{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":13,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":13,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"9197f318bdbb","filters":{"venue":"Brain Research Protocols"}},"results":[{"id":"W2020463662","doi":"10.1016/s1385-299x(00)00007-6","title":"Methods to induce primary and secondary traumatic damage in organotypic hippocampal slice cultures","year":2000,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":100,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Toronto Western Hospital","funders":"","keywords":"Hippocampal formation; Neurotoxicity; Glutamate receptor; Neuroscience; Propidium iodide; Slice preparation; Excitotoxicity; NMDA receptor; Chemistry; Biology; Programmed cell death; Central nervous system; Apoptosis; Biochemistry; Toxicity; Receptor","retraction":null,"screen_n_in":null,"score":{"opus":0.216420410050254,"gpt":0.5450459891777532,"spread":0.3286255791274991,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.005787739,0.0002630988,0.0003720942,0.0007538396,0.0005824923,0.0003577264,0.001346715,0.0001516232,0.002025322],"category_scores_gemma":[0.003588211,0.0002276028,0.00004684395,0.003016782,0.0008785406,0.0005831035,0.0005709174,0.002014512,0.0004373899],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001081424,"about_ca_system_score_gemma":0.0004989645,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002957859,"about_ca_topic_score_gemma":0.00002004572,"domain_scores_codex":[0.9891324,0.006541775,0.0004540808,0.001280271,0.001163222,0.001428273],"domain_scores_gemma":[0.9951513,0.003557036,0.00004176994,0.0005964864,0.00008670313,0.0005667028],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003273504,0.0002984177,0.0001586292,0.000157563,0.000001272329,0.0002841163,0.0008770765,0.000005221351,0.899178,0.0002145947,0.004904923,0.09359279],"study_design_scores_gemma":[0.001981765,0.001235718,0.02868933,0.0001673738,0.000001309895,0.0001022846,0.0001592837,0.0001857891,0.8329371,0.001264348,0.1329096,0.0003660463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"protocol","genre_scores_codex":[0.8898149,0.0000117135,0.00001485989,0.004580217,0.00002754551,0.09365525,0.00001287832,0.0000932532,0.01178945],"genre_scores_gemma":[0.2801771,0.0001103642,0.005007512,0.04188029,0.0004103714,0.6338174,0.000003160493,0.0002522906,0.03834149],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.6096377,"threshold_uncertainty_score":0.9988869,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2049571136","doi":"10.1016/s1385-299x(01)00119-2","title":"High stability of mRNAs postmortem and protocols for their assessment by RT-PCR","year":2001,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":96,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Medical Research Council Canada; Alzheimer Society","keywords":"Autolysis (biology); Housekeeping gene; Messenger RNA; Molecular biology; RNA; Biology; Gene expression; Gene; Cyclophilin; Polymerase chain reaction; Real-time polymerase chain reaction; Enzyme; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.09838138483771086,"gpt":0.4788520976410103,"spread":0.3804707128032994,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002098652,0.0001630807,0.0002233987,0.00004931705,0.0001751533,0.00003745255,0.0003871183,0.0002350583,0.00003903139],"category_scores_gemma":[0.0002631718,0.0001348746,0.0000837495,0.0001579548,0.0003734902,0.000004864384,0.0002755043,0.0001968688,7.807022e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002493235,"about_ca_system_score_gemma":0.0002045202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003595502,"about_ca_topic_score_gemma":0.00001601986,"domain_scores_codex":[0.9981171,0.0003470136,0.0003377437,0.0005504329,0.0002206706,0.0004270636],"domain_scores_gemma":[0.9985076,0.0001160189,0.0001106118,0.0007272922,0.0004108128,0.000127705],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002517104,0.0003208174,0.003105192,0.000134681,0.00002845211,6.431902e-7,0.00001086806,2.819076e-7,0.9675649,0.002654082,0.01795539,0.007972931],"study_design_scores_gemma":[0.0007851426,0.001723672,0.001321312,0.0000467681,0.000001365823,0.000005402988,0.00003428667,0.00002351634,0.5647536,0.001905351,0.4292775,0.0001221089],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"protocol","genre_gemma":"protocol","genre_scores_codex":[0.1346825,0.00004263683,0.02970631,0.003657005,0.000004902125,0.8303141,0.0004546671,0.00004317404,0.00109464],"genre_scores_gemma":[0.09084214,0.0000137152,0.007489552,0.0001619672,0.00006114004,0.9008561,0.0002183266,0.00002694852,0.000330103],"genre_candidate":"protocol","genre_consensus":"protocol","teacher_disagreement_score":0.4113221,"threshold_uncertainty_score":0.5500029,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1992811273","doi":"10.1016/s1385-299x(02)00180-0","title":"An in vitro model of neurotrauma in organotypic spinal cord cultures from adult mice","year":2002,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Spinal Cord Injury Research","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto Western Hospital; University Health Network; University of Toronto","funders":"","keywords":"Luxol fast blue stain; Neurite; Neuroprotection; Propidium iodide; Spinal cord injury; Spinal cord; Pathology; Cresyl violet; Cell biology; Programmed cell death; Biology; Neuroscience; Staining; Chemistry; In vitro; Myelin; Medicine; Central nervous system; Apoptosis; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.2979541933538004,"gpt":0.5326535312263597,"spread":0.2346993378725594,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001800441,0.0002379646,0.0005478346,0.0009601589,0.00007770936,0.00006428887,0.0007876721,0.0002358934,0.0005634492],"category_scores_gemma":[0.003082196,0.000211511,0.00008233681,0.00167751,0.00037809,0.0002799856,0.0002085241,0.001823197,0.0001146615],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002575153,"about_ca_system_score_gemma":0.0003159117,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001375105,"about_ca_topic_score_gemma":0.0003506129,"domain_scores_codex":[0.9947289,0.0009782583,0.0006755799,0.0007494675,0.00183427,0.001033532],"domain_scores_gemma":[0.9975186,0.0003073803,0.00008129526,0.0009205185,0.0007902274,0.0003819569],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.03663925,0.001583649,0.004803996,0.0003959221,0.00001157856,0.0002327635,0.0002538614,0.00002532581,0.923472,0.0001752138,0.002214018,0.03019239],"study_design_scores_gemma":[0.01664253,0.0409924,0.08895613,0.003360475,0.000008154055,0.00003959569,0.0009097275,0.1261118,0.7161415,0.00348403,0.002691084,0.0006626309],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8619167,0.00004389651,0.00005310759,0.003206735,0.000007854802,0.1327337,0.00004686512,0.00004676086,0.001944384],"genre_scores_gemma":[0.8540257,0.00001162258,0.003251737,0.0004202521,0.000129724,0.1412826,0.00002199019,0.00006381874,0.0007926028],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2073306,"threshold_uncertainty_score":0.8625168,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2075606347","doi":"10.1016/s1385-299x(01)00049-6","title":"A focal embolic model of cerebral ischemia in rats: introduction and evaluation","year":2001,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Acute Ischemic Stroke Management","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Alberta Hospital Edmonton; University of Alberta Hospital","funders":"","keywords":"Medicine; Embolization; Ischemia; Middle cerebral artery; Infarction; Thromboembolic stroke; Cerebral infarction; Stroke (engine); Cardiology; Embolic stroke; Anesthesia; Internal medicine; Ischemic stroke; Radiology; Myocardial infarction","retraction":null,"screen_n_in":null,"score":{"opus":0.1696591407731666,"gpt":0.4819531508762322,"spread":0.3122940101030656,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004202004,0.0001085334,0.0002431305,0.0004130169,0.00004223536,0.00002044201,0.000117166,0.0001006784,0.0001787686],"category_scores_gemma":[0.001543968,0.00009859416,0.0000336056,0.0005627065,0.0001849605,0.0001404874,0.0001864774,0.0004137283,0.00001060853],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002321896,"about_ca_system_score_gemma":0.000273163,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004114156,"about_ca_topic_score_gemma":0.00001216351,"domain_scores_codex":[0.9975277,0.000251898,0.0003380931,0.0003844303,0.001112841,0.0003850259],"domain_scores_gemma":[0.9989482,0.0001055714,0.00006034163,0.0004085549,0.0003693997,0.0001078906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.002833508,0.000812043,0.02100319,0.00108226,0.00008645742,0.00002688213,0.001107957,0.0005507785,0.5673342,0.001687259,0.294562,0.1089135],"study_design_scores_gemma":[0.02171316,0.002389657,0.02832165,0.001590529,0.00005409976,0.0001069983,0.001566896,0.643202,0.1704951,0.004298689,0.1257665,0.0004947556],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7221553,0.00003550856,0.0008477648,0.01924106,0.00001061925,0.2395269,0.000003827135,0.00003677066,0.0181422],"genre_scores_gemma":[0.5567498,0.00001162655,0.004666935,0.0002784192,0.0005749094,0.4327512,0.00003462717,0.00004238081,0.004890116],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6426512,"threshold_uncertainty_score":0.4020553,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2006957980","doi":"10.1016/s1385-299x(01)00062-9","title":"A specific and sensitive method for visualization of tumor necrosis factor in the murine central nervous system","year":2001,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":40,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"McGill University","keywords":"Tumor necrosis factor alpha; Immunohistochemistry; In situ hybridization; Messenger RNA; Pathology; Hippocampal formation; Biology; Northern blot; Western blot; Central nervous system; Ischemia; Microglia; Necrosis; Medicine; Immunology; Neuroscience; Inflammation; Internal medicine; Gene; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.2115977995584871,"gpt":0.4641923996921385,"spread":0.2525946001336515,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001842676,0.0001157311,0.0001740322,0.0002509868,0.0002219842,0.0001583732,0.0002270211,0.00003833797,0.00001563711],"category_scores_gemma":[0.001544919,0.00008695034,0.00004279043,0.0007225535,0.00008633194,0.0001537318,0.00006493294,0.0001680356,0.000004906746],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004155953,"about_ca_system_score_gemma":0.00006375967,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001188337,"about_ca_topic_score_gemma":0.00001033306,"domain_scores_codex":[0.9958754,0.002327988,0.0003547833,0.0004124973,0.0006302221,0.0003991447],"domain_scores_gemma":[0.9974538,0.001930087,0.0001125349,0.0002603955,0.0001640153,0.00007912884],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000237435,0.00007490212,0.0000398502,0.0001583114,7.401011e-7,0.00004180998,0.0006696021,0.00003732607,0.9467574,0.04983427,0.0003989294,0.001749454],"study_design_scores_gemma":[0.001018666,0.0004051653,0.001697358,0.0001000347,6.271424e-7,0.00007750349,0.0002333487,0.0139529,0.9749903,0.0003448757,0.007091308,0.00008791617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5033298,0.000003128004,0.1032373,0.003834918,0.0000775299,0.3884007,0.0001202717,0.0001515525,0.0008448399],"genre_scores_gemma":[0.8079087,0.000009357759,0.002868166,0.001019369,0.0001983249,0.1873171,0.000007973614,0.0000593858,0.0006116217],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.304579,"threshold_uncertainty_score":0.3545732,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2016730776","doi":"10.1016/s1385-299x(99)00056-2","title":"Using intracranial electrical stimulation to study the timing of prepulse inhibition of the startle reflex","year":2000,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Neuroscience; Prepulse inhibition; Inferior colliculus; Moro reflex; Pedunculopontine Tegmental Nucleus; Startle response; Reflex; Psychology; Pedunculopontine nucleus; Inhibitory postsynaptic potential; Stimulation; Acoustic Startle Reflex; Superior colliculus; Sensory gating; Gating; Medicine; Nucleus; Internal medicine; Deep brain stimulation","retraction":null,"screen_n_in":null,"score":{"opus":0.409502475738256,"gpt":0.5594447284027592,"spread":0.1499422526645031,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00338668,0.000109779,0.0001652832,0.00021673,0.0006692883,0.00006719068,0.0008406094,0.00004866573,0.000404565],"category_scores_gemma":[0.003510764,0.0000667796,0.00005998793,0.002576796,0.0005852198,0.0001964564,0.0003466968,0.0006769795,0.00002406085],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005616803,"about_ca_system_score_gemma":0.0002737537,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003187633,"about_ca_topic_score_gemma":0.000003937908,"domain_scores_codex":[0.9929425,0.003873691,0.0004091071,0.0004872672,0.001721881,0.0005655585],"domain_scores_gemma":[0.9973835,0.001683016,0.00008501141,0.0005473405,0.0001996114,0.0001015109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007131604,0.0006742449,0.0008240046,0.00001645372,0.000001918105,0.00002176982,0.0005447773,0.000485465,0.9858198,0.00003750048,0.0002584636,0.01060251],"study_design_scores_gemma":[0.0008216192,0.001686824,0.008382547,0.00004445072,0.000002662711,0.00001211742,0.0000412557,0.005823344,0.9823479,0.0002916081,0.0004798553,0.00006583574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.898991,6.400401e-7,0.00001392031,0.0008027366,0.00001484962,0.09982428,0.000006641903,0.00001477504,0.0003311073],"genre_scores_gemma":[0.9760324,9.063201e-7,0.00003407301,0.0003417408,0.00005840125,0.02315877,6.815796e-8,0.00001675389,0.0003568698],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07704137,"threshold_uncertainty_score":0.5147692,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2024879225","doi":"10.1016/s1385-299x(02)00139-3","title":"Recording and marking with silicon multichannel electrodes","year":2002,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Neuroscience and Neural Engineering","field":"Neuroscience","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"London Health Sciences Centre; Western University; Algoma University","funders":"","keywords":"Preamplifier; Biomedical engineering; Silicon; Electrode; Electrophysiology; Materials science; Neuroscience; Optoelectronics; Chemistry; Medicine; Psychology","retraction":null,"screen_n_in":null,"score":{"opus":0.267290051945471,"gpt":0.4253858604190336,"spread":0.1580958084735626,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007707166,0.0001429356,0.0001377616,0.0002530981,0.0004556555,0.0002677196,0.0003347497,0.0000423392,0.00006240009],"category_scores_gemma":[0.002240872,0.0001121838,0.00002120394,0.0008243361,0.0002963882,0.0004164043,0.0001507152,0.0005050041,0.00003508843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003341782,"about_ca_system_score_gemma":0.00001743124,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009059066,"about_ca_topic_score_gemma":0.000003096301,"domain_scores_codex":[0.9975078,0.0002918,0.0001475195,0.0006152849,0.0006292873,0.000808377],"domain_scores_gemma":[0.9984044,0.00107239,0.00003224337,0.0002710393,0.00004163817,0.0001783264],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004084326,0.00004056484,0.0001472313,0.00005620965,6.282562e-7,0.00007749376,0.0001034895,0.00001392663,0.9848141,0.0006627481,0.0005398114,0.01350296],"study_design_scores_gemma":[0.0006285604,0.0008764486,0.000219392,0.0002305913,5.344734e-7,0.0001125549,0.00002958643,0.02168765,0.9566482,0.0002504276,0.01911142,0.0002046883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8512409,0.00002987973,0.0002746507,0.006135594,0.00004461364,0.1351687,0.000004435458,0.0004251166,0.006676073],"genre_scores_gemma":[0.912577,0.00002156183,0.0001983575,0.0005098379,0.00009179045,0.08406615,9.690463e-8,0.00004083963,0.002494407],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06133608,"threshold_uncertainty_score":0.4574723,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2025292362","doi":"10.1016/j.brainresprot.2005.10.004","title":"A procedure for selecting and culturing subpopulations of neurons from rat dorsal root ganglia using magnetic beads","year":2005,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":26,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Dorsum; Magnetic bead; Biology; Anatomy; Root (linguistics); Neuroscience; Chemistry; Chromatography; Philosophy","retraction":null,"screen_n_in":null,"score":{"opus":0.2506354576837561,"gpt":0.4728967126930809,"spread":0.2222612550093248,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007621171,0.0001558565,0.0002032636,0.000173004,0.0006029541,0.0001274772,0.0002926329,0.00007965719,0.00003814396],"category_scores_gemma":[0.003730508,0.0001453212,0.00005868811,0.0004877917,0.0002249002,0.0003155945,0.0001640653,0.0003870373,0.00000412198],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007075169,"about_ca_system_score_gemma":0.0001704833,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006724075,"about_ca_topic_score_gemma":0.00007469408,"domain_scores_codex":[0.9975206,0.0003670749,0.0003645165,0.0005713336,0.000577144,0.0005992888],"domain_scores_gemma":[0.9978956,0.001483044,0.0001131355,0.0002159841,0.0001714918,0.0001207452],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001490969,0.00008448626,0.002311129,0.0001252544,0.000001890842,0.000004491666,0.0003721142,0.000415297,0.9927649,0.0004089941,0.0002831841,0.003079084],"study_design_scores_gemma":[0.00123307,0.0005796764,0.00236498,0.0004815592,0.000005827157,0.00001502106,0.0001090012,0.02013031,0.9663904,0.001511082,0.006953627,0.0002254202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9270562,0.00004379592,0.0006244283,0.0009686268,0.00001318706,0.07106386,0.00002935797,0.00005822745,0.0001423412],"genre_scores_gemma":[0.943116,0.000001270936,0.002471752,0.0002252926,0.0002506704,0.053603,0.000002460533,0.00004495212,0.000284616],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02637455,"threshold_uncertainty_score":0.5926027,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2101658849","doi":"10.1016/j.brainresprot.2004.01.002","title":"The use of proliferating cell nuclear antigen immunohistochemistry with a unique functional marker to detect postnatal neurogenesis in paraffin-embedded sections of the mature pig brain","year":2004,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Neurogenesis; Proliferating cell nuclear antigen; Biology; Immunohistochemistry; Proliferation Marker; Cell biology; Neuron; Monoclonal antibody; Pathology; Antibody; Neuroscience; Immunology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.1073611691987058,"gpt":0.3575045594781761,"spread":0.2501433902794703,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001035016,0.0002251084,0.0002299299,0.0001767154,0.000701109,0.0001569996,0.0007614389,0.0001075985,0.00002491726],"category_scores_gemma":[0.003940958,0.0001440256,0.0001139882,0.001546968,0.0003823728,0.0001495792,0.0004397334,0.0007299556,0.0000079665],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008255088,"about_ca_system_score_gemma":0.0005532149,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004121885,"about_ca_topic_score_gemma":0.00003631963,"domain_scores_codex":[0.9958752,0.001343664,0.0004659777,0.0005944169,0.001130102,0.0005905929],"domain_scores_gemma":[0.9964942,0.002141139,0.0001948247,0.0007888356,0.000254383,0.0001266042],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001146052,0.0001858896,0.00008766529,0.0001011556,0.000004785043,0.00004707506,0.0001589293,0.003218744,0.9939905,0.0004860327,0.0004823404,0.00009077354],"study_design_scores_gemma":[0.0008246073,0.0006347087,0.003477123,0.000229035,0.000001872836,0.0001166876,0.0000590622,0.0002206354,0.9918324,0.00005722753,0.002411126,0.0001354725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9496529,0.000002663726,0.0001571786,0.001312059,0.00002767282,0.04868195,0.00004760046,0.00003636035,0.00008166725],"genre_scores_gemma":[0.9575601,0.000003589307,0.0006445837,0.0007911178,0.00003907974,0.04044772,0.000001046573,0.00008929646,0.0004234858],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008234228,"threshold_uncertainty_score":0.5873193,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2025904818","doi":"10.1016/j.brainresprot.2003.08.002","title":"Definition of a new maze paradigm for the study of spatial behavior in rats","year":2003,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Memory and Neural Mechanisms","field":"Neuroscience","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Institut National de la Santé et de la Recherche Médicale; Institut national de la recherche scientifique","keywords":"Psychology; Scopolamine; Task (project management); Water maze; Cognitive psychology; Morris water navigation task; Neuroscience; Representation (politics); Artificial intelligence; Computer science; Cognition; Hippocampus; Medicine; Pharmacology","retraction":null,"screen_n_in":null,"score":{"opus":0.5995078733965302,"gpt":0.5318447954718708,"spread":0.06766307792465942,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00232465,0.00008888239,0.0001771174,0.000155336,0.0001026945,0.00002662876,0.000395642,0.00004987978,0.000099289],"category_scores_gemma":[0.004440524,0.00006266689,0.00004682352,0.0004737968,0.0001059737,0.00008745516,0.00006147112,0.0002508014,0.000006111336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001857901,"about_ca_system_score_gemma":0.0001861128,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007301381,"about_ca_topic_score_gemma":0.0001603529,"domain_scores_codex":[0.9970527,0.001309456,0.0003453325,0.0003053704,0.0006462854,0.0003408746],"domain_scores_gemma":[0.9969139,0.00246786,0.00009851022,0.0003921023,0.00005764599,0.00006996193],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007751692,0.001465546,0.0004477295,0.00009327856,0.000001757528,0.00001933808,0.000845451,0.000004217904,0.9657185,0.02530082,0.0002446379,0.005083547],"study_design_scores_gemma":[0.002207781,0.003968513,0.001979413,0.00006799598,0.00000215948,0.000004151612,0.0002501061,0.00003091754,0.9669201,0.0237553,0.0007491159,0.00006448236],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6434016,0.000001970536,0.0003010998,0.0002815114,0.00002457171,0.3555739,0.00001085552,0.00001000178,0.0003944871],"genre_scores_gemma":[0.6605005,5.438912e-7,0.0001506325,0.00004419891,0.00001675092,0.3391219,2.503508e-7,0.000009927907,0.0001552833],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01709898,"threshold_uncertainty_score":0.5316043,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994587188","doi":"10.1016/s1385-299x(03)00020-5","title":"Organotypic slices in vitro: repeated, same-cell, high-resolution tracking of nuclear and cytoplasmic fluorescent signals in live, transfected cerebellar neurons by confocal microscopy","year":2003,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Cytoplasm; Confocal; Confocal microscopy; Fluorescence microscope; Fluorescence; In vitro; Transfection; Cell biology; Biology; Biophysics; Chemistry; Cell culture; Physics; Optics; Biochemistry; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.07393849723431732,"gpt":0.3953591283172513,"spread":0.321420631082934,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002753396,0.0003025199,0.0004874207,0.000896513,0.0003697384,0.000186789,0.0007889596,0.000217539,0.0001857696],"category_scores_gemma":[0.002895803,0.0002988144,0.00006222335,0.002279699,0.001374677,0.000415164,0.0001920132,0.00164196,0.00004612123],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001314267,"about_ca_system_score_gemma":0.0004141663,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002044704,"about_ca_topic_score_gemma":0.00003212734,"domain_scores_codex":[0.9900892,0.005352691,0.0007207374,0.001278079,0.001126186,0.001433077],"domain_scores_gemma":[0.9967044,0.00229433,0.0001216355,0.0004360271,0.0001448348,0.0002987873],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00124477,0.0008957498,0.00102025,0.0002319763,0.000001671692,0.0002448728,0.0003901115,0.00002960872,0.9945986,0.0001332837,0.0007591032,0.0004499632],"study_design_scores_gemma":[0.003579546,0.001157319,0.001286375,0.000155635,0.000001923012,0.00003286135,0.00009824068,0.0007977095,0.9894009,0.000109848,0.003151807,0.0002278923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9504415,0.00003363168,0.000008382803,0.0008599869,0.00003169517,0.04839041,0.00005132916,0.00004952767,0.000133525],"genre_scores_gemma":[0.985834,0.0001433364,0.00006425016,0.0006071734,0.00001384076,0.01308835,0.0000016659,0.00006454129,0.00018281],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03539252,"threshold_uncertainty_score":0.9999464,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2084267930","doi":"10.1016/s1385-299x(00)00050-7","title":"Comparative computations of spike synchronization in visual cortex of cats","year":2001,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Neural dynamics and brain function","field":"Neuroscience","cited_by":7,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Correlogram; Synchronization (alternating current); Visual cortex; Electrophysiology; CATS; Spike (software development); Pattern recognition (psychology); Measure (data warehouse); Perception; Computer science; Contrast (vision); Collar; Neuroscience; Mathematics; Artificial intelligence; Psychology; Data mining; Channel (broadcasting)","retraction":null,"screen_n_in":null,"score":{"opus":0.2202774356588877,"gpt":0.5062027511159679,"spread":0.2859253154570802,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008391913,0.00008786291,0.0002239333,0.000392593,0.00009831315,0.00002835795,0.0002274576,0.0000542519,0.00007742925],"category_scores_gemma":[0.001034487,0.00008199335,0.0000357708,0.001597955,0.000329297,0.0001719218,0.00009878505,0.0002454237,0.00001768505],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007033035,"about_ca_system_score_gemma":0.0001710974,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008976335,"about_ca_topic_score_gemma":0.0001221338,"domain_scores_codex":[0.997694,0.0006830937,0.0003901853,0.0002992915,0.0006432465,0.0002902472],"domain_scores_gemma":[0.9982063,0.001131876,0.0001390608,0.0001771589,0.0002849423,0.00006065188],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0003352316,0.0009635878,0.008087967,0.0002021436,0.000003893699,0.0000256403,0.000605247,0.002746629,0.9699702,0.009041307,0.0007636115,0.007254518],"study_design_scores_gemma":[0.004100712,0.004095303,0.2033966,0.001041669,0.000002753379,0.00003325158,0.0004890061,0.439533,0.3335088,0.007703112,0.005696404,0.0003993316],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8908316,0.000003491735,0.003266625,0.0006810159,0.0000300605,0.1016522,0.00002412414,0.00003197298,0.003478894],"genre_scores_gemma":[0.9757565,0.000002517938,0.0001030245,0.00005718659,0.00002157316,0.02372596,0.00000816055,0.000009923216,0.0003151374],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6364614,"threshold_uncertainty_score":0.3343592,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2027960232","doi":"10.1016/s1385-299x(00)00052-0","title":"Cervical lymph cannulation to investigate the efflux and effects of intracerebroventricular cytokine infusions","year":2001,"lang":"en","type":"article","venue":"Brain Research Protocols","topic":"Cerebrospinal fluid and hydrocephalus","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada Research Chairs; University of New Brunswick; University of Toronto","funders":"","keywords":"Lymph; Medicine; Lymphatic system; Cervical lymph nodes; Tumor necrosis factor alpha; Cytokine; Cerebrospinal fluid; Pathology; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.07651319372067283,"gpt":0.4040316120078993,"spread":0.3275184182872264,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001266315,0.0001498122,0.0002056344,0.000243089,0.0004291664,0.0001244022,0.0004752718,0.00008657931,0.00008233297],"category_scores_gemma":[0.008070338,0.000102755,0.00004933305,0.001491051,0.000400135,0.0001410847,0.000509561,0.0003319569,0.00006620271],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007834278,"about_ca_system_score_gemma":0.0001656189,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002274306,"about_ca_topic_score_gemma":0.00002851144,"domain_scores_codex":[0.9969115,0.0008075383,0.0002983441,0.0004477201,0.0009679928,0.00056693],"domain_scores_gemma":[0.9970389,0.001950758,0.00005626044,0.00044548,0.0001611857,0.0003474205],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001900623,0.000193948,0.007608192,0.0003585636,0.000005370971,0.00005639741,0.0004500582,0.0001111191,0.9698637,0.009030117,0.003510026,0.008622461],"study_design_scores_gemma":[0.002888468,0.001622742,0.2276732,0.0009598524,0.000007497081,0.0001427586,0.00005043775,0.004676854,0.6115201,0.007047099,0.1430627,0.000348232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.886837,0.00001382525,0.0001317475,0.009256077,0.00002252633,0.1028052,0.000008002271,0.00004801839,0.0008775896],"genre_scores_gemma":[0.8986604,0.00001433376,0.000102124,0.001931443,0.0001676326,0.09824941,0.000001646995,0.00002803115,0.0008449923],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3583436,"threshold_uncertainty_score":0.9661531,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}