{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":291,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":291,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"6b68c4240241","filters":{"venue":"Cancer Cell"}},"results":[{"id":"W2145489645","doi":"10.1016/j.ccr.2012.08.024","title":"Hotspot Mutations in H3F3A and IDH1 Define Distinct Epigenetic and Biological Subgroups of Glioblastoma","year":2012,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1864,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; SickKids Foundation; University of Toronto; Hospital for Sick Children; McGill University and Génome Québec Innovation Centre; Montreal Children's Hospital; McGill University Health Centre","funders":"Stichting Kinderen Kankervrij; Deutsche Krebshilfe; Bundesministerium für Bildung und Forschung; Brain Tumour Charity; Institute of Cancer Research; Deutsches Krebsforschungszentrum; Warren H. and Clara Cole Foundation; Genome Canada","keywords":"Glioblastoma; Epigenetics; IDH1; Biology; Epigenesis; Genetics; Cancer research; Isocitrate dehydrogenase; Gene; DNA methylation; Computational biology; Mutation; Gene expression; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.02284098826195404,"gpt":0.2769246861980719,"spread":0.2540836979361178,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000486515,0.00008024841,0.0001766644,0.00003911716,0.00001848349,0.00000301252,0.00001530912,0.00004232176,0.0001208381],"category_scores_gemma":[0.00001526977,0.00005794243,0.00001996723,0.00008633927,0.00008043263,0.00002403939,0.00001985563,0.00003665727,0.000002946017],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003789268,"about_ca_system_score_gemma":0.0000145828,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002993735,"about_ca_topic_score_gemma":0.0003276138,"domain_scores_codex":[0.9995385,0.00001610942,0.0001269953,0.0001181175,0.00005059929,0.0001496816],"domain_scores_gemma":[0.9996919,0.00006912794,0.00003737763,0.00007837492,0.00001793773,0.0001053024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000506725,0.0002993727,0.9860497,0.0000514503,0.00001254097,0.00001234101,0.0002737522,0.000001797196,0.009330424,0.0001036388,0.00003323185,0.003781123],"study_design_scores_gemma":[0.001331852,0.0002779006,0.9743657,0.00004252412,0.00006030501,0.00001387853,0.00009729403,0.00002113824,0.02335934,0.00006113495,0.0003112106,0.00005778133],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9765467,0.02261238,0.000008084472,0.000129485,0.00004433729,0.0001675965,0.00002024907,0.000006710742,0.0004644829],"genre_scores_gemma":[0.9983985,0.001261596,0.0001721209,0.00004146121,0.00003860168,0.00005820575,0.000008477069,0.00000648552,0.00001448771],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02185189,"threshold_uncertainty_score":0.2362824,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2595863515","doi":"10.1016/j.ccell.2017.02.009","title":"The Microenvironmental Landscape of Brain Tumors","year":2017,"lang":"en","type":"review","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1861,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"Université de Lausanne; National Cancer Institute; Ludwig Institute for Cancer Research; Cancer Research UK; Breast Cancer Research Foundation","keywords":"Tumor microenvironment; Neuroscience; Brain cancer; Regulator; Blood–brain barrier; Immune system; Biology; Cancer; Computational biology; Medicine; Cancer research; Central nervous system; Immunology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.05030366800788162,"gpt":0.3510771499178586,"spread":0.300773481909977,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007122726,0.0002084435,0.0008732695,0.00002127492,0.00009645947,0.00001577924,0.0001752404,0.00008467477,0.0003035503],"category_scores_gemma":[0.000008934348,0.0001098686,0.0004012429,0.00002430519,0.00009188314,0.00001346718,0.0000565988,0.0001108305,0.00006684696],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001584555,"about_ca_system_score_gemma":0.0001605781,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009770739,"about_ca_topic_score_gemma":0.0000337008,"domain_scores_codex":[0.9992055,0.0000271322,0.0002640235,0.0002043828,0.0001280672,0.0001709208],"domain_scores_gemma":[0.9988906,0.0001020791,0.0003565764,0.0005683498,0.000008990805,0.00007336892],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000006507273,0.0001298368,0.0003234141,0.004738675,0.0002097822,0.00006558737,0.00001995403,8.24481e-8,0.000006756747,0.000006165165,0.02678875,0.9677045],"study_design_scores_gemma":[0.0004447634,0.00006422281,0.0001259469,0.004913408,0.0009153386,0.00002513073,0.00001476368,3.134313e-7,0.0001151496,0.000001188403,0.9932917,0.00008810557],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001096512,0.9928944,7.693625e-8,0.0001438217,0.0001877607,0.0005678621,0.00009905172,0.000005323844,0.005992129],"genre_scores_gemma":[0.0002324903,0.9963096,0.00001074228,0.00003982094,0.0001590491,0.0002211431,0.00006391184,0.00003318087,0.00293011],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9676164,"threshold_uncertainty_score":0.4480311,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1967600348","doi":"10.1016/j.ccr.2009.01.021","title":"Accelerated Metastasis after Short-Term Treatment with a Potent Inhibitor of Tumor Angiogenesis","year":2009,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1701,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Health Sciences Centre; Sunnybrook Health Science Centre","funders":"Terry Fox Foundation; Canada Research Chairs; National Cancer Institute; Ontario Institute for Cancer Research; Pfizer; Cancer Research Institute","keywords":"Angiogenesis; Angiogenesis inhibitor; Cancer research; Metastasis; Term (time); Medicine; Cancer; Biology; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.018253979953689,"gpt":0.263846053507314,"spread":0.2455920735536251,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003319222,0.0002234358,0.00023554,0.00002780144,0.00003499075,0.00001357339,0.0001055809,0.0000694949,0.0001588934],"category_scores_gemma":[7.844823e-7,0.0001625795,0.0001877997,0.0001017326,0.00004489359,0.000005208456,0.00002170569,0.00001895661,0.000002483541],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007673291,"about_ca_system_score_gemma":0.0001370266,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009103505,"about_ca_topic_score_gemma":0.0001194557,"domain_scores_codex":[0.9990541,0.00002296339,0.0001959301,0.000361714,0.0001198348,0.00024549],"domain_scores_gemma":[0.9994013,0.000002507785,0.00007327023,0.0003174881,0.0001088507,0.00009656811],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007527735,0.0003020584,0.01673463,0.00002680678,0.0002142475,0.00002398057,0.00006516503,0.00007919442,0.9480689,0.000001741958,0.000714182,0.03301628],"study_design_scores_gemma":[0.0006075546,0.001335268,0.01366468,0.00002426563,0.0001756444,0.000005784027,0.00004061403,0.000006793011,0.9723626,0.000001096291,0.01154602,0.0002296261],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9763884,0.02234758,0.0001393801,0.00005279242,0.00007490871,0.000220252,0.0001263767,0.000009719404,0.0006406082],"genre_scores_gemma":[0.9961972,0.002152809,0.0003928096,0.0002837645,0.0002502192,0.0001388761,0.00005127104,0.00002615092,0.0005068923],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03278665,"threshold_uncertainty_score":0.66298,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1995068068","doi":"10.1016/j.ccr.2014.01.021","title":"Mutant p53 in Cancer: New Functions and Therapeutic Opportunities","year":2014,"lang":"en","type":"review","venue":"Cancer Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":1555,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Cancer Research UK; Wellcome Trust; Royal Society; Cancer Research Society","keywords":"Mutant; Cancer; Cancer research; Cancer cell; Biology; Computational biology; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.1272996133643841,"gpt":0.3470221038256088,"spread":0.2197224904612247,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001254368,0.0004891895,0.00167826,0.0002131188,0.00005328301,0.0000267202,0.0001306865,0.0004191218,0.001161427],"category_scores_gemma":[0.000009302,0.0004174306,0.0002962709,0.0002774208,0.0000996679,0.00003331084,0.00005741019,0.0006671482,0.0000356987],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001034719,"about_ca_system_score_gemma":0.003438013,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00326219,"about_ca_topic_score_gemma":0.001892379,"domain_scores_codex":[0.9981597,0.0000895838,0.0005567012,0.0005573459,0.0002285527,0.0004080833],"domain_scores_gemma":[0.9987595,0.00006425067,0.0002762608,0.0005164418,0.0000564533,0.0003271086],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001716544,0.00003262938,0.000007445374,0.01050371,0.0001696238,0.00005883171,0.0001080461,0.000005323103,0.00002247328,0.000035208,0.003793799,0.9852458],"study_design_scores_gemma":[0.0008785054,0.00011989,0.000004423449,0.01410427,0.002152376,0.00007070937,0.00007295592,0.00001821724,0.00002214225,0.00001506468,0.9821617,0.0003797356],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00002725967,0.9883831,0.00005853631,0.000230626,0.001112167,0.00104566,0.0001170432,0.00006777187,0.008957813],"genre_scores_gemma":[0.00007469496,0.98321,0.00001626921,0.0005087895,0.0006865672,0.0004606846,0.00008683762,0.0001356602,0.01482045],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.984866,"threshold_uncertainty_score":0.9998277,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2151260260","doi":"10.1016/j.ccr.2006.10.020","title":"A Mitochondria-K+ Channel Axis Is Suppressed in Cancer and Its Normalization Promotes Apoptosis and Inhibits Cancer Growth","year":2007,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1517,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa; Ontario Genomics; University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; Canada Foundation for Innovation","keywords":"Apoptosis; Cancer cell; Mitochondrion; Cell biology; Cancer research; Glycolysis; Anaerobic glycolysis; Biology; Inner mitochondrial membrane; Chemistry; Cancer; Biochemistry; Metabolism; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01377146611521973,"gpt":0.2608087542654196,"spread":0.2470372881501998,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001042052,0.0001914427,0.0001825849,0.00006535516,0.00006826253,0.00002039773,0.00007394304,0.0002430624,0.0001919457],"category_scores_gemma":[0.00002481976,0.0001884783,0.00003214156,0.000147869,0.00004880386,0.00001514686,0.000071327,0.00009569147,0.000001917704],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004012743,"about_ca_system_score_gemma":0.00008083368,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001311126,"about_ca_topic_score_gemma":0.003499508,"domain_scores_codex":[0.9988613,0.00003422669,0.0002226071,0.0004785116,0.00009107464,0.0003122744],"domain_scores_gemma":[0.9995222,0.00001233028,0.00009015291,0.0001266712,0.0001268463,0.0001217844],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002012648,0.00004321187,0.007864457,0.0001427947,0.00001984499,0.000001555084,0.0007400152,0.0000192938,0.9872068,0.00001776192,0.00275979,0.0009832605],"study_design_scores_gemma":[0.001159341,0.0001184778,0.001649094,0.00004896159,0.00002565814,0.000003419967,0.00008018808,0.0001362842,0.9879152,0.00002003565,0.008602098,0.0002412937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9800015,0.01720403,0.0004194434,0.0004308534,0.0007813332,0.0004052302,0.00011043,0.0000125082,0.0006346705],"genre_scores_gemma":[0.9807468,0.01519462,0.00008996965,0.001207684,0.0005675657,0.0002071234,0.00005280538,0.00003154813,0.001901892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006215362,"threshold_uncertainty_score":0.7685924,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2626440326","doi":"10.1016/j.ccell.2017.05.005","title":"Intertumoral Heterogeneity within Medulloblastoma Subgroups","year":2017,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1255,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Montreal Children's Hospital; McMaster University; Ontario Institute for Cancer Research; University of Toronto; SickKids Foundation; University of Calgary; McGill University; Hamilton General Hospital; Hospital for Sick Children","funders":"University of Toronto; National Cancer Institute; National Institutes of Health; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; Cancer Research Society; Terry Fox Research Institute; Magyar Tudományos Akadémia; Brain Tumour Foundation of Canada; Swifty Foundation; Canadian Institutes of Health Research; Pediatric Brain Tumor Foundation","keywords":"Medulloblastoma; Biology; PTCH1; Sonic hedgehog; Computational biology; Homogeneous; DNA methylation; Genome; Genetics; Bioinformatics; Cancer research; Gene; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.03092978934182136,"gpt":0.3151606758383367,"spread":0.2842308864965153,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005186074,0.0001347111,0.0002178158,0.00001935145,0.0001599594,0.00005397003,0.0001413726,0.00004800338,0.000359132],"category_scores_gemma":[0.00001458724,0.0001031049,0.0001038317,0.00001730097,0.00007857814,0.00008915855,0.00006993994,0.00007505727,0.00009988357],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001662013,"about_ca_system_score_gemma":0.00005736418,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009964375,"about_ca_topic_score_gemma":0.00162891,"domain_scores_codex":[0.9992765,0.00001055197,0.0001370326,0.0002408489,0.0001384963,0.0001965328],"domain_scores_gemma":[0.9990621,0.000009541723,0.0001219829,0.0005856648,0.00004752599,0.0001732014],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002613516,0.0006926719,0.9598469,0.0001350836,0.0001725111,0.0006607629,0.0004212114,0.00001233439,0.02393408,0.0001556346,0.006767794,0.006939655],"study_design_scores_gemma":[0.003354154,0.000370292,0.356227,0.0001758297,0.0001966106,0.00004796379,0.00007724529,0.0002503905,0.6322164,0.0000439197,0.006844293,0.0001958858],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9893845,0.001413073,0.000007590083,0.0008711056,0.0006180296,0.000196063,0.00001478528,0.00003581731,0.007459086],"genre_scores_gemma":[0.9984055,0.0001439773,0.0002079114,0.0004142615,0.0001957053,0.00008947753,0.000007077453,0.00002040448,0.0005156533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6082823,"threshold_uncertainty_score":0.4204496,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2751187578","doi":"10.1016/j.ccell.2017.08.017","title":"Integrated Molecular Meta-Analysis of 1,000 Pediatric High-Grade and Diffuse Intrinsic Pontine Glioma","year":2017,"lang":"en","type":"review","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1254,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Hospital for Sick Children","funders":"Niilo Helanderin Säätiö; National Institute of Neurological Disorders and Stroke; CHILDREN with CANCER UK; Brain Tumour Charity; Rosetrees Trust; National Cancer Institute; National Institutes of Health; CRIS Cancer Foundation; Cancer Research UK; Kortney Rose Foundation; Pediatric Brain Tumor Foundation; Cure Starts Now Foundation; McKenna Claire Foundation","keywords":"Glioma; Histone; Biology; Histone H3; Mutant; Cancer research; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.09901359544554209,"gpt":0.3572283461719115,"spread":0.2582147507263695,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001468143,0.0006301678,0.006427643,0.0008391989,0.00005540515,0.00004550891,0.000240772,0.000296529,0.0009634615],"category_scores_gemma":[0.00004230185,0.0003921759,0.002722311,0.001010303,0.00008021328,0.00004454128,0.0001057869,0.0002458996,0.00001226042],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001841621,"about_ca_system_score_gemma":0.000236732,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002131349,"about_ca_topic_score_gemma":0.0001408426,"domain_scores_codex":[0.99777,0.0001187749,0.0007939963,0.0006796759,0.0003373493,0.0003002606],"domain_scores_gemma":[0.9973163,0.0001242034,0.0009943558,0.001148995,0.000170338,0.0002457983],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.00004645212,0.002549318,0.0006652079,0.02500628,0.5441836,0.002448492,0.00007948319,0.000004895109,0.00006182772,0.0001057252,0.002801989,0.4220468],"study_design_scores_gemma":[0.0008817887,0.00009925401,0.0001307366,0.0002207325,0.6938627,0.00001271407,0.000003236726,0.000002512081,0.0001831622,0.000002995842,0.3043675,0.0002326622],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.005765512,0.9921386,0.000004052372,0.00006894659,0.0001299134,0.0008727318,0.0007214286,0.00002548612,0.0002733126],"genre_scores_gemma":[0.008349667,0.9897655,0.0001531796,0.00003452826,0.0001083018,0.0004415306,0.0005928258,0.0000704515,0.0004840583],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.4218141,"threshold_uncertainty_score":0.9999498,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2055986128","doi":"10.1016/j.ccr.2014.07.028","title":"Gene Body Methylation Can Alter Gene Expression and Is a Therapeutic Target in Cancer","year":2014,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1246,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"National Institutes of Health; National Cancer Institute; Princess Margaret Cancer Foundation","keywords":"DNA methylation; Methylation; Biology; Gene; Promoter; Gene expression; Epigenetics; Carcinogenesis; Regulation of gene expression; Epigenetics of physical exercise; RNA-Directed DNA Methylation; Demethylation; Cancer research; Genetics; Molecular biology","retraction":null,"screen_n_in":null,"score":{"opus":0.01302609287177919,"gpt":0.278225427895976,"spread":0.2651993350241968,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001470804,0.0001336586,0.0001238688,0.00002961944,0.0000467718,0.00001786538,0.00007521299,0.000130035,0.00008819519],"category_scores_gemma":[0.000006005758,0.000123699,0.00003286562,0.00005271712,0.00002743946,0.000004513333,0.00004491835,0.00005952027,0.000001178203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003642028,"about_ca_system_score_gemma":0.00005214358,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005715423,"about_ca_topic_score_gemma":0.0003526376,"domain_scores_codex":[0.9991433,0.00007356785,0.0001612577,0.0003394706,0.00009284064,0.0001895551],"domain_scores_gemma":[0.999586,0.000009060773,0.00007755599,0.0002113916,0.00004838555,0.00006759664],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002299013,0.00001936042,0.01496731,0.00001724898,0.000008270625,2.187259e-7,0.0001663344,0.0003827223,0.9780706,0.000002704686,0.00008303527,0.006259241],"study_design_scores_gemma":[0.0005114288,0.00007609715,0.007028714,0.00001097326,0.0000126368,1.70114e-7,0.0000117729,0.0008918825,0.975576,0.0002736489,0.01544314,0.0001634677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9634891,0.03144374,0.004007997,0.0001879644,0.0001769846,0.0001576925,0.00002908521,0.000005550288,0.0005018822],"genre_scores_gemma":[0.9904317,0.007109377,0.001038248,0.0005415129,0.0002862778,0.00007483707,0.00005986294,0.0000244745,0.0004337234],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02694258,"threshold_uncertainty_score":0.50443,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1949037014","doi":"10.1016/j.ccell.2015.04.002","title":"Molecular Classification of Ependymal Tumors across All CNS Compartments, Histopathological Grades, and Age Groups","year":2015,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1237,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Center for Advancing Translational Sciences; Deutschen Konsortium für Translationale Krebsforschung; Heidelberger Zentrum für Personalisierte Onkologie Deutsches Krebsforschungszentrum In Der Helmholtz-Gemeinschaft; Clinical and Translational Science Institute, University of Pittsburgh; National Cancer Institute; National Institutes of Health; Making Headway Foundation","keywords":"Ependymal Cell; Pathology; Biology; Medicine; Immunohistochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.08015180889394903,"gpt":0.3378405521211816,"spread":0.2576887432272326,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008841792,0.0001114117,0.0002541335,0.00001699252,0.00002167372,0.000008491636,0.00004637218,0.00005285725,0.00002890561],"category_scores_gemma":[0.000009578354,0.00008718652,0.00004832499,0.0000514661,0.0001001643,0.00003220905,0.00003246421,0.00006032387,0.000007310356],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001889838,"about_ca_system_score_gemma":0.00003545165,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001766411,"about_ca_topic_score_gemma":0.00004288775,"domain_scores_codex":[0.9992309,0.00002906987,0.0001755085,0.0002247913,0.0001669323,0.0001727474],"domain_scores_gemma":[0.9994789,0.00001302956,0.00008581407,0.0001880413,0.00005037587,0.0001837903],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005391777,0.004002747,0.6671498,0.0003523527,0.000192122,0.00436811,0.00482683,0.00009815127,0.2979672,0.003505587,0.01055715,0.006440751],"study_design_scores_gemma":[0.007048455,0.000975032,0.8685944,0.00009625535,0.0003270513,0.0001124952,0.0009286681,0.0002715476,0.1029495,0.0002653298,0.01817248,0.0002587877],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917777,0.005861272,0.00002738306,0.0003369267,0.00008816429,0.0002557825,0.00003101347,0.00001965326,0.001602122],"genre_scores_gemma":[0.9990696,0.0001788032,0.0002845633,0.0002030699,0.00003015652,0.00007770423,0.00007471456,0.00001114992,0.00007027976],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2014446,"threshold_uncertainty_score":0.3555363,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3016044607","doi":"10.1016/j.ccell.2020.03.015","title":"A Probabilistic Classification Tool for Genetic Subtypes of Diffuse Large B Cell Lymphoma with Therapeutic Implications","year":2020,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":1145,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"National Cancer Institute; National Institutes of Health; Terry Fox Research Institute; AbbVie; Genentech; Celgene; Janssen Biotech; Roche","keywords":"Diffuse large B-cell lymphoma; Lymphoma; Computational biology; Cancer research; Probabilistic logic; Biology; Computer science; Immunology; Artificial intelligence","retraction":null,"screen_n_in":null,"score":{"opus":0.03299643181904677,"gpt":0.2739337415544668,"spread":0.24093730973542,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002220959,0.000122324,0.0002074125,0.00001504907,0.00004587957,0.000009397127,0.00006611831,0.0000441728,0.00005215893],"category_scores_gemma":[0.00000748093,0.00008793116,0.00007044608,0.0001147216,0.000035729,0.00002692904,0.00001010037,0.00001754917,0.000009416146],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001760217,"about_ca_system_score_gemma":0.0002714768,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003837,"about_ca_topic_score_gemma":0.00002706957,"domain_scores_codex":[0.9992721,0.00001244343,0.0001873168,0.0002632181,0.00009730658,0.0001675774],"domain_scores_gemma":[0.9993384,0.00006523821,0.0001131524,0.0002607739,0.0001279765,0.00009444803],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002290266,0.02246295,0.7718288,0.004502185,0.0005623309,0.00001377795,0.00435506,0.00008536472,0.109777,0.004985694,0.004830789,0.07430568],"study_design_scores_gemma":[0.02084067,0.001373616,0.9027336,0.00007103371,0.001029514,0.000004462576,0.0001933299,0.001994059,0.0549642,0.0001469507,0.01641533,0.0002332698],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9903938,0.003619757,0.001365715,0.00203596,0.00003075983,0.001508884,0.0001559535,0.00003976296,0.0008493642],"genre_scores_gemma":[0.9963353,0.000409429,0.001018921,0.0007950256,0.00007260799,0.001136958,0.00005150464,0.00002578254,0.000154533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1309047,"threshold_uncertainty_score":0.3585728,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1996311090","doi":"10.1016/j.ccell.2014.11.019","title":"Glutathione and Thioredoxin Antioxidant Pathways Synergize to Drive Cancer Initiation and Progression","year":2015,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":986,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Thioredoxin; Glutathione; Antioxidant; Cancer; Cancer research; Signal transduction; Cancer cell; Biology; Cell biology; Oxidative stress; Immunology; Biochemistry; Genetics; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.02038148357163233,"gpt":0.296546811684684,"spread":0.2761653281130517,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001047231,0.0001292797,0.0001206197,0.00001953072,0.00006675752,0.00001688961,0.00006519093,0.0001382136,0.00001158104],"category_scores_gemma":[0.00002479219,0.0001059003,0.00001791188,0.00004926141,0.00009376289,0.000008539219,0.0001101947,0.00006158201,0.000002324643],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002344284,"about_ca_system_score_gemma":0.00009569497,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001001266,"about_ca_topic_score_gemma":0.0002483828,"domain_scores_codex":[0.9992498,0.00005756667,0.0001139661,0.0003344735,0.00007220383,0.0001720625],"domain_scores_gemma":[0.9995404,0.000007094386,0.00006543451,0.0001244974,0.0001032095,0.0001593298],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001669656,0.000027727,0.01571928,0.0000265694,0.00001966874,0.000004444106,0.0004985161,0.00002286135,0.9698245,0.00006553175,0.001738148,0.01188577],"study_design_scores_gemma":[0.001006182,0.0004869619,0.03099427,0.00007680061,0.00002662794,0.000006452778,0.000438073,0.00003671003,0.9455267,0.0001264691,0.02099852,0.0002762066],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9832897,0.01441771,0.0002579989,0.0002554968,0.0001973533,0.0002110559,0.00006365638,0.00001084807,0.001296248],"genre_scores_gemma":[0.9941982,0.004319088,0.0004270906,0.000459174,0.000203004,0.0001014236,0.00003857178,0.00001263121,0.0002407897],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02429779,"threshold_uncertainty_score":0.4318488,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2132463881","doi":"10.1016/s1535-6108(02)00104-6","title":"Mutations in a novel gene lead to kidney tumors, lung wall defects, and benign tumors of the hair follicle in patients with the Birt-Hogg-Dubé syndrome","year":2002,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":937,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"U.S. Public Health Service","keywords":"Birt–Hogg–Dubé syndrome; Hair follicle; Lung; Kidney; Cancer research; Gene; Folliculin; Biology; Pathology; Medicine; Internal medicine; Cell biology; Endocrinology; Genetics; Anatomy","retraction":null,"screen_n_in":null,"score":{"opus":0.01221200380529694,"gpt":0.2137049976492097,"spread":0.2014929938439127,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007566791,0.0001702808,0.0002725187,0.00009018589,0.00004987374,0.000009841681,0.0001205388,0.00003664523,0.00005588536],"category_scores_gemma":[0.00002131726,0.00009720281,0.00005015825,0.000478366,0.00007559083,0.00005339095,0.00004909453,0.0001378275,0.000005175528],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004735819,"about_ca_system_score_gemma":0.000133789,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00199475,"about_ca_topic_score_gemma":0.001317723,"domain_scores_codex":[0.9989215,0.00004073451,0.00023523,0.0002753312,0.0002675461,0.0002596913],"domain_scores_gemma":[0.9993223,0.0000479551,0.00009116703,0.0003434152,0.0000564963,0.0001386423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001459243,0.0005395359,0.9867567,0.0001676425,0.00003637265,0.00005269686,0.004051964,0.0006270182,0.006764508,0.00001448705,0.0005025694,0.0003405694],"study_design_scores_gemma":[0.004140292,0.0004604085,0.9726296,0.0003503514,0.0000911148,0.00001766262,0.000182844,0.0004416,0.0213912,0.000004197822,0.0001554199,0.0001352771],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959649,0.001112642,0.00001001972,0.000879572,0.00003786438,0.001169968,0.00004121184,0.00001060708,0.0007731497],"genre_scores_gemma":[0.9983336,0.00002639288,0.0001503387,0.0006816513,0.00001221415,0.0001627166,0.000009229001,0.00002981835,0.0005940002],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01462669,"threshold_uncertainty_score":0.3963816,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2745658163","doi":"10.1016/j.ccell.2017.07.003","title":"Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma","year":2017,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":919,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency","funders":"National Eye Institute; Castle Biosciences; National Human Genome Research Institute; National Cancer Institute; National Institutes of Health; Bayer","keywords":"Melanoma; Cancer research; Computational biology; Biology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.03322520309716398,"gpt":0.3858027387107481,"spread":0.3525775356135841,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001374042,0.00009286746,0.0003437066,0.00005271792,0.00007344505,0.00002063937,0.00007221632,0.0001096881,0.0001356342],"category_scores_gemma":[0.0000512166,0.00007065493,0.0001239076,0.00005344297,0.000152411,0.00006741217,0.00004335546,0.0001365765,0.00001596996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007295357,"about_ca_system_score_gemma":0.00006854838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001180233,"about_ca_topic_score_gemma":0.008440175,"domain_scores_codex":[0.9993469,0.00005485128,0.000168749,0.0002346157,0.00007182029,0.0001230237],"domain_scores_gemma":[0.9994423,0.00003698759,0.00009977878,0.00030139,0.00003903301,0.00008045244],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00009767879,0.000110407,0.9943585,0.00001189054,0.0007225937,0.000691727,0.0002040096,8.578229e-7,0.0002075889,0.0000171317,0.0001184581,0.003459205],"study_design_scores_gemma":[0.002114999,0.0001470882,0.9908974,0.00002754738,0.001447977,0.000003818285,0.0001176001,0.0001194158,0.004661396,0.0001301227,0.0002639023,0.00006872135],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9904614,0.001953587,0.00003960569,0.0004227085,0.0001631547,0.0001379666,0.000007910076,0.000006807603,0.006806862],"genre_scores_gemma":[0.9971605,0.0006268304,0.0001431755,0.0001455861,0.00003885535,0.00001847062,0.00001105951,0.000006381607,0.001849144],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007259942,"threshold_uncertainty_score":0.4709816,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2949498852","doi":"10.1016/j.ccell.2019.05.004","title":"Cooperation between Constitutive and Inducible Chemokines Enables T Cell Engraftment and Immune Attack in Solid Tumors","year":2019,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":910,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Genentech; Astellas Pharma; Eisai; Daiichi-Sankyo; University of Pennsylvania Health System; Neos Therapeutics; Sidney Kimmel Foundation; Ludwig Institute for Cancer Research; Amgen; Boehringer Ingelheim; Gilead Sciences; Roche; Novartis; Celgene; AstraZeneca; Bristol-Myers Squibb; National Cancer Institute; Takeda Pharmaceutical Company; AbbVie; Merck; GlaxoSmithKline","keywords":"Immune system; Chemokine; Immunology; Biology; Cancer research; Solid organ; Cell biology; Transplantation; Medicine; Organ transplantation","retraction":null,"screen_n_in":null,"score":{"opus":0.01359097591689867,"gpt":0.2570640990919131,"spread":0.2434731231750145,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001827601,0.0001915121,0.0003621304,0.00007412153,0.0001133914,0.00002574352,0.00009188632,0.0001768613,0.0005079331],"category_scores_gemma":[0.00000902812,0.0001708969,0.00002957491,0.00009170279,0.0002214788,0.0001717885,0.00006786286,0.0002057171,0.00006981893],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007365711,"about_ca_system_score_gemma":0.0001349775,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006751712,"about_ca_topic_score_gemma":0.00004004821,"domain_scores_codex":[0.9989904,0.0001206461,0.0002776958,0.0003024524,0.00002255489,0.000286218],"domain_scores_gemma":[0.9995475,0.0001181841,0.00009462953,0.000184907,0.00003937284,0.00001540196],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002761318,0.00006663218,0.02104169,0.000074157,0.00005629405,0.0000019222,0.001401153,0.00001960125,0.9738228,0.00006112106,0.000156812,0.003021649],"study_design_scores_gemma":[0.002813289,0.0002063394,0.02626159,0.00009588363,0.0000220825,0.000006671699,0.0006197173,0.000003584211,0.9475976,0.00001145656,0.02214127,0.0002205254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9258904,0.0704788,0.000005859864,0.0000781597,0.0002910605,0.0003974088,0.00002829508,0.00001952569,0.002810518],"genre_scores_gemma":[0.9884447,0.004684533,0.00001406058,0.0001073789,0.00001971035,0.00004328245,0.0000517821,0.00001500201,0.006619511],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06579427,"threshold_uncertainty_score":0.6968972,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2038329478","doi":"10.1016/s1535-6108(02)00180-0","title":"Expression of the ETV6-NTRK3 gene fusion as a primary event in human secretory breast carcinoma","year":2002,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":905,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children; University of British Columbia; BC Cancer Agency; Children's & Women's Health Centre of British Columbia","funders":"","keywords":"ETV6; Fusion gene; Cancer research; Gene; Breast carcinoma; Oncogene Proteins; Gene expression; Primary (astronomy); Carcinoma; Fusion protein; Medicine; Biology; Oncology; Immunology; Regulation of gene expression; Pathology; Breast cancer; Internal medicine; Chromosomal translocation; Genetics; Cancer; Recombinant DNA","retraction":null,"screen_n_in":null,"score":{"opus":0.006328674846545356,"gpt":0.2135448956497369,"spread":0.2072162208031915,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005000419,0.0001047463,0.0001056523,0.00001506273,0.00004761558,0.000003979898,0.0001916871,0.000118051,0.0001820788],"category_scores_gemma":[0.000001974501,0.0000819925,0.00008110354,0.0000460319,0.00004250203,0.00000256975,0.0001562962,0.00007680604,0.000002511214],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000597873,"about_ca_system_score_gemma":0.00004696093,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002768546,"about_ca_topic_score_gemma":0.0001635905,"domain_scores_codex":[0.999327,0.0000449135,0.0001629963,0.0002190432,0.00009388473,0.0001521845],"domain_scores_gemma":[0.9995046,0.000002480703,0.00008677966,0.0003374824,0.0000304658,0.00003816969],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001812381,0.00007913102,0.0067029,0.00004248172,0.000003117211,0.000001373302,0.0001297167,0.0000434327,0.9904289,0.000002579813,0.001780562,0.0007676783],"study_design_scores_gemma":[0.0005102911,0.00005215234,0.02041951,0.00004473314,0.00000943134,0.000007280865,0.00003596006,0.00004928003,0.97315,0.000007978783,0.005601082,0.0001123385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9904028,0.005935454,0.00002431581,0.00003831885,0.0001238611,0.0001645643,0.00003251726,0.000002866045,0.003275316],"genre_scores_gemma":[0.9966602,0.0009267054,0.00003134973,0.0002581624,0.0001059754,0.00002452924,0.00003484319,0.00001584421,0.00194237],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01727894,"threshold_uncertainty_score":0.3343557,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2010991736","doi":"10.1016/j.ccr.2014.07.014","title":"The Somatic Genomic Landscape of Chromophobe Renal Cell Carcinoma","year":2014,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":860,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency","funders":"U.S. National Library of Medicine; National Institute of General Medical Sciences; National Human Genome Research Institute; National Cancer Institute; National Institutes of Health; Korea Institute of Science and Technology; Korea Institute of Science and Technology Information; National Center for Advancing Translational Sciences; Frederick National Laboratory for Cancer Research","keywords":"Somatic cell; Chromophobe cell; Renal cell carcinoma; Biology; Cancer research; Carcinoma; Genetics; Medicine; Pathology; Clear cell; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.004509447402218532,"gpt":0.2006061130523305,"spread":0.196096665650112,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001120942,0.000117499,0.0001246339,0.00001021008,0.00008472913,0.00001893814,0.0002468555,0.00007299431,0.00005343981],"category_scores_gemma":[0.00001523039,0.00009262937,0.00008371275,0.00003536676,0.00006319491,0.000001625171,0.00009687582,0.00004998702,0.00001072326],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002648997,"about_ca_system_score_gemma":0.0001480495,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001607409,"about_ca_topic_score_gemma":0.0002766095,"domain_scores_codex":[0.999292,0.00002714243,0.0001887867,0.0002055412,0.0000759401,0.0002105483],"domain_scores_gemma":[0.9993063,0.00004028577,0.0001225834,0.0004109186,0.00005415755,0.00006572296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004399751,0.0000318765,0.004471403,0.00006203679,0.00001255939,5.88842e-7,0.00006906963,0.0003840768,0.9836893,0.0000597639,0.009449774,0.001725528],"study_design_scores_gemma":[0.0007177031,0.0002317048,0.005154377,0.000007152315,0.00003470422,0.000001623961,0.00006301769,0.0003999529,0.8404704,0.00007196002,0.1526802,0.0001672339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9713246,0.01413893,0.0001941779,0.00006105099,0.0003216228,0.0001138553,0.00003583207,0.000003663736,0.01380633],"genre_scores_gemma":[0.9953785,0.002849688,0.0001060075,0.0001635121,0.0004717939,0.00002733659,0.0000266574,0.00002312106,0.0009534011],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1432304,"threshold_uncertainty_score":0.3777316,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2093985232","doi":"10.1016/j.ccr.2013.06.014","title":"Hexokinase 2 Is Required for Tumor Initiation and Maintenance and Its Systemic Deletion Is Therapeutic in Mouse Models of Cancer","year":2013,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":859,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"U.S. Public Health Service; National Cancer Institute; National Institutes of Health; Center for Clinical and Translational Science, University of Illinois at Chicago; National Institute on Aging; Chicago Biomedical Consortium; University of Illinois at Chicago; U.S. Department of Veterans Affairs; Center for Clinical and Translational Sciences, University of Texas Health Science Center at Houston; U.S. Department of Defense","keywords":"Cancer; Cancer research; Biology; Hexokinase; Cancer cell; Medicine; Internal medicine; Genetics; Glycolysis; Metabolism","retraction":null,"screen_n_in":null,"score":{"opus":0.01900126540123294,"gpt":0.2579283753566396,"spread":0.2389271099554066,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007111586,0.0001211904,0.0001786016,0.00002794702,0.00002761433,0.00001270288,0.00005978991,0.00008572618,0.00002355787],"category_scores_gemma":[0.00000526746,0.0001150893,0.0000357647,0.00004347924,0.00003433298,0.00002039245,0.0000259888,0.0000360817,4.684848e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003856813,"about_ca_system_score_gemma":0.00008882429,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009642894,"about_ca_topic_score_gemma":0.0003210039,"domain_scores_codex":[0.9992549,0.00002056131,0.0001990582,0.0002800472,0.00006183982,0.0001835417],"domain_scores_gemma":[0.9995307,0.00000697533,0.0001244812,0.0001346588,0.000152296,0.00005093572],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009797822,0.00001938563,0.0003700435,0.0003348342,0.00001978286,9.955617e-8,0.0004631874,0.0001041008,0.9927892,0.00005358704,0.001216513,0.004531252],"study_design_scores_gemma":[0.002245778,0.0001114927,0.0007559204,0.0001267619,0.00005206898,0.000004178463,0.0002644207,0.007558341,0.9800515,0.0003545651,0.008214467,0.0002604871],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9093831,0.08902454,0.0004597625,0.0001262329,0.0001911577,0.0005556664,0.0001750922,0.000004045727,0.00008040004],"genre_scores_gemma":[0.9646206,0.03293088,0.00005701918,0.0008922622,0.0002064311,0.0004764786,0.000015126,0.00002040201,0.0007807237],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05609366,"threshold_uncertainty_score":0.4693206,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2150701651","doi":"10.1016/s1535-6108(03)00241-1","title":"VSV strains with defects in their ability to shutdown innate immunity are potent systemic anti-cancer agents","year":2003,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":848,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université du Québec à Montréal; McGill University; Terry Fox Research Institute; University of Ottawa; Ottawa Regional Cancer Foundation","funders":"Canadian Institutes of Health Research; Cancer Care Ontario","keywords":"Oncolytic virus; Vesicular stomatitis virus; Innate immune system; Lytic cycle; Ovarian cancer; Biology; Cancer; Interferon; Immunity; Cancer cell; Clearance; Cancer research; Immune system; Immunology; Vesicular Stomatitis; Virology; Virus; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.02368840543473547,"gpt":0.2937026590417071,"spread":0.2700142536069716,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003775383,0.0002373333,0.000242375,0.00004917469,0.0000795715,0.00002544448,0.0003105843,0.000131422,0.0001473666],"category_scores_gemma":[0.00002102556,0.0001954794,0.00006913132,0.0002365806,0.00007440354,0.000005581541,0.00007509794,0.0001969392,0.0000100491],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002537958,"about_ca_system_score_gemma":0.0003698797,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003980999,"about_ca_topic_score_gemma":0.004361222,"domain_scores_codex":[0.9983277,0.0002917986,0.0002055521,0.0005001361,0.0001875748,0.000487245],"domain_scores_gemma":[0.9989629,0.000007769946,0.00008267585,0.0006525686,0.0001273151,0.0001667749],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005210759,0.0001357519,0.04933688,0.0001460865,0.00004283309,0.000007072657,0.0002378473,0.004406401,0.943693,0.000001493247,0.0001990282,0.001272533],"study_design_scores_gemma":[0.001412267,0.0007202753,0.02194222,0.00009503969,0.000009299316,0.00000311276,0.0004492923,0.00002104621,0.9735671,0.000005797789,0.001469665,0.0003048385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939381,0.004210411,0.00004709054,0.00005969965,0.000109768,0.0006500394,0.0001248285,0.00001250704,0.0008475234],"genre_scores_gemma":[0.9976166,0.001257803,0.00002120793,0.00042672,0.00006015492,0.0002419377,0.00002139114,0.00004093547,0.0003131808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02987415,"threshold_uncertainty_score":0.7971419,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2098052125","doi":"10.1016/j.ccr.2013.10.006","title":"Reduced H3K27me3 and DNA Hypomethylation Are Major Drivers of Gene Expression in K27M Mutant Pediatric High-Grade Gliomas","year":2013,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":842,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"National Institute of Neurological Disorders and Stroke; National Institutes of Health; Deutsche Krebshilfe; McKenna Claire Foundation; Deutsches Krebsforschungszentrum; Alex's Lemonade Stand Foundation for Childhood Cancer; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; Bundesministerium für Bildung und Forschung; Cure Starts Now Foundation; St. Baldrick's Foundation","keywords":"Biology; Histone; Chromatin immunoprecipitation; Mutant; Epigenetics; Chromatin; EZH2; Methyltransferase; Histone H3; DNA methylation; PRC2; Gene; Genetics; Mutation; Gene expression; Methylation; Cell biology; Cancer research; Promoter","retraction":null,"screen_n_in":null,"score":{"opus":0.01245433326365663,"gpt":0.241097554619525,"spread":0.2286432213558683,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004543413,0.0001347255,0.0002693227,0.0001708889,0.00002762016,0.0000088166,0.00004135956,0.00008527468,0.0002790795],"category_scores_gemma":[0.00001442556,0.0001073011,0.00004414165,0.0002631024,0.00002763516,0.00009436745,0.0000234537,0.00006436597,0.00001070337],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001578824,"about_ca_system_score_gemma":0.00004545405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001233569,"about_ca_topic_score_gemma":0.00006231645,"domain_scores_codex":[0.99913,0.00002704505,0.0002279464,0.0002576528,0.0001778307,0.0001795687],"domain_scores_gemma":[0.999419,0.00004562664,0.0001532145,0.0001933098,0.00006537306,0.0001234884],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003171045,0.0002856508,0.1842236,0.0001212574,0.00001410217,0.00003845024,0.0003239034,0.00002467004,0.8132057,0.000002864368,0.0005718341,0.001156282],"study_design_scores_gemma":[0.002411482,0.00008853157,0.3725641,0.00005718661,0.0000810242,0.000001859724,0.0001287323,0.00003730428,0.62447,0.00004511237,0.00004116468,0.00007348194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920307,0.006739593,0.000004953672,0.0003661732,0.0001476242,0.0005202945,0.00001831391,0.00001781039,0.0001544817],"genre_scores_gemma":[0.9970617,0.001733982,0.0008181924,0.00004222973,0.0001107278,0.000140658,0.00001640858,0.0000174234,0.00005866249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1887357,"threshold_uncertainty_score":0.4375611,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2010711123","doi":"10.1016/j.ccr.2013.04.011","title":"EZH2 Is Required for Germinal Center Formation and Somatic EZH2 Mutations Promote Lymphoid Transformation","year":2013,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":841,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Cancer Agency","funders":"National Cancer Institute","keywords":"EZH2; Germinal center; Histone methyltransferase; Biology; Somatic cell; Somatic hypermutation; B cell; Chromatin; Cancer research; Gene silencing; Histone; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01273970078456645,"gpt":0.2634424101023659,"spread":0.2507027093177994,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006953368,0.0001030464,0.00008254419,0.00002337984,0.00009763244,0.00004515462,0.0000521886,0.00008958964,0.00006438193],"category_scores_gemma":[0.000007106671,0.00009921591,0.00004793976,0.00003365015,0.00002503404,0.00003564866,0.00001171295,0.00002083938,0.00001151801],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003169064,"about_ca_system_score_gemma":0.00003824093,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004544236,"about_ca_topic_score_gemma":0.00002706321,"domain_scores_codex":[0.9993815,0.00001704016,0.0002130271,0.0001595453,0.00007219285,0.0001566329],"domain_scores_gemma":[0.9996073,0.000006753276,0.00009151111,0.000120924,0.000115613,0.00005786452],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000185573,0.00003707318,0.0004161517,0.0002135218,0.00001173199,5.949428e-8,0.001054618,0.00003947459,0.9663092,0.00001744381,0.0006334884,0.03124862],"study_design_scores_gemma":[0.001070965,0.0001721793,0.0008632392,0.0000218392,0.00003013761,0.000002511379,0.0001784772,0.007553382,0.9690921,0.0007978551,0.02004886,0.0001683946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9646778,0.001710727,0.03100765,0.0003208885,0.000106582,0.0007495484,0.00006903189,0.00000987323,0.001347919],"genre_scores_gemma":[0.9960331,0.0008303532,0.001617463,0.000165922,0.0001074043,0.0003267225,0.0003630792,0.00001592332,0.000540062],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0313553,"threshold_uncertainty_score":0.4045908,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2143619463","doi":"10.1016/j.ccr.2005.09.001","title":"Radial glia cells are candidate stem cells of ependymoma","year":2005,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":824,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; Toronto Western Hospital; Hospital for Sick Children","funders":"National Cancer Institute; National Institutes of Health; Royal College of Physicians and Surgeons of Canada; American Lebanese Syrian Associated Charities; Sontag Foundation; V Foundation for Cancer Research","keywords":"Ependymoma; Biology; Progenitor cell; Phenotype; Stem cell; Cancer stem cell; Pathology; Cancer research; Neural stem cell; Cell biology; Gene; Medicine; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01354558294488839,"gpt":0.2513561187629923,"spread":0.2378105358181039,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004689328,0.0001712846,0.0003577872,0.00004718955,0.00003480079,0.000009444355,0.00008300132,0.00007725664,0.001369474],"category_scores_gemma":[8.279256e-7,0.0001405311,0.0001300659,0.00009913031,0.00004026792,0.00005284242,0.00002551577,0.00007819328,0.0001766204],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002580443,"about_ca_system_score_gemma":0.0001083593,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008018969,"about_ca_topic_score_gemma":0.0005243912,"domain_scores_codex":[0.9989992,0.00001888376,0.0002483574,0.0002580622,0.0002065612,0.0002689838],"domain_scores_gemma":[0.999233,0.00002958277,0.0001544882,0.0003207062,0.00006800953,0.0001942163],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006410026,0.002980851,0.05043776,0.0008627588,0.0004932814,0.001269686,0.001689202,0.001365537,0.6969045,0.00007737252,0.17387,0.069408],"study_design_scores_gemma":[0.002727866,0.0001447505,0.003135563,0.000103276,0.0001971117,0.00000800029,0.0001136213,0.0001270197,0.9295408,0.00000219018,0.06377476,0.000125062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9845404,0.008423431,0.00000487965,0.0004872849,0.0004909932,0.0003658251,0.0001522707,0.0000281599,0.005506776],"genre_scores_gemma":[0.9955722,0.001035271,0.0001915712,0.0003382149,0.0003708856,0.00005404574,0.000008379554,0.00002820958,0.002401191],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2326362,"threshold_uncertainty_score":0.9995434,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1964596167","doi":"10.1016/s1535-6108(02)00125-3","title":"β4 integrin-dependent formation of polarized three-dimensional architecture confers resistance to apoptosis in normal and malignant mammary epithelium","year":2002,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":794,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"National Cancer Institute; DOD Prostate Cancer Research Program; U.S. Department of Energy","keywords":"Epithelium; Integrin; Apoptosis; Cell biology; Cancer research; Biology; Cell; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01812050847794252,"gpt":0.2558724316017199,"spread":0.2377519231237774,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001850741,0.0001482768,0.0002860048,0.0001934419,0.00003273154,0.00001299488,0.000122443,0.00009135967,0.0005212915],"category_scores_gemma":[0.00003370871,0.0001250773,0.00005536587,0.0002088574,0.00005610583,0.00008404317,0.0001230118,0.0002746287,0.00001834114],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002064888,"about_ca_system_score_gemma":0.00007948766,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004856869,"about_ca_topic_score_gemma":0.001406797,"domain_scores_codex":[0.9986018,0.00005344333,0.0003230337,0.0002765069,0.0004452963,0.0002999315],"domain_scores_gemma":[0.9992679,0.00005756746,0.00007532498,0.0002787542,0.0001227082,0.0001977218],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009862237,0.000156987,0.003324544,0.0006019886,0.00001984062,0.00004623265,0.0009005844,0.0001091482,0.9847711,0.00007154069,0.001157666,0.007854178],"study_design_scores_gemma":[0.004366874,0.000353483,0.009597943,0.0006225525,0.00004072789,0.00002551067,0.0001591938,0.002435255,0.9775016,0.0001185288,0.004481983,0.0002963935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9839032,0.003860984,0.002898445,0.003412877,0.0000911055,0.000839684,0.0000421336,0.00002310466,0.004928521],"genre_scores_gemma":[0.9937116,0.0004275355,0.002213115,0.0005206158,0.00003526537,0.00005443668,0.00001106222,0.0000205518,0.003005834],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009808438,"threshold_uncertainty_score":0.5707777,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2585589460","doi":"10.1016/j.ccell.2017.01.001","title":"Comprehensive Molecular Characterization of Pheochromocytoma and Paraganglioma","year":2017,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Adrenal and Paraganglionic Tumors","field":"Medicine","cited_by":783,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; Canada's Michael Smith Genome Sciences Centre; University of Toronto; BC Cancer Agency","funders":"National Cancer Institute; National Human Genome Research Institute; National Institutes of Health; Bayer","keywords":"HRAS; Paraganglioma; Pheochromocytoma; Biology; Gene; Fusion gene; Germline; Cancer research; Wnt signaling pathway; Germline mutation; Proto-Oncogene Proteins c-ret; Mutation; Genetics; Endocrinology; Receptor; Medicine; Pathology; KRAS","retraction":null,"screen_n_in":null,"score":{"opus":0.01887896294726031,"gpt":0.2933977476765438,"spread":0.2745187847292834,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00001855784,0.00008063095,0.0001876936,0.0000199507,0.00006932501,0.00001141821,0.00006106777,0.00003978223,0.0001475642],"category_scores_gemma":[0.000006105854,0.0000693393,0.0000353537,0.00002557558,0.0001095102,0.00006728335,0.00003713247,0.00004642745,0.000006086547],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000165958,"about_ca_system_score_gemma":0.00004259456,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008350449,"about_ca_topic_score_gemma":0.000003309288,"domain_scores_codex":[0.9995555,0.000009091395,0.0001094463,0.0001334096,0.00009233603,0.0001001902],"domain_scores_gemma":[0.9994373,0.000006984262,0.0001441447,0.0002549984,0.00008350162,0.00007306808],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002378535,0.00007559175,0.003878004,0.0004711454,0.00005130208,0.003002991,0.0004209989,0.000002048644,0.9848041,0.0002292617,0.00007872837,0.006747982],"study_design_scores_gemma":[0.001230304,0.0001198028,0.2179889,0.0001179594,0.00006928164,0.000430183,0.00002610924,0.0001453895,0.7785988,0.00004536608,0.001132993,0.00009490563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949954,0.001097206,0.00008802991,0.0002032923,0.0001063591,0.0001427593,0.000019316,0.00001249689,0.003335197],"genre_scores_gemma":[0.9990044,0.00007839261,0.00005755643,0.0001860571,0.00007854193,0.000008892814,0.00001771983,0.00001093862,0.0005575325],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2141109,"threshold_uncertainty_score":0.2827575,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2084667421","doi":"10.1016/j.ccr.2014.02.004","title":"Genome Sequencing of SHH Medulloblastoma Predicts Genotype-Related Response to Smoothened Inhibition","year":2014,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":779,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre; University of Toronto; SickKids Foundation; Occupational Cancer Research Centre; Hospital for Sick Children","funders":"National Institute of Neurological Disorders and Stroke; National Cancer Institute; Bundesministerium für Bildung und Forschung; Brain Tumour Charity; Deutsche Krebshilfe; Roche; Novartis","keywords":"Smoothened; PTCH1; Sonic hedgehog; Medulloblastoma; GLI2; Hedgehog signaling pathway; Biology; Germline; Cancer research; Mutation; Germline mutation; Genetics; Patched; Signal transduction; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.00969108919426951,"gpt":0.2308241976960062,"spread":0.2211331085017367,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003586626,0.0001404753,0.0001692553,0.00004228597,0.00005618975,0.000005925401,0.0001135144,0.0001238766,0.00004944889],"category_scores_gemma":[0.0001205783,0.000140622,0.00006160108,0.0001065098,0.00006193238,0.000002725547,0.00009165411,0.00005427687,0.00001846139],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008936455,"about_ca_system_score_gemma":0.0001392075,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007590209,"about_ca_topic_score_gemma":0.0001002003,"domain_scores_codex":[0.9989802,0.0001213296,0.0002401458,0.0003085911,0.0001246008,0.0002251187],"domain_scores_gemma":[0.9993802,0.00002160657,0.00008381281,0.000288181,0.0001302882,0.00009594258],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003442763,0.00001437831,0.0001554193,0.00003678078,0.000031881,0.000001511253,0.0005663711,0.002279376,0.9961123,0.000006094176,0.0001360445,0.0003155395],"study_design_scores_gemma":[0.000534362,0.0004637965,0.002557671,0.00004298585,0.00002217583,0.000001658569,0.00009581818,0.0000684207,0.9857422,0.00002414676,0.01028118,0.0001656267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955441,0.001232591,0.001215084,0.00009279816,0.0001629904,0.0002088331,0.00003837444,0.00002179993,0.001483457],"genre_scores_gemma":[0.9984335,0.0000703225,0.0003467359,0.0002520617,0.0001435063,0.00004585493,0.00002319273,0.00003078185,0.0006540664],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01037017,"threshold_uncertainty_score":0.57344,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994568187","doi":"10.1016/j.ccr.2012.06.005","title":"Genetic Alterations Activating Kinase and Cytokine Receptor Signaling in High-Risk Acute Lymphoblastic Leukemia","year":2012,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Acute Lymphoblastic Leukemia research","field":"Medicine","cited_by":718,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Center for Advancing Translational Sciences; National Cancer Institute; Medical Research Council; Stand Up To Cancer; Stanford Bio-X; Michael Smith Health Research BC; U.S. Public Health Service; National Institutes of Health; National Health and Medical Research Council; Haematology Society of Australia and New Zealand; Canadian Institutes of Health Research; American Lebanese Syrian Associated Charities; St. Jude Children's Research Hospital; Children’s Oncology Group; Bristol-Myers Squibb","keywords":"PDGFRB; Cancer research; Biology; Tyrosine kinase; Receptor tyrosine kinase; Signal transduction; ABL; Bruton's tyrosine kinase; Fms-Like Tyrosine Kinase 3; Leukemia; Gene expression profiling; Gene; Genetics; Mutation; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.0132721938011929,"gpt":0.2719726683335887,"spread":0.2587004745323958,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002230123,0.0002398547,0.0003458968,0.0001422964,0.0001376996,0.00003665247,0.0001045034,0.0001385833,0.000560855],"category_scores_gemma":[0.0001443618,0.0002175017,0.00004788049,0.0003380852,0.00009853285,0.0002411347,0.0001057689,0.0003117342,0.00005691912],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003382713,"about_ca_system_score_gemma":0.0008675465,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00224063,"about_ca_topic_score_gemma":0.00007764357,"domain_scores_codex":[0.9981599,0.00009133938,0.0003630651,0.000365555,0.0003354133,0.0006847381],"domain_scores_gemma":[0.9987593,0.0003310447,0.0001292628,0.000291441,0.000093833,0.0003950763],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004980337,0.0002090114,0.1270152,0.0003548375,0.0001695702,0.00008701242,0.002319837,0.001560634,0.8453842,0.00005039462,0.002316075,0.02003515],"study_design_scores_gemma":[0.02433273,0.0008375804,0.1673712,0.001192758,0.0008287591,0.0001881453,0.001094193,0.03554872,0.759889,0.00009844147,0.007336201,0.001282297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948648,0.002072482,0.001600626,0.0001262087,0.0002691756,0.000444971,0.00006349802,0.00004936399,0.0005088615],"genre_scores_gemma":[0.9905264,0.001287416,0.006287991,0.000261604,0.0008433568,0.0001564087,0.0000288681,0.00006182867,0.0005461639],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08549523,"threshold_uncertainty_score":0.8869464,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2795622837","doi":"10.1016/j.ccell.2018.03.010","title":"Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas","year":2018,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":710,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency; University of Calgary","funders":"National Human Genome Research Institute; National Institute on Alcohol Abuse and Alcoholism; National Cancer Institute; National Institutes of Health; Astex Pharmaceuticals; National Institute of Diabetes and Digestive and Kidney Diseases; Array BioPharma; Merck; Intramural Research Program; U.S. Department of Veterans Affairs","keywords":"Biology; MLH1; Microsatellite instability; KRAS; Genome instability; Genetics; Chromosome instability; Cancer research; Context (archaeology); Adenocarcinoma; Cancer; Colorectal cancer; DNA mismatch repair; Gene; DNA; DNA damage; Allele; Microsatellite; Chromosome","retraction":null,"screen_n_in":null,"score":{"opus":0.03324264485780736,"gpt":0.3280796081842385,"spread":0.2948369633264311,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004808259,0.0001166879,0.0004053649,0.0001049268,0.00002094266,0.000003758062,0.00009192685,0.00003001712,0.002894577],"category_scores_gemma":[0.0000119597,0.0001048538,0.0001442981,0.0005631715,0.0002285158,0.00001711465,0.00003447356,0.00008056205,0.00001967301],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000158592,"about_ca_system_score_gemma":0.0001734531,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003363614,"about_ca_topic_score_gemma":0.0002330009,"domain_scores_codex":[0.9991493,0.0000230962,0.0001938647,0.00023214,0.0002160493,0.0001855962],"domain_scores_gemma":[0.9991887,0.00002818599,0.000100181,0.0002745954,0.0003006495,0.0001077009],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004161393,0.000121196,0.26599,0.00007894948,0.0006775758,0.00002281058,0.001233456,0.0003302571,0.7286999,0.00003467326,0.002028094,0.0003669083],"study_design_scores_gemma":[0.0006318603,0.001089752,0.2044623,0.00005956013,0.001942507,0.00001008829,0.0002674569,0.002037875,0.7886847,0.00001562173,0.0006758015,0.0001224507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9692064,0.001566717,0.001216229,0.00005099581,0.0001125039,0.0001607781,0.00002167235,0.00001734731,0.02764739],"genre_scores_gemma":[0.9956311,0.00001386548,0.00357583,0.0001927173,0.00009311861,0.00001932512,0.000009967198,0.0000110383,0.0004530518],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0615277,"threshold_uncertainty_score":0.9980169,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2795441251","doi":"10.1016/j.ccell.2018.03.014","title":"A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers","year":2018,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":700,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency","funders":"National Cancer Institute; National Human Genome Research Institute","keywords":"Breast cancer; Biology; Somatic cell; Gene; Cancer research; Estrogen receptor; Oncology; Bioinformatics; Internal medicine; Medicine; Cancer; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01089832632483124,"gpt":0.2650938096934932,"spread":0.2541954833686619,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003766263,0.0001683919,0.000209882,0.00002186171,0.00006250454,0.00001425774,0.0001533625,0.00008998819,0.0001270533],"category_scores_gemma":[0.000008283264,0.0001646906,0.0000450474,0.00008032706,0.0001794803,0.000002921342,0.000161222,0.00005425997,0.000002310416],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007849337,"about_ca_system_score_gemma":0.0002143537,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003103306,"about_ca_topic_score_gemma":0.003312497,"domain_scores_codex":[0.9990657,0.00003093498,0.0001873831,0.0003924882,0.00009624226,0.0002272715],"domain_scores_gemma":[0.9992487,0.00001798027,0.0001220627,0.00029978,0.000226711,0.00008474286],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003216722,0.0003099628,0.03334202,0.00009790263,0.000227695,0.000009807609,0.0006467908,0.000487837,0.9420424,0.0000272367,0.004309166,0.01817752],"study_design_scores_gemma":[0.00727463,0.005709447,0.1102318,0.00007372992,0.0004014925,0.00001982715,0.004321286,0.0002825086,0.7695985,0.0001224664,0.1008007,0.001163543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983705,0.0142086,0.00005506302,0.00004736892,0.0003671098,0.0003559882,0.0001472828,0.000006224688,0.001107366],"genre_scores_gemma":[0.9935886,0.005229099,0.00007486573,0.0005360208,0.0002922562,0.0001171642,0.00001082416,0.0000246433,0.0001264737],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1724438,"threshold_uncertainty_score":0.6715887,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2059613997","doi":"10.1016/j.ccr.2011.10.015","title":"Inhibition of Mitochondrial Translation as a Therapeutic Strategy for Human Acute Myeloid Leukemia","year":2011,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":694,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Princess Margaret Cancer Centre; BC Cancer Agency; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Myeloid leukemia; Tigecycline; Leukemia; Biology; Mitochondrion; Haematopoiesis; Myeloid; Cancer research; Translation (biology); Gene knockdown; HL60; Progenitor cell; Mitochondrial biogenesis; Stem cell; Apoptosis; Cell biology; Molecular biology; Biochemistry; Immunology; Gene; Messenger RNA; Antibiotics","retraction":null,"screen_n_in":null,"score":{"opus":0.04847561866900412,"gpt":0.3230463821924744,"spread":0.2745707635234703,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006081973,0.0001097348,0.0001157255,0.00002953566,0.00006036555,0.000006677396,0.00009355749,0.0001529689,0.0001553187],"category_scores_gemma":[0.000002990185,0.0001117083,0.0001054708,0.00005103218,0.00007973002,0.000006485307,0.00001354013,0.00006301979,0.000005489212],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007340662,"about_ca_system_score_gemma":0.0002505617,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004302891,"about_ca_topic_score_gemma":0.0003420732,"domain_scores_codex":[0.9992286,0.00003347242,0.0001892542,0.0002480084,0.0001121482,0.0001885344],"domain_scores_gemma":[0.9995561,0.000005582738,0.00007799754,0.00019553,0.0001110356,0.00005380761],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003265115,0.00004239866,0.000009724084,0.0000465836,0.00003847855,9.509168e-7,0.000362557,0.00001593523,0.9949344,0.0000608232,0.0005921592,0.00356947],"study_design_scores_gemma":[0.001161795,0.0006479006,0.00002536477,0.00001281919,0.00003799553,0.000001422712,0.0000761438,0.00002462879,0.9935185,0.0002740843,0.004096333,0.0001230215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9867259,0.001500458,0.002542951,0.00001114466,0.0001612911,0.0004915792,0.00008069311,0.000009444591,0.008476572],"genre_scores_gemma":[0.9973944,0.0001982124,0.000518931,0.0000394644,0.000301435,0.0001559824,0.0001777727,0.00002768418,0.001186121],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01066853,"threshold_uncertainty_score":0.4555332,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2346239022","doi":"10.1016/j.ccell.2016.04.002","title":"Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma","year":2016,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Adrenal and Paraganglionic Tumors","field":"Medicine","cited_by":658,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency; University Health Network","funders":"National Cancer Institute; National Human Genome Research Institute; National Institutes of Health; Novartis; Bayer","keywords":"Adrenocortical carcinoma; Biology; DNA methylation; genomic DNA; Genome; CpG site; Cancer research; Gene; Genome instability; DNA; Genetics; Computational biology; Gene expression; DNA damage; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.0203458624929826,"gpt":0.2568220597292469,"spread":0.2364761972362643,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00001479635,0.00007893087,0.0001843552,0.0000228127,0.00001551427,0.00000151978,0.0000427643,0.00003972407,0.0009876447],"category_scores_gemma":[0.000003649493,0.00004965115,0.00005256822,0.00005578369,0.00006479935,0.00003531385,0.00001972523,0.00003715481,0.00006442345],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006960968,"about_ca_system_score_gemma":0.0001039,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006286086,"about_ca_topic_score_gemma":0.000003384539,"domain_scores_codex":[0.9994575,0.00001320626,0.0001687216,0.0001368547,0.00008895652,0.0001347006],"domain_scores_gemma":[0.9995978,0.00002284827,0.00007171429,0.0001440398,0.00008385183,0.00007969354],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001958675,0.00004790762,0.02506092,0.00009555611,0.00001407349,0.00007405434,0.0001323169,2.375678e-7,0.9655008,0.00007479024,0.0001442175,0.00865923],"study_design_scores_gemma":[0.00111424,0.0001275915,0.6728289,0.00007241401,0.0000494325,0.00005382215,0.00002010885,0.00001369974,0.3218339,0.00001612192,0.00379559,0.00007420248],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973043,0.0004752585,0.0002715793,0.0003050756,0.0001610485,0.0001600989,0.00004260349,0.00001712719,0.001262892],"genre_scores_gemma":[0.9969984,0.00009607968,0.00002972545,0.0002294473,0.0001986776,0.00001361964,0.00001706508,0.00001284499,0.002404185],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6477679,"threshold_uncertainty_score":0.9999256,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2286341552","doi":"10.1016/j.ccell.2016.02.001","title":"Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes","year":2016,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":575,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto; McGill University Health Centre","funders":"Heidelberger Zentrum für Personalisierte Onkologie Deutsches Krebsforschungszentrum In Der Helmholtz-Gemeinschaft; Deutsches Krebsforschungszentrum","keywords":"Atypical teratoid rhabdoid tumor; SMARCB1; Biology; Epigenetics; DNA methylation; Genetics; Enhancer; Chromatin; Epigenomics; Cancer research; Gene; Chromatin remodeling; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.007703200008490454,"gpt":0.2191053437738205,"spread":0.21140214376533,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005466636,0.0001865737,0.0002313036,0.00001466023,0.00004676091,0.000009529937,0.0001899593,0.00009549709,0.0002366007],"category_scores_gemma":[0.000008877144,0.0001170811,0.00008093755,0.00005622554,0.0001044664,0.000003694008,0.00005412149,0.00005062574,0.000007634968],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003862814,"about_ca_system_score_gemma":0.0001244312,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006184008,"about_ca_topic_score_gemma":0.001237465,"domain_scores_codex":[0.9989879,0.00002574231,0.0002209427,0.0003649483,0.0001517198,0.0002488136],"domain_scores_gemma":[0.9992626,0.00001650894,0.0001570768,0.0003625517,0.0001112546,0.00008997045],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000531909,0.0000828034,0.0648047,0.0001155854,0.00005356273,0.00000374476,0.00004304011,0.0001591323,0.9254196,0.000006166975,0.0009701988,0.007809556],"study_design_scores_gemma":[0.001654021,0.0003136928,0.03053737,0.0002683602,0.0000383632,0.000004619794,0.0000405791,0.0001389834,0.9616455,0.00004290937,0.004992635,0.0003230119],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9857529,0.005186096,0.007794775,0.00007992073,0.0001032029,0.0001408194,0.00006929588,0.0000159016,0.0008570845],"genre_scores_gemma":[0.9982681,0.0005148797,0.0003127122,0.00005847306,0.000263477,0.0000526622,0.00001746742,0.00003278016,0.000479457],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03622586,"threshold_uncertainty_score":0.4774429,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2140048538","doi":"10.1016/j.ccr.2011.07.007","title":"Delineation of Two Clinically and Molecularly Distinct Subgroups of Posterior Fossa Ependymoma","year":2011,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":560,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; Hospital for Sick Children; McMaster University; University of Toronto","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Cancer Institute; Wilhelm Sander-Stiftung; Pediatric Brain Tumor Foundation","keywords":"Ependymoma; Posterior fossa; Biology; Medicine; Cancer research; Computational biology; Neuroscience; Internal medicine; Pathology; Anatomy","retraction":null,"screen_n_in":null,"score":{"opus":0.0359660232954683,"gpt":0.3090150603476625,"spread":0.2730490370521942,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007048152,0.00007894365,0.0002269321,0.00002390038,0.0000105965,0.000002293444,0.00003344537,0.00003651566,0.0002435719],"category_scores_gemma":[0.00001673668,0.00006222996,0.00006415642,0.00004711307,0.0000524523,0.00003024533,0.00002298419,0.0000320431,0.000002715757],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002243965,"about_ca_system_score_gemma":0.00004233233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001306775,"about_ca_topic_score_gemma":0.0001568297,"domain_scores_codex":[0.9993549,0.00001615027,0.0002998658,0.0001444757,0.00009884172,0.00008578682],"domain_scores_gemma":[0.9994653,0.00002465252,0.0001477367,0.0001681465,0.000123409,0.00007072112],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005605775,0.0009056838,0.8601344,0.0002390057,0.0001190558,0.0001288022,0.0008142918,0.000001073847,0.0775162,0.00007698899,0.00005097529,0.05945291],"study_design_scores_gemma":[0.004085789,0.001178813,0.6108774,0.0001478219,0.0003972935,0.000023528,0.00006755779,0.0001259476,0.3828412,0.00005988242,0.0001033949,0.00009131201],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951608,0.002098923,0.0002745941,0.00004363783,0.00006150732,0.0002011214,0.00002567365,0.000005056932,0.00212864],"genre_scores_gemma":[0.9973845,0.000150348,0.00228728,0.00005670772,0.00002876685,0.00002208132,0.00001202778,0.00001030597,0.00004794298],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.305325,"threshold_uncertainty_score":0.2666942,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2113282518","doi":"10.1016/j.ccr.2012.05.037","title":"VEGF Inhibits Tumor Cell Invasion and Mesenchymal Transition through a MET/VEGFR2 Complex","year":2012,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":555,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Neurological Disorders and Stroke; National Cancer Institute; Canadian Institutes of Health Research","keywords":"Cancer research; Mesenchymal stem cell; Epithelial–mesenchymal transition; Biology; Cell biology; Phosphorylation; Vascular endothelial growth factor; Angiogenesis; VEGF receptors; Metastasis; Cancer","retraction":null,"screen_n_in":null,"score":{"opus":0.02258804418172135,"gpt":0.2580370891757968,"spread":0.2354490449940755,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001104753,0.0001967717,0.000200515,0.00001857628,0.00009505379,0.00001996314,0.00009155792,0.0001133794,0.0001556284],"category_scores_gemma":[0.000004848144,0.0001891743,0.00008544905,0.000070191,0.00008050507,0.00002335948,0.00006169535,0.00009221602,0.00001217089],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000277705,"about_ca_system_score_gemma":0.00008050144,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002172066,"about_ca_topic_score_gemma":0.000121621,"domain_scores_codex":[0.9989439,0.00005227065,0.000177839,0.0003204835,0.000128602,0.0003769095],"domain_scores_gemma":[0.9994795,0.00000653972,0.00007843361,0.0002262842,0.00005342458,0.0001558605],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006810145,0.00008370563,0.0001727227,0.00009489217,0.00001339656,4.534507e-7,0.0009857098,0.00001051649,0.9890203,0.00003096783,0.007195307,0.002323878],"study_design_scores_gemma":[0.0008536041,0.0000823045,0.0007118543,0.00001275523,0.00004977067,0.00001004316,0.000274347,0.000009319627,0.6217203,0.00001976775,0.3760531,0.0002028558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9254119,0.06496678,0.0004659744,0.00008134621,0.0009741556,0.0002313536,0.00007145642,0.00001717702,0.007779794],"genre_scores_gemma":[0.9871927,0.007773089,0.0007657568,0.00119428,0.002291566,0.00005062072,0.0001120608,0.00003178109,0.000588133],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3688578,"threshold_uncertainty_score":0.7714304,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2562236228","doi":"10.1016/j.ccell.2016.11.005","title":"Nerve Growth Factor Promotes Gastric Tumorigenesis through Aberrant Cholinergic Signaling","year":2016,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer, Stress, Anesthesia, and Immune Response","field":"Medicine","cited_by":549,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institutes of Health; Plexxikon; Japan Society for the Promotion of Science London; Japan Agency for Medical Research and Development; Japan Society for the Promotion of Science; Nakayama Cancer Research Institute; Okinaka Memorial Institute for Medical Research; Uehara Memorial Foundation","keywords":"Carcinogenesis; Cholinergic; Nerve growth factor; Cancer research; Signal transduction; Growth factor; Cell biology; Biology; Cancer; Neuroscience; Receptor; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02469858962558772,"gpt":0.2676949705935865,"spread":0.2429963809679988,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009973687,0.0003130985,0.0004896902,0.00007299029,0.000106595,0.00002560654,0.0001806788,0.0001132004,0.00134317],"category_scores_gemma":[0.00005421309,0.0002023369,0.0002378175,0.0002636293,0.0001181899,0.0002122447,0.00003284318,0.0001284396,0.00008861515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000368765,"about_ca_system_score_gemma":0.0004223834,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001316703,"about_ca_topic_score_gemma":0.00003580526,"domain_scores_codex":[0.9982175,0.00006736607,0.0003771965,0.0004676293,0.0003247406,0.000545536],"domain_scores_gemma":[0.9989246,0.0001351802,0.000170001,0.000408544,0.0001793044,0.000182441],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001835934,0.0004089283,0.02378579,0.0005701277,0.0001585663,0.0002319207,0.001622779,0.00001468851,0.9430128,0.00003808246,0.00716882,0.02115154],"study_design_scores_gemma":[0.004716367,0.0006270763,0.02603227,0.0007415834,0.0002775724,0.0001558085,0.0002654625,0.00003598909,0.9204512,0.00008190914,0.04599804,0.0006166667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9705762,0.02519574,0.0003340464,0.001102669,0.0005730378,0.0004405927,0.0000509976,0.0001303003,0.001596411],"genre_scores_gemma":[0.9824896,0.007555678,0.0002666659,0.0003146314,0.001575755,0.0001165077,0.000008787239,0.00007514305,0.007597251],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03882922,"threshold_uncertainty_score":0.9995697,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2078312014","doi":"10.1016/j.ccr.2005.02.010","title":"DJ-1, a novel regulator of the tumor suppressor PTEN","year":2005,"lang":"en","type":"article","venue":"Cancer Cell","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":545,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"PTEN; Protein kinase B; Hyperphosphorylation; Cancer research; PI3K/AKT/mTOR pathway; Biology; Suppressor; Regulator; Tumor suppressor gene; Phosphorylation; Kinase; Cancer; Carcinogenesis; Signal transduction; Cell biology; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.009012413782495553,"gpt":0.2397012926074727,"spread":0.2306888788249772,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007576818,0.0001269652,0.0001250498,0.000009338882,0.00004263678,0.000008199238,0.0003746837,0.0000836761,0.000246463],"category_scores_gemma":[0.00001787997,0.00009728227,0.0001162841,0.00006246328,0.0001035004,0.000003493106,0.0001201887,0.00007118263,0.000005822742],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005603229,"about_ca_system_score_gemma":0.0001761278,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008485038,"about_ca_topic_score_gemma":0.0001282242,"domain_scores_codex":[0.9991839,0.00001901985,0.0001780259,0.0002647578,0.0001439698,0.0002103278],"domain_scores_gemma":[0.9992076,0.000007643996,0.0001272858,0.0005215979,0.00008222178,0.00005367574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004122105,0.00004437302,0.000598885,0.00002711108,0.00002425342,2.012444e-7,0.00004845063,0.0006236719,0.9845219,0.00002086276,0.01349041,0.0005586674],"study_design_scores_gemma":[0.0004229791,0.00003084693,0.0006777318,0.00001925395,0.00001968694,0.000002304859,0.00001368158,0.0001038439,0.7647545,0.000005831259,0.2338451,0.0001042546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9857907,0.00685016,0.000222308,0.0004450881,0.000546322,0.0002087473,0.000145962,0.00001178708,0.005778977],"genre_scores_gemma":[0.9940181,0.00007170292,0.0004878356,0.0007830739,0.0007128404,0.00004495817,0.000007706535,0.00002840142,0.003845397],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2203547,"threshold_uncertainty_score":0.3967056,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2063382154","doi":"10.1016/j.ccr.2011.12.006","title":"KrasG12D-Induced IKK2/β/NF-κB Activation by IL-1α and p62 Feedforward Loops Is Required for Development of Pancreatic Ductal Adenocarcinoma","year":2012,"lang":"en","type":"article","venue":"Cancer Cell","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":520,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Cancer Institute; Public Health Agency of Canada","keywords":"KRAS; Cancer research; NF-κB; Pancreatic cancer; Pancreatic ductal adenocarcinoma; NFKB1; Cancer; Biology; Medicine; Signal transduction; Internal medicine; Gene; Transcription factor; Colorectal cancer; Cell biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02799657956216113,"gpt":0.2664795880088013,"spread":0.2384830084466402,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001523647,0.0001839818,0.0001995851,0.00002387282,0.00008121449,0.00001160446,0.0001156217,0.0001661142,0.00003216365],"category_scores_gemma":[0.00002456315,0.0001843322,0.00005578484,0.00005642408,0.0000404756,0.0000141395,0.00006408156,0.00004985526,0.000002761712],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007350428,"about_ca_system_score_gemma":0.0001752263,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004848685,"about_ca_topic_score_gemma":0.000009197697,"domain_scores_codex":[0.9989683,0.00002281403,0.0002602526,0.0003011978,0.0001257277,0.0003217231],"domain_scores_gemma":[0.9993764,0.00001734396,0.0001701179,0.0002234993,0.00009724891,0.000115437],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008927134,0.00005317114,0.005523284,0.0001392323,0.00006809776,1.2509e-7,0.0007204272,0.00000110025,0.9894471,0.000006534801,0.002495202,0.001456496],"study_design_scores_gemma":[0.0007168266,0.0001308441,0.0022176,0.0000304662,0.00005306498,0.000002000044,0.0001602692,0.00001472067,0.985401,0.00001045623,0.011038,0.0002247695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929173,0.00418346,0.001957752,0.00005622896,0.0001701288,0.000340504,0.00008677044,0.00001035002,0.0002775187],"genre_scores_gemma":[0.9963421,0.0001122713,0.002248134,0.000168457,0.0002348149,0.0001177687,0.0001649648,0.0000374051,0.0005740474],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008542802,"threshold_uncertainty_score":0.751685,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3135213711","doi":"10.1016/j.ccell.2021.02.013","title":"Progressive immune dysfunction with advancing disease stage in renal cell carcinoma","year":2021,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":517,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; Genentech; EMD Serono; Fondation de France; Eisai; Parker Institute for Cancer Immunotherapy; Danmarks Frie Forskningsfond; Kay Kendall Leukaemia Fund; Celldex Therapeutics; National Institutes of Health; BioMarin Pharmaceutical; Harvard Medical School; National Cancer Institute; Chinook Therapeutics; Gilead Sciences; G. Harold and Leila Y. Mathers Foundation; Dermatology Foundation; Leukemia and Lymphoma Society; Novartis; Bristol-Myers Squibb; Dana-Farber/Harvard Cancer Center; Merck; GlaxoSmithKline; Dana-Farber Cancer Institute; Roche; Astellas Pharma US; Pfizer; U.S. Department of Defense; Eli Lilly and Company; AstraZeneca; American Association for Cancer Research; Conquer Cancer Foundation; Exelixis","keywords":"Immune system; Immunotherapy; Cancer research; Tumor microenvironment; Clear cell renal cell carcinoma; CD8; Renal cell carcinoma; Biology; T cell; Myeloid; Cytotoxic T cell; Cell; Immunology; Cancer; Medicine; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.008063668867447894,"gpt":0.245670689036705,"spread":0.2376070201692571,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007711653,0.000162625,0.000224185,0.00004614165,0.00005348022,0.0000185809,0.00005089252,0.00004884632,0.001493108],"category_scores_gemma":[0.000005978472,0.0001339425,0.00008052985,0.0002868419,0.00005818595,0.0001151769,0.00002372294,0.0001656787,0.000005640191],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005132119,"about_ca_system_score_gemma":0.0008779306,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005664444,"about_ca_topic_score_gemma":0.0003402974,"domain_scores_codex":[0.9988931,0.00003619119,0.0002158241,0.0003410626,0.0002097421,0.0003040352],"domain_scores_gemma":[0.9993149,0.00001754898,0.0001040569,0.0003127495,0.0001062819,0.0001444663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.01838485,0.0007919682,0.1884965,0.001549597,0.00009116845,0.00488704,0.001228382,0.000294204,0.7638619,0.000008262984,0.001406981,0.01899913],"study_design_scores_gemma":[0.01234886,0.0005545371,0.2623368,0.0006929126,0.0001775804,0.00003050018,0.001589619,0.0002123544,0.6931054,0.00000565233,0.02854004,0.0004057402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9405321,0.05442884,0.000100323,0.0003922876,0.000256901,0.0003651092,0.00002723717,0.00003082696,0.003866339],"genre_scores_gemma":[0.9891098,0.0005304249,0.0002421936,0.000391143,0.0001538316,0.0001260446,0.00006295428,0.00003334845,0.009350242],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07384027,"threshold_uncertainty_score":0.9994197,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2118238803","doi":"10.1016/j.ccr.2010.04.027","title":"Regression of Castrate-Recurrent Prostate Cancer by a Small-Molecule Inhibitor of the Amino-Terminus Domain of the Androgen Receptor","year":2010,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":508,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Cancer Agency; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Transactivation; Androgen receptor; Prostate cancer; Androgen; Cancer research; Receptor; Small molecule; Androgen Receptor Antagonists; Endocrinology; Biology; Internal medicine; Chemistry; Gene; Medicine; Cancer; Transcription factor; Biochemistry; Hormone","retraction":null,"screen_n_in":null,"score":{"opus":0.01518591805299086,"gpt":0.2911771918174362,"spread":0.2759912737644454,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001413274,0.0001840677,0.0003318199,0.00002978451,0.00006640064,0.000005739902,0.0002538008,0.0001053699,0.0002987857],"category_scores_gemma":[0.00001555968,0.00008683564,0.0001718579,0.0002519216,0.0004231814,0.00003498164,0.0001209363,0.0002932199,0.000001265198],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001378201,"about_ca_system_score_gemma":0.0007261244,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001089616,"about_ca_topic_score_gemma":0.0006474162,"domain_scores_codex":[0.9986558,0.00007092784,0.0003509911,0.0002489878,0.0003951306,0.0002781819],"domain_scores_gemma":[0.9987918,0.00002946475,0.0003444954,0.0004916838,0.0002377123,0.0001048453],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005750002,0.0002422997,0.03097938,0.0005108818,0.00005244228,0.000003353136,0.001166352,0.000001219385,0.9536834,0.000004887377,0.006314258,0.006466485],"study_design_scores_gemma":[0.002154991,0.0002386748,0.003029461,0.0007216191,0.00008648176,0.000003385285,0.0002291957,0.00001039494,0.9875479,0.00001048076,0.005878406,0.00008900047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9875697,0.008566121,5.302339e-7,0.0006770549,0.0008144517,0.001019922,0.0005154976,0.00000684458,0.0008298811],"genre_scores_gemma":[0.9938853,0.001434244,0.00004541801,0.00003788922,0.0001066499,0.0001676189,0.00001681775,0.00002657887,0.004279416],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03386446,"threshold_uncertainty_score":0.3541054,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1981083415","doi":"10.1016/j.ccr.2005.10.015","title":"The tumor suppressor PP2A is functionally inactivated in blast crisis CML through the inhibitory activity of the BCR/ABL-regulated SET protein","year":2005,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Chronic Myeloid Leukemia Treatments","field":"Medicine","cited_by":472,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"National Institutes of Health; National Cancer Institute; University of Pennsylvania","keywords":"Chronic myelogenous leukemia; Cancer research; Protein phosphatase 2; breakpoint cluster region; Progenitor cell; Imatinib mesylate; ABL; Biology; Imatinib; Leukemia; Stem cell; Cell biology; Phosphorylation; Immunology; Signal transduction; Phosphatase; Myeloid leukemia; Tyrosine kinase; Receptor; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01474678763094991,"gpt":0.2611239385216091,"spread":0.2463771508906592,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002013846,0.0002651,0.0003153073,0.00002597039,0.0002256702,0.00002083001,0.0002960416,0.0001150521,0.0007000873],"category_scores_gemma":[0.00005065041,0.000132283,0.0001564398,0.0003298351,0.0002510988,0.0001834778,0.0001329905,0.0004793177,0.00002609262],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002327437,"about_ca_system_score_gemma":0.000973194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003710965,"about_ca_topic_score_gemma":0.001728471,"domain_scores_codex":[0.9981952,0.0001808703,0.0003503361,0.0003691226,0.0005098594,0.0003945767],"domain_scores_gemma":[0.9985228,0.0001598504,0.0002806368,0.0008341637,0.0001426982,0.00005983137],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00398245,0.00150371,0.006989636,0.0004644763,0.0008196562,0.00002913779,0.008793907,0.001567953,0.8257056,0.0001365651,0.1430647,0.006942251],"study_design_scores_gemma":[0.003795061,0.000111177,0.01974518,0.0002245006,0.0001303526,0.00001052492,0.0007310408,0.0004715726,0.9058111,0.00005280842,0.06876132,0.0001553399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983938,0.001247768,0.000004846407,0.009876699,0.0002518135,0.001504168,0.00008066146,0.00003520232,0.00306087],"genre_scores_gemma":[0.993412,0.00009146021,0.00002859396,0.0009357337,0.000282056,0.000362838,0.000008785242,0.00004104405,0.004837518],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08010555,"threshold_uncertainty_score":0.7665465,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3015449027","doi":"10.1016/j.ccell.2020.03.011","title":"Integrated Molecular and Clinical Analysis of 1,000 Pediatric Low-Grade Gliomas","year":2020,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":472,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; SickKids Foundation; Princess Margaret Cancer Centre; Hospital for Sick Children; University of Toronto","funders":"Hospital for Sick Children; Ontario Genomics Institute; National Cancer Institute; Government of Canada; Canadian Institutes of Health Research; Genome Canada; American Lebanese Syrian Associated Charities; St. Jude Children's Research Hospital; Canadian Cancer Society; Pediatric Low Grade Astrocytoma Foundation","keywords":"Cohort; MAPK/ERK pathway; Downregulation and upregulation; Biology; Protein kinase A; Histology; Bioinformatics; Oncology; Cancer research; Medicine; Kinase; Internal medicine; Pathology; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02635705817207019,"gpt":0.3148346819868627,"spread":0.2884776238147925,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004948982,0.0001087338,0.0004476014,0.00009720069,0.00001257575,0.000006420426,0.00004472212,0.00006789123,0.0003532089],"category_scores_gemma":[0.00002926714,0.00008358026,0.0002148414,0.0009379674,0.00003896067,0.00001862869,0.00002460841,0.00008265426,0.000005677289],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003438619,"about_ca_system_score_gemma":0.00006164853,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003442852,"about_ca_topic_score_gemma":0.00003907424,"domain_scores_codex":[0.999166,0.00003181658,0.0002895701,0.0002578195,0.0001357996,0.0001189582],"domain_scores_gemma":[0.9994014,0.00005352725,0.00009334269,0.0001568405,0.00006722365,0.0002276942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001039521,0.000544906,0.9877251,0.0001350831,0.001414625,0.0002715939,0.0001714573,0.0001167305,0.005305198,0.00001913343,0.001579119,0.002613117],"study_design_scores_gemma":[0.01029282,0.001694,0.7811374,0.00007470529,0.04396461,0.000004920447,0.0003741682,0.01611,0.1381062,0.00001650532,0.00774383,0.0004808326],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9866604,0.01158331,0.00005561084,0.0009688945,0.00005171729,0.0001531065,0.00005087681,0.00001921572,0.0004568306],"genre_scores_gemma":[0.9961479,0.002929397,0.0001820594,0.0005816427,0.00008346738,0.00001453806,0.00003406182,0.0000118632,0.00001511035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2065877,"threshold_uncertainty_score":0.386739,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2036797607","doi":"10.1016/j.ccr.2012.12.021","title":"Endothelial Cells Promote the Colorectal Cancer Stem Cell Phenotype through a Soluble Form of Jagged-1","year":2013,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":450,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Montreal Children's Hospital","funders":"National Cancer Institute","keywords":"Phenotype; Colorectal cancer; Stem cell; Cancer research; Biology; Cell biology; Cancer stem cell; Endothelial stem cell; Immunology; Medicine; Cancer; Genetics; In vitro; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01905358000570147,"gpt":0.2597909630186479,"spread":0.2407373830129464,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001464341,0.0003158592,0.0005621352,0.00003210526,0.0001277944,0.00003644743,0.0002823491,0.0001295508,0.006241426],"category_scores_gemma":[0.000003112666,0.0002112422,0.0002363105,0.0003058801,0.0002182586,0.0002117207,0.0001024588,0.0002899359,0.0001459003],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003585477,"about_ca_system_score_gemma":0.0007450448,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01537928,"about_ca_topic_score_gemma":0.0009855388,"domain_scores_codex":[0.9980421,0.00003875061,0.0004547952,0.0004330884,0.000433128,0.0005981456],"domain_scores_gemma":[0.9986342,0.00005167692,0.0003053777,0.0004829383,0.0003477535,0.0001780317],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004027893,0.0003860604,0.0003463414,0.0009670444,0.0001679285,0.000007375301,0.006831222,0.00008684969,0.9123452,0.00005154846,0.05026754,0.02814014],"study_design_scores_gemma":[0.00209589,0.0003043631,0.0001497413,0.00009693255,0.0002803812,0.00000288128,0.0006994426,0.0001270045,0.8275223,0.0001130401,0.1683867,0.0002213501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8964427,0.01938424,0.0001512579,0.001200015,0.002807878,0.002873036,0.0003303715,0.00008667997,0.07672387],"genre_scores_gemma":[0.9716158,0.0058131,0.0006544383,0.0008947903,0.0007403793,0.0007041208,0.00001106095,0.00008670174,0.01947961],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1181191,"threshold_uncertainty_score":0.994667,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2167100625","doi":"10.1016/j.ccr.2009.03.017","title":"Translational Activation of Snail1 and Other Developmentally Regulated Transcription Factors by YB-1 Promotes an Epithelial-Mesenchymal Transition","year":2009,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":445,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Epithelial–mesenchymal transition; Downregulation and upregulation; Transcription factor; Messenger RNA; Transcription (linguistics); Cancer research; Biology; Cell biology; Translation (biology); Regulation of gene expression; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02002758923579574,"gpt":0.2629095137766269,"spread":0.2428819245408312,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008258413,0.0001479247,0.0002187441,0.00005397329,0.00004885231,0.00001006889,0.00003168386,0.0000922442,0.000512231],"category_scores_gemma":[0.000001577376,0.0001311025,0.00007081153,0.0001215731,0.00004704436,0.0002205667,0.000001012064,0.00007537026,5.096301e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007766786,"about_ca_system_score_gemma":0.0001169767,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000382047,"about_ca_topic_score_gemma":0.00007001752,"domain_scores_codex":[0.999125,0.00002808895,0.0002469714,0.0002383546,0.0002137635,0.0001478283],"domain_scores_gemma":[0.9996523,0.000009229023,0.00007948842,0.0000910193,0.00006576691,0.0001021583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003361286,0.000203237,0.0005547302,0.00009169435,0.0000334877,4.176276e-7,0.003983918,0.00002020642,0.9577538,0.00002187785,0.0001341069,0.03686643],"study_design_scores_gemma":[0.002002863,0.0003892946,0.01855058,0.0001043318,0.0001301247,0.000002728985,0.0003335527,0.0001646611,0.9726232,0.0001000686,0.005431364,0.0001671884],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948131,0.0008828741,0.002316558,0.0006280942,0.00006201405,0.0004016836,0.0001646925,0.00003220689,0.0006987312],"genre_scores_gemma":[0.9980901,0.000196846,0.0008612333,0.0003178019,0.00006546568,0.000010078,0.0002378773,0.00001752366,0.0002030946],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03669924,"threshold_uncertainty_score":0.560857,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2595991414","doi":"10.1016/j.ccell.2017.02.010","title":"Integrated Molecular Characterization of Uterine Carcinosarcoma","year":2017,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":444,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency","funders":"National Cancer Institute; National Human Genome Research Institute; National Institutes of Health","keywords":"PTEN; Biology; Somatic cell; Carcinosarcoma; KRAS; Epigenetics; Cancer research; Transcriptome; Epigenomics; Gene; GNAQ; Serous fluid; DNA methylation; Carcinoma; Genetics; Mutation; PI3K/AKT/mTOR pathway; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.02238540813939906,"gpt":0.3003475547202094,"spread":0.2779621465808103,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000209335,0.00008145347,0.0001778865,0.00001907384,0.00004160409,0.00001297061,0.00007458265,0.00003340305,0.000433308],"category_scores_gemma":[0.000007169881,0.0000643515,0.00005657861,0.00002188843,0.00003744474,0.00005037648,0.00002830138,0.00003557814,0.000008525853],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006499856,"about_ca_system_score_gemma":0.00005160185,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006774588,"about_ca_topic_score_gemma":0.00002705259,"domain_scores_codex":[0.9995689,0.000007659522,0.0001148399,0.0001261145,0.00008764026,0.00009487617],"domain_scores_gemma":[0.9993555,0.000004267523,0.0001146588,0.0003915642,0.00007850809,0.00005549732],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004769288,0.0002084672,0.2882515,0.00008074708,0.00004028057,0.00008782806,0.00006168895,2.11944e-7,0.6894518,0.00005615721,0.0000811962,0.02163248],"study_design_scores_gemma":[0.0007906507,0.00006190537,0.4348609,0.00005920785,0.00004727919,0.000003002912,0.000007543761,0.00004442866,0.5533012,0.00000508361,0.01077725,0.0000415698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994994,0.0008062983,0.00005727461,0.0004859528,0.0001979417,0.0001810134,0.00003906045,0.00001315701,0.003225341],"genre_scores_gemma":[0.99813,0.0005660614,0.0001321918,0.0001550244,0.00004628842,0.00004538174,0.00005938831,0.00001295473,0.0008527311],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1466094,"threshold_uncertainty_score":0.4744419,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2009337734","doi":"10.1016/j.ccr.2008.08.001","title":"Rapid Chemotherapy-Induced Acute Endothelial Progenitor Cell Mobilization: Implications for Antiangiogenic Drugs as Chemosensitizing Agents","year":2008,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":441,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"National Cancer Institute","keywords":"Mobilization; Progenitor cell; Chemotherapy; Medicine; Pharmacology; Endothelial progenitor cell; Endothelial stem cell; Cancer research; Stem cell; Internal medicine; Biology; Cell biology; Political science; In vitro","retraction":null,"screen_n_in":null,"score":{"opus":0.02575794862567233,"gpt":0.2909763040538662,"spread":0.2652183554281939,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00006510929,0.0002470261,0.0002022668,0.00002288201,0.0002734345,0.00001954635,0.0002293214,0.0001916962,0.0001460665],"category_scores_gemma":[0.000004689269,0.0002535657,0.0003237023,0.0001205831,0.00006125132,0.000009360398,0.00005081857,0.00004314094,0.00001838664],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007547897,"about_ca_system_score_gemma":0.0003230295,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004037089,"about_ca_topic_score_gemma":0.00000763308,"domain_scores_codex":[0.9986972,0.00002288667,0.000249873,0.0005438474,0.0001097538,0.0003764045],"domain_scores_gemma":[0.9990684,0.00001095566,0.0001485784,0.0004411089,0.0002027447,0.0001281585],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000108006,0.0000918433,0.0008382213,0.00003098644,0.0001157138,0.000001349114,0.0001867152,0.00001292829,0.9824708,0.000007491175,0.01171707,0.00441887],"study_design_scores_gemma":[0.001198084,0.0001531331,0.0004876991,0.000006362322,0.00007686722,0.00001715169,0.00006307571,0.00003444363,0.876667,0.00001022074,0.1209996,0.000286447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871073,0.007724635,0.000850173,0.0002906868,0.0004401865,0.0008766654,0.000256448,0.00003791124,0.00241598],"genre_scores_gemma":[0.9824138,0.009856603,0.0008498626,0.001361196,0.001372643,0.000533111,0.0002670217,0.00009049966,0.003255224],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1092825,"threshold_uncertainty_score":0.9999917,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2095943598","doi":"10.1016/j.ccr.2011.01.040","title":"Identification of a Therapeutic Strategy Targeting Amplified FGF19 in Liver Cancer by Oncogenomic Screening","year":2011,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":433,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ontario Institute for Cancer Research","funders":"National Cancer Institute; Hope Funds for Cancer Research; Cold Spring Harbor Laboratory","keywords":"FGF19; Amplicon; Biology; Gene knockdown; Cancer research; Oncogene; Hepatocellular carcinoma; Cancer; Liver cancer; Biomarker; Gene; RNA interference; Cancer cell; Cell cycle; Genetics; Fibroblast growth factor; Polymerase chain reaction; Receptor; RNA","retraction":null,"screen_n_in":null,"score":{"opus":0.04225301335550146,"gpt":0.2941277965981507,"spread":0.2518747832426492,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001600823,0.0001099918,0.0001163887,0.00003284984,0.00002725108,0.00001031908,0.0002082862,0.0001021532,0.0002763316],"category_scores_gemma":[0.000006618764,0.0001127735,0.00004574193,0.00008729767,0.00006077842,0.000007807569,0.00005637465,0.00009404949,0.000005212713],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000568963,"about_ca_system_score_gemma":0.0001192995,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003344481,"about_ca_topic_score_gemma":0.0005486592,"domain_scores_codex":[0.9990503,0.00006036025,0.0002475605,0.0002902585,0.0001068967,0.0002446793],"domain_scores_gemma":[0.9995493,0.00000774218,0.0001257735,0.000196218,0.00007235115,0.00004856853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001212778,0.00004092694,0.009018204,0.00006115554,0.00002340038,7.212234e-7,0.0002361511,0.00009823092,0.986169,0.000006509767,0.0004067038,0.003817692],"study_design_scores_gemma":[0.0003511588,0.00007605777,0.01083132,0.00001944924,0.000008740431,2.512514e-7,0.0001733293,0.0002492538,0.9871072,0.00001245646,0.001042669,0.0001281535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9845755,0.01320884,0.001133879,0.000007652983,0.00005701457,0.0002042072,0.0000617508,0.000005500681,0.0007457304],"genre_scores_gemma":[0.9977651,0.001426616,0.00008332425,0.0000311856,0.00005362008,0.00006669591,0.00003969754,0.00002574407,0.0005080484],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01318965,"threshold_uncertainty_score":0.5055877,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4200501239","doi":"10.1016/j.ccell.2021.12.006","title":"Proteogenomic characterization identifies clinically relevant subgroups of intrahepatic cholangiocarcinoma","year":2021,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cholangiocarcinoma and Gallbladder Cancer Studies","field":"Medicine","cited_by":414,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"National Cancer Institute; Shanghai Institute of Materia Medica, Chinese Academy of Sciences; National Key Research and Development Program of China; Ministry of Science and Technology of the People's Republic of China; Chinese Academy of Sciences; Science and Technology Commission of Shanghai Municipality; Fudan University; National Natural Science Foundation of China; Shanghai Municipal Health Commission","keywords":"KRAS; Pathogenesis; Cancer research; Proteogenomics; Biology; Intrahepatic Cholangiocarcinoma; Metastasis; Signal transduction; Transcriptome; Computational biology; Mutation; Cancer; Gene; Medicine; Immunology; Pathology; Genetics; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.02064029640178111,"gpt":0.2776578269147729,"spread":0.2570175305129918,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001354303,0.0001747281,0.0004815057,0.0000461891,0.00005862206,0.00002139424,0.00009573054,0.00009133697,0.0004657372],"category_scores_gemma":[0.00006095196,0.0001624631,0.0002012335,0.0002051011,0.0000894163,0.00009927467,0.00008370001,0.0001557827,0.00002585974],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00014959,"about_ca_system_score_gemma":0.0003522799,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001420983,"about_ca_topic_score_gemma":0.00009794599,"domain_scores_codex":[0.9985306,0.00004806105,0.0005619458,0.0003773569,0.000235741,0.0002462506],"domain_scores_gemma":[0.9988856,0.00004557947,0.0002239428,0.0004163824,0.0003222843,0.0001062431],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002111232,0.0001790102,0.3321561,0.0007086489,0.0001493962,0.00008369229,0.001229486,8.043254e-7,0.660787,0.00003071345,0.0003835862,0.004080447],"study_design_scores_gemma":[0.001472947,0.0001998888,0.7320117,0.0002282931,0.0003101186,0.00002644858,0.0003172837,0.00004782335,0.2633041,0.00004880533,0.001842917,0.0001896734],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9866171,0.008298774,0.0001249762,0.0006343085,0.0005334977,0.0004219766,0.0000501373,0.00004184784,0.003277352],"genre_scores_gemma":[0.9930471,0.003297889,0.0002646261,0.000480043,0.0003795405,0.0001043501,0.0001358546,0.00003480848,0.002255748],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3998556,"threshold_uncertainty_score":0.6625053,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2156581417","doi":"10.1016/j.ccr.2004.06.025","title":"Targeted disruption of β1-integrin in a transgenic mouse model of human breast cancer reveals an essential role in mammary tumor induction","year":2004,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":409,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McMaster University; Royal Victoria Hospital","funders":"","keywords":"Integrin; Biology; Cancer research; Carcinogenesis; Genetically modified mouse; Mammary tumor; Transgene; Mammary gland; Breast cancer; In vivo; Cell biology; Cancer; Cell; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02247222269083678,"gpt":0.3202644528133011,"spread":0.2977922301224644,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000191622,0.0001516033,0.0003776203,0.0002756874,0.00001822524,0.000005334508,0.0001488909,0.0001134913,0.0002650817],"category_scores_gemma":[0.000006034088,0.0001486941,0.00008636765,0.0003743515,0.0000769824,0.0001834854,0.00003120377,0.0003298648,0.000001534623],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006680106,"about_ca_system_score_gemma":0.0004813889,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01519814,"about_ca_topic_score_gemma":0.007919996,"domain_scores_codex":[0.9984571,0.00007143265,0.0004883462,0.0003360774,0.0003633268,0.0002837599],"domain_scores_gemma":[0.9992924,0.000006526578,0.0001265345,0.0003116573,0.0001387361,0.0001241644],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005026304,0.0006048491,0.005746698,0.0003850973,0.00001158661,0.00000825443,0.001305541,0.01068864,0.9795159,0.00003456227,0.000009120295,0.001187141],"study_design_scores_gemma":[0.003654167,0.0001935161,0.0324153,0.0002956255,0.00002948939,0.000003950293,0.0004504279,0.004313467,0.9582357,0.0002585617,0.000002683519,0.0001471098],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981383,0.0005658178,0.0002563242,0.0001654715,0.00003782484,0.0005196296,0.00008536911,0.00001596345,0.0002153148],"genre_scores_gemma":[0.998608,0.0004666448,0.0002504587,0.00003629472,0.00006019107,0.0001106524,0.00004255947,0.0000338736,0.0003913618],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0266686,"threshold_uncertainty_score":0.9913597,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2052645281","doi":"10.1016/j.ccr.2013.08.009","title":"Xbp1s-Negative Tumor B Cells and Pre-Plasmablasts Mediate Therapeutic Proteasome Inhibitor Resistance in Multiple Myeloma","year":2013,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Multiple Myeloma Research and Treatments","field":"Medicine","cited_by":406,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre","funders":"National Cancer Institute","keywords":"Bortezomib; Proteasome inhibitor; Multiple myeloma; Endoplasmic reticulum; Proteasome; Cancer research; Plasma cell; Progenitor cell; Unfolded protein response; Biology; Antibody; Immunology; Cell biology; Stem cell","retraction":null,"screen_n_in":null,"score":{"opus":0.01708461497933192,"gpt":0.2672179697081689,"spread":0.250133354728837,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001056113,0.0002643448,0.0003752846,0.00009880545,0.00008046235,0.00004383819,0.0001028348,0.00008078921,0.0004785034],"category_scores_gemma":[0.00006674402,0.0002070996,0.00005393576,0.0002078987,0.0001602286,0.0002380003,0.00006212007,0.0002649046,0.0001595537],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003422223,"about_ca_system_score_gemma":0.0002091915,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001510739,"about_ca_topic_score_gemma":0.002747866,"domain_scores_codex":[0.99819,0.0000932265,0.000288042,0.0004860905,0.0003617832,0.0005808317],"domain_scores_gemma":[0.9988855,0.0002093461,0.0001034122,0.0003005857,0.0001301307,0.0003710204],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00473816,0.001385533,0.3876332,0.002221703,0.0003565993,0.0006089192,0.006996393,0.000019753,0.5627112,0.00002757533,0.004576533,0.0287244],"study_design_scores_gemma":[0.01107644,0.0003814753,0.5184914,0.0004726409,0.00004414536,0.000005866289,0.0003028563,0.001307881,0.4637721,0.0002734824,0.003529678,0.000341939],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905697,0.003760471,0.00000647811,0.00047839,0.0001321865,0.002884948,0.00007337455,0.00004729722,0.002047145],"genre_scores_gemma":[0.9908522,0.0005433704,0.0009903834,0.000268373,0.0001389189,0.001600691,0.00001274398,0.00004559459,0.005547687],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1308583,"threshold_uncertainty_score":0.8445275,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1966292443","doi":"10.1016/s1535-6108(03)00078-3","title":"Chemosensitivity linked to p73 function","year":2003,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":404,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Cancer Institute; National Institutes of Health; Hospital for Sick Children; Howard Hughes Medical Institute","keywords":"Mutant; Homologous recombination; Downregulation and upregulation; Apoptosis; Cancer research; DNA damage; Biology; Mutation; Function (biology); DNA; Cell biology; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01500334402784057,"gpt":0.2521144236703132,"spread":0.2371110796424726,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001049487,0.0001282675,0.0001885319,0.00003719042,0.0000425043,0.000008715225,0.00002881947,0.0001090283,0.0007964446],"category_scores_gemma":[0.00004512933,0.0001301501,0.00008106734,0.0002186265,0.00002012763,0.00003411717,0.00001364947,0.0001751346,0.0002726823],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004140611,"about_ca_system_score_gemma":0.0002303471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001555098,"about_ca_topic_score_gemma":0.00011104,"domain_scores_codex":[0.9991313,0.00002810016,0.0001282516,0.000294485,0.0001747157,0.0002431838],"domain_scores_gemma":[0.99932,0.00001284959,0.00003802787,0.0003157645,0.0001026008,0.0002107921],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002439566,0.0001199984,0.0005457607,0.00009615553,0.00004966254,0.00005437831,0.0002432064,0.0001790188,0.9614038,0.0001515561,0.02290309,0.01400936],"study_design_scores_gemma":[0.001864188,0.0002774296,0.00493311,0.00009345906,0.0001679824,0.00002572538,0.00007276496,0.00006902293,0.5073531,0.00004348634,0.4848678,0.0002319533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8209167,0.003555018,0.006399717,0.0007857521,0.0019493,0.0008091173,0.00001432259,0.0001881968,0.1653819],"genre_scores_gemma":[0.9912082,0.0001257122,0.0004725278,0.003037128,0.0002247514,0.00004721485,0.000009751186,0.00003690437,0.004837838],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4619647,"threshold_uncertainty_score":0.872051,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1999599951","doi":"10.1016/j.ccr.2009.03.027","title":"Expression of Autotaxin and Lysophosphatidic Acid Receptors Increases Mammary Tumorigenesis, Invasion, and Metastases","year":2009,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":397,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"National Cancer Institute","keywords":"Autotaxin; Lysophosphatidic acid; Receptor; Biology; Cancer research; Estrogen receptor; Carcinogenesis; Cancer; Metastasis; Breast cancer; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.00750900089875911,"gpt":0.2282318606138998,"spread":0.2207228597151407,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001135294,0.0001261971,0.0001772101,0.00002375611,0.00005390829,0.00001369472,0.00008720128,0.00006679816,0.00003348788],"category_scores_gemma":[0.00003296964,0.0001091193,0.00003493802,0.00005161031,0.00004558843,0.00001073738,0.00006549177,0.00003195988,2.59457e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005335776,"about_ca_system_score_gemma":0.00006214066,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001447268,"about_ca_topic_score_gemma":0.000008703534,"domain_scores_codex":[0.9993134,0.00004522558,0.0001639312,0.0002624977,0.00008168778,0.0001332951],"domain_scores_gemma":[0.9995762,0.00001006919,0.00009344563,0.0001827201,0.00004201478,0.00009559282],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000519135,0.000033432,0.001747158,0.00003736578,0.000007274138,0.000001287442,0.00004824113,0.000004739341,0.9908098,0.00003012659,0.001072676,0.006155968],"study_design_scores_gemma":[0.0004518012,0.0001008467,0.003847695,0.00003832149,0.00003068127,0.000003664097,0.00006186143,0.00000496953,0.9875894,0.00006341186,0.007681065,0.0001263461],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8618732,0.1375722,0.0001969986,0.00002922013,0.00009304763,0.00007851405,0.0000177362,0.000007575944,0.0001314532],"genre_scores_gemma":[0.9720882,0.02605466,0.001338776,0.0002234557,0.0001357709,0.000009609867,0.0000342885,0.000009477577,0.0001057819],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1115176,"threshold_uncertainty_score":0.4449756,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3083951977","doi":"10.1016/j.ccell.2020.08.007","title":"Nivolumab Plus Ipilimumab for Metastatic Castration-Resistant Prostate Cancer: Preliminary Analysis of Patients in the CheckMate 650 Trial","year":2020,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":393,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Janssen Biotech; National Cancer Institute; Genentech; National Institutes of Health; Bristol-Myers Squibb Canada; Ono Pharmaceutical; Parker Institute for Cancer Immunotherapy; Breast Cancer Now; Exelixis; Meso Scale Diagnostics; Sanofi; Merck; Bayer Corporation; Prostate Cancer Foundation; Bristol-Myers Squibb; AstraZeneca; American Anthropological Association; Roche; Astellas Pharma US; Amgen; University of Texas MD Anderson Cancer Center; Pfizer","keywords":"Ipilimumab; Nivolumab; Prostate cancer; Medicine; Oncology; Internal medicine; Clinical trial; Cancer; Immunotherapy","retraction":null,"screen_n_in":null,"score":{"opus":0.03752139322097603,"gpt":0.3103108764788775,"spread":0.2727894832579015,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000212574,0.0001711028,0.000528336,0.00008725794,0.00005647451,0.00001817444,0.0001536802,0.00004479571,0.0002557914],"category_scores_gemma":[0.00002614637,0.0001226226,0.0002913681,0.0007886931,0.00007119781,0.0000790858,0.00001522428,0.00009747635,7.46413e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003116129,"about_ca_system_score_gemma":0.0005049002,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003131064,"about_ca_topic_score_gemma":0.002279328,"domain_scores_codex":[0.9985245,0.00007014738,0.000555796,0.0003000685,0.0003090102,0.0002404365],"domain_scores_gemma":[0.9991747,0.00009516415,0.0002928212,0.0002346386,0.0001375255,0.00006518608],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.9219541,0.0009804635,0.006563115,0.001860227,0.003353109,0.00001917048,0.02089908,0.002304228,0.0172691,0.00001503835,0.004767225,0.02001513],"study_design_scores_gemma":[0.6201961,0.02655196,0.2006091,0.00060344,0.02343225,0.000001421327,0.01169083,0.03720836,0.03987437,0.00004409055,0.0384411,0.001346945],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901249,0.004590452,0.00004008501,0.001291692,0.0002088198,0.002731638,0.0007777437,0.00001502606,0.0002196893],"genre_scores_gemma":[0.9964629,0.001210862,0.000110669,0.0008434349,0.00009278503,0.0008316525,0.0002042963,0.00002141004,0.0002219274],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.301758,"threshold_uncertainty_score":0.5000405,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}