"domain_scores_codex":[0.9943224,0.002731026,0.0005724411,0.001105362,0.0004323032,0.0008364728],"domain_scores_gemma":[0.9984879,0.0003174216,0.00009508556,0.000607984,0.0002662286,0.0002253288],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005318482,0.0001172909,0.00002528308,0.0008243119,0.0001300326,0.0002297586,0.00002868249,0.00001876357,0.05190838,0.0008584134,0.0003635922,0.9454423],"study_design_scores_gemma":[0.0001161376,0.0004036043,0.00002784255,0.001696193,0.00002137178,0.00001176572,0.0000745545,0.000001668034,0.003194471,0.0002851454,0.9937474,0.0004198555],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001071349,0.9966476,0.000333504,0.0000709257,0.00009974463,0.001272695,0.00004334551,0.00002594173,0.000434895],"genre_scores_gemma":[0.004294019,0.9927582,0.0007019966,0.0001316068,0.0003602094,0.0006230509,0.000746024,0.0000460132,0.0003388477],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9933838,"threshold_uncertainty_score":0.9999444,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2125367249","doi":"10.4067/s0716-97602007000100006","title":"Influence of time at which oxytocin is administered during labor on uterine activity and perinatal death in pigs","year":2007,"lang":"en","type":"article","venue":"Biological Research","topic":"Neuroendocrine regulation and behavior","field":"Psychology","cited_by":50,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children","funders":"Sistema Nacional de Investigadores; Directorate for Biological Sciences; Universidad Autónoma Metropolitana; Consejo Nacional de Ciencia y Tecnología","keywords":"Oxytocin; Medicine; Meconium; Saline; Fetus; Offspring; Obstetrics; Uterine contraction; Pregnancy; Uterus; Internal medicine; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.1544621110217766,"gpt":0.4795116886369647,"spread":0.3250495776151882,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000501127,0.0001017851,0.0001797145,0.0001788864,0.00006554873,0.000009643904,0.0001522914,0.00009242566,0.001086884],"category_scores_gemma":[0.0002747304,0.00007622202,0.00002431303,0.0003428752,0.0001594713,0.00003393375,0.0002643379,0.000307343,0.0001305779],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006298014,"about_ca_system_score_gemma":0.00001512445,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008777589,"about_ca_topic_score_gemma":0.00003792251,"domain_scores_codex":[0.9985126,0.0002412426,0.0001919885,0.0003773243,0.0002408969,0.0004359354],"domain_scores_gemma":[0.9991227,0.0003810066,0.00003715761,0.0002372946,0.0001019936,0.0001198073],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00201501,0.00025912,0.5812453,0.00002135162,0.0000048832,0.0002518489,0.0001011134,7.14629e-7,0.4134668,0.0002566085,0.00004426531,0.002332924],"study_design_scores_gemma":[0.0006714016,0.0008292731,0.9613778,0.00001449254,6.265714e-7,0.00003823177,0.00001216226,0.000003186884,0.03548895,0.00001482854,0.001477404,0.00007163905],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981191,0.0000228983,2.86399e-7,0.0006392957,0.00001794124,0.0002633452,0.00002852814,0.00001903628,0.0008895754],"genre_scores_gemma":[0.9933248,0.00001393308,0.00001570714,0.00003915004,0.00002421775,0.0000214601,0.000002336584,0.000007180086,0.006551237],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3801325,"threshold_uncertainty_score":0.9998263,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3027454151","doi":"10.1186/s40659-020-00291-6","title":"Genome-wide characterization of the abscisic acid-, stress- and ripening-induced (ASR) gene family in wheat (Triticum aestivum L.)","year":2020,"lang":"en","type":"article","venue":"Biological Research","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":40,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministry of Agriculture","funders":"Key Technologies Research and Development Program; National Key Research and Development Program of China; Young Scientists Fund; National Natural Science Foundation of China","keywords":"Abscisic acid; Ripening; Biology; Genome; Gene; Gene family; Stress (linguistics); Botany; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.1281880021312582,"gpt":0.300386850202197,"spread":0.1721988480709388,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003702129,0.0001121783,0.0002121873,0.00001773857,0.000177658,0.00003735496,0.0004065964,0.0001425622,0.000060881],"category_scores_gemma":[0.0007050993,0.00003653011,0.00004998747,0.0006137022,0.0001928674,0.00005974991,0.0002983381,0.0003060828,0.0000107295],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001634192,"about_ca_system_score_gemma":0.00001589411,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001149983,"about_ca_topic_score_gemma":0.00005684787,"domain_scores_codex":[0.9982864,0.0004147523,0.0002350242,0.0003604802,0.0003257626,0.0003776055],"domain_scores_gemma":[0.9991136,0.0005496868,0.0000538888,0.00006263924,0.00008745689,0.0001327093],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001640005,0.00003927807,0.08749906,0.000007849006,0.000002528554,0.00001013584,0.00003371391,8.57826e-7,0.9068297,0.00003606994,0.000004941553,0.005371913],"study_design_scores_gemma":[0.0001306316,0.0003311481,0.9196995,0.00003303023,9.156391e-7,0.000001286388,0.00005587298,0.00007911042,0.07832079,0.00005720081,0.001210935,0.00007954085],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948306,0.0002789439,0.000003574346,0.004197533,0.00002657552,0.0003324308,0.000193237,0.00001582291,0.0001212632],"genre_scores_gemma":[0.9989782,0.000551631,0.00001073846,0.0002521288,0.00009787805,0.0000219341,0.00005417348,8.425672e-7,0.00003249586],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8322005,"threshold_uncertainty_score":0.1489655,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2138096933","doi":"10.1186/s40659-015-0046-3","title":"Antitumor compounds from Streptomyces sp. KML-2, isolated from Khewra salt mines, Pakistan","year":2015,"lang":"en","type":"article","venue":"Biological Research","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"","keywords":"HeLa; Streptomyces; Biology; Artemia salina; Streptomyces griseus; 16S ribosomal RNA; Microbiology; Halophile; Bacteria; Biochemistry; Chemistry; Gene; In vitro; Toxicity","retraction":null,"screen_n_in":null,"score":{"opus":0.1917329934718222,"gpt":0.40753646865252,"spread":0.2158034751806978,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001056473,0.0002194216,0.0004989348,0.0001224808,0.0001442446,0.0001012646,0.000381862,0.0003360828,0.001448756],"category_scores_gemma":[0.002079306,0.0001245423,0.000104096,0.0005087996,0.0004805929,0.00006398442,0.0003024579,0.0006304945,0.0005156739],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001388837,"about_ca_system_score_gemma":0.0001943001,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004135113,"about_ca_topic_score_gemma":0.0001091923,"domain_scores_codex":[0.9972093,0.0004023697,0.000378912,0.0007470924,0.0006237453,0.0006385805],"domain_scores_gemma":[0.9976345,0.0006985755,0.00006227066,0.0005120503,0.000591065,0.0005015262],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002033338,0.0004072842,0.02932478,0.00001426212,0.00009692941,0.0002531942,0.00007624013,7.266234e-8,0.8784183,0.0001202955,0.08216637,0.007088875],"study_design_scores_gemma":[0.003796365,0.003610203,0.15707,0.0003420741,0.00007150295,0.00003514292,0.000988137,0.0002233619,0.241564,0.003882298,0.5876704,0.0007465683],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9880385,0.003573481,0.000007732326,0.00527307,0.0002124454,0.0004373509,0.0002923526,0.0001170141,0.002048048],"genre_scores_gemma":[0.995415,0.000359253,0.001059216,0.0003066859,0.000992849,0.000002676384,0.0006223751,0.00001671789,0.001225253],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6368544,"threshold_uncertainty_score":0.999464,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2161866364","doi":"10.4067/s0716-97602007000200002","title":"The threat from creationism to the rational teaching of biology","year":2007,"lang":"en","type":"article","venue":"Biological Research","topic":"Evolution and Science Education","field":"Arts and Humanities","cited_by":32,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Creationism; Intelligent design; Environmental ethics; Biological evolution; Biology; Philosophy; Epistemology; Evolutionary biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.4215423807069703,"gpt":0.4778114198203269,"spread":0.05626903911335662,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.004217509,0.00003581152,0.00004733519,0.00004132791,0.001478403,0.00009063094,0.0003176478,0.00003353704,0.0006232548],"category_scores_gemma":[0.001773413,0.00001419698,0.00002654032,0.00005537733,0.0007763393,0.00003306191,0.0000677477,0.0001960747,0.0001521063],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003081925,"about_ca_system_score_gemma":0.000050629,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008708328,"about_ca_topic_score_gemma":0.001259058,"domain_scores_codex":[0.999017,0.0002937884,0.0001445199,0.0001228098,0.0002083214,0.0002135827],"domain_scores_gemma":[0.9971032,0.002480931,0.00002427788,0.00013834,0.0002080631,0.00004521977],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002042864,0.00002496658,0.002877731,1.833807e-7,0.000002934045,5.889051e-8,0.00452716,7.219887e-7,0.001508986,0.9735637,0.006662429,0.01081073],"study_design_scores_gemma":[0.00004553327,0.0001554251,0.08255295,0.000003344456,6.689287e-7,1.676392e-7,0.008925661,0.00003619367,0.0002219113,0.05669214,0.8513296,0.00003644338],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8832114,0.0002729844,0.0009568091,0.02344178,0.0005259418,0.0002519056,0.00001838053,0.0000162773,0.0913045],"genre_scores_gemma":[0.9944327,0.00002160727,0.00009842002,0.0002034436,0.0007210265,0.00001523978,0.00001520416,0.000001302335,0.004491066],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9168715,"threshold_uncertainty_score":0.9998215,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2118005568","doi":"10.4067/s0716-97602002000200014","title":"Phospholipid synthesis, diacylglycerol compartmentation, and apoptosis","year":2002,"lang":"en","type":"review","venue":"Biological Research","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"","keywords":"Diacylglycerol kinase; Cell biology; Apoptosis; Biology; Protein kinase C; Signal transduction; Second messenger system; Kinase; Protein kinase A; Cancer cell; Programmed cell death; Biochemistry; Cancer; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.2538226407156208,"gpt":0.4288853091419731,"spread":0.1750626684263523,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001198649,0.0004200036,0.001074246,0.000155993,0.0002870222,0.0001002743,0.0005634264,0.000804075,0.0002548383],"category_scores_gemma":[0.001396342,0.0002656119,0.0003065698,0.0002927217,0.0004938736,0.000003523321,0.00056761,0.0004091451,0.0002997401],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003038508,"about_ca_system_score_gemma":0.0001096303,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009627212,"about_ca_topic_score_gemma":0.000001780833,"domain_scores_codex":[0.9963962,0.001089145,0.0005024117,0.0009555042,0.0003703242,0.0006863446],"domain_scores_gemma":[0.998314,0.0005742104,0.0001281911,0.0005731067,0.0001351079,0.0002754101],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002245506,0.0001324108,0.00003319957,0.0009172854,0.0001323661,0.000001386812,0.000006927064,9.725142e-9,0.0005552802,0.00005592544,0.006929332,0.9912134],"study_design_scores_gemma":[0.00009697561,0.0001361538,0.00003532117,0.0004650441,0.00008343588,0.000009167596,0.0000124095,2.320402e-7,0.005306806,0.000009731575,0.9935182,0.0003265744],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00167828,0.9964129,0.000007390964,0.00002911446,0.0001371011,0.0007072354,0.0001154371,0.00002161201,0.0008908961],"genre_scores_gemma":[0.002299825,0.9948815,0.0001707533,0.00003650435,0.001049743,0.0005422703,0.00026492,0.00003973048,0.000714789],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9908869,"threshold_uncertainty_score":0.9999796,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2155208885","doi":"10.4067/s0716-97602005000100011","title":"IP3 production in the hypersensitive response of lemon seedlings against Alternaria alternata involves active protein tyrosine kinases but not a G-protein","year":2005,"lang":"en","type":"article","venue":"Biological Research","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"","keywords":"Mastoparan; Alternaria alternata; Biology; Signal transduction; Tyrosine kinase; Biochemistry; Phospholipase C; Hypersensitive response; Kinase; G protein; Botany; Programmed cell death","retraction":null,"screen_n_in":null,"score":{"opus":0.1588113115676366,"gpt":0.394787755224973,"spread":0.2359764436573364,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003158855,0.0001450803,0.0002714233,0.0001935566,0.0001600426,0.00001269667,0.0002679863,0.0002175817,0.00002655243],"category_scores_gemma":[0.005822089,0.00008276603,0.00007238553,0.0005238499,0.0008253896,0.0000650106,0.0001411274,0.0008087438,0.00006299146],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001218378,"about_ca_system_score_gemma":0.0001331984,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001857582,"about_ca_topic_score_gemma":0.00003538689,"domain_scores_codex":[0.9971899,0.00121999,0.0003101652,0.000494537,0.0003801245,0.0004052541],"domain_scores_gemma":[0.9982777,0.0008071376,0.00008625922,0.0004180515,0.0003297584,0.00008105033],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.009949651,0.0004860227,0.001217414,0.00001901847,0.00001951226,0.00003406646,0.0003744353,0.000002902448,0.9819396,0.0007447076,0.000120786,0.005091874],"study_design_scores_gemma":[0.0005917285,0.001229284,0.09537505,0.0001693813,0.000004935763,0.00001818574,0.001251833,0.00005190505,0.8994264,0.0002262831,0.001563376,0.00009164189],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9755398,0.0001734432,0.000005267164,0.02174567,0.00001620356,0.002037348,0.00004787446,0.00002734624,0.0004070191],"genre_scores_gemma":[0.9976305,0.00008789461,0.0004413467,0.0003804972,0.0003127198,0.0004140168,0.00005219362,0.000008698208,0.0006721072],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09415764,"threshold_uncertainty_score":0.6970004,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4388537578","doi":"10.1186/s40659-023-00465-y","title":"Heat-responsive microRNAs participate in regulating the pollen fertility stability of CMS-D2 restorer line under high-temperature stress","year":2023,"lang":"en","type":"article","venue":"Biological Research","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministry of Agriculture","funders":"Natural Science Foundation of Henan Province; Chinese Academy of Agricultural Sciences","keywords":"Biology; Transcriptome; microRNA; Cytoplasmic male sterility; Gene; Genetics; Pollen; Gene expression; Heat shock protein; Gene expression profiling; KEGG; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.180669540183118,"gpt":0.4042169920877085,"spread":0.2235474519045905,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004292917,0.000182635,0.0003073641,0.0001036974,0.0001585377,0.00001705914,0.0005083687,0.0004461932,0.0000589777],"category_scores_gemma":[0.004905906,0.0001067605,0.00009098323,0.0006923078,0.001009208,0.000003901835,0.0007321569,0.0005515762,0.0000172694],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006192616,"about_ca_system_score_gemma":0.0001767851,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000320428,"about_ca_topic_score_gemma":0.0003151616,"domain_scores_codex":[0.9952927,0.002408136,0.0004101676,0.0008588328,0.0002928718,0.0007373065],"domain_scores_gemma":[0.9979049,0.0007128689,0.00004373191,0.0008467181,0.0003905791,0.0001011831],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001799319,0.0001196527,0.05326758,0.00001710302,0.0000297753,0.000008712205,0.00005472347,0.00006833277,0.9439045,0.0001529003,0.0003719095,0.0002055268],"study_design_scores_gemma":[0.000228164,0.0003915856,0.5061203,0.00001339661,0.000001744866,0.000001434401,0.0002526365,0.00001057968,0.4917342,0.0005630454,0.0005998609,0.00008309187],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957321,0.0005577329,0.000001635328,0.002740607,0.0001215534,0.0005276081,0.0002299242,0.00002065743,0.00006818657],"genre_scores_gemma":[0.9988933,0.0001815773,0.00004177129,0.00006989735,0.0001873874,0.00008687326,0.0002775136,0.00001195667,0.0002497726],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4528527,"threshold_uncertainty_score":0.5873182,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4283642465","doi":"10.1186/s40659-022-00392-4","title":"Zinc oxide nanoparticles synthesized using Hyssopus Officinalis L. Extract Induced oxidative stress and changes the expression of key genes involved in inflammatory and antioxidant Systems","year":2022,"lang":"en","type":"article","venue":"Biological Research","topic":"Nanoparticles: synthesis and applications","field":"Materials Science","cited_by":22,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Innovation Cluster (Canada)","funders":"Islamic Azad University, Mashhad Branch; Islamic Azad University","keywords":"Oxidative stress; Creatinine; Antioxidant; Chemistry; Lipid peroxidation; Pharmacology; Kidney; Officinalis; Zinc; Biochemistry; Endocrinology; Medicine; Traditional medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.1745153094121604,"gpt":0.3554127703762596,"spread":0.1808974609640993,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003885762,0.0001138592,0.0002509358,0.0001116133,0.0004733728,0.00008654362,0.0002999283,0.00006289513,0.00004268279],"category_scores_gemma":[0.0006536771,0.00006802655,0.00002026713,0.000304604,0.0004434314,0.00007197817,0.0005650147,0.0001868107,0.000001735248],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005270147,"about_ca_system_score_gemma":0.00005461711,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005001067,"about_ca_topic_score_gemma":0.00005682631,"domain_scores_codex":[0.9965415,0.001989344,0.0003197412,0.0003641076,0.0004209321,0.0003643679],"domain_scores_gemma":[0.9975657,0.001867241,0.0001355733,0.0002559915,0.00009276537,0.00008272898],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001644368,0.0001263623,0.01178877,0.00003400353,0.000003027651,0.000005684914,0.0003183107,0.00003895684,0.9860027,0.0009551397,0.000003331356,0.0005592063],"study_design_scores_gemma":[0.0001967151,0.0001317388,0.03575955,0.0000934096,0.000003837846,0.000003635681,0.004309992,0.0005256953,0.9586532,0.0001562052,0.00007689225,0.00008919504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968171,0.00227673,0.000004737488,0.0002213612,0.00002143665,0.0005839856,0.00004985618,0.00001770781,0.000007147395],"genre_scores_gemma":[0.9992551,0.0002478809,0.0001700219,0.000008245793,0.00002204802,0.000282657,0.000001368298,0.000008079075,0.000004577021],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02734963,"threshold_uncertainty_score":0.3640849,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2039223391","doi":"10.4067/s0716-97602013000200011","title":"Protective effects of lycopene on oxidative stress, proliferation and autophagy in iron supplementation rats","year":2013,"lang":"en","type":"article","venue":"Biological Research","topic":"Iron Metabolism and Disorders","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Hong Kong Polytechnic University; University of Toronto","keywords":"Lycopene; Oxidative stress; Malondialdehyde; Autophagy; Lipid peroxidation; Antioxidant; Superoxide dismutase; Chemistry; Biochemistry; Endocrinology; Apoptosis; Internal medicine; Biology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.0584383257113412,"gpt":0.3883422507695366,"spread":0.3299039250581954,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004380155,0.00007433412,0.0001685698,0.0001411018,0.00004418843,0.00001348602,0.0000440664,0.00009215187,0.0001986675],"category_scores_gemma":[0.001221235,0.00004672326,0.00001525007,0.0001985552,0.000161568,0.00006930167,0.00004686957,0.0002125927,0.0000325806],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000353666,"about_ca_system_score_gemma":0.00004789584,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003021405,"about_ca_topic_score_gemma":0.00002255702,"domain_scores_codex":[0.9987217,0.0004199605,0.000149373,0.0002256881,0.0002641553,0.0002191583],"domain_scores_gemma":[0.9993224,0.0003514558,0.00002963019,0.00009437097,0.0001351274,0.00006706841],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001479872,0.0009965196,0.06408373,0.0005039079,0.000009920442,0.00001442193,0.0008062008,0.000003661942,0.8737575,0.004798611,0.0005724433,0.05297321],"study_design_scores_gemma":[0.001407954,0.002152012,0.6385235,0.00005933401,0.000002336739,4.170468e-7,0.0003179134,0.00004363728,0.3560615,0.00136532,0.0000235848,0.0000424711],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956262,0.0002117631,0.00003531015,0.0005033737,0.00001536997,0.002887174,0.000004801785,0.000008371957,0.0007076034],"genre_scores_gemma":[0.9988628,0.0001699435,0.0001909173,0.00006091121,0.00003024624,0.0005318351,0.00004524902,0.000004215728,0.0001039054],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5744398,"threshold_uncertainty_score":0.217527,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2152650191","doi":"10.1186/s40659-015-0033-8","title":"CD4+ T cells in aged or thymectomized recipients of allogeneic stem cell transplantations","year":2015,"lang":"en","type":"article","venue":"Biological Research","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Thymectomy; Immunology; Chimera (genetics); Hematopoietic stem cell transplantation; Stem cell; Haematopoiesis; Immune system; Effector; Medicine; T cell; Graft-versus-host disease; Immunity; Transplantation; Biology; Internal medicine; Cell biology; Myasthenia gravis","retraction":null,"screen_n_in":null,"score":{"opus":0.1943729749520502,"gpt":0.3579490333470768,"spread":0.1635760583950266,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.002096614,0.000187089,0.0005005814,0.0003102342,0.0001237808,0.00001013639,0.0006230865,0.000641246,0.001057586],"category_scores_gemma":[0.0001810401,0.0001170663,0.000102972,0.00052696,0.0007376918,0.00004309448,0.0001802932,0.0008045613,0.001357583],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008212496,"about_ca_system_score_gemma":0.0002380298,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002576949,"about_ca_topic_score_gemma":0.000118985,"domain_scores_codex":[0.9957505,0.002344315,0.0005345335,0.0004673668,0.00011266,0.0007906101],"domain_scores_gemma":[0.9978989,0.001398537,0.00008973234,0.0003454312,0.0001961348,0.00007121281],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003689073,0.0006653883,0.005243964,0.00001580159,0.000042208,0.00004169797,0.0005402857,0.000005150616,0.986653,0.0001150406,0.001713973,0.001274469],"study_design_scores_gemma":[0.006960856,0.001774403,0.005005048,0.00003448948,0.00001073413,0.00001955179,0.001005005,0.000002367598,0.974044,0.0002796469,0.01066426,0.0001996445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993863,0.002165681,0.0000280385,0.0001009238,0.000418986,0.0005185147,0.00007953009,0.00004145797,0.002783904],"genre_scores_gemma":[0.9894509,0.0009571018,0.0001073482,0.00003584717,0.0000173993,0.00007662088,0.0001127102,0.00001201295,0.009230052],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01260895,"threshold_uncertainty_score":0.9998556,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4384068001","doi":"10.1186/s40659-023-00449-y","title":"Beyond energy provider: multifunction of lipid droplets in embryonic development","year":2023,"lang":"en","type":"review","venue":"Biological Research","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministry of Agriculture","funders":"Fundamental Research Funds for the Central Universities; National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Embryonic stem cell; Embryogenesis; Biology; Lipotoxicity; Cell biology; Lipid droplet; Embryo; Genetics; Biotechnology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.2047675209084722,"gpt":0.4110573913801832,"spread":0.206289870471711,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00207816,0.0003359071,0.001011043,0.0003867821,0.0000922288,0.00002299846,0.000616403,0.001020881,0.000041976],"category_scores_gemma":[0.001365338,0.0002156823,0.0002761193,0.0006572448,0.0002329236,0.000002686015,0.000775668,0.0003959911,0.0001114874],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006906103,"about_ca_system_score_gemma":0.0009315036,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003750586,"about_ca_topic_score_gemma":0.0001135272,"domain_scores_codex":[0.9963982,0.0009078122,0.0007339392,0.0008513889,0.0004272989,0.0006813797],"domain_scores_gemma":[0.9987301,0.000302014,0.0001755164,0.0004855401,0.0001710966,0.0001357243],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005969929,0.0001663546,0.00002780059,0.002315681,0.00009297773,0.000006966569,0.00001116232,1.452025e-7,0.004426911,0.00008576956,0.0009077544,0.9918988],"study_design_scores_gemma":[0.0001483232,0.0002035374,0.00009937897,0.0009657119,0.00001390211,0.000003323982,0.00001419288,8.413846e-7,0.00532622,0.00002253135,0.9929475,0.0002544958],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002811751,0.9957216,0.00001464498,0.00001729259,0.0002700484,0.000575764,0.00003160057,0.00002096021,0.0005363374],"genre_scores_gemma":[0.0008106235,0.9937891,0.0002183948,0.00001291221,0.0006655001,0.0003895899,0.0005825154,0.00004128374,0.003490108],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9920398,"threshold_uncertainty_score":0.8795269,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4223655607","doi":"10.1186/s40659-022-00378-2","title":"Tellurite and Selenite: how can these two oxyanions be chemically different yet so similar in the way they are transformed to their metal forms by bacteria?","year":2022,"lang":"en","type":"review","venue":"Biological Research","topic":"Selenium in Biological Systems","field":"Nursing","cited_by":20,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Universität Zürich; Università di Bologna; Università degli Studi di Palermo; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Selenium; Bacteria; Metal; Chemistry; Microbiology; Environmental chemistry; Biology; Genetics; Organic chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.2735462409400927,"gpt":0.4109720855746313,"spread":0.1374258446345387,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.005054631,0.0009755392,0.002498053,0.0003325956,0.0006314683,0.0004567941,0.002564248,0.0009861031,0.0004628878],"category_scores_gemma":[0.002968742,0.0004008494,0.0006678758,0.001133539,0.0006717275,0.00006601936,0.0007988177,0.003505092,0.00001966303],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006310426,"about_ca_system_score_gemma":0.00008271756,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002130041,"about_ca_topic_score_gemma":0.0003558785,"domain_scores_codex":[0.9881417,0.0063047,0.0009578543,0.001544072,0.001140875,0.001910777],"domain_scores_gemma":[0.9885563,0.009693604,0.0002283864,0.0009263442,0.0001049956,0.0004903792],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00090338,0.001539111,0.0003417662,0.003889474,0.0004138238,0.00005566978,0.00383547,2.021917e-7,0.0269358,0.0005555392,0.005988502,0.9555413],"study_design_scores_gemma":[0.0003884834,0.001125317,0.0003563626,0.0008337488,0.00005879473,0.00006057824,0.001377191,0.000003289538,0.0002337366,0.0004586735,0.9944803,0.0006235543],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.1618581,0.8176022,0.000003175173,0.009303189,0.0003424194,0.007509476,0.002779348,0.0001582707,0.0004438611],"genre_scores_gemma":[0.3058368,0.6900716,0.00002032247,0.0004136565,0.0002312918,0.002316582,0.0009673706,0.00006620134,0.00007618115],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9884918,"threshold_uncertainty_score":0.9998443,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2106835200","doi":"10.4067/s0716-97602005000200011","title":"Estrogen supplementation failed to attenuate biochemical indices of neutrophil infiltration or damage in rat skeletal muscles following ischemia","year":2005,"lang":"en","type":"article","venue":"Biological Research","topic":"Exercise and Physiological Responses","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Wilfrid Laurier University","funders":"Natural Sciences and Engineering Research Council of Canada; Türkiye Bilimsel ve Teknolojik Araştırma Kurumu","keywords":"Estrogen; Ischemia; Infiltration (HVAC); Skeletal muscle; Myeloperoxidase; Internal medicine; Endocrinology; Medicine; Inflammation","retraction":null,"screen_n_in":null,"score":{"opus":0.1340681110316758,"gpt":0.4468662138444095,"spread":0.3127981028127337,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001008107,0.0001419703,0.0003602457,0.0002318401,0.00006626048,0.00002075055,0.0001966435,0.0002091157,0.000575553],"category_scores_gemma":[0.002374423,0.00008558956,0.0001175268,0.0006891434,0.0001609331,0.00008830993,0.000160376,0.0003591203,0.00007447661],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008962257,"about_ca_system_score_gemma":0.0001273816,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000580229,"about_ca_topic_score_gemma":0.00002918799,"domain_scores_codex":[0.9979263,0.0003139264,0.0004181581,0.0003865077,0.0004843011,0.0004708304],"domain_scores_gemma":[0.9984748,0.0009393832,0.00004877661,0.0002044318,0.0001174914,0.0002150847],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003643819,0.0002434531,0.02413052,0.00002644359,0.00001503191,0.00003929062,0.0001212752,0.000005686054,0.9626069,0.0001418092,0.0007751292,0.008250656],"study_design_scores_gemma":[0.001651384,0.002539893,0.2335985,0.0001469723,0.00001291068,0.000002796692,0.000496427,0.0000807676,0.7568716,0.0001631987,0.004272739,0.0001628407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973227,0.000151249,0.00001049568,0.001516698,0.00001775613,0.0006620397,0.00001651697,0.00002391465,0.0002786214],"genre_scores_gemma":[0.9973454,0.0001938046,0.001669948,0.0001879252,0.0001579778,0.0001057899,0.0001714928,0.000008603899,0.0001590345],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.209468,"threshold_uncertainty_score":0.6301901,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4399777576","doi":"10.1186/s40659-024-00522-0","title":"Loss of protein tyrosine phosphatase receptor delta PTPRD increases the number of cortical neurons, impairs synaptic function and induces autistic-like behaviors in adult mice","year":2024,"lang":"en","type":"article","venue":"Biological Research","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Agencia Nacional de Investigación y Desarrollo","keywords":"Excitatory postsynaptic potential; Neuroscience; Biology; Neurotransmission; Protein tyrosine phosphatase; Cortex (anatomy); Inhibitory postsynaptic potential; Receptor; Cell biology; Signal transduction; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.03414072757536607,"gpt":0.3373349869802155,"spread":0.3031942594048495,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001068685,0.0001726894,0.0002279294,0.00006884885,0.00008309994,0.00003488736,0.0003089874,0.000243946,0.00009544483],"category_scores_gemma":[0.003106937,0.0001098772,0.00006382498,0.0004035335,0.000978343,0.00001010625,0.0004543059,0.0004211678,0.0000131396],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002469803,"about_ca_system_score_gemma":0.0001583962,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000941804,"about_ca_topic_score_gemma":0.00005568243,"domain_scores_codex":[0.9977927,0.0005830348,0.0003994977,0.0005084545,0.0003160116,0.0004002613],"domain_scores_gemma":[0.9989603,0.0003397195,0.00005967985,0.0003251083,0.0002081461,0.0001070555],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001847642,0.0005648774,0.03727722,0.000228715,0.00006841121,0.00004693687,0.00001884957,0.000001761606,0.9355428,0.0181386,0.00124464,0.005019557],"study_design_scores_gemma":[0.0008504919,0.003041079,0.1185962,0.0003616008,0.00004543508,0.00005261488,0.0001899543,0.0001156107,0.8736308,0.0009707012,0.00182466,0.0003208809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9821975,0.01622103,0.0000379506,0.0002728512,0.00005410029,0.0006716076,0.0005183856,0.0000146495,0.00001189688],"genre_scores_gemma":[0.9982377,0.0008697044,0.0002351593,0.00004081132,0.00005660749,0.0001899534,0.0003277825,0.00001630968,0.00002591939],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08131893,"threshold_uncertainty_score":0.4480664,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2019583868","doi":"10.4067/s0716-97602013000300004","title":"Septin 7: Actin cross-organization is required for axonal association of Schwann cells","year":2013,"lang":"en","type":"article","venue":"Biological Research","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Septin; Cell biology; Cytoskeleton; Biology; Microtubule; Myelin; Cytoplasm; Dorsal root ganglion; Microfilament; Actin; GTPase; Cytoplasmic streaming; Cytokinesis; Neurite; Cell polarity; Cell division; Actin cytoskeleton; Neuroscience; Anatomy; Cell; Genetics; Dorsum; Central nervous system","retraction":null,"screen_n_in":null,"score":{"opus":0.08444791618654855,"gpt":0.3910683388280762,"spread":0.3066204226415276,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007380962,0.00007351936,0.0001007103,0.00004501229,0.0001330452,0.00005328354,0.0001759142,0.0002794596,0.0009586784],"category_scores_gemma":[0.001767003,0.00005957373,0.00007929851,0.0001638718,0.0000514583,0.000006912171,0.0001388753,0.0001235885,0.00009772485],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004806813,"about_ca_system_score_gemma":0.00006452783,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003769211,"about_ca_topic_score_gemma":0.000003295618,"domain_scores_codex":[0.9989407,0.0001088456,0.0002026571,0.0002675707,0.0002003682,0.0002798763],"domain_scores_gemma":[0.9983939,0.0001226259,0.00008960341,0.0001751337,0.001153603,0.00006512972],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000335626,0.00007448807,0.002886267,0.000006476376,0.00002173567,8.635084e-8,0.000009058262,0.000001344823,0.9761149,0.0002892053,0.01987718,0.0006857158],"study_design_scores_gemma":[0.0002477777,0.0004633992,0.003536156,0.000004620774,0.000002049909,4.705576e-7,0.0000373199,0.0001655228,0.9238132,0.0004198289,0.07123557,0.00007413948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956198,0.00005873682,0.00211621,0.0005930478,0.0001210756,0.0004356667,0.00006344745,0.000007981398,0.0009839784],"genre_scores_gemma":[0.9918402,0.00009421583,0.0006457826,0.00008994481,0.0001843278,0.00005926636,0.0002431368,0.00001097949,0.006832083],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05230173,"threshold_uncertainty_score":0.9999546,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2114160713","doi":"10.4067/s0716-97602013000100007","title":"A simple and effective pressure culture system modified from a transwell cell culture system","year":2013,"lang":"en","type":"article","venue":"Biological Research","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Aging","funders":"State Key Laboratory of Ophthalmology; Guangdong Medical College; National Natural Science Foundation of China","keywords":"Cell culture; Cell biology; Tissue culture; In vitro; Biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.03126811409644669,"gpt":0.3059877049142055,"spread":0.2747195908177588,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003373125,0.0001919209,0.0002265941,0.00003704944,0.0002394914,0.0001119189,0.0002645864,0.0005141818,0.00006650097],"category_scores_gemma":[0.0001042259,0.000122747,0.0001134532,0.0001173942,0.0000923928,0.00000700137,0.0001984464,0.0004143466,0.00009202737],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003439751,"about_ca_system_score_gemma":0.00002529868,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004276144,"about_ca_topic_score_gemma":0.00001118727,"domain_scores_codex":[0.9980766,0.000478625,0.0001909158,0.0006176723,0.0002170108,0.0004191843],"domain_scores_gemma":[0.9990451,0.00006992132,0.00004426294,0.0003341039,0.0002965222,0.0002101284],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001006394,0.00007344466,0.0001214394,0.000102743,0.00006849643,0.000006426865,0.0001265996,0.000005698952,0.9922428,0.001020539,0.005554794,0.0005763383],"study_design_scores_gemma":[0.001905262,0.00335235,0.002314562,0.0001663427,0.00006488439,0.00004286999,0.00655083,0.007526287,0.6651627,0.0005613894,0.3116456,0.0007068731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9804667,0.00592291,0.002213452,0.0000608754,0.0001260105,0.001594008,0.0002279174,0.00005612587,0.009332029],"genre_scores_gemma":[0.9967607,0.0003043474,0.0001225024,0.00003050461,0.0002782975,0.0003593251,0.000291464,0.00001579286,0.001837123],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3270801,"threshold_uncertainty_score":0.5005476,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2123256096","doi":"10.4067/s0716-97602012000100003","title":"The normal chain length distribution of the O antigen is required for the interaction of Shigella flexneri 2a with polarized Caco-2 cells","year":2012,"lang":"en","type":"article","venue":"Biological Research","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Comisión Nacional de Investigación Científica y Tecnológica; Canadian Institutes of Health Research","keywords":"Shigella flexneri; Antigen; Internalization; Lipopolysaccharide; Biology; Microbiology; Microfold cell; Caco-2; Shigella; Mutant; Epithelium; Cell biology; Cell culture; Cell; Gene; Immunology; Escherichia coli; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.09498493274310593,"gpt":0.3841598634334014,"spread":0.2891749306902955,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002782581,0.0001095943,0.0001424092,0.00001490642,0.0005214891,0.00002153474,0.0005535672,0.0001368154,0.000009334482],"category_scores_gemma":[0.001599432,0.00004153063,0.0001200034,0.000241492,0.00102808,0.000006336109,0.0005112401,0.0002628762,0.000001946794],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003036944,"about_ca_system_score_gemma":0.0001060186,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001196627,"about_ca_topic_score_gemma":0.00003915162,"domain_scores_codex":[0.9980787,0.0005772276,0.0002135008,0.0001990752,0.0003812269,0.0005502567],"domain_scores_gemma":[0.9981275,0.0008102011,0.0001015497,0.0004364148,0.0004629779,0.00006140087],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001260107,0.00009698683,0.01033438,0.00001791051,0.000111865,9.155633e-8,0.00009360446,0.00000248317,0.9840599,0.0005051114,0.001546867,0.0019707],"study_design_scores_gemma":[0.0004890178,0.001170538,0.05671855,0.00001914956,0.00001034547,0.000001731799,0.0009356212,0.000171709,0.8370796,0.00005393324,0.103251,0.00009884757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944185,0.00191304,0.000735468,0.001531512,0.0001034157,0.0008820822,0.000110275,0.000003902731,0.0003017759],"genre_scores_gemma":[0.9971899,0.001929904,0.00006174105,0.00003385672,0.0001922262,0.0001199518,0.00002944859,0.000007848793,0.0004351354],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1469803,"threshold_uncertainty_score":0.4010926,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4225994666","doi":"10.1186/s40659-021-00362-2","title":"Mild poikilocapnic hypoxia increases very low frequency haemoglobin oxygenation oscillations in prefrontal cortex","year":2021,"lang":"en","type":"article","venue":"Biological Research","topic":"Heart Rate Variability and Autonomic Control","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Regina","funders":"Narodowe Centrum Nauki","keywords":"Hypoxia (environmental); Oxygenation; Medicine; Cardiology; Prefrontal cortex; Heart rate; Internal medicine; Electroencephalography; Cerebral blood flow; Anesthesia; Blood pressure; Oxygen; Cognition; Chemistry; Psychiatry","retraction":null,"screen_n_in":null,"score":{"opus":0.1239331212575586,"gpt":0.3776453261951056,"spread":0.253712204937547,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001607211,0.0001201461,0.0003157148,0.0001712226,0.0001375004,0.00003704484,0.0001138538,0.0002614032,0.001294718],"category_scores_gemma":[0.005082293,0.00009304672,0.00009807591,0.0006347857,0.0002362544,0.00007844633,0.0001345094,0.0005771655,0.0002575555],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004192219,"about_ca_system_score_gemma":0.001021818,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007776373,"about_ca_topic_score_gemma":0.0003603193,"domain_scores_codex":[0.9975433,0.0007135149,0.0003794794,0.0004986929,0.0003536049,0.0005114236],"domain_scores_gemma":[0.9980591,0.001029044,0.00002567823,0.0003446982,0.0003177208,0.000223775],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001541993,0.001133856,0.08195794,0.00004816345,0.00003484292,0.000260098,0.00008504872,0.000006873037,0.9037675,0.00312531,0.0003549193,0.009071256],"study_design_scores_gemma":[0.001103692,0.0003299166,0.988811,0.00008321354,0.000005372935,0.00002512546,0.0001487431,0.0008390844,0.002534177,0.002520757,0.003489432,0.0001094448],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9919029,0.0007372397,0.00003731166,0.003033406,0.00006398237,0.0005690631,0.00004029844,0.00004552414,0.003570233],"genre_scores_gemma":[0.997985,0.0002381848,0.0003927971,0.0002694223,0.0001526827,0.00007103165,0.0001610524,0.00000796047,0.0007218696],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9068531,"threshold_uncertainty_score":0.9996182,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4367318379","doi":"10.1186/s40659-023-00430-9","title":"Zebrafish ambra1b knockout reveals a novel role for Ambra1 in primordial germ cells survival, sex differentiation and reproduction","year":2023,"lang":"en","type":"article","venue":"Biological Research","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Prince Edward Island","funders":"School of Medicine, New York University; Westfälische Wilhelms-Universität Münster; Università degli Studi di Padova; Ministero della Salute; Associazione Italiana per la Ricerca sul Cancro; Fondazione Telethon; York University; CureSearch for Children's Cancer","keywords":"Biology; Zebrafish; Gene knockdown; Cell biology; Morpholino; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.101330763072101,"gpt":0.3909951732721554,"spread":0.2896644102000543,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003693519,0.0001584916,0.0002340952,0.0002553276,0.0002163914,0.00007762016,0.0003610621,0.0003807996,0.00002507159],"category_scores_gemma":[0.004977182,0.0001308312,0.00007793699,0.000802372,0.0004113239,0.000008699506,0.0005659515,0.0003354456,0.00004326161],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005335,"about_ca_system_score_gemma":0.0001249759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007490869,"about_ca_topic_score_gemma":0.00005943518,"domain_scores_codex":[0.9969794,0.0003349495,0.0003390503,0.001044075,0.0004805236,0.0008220479],"domain_scores_gemma":[0.9984422,0.0004577772,0.00005621661,0.0005243208,0.0002562075,0.0002633258],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001982119,0.0001775314,0.002824008,0.00003113426,0.00001750877,0.000001149449,0.00002208396,0.000002391373,0.9810881,0.0005241066,0.00536072,0.009753025],"study_design_scores_gemma":[0.002522388,0.001751761,0.4178594,0.00004100892,0.000007288469,0.000005371947,0.0004152994,0.001057433,0.4507667,0.006568192,0.1184812,0.0005239692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995218,0.0001946641,0.0009686397,0.001605846,0.00008703596,0.001373982,0.0001190256,0.00004969656,0.0003831298],"genre_scores_gemma":[0.9946429,0.0009452961,0.0003911545,0.00006352194,0.000564907,0.0008900554,0.000689685,0.00002470206,0.001787768],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5303214,"threshold_uncertainty_score":0.5958511,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4403816942","doi":"10.1186/s40659-024-00558-2","title":"Landscape transcriptomic analysis of bovine follicular cells during key phases of ovarian follicular development","year":2024,"lang":"en","type":"article","venue":"Biological Research","topic":"Reproductive Physiology in Livestock","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Follicular phase; Biology; Transcriptome; Ovarian follicle; Follicular fluid; Antral follicle; Downregulation and upregulation; Andrology; Cell biology; Internal medicine; Endocrinology; Gene expression; Gene; Oocyte; Genetics; Embryo; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.08799389382609231,"gpt":0.3297527036819766,"spread":0.2417588098558843,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001254059,0.0001722954,0.0005140181,0.0001678877,0.000145204,0.00002916897,0.0004933052,0.0001831367,0.001034201],"category_scores_gemma":[0.0002296064,0.00006205273,0.0003423463,0.002470079,0.0003597729,0.00006640285,0.0001661206,0.0002710893,0.0000254451],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003924743,"about_ca_system_score_gemma":0.00003592829,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001243649,"about_ca_topic_score_gemma":0.00002459925,"domain_scores_codex":[0.9974476,0.0004359432,0.0004655018,0.0007058687,0.000468976,0.0004760958],"domain_scores_gemma":[0.9987761,0.0006573984,0.00006212101,0.0001595365,0.0002301144,0.0001147426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001735257,0.0002105701,0.004854549,0.00003266997,0.0006155346,0.00001498277,0.0001279328,0.00003311333,0.9909344,0.0004566184,0.0001059148,0.002440131],"study_design_scores_gemma":[0.0001444948,0.001213871,0.5670598,0.00005088663,0.0001001236,0.000002211146,0.0001762959,0.0001431336,0.4260119,0.0006907852,0.00421132,0.0001952066],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99687,0.0019621,0.00001434618,0.0002704038,0.00007014513,0.0003295066,0.00007023592,0.00004984649,0.0003634337],"genre_scores_gemma":[0.998956,0.0002096407,0.0002929932,0.000007327127,0.0001219918,0.00004735435,0.0001030069,0.000001532703,0.0002601233],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5649226,"threshold_uncertainty_score":0.999879,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4400684853","doi":"10.1186/s40659-024-00523-z","title":"Unveiling a novel memory center in human brain: neurochemical identification of the nucleus incertus, a key pontine locus implicated in stress and neuropathology","year":2024,"lang":"en","type":"article","venue":"Biological Research","topic":"Pregnancy-related medical research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"National Institute on Aging; Arizona Biomedical Research Commission; Arizona State University; BrightFocus Foundation; National Institute of Neurological Disorders and Stroke; Alzheimer's Association; Arizona Department of Health Services; Michael J. Fox Foundation for Parkinson's Research","keywords":"Pons; Biology; Human brain; Neuroscience; Dorsal motor nucleus; Pathology; Neurodegeneration; Locus coeruleus; Anatomy; Nucleus; Medicine; Vagus nerve; Stimulation","retraction":null,"screen_n_in":null,"score":{"opus":0.101656194492552,"gpt":0.4122910158764386,"spread":0.3106348213838866,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002440497,0.0001430467,0.0003300888,0.0004244672,0.00006247353,0.00003252255,0.0004227459,0.0003380821,0.00006628635],"category_scores_gemma":[0.01011106,0.00008690797,0.00006866789,0.001403068,0.001053148,0.00004480675,0.0007732267,0.002126811,0.00001572255],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001385312,"about_ca_system_score_gemma":0.0001953519,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001275258,"about_ca_topic_score_gemma":0.00002765752,"domain_scores_codex":[0.996739,0.0006383901,0.0006109134,0.0006834761,0.0006499749,0.0006782098],"domain_scores_gemma":[0.9977876,0.001348018,0.00004186419,0.0004424963,0.0001663029,0.0002137344],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002532908,0.0004922468,0.01690483,0.0002404346,0.000009249371,0.0003235727,0.0001675541,0.000001190956,0.9735202,0.0006252825,0.0001548363,0.007307378],"study_design_scores_gemma":[0.004354015,0.001149466,0.8654172,0.005474653,0.00001344583,0.0002557988,0.000247546,0.00504676,0.1147221,0.001372486,0.001678474,0.000268088],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9891441,0.002133888,0.00002354631,0.007171982,0.00005499423,0.0008033479,0.00003126607,0.00004027125,0.0005966031],"genre_scores_gemma":[0.9987451,0.0006456944,0.00002102175,0.0001530393,0.00005254924,0.00007214802,0.000025554,0.00001977412,0.0002650627],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.858798,"threshold_uncertainty_score":0.9982272,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4396845062","doi":"10.1186/s40659-024-00509-x","title":"Combined transcriptomics and proteomics unveil the impact of vitamin C in modulating specific protein abundance in the mouse liver","year":2024,"lang":"en","type":"article","venue":"Biological Research","topic":"Vitamin C and Antioxidants Research","field":"Nursing","cited_by":2,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Transcriptome; Proteomics; Biology; Vitamin; Enzyme; Biochemistry; Lipid metabolism; Quantitative proteomics; Gene expression; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.1394959896851252,"gpt":0.3998907505717622,"spread":0.260394760886637,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004943805,0.0001463458,0.0002283456,0.0002386024,0.0001531382,0.00019616,0.0005552788,0.0001635737,0.00003460862],"category_scores_gemma":[0.0006437962,0.00006704812,0.00009246341,0.001127351,0.0007743263,0.000102545,0.000118185,0.001294379,0.00001270136],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001593057,"about_ca_system_score_gemma":0.0000670602,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007232078,"about_ca_topic_score_gemma":0.00006247228,"domain_scores_codex":[0.996736,0.001395609,0.0003373438,0.0003917261,0.0004964256,0.0006429087],"domain_scores_gemma":[0.9983912,0.00116081,0.00002464344,0.0002880305,0.00007919265,0.00005610937],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009290575,0.0003640214,0.01499075,0.000189105,0.00001369976,0.00007798086,0.002843296,0.0000446417,0.9519861,0.002649465,0.0002718542,0.02563999],"study_design_scores_gemma":[0.002397848,0.004915895,0.8307597,0.001101828,0.000003856203,0.00002807466,0.004089318,0.07082044,0.07449491,0.0100952,0.0007968235,0.0004961116],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952832,0.001139652,0.00004222161,0.001472418,0.00002179761,0.00177199,0.00002251259,0.00001894168,0.0002272017],"genre_scores_gemma":[0.9990332,0.0004595153,0.000169756,0.0000122319,0.00005622565,0.0001337997,0.000005235937,0.00001528242,0.0001147579],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8774912,"threshold_uncertainty_score":0.5623503,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4290027775","doi":"10.1186/s40659-022-00393-3","title":"An exploration of microbial response to stressors with Prof. Claudio C. Vásquez Guzmán","year":2022,"lang":"en","type":"editorial","venue":"Biological Research","topic":"Environmental and Cultural Studies in Latin America and Beyond","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Humanities; Environmental ethics; Philosophy","retraction":null,"screen_n_in":null,"score":{"opus":0.0812971482826578,"gpt":0.3744050556737837,"spread":0.2931079073911259,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001649083,0.0002664069,0.0003780764,0.00005266526,0.0005153319,0.00003612235,0.0008513326,0.0003393385,0.009359736],"category_scores_gemma":[0.0008031917,0.0001574854,0.00007536826,0.0005644517,0.001270282,0.0001923397,0.00131105,0.001008853,0.0002585882],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005006645,"about_ca_system_score_gemma":0.00003791148,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003045567,"about_ca_topic_score_gemma":0.0000732909,"domain_scores_codex":[0.9953459,0.001235039,0.0003198256,0.0008398266,0.001682078,0.0005773419],"domain_scores_gemma":[0.9984241,0.0007806883,0.000121967,0.0004205439,0.00003951851,0.0002132476],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003493432,0.0004173213,0.0009269454,0.00001329817,0.00002236064,0.00001926999,0.0004818868,0.0001901224,0.07561586,0.000007140723,0.9140201,0.004792256],"study_design_scores_gemma":[0.0002617247,0.007183445,0.002682465,0.00002432273,0.000006487825,6.336576e-7,0.001128408,0.000001801471,0.001259918,0.00007959441,0.9870898,0.0002814509],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8841212,0.0002524898,0.00006490406,0.002133161,0.09723569,0.003151149,0.00104244,0.0001163134,0.01188261],"genre_scores_gemma":[0.6581782,0.002621902,0.004497979,0.0003606085,0.2898763,0.00302809,0.00273046,0.000185955,0.03852057],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2259431,"threshold_uncertainty_score":0.9915459,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W7117357398","doi":"10.1186/s40659-025-00655-w","title":"Mitochondrial and lysosomal dysfunctions might be involved in the pathogenesis of the CACNA1A-related neurodevelopmental disorders according to in vitro studies","year":2025,"lang":"en","type":"article","venue":"Biological Research","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Natural Science Foundation of Hunan Province","keywords":"Mitochondrion; Mitochondrial DNA; mitochondrial fusion; Chinese hamster ovary cell; Mitochondrial disease; Mitophagy; DNAJA3; Adenosine triphosphate; Mutation; PINK1","retraction":null,"screen_n_in":null,"score":{"opus":0.06102038848386446,"gpt":0.3507413847359854,"spread":0.289720996252121,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003974699,0.00008796867,0.0001236174,0.0000953726,0.000148847,0.00001531069,0.0002907429,0.00008624364,0.000001986528],"category_scores_gemma":[0.001058547,0.00004602623,0.00005482213,0.0004699281,0.0002423896,0.000001734842,0.0005231801,0.0001415534,6.377603e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002091551,"about_ca_system_score_gemma":0.00008577167,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007788723,"about_ca_topic_score_gemma":0.0004212291,"domain_scores_codex":[0.9987589,0.0004014247,0.0001901774,0.0002894926,0.0001208007,0.000239222],"domain_scores_gemma":[0.9995259,0.0001814699,0.00001980804,0.0001844257,0.00005730557,0.00003107229],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003015949,0.0001130914,0.09887297,0.000009592322,0.00002322727,0.00000373291,0.0001416064,0.00001098813,0.8984281,0.0001195044,0.0002484451,0.001727177],"study_design_scores_gemma":[0.000790003,0.0002387097,0.9597515,0.00003671187,0.000006988221,0.000002198983,0.007291301,0.00001362498,0.02773421,0.0006391701,0.003363834,0.0001316758],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960088,0.001270671,0.000002858795,0.002023078,0.0001076849,0.0004272313,0.00002323592,0.000001936355,0.0001345232],"genre_scores_gemma":[0.9988863,0.0006095542,0.00005424122,0.0002340243,0.00002021317,0.00009726336,0.00001841438,0.000003536045,0.00007646732],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8706939,"threshold_uncertainty_score":0.1876895,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}