{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":400,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":400,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"788bee989a76","filters":{"venue":"Biomedical Optics Express"}},"results":[{"id":"W2606534623","doi":"10.1364/boe.8.003627","title":"ReLayNet: retinal layer and fluid segmentation of macular optical coherence tomography using fully convolutional networks","year":2017,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Retinal Imaging and Analysis","field":"Medicine","cited_by":607,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"Bayerisches Staatsministerium für Bildung und Kultus, Wissenschaft und Kunst; Nvidia","keywords":"Optical coherence tomography; Computer science; Artificial intelligence; Segmentation; Convolutional neural network; Deep learning; Pattern recognition (psychology); Benchmark (surveying); Computer vision; Ophthalmology; Medicine","authors":[{"name":"Abhijit Guha Roy","is_ca":true},{"name":"Sailesh Conjeti","is_ca":false},{"name":"Sri Phani Krishna Karri","is_ca":false},{"name":"Debdoot Sheet","is_ca":false},{"name":"Amin Katouzian","is_ca":false},{"name":"Christian Wachinger","is_ca":true},{"name":"Nassir Navab","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02657593600976555,"gpt":0.3095475841092514,"spread":0.2829716480994859,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006272795,0.001324588,0.0005410025,0.001061276,0.0002918983,0.0007479631,0.001712512,0.001221246,0.002266459],"category_scores_gemma":[0.00124365,0.0004611878,0.0007160447,0.0004725296,0.0003343647,0.00100663,0.0009817193,0.0006677483,0.0008890709],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001074705,"about_ca_system_score_gemma":0.001356444,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01094489,"about_ca_topic_score_gemma":0.01998509,"domain_scores_codex":[0.9997843,0.00003113202,0.00001189015,0.00007649777,0.00006131348,0.00003490609],"domain_scores_gemma":[0.9997614,0.0000733191,0.00003528534,0.00004321032,0.00006449824,0.00002234418],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0008356819,0.0003608376,0.004911275,0.0003443562,0.0004297346,0.0005378306,0.0001368979,0.2792461,0.04880129,0.006570969,0.0253654,0.6324597],"study_design_scores_gemma":[0.00002731752,0.0001131964,0.001064572,0.00002727004,0.00005258985,0.0001913077,0.00001708818,0.9723607,0.01990361,0.002459574,0.00376154,0.00002135316],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1534207,0.003676533,0.8066693,0.0008092099,0.0002401165,0.0003938103,0.003792103,0.02397112,0.007027199],"genre_scores_gemma":[0.5585318,0.001175708,0.416881,0.0006657136,0.00009847972,0.0002776227,0.007774735,0.0007306282,0.01386437],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01094489,"threshold_uncertainty_score":0.02176231,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2015810074","doi":"10.1364/boe.5.002037","title":"Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink","year":2014,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":171,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Polytechnique Montréal; Université de Sherbrooke; Institut National d'Optique","funders":"Canadian Institutes of Health Research; European Commission; Laserlab-Europe","keywords":"India ink; Optics; Diffuse optical imaging; Materials science; Inkwell; Biomedical engineering; Optical imaging; Physics; Medicine; Tomography; Composite material; Anatomy","authors":[{"name":"Lorenzo Spinelli","is_ca":false},{"name":"Marcin Botwicz","is_ca":false},{"name":"Michał Kacprzak","is_ca":false},{"name":"Daniel Milej","is_ca":false},{"name":"Piotr Sawosz","is_ca":false},{"name":"Adam Liebert","is_ca":false},{"name":"Udo M. Weigel","is_ca":false},{"name":"Turgut Durduran","is_ca":false},{"name":"Florian Foschum","is_ca":false},{"name":"Alwin Kienle","is_ca":false},{"name":"François Baribeau","is_ca":true},{"name":"S. Leclair","is_ca":true},{"name":"Julie Bouchard","is_ca":true},{"name":"Isabelle Noiseux","is_ca":true},{"name":"Peter Gallant","is_ca":true},{"name":"Ozzy Mermut","is_ca":true},{"name":"Andrea Farina","is_ca":false},{"name":"Antonio Pifferi","is_ca":false},{"name":"Alessandro Torricelli","is_ca":false},{"name":"Rinaldo Cubeddu","is_ca":false},{"name":"H.-C. Ho","is_ca":false},{"name":"Mikhail Mazurenka","is_ca":false},{"name":"Heidrun Wabnitz","is_ca":false},{"name":"Katy Klauenberg","is_ca":false},{"name":"Olha Bodnar","is_ca":false},{"name":"Clemens Elster","is_ca":false},{"name":"M. Bénazech-Lavoué","is_ca":true},{"name":"Yves Bérubé-Lauzière","is_ca":true},{"name":"Frédéric Lesage","is_ca":true},{"name":"Dmitry Khoptyar","is_ca":false},{"name":"Arman Ahamed Subash","is_ca":false},{"name":"Stefan Andersson‐Engels","is_ca":false},{"name":"Paola Di Ninni","is_ca":false},{"name":"Fabrizio Martelli","is_ca":false},{"name":"Giovanni Zaccanti","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02536355850078352,"gpt":0.3109555519461871,"spread":0.2855919934454035,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01033029,0.001540022,0.0009679949,0.003086511,0.001164949,0.001634297,0.00211427,0.001618025,0.001021201],"category_scores_gemma":[0.01165252,0.0005715693,0.0007553858,0.001883569,0.001681554,0.001056138,0.001499119,0.001064025,0.000743508],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001109808,"about_ca_system_score_gemma":0.001288325,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001032727,"about_ca_topic_score_gemma":0.001255228,"domain_scores_codex":[0.9891058,0.003588461,0.000706127,0.002524173,0.003634281,0.0004411526],"domain_scores_gemma":[0.990503,0.003092902,0.001494678,0.002164125,0.002543545,0.0002019626],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007786231,0.0003914023,0.009341125,0.000272978,0.0001166533,0.0001050798,0.0006084252,0.003862707,0.954817,0.002070504,0.0003519715,0.02728341],"study_design_scores_gemma":[0.00001931535,0.0009412682,0.003717374,0.00002740155,0.00008508391,0.0002882651,0.0001156544,0.005049244,0.9870558,0.0003451417,0.002313225,0.00004219127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.4270212,0.003692571,0.5622686,0.000168338,0.0001967917,0.0007631127,0.001089523,0.001825051,0.002974783],"genre_scores_gemma":[0.6631346,0.001180924,0.3303806,0.0002287593,0.00005064973,0.001107485,0.001472878,0.0003944746,0.002049657],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01033029,"threshold_uncertainty_score":0.05463243,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W963933316","doi":"10.1364/boe.6.002380","title":"Characterization of a Raman spectroscopy probe system for intraoperative brain tissue classification","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":154,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital; Polytechnique Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Raman spectroscopy; Brain tissue; Characterization (materials science); Materials science; Laser; In vivo; Raman scattering; Spectroscopy; Biomedical engineering; Optics; SIGNAL (programming language); Nuclear magnetic resonance; Pathology; Medicine; Computer science; Nanotechnology; Physics","authors":[{"name":"Joannie Desroches","is_ca":true},{"name":"Michael Jermyn","is_ca":true},{"name":"Kelvin Mok","is_ca":true},{"name":"Cédric Lemieux‐Leduc","is_ca":true},{"name":"Jeanne Mercier","is_ca":true},{"name":"Karl St‐Arnaud","is_ca":true},{"name":"Kirk Urmey","is_ca":false},{"name":"Marie‐Christine Guiot","is_ca":true},{"name":"Eric Marple","is_ca":false},{"name":"Kevin Petrecca","is_ca":true},{"name":"Frédéric Leblond","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02617858457338391,"gpt":0.3466391008596364,"spread":0.3204605162862525,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007946093,0.0004089509,0.0003130125,0.0003904283,0.0003014196,0.0004945504,0.0007794931,0.0006705668,0.00124044],"category_scores_gemma":[0.001438923,0.0002594445,0.0002161319,0.0002198584,0.0003541645,0.0005264924,0.0004034254,0.0003519999,0.0004612377],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004625804,"about_ca_system_score_gemma":0.0007471609,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005361775,"about_ca_topic_score_gemma":0.0007063107,"domain_scores_codex":[0.9994306,0.00009941478,0.00002388188,0.0001227747,0.0002697791,0.00005357162],"domain_scores_gemma":[0.999121,0.0003397845,0.0001055169,0.0001045788,0.0002595687,0.00006956852],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001444794,0.00003546476,0.001578786,0.00005856068,0.00001148242,0.00007073535,0.00007574291,0.001073974,0.976027,0.0002518814,0.0001566854,0.02051523],"study_design_scores_gemma":[0.00003089123,0.001744697,0.009179818,0.00001717018,0.00005104165,0.0008732173,0.00008355146,0.02741572,0.9564199,0.0001659798,0.003981964,0.00003591311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6522493,0.0007624268,0.34306,0.0004807002,0.0001014596,0.0004143695,0.000257989,0.001126663,0.001547177],"genre_scores_gemma":[0.8283763,0.0002807852,0.1683259,0.000196357,0.00003397633,0.0002477626,0.0002116981,0.00008407522,0.002243138],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00124044,"threshold_uncertainty_score":0.004202306,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2135898522","doi":"10.1364/boe.2.001432","title":"Vaporization of perfluorocarbon droplets using optical irradiation","year":2011,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":154,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Sunnybrook Health Science Centre; Health Sciences Centre; Toronto Metropolitan University","funders":"Ontario Ministry of Research and Innovation; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Terry Fox Foundation; Ontario Institute for Cancer Research; Canada Research Chairs; U.S. Department of Defense","keywords":"Vaporization; Materials science; Irradiation; Laser; Nanoparticle; Fluence; Absorption (acoustics); Optics; Nanotechnology; Chemistry; Composite material","authors":[{"name":"Eric M. Strohm","is_ca":true},{"name":"Ivan Gorelikov","is_ca":true},{"name":"Naomi Matsuura","is_ca":true},{"name":"Michael C. Kolios","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.026646853297505,"gpt":0.2174572042201309,"spread":0.1908103509226259,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001468554,0.0002910982,0.0001440294,0.0001492145,0.0001174337,0.0001905968,0.0001615595,0.0002195423,0.0009475581],"category_scores_gemma":[0.0002442046,0.0001577241,0.0001710696,0.0001044337,0.0002448128,0.0003154661,0.0002647336,0.0002229032,0.000170632],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003148318,"about_ca_system_score_gemma":0.0001530128,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004984385,"about_ca_topic_score_gemma":0.0006608404,"domain_scores_codex":[0.999887,0.00001163269,0.000006090548,0.00003188469,0.00004161571,0.00002181359],"domain_scores_gemma":[0.9998907,0.00004789358,0.00003139102,0.000007523419,0.00001362223,0.00000892745],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001020634,0.000003114507,0.00004436706,0.00001810302,0.000001071937,0.00001684803,0.00001014411,0.00005931943,0.9988219,0.0000338788,0.00001252928,0.0009684463],"study_design_scores_gemma":[0.00000361961,0.00006573877,0.0002441918,0.000001470538,0.000002424922,0.00003971834,0.000006288515,0.0004521162,0.9985383,0.00001394241,0.000630371,0.000001973569],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9712468,0.002167231,0.02304417,0.0001174025,0.00005318025,0.00009839801,0.0001091132,0.0001686619,0.002995091],"genre_scores_gemma":[0.9792971,0.001309626,0.01673352,0.0000719954,0.00001904514,0.0000531576,0.0001067389,0.00004107889,0.002367769],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009475581,"threshold_uncertainty_score":0.003169894,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1981653698","doi":"10.1364/boe.4.000559","title":"Intense THz pulses cause H2AX phosphorylation and activate DNA damage response in human skin tissue","year":2013,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Terahertz technology and applications","field":"Engineering","cited_by":150,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Lethbridge; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Alberta Innovates - Health Solutions; Alberta Cancer Foundation","keywords":"Terahertz radiation; DNA damage; Human skin; DNA Damage Repair; Picosecond; Pulse (music); Ionizing radiation; Optoelectronics; Materials science; Optics; Irradiation; DNA; Laser; Biology; Physics; Genetics","authors":[{"name":"Lyubov V. Titova","is_ca":true},{"name":"Ayesheshim K. Ayesheshim","is_ca":true},{"name":"Andrey Golubov","is_ca":true},{"name":"Dawson Fogen","is_ca":true},{"name":"Rocio Rodriguez‐Juarez","is_ca":true},{"name":"Frank A. Hegmann","is_ca":true},{"name":"Olga Kovalchuk","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009240360829776707,"gpt":0.2460258880573961,"spread":0.2367855272276194,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007529752,0.0001701378,0.0001005745,0.0001202442,0.0001027333,0.0001048393,0.00006688725,0.000224309,0.002008308],"category_scores_gemma":[0.0001148578,0.0001061121,0.0001334962,0.0001205682,0.000153894,0.0001191071,0.0001334002,0.0002711138,0.0002662696],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008423957,"about_ca_system_score_gemma":0.00006925927,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002044032,"about_ca_topic_score_gemma":0.0002543028,"domain_scores_codex":[0.9999522,0.000008472633,0.000003300894,0.00001353767,0.00001200839,0.00001045078],"domain_scores_gemma":[0.9999285,0.00002758063,0.00001446914,0.00001192237,0.00000662686,0.00001086084],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009306893,0.00001142055,0.0001833707,0.00001990294,0.00000386346,0.00005375137,0.00002061681,0.00002100494,0.9989812,0.00001572579,0.00002439234,0.000571617],"study_design_scores_gemma":[0.000009187578,0.0003027931,0.008098301,0.000003491667,0.000008598234,0.0003760631,0.00005449,0.0001628882,0.9903009,0.00003912375,0.0006414138,0.000002702955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959528,0.00140464,0.00151,0.00005163841,0.00002027205,0.00001928843,0.0001318412,0.00002016477,0.0008892822],"genre_scores_gemma":[0.9962633,0.0006591529,0.001121855,0.00006348005,0.000009179787,0.00002479616,0.0001869555,0.000006409912,0.001664942],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002008308,"threshold_uncertainty_score":0.006718516,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2596309565","doi":"10.1364/boe.8.002210","title":"Enhancement of accuracy in shape sensing of surgical needles using optical frequency domain reflectometry in optical fibers","year":2017,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Advanced Fiber Optic Sensors","field":"Engineering","cited_by":136,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Polytechnique Montréal","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Reflectometry; Optics; Materials science; Optical fiber; Tracking (education); Optical time-domain reflectometer; Fiber optic sensor; Distributed acoustic sensing; Fiber Bragg grating; Scattering; Accuracy and precision; Optoelectronics; Computer science; Time domain; Polarization-maintaining optical fiber; Physics; Computer vision","authors":[{"name":"François Parent","is_ca":true},{"name":"Sébastien Loranger","is_ca":true},{"name":"Koushik Kanti Mandal","is_ca":true},{"name":"Victor Lambin Iezzi","is_ca":true},{"name":"Jérôme Lapointe","is_ca":true},{"name":"Jean-Sébastien Boisvert","is_ca":true},{"name":"Mohamed Diaa Baiad","is_ca":true},{"name":"Samuel Kadoury","is_ca":true},{"name":"Raman Kashyap","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02751029143832173,"gpt":0.3103864642542475,"spread":0.2828761728159258,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008130028,0.0004692857,0.0002655851,0.0002445532,0.0001416795,0.0003949635,0.0005995755,0.0005878214,0.0002750779],"category_scores_gemma":[0.001756411,0.0001929284,0.0002152431,0.0002039027,0.0004237741,0.0005724208,0.0004258006,0.0003392285,0.0001750525],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003030046,"about_ca_system_score_gemma":0.0002379513,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00043566,"about_ca_topic_score_gemma":0.0006366704,"domain_scores_codex":[0.9991965,0.0000935523,0.00004309753,0.0002117311,0.0003973071,0.00005780191],"domain_scores_gemma":[0.9983447,0.00054776,0.0005613699,0.0002520223,0.000258068,0.00003615937],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007738852,0.00002394474,0.0006356398,0.00005212852,0.000005149367,0.00005948156,0.00006568449,0.001478381,0.9794441,0.0001989583,0.00004425309,0.01791475],"study_design_scores_gemma":[0.000008121528,0.0002038053,0.001519065,0.000006549049,0.000008022317,0.0001830875,0.00001723622,0.009193158,0.9882676,0.00008572896,0.0004914717,0.00001613979],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8350224,0.001298167,0.1612005,0.0002590591,0.00009500252,0.0000569835,0.00006315677,0.0004118159,0.001593007],"genre_scores_gemma":[0.9101919,0.0004501236,0.08855233,0.00007718246,0.00003022284,0.00001846682,0.00002823571,0.00002837116,0.0006231288],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008130028,"threshold_uncertainty_score":0.004299641,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2581493794","doi":"10.1364/boe.8.001203","title":"Deep feature learning for automatic tissue classification of coronary artery using optical coherence tomography","year":2017,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Kawasaki Disease and Coronary Complications","field":"Medicine","cited_by":132,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Polytechnique Montréal; Centre Hospitalier Universitaire Sainte-Justine; École de Technologie Supérieure","funders":"Fonds de recherche du Québec – Nature et technologies","keywords":"Optical coherence tomography; Convolutional neural network; Artificial intelligence; Kawasaki disease; Random forest; Artery; Support vector machine; Feature extraction; Medicine; Computer science; Pattern recognition (psychology); Feature (linguistics); Radiology; Internal medicine","authors":[{"name":"Atefeh Abdolmanafi","is_ca":true},{"name":"Luc Duong","is_ca":true},{"name":"Nagib Dahdah","is_ca":true},{"name":"Farida Chériet","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04206254618045371,"gpt":0.3293638129411396,"spread":0.2873012667606859,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005740903,0.0003461463,0.0001956323,0.0007885999,0.0001229086,0.0002963561,0.0004088127,0.0004999735,0.00108669],"category_scores_gemma":[0.0009235615,0.0001690121,0.0003010107,0.0003990881,0.0001300874,0.0004951979,0.0003295754,0.0003103772,0.0004577824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000349193,"about_ca_system_score_gemma":0.0003797319,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001739189,"about_ca_topic_score_gemma":0.004263972,"domain_scores_codex":[0.9998519,0.00003633088,0.00000932789,0.00003198084,0.00004675684,0.00002366845],"domain_scores_gemma":[0.9997554,0.00008161803,0.0000518153,0.00003235408,0.00006689092,0.00001186257],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0002622053,0.0001693123,0.01345687,0.0002149816,0.0001176397,0.0001678951,0.00006707408,0.02519269,0.1636684,0.002846709,0.008147016,0.7856893],"study_design_scores_gemma":[0.00002250439,0.0001646195,0.01395098,0.00003548008,0.00005484236,0.0004245734,0.00002981119,0.895744,0.08170478,0.002305349,0.005533326,0.00002989085],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1350358,0.001600057,0.8578171,0.0005097258,0.00007309661,0.00009423235,0.0008054269,0.002155127,0.001909449],"genre_scores_gemma":[0.65995,0.0005990085,0.3350284,0.0002831043,0.00004862342,0.0001269413,0.0009474555,0.0000789843,0.002937508],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.001739189,"threshold_uncertainty_score":0.003635287,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2036087924","doi":"10.1364/boe.2.002068","title":"Calibration of diffuse correlation spectroscopy with a time-resolved near-infrared technique to yield absolute cerebral blood flow measurements","year":2011,"lang":"en","type":"erratum","venue":"Biomedical Optics Express","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":126,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Lawson Health Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Near-infrared spectroscopy; Cerebral blood flow; Indocyanine green; Blood flow; Photon diffusion; Diffuse optical imaging; Materials science; Calibration; Correlation coefficient; Neurointensive care; Biomedical engineering; Nuclear magnetic resonance; Perfusion; Spectroscopy; Medicine; Nuclear medicine; Optics; Pathology; Anesthesia; Physics; Cardiology; Radiology; Computer science; Tomography; Nanotechnology","authors":[{"name":"Mamadou Diop","is_ca":true},{"name":"Kyle Verdecchia","is_ca":true},{"name":"Ting‐Yim Lee","is_ca":true},{"name":"Keith St. Lawrence","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02206312903437706,"gpt":0.2670180109148827,"spread":0.2449548818805056,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002311331,0.001015096,0.0004873326,0.0009408327,0.0002762862,0.0005417448,0.0009121395,0.0009841125,0.003573067],"category_scores_gemma":[0.00632125,0.0004524663,0.0003705674,0.001410142,0.000535392,0.000830703,0.0004728673,0.001108097,0.001985464],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004750641,"about_ca_system_score_gemma":0.0005319471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009901592,"about_ca_topic_score_gemma":0.0026114,"domain_scores_codex":[0.998591,0.0003220679,0.00007260103,0.0003788713,0.0005909386,0.00004454302],"domain_scores_gemma":[0.998651,0.0005066718,0.0001417029,0.0002382099,0.0004370628,0.00002551228],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002633618,0.0001262965,0.003802662,0.0005454542,0.00005317829,0.0002931479,0.0001889063,0.001373773,0.836613,0.002412833,0.005022653,0.1493048],"study_design_scores_gemma":[0.00007780109,0.001202908,0.01842518,0.0001381322,0.0001578383,0.002120727,0.0001883012,0.03528536,0.8813651,0.001350987,0.05957296,0.0001148226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"other","genre_scores_codex":[0.1663754,0.008508175,0.8026359,0.001127116,0.004688628,0.0003379032,0.0007305347,0.002453006,0.01314331],"genre_scores_gemma":[0.3059883,0.007915142,0.6629146,0.0006515765,0.0001667379,0.0004357283,0.0008675649,0.0005112087,0.02054916],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.003573067,"threshold_uncertainty_score":0.01222366,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1972079471","doi":"10.1364/boe.3.002500","title":"Silica-coated super paramagnetic iron oxide nanoparticles (SPION) as biocompatible contrast agent in biomedical photoacoustics","year":2012,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Photoacoustic and Ultrasonic Imaging","field":"Engineering","cited_by":118,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Natural Resources Canada; University of Waterloo; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Nanoparticle; Materials science; Photoacoustic imaging in biomedicine; Photoacoustic spectroscopy; Iron oxide nanoparticles; Biocompatible material; Contrast (vision); Ex vivo; In vivo; Nanotechnology; Biomedical engineering; Optics; Medicine","authors":[{"name":"Rudolf Alwi","is_ca":true},{"name":"Sergey A. Telenkov","is_ca":true},{"name":"Andreas Mandelis","is_ca":true},{"name":"Timothy Michael Carter Leshuk","is_ca":true},{"name":"Frank Gu","is_ca":true},{"name":"Sulayman A. Oladepo","is_ca":true},{"name":"Kirk H. Michaelian","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01061504284154659,"gpt":0.2324476002134215,"spread":0.221832557371875,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004703781,0.0003958934,0.0001580528,0.0001716971,0.0001064654,0.0002173659,0.0001817595,0.0003197418,0.0003192468],"category_scores_gemma":[0.000375849,0.0001682504,0.0001414812,0.00009703524,0.0003894609,0.0003932793,0.0002597849,0.0002402602,0.0001686383],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001343525,"about_ca_system_score_gemma":0.0001276414,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002050769,"about_ca_topic_score_gemma":0.00041229,"domain_scores_codex":[0.9998745,0.00003851228,0.000007696898,0.00002941552,0.00003587176,0.00001401655],"domain_scores_gemma":[0.9997955,0.00009870972,0.00003521104,0.00001431241,0.00003724234,0.00001920575],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003119072,0.000008498556,0.0001050921,0.00004483542,0.000002906379,0.00004384633,0.00001810327,0.0001452194,0.9973078,0.0001265164,0.00001745784,0.002148693],"study_design_scores_gemma":[0.000003705049,0.0001781069,0.0004266953,0.000004100517,0.00001419832,0.0001464902,0.000008851046,0.001306137,0.9965962,0.0000451268,0.001266468,0.000004015879],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9323113,0.008740534,0.05536555,0.0002269284,0.00006383692,0.00006361448,0.00002870837,0.000130654,0.003068899],"genre_scores_gemma":[0.9589701,0.002807855,0.03569999,0.0001082842,0.00003239199,0.00003032702,0.00005119591,0.00002451436,0.00227538],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0004703781,"threshold_uncertainty_score":0.002487659,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2519748907","doi":"10.1364/boe.7.004054","title":"Changes of collagen ultrastructure in breast cancer tissue determined by second-harmonic generation double Stokes-Mueller polarimetric microscopy","year":2016,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; California HIV/AIDS Research Program","keywords":"Ultrastructure; Microscopy; Polarization (electrochemistry); Second-harmonic generation; Materials science; Polarized light microscopy; Polarization Microscopy; Estrogen receptor; Chemistry; Optics; Biophysics; Pathology; Breast cancer; Biology; Medicine; Internal medicine; Cancer; Physics; Laser","authors":[{"name":"Ahmad Golaraei","is_ca":true},{"name":"Lukas Kontenis","is_ca":true},{"name":"Richard Cisek","is_ca":true},{"name":"Danielle Tokarz","is_ca":true},{"name":"Susan J. Done","is_ca":true},{"name":"Brian C. Wilson","is_ca":true},{"name":"Virginijus Barzda","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01268602475894515,"gpt":0.3158105013110214,"spread":0.3031244765520762,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001247331,0.0001582384,0.00006714614,0.0004032641,0.0001225834,0.0001196646,0.00006383784,0.0001689082,0.0004485706],"category_scores_gemma":[0.0001248074,0.0001386318,0.00005890663,0.0002335557,0.0001690798,0.00014244,0.0001075886,0.0001386585,0.00008855666],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001111035,"about_ca_system_score_gemma":0.00006926251,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004393794,"about_ca_topic_score_gemma":0.0006314002,"domain_scores_codex":[0.9999269,0.00001729432,0.000003364444,0.00001433637,0.00002587275,0.00001220667],"domain_scores_gemma":[0.9999003,0.0000312215,0.00002336151,0.000009106708,0.00002200275,0.0000138507],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003816664,0.000004387579,0.001060748,0.00001086251,0.000001700913,0.00001910868,0.00002562993,0.0000436591,0.998007,0.00002786662,0.000005984312,0.0007548878],"study_design_scores_gemma":[0.00000757428,0.0001880062,0.05851286,0.000003746238,0.00001430534,0.0006739654,0.0001253873,0.003564437,0.9362758,0.00009398872,0.0005307494,0.000009091529],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953844,0.0002806926,0.003676326,0.00002047043,0.000003877786,0.000008631424,0.00007005914,0.0000279723,0.0005274714],"genre_scores_gemma":[0.9942509,0.0003151717,0.004704119,0.00001310434,0.000003937704,0.00001893526,0.00009605888,0.000004877486,0.0005929027],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0004485706,"threshold_uncertainty_score":0.001500666,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2145558866","doi":"10.1364/boe.5.000547","title":"Wavefront sensorless adaptive optics optical coherence tomography for in vivo retinal imaging in mice","year":2014,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":101,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"National Eye Institute; Foundation Fighting Blindness; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC; Research to Prevent Blindness","keywords":"Optical coherence tomography; Adaptive optics; Wavefront; Optics; Retinal; Deformable mirror; Image quality; Computer science; Preclinical imaging; Optical tomography; Wavefront sensor; Image processing; Computer vision; Artificial intelligence; Physics; In vivo; Image (mathematics); Ophthalmology; Medicine; Biology","authors":[{"name":"Yifan Jian","is_ca":true},{"name":"Jing Xu","is_ca":true},{"name":"Martin A. Gradowski","is_ca":true},{"name":"Stefano Bonora","is_ca":false},{"name":"Robert J. Zawadzki","is_ca":false},{"name":"Marinko V. Šarunic","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01178005327793567,"gpt":0.2379645384859982,"spread":0.2261844852080626,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004722983,0.0005764824,0.0002434219,0.0005506218,0.0002429158,0.0004195447,0.0004966742,0.0004493992,0.00104067],"category_scores_gemma":[0.0002815792,0.0003365432,0.0002804261,0.0003259413,0.000291359,0.0004683459,0.0002435294,0.0007958304,0.0002908741],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003379432,"about_ca_system_score_gemma":0.0003651402,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008741661,"about_ca_topic_score_gemma":0.002585077,"domain_scores_codex":[0.9998236,0.00002792216,0.00001461514,0.00003820845,0.00007635057,0.00001926548],"domain_scores_gemma":[0.9997351,0.00004382162,0.00009456908,0.00004940077,0.00003316516,0.00004390625],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007335529,0.00002777721,0.0001150441,0.00002914515,0.000005415649,0.00003097622,0.00001162014,0.0003544249,0.9962639,0.0004714678,0.000113053,0.00250374],"study_design_scores_gemma":[0.00002673689,0.0002101043,0.0009176136,0.000007957226,0.00001445182,0.0001906955,0.000006071404,0.007076809,0.9886592,0.0001515937,0.002729986,0.000008747617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5831543,0.002091917,0.4046624,0.0009817143,0.0001863844,0.0004376064,0.001892198,0.001934899,0.004658553],"genre_scores_gemma":[0.6067041,0.00205376,0.3842287,0.0002545713,0.0000402262,0.0005077608,0.0008650335,0.000277224,0.005068561],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00104067,"threshold_uncertainty_score":0.003481388,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2566062678","doi":"10.1364/boe.8.000500","title":"Optimized sensitivity of Silicon-on-Insulator (SOI) strip waveguide resonator sensor","year":2017,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Photonic and Optical Devices","field":"Engineering","cited_by":100,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; CMC Microsystems","keywords":"Silicon on insulator; Resonator; Materials science; Wafer; Optoelectronics; Waveguide; Fabrication; Silicon photonics; Sensitivity (control systems); Silicon; Photonics; CMOS; Optics; Electronic engineering; Physics; Engineering","authors":[{"name":"Sahba TalebiFard","is_ca":true},{"name":"Shon Schmidt","is_ca":false},{"name":"Wei Shi","is_ca":true},{"name":"Wenxuan Wu","is_ca":false},{"name":"Nicolas A. F. Jaeger","is_ca":true},{"name":"Ezra Kwok","is_ca":true},{"name":"Daniel M. Ratner","is_ca":false},{"name":"Lukas Chrostowski","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01675642645787254,"gpt":0.2547494949130352,"spread":0.2379930684551626,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007244114,0.0007099372,0.0007430493,0.000330035,0.000196663,0.0006950189,0.0006582515,0.001069351,0.0005586735],"category_scores_gemma":[0.0008579191,0.0005367246,0.000414247,0.0002923632,0.0002566736,0.0005270171,0.0003114913,0.0003385999,0.0005467763],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006813328,"about_ca_system_score_gemma":0.000382515,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008869037,"about_ca_topic_score_gemma":0.002039015,"domain_scores_codex":[0.9989623,0.0001526331,0.00006344632,0.0003413023,0.0003606297,0.0001196765],"domain_scores_gemma":[0.9993919,0.0002013069,0.000113764,0.000047848,0.0002153548,0.00002980037],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006135538,0.00001393647,0.0003851754,0.00004015638,0.00001189837,0.00003187994,0.00002060321,0.0006398663,0.9973885,0.00006137235,0.00007280477,0.001272414],"study_design_scores_gemma":[0.00000816456,0.0001364858,0.001518453,0.00000440248,0.00001989649,0.00006697681,0.00002254914,0.007680308,0.9899233,0.00002347753,0.0005771,0.00001879502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9676546,0.001428856,0.02650278,0.000209718,0.00007665165,0.00009243582,0.0005916369,0.0004361028,0.003007111],"genre_scores_gemma":[0.9541782,0.000535515,0.04361298,0.0001043175,0.00001499392,0.00006752315,0.0002889425,0.00006298749,0.001134567],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001069351,"threshold_uncertainty_score":0.004943371,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2902556556","doi":"10.1364/boe.9.006569","title":"250 kHz, 15 µm resolution SD-OCT for in-vivo cellular imaging of the human cornea","year":2018,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Corneal surgery and disorders","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Cornea; Optical coherence tomography; Preclinical imaging; Corneal epithelium; Biomedical engineering; In vivo; Optics; Materials science; Medicine; Biology; Physics","authors":[{"name":"Bingyao Tan","is_ca":true},{"name":"Zohreh Hosseinaee","is_ca":true},{"name":"Le Han","is_ca":true},{"name":"Olivera Kralj","is_ca":true},{"name":"Luigina Sorbara","is_ca":true},{"name":"Kostadinka Bizheva","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02266917017303694,"gpt":0.2817253242480847,"spread":0.2590561540750477,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004958421,0.0001699669,0.0001771896,0.000526085,0.0001696134,0.0003302151,0.0002518561,0.000288269,0.004554347],"category_scores_gemma":[0.0004982554,0.0001762013,0.0001141956,0.0003779386,0.0001446243,0.0003748964,0.0002420465,0.0004138075,0.000782313],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002690853,"about_ca_system_score_gemma":0.0004293982,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003813533,"about_ca_topic_score_gemma":0.001666092,"domain_scores_codex":[0.9997924,0.00004021122,0.0000166318,0.00002643164,0.000107103,0.00001711748],"domain_scores_gemma":[0.9997602,0.0001065397,0.00002067384,0.00003501264,0.00005335695,0.00002419659],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009968707,0.00005724312,0.000799515,0.0001465526,0.00001587291,0.00007918762,0.00003725258,0.0005844597,0.9476796,0.001228485,0.0016508,0.04762138],"study_design_scores_gemma":[0.000116554,0.001149433,0.02731369,0.0001099756,0.0000885714,0.004275701,0.0001341138,0.07347101,0.8422128,0.002641874,0.04840219,0.00008410696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3158571,0.005054967,0.6471164,0.000829929,0.0004349062,0.000646432,0.002518433,0.002013977,0.02552777],"genre_scores_gemma":[0.5708454,0.001988848,0.4163757,0.0004078072,0.0000606469,0.0003890207,0.001143825,0.0001343558,0.008654489],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.004554347,"threshold_uncertainty_score":0.01523584,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2551561041","doi":"10.1364/boe.7.005129","title":"Raman spectroscopy detects distant invasive brain cancer cells centimeters beyond MRI capability in humans","year":2016,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Centre Hospitalier de l’Université de Montréal; Polytechnique Montréal; Montreal Neurological Institute and Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research","keywords":"Magnetic resonance imaging; Centimeter; Medicine; Cancer cell; Cancer surgery; Cancer; Optical imaging; Cancer imaging; Cancer detection; Brain cancer; Pathology; Radiology; Surgery; Optics; Internal medicine","authors":[{"name":"Michael Jermyn","is_ca":true},{"name":"Joannie Desroches","is_ca":true},{"name":"Jeanne Mercier","is_ca":true},{"name":"Karl St‐Arnaud","is_ca":true},{"name":"Marie‐Christine Guiot","is_ca":true},{"name":"Frédéric Leblond","is_ca":true},{"name":"Kevin Petrecca","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009218437018257778,"gpt":0.300773223779153,"spread":0.2915547867608952,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002818849,0.0003798684,0.0001770947,0.0002645499,0.0002663354,0.0004657349,0.000314836,0.000752565,0.0013706],"category_scores_gemma":[0.0004852835,0.0002143087,0.0001703592,0.0001168243,0.0006465181,0.0005030152,0.0004503639,0.0007268518,0.0007355907],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001490649,"about_ca_system_score_gemma":0.0003491737,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007052638,"about_ca_topic_score_gemma":0.001441447,"domain_scores_codex":[0.9998216,0.00002994905,0.000006350716,0.00006210714,0.00006173612,0.00001832123],"domain_scores_gemma":[0.9997692,0.00008269316,0.00006261295,0.00002488337,0.0000388842,0.00002185458],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005279624,0.00002966095,0.0009783657,0.00004252427,0.000006665066,0.0001150806,0.00008498575,0.0002805697,0.9896616,0.001065658,0.0002367341,0.007445324],"study_design_scores_gemma":[0.00001669098,0.0006025614,0.005040789,0.00002964248,0.00003843184,0.001338345,0.0002913227,0.005341054,0.9786533,0.002128973,0.006477639,0.00004133482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8308193,0.006167938,0.1463676,0.001825027,0.00031486,0.0000684092,0.0002630985,0.0007485442,0.01342524],"genre_scores_gemma":[0.9455954,0.002651263,0.04337957,0.0006285728,0.00007677246,0.00005902662,0.0001059716,0.00006382001,0.007439584],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0013706,"threshold_uncertainty_score":0.004585147,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2011909192","doi":"10.1364/boe.3.000972","title":"Feasibility of optical coherence elastography measurements of shear wave propagation in homogeneous tissue equivalent phantoms","year":2012,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Ultrasound Imaging and Elastography","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto Metropolitan University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Acoustic radiation force; Optical coherence tomography; Elastography; Materials science; Optics; Shear modulus; Transducer; Shear waves; Shear (geology); Imaging phantom; Wave propagation; Acoustics; Physics; Ultrasound; Composite material","authors":[{"name":"Marjan Razani","is_ca":true},{"name":"Adrian Mariampillai","is_ca":true},{"name":"Cuiru Sun","is_ca":true},{"name":"Timothy W. H. Luk","is_ca":true},{"name":"Victor X. D. Yang","is_ca":true},{"name":"Michael C. Kolios","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05800332022991508,"gpt":0.3152618426794577,"spread":0.2572585224495426,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00104357,0.0005447896,0.0002348047,0.0005027381,0.0001681478,0.0004118355,0.0002650119,0.0003024715,0.0006357551],"category_scores_gemma":[0.002495518,0.0002589061,0.0001170024,0.0002173056,0.0004855579,0.0006215916,0.0003929291,0.0002604389,0.0001118221],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001550555,"about_ca_system_score_gemma":0.0002759976,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006533067,"about_ca_topic_score_gemma":0.0008748802,"domain_scores_codex":[0.9996632,0.0001156154,0.00002429607,0.00007412878,0.00009067562,0.0000320814],"domain_scores_gemma":[0.9989243,0.0006708663,0.0001491713,0.00009553624,0.0001170106,0.00004300832],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008485285,0.00001706981,0.0004270921,0.00003014068,0.000004913963,0.00004064472,0.00003456526,0.0003165778,0.9965004,0.000134718,0.0000182806,0.002390875],"study_design_scores_gemma":[0.0000236024,0.0002993982,0.00390898,0.000008577736,0.00002575043,0.0002788562,0.00005411069,0.008983871,0.9852772,0.0001730017,0.0009538524,0.00001277615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7886274,0.001565866,0.2072163,0.000218072,0.00005959608,0.0002266111,0.0002522717,0.0003389861,0.001494779],"genre_scores_gemma":[0.9035124,0.0007610103,0.09447143,0.00008864627,0.00001957145,0.000210155,0.0001923433,0.00005295699,0.0006914457],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00104357,"threshold_uncertainty_score":0.005519032,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2122183652","doi":"10.1364/boe.5.001886","title":"Double nanohole optical tweezers visualize protein p53 suppressing unzipping of single DNA-hairpins","year":2014,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Optical tweezers; DNA; Biophysics; Nanotechnology; Materials science; Molecule; Molecular biophysics; Chemical physics; Chemistry; Optoelectronics; Biology; Physics; Optics; Biochemistry","authors":[{"name":"Abhay Kotnala","is_ca":true},{"name":"Reuven Gordon","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0146215513872398,"gpt":0.2842514253343276,"spread":0.2696298739470878,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001316594,0.0002696848,0.0001800102,0.0002467772,0.0001461438,0.0001974957,0.0003579681,0.0003702411,0.0006552159],"category_scores_gemma":[0.0002327175,0.0001501515,0.0001207115,0.00008871319,0.000355573,0.0004178544,0.0003140464,0.0004024321,0.0002273848],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002024129,"about_ca_system_score_gemma":0.00009657295,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002727393,"about_ca_topic_score_gemma":0.0004244878,"domain_scores_codex":[0.9998876,0.00001132752,0.000004540406,0.00003868583,0.00003602555,0.00002188939],"domain_scores_gemma":[0.9997776,0.00009391144,0.00005776244,0.00002019058,0.00002279586,0.00002769797],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001187583,0.000003661374,0.0000417707,0.000007445846,7.673711e-7,0.00002004964,0.000009545623,0.00004443928,0.9991835,0.00008786124,0.00001054831,0.0005786098],"study_design_scores_gemma":[0.000003837995,0.00003950707,0.0003990402,8.049725e-7,0.00000139054,0.00006533947,0.000009908695,0.001447273,0.9974805,0.000069831,0.0004798911,0.000002747559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9638392,0.000611367,0.03395225,0.0001517654,0.00004593886,0.00003909078,0.00008200773,0.0002753166,0.001003049],"genre_scores_gemma":[0.9652268,0.0002988518,0.0324212,0.00005732724,0.00001488354,0.00004581882,0.00006593783,0.00004650997,0.001822705],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006552159,"threshold_uncertainty_score":0.002191901,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2010225204","doi":"10.1364/boe.2.000771","title":"Tyrosinase as a dual reporter gene for both photoacoustic and magnetic resonance imaging","year":2011,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Photoacoustic and Ultrasonic Imaging","field":"Engineering","cited_by":83,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta; Cancer Research Institute","keywords":"Photoacoustic imaging in biomedicine; Magnetic resonance imaging; Reporter gene; Nuclear magnetic resonance; Tyrosinase; Dual (grammatical number); Gene; Optics; Medicine; Biology; Physics; Genetics; Gene expression; Radiology; Enzyme; Art","authors":[{"name":"Robert J. Paproski","is_ca":true},{"name":"Alexander Forbrich","is_ca":true},{"name":"Keith Wachowicz","is_ca":true},{"name":"Mary Hitt","is_ca":true},{"name":"Roger J. Zemp","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0122119301661093,"gpt":0.2157642972815095,"spread":0.2035523671154002,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007960795,0.000845045,0.0006274469,0.0005493305,0.0002676884,0.0006194368,0.0005224581,0.0009223898,0.001294572],"category_scores_gemma":[0.0003600219,0.0005069137,0.0007044261,0.000413229,0.0005697586,0.0004608595,0.0004049281,0.001636677,0.0006986887],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006024733,"about_ca_system_score_gemma":0.0004164889,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00087882,"about_ca_topic_score_gemma":0.001400995,"domain_scores_codex":[0.9994407,0.000101656,0.0000362716,0.0001693148,0.0001819899,0.00007010155],"domain_scores_gemma":[0.9996791,0.00009196212,0.00007286898,0.00003971055,0.00006159988,0.00005485787],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000179899,0.00001026703,0.00002271067,0.00001752759,0.000001871107,0.00001232363,0.00000769426,0.00001915676,0.999163,0.00009262132,0.00002453055,0.0006102511],"study_design_scores_gemma":[0.000005326355,0.00005477602,0.000184457,0.000002840395,0.000007265914,0.000162723,0.000005930583,0.0007438873,0.9969614,0.00002410698,0.001843068,0.000004198087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.5778823,0.003004198,0.4117797,0.0007560359,0.0002897213,0.0002972774,0.0008991862,0.001124182,0.003967389],"genre_scores_gemma":[0.6047403,0.002935356,0.3680406,0.0002590116,0.00008244193,0.0006151067,0.002039015,0.0003623505,0.02092574],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.001294572,"threshold_uncertainty_score":0.004371226,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2042846944","doi":"10.1364/boe.3.002647","title":"Extended coherence length megahertz FDML and its application for anterior segment imaging","year":2012,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":83,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"TeraXion (Canada)","funders":"FP7 Health; Deutsche Forschungsgemeinschaft; European Commission","keywords":"Optical coherence tomography; Optics; Laser; Coherence length; Human eye; Coherence (philosophical gambling strategy); Lens (geology); Physics","authors":[{"name":"Wolfgang Wieser","is_ca":false},{"name":"Thomas Klein","is_ca":false},{"name":"Desmond C. Adler","is_ca":false},{"name":"François Trépanier","is_ca":true},{"name":"Christoph M. Eigenwillig","is_ca":false},{"name":"Sebastian Karpf","is_ca":false},{"name":"Joseph M. Schmitt","is_ca":false},{"name":"Robert Huber","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01227348613526602,"gpt":0.257477966399382,"spread":0.245204480264116,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002342792,0.0001557199,0.0001269537,0.0003021988,0.0001154907,0.0002396243,0.0002795871,0.0004166381,0.000960056],"category_scores_gemma":[0.0003898847,0.0001337507,0.00008112491,0.0002572516,0.000279602,0.0004464785,0.0002840531,0.000251268,0.0001875246],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002982299,"about_ca_system_score_gemma":0.0002010973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004766263,"about_ca_topic_score_gemma":0.0008951264,"domain_scores_codex":[0.9998709,0.00001927675,0.000006379305,0.00002634106,0.00006138485,0.00001568409],"domain_scores_gemma":[0.9996899,0.0001326166,0.00007298961,0.00003539193,0.00004362309,0.00002550355],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001091635,0.00001464026,0.0007399314,0.00006193983,0.000004108333,0.0001272821,0.0000651887,0.0007213444,0.9640923,0.001665457,0.0002557155,0.03214296],"study_design_scores_gemma":[0.00005724838,0.000730906,0.006126338,0.00002713538,0.00002699499,0.002707169,0.00004395028,0.04857934,0.9174102,0.001398103,0.02282347,0.00006920194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6490397,0.00753633,0.3358509,0.0009808692,0.0001045178,0.00006200968,0.0003179674,0.0007741412,0.005333493],"genre_scores_gemma":[0.8234965,0.001174083,0.1728078,0.0001979389,0.00007942692,0.00005698864,0.0001376175,0.00004163477,0.00200806],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000960056,"threshold_uncertainty_score":0.003211677,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2791868530","doi":"10.1364/boe.9.001735","title":"Hydrogen peroxide and glucose concentration measurement using optical fiber grating sensors with corrodible plasmonic nanocoatings","year":2018,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Advanced Fiber Optic Sensors","field":"Engineering","cited_by":82,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China; Canada Research Chairs","keywords":"Materials science; Surface plasmon resonance; Fiber Bragg grating; Plasmon; Optical fiber; Grating; Attenuation; Optoelectronics; Fiber optic sensor; Surface plasmon; Optics; Absorption (acoustics); Biosensor; Etching (microfabrication); Fiber; Wavelength; Nanoparticle; Nanotechnology; Layer (electronics)","authors":[{"name":"Xuejun Zhang","is_ca":false},{"name":"Ze Wu","is_ca":false},{"name":"Fu Liu","is_ca":true},{"name":"Qiangqiang Fu","is_ca":false},{"name":"Xiaoyong Chen","is_ca":false},{"name":"Jian Xu","is_ca":false},{"name":"Zhaochuan Zhang","is_ca":false},{"name":"Yunyun Huang","is_ca":false},{"name":"Yong Tang","is_ca":false},{"name":"Tuan Guo","is_ca":false},{"name":"Jacques Albert","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01967114114358821,"gpt":0.2296196202162747,"spread":0.2099484790726865,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000285745,0.0002649591,0.0001307447,0.0001821727,0.000104558,0.0001552511,0.0003601015,0.0004533404,0.000420669],"category_scores_gemma":[0.0004138957,0.0002320404,0.0001783789,0.0001695237,0.0001920425,0.000220398,0.0001687422,0.0002552387,0.0001299583],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003677711,"about_ca_system_score_gemma":0.0002018935,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001911851,"about_ca_topic_score_gemma":0.002489561,"domain_scores_codex":[0.9997773,0.0000434928,0.00001653504,0.00005383053,0.00007742554,0.00003134378],"domain_scores_gemma":[0.9999015,0.00002526719,0.00002275418,0.00001314114,0.00002547917,0.00001182356],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002211205,0.0000294475,0.0005731769,0.00002918118,0.000008236287,0.0000477081,0.0000189218,0.0001018634,0.9958884,0.00006702138,0.00005652121,0.00295843],"study_design_scores_gemma":[0.00000770662,0.0001013375,0.001152556,0.000001525203,0.000007994822,0.00008257928,0.000009429299,0.001326261,0.9970241,0.0000162594,0.0002676054,0.000002647378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9782613,0.002263234,0.01699256,0.000188192,0.00009391834,0.0000419398,0.0001584686,0.0001336351,0.001866875],"genre_scores_gemma":[0.9851769,0.0009740199,0.01190761,0.00009154998,0.00001739506,0.00003161205,0.0001618301,0.00000983918,0.0016293],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001911851,"threshold_uncertainty_score":0.003801525,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2548946164","doi":"10.1364/boe.7.004899","title":"Multi-modal automatic montaging of adaptive optics retinal images","year":2016,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Advanced Vision and Imaging","field":"Computer Science","cited_by":82,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Eye Institute; National Institutes of Health; Foundation Fighting Blindness; Paul MacKall and Evanina Bell MacKall Trust; Research to Prevent Blindness; F. M. Kirby Foundation","keywords":"Computer science; Artificial intelligence; Classification of discontinuities; Computer vision; Discontinuity (linguistics); Adaptive optics; Pattern recognition (psychology); Image processing; Algorithm; Image (mathematics); Optics; Mathematics","authors":[{"name":"Min Chen","is_ca":false},{"name":"Robert F. Cooper","is_ca":false},{"name":"Grace Han","is_ca":false},{"name":"James C. Gee","is_ca":false},{"name":"David H. Brainard","is_ca":false},{"name":"Jessica I. W. Morgan","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0207288376427705,"gpt":0.2890868313553638,"spread":0.2683579937125933,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005118452,0.0004352543,0.0004674356,0.001001947,0.0004301475,0.0008009383,0.0008208491,0.0005706525,0.001257554],"category_scores_gemma":[0.00200685,0.0002560763,0.0005214966,0.0005951372,0.0003305807,0.0007942356,0.000950084,0.0007247757,0.0004551074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000361062,"about_ca_system_score_gemma":0.0005279855,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001577331,"about_ca_topic_score_gemma":0.003188058,"domain_scores_codex":[0.9994587,0.00007794191,0.00003107798,0.0001095615,0.0002746958,0.00004787184],"domain_scores_gemma":[0.9987975,0.0002562675,0.0002255524,0.0003639188,0.0002966482,0.00006013598],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003268056,0.0001097032,0.001788733,0.00009713511,0.00006578554,0.0001704896,0.0002369967,0.02663069,0.3715995,0.002467027,0.001892798,0.5946144],"study_design_scores_gemma":[0.00002524673,0.0002338692,0.006213052,0.00002063295,0.00005338995,0.0007942053,0.00009956975,0.6617183,0.3192159,0.003203881,0.008347681,0.00007417228],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.04212561,0.0001611042,0.9549201,0.00008990486,0.00003086542,0.00004656199,0.00004351385,0.001638058,0.0009442957],"genre_scores_gemma":[0.2121396,0.0001416418,0.7855403,0.00006922114,0.0000391161,0.00006271264,0.0001714011,0.0002197914,0.001616184],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.001577331,"threshold_uncertainty_score":0.004207015,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1963510680","doi":"10.1364/boe.5.003376","title":"Sub-diffusive scattering parameter maps recovered using wide-field high-frequency structured light imaging","year":2014,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Cancer Institute; Canadian Institutes of Health Research; National Institute of Standards and Technology; National Institutes of Health","keywords":"Dimensionless quantity; Scattering; Physics; Range (aeronautics); Optics; Light scattering; Field (mathematics); Mathematics; Materials science; Quantum mechanics","authors":[{"name":"Stephen C. Kanick","is_ca":false},{"name":"David M. McClatchy","is_ca":false},{"name":"Venkataramanan Krishnaswamy","is_ca":false},{"name":"Jonathan T. Elliott","is_ca":false},{"name":"Keith D. Paulsen","is_ca":false},{"name":"Brian W. Pogue","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01033512679251802,"gpt":0.2769212219342743,"spread":0.2665860951417563,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000245568,0.0003267045,0.000171109,0.0005216067,0.00008385886,0.0003156959,0.000205965,0.0003248271,0.0005867257],"category_scores_gemma":[0.0006619365,0.0001753435,0.0001709473,0.0002796057,0.0002978363,0.0008133902,0.0002668628,0.0002850879,0.0002489884],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002079215,"about_ca_system_score_gemma":0.0002032364,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003785093,"about_ca_topic_score_gemma":0.0005250218,"domain_scores_codex":[0.9999197,0.00001359328,0.00000292736,0.00002136786,0.0000319852,0.00001050971],"domain_scores_gemma":[0.9997813,0.00008785338,0.00004320838,0.00003878501,0.00003428328,0.00001450347],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003001761,0.00007369643,0.001561366,0.0001200192,0.00002379877,0.0001951301,0.0001439714,0.04089506,0.9296967,0.002426795,0.000151737,0.02441162],"study_design_scores_gemma":[0.00004126017,0.000255397,0.008094062,0.00001668125,0.00003528489,0.0005589289,0.0001435843,0.5196818,0.4654765,0.004608597,0.001024108,0.0000637172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7636663,0.0002197303,0.2339041,0.0000624376,0.00001135069,0.00002655616,0.0001009505,0.0003521888,0.001656359],"genre_scores_gemma":[0.9411614,0.0002327391,0.05783695,0.00003327489,0.000008449265,0.00001487019,0.0001137169,0.00004409371,0.0005544327],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005867257,"threshold_uncertainty_score":0.001962781,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2767019328","doi":"10.1364/boe.8.005098","title":"Non-invasive assessment of human cone photoreceptor function","year":2017,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":81,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Eye Institute; National Institutes of Health; Foundation Fighting Blindness; Research to Prevent Blindness; Glaucoma Research Foundation; F. M. Kirby Foundation","keywords":"Photopigment; Optics; Stimulus (psychology); Spectral sensitivity; Retina; Physics; Wavelength","authors":[{"name":"Robert F. Cooper","is_ca":false},{"name":"William S. Tuten","is_ca":false},{"name":"Alfredo Dubra","is_ca":false},{"name":"David H. Brainard","is_ca":false},{"name":"Jessica I. W. Morgan","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06319132469275926,"gpt":0.3763563514395613,"spread":0.313165026746802,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003372075,0.0003252578,0.000175203,0.0002151578,0.0001888464,0.0002403523,0.000220117,0.0002803395,0.001929796],"category_scores_gemma":[0.0003379723,0.00009518981,0.00008974239,0.0001213722,0.0002179883,0.0002507561,0.0002025691,0.000320638,0.0004162004],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001447816,"about_ca_system_score_gemma":0.0002566893,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007811427,"about_ca_topic_score_gemma":0.001623031,"domain_scores_codex":[0.9997967,0.00003304805,0.00001105479,0.00004777964,0.00009231742,0.00001906933],"domain_scores_gemma":[0.9998579,0.00003877226,0.00001694316,0.0000175202,0.00004475668,0.0000241275],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004458915,0.00003078115,0.0004410276,0.00003020064,0.000003027208,0.00002962052,0.00002205453,0.00002369834,0.9959958,0.00006509225,0.00007789008,0.003236276],"study_design_scores_gemma":[0.000009215069,0.000455666,0.02618381,0.00001408208,0.00002363109,0.0006550405,0.0000853052,0.001949958,0.968229,0.0002528192,0.002124899,0.00001652793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9097577,0.003807022,0.07716993,0.0001458279,0.00006145122,0.0001558492,0.0007000307,0.0002928469,0.007909415],"genre_scores_gemma":[0.9428627,0.003682574,0.04475579,0.0001811995,0.00002822597,0.0002222708,0.0005586348,0.00006408906,0.007644521],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001929796,"threshold_uncertainty_score":0.006455779,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3154464020","doi":"10.1364/boe.425411","title":"High-speed and widefield handheld swept-source OCT angiography with a VCSEL light source","year":2021,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":80,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"National Eye Institute; National Institutes of Health; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Research to Prevent Blindness","keywords":"Mobile device; Optical coherence tomography; Computer science; Retinopathy of prematurity; Medicine; Image quality; Medical imaging; Cath lab; Artificial intelligence; Ophthalmology","authors":[{"name":"Shuibin Ni","is_ca":false},{"name":"Xiang Wei","is_ca":false},{"name":"Ringo Ng","is_ca":true},{"name":"Susan Ostmo","is_ca":false},{"name":"Michael F. Chiang","is_ca":false},{"name":"David Huang","is_ca":false},{"name":"Yali Jia","is_ca":false},{"name":"J. Peter Campbell","is_ca":false},{"name":"Yifan Jian","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00591304724594819,"gpt":0.1930837058483046,"spread":0.1871706586023564,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001961828,0.0003899639,0.0002341563,0.000442878,0.0001639097,0.0003107085,0.000450748,0.0005512081,0.001559894],"category_scores_gemma":[0.0003354675,0.0002598575,0.0002651762,0.0002163327,0.0002148548,0.0003955597,0.0004367726,0.00031672,0.0004101128],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002895021,"about_ca_system_score_gemma":0.0003909494,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008347912,"about_ca_topic_score_gemma":0.00166499,"domain_scores_codex":[0.9997749,0.00003250855,0.00001894858,0.00006105686,0.0000898328,0.00002274934],"domain_scores_gemma":[0.9997131,0.00008305089,0.00005717848,0.00004517419,0.0000545845,0.00004688912],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009222548,0.00007691344,0.001125913,0.00007065814,0.0000158738,0.0009002514,0.0000410744,0.0005844604,0.9557723,0.000597058,0.0008569071,0.03986645],"study_design_scores_gemma":[0.0001756549,0.001742239,0.01970487,0.0001028339,0.0001041677,0.01240564,0.00007639593,0.04867382,0.8871031,0.0007445067,0.02897127,0.000195568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6462508,0.002130083,0.3358114,0.0009895943,0.0004650944,0.0004180185,0.0003770629,0.002354176,0.01120374],"genre_scores_gemma":[0.7190878,0.001230652,0.2701766,0.0009653012,0.000162962,0.0002055782,0.0001674587,0.0001167805,0.007886874],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001559894,"threshold_uncertainty_score":0.005218327,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1823356061","doi":"10.1364/boe.6.004599","title":"Hollow core photonic crystal fiber for monitoring leukemia cells using surface enhanced Raman scattering (SERS)","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; University of Ottawa","keywords":"Raman scattering; Photonic-crystal fiber; Materials science; Optics; Optical fiber; Photonic crystal; Optoelectronics; Raman spectroscopy; Core (optical fiber); Physics","authors":[{"name":"Altaf Khetani","is_ca":true},{"name":"Ali Momenpour","is_ca":true},{"name":"Emilio I. Alarcón","is_ca":true},{"name":"Hanan Anis","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04321225153708329,"gpt":0.3476713548695133,"spread":0.30445910333243,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003751484,0.0004157252,0.0002494175,0.0003044095,0.0001738733,0.0001939929,0.000382677,0.0005532712,0.000434276],"category_scores_gemma":[0.0002881302,0.0001557125,0.0002150122,0.0002123444,0.0003122211,0.0004941633,0.0002750671,0.0003331552,0.0002515612],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003749036,"about_ca_system_score_gemma":0.000367673,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008423204,"about_ca_topic_score_gemma":0.001402165,"domain_scores_codex":[0.9996425,0.00004606371,0.00001868915,0.00009547545,0.0001677152,0.0000296033],"domain_scores_gemma":[0.9997855,0.00005865228,0.00006456699,0.00001974666,0.00005687105,0.00001474138],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002778165,0.00001189886,0.0001702595,0.00002944478,0.000002226267,0.00002248486,0.00001318436,0.000162068,0.9935217,0.0001304343,0.00004260785,0.005865709],"study_design_scores_gemma":[0.000004509813,0.0001003003,0.0005429882,0.000002580761,0.000006245374,0.0001641378,0.00000990164,0.005479149,0.9926721,0.00006263294,0.0009468994,0.000008568468],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8084498,0.002977909,0.1841749,0.0003372684,0.0001201062,0.0001209811,0.000184522,0.000806624,0.002827829],"genre_scores_gemma":[0.7936908,0.001254988,0.2025531,0.0001062247,0.0000385196,0.00006126537,0.0001357775,0.00003627672,0.002122992],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008423204,"threshold_uncertainty_score":0.002720118,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2019524855","doi":"10.1364/boe.5.000539","title":"In-Vivo functional optical-resolution photoacoustic microscopy with stimulated Raman scattering fiber-laser source","year":2014,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Photoacoustic and Ultrasonic Imaging","field":"Engineering","cited_by":77,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Canadian Cancer Society; University of Alberta; Cancer Research Institute","keywords":"Optics; Materials science; Raman scattering; Microscopy; Laser; Photoacoustic imaging in biomedicine; Resolution (logic); Optical fiber; Preclinical imaging; Fiber laser; Raman spectroscopy; In vivo; Physics; Computer science; Biology","authors":[{"name":"Parsin Haji Reza","is_ca":true},{"name":"Alexander Forbrich","is_ca":true},{"name":"Roger J. Zemp","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006042994697167114,"gpt":0.2057683576767597,"spread":0.1997253629795926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004941786,0.0005854348,0.0002513569,0.0002773114,0.0001839425,0.0002527326,0.0004837944,0.0005084235,0.001597448],"category_scores_gemma":[0.0002392786,0.0003098445,0.000184072,0.0001047665,0.000325051,0.0005130067,0.0002775074,0.0004297051,0.0004329201],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002109874,"about_ca_system_score_gemma":0.0002366375,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003936735,"about_ca_topic_score_gemma":0.0005720336,"domain_scores_codex":[0.9998659,0.00003137408,0.000006198814,0.0000384704,0.00003734259,0.00002068371],"domain_scores_gemma":[0.9997995,0.0000670774,0.00004086037,0.00003413677,0.00003329241,0.00002510399],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002740616,0.000008251171,0.00003106879,0.00001672309,0.000001336881,0.00001140783,0.000004173048,0.00004133261,0.9989915,0.00004736995,0.00001568395,0.0008037122],"study_design_scores_gemma":[0.000008584437,0.0001463451,0.0007161247,0.00000294146,0.000008608054,0.0002676733,0.00000939296,0.002563169,0.9952013,0.00006320884,0.001006865,0.000005774597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7601155,0.001313447,0.2342718,0.0003062012,0.00007141862,0.0002011265,0.0003539803,0.0009336583,0.002432863],"genre_scores_gemma":[0.7215455,0.001437191,0.2716945,0.0001037415,0.00005291499,0.0003639218,0.0003312288,0.0001264251,0.004344576],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001597448,"threshold_uncertainty_score":0.005343974,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3016528875","doi":"10.1364/boe.390782","title":"Imaging intracellular motion with dynamic micro-optical coherence tomography","year":2020,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":75,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Massachusetts General Hospital; Remondi Family Foundation","keywords":"Optical coherence tomography; Intracellular; Coherence (philosophical gambling strategy); Pixel; Optics; Contrast (vision); Computer science; Physics; Biology; Cell biology","authors":[{"name":"Hui Min Leung","is_ca":false},{"name":"Michelle L. Wang","is_ca":false},{"name":"Hany Osman","is_ca":false},{"name":"Elham Abouei","is_ca":true},{"name":"Calum MacAulay","is_ca":false},{"name":"Michele Follen","is_ca":false},{"name":"Joseph A. Gardecki","is_ca":false},{"name":"Guillermo J. Tearney","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00722556007625264,"gpt":0.2083650503951572,"spread":0.2011394903189045,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001213101,0.0002032126,0.0001509555,0.0003336704,0.0001364178,0.0003336482,0.0002569288,0.0003456201,0.0003877174],"category_scores_gemma":[0.0002816939,0.0001643443,0.0001031985,0.000250312,0.0002346905,0.0004289154,0.0003037251,0.0002686111,0.0001234552],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003670921,"about_ca_system_score_gemma":0.0002522974,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009445358,"about_ca_topic_score_gemma":0.00227463,"domain_scores_codex":[0.9998955,0.00001340329,0.000005766915,0.00002553347,0.00004617104,0.00001374875],"domain_scores_gemma":[0.9999095,0.00003647622,0.00002249705,0.000009298903,0.00001490997,0.000007250133],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003093587,0.00001053954,0.0004796943,0.0000581487,0.000005279159,0.00006580156,0.00003099661,0.0009398217,0.9845511,0.00104605,0.0002036746,0.01257779],"study_design_scores_gemma":[0.00002979732,0.0002342945,0.00543048,0.00002534922,0.00003001216,0.001002999,0.00008594696,0.05380573,0.9228665,0.001214702,0.01523084,0.00004339543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5131214,0.008452219,0.4680076,0.001390256,0.0001426732,0.0001329896,0.0005100109,0.0005539591,0.007688867],"genre_scores_gemma":[0.6939756,0.004476487,0.2980894,0.0004794339,0.000088072,0.0001336205,0.0002656059,0.00003953938,0.002452203],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009445358,"threshold_uncertainty_score":0.002663434,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W228641836","doi":"10.1364/boe.6.002191","title":"Adaptive-optics SLO imaging combined with widefield OCT and SLO enables precise 3D localization of fluorescent cells in the mouse retina","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":73,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of General Medical Sciences; University of California, Davis; National Institutes of Health; Simon Fraser University; National Eye Institute; University of Southern California","keywords":"Retina; Adaptive optics; Optics; Fluorescence; Optical coherence tomography; Computer science; Physics","authors":[{"name":"Robert J. Zawadzki","is_ca":false},{"name":"Pengfei Zhang","is_ca":false},{"name":"Azhar Zam","is_ca":false},{"name":"Eric B. Miller","is_ca":false},{"name":"Mayank Goswami","is_ca":false},{"name":"Xinlei Wang","is_ca":false},{"name":"Ravi S. Jonnal","is_ca":false},{"name":"Sang Hyuck Lee","is_ca":false},{"name":"Dae Yu Kim","is_ca":false},{"name":"John G. Flannery","is_ca":false},{"name":"John S. Werner","is_ca":false},{"name":"Marie E. Burns","is_ca":false},{"name":"Edward N. Pugh","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01357753250556228,"gpt":0.213708286527715,"spread":0.2001307540221527,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006711061,0.0007612551,0.0003887287,0.001134995,0.0003262457,0.0005067246,0.0004617005,0.0005131725,0.001117011],"category_scores_gemma":[0.0002881212,0.000543508,0.0005057253,0.0003585558,0.0003636215,0.0006569733,0.0006596492,0.0009741849,0.0003998699],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003722596,"about_ca_system_score_gemma":0.000645565,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008379678,"about_ca_topic_score_gemma":0.002009107,"domain_scores_codex":[0.9996687,0.00005109674,0.00002939914,0.00007636867,0.0001103642,0.00006404753],"domain_scores_gemma":[0.999587,0.00009250964,0.000108929,0.00006429656,0.00007029585,0.00007702287],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002376257,0.00001182677,0.0001810745,0.00002013495,0.000002413091,0.00003194561,0.000009542441,0.0001124961,0.9979402,0.0001446336,0.00002693833,0.001494993],"study_design_scores_gemma":[0.00001850051,0.0002412361,0.006182121,0.00001740828,0.00001752021,0.0005261344,0.00002172616,0.007417289,0.9835323,0.0001666239,0.001841538,0.00001759752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.809991,0.0008389791,0.1833083,0.0002098421,0.00003525727,0.0002047408,0.0007247529,0.0014108,0.003276333],"genre_scores_gemma":[0.6743511,0.001259302,0.3190199,0.0001649275,0.00004452124,0.0005049069,0.000784697,0.0003133295,0.003557252],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001134995,"threshold_uncertainty_score":0.003736794,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1988824938","doi":"10.1364/boe.1.000812","title":"PDE-constrained multispectral imaging of tissue chromophores with the equation of radiative transfer","year":2010,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Cancer Institute; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Multispectral image; Inverse problem; Hessian matrix; Radiance; Computer science; Chromophore; Hyperspectral imaging; Optics; Wavelength; Iterative reconstruction; Radiative transfer; Biological system; Algorithm; Physics; Mathematics; Applied mathematics; Artificial intelligence; Mathematical analysis","authors":[{"name":"Hyun Keol Kim","is_ca":false},{"name":"Molly Flexman","is_ca":false},{"name":"Darrell J. Yamashiro","is_ca":false},{"name":"Jessica J. Kandel","is_ca":false},{"name":"Andreas H. Hielscher","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00938067563683599,"gpt":0.2865999395041929,"spread":0.2772192638673569,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003987149,0.0005218934,0.0004837248,0.000321914,0.0002034601,0.0005642085,0.001049374,0.0008851375,0.001442459],"category_scores_gemma":[0.0009680746,0.0003831446,0.0008706872,0.0003029061,0.00060447,0.0009256926,0.0008031073,0.0009194757,0.0004869913],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004997868,"about_ca_system_score_gemma":0.001092464,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002823641,"about_ca_topic_score_gemma":0.002006565,"domain_scores_codex":[0.9997874,0.00003877485,0.000008724919,0.00003417886,0.0001188882,0.00001199504],"domain_scores_gemma":[0.9997769,0.0001032943,0.00003027499,0.00003290585,0.00003868284,0.00001792077],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004956902,0.0001059129,0.0005353909,0.0002747021,0.00006263453,0.000334108,0.0001339811,0.7959251,0.07760544,0.08155539,0.002057621,0.04136012],"study_design_scores_gemma":[0.00000608939,0.00001050159,0.00006569057,0.000003600993,0.000003765034,0.00007206885,0.000003266676,0.9914849,0.003451823,0.003592646,0.001298205,0.000007379885],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.003071239,0.00006786515,0.9955082,0.00009602144,0.00001704773,0.00002161475,0.00003310055,0.0001104262,0.001074472],"genre_scores_gemma":[0.1593219,0.0004834124,0.8305096,0.0002340022,0.00005515075,0.0002367603,0.0002168462,0.0002170005,0.008725285],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.002823641,"threshold_uncertainty_score":0.00561446,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1119887047","doi":"10.1364/boe.6.003494","title":"Label-free surface-enhanced Raman spectroscopy for detection of colorectal cancer and precursor lesions using blood plasma","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; University of British Columbia","keywords":"Colorectal cancer; Surface-enhanced Raman spectroscopy; Raman spectroscopy; Spectroscopy; Cancer detection; Materials science; Pathology; Medicine; Nuclear magnetic resonance; Biomedical engineering; Cancer; Raman scattering; Optics; Internal medicine; Physics","authors":[{"name":"Shangyuan Feng","is_ca":true},{"name":"Wenbo Wang","is_ca":true},{"name":"Isabella T. Tai","is_ca":true},{"name":"Guannan Chen","is_ca":false},{"name":"Rong Chen","is_ca":false},{"name":"Haishan Zeng","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0293782463652414,"gpt":0.3422173987647645,"spread":0.3128391523995231,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005885168,0.0003995525,0.0002944059,0.0004710262,0.0001669876,0.000270889,0.0003359575,0.0006101098,0.0007739006],"category_scores_gemma":[0.0005995933,0.0002517618,0.0002932954,0.0003217416,0.0002077153,0.0003074932,0.000241372,0.0004160502,0.0004880427],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001575363,"about_ca_system_score_gemma":0.0001829206,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002569121,"about_ca_topic_score_gemma":0.0006265859,"domain_scores_codex":[0.9994465,0.0001917452,0.00001797845,0.0001087854,0.000205992,0.00002903887],"domain_scores_gemma":[0.9997633,0.00009112214,0.00005326743,0.00002288617,0.00004928688,0.00002005328],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001488867,0.0000486254,0.001173167,0.00007189975,0.000013785,0.00005395318,0.00002354712,0.0000911656,0.9843271,0.00009686099,0.0001302403,0.01382073],"study_design_scores_gemma":[0.00002729325,0.0006095635,0.005512057,0.000008689468,0.00004069704,0.0006706324,0.00003648793,0.008480621,0.9827084,0.000199012,0.001683123,0.00002351457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8212439,0.007040442,0.1667755,0.0004662296,0.0002179412,0.0001281844,0.0003034231,0.0007558293,0.003068575],"genre_scores_gemma":[0.8887987,0.001941665,0.1049105,0.0002820372,0.00007007993,0.00008288724,0.0002863956,0.00003480538,0.003593099],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007739006,"threshold_uncertainty_score":0.003112435,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1980570423","doi":"10.1364/boe.2.000696","title":"Wide-field multiphoton imaging of cellular dynamics in thick tissue by temporal focusing and patterned illumination","year":2011,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Optics; Optical sectioning; Multiphoton fluorescence microscope; Materials science; Optical imaging; Live cell imaging; Calcium imaging; Microscopy; Physics; Chemistry; Calcium; Fluorescence","authors":[{"name":"Olivier D. Therrien","is_ca":true},{"name":"Benoît Aubé","is_ca":true},{"name":"Stéphane Pagès","is_ca":true},{"name":"Paul De Koninck","is_ca":true},{"name":"Daniel Côté","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007137080722144829,"gpt":0.2549315630565787,"spread":0.2477944823344338,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001674566,0.0003302151,0.0001930121,0.0002258391,0.0001690248,0.0003308109,0.0004081095,0.0003653949,0.00051138],"category_scores_gemma":[0.0001843972,0.0002963001,0.0001696644,0.0002207818,0.0003016007,0.0005450739,0.0005347015,0.0004684638,0.000165056],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002647427,"about_ca_system_score_gemma":0.0001822722,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003944043,"about_ca_topic_score_gemma":0.0007874393,"domain_scores_codex":[0.9999112,0.000007880592,0.000005524616,0.00002658673,0.00003142503,0.00001739585],"domain_scores_gemma":[0.9998711,0.00003995368,0.00004126844,0.00001814555,0.00001176086,0.00001769989],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001002708,0.000003724798,0.00004674277,0.00001279981,0.000001742375,0.0000301373,0.000006741948,0.0001461565,0.9985325,0.00009966277,0.00001593188,0.001093753],"study_design_scores_gemma":[0.00001078919,0.0001066234,0.00217727,0.000006190736,0.000006807453,0.0004970726,0.00001816136,0.007151606,0.9887503,0.0002483064,0.00101506,0.00001174969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.8619118,0.001746528,0.1324663,0.0001750037,0.00004026256,0.0000803642,0.0002130615,0.000257112,0.003109709],"genre_scores_gemma":[0.8264829,0.001931283,0.1686552,0.0001104075,0.00003471073,0.0001439635,0.0001526902,0.00005106557,0.002437785],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.00051138,"threshold_uncertainty_score":0.001920879,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2890643549","doi":"10.1364/boe.9.004936","title":"Characterization of coronary artery pathological formations from OCT imaging using deep learning","year":2018,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Coronary Interventions and Diagnostics","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Polytechnique Montréal; Centre Hospitalier Universitaire Sainte-Justine; École de Technologie Supérieure","funders":"Fonds de recherche du Québec – Nature et technologies","keywords":"Optical coherence tomography; Medicine; Deep learning; Coronary artery disease; Radiology; Pathological; Myocardial infarction; Artery; Convolutional neural network; Internal medicine; Cardiology; Artificial intelligence; Computer science","authors":[{"name":"Atefeh Abdolmanafi","is_ca":true},{"name":"Luc Duong","is_ca":true},{"name":"Nagib Dahdah","is_ca":true},{"name":"Ibrahim Ragui Adib","is_ca":false},{"name":"Farida Chériet","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02497555735997487,"gpt":0.2893856437061136,"spread":0.2644100863461387,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006810195,0.0005396645,0.0003332197,0.000972739,0.0001449624,0.0005115067,0.0003335788,0.0005731261,0.0003975447],"category_scores_gemma":[0.001316943,0.0001692987,0.0004086617,0.0003202076,0.0002165847,0.0005464288,0.0003496176,0.0003685695,0.0001786608],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002816595,"about_ca_system_score_gemma":0.0002905949,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001251128,"about_ca_topic_score_gemma":0.002270224,"domain_scores_codex":[0.9998019,0.00004154151,0.00001634302,0.00004123388,0.0000552203,0.00004377727],"domain_scores_gemma":[0.9995634,0.0001385583,0.00009771182,0.00005374219,0.0001201666,0.00002647407],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007047345,0.0004266017,0.05647647,0.0002136389,0.0002129737,0.0006992235,0.0001622863,0.237918,0.2466326,0.001418927,0.001435465,0.453699],"study_design_scores_gemma":[0.000006214402,0.00009515428,0.01240186,0.00001422158,0.000029839,0.0002605513,0.000042086,0.9514523,0.03476603,0.0007016532,0.0002159414,0.00001415365],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7465391,0.0004449737,0.2507284,0.000181157,0.0000221363,0.00006897078,0.0002629394,0.0005826537,0.001169589],"genre_scores_gemma":[0.9476838,0.0001547105,0.05133427,0.00004655895,0.000009664151,0.00002514793,0.0002899787,0.00002053332,0.0004352716],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001251128,"threshold_uncertainty_score":0.003601611,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2016864845","doi":"10.1364/boe.4.001504","title":"Observing single protein binding by optical transmission through a double nanohole aperture in a metal film","year":2013,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Nanowire Synthesis and Applications","field":"Engineering","cited_by":68,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"","keywords":"Extraordinary optical transmission; Optics; Transmission (telecommunications); Materials science; Aperture (computer memory); Nanotechnology; Surface plasmon; Physics; Plasmon; Computer science; Surface plasmon polariton; Telecommunications","authors":[{"name":"Ahmed Al Balushi","is_ca":true},{"name":"Ana Zehtabi-Oskuie","is_ca":true},{"name":"Reuven Gordon","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01577070998635376,"gpt":0.2198030646086507,"spread":0.2040323546222969,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002478829,0.0004454874,0.0003371372,0.0003153016,0.0002948165,0.0004172694,0.0008935439,0.0005297233,0.001182015],"category_scores_gemma":[0.0003949813,0.0003741206,0.0002232409,0.0002244562,0.0003610131,0.0005854426,0.0003887261,0.0005454682,0.000321156],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005662598,"about_ca_system_score_gemma":0.0002610345,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001515111,"about_ca_topic_score_gemma":0.001699032,"domain_scores_codex":[0.9997411,0.00001784795,0.00001030064,0.00008067354,0.0001014393,0.00004861441],"domain_scores_gemma":[0.9996349,0.0001462467,0.0000839882,0.00003951489,0.00004847069,0.00004689386],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002091605,0.00001686893,0.000111165,0.0000263466,0.000002860736,0.00005797328,0.00003357307,0.00007089905,0.9988593,0.0001388981,0.00002841917,0.0006327519],"study_design_scores_gemma":[0.00001265153,0.000107926,0.0008852194,0.000003498081,0.000007762868,0.00009971111,0.00002874472,0.005215963,0.9930118,0.00004862906,0.0005725586,0.00000544421],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9832079,0.0003768984,0.01432984,0.0001050994,0.00004127544,0.00003970659,0.00009710601,0.0002066303,0.00159549],"genre_scores_gemma":[0.9747797,0.0004621274,0.02207648,0.00007338161,0.00001638483,0.00005626804,0.00008920528,0.00003658056,0.002409971],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001515111,"threshold_uncertainty_score":0.004108489,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2018906582","doi":"10.1364/boe.3.002761","title":"Broadband continuous-wave technique to measure baseline values and changes in the tissue chromophore concentrations","year":2012,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Lawson Health Research Institute; Toronto Metropolitan University","funders":"Heart and Stroke Foundation of Canada","keywords":"Chromophore; Indocyanine green; Multispectral image; Materials science; Optics; Continuous wave; Wavelength; Photon diffusion; Diffuse optical imaging; Near-infrared spectroscopy; Spectroscopy; Absorption (acoustics); Biomedical engineering; Chemistry; Optoelectronics; Physics; Computer science; Medicine; Laser","authors":[{"name":"Hadi Zabihi Yeganeh","is_ca":true},{"name":"Vladislav Toronov","is_ca":true},{"name":"Jonathan T. Elliott","is_ca":true},{"name":"Mamadou Diop","is_ca":true},{"name":"Ting‐Yim Lee","is_ca":true},{"name":"Keith St. Lawrence","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02520076237296042,"gpt":0.3161274595011218,"spread":0.2909266971281613,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006518911,0.000525652,0.0003198244,0.0007158311,0.000198764,0.0003110339,0.0005701456,0.0007052207,0.001707881],"category_scores_gemma":[0.0007362538,0.0002807466,0.0002006229,0.000726618,0.0003392337,0.0006274086,0.0003030424,0.0009280364,0.0008478028],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003095575,"about_ca_system_score_gemma":0.0004009914,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004589035,"about_ca_topic_score_gemma":0.0007949992,"domain_scores_codex":[0.9996821,0.00005043277,0.00001240221,0.00008656857,0.000147411,0.00002113973],"domain_scores_gemma":[0.9994407,0.0002165472,0.000105259,0.00006625494,0.0001377633,0.0000335037],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006212971,0.00007038943,0.0003166783,0.00008434368,0.0000105703,0.00002963784,0.0000231436,0.0004069457,0.9819533,0.0004525016,0.000274657,0.01631575],"study_design_scores_gemma":[0.00001717032,0.0005574499,0.004209131,0.00002495695,0.00004538374,0.0004271112,0.000032107,0.02206456,0.9665049,0.0006084131,0.005471015,0.00003773714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.08556895,0.001559521,0.9077069,0.0001551696,0.0001371024,0.0001269296,0.0002893591,0.001135137,0.003320921],"genre_scores_gemma":[0.3563198,0.003152479,0.6344249,0.0004363272,0.000110031,0.0005608856,0.0003415277,0.0001706456,0.004483474],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.001707881,"threshold_uncertainty_score":0.005713463,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2271193049","doi":"10.1364/boe.7.000001","title":"Wavefront sensorless adaptive optics fluorescence biomicroscope for in vivo retinal imaging in mice","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":66,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"National Eye Institute; Alzheimer Society of B.C.; Natural Sciences and Engineering Research Council of Canada; Alzheimer Society Research Program; University of California, Davis; Fondation pour la Recherche sur Alzheimer; Canadian Institutes of Health Research; Alzheimer Society; Michael Smith Health Research BC; National Science Foundation","keywords":"Adaptive optics; Wavefront; Optics; Retinal; Deformable mirror; Optical coherence tomography; Preclinical imaging; Fluorescence; Fluorescence-lifetime imaging microscopy; In vivo; Computer science; Physics; Ophthalmology; Medicine; Biology","authors":[{"name":"Daniel J. Wahl","is_ca":true},{"name":"Yifan Jian","is_ca":true},{"name":"Stefano Bonora","is_ca":false},{"name":"Robert J. Zawadzki","is_ca":false},{"name":"Marinko V. Šarunic","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02180973166241904,"gpt":0.2598677089855739,"spread":0.2380579773231548,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006784633,0.0008653257,0.0003557635,0.0009727622,0.0004494997,0.0003366597,0.0006558076,0.001011506,0.002839761],"category_scores_gemma":[0.0002772797,0.0004791474,0.0004994738,0.00028449,0.0004458073,0.0005308414,0.0004151649,0.00162385,0.000858989],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005830158,"about_ca_system_score_gemma":0.000796878,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001465777,"about_ca_topic_score_gemma":0.003714934,"domain_scores_codex":[0.9997397,0.00003645848,0.00002192219,0.00007280484,0.00008972664,0.00003933434],"domain_scores_gemma":[0.999637,0.00007954704,0.0000999468,0.00006431872,0.00005172223,0.00006743617],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003553096,0.00002774043,0.00005705559,0.00002135792,0.000003192287,0.00003822674,0.00001603153,0.0001310654,0.997412,0.0003483227,0.0001397644,0.001769688],"study_design_scores_gemma":[0.00004391178,0.0002690595,0.001738008,0.00002252986,0.00001719692,0.0003491145,0.00001506571,0.00794603,0.9845145,0.0002505273,0.004818201,0.00001580482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.372431,0.001248365,0.6120093,0.0008664893,0.0002048322,0.0009057914,0.002201026,0.003687621,0.006445555],"genre_scores_gemma":[0.3323367,0.001187251,0.6525986,0.0002881927,0.00002710977,0.001611935,0.000857136,0.0005370743,0.010556],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.002839761,"threshold_uncertainty_score":0.009499967,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2576136329","doi":"10.1364/boe.8.000800","title":"Sub-micrometer axial resolution OCT for in-vivo imaging of the cellular structure of healthy and keratoconic human corneas","year":2017,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Corneal surgery and disorders","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Optics; Preclinical imaging; Resolution (logic); In vivo; Micrometer; Optical coherence tomography; Materials science; Image resolution; Optical imaging; Biomedical engineering; Medicine; Biology; Computer science; Physics","authors":[{"name":"Kostadinka Bizheva","is_ca":true},{"name":"Bingyao Tan","is_ca":true},{"name":"Benjamin MacLelan","is_ca":true},{"name":"Olivera Kralj","is_ca":true},{"name":"Mojtaba Hajialamdari","is_ca":true},{"name":"Denise Hileeto","is_ca":true},{"name":"Luigina Sorbara","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01900225253288773,"gpt":0.2844164567660566,"spread":0.2654142042331689,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004519303,0.0002276825,0.0002315921,0.0007051515,0.000273783,0.0002811907,0.0002055753,0.0003437655,0.002490942],"category_scores_gemma":[0.0004310596,0.000243369,0.0001453565,0.0003680191,0.0001743978,0.0003816017,0.0002520353,0.0004348163,0.0002882336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001552231,"about_ca_system_score_gemma":0.0003172836,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001115646,"about_ca_topic_score_gemma":0.00397989,"domain_scores_codex":[0.9998624,0.00003866491,0.000008998348,0.00001678236,0.00005005377,0.00002313981],"domain_scores_gemma":[0.999721,0.0001191323,0.00002316641,0.0000642056,0.00003899569,0.00003354789],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000323957,0.00009641553,0.002491602,0.00007933717,0.00002022373,0.0001363989,0.00006257302,0.0004129505,0.9801937,0.000406215,0.0003929485,0.01538378],"study_design_scores_gemma":[0.0001186916,0.001790805,0.2020537,0.00005508239,0.0001838645,0.008765245,0.0002905486,0.03259533,0.7437312,0.001074755,0.0092671,0.00007357635],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9327812,0.001858719,0.05796713,0.0002577779,0.00007202524,0.0002443566,0.001322638,0.0004533662,0.005042613],"genre_scores_gemma":[0.920274,0.0008733097,0.07573602,0.0001708062,0.0000200653,0.000166004,0.0005882732,0.00006940816,0.002102144],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002490942,"threshold_uncertainty_score":0.008333027,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2087439386","doi":"10.1364/boe.5.003562","title":"Characterization of collagen in non-small cell lung carcinoma with second harmonic polarization microscopy","year":2014,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Photoacoustic and Ultrasonic Imaging","field":"Engineering","cited_by":65,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto General Hospital; Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Microscopy; Pathology; Lung cancer; Carcinoma; Polarization (electrochemistry); In vivo; Ex vivo; Second-harmonic generation; Materials science; Optics; Medicine; Chemistry; Biology; Laser; Physics","authors":[{"name":"Ahmad Golaraei","is_ca":true},{"name":"Richard Cisek","is_ca":true},{"name":"Serguei Krouglov","is_ca":true},{"name":"Roya Navab","is_ca":true},{"name":"Carolyn Niu","is_ca":true},{"name":"Shingo Sakashita","is_ca":true},{"name":"Kazuhiro Yasufuku","is_ca":true},{"name":"Ming‐Sound Tsao","is_ca":true},{"name":"Brian C. Wilson","is_ca":true},{"name":"Virginijus Barzda","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.003873172951363932,"gpt":0.1849214955779643,"spread":0.1810483226266004,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002130216,0.0002059522,0.0001017957,0.0003817826,0.0001520424,0.0001645395,0.0001422357,0.0002787763,0.0006628812],"category_scores_gemma":[0.0002576596,0.0001644463,0.0001021476,0.0002306769,0.0002061943,0.0002148992,0.0001287974,0.0002582109,0.0001943654],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001158324,"about_ca_system_score_gemma":0.0001513277,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001145032,"about_ca_topic_score_gemma":0.002089968,"domain_scores_codex":[0.9999025,0.00001919096,0.000004665686,0.00001739964,0.00004081056,0.0000155101],"domain_scores_gemma":[0.9997351,0.00009938562,0.0000356731,0.00002936979,0.00006444009,0.00003607213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002069669,0.000003740244,0.0002447197,0.00001107991,9.166571e-7,0.00002864622,0.00001193579,0.0000212916,0.9992262,0.00002147005,0.000003878049,0.000405405],"study_design_scores_gemma":[0.00000711173,0.0001154248,0.01910603,0.000003778038,0.000008421646,0.0005167745,0.00006376826,0.002204679,0.9771281,0.0000572826,0.0007838975,0.000004684134],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9800565,0.0006997387,0.0169589,0.0000717123,0.00001143398,0.00004276607,0.0002095078,0.00003643947,0.001913039],"genre_scores_gemma":[0.9800782,0.0008474095,0.01610453,0.00003998257,0.00001063715,0.00007425258,0.0003325549,0.00002105196,0.002491392],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001145032,"threshold_uncertainty_score":0.002276659,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2434996845","doi":"10.1364/boe.6.003475","title":"Ultrastructural features of collagen in thyroid carcinoma tissue observed by polarization second harmonic generation microscopy","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Photoacoustic and Ultrasonic Imaging","field":"Engineering","cited_by":65,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; College of Family Physicians of Canada; University Health Network","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; California HIV/AIDS Research Program","keywords":"Ultrastructure; Microscopy; Pathology; Thyroid; Polarization (electrochemistry); Optics; Second-harmonic generation; Carcinoma; Materials science; Chemistry; Medicine; Physics; Internal medicine; Laser","authors":[{"name":"Danielle Tokarz","is_ca":true},{"name":"Richard Cisek","is_ca":true},{"name":"Ahmad Golaraei","is_ca":true},{"name":"L. Sylvia","is_ca":true},{"name":"Virginijus Barzda","is_ca":true},{"name":"Brian C. Wilson","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01720324087399306,"gpt":0.2329942675952388,"spread":0.2157910267212458,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112755,0.000107287,0.00005544286,0.0003918389,0.0001336091,0.0001091194,0.00006821693,0.0001648674,0.0004653643],"category_scores_gemma":[0.0001533505,0.0001377572,0.00007399484,0.0002230414,0.0001858901,0.0001310473,0.0001102671,0.0001266636,0.00009147681],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001019713,"about_ca_system_score_gemma":0.00009139694,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001253571,"about_ca_topic_score_gemma":0.001336866,"domain_scores_codex":[0.999948,0.000009641257,0.000004526345,0.000009625684,0.00001879757,0.000009369301],"domain_scores_gemma":[0.9998678,0.00004046192,0.00002804688,0.00001174894,0.00002537781,0.00002661363],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001297665,0.00000589925,0.004993918,0.00002816125,0.000006580141,0.000247263,0.00008325034,0.00005528538,0.9930836,0.0000472309,0.00001274045,0.00130625],"study_design_scores_gemma":[0.00002330916,0.0003991332,0.4273423,0.00001262787,0.00007309362,0.006818089,0.0004597407,0.003247747,0.5596411,0.0002032901,0.001755772,0.0000238613],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975256,0.0003884803,0.001341688,0.00001526668,0.000003077366,0.000005746409,0.0001205517,0.00001140451,0.0005880413],"genre_scores_gemma":[0.9967824,0.0003652081,0.002025846,0.00001256522,0.000003618853,0.00001153566,0.0001609559,0.000004472814,0.0006334019],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001253571,"threshold_uncertainty_score":0.002492487,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2510524428","doi":"10.1364/boe.7.003659","title":"Assessment of a multi-layered diffuse correlation spectroscopy method for monitoring cerebral blood flow in adults","year":2016,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Robarts Clinical Trials; Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Cerebral blood flow; Biomedical engineering; Imaging phantom; Blood flow; Diffuse optical imaging; Perfusion; Brain tissue; SIGNAL (programming language); Cerebral perfusion pressure; Materials science; Medicine; Nuclear medicine; Tomography; Radiology; Computer science; Anesthesia","authors":[{"name":"Kyle Verdecchia","is_ca":true},{"name":"Mamadou Diop","is_ca":true},{"name":"Albert Lee","is_ca":true},{"name":"Laura Morrison","is_ca":true},{"name":"Ting‐Yim Lee","is_ca":true},{"name":"Keith St. Lawrence","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0209715069513021,"gpt":0.3679002230318887,"spread":0.3469287160805866,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001185577,0.0003571434,0.000174799,0.0003839576,0.0001899837,0.0004691891,0.0003046784,0.0007211923,0.0008653784],"category_scores_gemma":[0.00226745,0.0001232772,0.0001728878,0.0001955891,0.0001693888,0.0003173874,0.0002952641,0.0004134174,0.0002667946],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001905218,"about_ca_system_score_gemma":0.0003574072,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001131666,"about_ca_topic_score_gemma":0.001947143,"domain_scores_codex":[0.9996075,0.0001122474,0.00003131325,0.00009832936,0.0001166085,0.00003392205],"domain_scores_gemma":[0.9991928,0.0002366148,0.0001689283,0.00004837912,0.0002529253,0.0001004132],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004480219,0.0004833308,0.4709756,0.0004346443,0.0003900692,0.001273842,0.0006977125,0.001203809,0.3845105,0.0007579172,0.001591176,0.1332012],"study_design_scores_gemma":[0.0001353172,0.003272734,0.8308023,0.0001242329,0.000494124,0.007258343,0.0004630789,0.02163395,0.1318613,0.0004621873,0.003402309,0.0000901282],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9846549,0.001494903,0.01137041,0.0001532136,0.0000485166,0.00004469755,0.0002329781,0.00007849371,0.001922017],"genre_scores_gemma":[0.9933294,0.0002691413,0.005864212,0.00005953701,0.00002058543,0.00002515465,0.00007244413,0.000009289195,0.0003501404],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.001185577,"threshold_uncertainty_score":0.006270051,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1972105841","doi":"10.1364/boe.6.000580","title":"In vivo imaging of human photoreceptor mosaic with wavefront sensorless adaptive optics optical coherence tomography","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":64,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC; National Eye Institute; Nvidia; Research to Prevent Blindness","keywords":"Adaptive optics; Optical coherence tomography; Wavefront; Optics; Deformable mirror; Wavefront sensor; Computer science; Image quality; Human eye; Preclinical imaging; Computer vision; Physics; Artificial intelligence; In vivo; Image (mathematics)","authors":[{"name":"Kevin Wong","is_ca":true},{"name":"Yifan Jian","is_ca":true},{"name":"Michelle Cua","is_ca":true},{"name":"Stefano Bonora","is_ca":false},{"name":"Robert J. Zawadzki","is_ca":false},{"name":"Marinko V. Šarunic","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01745852154938479,"gpt":0.245614724052744,"spread":0.2281562025033592,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002977432,0.000216148,0.0001521668,0.0002806663,0.0001931997,0.0002383614,0.000129839,0.0002344738,0.0005181533],"category_scores_gemma":[0.0003313525,0.0002148375,0.0001127523,0.0001608698,0.0001928169,0.0002566658,0.0002301395,0.0001734039,0.00009500499],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002146856,"about_ca_system_score_gemma":0.00041587,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001497098,"about_ca_topic_score_gemma":0.003063794,"domain_scores_codex":[0.9999046,0.00001695782,0.000005713441,0.00001892976,0.00004112136,0.00001266497],"domain_scores_gemma":[0.9998966,0.00002310042,0.0000178881,0.00002266373,0.00002339469,0.00001636],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008445895,0.00002571447,0.0006657094,0.00002796995,0.000006570287,0.00008113698,0.00003047175,0.0004810346,0.9939927,0.0001183064,0.00005049708,0.004435513],"study_design_scores_gemma":[0.00004973649,0.000919886,0.02908558,0.00002142147,0.0000434261,0.002580192,0.0001107993,0.02666853,0.9380934,0.0003110203,0.00208042,0.00003570434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9590572,0.0006692893,0.03867651,0.00007849954,0.00001158074,0.00008163618,0.000164792,0.0001516931,0.001108874],"genre_scores_gemma":[0.9176341,0.0005471586,0.08068535,0.00006148236,0.000007721428,0.0000585805,0.0001130062,0.00002824527,0.0008642722],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001497098,"threshold_uncertainty_score":0.002976775,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2087267057","doi":"10.1364/boe.6.001464","title":"Differential diagnosis of human bladder mucosa pathologies in vivo with cross-polarization optical coherence tomography","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":64,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Optical coherence tomography; In vivo; Preclinical imaging; Optics; Diffuse optical imaging; Tomography; Medicine; Pathology; Radiology; Physics; Biology","authors":[{"name":"Elena B. Kiseleva","is_ca":false},{"name":"Mikhail Kirillin","is_ca":false},{"name":"Felix I. Feldchtein","is_ca":false},{"name":"I. Alex Vitkin","is_ca":true},{"name":"Ekaterina Sergeeva","is_ca":false},{"name":"Elena V. Zagaynova","is_ca":false},{"name":"Olga Streltzova","is_ca":false},{"name":"B Shakhov","is_ca":false},{"name":"Ekaterina V. Gubarkova","is_ca":false},{"name":"Natalia D. Gladkova","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01991918528379908,"gpt":0.2661803821002748,"spread":0.2462611968164757,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006970559,0.0003553698,0.0002322216,0.0006832555,0.0002218885,0.0003285201,0.0001615712,0.0005033744,0.0004655009],"category_scores_gemma":[0.0008138224,0.0002853767,0.0001190428,0.0002111939,0.0003690057,0.0003797018,0.0004684377,0.000348126,0.0001319727],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001181194,"about_ca_system_score_gemma":0.0002139977,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002884282,"about_ca_topic_score_gemma":0.0005234313,"domain_scores_codex":[0.999796,0.0000822852,0.00001282514,0.00004198831,0.00004508668,0.00002190088],"domain_scores_gemma":[0.9996237,0.0001913482,0.00004973333,0.00005004697,0.00005329098,0.00003191],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002237913,0.00003637398,0.00394831,0.00007060976,0.00000889254,0.0001889415,0.00007634334,0.0004064919,0.9846869,0.0001048671,0.00004500973,0.01020347],"study_design_scores_gemma":[0.00002316737,0.0004605539,0.03058009,0.00003451464,0.00005983175,0.004704299,0.0001881054,0.0259472,0.9362757,0.0004959789,0.001194588,0.00003597416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8929129,0.002116847,0.1035697,0.0001433373,0.00001640022,0.00006882834,0.0001076247,0.0002088223,0.0008554971],"genre_scores_gemma":[0.9307699,0.001052608,0.0676048,0.00006874319,0.0000100153,0.00004541135,0.00008896853,0.00002085044,0.0003388305],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006970559,"threshold_uncertainty_score":0.003686428,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1969318337","doi":"10.1364/boe.3.002326","title":"On the use of photoacoustics to detect red blood cell aggregation","year":2012,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Photoacoustic and Ultrasonic Imaging","field":"Engineering","cited_by":62,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto Metropolitan University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Hematocrit; Red blood cell; Erythrocyte aggregation; Materials science; Transducer; Bandwidth (computing); Multispectral image; Aggregate (composite); Analytical Chemistry (journal); Optics; Biomedical engineering; Nuclear magnetic resonance; Chemistry; Acoustics; Chromatography; Physics; Nanotechnology; Medicine; Telecommunications; Computer science; Internal medicine","authors":[{"name":"Eno Hysi","is_ca":true},{"name":"Ratan K. Saha","is_ca":false},{"name":"Michael C. Kolios","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02139985480973712,"gpt":0.2152082411238815,"spread":0.1938083863141444,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004175493,0.0002083784,0.0001980909,0.0002452427,0.0001439456,0.0003325025,0.0003322085,0.000394645,0.0005406845],"category_scores_gemma":[0.001100081,0.0001800742,0.0002031498,0.0001895775,0.0005947454,0.0003703319,0.0001866319,0.0002585622,0.0002186361],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002174857,"about_ca_system_score_gemma":0.0001689594,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004688647,"about_ca_topic_score_gemma":0.0005101998,"domain_scores_codex":[0.9997702,0.00005842322,0.000009657751,0.00004839886,0.00009840654,0.00001483601],"domain_scores_gemma":[0.9991384,0.000625375,0.00007501806,0.00005464883,0.0000938471,0.00001274221],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001096644,0.00002457684,0.0007308596,0.0000856121,0.00001146101,0.0001619462,0.00004648403,0.006913021,0.9739501,0.001454154,0.00007730065,0.01643474],"study_design_scores_gemma":[0.00001311152,0.0003565956,0.002481672,0.0000175313,0.00003402232,0.0005160888,0.0000302653,0.08445454,0.9094103,0.0009092701,0.001744761,0.00003183947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7453664,0.004474333,0.2430244,0.0005520426,0.00005925046,0.00006133782,0.00005393911,0.0002212092,0.006187093],"genre_scores_gemma":[0.9497916,0.001759198,0.04751993,0.00008623095,0.0000299664,0.00002439559,0.00002591479,0.00001709475,0.000745749],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005406845,"threshold_uncertainty_score":0.002208233,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3045246573","doi":"10.1364/boe.401200","title":"HER2 biosensing through SPR-envelope tracking in plasmonic optical fiber gratings","year":2020,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Advanced Fiber Optic Sensors","field":"Engineering","cited_by":62,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University; National Research Council Canada","funders":"Fonds De La Recherche Scientifique - FNRS","keywords":"Optics; Plasmon; Optical fiber; Biosensor; Materials science; Surface plasmon resonance; Envelope (radar); Optoelectronics; Nanotechnology; Computer science; Physics; Telecommunications; Nanoparticle","authors":[{"name":"Maxime Lobry","is_ca":false},{"name":"Médéric Loyez","is_ca":false},{"name":"Karima Chah","is_ca":false},{"name":"Eman M. Hassan","is_ca":true},{"name":"Erik Goormaghtigh","is_ca":false},{"name":"Maria C. DeRosa","is_ca":true},{"name":"Ruddy Wattiez","is_ca":false},{"name":"Christophe Caucheteur","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02441406793884449,"gpt":0.2553517644586129,"spread":0.2309376965197684,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003154453,0.0003416307,0.0002496644,0.0002260968,0.0001098258,0.0002656053,0.0003585279,0.0004429689,0.0002491377],"category_scores_gemma":[0.0002821556,0.0002097995,0.0001812283,0.0002285075,0.0002999201,0.0003667608,0.0002420034,0.0003157414,0.0002084925],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003382499,"about_ca_system_score_gemma":0.0001417849,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009013982,"about_ca_topic_score_gemma":0.0008700162,"domain_scores_codex":[0.9997839,0.00003647657,0.00001172848,0.00005635278,0.00007768464,0.0000338474],"domain_scores_gemma":[0.9998608,0.00003612666,0.00004288592,0.00001482181,0.0000307702,0.00001457954],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002868196,0.00001014909,0.0001059425,0.00002524383,0.00000245505,0.00002402838,0.00001504632,0.0005194749,0.9965941,0.0001132814,0.00002213645,0.002539395],"study_design_scores_gemma":[0.000004566885,0.00006737435,0.0006552948,0.000002161502,0.000003522103,0.00007416573,0.000006609034,0.01060829,0.9879628,0.00007283841,0.000535037,0.000007381049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9446502,0.001381916,0.05191041,0.0001439148,0.00004943571,0.00002577925,0.0001052463,0.0003081114,0.001424963],"genre_scores_gemma":[0.9593564,0.001059239,0.03757867,0.00008511495,0.00002271773,0.00001852324,0.00009391243,0.00003181202,0.001753514],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009013982,"threshold_uncertainty_score":0.002454221,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2080293055","doi":"10.1364/boe.4.000038","title":"Characterizing refractive index and thickness of biological tissues using combined multiphoton microscopy and optical coherence tomography","year":2012,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":61,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Optical coherence tomography; Cornea; Refractive index; Microscopy; Materials science; Optics; Biomedical engineering; Confocal microscopy; Stroma; Tomography; Collagen fiber; Pathology; Anatomy; Biology; Optoelectronics; Medicine; Physics","authors":[{"name":"Yifeng Zhou","is_ca":true},{"name":"Kenny K. H. Chan","is_ca":true},{"name":"Tom Lai","is_ca":true},{"name":"Shuo Tang","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0244554732175694,"gpt":0.2799874754562836,"spread":0.2555320022387141,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003998802,0.0005273377,0.0002578441,0.001077769,0.0002680534,0.0004508445,0.0004988149,0.0004465924,0.000487109],"category_scores_gemma":[0.0007317119,0.0004145672,0.0002411327,0.0004995805,0.0003673198,0.0009197827,0.0006176835,0.0004932306,0.0002179663],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003665024,"about_ca_system_score_gemma":0.0003551432,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000969752,"about_ca_topic_score_gemma":0.002823609,"domain_scores_codex":[0.9996411,0.00004384049,0.00001719378,0.00008430562,0.0001899355,0.00002365965],"domain_scores_gemma":[0.9994208,0.0002004772,0.0001783688,0.00007361426,0.00009517811,0.00003168055],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002899357,0.00001276963,0.001944863,0.00006022828,0.0000111284,0.00004572013,0.00003023594,0.0005694855,0.9871868,0.0001255396,0.00004557555,0.009938596],"study_design_scores_gemma":[0.00001740212,0.0002471255,0.02700937,0.00002068226,0.00005557258,0.001149505,0.00007621274,0.02685318,0.9422101,0.0005053072,0.001790441,0.00006501127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7566119,0.003712231,0.2358306,0.0002123328,0.00004935679,0.00009748824,0.0004025717,0.0005052313,0.002578313],"genre_scores_gemma":[0.6934604,0.001984691,0.3020373,0.0001519515,0.00005525373,0.0001950225,0.0002851882,0.00007896035,0.001751282],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001077769,"threshold_uncertainty_score":0.002659202,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2258443153","doi":"10.1364/boe.6.004749","title":"Perioperative cerebral hemodynamics and oxygen metabolism in neonates with single-ventricle physiology","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Congenital Heart Disease Studies","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Research Resources; Harvard Medical School; National Institute of Child Health and Human Development; National Institute of Biomedical Imaging and Bioengineering; National Institutes of Health; Hearst Foundations","keywords":"Hemodynamics; Cerebral blood flow; Medicine; Perioperative; Anesthesia; Ventricle; Etiology; Internal medicine; Cardiology","authors":[{"name":"Mathieu Dehaes","is_ca":true},{"name":"Henry Cheng","is_ca":false},{"name":"Erin M. Buckley","is_ca":false},{"name":"Pei‐Yi Lin","is_ca":false},{"name":"Silvina L. Ferradal","is_ca":false},{"name":"Kathryn Williams","is_ca":false},{"name":"Rutvi Vyas","is_ca":false},{"name":"Katherine Hagan","is_ca":false},{"name":"Daniel Wigmore","is_ca":false},{"name":"Erica McDavitt","is_ca":false},{"name":"Janet S. Soul","is_ca":false},{"name":"Maria Angela Franceschini","is_ca":false},{"name":"Jane W. Newburger","is_ca":false},{"name":"P. Ellen Grant","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01948470807026309,"gpt":0.2596425285568472,"spread":0.2401578204865841,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003592572,0.000277748,0.0003399048,0.0004194855,0.0001612302,0.0002638834,0.0001327073,0.000235639,0.0003354684],"category_scores_gemma":[0.001285651,0.0001126507,0.0001198102,0.0001773762,0.0002838864,0.0001930454,0.0002652359,0.0003183566,0.00004636227],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002526168,"about_ca_system_score_gemma":0.0002015083,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000696236,"about_ca_topic_score_gemma":0.0007381967,"domain_scores_codex":[0.9998329,0.0000460894,0.000021993,0.00003700277,0.0000384859,0.00002342403],"domain_scores_gemma":[0.9995971,0.0001397893,0.0001291315,0.00002307078,0.00003254396,0.00007828885],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001722575,0.0001844972,0.9210302,0.0001131284,0.00005850443,0.004258911,0.0007307209,0.000247971,0.04433637,0.0001168524,0.00009638568,0.027104],"study_design_scores_gemma":[0.00001467773,0.002194802,0.9817691,0.00002303314,0.00006840674,0.003878084,0.0008279115,0.0005040489,0.01044411,0.00008167227,0.0001814019,0.00001282271],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996513,0.0001679655,0.00009205916,0.00000643956,0.000002533367,0.000002576031,0.00001017908,0.000001316916,0.00006560675],"genre_scores_gemma":[0.9992613,0.0003212074,0.0003119895,0.00001206385,0.000006429133,0.00001149955,0.00003081687,0.000001229758,0.00004335936],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000696236,"threshold_uncertainty_score":0.001899958,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1983442486","doi":"10.1364/boe.4.000481","title":"Sensitive and specific discrimination of pathogenic and nonpathogenic Escherichia coli using Raman spectroscopy—a comparison of two multivariate analysis techniques","year":2013,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Windsor","funders":"Natural Sciences and Engineering Research Council of Canada; University of Windsor","keywords":"Escherichia coli; Linear discriminant analysis; Raman spectroscopy; Pathogenic bacteria; Principal component analysis; Partial least squares regression; Biology; Resonance Raman spectroscopy; Strain (injury); Microbiology; Analytical Chemistry (journal); Biological system; Chemistry; Optics; Bacteria; Chromatography; Genetics; Artificial intelligence; Mathematics; Physics; Computer science; Statistics; Gene","authors":[{"name":"Khozima Hamasha","is_ca":false},{"name":"Qassem I. Mohaidat","is_ca":false},{"name":"Russell A. Putnam","is_ca":true},{"name":"Ryan C. Woodman","is_ca":true},{"name":"Sunil Palchaudhuri","is_ca":false},{"name":"Steven J. Rehse","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01895957788538501,"gpt":0.3427714388527121,"spread":0.3238118609673271,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002674295,0.0007452279,0.0005285449,0.00128763,0.000230448,0.0006502471,0.0004837003,0.0007788942,0.0003494683],"category_scores_gemma":[0.00305475,0.0002656828,0.0005089743,0.0005932582,0.0006359963,0.0007885093,0.0006813607,0.0006859612,0.0002032802],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001601104,"about_ca_system_score_gemma":0.0002259007,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002153628,"about_ca_topic_score_gemma":0.0003840685,"domain_scores_codex":[0.9983253,0.0006715272,0.00008885674,0.0003100524,0.0005109746,0.00009316468],"domain_scores_gemma":[0.9981964,0.00109001,0.0002397812,0.0001280061,0.0002786408,0.00006707967],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003550868,0.0001632169,0.008508364,0.0001665277,0.00007234919,0.00004548061,0.00007390686,0.001670194,0.9309121,0.0004052824,0.00008940752,0.05753805],"study_design_scores_gemma":[0.00003171551,0.001466083,0.04524134,0.00003159307,0.0001268468,0.001142291,0.0002958643,0.06317013,0.8858485,0.001260349,0.001278181,0.0001071502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7921281,0.001819078,0.2044094,0.0002506561,0.00006139951,0.00009431617,0.0001404544,0.000290848,0.0008057737],"genre_scores_gemma":[0.7939433,0.001489255,0.2036085,0.00009569333,0.0000382144,0.00007317831,0.0002028782,0.00003686001,0.0005120503],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002674295,"threshold_uncertainty_score":0.01414323,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2536451207","doi":"10.1364/boe.7.004621","title":"Long-range, wide-field swept-source optical coherence tomography with GPU accelerated digital lock-in Doppler vibrography for real-time, in vivo middle ear diagnostics","year":2016,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Coherence Tomography Applications","field":"Engineering","cited_by":59,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Optical coherence tomography; Optics; Middle ear; Doppler effect; Tomography; Computer science; Physics; Medicine","authors":[{"name":"Dan MacDougall","is_ca":true},{"name":"Joshua Farrell","is_ca":true},{"name":"Jeremy Brown","is_ca":true},{"name":"Manohar Bance","is_ca":true},{"name":"Robert B. A. Adamson","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01311607129218139,"gpt":0.2265154903724078,"spread":0.2133994190802264,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000408463,0.0002981096,0.0001826546,0.0002687494,0.0001361709,0.000476851,0.0004455358,0.0003488628,0.001117787],"category_scores_gemma":[0.0009275576,0.0001932434,0.0001432134,0.0001744297,0.0002488521,0.000379992,0.0004221379,0.0003743669,0.0002847215],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002563914,"about_ca_system_score_gemma":0.0004741053,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006112634,"about_ca_topic_score_gemma":0.002025757,"domain_scores_codex":[0.9997501,0.00006428343,0.0000129736,0.0000316699,0.0001235397,0.00001739707],"domain_scores_gemma":[0.9996367,0.0001647235,0.00005041898,0.00004398692,0.00007270145,0.00003156617],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002645263,0.00007678306,0.002447841,0.00009648332,0.00002479116,0.0002089144,0.0001115871,0.004554191,0.9120861,0.0008706858,0.0007349569,0.07852314],"study_design_scores_gemma":[0.0001588665,0.001300038,0.009663964,0.00005008466,0.00007346972,0.001910452,0.00008402268,0.3234786,0.6479324,0.001126825,0.01413648,0.00008483705],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.202678,0.0006937707,0.7933947,0.0004123343,0.00006988394,0.0001528551,0.0001296938,0.001201993,0.001266763],"genre_scores_gemma":[0.4122291,0.000272303,0.5861338,0.0001653472,0.00002308561,0.0001315811,0.00008461231,0.0001008428,0.0008593525],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.001117787,"threshold_uncertainty_score":0.003739417,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2312123650","doi":"10.1364/boe.6.003765","title":"Review of fluorescence guided surgery visualization and overlay techniques","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; Canadian Institutes of Health Research; Dartmouth College","keywords":"Visualization; Computer science; Transparency (behavior); Perception; Overlay; Computer vision; Orientation (vector space); Focus (optics); Artificial intelligence; Human–computer interaction; Optics; Physics; Psychology","authors":[{"name":"Jonathan T. Elliott","is_ca":false},{"name":"Alisha V. DSouza","is_ca":false},{"name":"Scott C. Davis","is_ca":false},{"name":"Jonathan D. Olson","is_ca":false},{"name":"Keith D. Paulsen","is_ca":false},{"name":"David W. Roberts","is_ca":false},{"name":"Brian W. Pogue","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04565349787062862,"gpt":0.3715509173601474,"spread":0.3258974194895188,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097661,0.0008029707,0.001086569,0.003877284,0.0004580849,0.001145564,0.001470426,0.00142041,0.005950928],"category_scores_gemma":[0.00220423,0.0005483938,0.0008442091,0.003008212,0.0007136508,0.001724791,0.0006747873,0.001612909,0.003670662],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008600816,"about_ca_system_score_gemma":0.001223609,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002220914,"about_ca_topic_score_gemma":0.002656331,"domain_scores_codex":[0.9993522,0.0001152094,0.0001019844,0.0001172752,0.0002748817,0.00003849128],"domain_scores_gemma":[0.9985631,0.0007638219,0.0001390499,0.00005659929,0.0004121935,0.00006522115],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007849158,0.00004109181,0.000235173,0.01326769,0.00007461941,0.000394132,0.00007676243,0.0006067033,0.003499567,0.003040372,0.03900965,0.9396758],"study_design_scores_gemma":[0.000008927211,0.0001214002,0.001424773,0.0045538,0.000107571,0.005934766,0.00006286102,0.0004580358,0.002188294,0.001690233,0.9833931,0.00005619226],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002810148,0.9933361,0.002959245,0.0003966324,0.0005955448,0.00001230404,0.00003859444,0.00005120472,0.002329345],"genre_scores_gemma":[0.002109281,0.9896061,0.004410407,0.0005441055,0.0007923913,0.0000276015,0.0001021585,0.00002612769,0.002381747],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.005950928,"threshold_uncertainty_score":0.01990783,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2068420890","doi":"10.1364/boe.5.000233","title":"Imaging and modeling collagen architecture from the nano to micro scale","year":2013,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa; Institut National de la Recherche Scientifique","funders":"Versus Arthritis; Arthritis Research UK; National Institute for Health and Care Research; Cancer Research UK","keywords":"Cartilage; Materials science; Extracellular matrix; Biomedical engineering; Microscopy; Ligament; Collagen fibril; Nanotechnology; Optics; Anatomy; Chemistry; Medicine","authors":[{"name":"Cameron Brown","is_ca":false},{"name":"Marie‐Andrée Houle","is_ca":true},{"name":"Konstantin Popov","is_ca":true},{"name":"Mischa Nicklaus","is_ca":true},{"name":"Charles‐André Couture","is_ca":true},{"name":"Matthieu Laliberté","is_ca":true},{"name":"Thomas Brabec","is_ca":true},{"name":"Andreas Ruëdiger","is_ca":true},{"name":"Andrew Carr","is_ca":false},{"name":"Andrew Price","is_ca":false},{"name":"H.S. Gill","is_ca":false},{"name":"Lora Ramunno","is_ca":true},{"name":"François Légaré","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01099161625343106,"gpt":0.2385547161592463,"spread":0.2275630999058153,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008890025,0.0001708995,0.0000896748,0.0001567081,0.00009543548,0.0002863101,0.0001627404,0.0003516332,0.0004068218],"category_scores_gemma":[0.0001927265,0.0001469235,0.000143374,0.0001117939,0.0002046688,0.0002873314,0.0001347745,0.0001894681,0.0001421671],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003123066,"about_ca_system_score_gemma":0.0003408476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002970791,"about_ca_topic_score_gemma":0.005292162,"domain_scores_codex":[0.9999652,0.000004637096,0.000001321335,0.00000821039,0.00001681451,0.000003831865],"domain_scores_gemma":[0.9999465,0.00002473393,0.000008937712,0.000008540778,0.000007754355,0.000003521902],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.00002892682,0.00003768978,0.001543487,0.00007347827,0.000009922045,0.0001266676,0.00008146733,0.4563319,0.5180118,0.006061252,0.0003549091,0.01733848],"study_design_scores_gemma":[0.000003107298,0.00001609759,0.0008423538,0.000002978029,0.00000277546,0.00006631359,0.00001512887,0.9691039,0.02762378,0.001068045,0.001249657,0.000005891467],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3500619,0.0005935784,0.6412399,0.0003052737,0.0000319216,0.00004922914,0.0003011104,0.0003881812,0.007028897],"genre_scores_gemma":[0.7609996,0.0006486935,0.2355694,0.00004469608,0.00001209049,0.00006487922,0.0001267467,0.00005759091,0.002476327],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.002970791,"threshold_uncertainty_score":0.005906999,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3036782889","doi":"10.1364/boe.395279","title":"Real-time retinal layer segmentation of OCT volumes with GPU accelerated inferencing using a compressed, low-latency neural network","year":2020,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Retinal Imaging and Analysis","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Eye Institute; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC; Research to Prevent Blindness","keywords":"Computer science; Optical coherence tomography; Artificial intelligence; Artificial neural network; Segmentation; Computer vision; Wavefront; Optics","authors":[{"name":"Svetlana Borkovkina","is_ca":true},{"name":"Acner Camino","is_ca":false},{"name":"Worawee Janpongsri","is_ca":true},{"name":"Marinko V. Šarunic","is_ca":true},{"name":"Yifan Jian","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04088598449413583,"gpt":0.2991106168544779,"spread":0.2582246323603421,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002740191,0.000374032,0.0001718117,0.0002785978,0.0001989079,0.0004445979,0.0005369344,0.0002816587,0.001472002],"category_scores_gemma":[0.00118413,0.0001780629,0.0001619831,0.0002471633,0.000274635,0.0005660623,0.0004281266,0.0005110513,0.0001867576],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006641814,"about_ca_system_score_gemma":0.0007970573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00600054,"about_ca_topic_score_gemma":0.008752666,"domain_scores_codex":[0.9998726,0.00001914615,0.000006551844,0.00002993832,0.00005861411,0.00001308793],"domain_scores_gemma":[0.9997579,0.0000984748,0.00002962316,0.00004527584,0.00005418519,0.00001444524],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008653719,0.0001932228,0.003444185,0.0001438561,0.00006466892,0.0002964668,0.0003372348,0.3169226,0.2739366,0.007495873,0.003179225,0.3931207],"study_design_scores_gemma":[0.000008590842,0.00004266179,0.0006475723,0.000003001084,0.000005425406,0.00003915516,0.00001084094,0.9716547,0.02621451,0.000705475,0.0006598982,0.000008080947],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.2490428,0.0001378985,0.7424232,0.0002899944,0.00005439194,0.00008840985,0.0002678044,0.004758717,0.002936848],"genre_scores_gemma":[0.6268099,0.00005918464,0.3710304,0.0000678618,0.0000155159,0.00006674875,0.0002710942,0.0002200009,0.001459214],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.00600054,"threshold_uncertainty_score":0.01193124,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2231879110","doi":"10.1364/boe.6.003907","title":"Development of a combined broadband near-infrared and diffusion correlation system for monitoring cerebral blood flow and oxidative metabolism in preterm infants","year":2015,"lang":"en","type":"article","venue":"Biomedical Optics Express","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto Metropolitan University; London Health Sciences Centre; Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research; Children's Health Research Institute; Heart and Stroke Foundation of Canada","keywords":"Cerebral blood flow; Oxidative metabolism; Medicine; Blood flow; Oxygenation; Near-infrared spectroscopy; Population; Oxygen saturation; Cardiology; Ductus arteriosus; Anesthesia; Internal medicine; Oxygen; Metabolism; Chemistry; Biology; Neuroscience","authors":[{"name":"Mamadou Diop","is_ca":true},{"name":"Jessica Kishimoto","is_ca":true},{"name":"Vladislav Toronov","is_ca":true},{"name":"David S.C. Lee","is_ca":true},{"name":"Keith St. Lawrence","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01886742248687845,"gpt":0.2869642115657572,"spread":0.2680967890788787,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009479875,0.0003972792,0.0006014833,0.0004030946,0.0002123315,0.0003206805,0.0005019127,0.0005855025,0.0007673319],"category_scores_gemma":[0.0008884658,0.0002906155,0.0002218616,0.0002955956,0.0001775315,0.0004841489,0.0004974078,0.0005585423,0.0002244187],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002545337,"about_ca_system_score_gemma":0.0005548119,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000642154,"about_ca_topic_score_gemma":0.001328709,"domain_scores_codex":[0.9995363,0.0001343983,0.00002488982,0.0001347639,0.0001431428,0.00002663624],"domain_scores_gemma":[0.9996027,0.0001275262,0.00006930975,0.0000323008,0.0001251295,0.00004296704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004655301,0.0001301685,0.003841382,0.0001198067,0.00003021489,0.00008372647,0.00004239678,0.0003496018,0.9602952,0.0001142931,0.0001827351,0.03434487],"study_design_scores_gemma":[0.0001466581,0.004459496,0.0472048,0.00006516284,0.0003218925,0.002666614,0.0001100768,0.03923337,0.9014257,0.000209917,0.004043031,0.0001132562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7956773,0.002563479,0.1980883,0.0003293938,0.0001269058,0.0003430878,0.0003723858,0.0008974259,0.001601732],"genre_scores_gemma":[0.7044898,0.001511415,0.2913591,0.0003354835,0.0000819248,0.0004674629,0.0002158829,0.0000581669,0.001480715],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009479875,"threshold_uncertainty_score":0.005013466,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}