{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":127,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":127,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"71721dc1aecc","filters":{"venue":"Cancer Cytopathology"}},"results":[{"id":"W4235450985","doi":"10.1002/cncy.20147","title":"Biospecimen reporting for improved study quality (BRISQ)","year":2011,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Statistical Methods in Clinical Trials","field":"Mathematics","cited_by":191,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Cancer Agency","funders":"National Cancer Institute; U.S. Public Health Service; National Institutes of Health","keywords":"Medicine; Quality (philosophy); Consistency (knowledge bases); Data science; Medical physics; Computer science","retraction":null,"screen_n_in":null,"score":{"opus":0.9032678520110035,"gpt":0.6778586125422745,"spread":0.2254092394687289,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.009173804,0.0002065884,0.001063946,0.00004914518,0.00009879432,0.00001225924,0.0002947208,0.0001902977,0.000525408],"category_scores_gemma":[0.1358759,0.0001763823,0.0001824709,0.0001323703,0.0001770699,0.00004037108,0.0001419704,0.0002319869,0.000008965491],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008310012,"about_ca_system_score_gemma":0.00008694465,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008754418,"about_ca_topic_score_gemma":0.00005500115,"domain_scores_codex":[0.9953949,0.0008768084,0.002514813,0.0006516391,0.0001235132,0.0004383652],"domain_scores_gemma":[0.98602,0.01084123,0.002017333,0.0007460323,0.0002542887,0.0001210796],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.004063759,0.005888928,0.2850852,0.0009034093,0.0008320253,0.0004709793,0.01106423,5.479925e-7,0.04155178,0.3768388,0.005841225,0.2674591],"study_design_scores_gemma":[0.001867264,0.0007878745,0.0491371,0.0000179115,0.0002120369,0.00001247316,0.0004667595,0.00002067784,0.005506491,0.9414008,0.0002802533,0.0002903772],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.6948947,0.00009809386,0.2915048,0.000326086,0.003430731,0.003547267,0.0002441346,0.0003340895,0.005620065],"genre_scores_gemma":[0.2662402,0.000007955752,0.73168,0.0002996179,0.0005159689,0.0008131709,9.608879e-7,0.00005023952,0.0003918578],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.564562,"threshold_uncertainty_score":0.871403,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1514990243","doi":"10.1002/cncy.21215","title":"“The petals and thorns” of ROSE (rapid on‐site evaluation)","year":2012,"lang":"en","type":"editorial","venue":"Cancer Cytopathology","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":114,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Petal; Rose (mathematics); Medical physics; Computed tomography; Reimbursement; Radiology; General surgery; Surgery","retraction":null,"screen_n_in":null,"score":{"opus":0.02198684780549039,"gpt":0.3577725989319127,"spread":0.3357857511264223,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008849386,0.0003039075,0.0007360927,0.00008997737,0.0001172188,0.00001545241,0.0001118345,0.0004904601,0.0002794497],"category_scores_gemma":[0.0004752836,0.0001959598,0.0001451513,0.00009184267,0.0002983851,0.00003442378,0.00007074683,0.0004438923,0.0000394039],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005406981,"about_ca_system_score_gemma":0.0007873219,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007301049,"about_ca_topic_score_gemma":0.0001064869,"domain_scores_codex":[0.9979274,0.0002040373,0.0003932304,0.0004592809,0.0006557971,0.0003602251],"domain_scores_gemma":[0.9976228,0.0007924602,0.0003468852,0.0006191168,0.0004783251,0.0001403546],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003923365,0.0001618037,0.008570977,0.0002528929,0.0002329418,0.00003621673,0.000267083,0.000001445701,0.00007371416,0.000118556,0.9387568,0.05113519],"study_design_scores_gemma":[0.002412632,0.0008022172,0.01982908,0.0004008894,0.001783978,0.00002402569,0.00001557566,0.000004519496,0.0004543278,0.00008359784,0.9740109,0.0001782227],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"editorial","genre_gemma":"editorial","genre_scores_codex":[0.02706327,0.1137479,0.000002022402,0.001746834,0.8524848,0.001350666,0.0006194675,0.00003425035,0.002950803],"genre_scores_gemma":[0.08016958,0.05665394,0.00006892372,0.0003624627,0.8573558,0.002083043,0.0005396176,0.0001076819,0.00265901],"genre_candidate":"editorial","genre_consensus":"editorial","teacher_disagreement_score":0.057094,"threshold_uncertainty_score":0.7991007,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1539990701","doi":"10.1002/cncy.20150","title":"<i>EGFR</i> gene status in cytological samples of nonsmall cell lung carcinoma","year":2011,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":113,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Lung cancer; Epidermal growth factor receptor; Fluorescence in situ hybridization; Cancer; Carcinoma; Oncology; Polymerase chain reaction; Cancer research; Pathology; Internal medicine; Gene; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.07489019474961393,"gpt":0.3811306723359568,"spread":0.3062404775863429,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001251838,0.000466173,0.002559621,0.0003487199,0.00003632784,0.000005332789,0.0001948338,0.0005235182,0.0004033913],"category_scores_gemma":[0.00003946382,0.0003088787,0.0004126817,0.0003493417,0.0002163782,0.00003628935,0.0001046412,0.0004530112,0.00002536201],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007402814,"about_ca_system_score_gemma":0.001851015,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007904632,"about_ca_topic_score_gemma":0.0001723057,"domain_scores_codex":[0.9975846,0.0001975795,0.0008413631,0.0006649037,0.0001144016,0.0005971665],"domain_scores_gemma":[0.9985578,0.0001261866,0.0004506612,0.0005566076,0.0001182226,0.0001905067],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001920705,0.001010081,0.1149183,0.03146883,0.0003709354,0.002652032,0.001466465,0.000002171576,0.00008954557,0.0008736489,0.001069935,0.8458859],"study_design_scores_gemma":[0.001903993,0.0004498467,0.00939069,0.002787272,0.003937028,0.0004896114,0.00004370608,0.000001029279,0.00007955731,0.00003564178,0.9804999,0.0003817753],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002525594,0.9903728,0.00005911722,0.00002753583,0.0004629651,0.001279525,0.000661532,0.00003426142,0.004576611],"genre_scores_gemma":[0.005021622,0.9914859,0.001199778,0.0001463256,0.0001759508,0.0008158634,0.0004160052,0.00006989024,0.000668665],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9794299,"threshold_uncertainty_score":0.9999363,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2518830001","doi":"10.1002/cncy.21765","title":"Algorithmic approach to neuroendocrine tumors in targeted biopsies: Practical applications of immunohistochemical markers","year":2016,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"","keywords":"Immunohistochemistry; Medicine; Neuroendocrine tumors; Pathology; Neuroendocrine differentiation; Proliferation Marker; Cancer; Neoplasm; Internal medicine; Prostate cancer","retraction":null,"screen_n_in":null,"score":{"opus":0.04336395877735576,"gpt":0.4150926696927494,"spread":0.3717287109153937,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002086199,0.0006012522,0.002948634,0.001044832,0.00003928184,0.000008937738,0.0005319404,0.0000641615,0.0001524744],"category_scores_gemma":[0.0009219535,0.0004632235,0.000409876,0.001324094,0.0005786779,0.00007091038,0.000391315,0.001192244,0.00009877343],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006616513,"about_ca_system_score_gemma":0.001417478,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000367155,"about_ca_topic_score_gemma":0.000002800746,"domain_scores_codex":[0.9956654,0.0004216095,0.001296079,0.001202787,0.0004417646,0.0009723323],"domain_scores_gemma":[0.9973646,0.0004669323,0.0004633699,0.001122316,0.0001757014,0.0004070395],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007799278,0.00117058,0.000158071,0.03276729,0.0001809201,0.01048372,0.00004214975,0.000002131715,0.00222462,0.000592098,0.003648357,0.9479501],"study_design_scores_gemma":[0.0009580183,0.0003894393,0.00004659862,0.004216759,0.0002530641,0.01743232,0.00003478772,0.000004089601,0.0002612421,0.00003595423,0.9759744,0.0003933212],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001055716,0.9909781,0.0004717485,0.0006499887,0.0001826995,0.004949921,0.0003049975,0.00008896492,0.002268064],"genre_scores_gemma":[0.0002491651,0.9853895,0.00459288,0.0001636194,0.0002786416,0.008134935,0.0001327469,0.0001514636,0.0009070664],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.972326,"threshold_uncertainty_score":0.999782,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2610732323","doi":"10.1002/cncy.21868","title":"Consistency and reproducibility of next‐generation sequencing and other multigene mutational assays: A worldwide ring trial study on quantitative cytological molecular reference specimens","year":2017,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network","funders":"Public Health Agency","keywords":"Medicine; Reproducibility; Computational biology; Consistency (knowledge bases); DNA sequencing; Medical physics; Molecular diagnostics; Bioinformatics; Oncology; Genetics; Biology; DNA; Chromatography; Artificial intelligence","retraction":null,"screen_n_in":null,"score":{"opus":0.2648634268306701,"gpt":0.4402387328564022,"spread":0.1753753060257321,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005165991,0.0001363984,0.0003723027,0.00006636053,0.0002165756,0.00002680203,0.00005226514,0.00006730703,0.00002942614],"category_scores_gemma":[0.0009334816,0.0001089227,0.00003275817,0.00003904826,0.0003162521,0.00007355789,0.00004561537,0.0001230019,0.000001232531],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001409385,"about_ca_system_score_gemma":0.0002076087,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004151281,"about_ca_topic_score_gemma":0.0003736388,"domain_scores_codex":[0.9984969,0.0001591017,0.0003060019,0.0007654048,0.0001347883,0.0001377416],"domain_scores_gemma":[0.9987662,0.0001003973,0.000252291,0.0006629627,0.0001537733,0.00006432083],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.009321061,0.001048161,0.4266561,0.00008717935,0.0004297431,0.0007203282,0.008137329,0.0001260065,0.5309732,0.01430992,0.00001890399,0.00817207],"study_design_scores_gemma":[0.03104699,0.005183021,0.9413658,0.0001184015,0.0005911963,0.0001173337,0.002156065,0.0004925454,0.01777742,0.000835242,0.00007903449,0.0002369378],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961643,0.0006693025,0.0001771181,0.0004127118,0.0002211388,0.001015798,0.00004611024,0.00001511884,0.001278409],"genre_scores_gemma":[0.9976708,0.00003078635,0.001734972,0.0001903901,0.00008918064,0.0001751048,0.00001104291,0.00001075263,0.00008700754],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5147097,"threshold_uncertainty_score":0.444174,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2604146792","doi":"10.1002/cncy.21859","title":"Cytologic features and clinical implications of undifferentiated carcinoma with osteoclastic giant cells of the pancreas: An analysis of 15 cases","year":2017,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Giant cell; Pathology; Medicine; CD68; Fine-needle aspiration; Intraductal papillary mucinous neoplasm; Pancreas; Carcinoma; Neoplasm; Cytopathology; Adenocarcinoma; Cytology; Cancer; Biopsy; Immunohistochemistry; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.06797298865484121,"gpt":0.4072434852045275,"spread":0.3392704965496863,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002777949,0.0001122337,0.001025473,0.0001359688,0.0001116645,0.000004174711,0.0002489144,0.0001643952,0.00005881712],"category_scores_gemma":[0.0003705812,0.00006362127,0.0001255938,0.0001816586,0.001838592,0.00002773611,0.0001086056,0.0001850946,2.898815e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002829319,"about_ca_system_score_gemma":0.0003421009,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001156666,"about_ca_topic_score_gemma":0.003034609,"domain_scores_codex":[0.9987638,0.0002535461,0.0004064082,0.000267804,0.0001248063,0.0001836405],"domain_scores_gemma":[0.9977643,0.0004163758,0.0005332399,0.0008993442,0.0002867263,0.0001000056],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004850959,0.0001858913,0.9764889,0.00007656997,0.000465513,0.00003658479,0.0001432814,0.000003861419,0.02122651,0.0003077989,0.00002596676,0.0005540049],"study_design_scores_gemma":[0.001133863,0.001265839,0.9882582,0.00005121325,0.005044145,0.0001584934,0.0001414167,0.0002120975,0.003602667,0.00007253675,0.000003776169,0.00005576331],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980037,0.0005053741,0.00008778414,0.0006273163,0.0000516634,0.0003018184,0.0001704123,0.00000536732,0.0002466155],"genre_scores_gemma":[0.9992009,0.0002886217,0.0002739718,0.0000536022,0.00002707327,0.00002782994,0.00001430619,0.000007868437,0.0001057975],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01762384,"threshold_uncertainty_score":0.6774369,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2624808061","doi":"10.1002/cncy.21850","title":"Preanalytic specimen triage: Smears, cell blocks, cytospin preparations, transport media, and cytobanking","year":2017,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Context (archaeology); Medicine; Cytology; Triage; Pathology; Biology; Emergency medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.05480858662277399,"gpt":0.3502877293345076,"spread":0.2954791427117336,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003546998,0.0005922139,0.00156024,0.000141496,0.0002250815,0.0000714987,0.0005973234,0.0007670733,0.00007527698],"category_scores_gemma":[0.0001411383,0.0005795367,0.0004038872,0.00008320971,0.0002862389,0.000006733796,0.0002279756,0.0003656142,0.00001525548],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001161471,"about_ca_system_score_gemma":0.001145072,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008234794,"about_ca_topic_score_gemma":0.000592189,"domain_scores_codex":[0.9973771,0.0001258506,0.0007291659,0.001111184,0.0001495754,0.0005071408],"domain_scores_gemma":[0.9977832,0.00008042628,0.0006655005,0.001189699,0.00008756809,0.0001935347],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001097481,0.0001460506,0.0007927055,0.004655927,0.0003787435,0.0003368378,0.0002313552,0.00002904367,0.0006413367,0.0001326416,0.007773551,0.9847721],"study_design_scores_gemma":[0.0006346165,0.0001586134,0.0001488595,0.0007731452,0.001210163,0.0001572622,0.000007912127,0.000002649563,0.0002344044,0.00007350078,0.9959921,0.000606805],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001309694,0.9944133,0.0001779988,0.00004223433,0.0008286714,0.0008376705,0.0008654614,0.00001908702,0.001505911],"genre_scores_gemma":[0.001572611,0.9932793,0.0002828847,0.0001065416,0.001708025,0.0003846286,0.001025744,0.0001028593,0.001537396],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9882185,"threshold_uncertainty_score":0.9996656,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2777881468","doi":"10.1002/cncy.21958","title":"Implementing The Paris System for Reporting Urinary Cytology results in a decrease in the rate of the “atypical” category and an increase in its prediction of subsequent high‐grade urothelial carcinoma","year":2017,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Medicine; Urothelial carcinoma; Urinary system; Cytology; Biopsy; Internal medicine; Predictive value; Gastroenterology; Cancer; Bladder cancer; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.05602347868585238,"gpt":0.340588266840599,"spread":0.2845647881547466,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002388959,0.000161369,0.000498842,0.0001013106,0.0001823714,0.000011013,0.0002608293,0.0001246857,0.000003565958],"category_scores_gemma":[0.0008675483,0.00009070474,0.00006987363,0.0001157521,0.0002622675,0.00007578362,0.0001211112,0.0002450065,1.155242e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001671684,"about_ca_system_score_gemma":0.0004129956,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01324289,"about_ca_topic_score_gemma":0.005207906,"domain_scores_codex":[0.9974779,0.0005930953,0.00108458,0.0003706503,0.0001094884,0.0003642745],"domain_scores_gemma":[0.9978547,0.0001885554,0.001111417,0.0007030953,0.0000839932,0.00005822943],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002690589,0.0002042025,0.9823724,0.0002145027,0.00001900136,0.0003530611,0.002571915,0.00001377921,0.01021458,0.0005408641,0.00001696557,0.0007881246],"study_design_scores_gemma":[0.006168906,0.0005541139,0.9824933,0.0001887531,0.0001314031,0.0004026504,0.001074913,0.000267881,0.008342825,0.0002500015,0.00006011342,0.00006515148],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953464,0.0007278366,0.000009908212,0.001767464,0.000218988,0.001564404,0.0002136708,0.000007633686,0.0001437259],"genre_scores_gemma":[0.9988635,0.00008817199,0.00002951252,0.0001787953,0.0001456728,0.0006426998,0.00002059826,0.00001680456,0.00001421293],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008034986,"threshold_uncertainty_score":0.993328,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1645070058","doi":"10.1002/cncy.21297","title":"Pooled analysis of the performance of liquid‐based cytology in population‐based cervical cancer screening studies in China","year":2013,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Juravinski Hospital","funders":"Fogarty International Center","keywords":"Medicine; Cervical cancer; Liquid-based cytology; Cytology; Cancer; China; Cervical cancer screening; Gynecology; Population; Chinese population; Obstetrics; Oncology; Internal medicine; Pathology; Environmental health","retraction":null,"screen_n_in":null,"score":{"opus":0.05380353812557488,"gpt":0.3854013214289789,"spread":0.331597783303404,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003661041,0.0001680182,0.001027964,0.0007696471,0.00004034334,0.000002734331,0.0002327147,0.000164197,0.002047012],"category_scores_gemma":[0.0001752269,0.0001194017,0.000192566,0.002242867,0.0003566502,0.00005705184,0.0001041361,0.0004016642,0.000001918474],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003069998,"about_ca_system_score_gemma":0.0003182774,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008405115,"about_ca_topic_score_gemma":0.01092241,"domain_scores_codex":[0.9980507,0.000249395,0.0006451573,0.0003467693,0.0003102876,0.0003977197],"domain_scores_gemma":[0.9988292,0.000171843,0.0001935342,0.0004199389,0.0003142485,0.00007121409],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008627618,0.0001074868,0.9764614,0.0003685162,0.0001663271,0.000009875171,0.0003239473,0.01474875,0.002823074,0.00002632176,0.00001562575,0.004085955],"study_design_scores_gemma":[0.001930323,0.0002960065,0.9604765,0.0001330056,0.0004258214,0.000002027935,0.00007731387,0.03199128,0.004539722,0.00001512768,0.00001314735,0.00009969479],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937052,0.002546506,0.00003173508,0.002876058,0.0001236766,0.0004820074,0.00002718535,0.00001088959,0.0001967398],"genre_scores_gemma":[0.9983703,0.0002366012,0.0001571099,0.0007385105,0.00005326057,0.0003677266,0.00001770607,0.00001570017,0.00004309023],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01724253,"threshold_uncertainty_score":0.9988652,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2943123810","doi":"10.1002/cncy.22135","title":"Application of the Milan System for Reporting Submandibular Gland Cytopathology: An international, multi‐institutional study","year":2019,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"National Cancer Institute","keywords":"Medicine; Cytopathology; Atypia; Malignancy; Submandibular gland; Salivary gland; Fine-needle aspiration; Pathology; Cytology; Radiology; Biopsy","retraction":null,"screen_n_in":null,"score":{"opus":0.03971116333142184,"gpt":0.3518556479501291,"spread":0.3121444846187073,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004467852,0.0001378217,0.0004058488,0.00006709385,0.00008776555,0.000006687782,0.0001488886,0.00007603177,0.00001662317],"category_scores_gemma":[0.00009556663,0.00008562472,0.0001137038,0.00008682458,0.00007028275,0.00005426118,0.00004781197,0.00008703036,0.000006399229],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001691913,"about_ca_system_score_gemma":0.0001114306,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001323632,"about_ca_topic_score_gemma":0.00007176107,"domain_scores_codex":[0.9986423,0.00006722361,0.0005893652,0.0003865225,0.0001539329,0.0001606905],"domain_scores_gemma":[0.9986325,0.00004195002,0.0006117853,0.0004817348,0.0001829886,0.0000490342],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001729959,0.0005859563,0.9943829,0.00008758815,0.00006013537,0.0000843226,0.0002911388,0.000116843,0.002887999,0.0007992031,0.000009344746,0.0005215371],"study_design_scores_gemma":[0.003547975,0.0005122296,0.9901522,0.00006850297,0.0001908366,0.0005770396,0.0003308098,0.0009509714,0.00306635,0.00001862592,0.0005025122,0.00008191099],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953724,0.0002359717,0.0009097988,0.0002485263,0.001012254,0.001886609,0.00007544903,0.0000386893,0.0002203037],"genre_scores_gemma":[0.9981614,0.00001531397,0.00045706,0.0001223333,0.0002091181,0.0008417202,0.00009355236,0.00001570914,0.00008383707],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0042307,"threshold_uncertainty_score":0.3491675,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3162760820","doi":"10.1002/cncy.22443","title":"A deep learning system to diagnose the malignant potential of urothelial carcinoma cells in cytology specimens","year":2021,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Innovation Cluster (Canada)","funders":"Japan Society for the Promotion of Science","keywords":"Medicine; Cytopathology; Cytology; Urine cytology; Papanicolaou stain; Medical diagnosis; High-power field; Pathology; Artificial intelligence; Radiology; Cancer; Internal medicine; Bladder cancer; Computer science; Cervical cancer; Immunohistochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.009160045762441239,"gpt":0.2346962189715513,"spread":0.2255361732091101,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000359499,0.0001634303,0.0003623633,0.0001489687,0.00009977091,0.00002941827,0.0006448864,0.0001286907,0.00003663323],"category_scores_gemma":[0.00004928288,0.000141499,0.0000850112,0.0006165177,0.0001047353,0.00008997088,0.0004417981,0.0003048094,0.00003182941],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003406308,"about_ca_system_score_gemma":0.0002507191,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002767228,"about_ca_topic_score_gemma":0.0006451263,"domain_scores_codex":[0.9978147,0.0005702795,0.000393199,0.0005976844,0.0001889727,0.0004351838],"domain_scores_gemma":[0.9988881,0.0001299645,0.0001648047,0.0005976527,0.0001478141,0.00007171411],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002356061,0.0003938853,0.0396496,0.0002681643,0.00004994053,0.008904321,0.01178286,0.0617221,0.7967253,0.02014034,0.0003621461,0.0597657],"study_design_scores_gemma":[0.00548591,0.00116682,0.120816,0.0002678014,0.00009087696,0.003827268,0.002772464,0.07629815,0.7763604,0.0006646881,0.01126697,0.0009826771],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7952157,0.001033509,0.1986671,0.001305743,0.003009403,0.0002908285,0.000008598717,0.0000704765,0.0003985995],"genre_scores_gemma":[0.9968324,0.00007801287,0.002159582,0.0003412136,0.0002807954,0.00017631,9.247926e-7,0.00001712071,0.0001136601],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2016167,"threshold_uncertainty_score":0.5770161,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2121918097","doi":"10.1002/cncy.20177","title":"Comparison of ThinPrep and SurePath liquid‐based cytology and subsequent human papillomavirus DNA testing in China","year":2011,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Liquid-based cytology; Cytology; Gynecology; Cervical cancer screening; Hybrid capture; Human papillomavirus; Cervical cancer; Internal medicine; Oncology; Cervical intraepithelial neoplasia; Cancer; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.1595039652913944,"gpt":0.415834129710024,"spread":0.2563301644186297,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003990346,0.000158461,0.0006788855,0.0001885417,0.00006151987,0.000004315867,0.00009104569,0.0001716975,0.000446173],"category_scores_gemma":[0.0001580519,0.0001400221,0.00004400659,0.0002094316,0.0005113166,0.00003642259,0.0001070102,0.0003663008,0.000001346911],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008384337,"about_ca_system_score_gemma":0.0001625129,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001859129,"about_ca_topic_score_gemma":0.00125459,"domain_scores_codex":[0.9985332,0.0001460013,0.0004091549,0.0004062168,0.000143502,0.0003619095],"domain_scores_gemma":[0.9992591,0.00009469812,0.0001135021,0.0002590003,0.0001185024,0.0001552073],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001141964,0.0001728497,0.9382574,0.0002949834,0.00001257282,0.0002299325,0.001750855,0.000002853123,0.04966583,0.0003661029,0.00001468704,0.008089937],"study_design_scores_gemma":[0.00198221,0.002202364,0.9678696,0.0000576859,0.00005351187,0.00009704367,0.0001115065,0.0002672517,0.02683766,0.0003266037,0.00006833073,0.0001261803],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9886113,0.004195255,0.00004036234,0.0001809274,0.00006940227,0.0002995257,0.00001222397,0.00003155682,0.006559451],"genre_scores_gemma":[0.9991103,0.0001195766,0.000379347,0.0002140755,0.00005863305,0.00006533177,0.000007038002,0.00001973097,0.00002596693],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02961222,"threshold_uncertainty_score":0.5709937,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2127386691","doi":"10.1002/cncy.21596","title":"HPV DNA testing with cytology triage in cervical cancer screening: Influence of revealing HPV infection status","year":2015,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Université de Montréal; St. John’s Health Sciences Centre; Memorial University of Newfoundland; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Triage; Cervical cancer; Dna testing; Cytology; Cervical cancer screening; Colposcopy; Cancer; Oncology; Cancer screening; Papillomaviridae; HPV infection; Gynecology; Obstetrics; Internal medicine; Pathology; Medical emergency; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.1043595400284903,"gpt":0.3886679480413424,"spread":0.2843084080128521,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006662646,0.0002345684,0.0007993216,0.0003616289,0.00005311507,0.00001094243,0.0001376188,0.000255953,0.0005804489],"category_scores_gemma":[0.0009785198,0.0001969333,0.0000588577,0.001107848,0.0003944874,0.0001312959,0.0001255831,0.00071532,0.000006713921],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005367265,"about_ca_system_score_gemma":0.001326363,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01190725,"about_ca_topic_score_gemma":0.006107208,"domain_scores_codex":[0.9974748,0.0002351379,0.000564167,0.0005464852,0.0004106064,0.0007687801],"domain_scores_gemma":[0.9979774,0.0002360725,0.0002019638,0.0003606993,0.0008286585,0.0003951541],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002578128,0.00009919328,0.92747,0.0002857439,0.00002735986,0.0002992488,0.0005860281,0.00354238,0.003130459,0.00007245206,0.00007230032,0.06183667],"study_design_scores_gemma":[0.005697333,0.001251934,0.9870161,0.0001277667,0.00008237088,0.000196228,0.0001135792,0.0005494384,0.00321069,0.0001339143,0.001414699,0.0002059146],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913307,0.001846525,0.0004565854,0.0008247402,0.0001548995,0.0005201339,0.00002985465,0.00006435198,0.004772226],"genre_scores_gemma":[0.9972839,0.0003475517,0.001017795,0.0006161108,0.0003098495,0.0002734732,0.00001426194,0.00004014035,0.00009685659],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06163076,"threshold_uncertainty_score":0.9946725,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3012682099","doi":"10.1002/cncy.22266","title":"Sensitivity of cervico‐vaginal cytology in endometrial carcinoma: A systematic review and meta‐analysis","year":2020,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"Instituto de Salud Carlos III; Centro de Investigación Biomédica en Red de Cáncer","keywords":"Medicine; Endometrial cancer; Gynecology; Carcinoma; Lymphovascular invasion; Cervical cancer; Papanicolaou stain; Pap test; Cytology; Oncology; Cervix; Stage (stratigraphy); Cancer; Internal medicine; Obstetrics; Metastasis; Pathology; Cervical cancer screening","retraction":null,"screen_n_in":null,"score":{"opus":0.0887847557756675,"gpt":0.3792826233775256,"spread":0.290497867601858,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.001077657,0.0006961372,0.02310066,0.001295793,0.00002774716,0.000007387431,0.0001750122,0.0004559639,0.0003540172],"category_scores_gemma":[0.0009260396,0.0004682613,0.002531105,0.004262638,0.0002109303,0.00003963912,0.0001908615,0.0006327313,0.00001603066],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003399113,"about_ca_system_score_gemma":0.0005310962,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000569294,"about_ca_topic_score_gemma":0.0002716927,"domain_scores_codex":[0.9942189,0.002286575,0.001782833,0.0009651273,0.0003019957,0.0004445461],"domain_scores_gemma":[0.9965581,0.001309096,0.001067683,0.0006476363,0.00015615,0.0002613915],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.00009754646,0.0001165763,0.0003344366,0.9382246,0.05339492,0.002138776,0.00003737224,1.623517e-7,9.130619e-7,0.0000501614,0.000009077739,0.005595464],"study_design_scores_gemma":[0.001663515,0.0003725899,0.0001109978,0.01512234,0.9744099,0.001120192,0.000006979806,0.000001572011,0.000002496104,0.00001193618,0.006869309,0.0003081964],"study_design_candidate":"meta_analysis","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00001872472,0.9949829,0.00003257236,0.000492267,0.0001307808,0.003641853,0.0005531271,0.00002653119,0.0001212559],"genre_scores_gemma":[0.003571497,0.9936613,0.00008701669,0.0007938658,0.0001182869,0.001535654,0.0001171976,0.00004789594,0.00006724845],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9231023,"threshold_uncertainty_score":0.9997769,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1740754789","doi":"10.1002/cncy.20098","title":"Targeted use of fluorescence in situ hybridization (FISH) in cytospin preparations","year":2010,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Fluorescence in situ hybridization; Subtyping; Medicine; Pathology; Chromosomal translocation; Immunophenotyping; Lymphoma; Gene rearrangement; Follicular lymphoma; Cytology; Biology; Immunology; Gene; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.02248059641368651,"gpt":0.3020537568230414,"spread":0.2795731604093549,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008187319,0.00009301631,0.0002590879,0.0001583067,0.00001480741,0.000005070096,0.00004508363,0.00009599585,0.00007069196],"category_scores_gemma":[0.0001687972,0.0000848799,0.00003374686,0.0002584466,0.0000817023,0.00009465959,0.00002239837,0.0001148255,0.000006449458],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001171071,"about_ca_system_score_gemma":0.0002006416,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00043177,"about_ca_topic_score_gemma":0.005211618,"domain_scores_codex":[0.9992075,0.00004193539,0.0002750632,0.0002300402,0.00007886699,0.0001666015],"domain_scores_gemma":[0.9995169,0.00004892691,0.00007738759,0.0002373386,0.00007167473,0.00004775598],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007341795,0.0003120278,0.7217394,0.00001689338,0.000004599777,0.0001559606,0.0003129749,0.00006377101,0.2746753,0.0004387978,0.0002192606,0.001987607],"study_design_scores_gemma":[0.001440089,0.0001099888,0.8681605,0.0000495488,0.00001972609,0.00004327373,0.00001376972,0.0001568024,0.1291871,0.00003619965,0.0007216076,0.00006138664],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982818,0.0001094892,0.00003133017,0.000645583,0.000217142,0.0003613401,0.00002497451,0.00001675978,0.0003116268],"genre_scores_gemma":[0.9977968,0.0001893666,0.001346111,0.0003045727,0.00004314296,0.0001953265,0.00005258543,0.000009416295,0.00006267477],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1464211,"threshold_uncertainty_score":0.3461302,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2117026167","doi":"10.1002/cncy.21475","title":"Morphological parameters able to predict <scp><i>BRAF<sup>V600E</sup></i></scp>‐mutated malignancies on thyroid fine‐needle aspiration cytology: Our institutional experience","year":2014,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Cytology; Fine-needle aspiration; Thyroid; Thyroid cancer; Pathology; Internal medicine; Biopsy","retraction":null,"screen_n_in":null,"score":{"opus":0.02832972121317133,"gpt":0.2869468335760306,"spread":0.2586171123628592,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002935817,0.0004809793,0.0008081475,0.0002518415,0.0002732899,0.00004267236,0.0002732089,0.0003535458,0.00009247883],"category_scores_gemma":[0.0006693216,0.0003951409,0.0001845031,0.0004335413,0.0003018538,0.0001516794,0.0001176488,0.0003762871,0.0003083579],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005257184,"about_ca_system_score_gemma":0.0002912415,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001386635,"about_ca_topic_score_gemma":0.00005212517,"domain_scores_codex":[0.9969221,0.0002054355,0.0005570595,0.00106081,0.0004146126,0.0008399332],"domain_scores_gemma":[0.9983759,0.000193555,0.0001852377,0.0006301636,0.0002006127,0.0004145536],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001887851,0.003589513,0.5836498,0.0002740936,0.0004767368,0.005379144,0.009687439,0.1402313,0.1200669,0.01128323,0.09023963,0.03323431],"study_design_scores_gemma":[0.01824652,0.02903056,0.6654422,0.0009245274,0.0008138147,0.004426959,0.002899513,0.00584988,0.1809531,0.001123798,0.08905157,0.001237546],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901311,0.0009585765,0.001730143,0.003153797,0.0006999024,0.0009318108,0.0001272469,0.0002467181,0.002020656],"genre_scores_gemma":[0.9866257,0.0001741207,0.001664547,0.008235681,0.0004385424,0.002042126,0.0001430662,0.00004422462,0.0006319903],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1343814,"threshold_uncertainty_score":0.99985,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1989170383","doi":"10.1002/cncy.20102","title":"Detection of <i>EGFR</i> and <i>KRAS</i> mutations in fine‐needle aspirates stored on Whatman FTA cards","year":2010,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto; University Health Network","funders":"","keywords":"Medicine; KRAS; Pathology; Internal medicine; Cancer; Colorectal cancer","retraction":null,"screen_n_in":null,"score":{"opus":0.01068912206643874,"gpt":0.3124481267611393,"spread":0.3017590046947006,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007805571,0.0001176892,0.0002562599,0.0001512068,0.00005290108,0.000006926253,0.00003696362,0.000109441,0.00005705459],"category_scores_gemma":[0.00004769533,0.0001023539,0.00003551671,0.0001810689,0.0001422237,0.00006455336,0.00001425001,0.0002087346,0.000005613831],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009065316,"about_ca_system_score_gemma":0.0001348858,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004805963,"about_ca_topic_score_gemma":0.0032088,"domain_scores_codex":[0.9992836,0.00002801014,0.0001994121,0.0002395685,0.00008588802,0.0001635289],"domain_scores_gemma":[0.9995171,0.00004580648,0.00007926661,0.0001935739,0.00009547469,0.00006882384],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002735536,0.0004602152,0.1621499,0.0001239531,0.00008026099,0.0001264933,0.002416327,0.0001051444,0.7678388,0.0006632383,0.0003552546,0.06540679],"study_design_scores_gemma":[0.01008326,0.002145011,0.7454228,0.0001913734,0.0006104909,0.0003826578,0.0006380286,0.0001958479,0.2231539,0.0007708659,0.0160279,0.0003779129],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954125,0.0006111744,0.00003020189,0.000783321,0.0005392572,0.0003208712,0.00006190029,0.00002848309,0.002212262],"genre_scores_gemma":[0.9985955,0.0000823816,0.0001573728,0.0004589678,0.0001134439,0.0001907631,0.00004079329,0.00001752124,0.0003432295],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5832728,"threshold_uncertainty_score":0.417387,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2484476528","doi":"10.1002/cncy.21750","title":"Pediatric thyroid FNA biopsy: Outcomes and impact on management over 24 years at a tertiary care center","year":2016,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Medicine; Malignancy; Thyroid nodules; Fine-needle aspiration; Thyroid cancer; Biopsy; Thyroid; Thyroidectomy; Cytopathology; Histopathology; Retrospective cohort study; Radiology; General surgery; Cytology; Surgery; Pathology; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.00925416564594473,"gpt":0.2902984456435952,"spread":0.2810442799976505,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004361035,0.0002513474,0.0003680571,0.000166892,0.00004870267,0.000009317035,0.0000719591,0.00009513731,0.0003679622],"category_scores_gemma":[0.000005685267,0.0001430294,0.0001525093,0.00008211339,0.00007491183,0.00004324425,0.0001215756,0.00007700583,0.0001020565],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007462263,"about_ca_system_score_gemma":0.00004041695,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003925899,"about_ca_topic_score_gemma":0.00002269344,"domain_scores_codex":[0.9987363,0.00003727035,0.0001922779,0.0004889785,0.0001652523,0.0003799731],"domain_scores_gemma":[0.9992912,0.00004348521,0.00007626183,0.0003894719,0.00002780925,0.0001717431],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000222054,0.0001240239,0.9754993,0.00005963596,0.0001032365,0.0009422718,0.0002290149,6.940699e-7,0.0005546694,0.00004468748,0.005066921,0.01715346],"study_design_scores_gemma":[0.00530381,0.0004392838,0.9901651,0.0000743257,0.0002577163,0.0001187193,0.00003434595,2.639292e-7,0.0003334118,0.00002409318,0.00308368,0.000165252],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9892647,0.007403262,0.00000521474,0.001442259,0.000529482,0.0004221246,0.000216768,0.00005604027,0.0006601779],"genre_scores_gemma":[0.9908605,0.006107954,0.00005173978,0.001451141,0.0002402732,0.0002458803,0.00001636162,0.00003785496,0.00098835],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0169882,"threshold_uncertainty_score":0.5832568,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2106177025","doi":"10.1002/cncy.21391","title":"Hürthle cells in fine‐needle aspirates of the thyroid: A review of their diagnostic criteria and significance","year":2014,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Medicine; Malignancy; Atypia; Clinical significance; Pathology; Thyroid cancer; Thyroid; Cancer; Radiology; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.03367755591525028,"gpt":0.3404041213554769,"spread":0.3067265654402266,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004241954,0.0004489882,0.003447933,0.0001258039,0.00002536299,0.000004641838,0.0002674561,0.0002383947,0.0001473543],"category_scores_gemma":[0.0002863388,0.0002605449,0.0004330013,0.0004060756,0.000340999,0.00002373834,0.0001378391,0.000328022,0.000005360143],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001601242,"about_ca_system_score_gemma":0.0005255342,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001254596,"about_ca_topic_score_gemma":0.00008811125,"domain_scores_codex":[0.997532,0.0004257777,0.001050652,0.0005312878,0.0001555461,0.0003047078],"domain_scores_gemma":[0.9973397,0.000843073,0.0008301173,0.0007874555,0.0001184332,0.0000812176],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002576947,0.0003364996,0.002763734,0.3180137,0.0001635239,0.00007319462,0.0001787026,9.718307e-7,0.0002441705,0.0001508046,0.003899594,0.6741494],"study_design_scores_gemma":[0.0009476943,0.00062073,0.002132785,0.2825409,0.001961269,0.0001126649,0.00001314811,9.92848e-7,0.001065286,0.00006548846,0.7102333,0.0003056917],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00113864,0.9954922,0.000002413725,0.0003332151,0.0004016175,0.001980625,0.0003991823,0.00001045544,0.000241663],"genre_scores_gemma":[0.003018722,0.994675,0.00004101293,0.0005733623,0.0001457723,0.001384092,0.00002922802,0.00005197769,0.00008076704],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7063337,"threshold_uncertainty_score":0.9999847,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1501787232","doi":"10.1002/cncy.20121","title":"Fine‐needle aspiration of renal and extrarenal rhabdoid tumors","year":2010,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Medicine; Fine-needle aspiration; Pathology; Fluorescence in situ hybridization; Comparative genomic hybridization; Cytopathology; SMARCB1; Cytology; Metastasis; Karyotype; Cancer; Chromosome; Biopsy; Internal medicine; Biology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.008114528591069354,"gpt":0.2598868597643441,"spread":0.2517723311732747,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001152553,0.00009750712,0.0001360455,0.00003029329,0.00003876732,0.000005871696,0.00008590038,0.000136669,0.00006830338],"category_scores_gemma":[0.00004244425,0.00009206003,0.00003992906,0.00004241792,0.0001509212,0.000002947308,0.00004718418,0.0001166998,0.000001466758],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005203672,"about_ca_system_score_gemma":0.0001039295,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002845021,"about_ca_topic_score_gemma":0.0002553608,"domain_scores_codex":[0.999359,0.00002378531,0.0001763082,0.0002400422,0.0000593382,0.0001414968],"domain_scores_gemma":[0.9995875,0.000005882681,0.00008691275,0.0001999955,0.00007211621,0.00004757654],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003906227,0.00001401213,0.00531634,0.00001764265,0.000006420489,0.000002991538,0.00005352621,0.0001029667,0.978515,0.000127903,0.0002840225,0.01552005],"study_design_scores_gemma":[0.0007767799,0.0004258354,0.02022419,0.00002756613,0.00002595805,0.0001881913,0.00003080519,0.0004981013,0.9695994,0.0003439262,0.007630842,0.0002283573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964378,0.001096146,0.001291705,0.00009235673,0.0002458004,0.00006578073,0.00002677692,0.000008966962,0.0007347084],"genre_scores_gemma":[0.9983366,0.0000612546,0.0008351106,0.00011859,0.0003383356,0.00002634547,0.00003034761,0.00001275625,0.0002406214],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0152917,"threshold_uncertainty_score":0.3754099,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2995159341","doi":"10.1002/cncy.22221","title":"Usefulness of methylthioadenosine phosphorylase and BRCA‐associated protein 1 immunohistochemistry in the diagnosis of malignant mesothelioma in effusion cytology specimens","year":2019,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"University of British Columbia","keywords":"Medicine; Mesothelioma; Pathology; Cytology; Effusion; Immunohistochemistry; Staining; Atypia; Malignancy; Surgery","retraction":null,"screen_n_in":null,"score":{"opus":0.01401965103981052,"gpt":0.2745052729009144,"spread":0.2604856218611039,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002323648,0.0001166118,0.0004064359,0.00009447519,0.00001349807,0.000001281702,0.00009198025,0.0001175374,0.0002883196],"category_scores_gemma":[0.00007967721,0.00008662329,0.00004772675,0.0001945058,0.0002192233,0.0000249114,0.00005541597,0.0001345524,0.000003742877],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001218999,"about_ca_system_score_gemma":0.00005964291,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003140598,"about_ca_topic_score_gemma":0.0000312532,"domain_scores_codex":[0.9990203,0.000119285,0.0003284155,0.0002245155,0.0001436691,0.0001637895],"domain_scores_gemma":[0.9994683,0.0001143507,0.0001599243,0.0002036016,0.00002410939,0.00002974363],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004143884,0.0003297428,0.604207,0.0001444328,0.00001076272,0.00007663216,0.000326804,0.000007429483,0.3940353,0.00006142614,0.00001857732,0.0003675196],"study_design_scores_gemma":[0.001571072,0.0002470672,0.7913396,0.0002562862,0.00004039701,0.00002870442,0.0001933829,0.000009970442,0.2061114,0.00009563159,0.00003947844,0.00006700477],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994421,0.004210754,0.000001036698,0.0005480815,0.00004724232,0.0005376938,0.00007642246,0.00000452267,0.0001532696],"genre_scores_gemma":[0.9990885,0.0003307473,0.00003430207,0.0001722827,0.00001332169,0.00022798,0.00002943164,0.00001060834,0.0000927853],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1879239,"threshold_uncertainty_score":0.3532395,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1566673280","doi":"10.1002/cncy.21477","title":"Accuracy and risk of malignancy for diagnostic categories in urine cytology at a large tertiary institution","year":2014,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Cytology; Medicine; Malignancy; Urine cytology; Concordance; Biopsy; Atypia; Internal medicine; Cancer; Pathology; Bladder cancer","retraction":null,"screen_n_in":null,"score":{"opus":0.01227148496197383,"gpt":0.2922391815484984,"spread":0.2799676965865246,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000168359,0.0001435661,0.0004264402,0.0001072344,0.00006047688,0.000002332232,0.00004961369,0.0001259758,0.00005449864],"category_scores_gemma":[0.0005989796,0.0001206653,0.00004988362,0.00008511989,0.0001736597,0.00005376781,0.00005598359,0.00009585284,0.000003606011],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001056567,"about_ca_system_score_gemma":0.00011096,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003852427,"about_ca_topic_score_gemma":0.001383608,"domain_scores_codex":[0.9990173,0.00008625418,0.0002683761,0.000294746,0.00005677739,0.0002765668],"domain_scores_gemma":[0.9991966,0.0003432753,0.0001306553,0.0002027595,0.00006181351,0.00006487437],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004908544,0.0001243674,0.9850466,0.0002029079,0.00003483401,0.00004960736,0.0004757335,0.000006837331,0.001684996,0.001327958,0.00009933432,0.01045599],"study_design_scores_gemma":[0.00651153,0.0007163444,0.9757858,0.0001037656,0.0002890472,0.000199816,0.00003284184,0.00009255036,0.009013726,0.001565818,0.005565723,0.0001230611],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9903187,0.005844182,0.001958657,0.0004702496,0.0003013297,0.0006285359,0.0001683754,0.00002191687,0.0002880394],"genre_scores_gemma":[0.9946771,0.003894396,0.0002853717,0.0003340796,0.0001356262,0.0005061961,0.00003358166,0.00001659679,0.0001170736],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01033293,"threshold_uncertainty_score":0.4920588,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1544975802","doi":"10.1002/cncy.20205","title":"The use of FTA cards for preserving unfixed cytological material for high‐throughput molecular analysis","year":2012,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; Ontario Institute for Cancer Research; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Multiplex; DNA extraction; Elution; Polymerase chain reaction; Multiplex polymerase chain reaction; Medicine; Chromatography; Computational biology; Biology; Chemistry; Bioinformatics; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.0396157509029705,"gpt":0.3307272748414679,"spread":0.2911115239384974,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002902296,0.0001582772,0.0002939448,0.00003880277,0.0001518697,0.00001528574,0.0003010445,0.0002964818,0.00001656329],"category_scores_gemma":[0.0001458837,0.0001181656,0.0002329025,0.0001252697,0.0002244963,0.00000478614,0.0001649415,0.0000536501,3.60538e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001699522,"about_ca_system_score_gemma":0.00004047779,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004998222,"about_ca_topic_score_gemma":0.00003785281,"domain_scores_codex":[0.998804,0.0001036261,0.0002900889,0.0003396499,0.0000553394,0.0004072783],"domain_scores_gemma":[0.9989519,0.00006011424,0.0001713119,0.0005700991,0.0001866193,0.00005996353],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000252849,0.0000618602,0.003392873,0.00002033006,0.0002884422,6.159514e-7,0.00001149414,0.0001143534,0.9810824,0.009705042,0.003419222,0.00165047],"study_design_scores_gemma":[0.0004742785,0.0003274248,0.00357797,0.000003026151,0.0005197779,0.000009972017,0.000009869946,0.00009864529,0.7640358,0.0006671562,0.230072,0.0002041634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7771949,0.00100254,0.219521,0.0004365869,0.0002347446,0.0007879908,0.0007768553,0.0000195253,0.00002588392],"genre_scores_gemma":[0.9772941,0.0002624308,0.01872,0.0003684491,0.00028627,0.002038583,0.0008466492,0.00002422836,0.0001593225],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2266527,"threshold_uncertainty_score":0.4818655,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3014637850","doi":"10.1002/cncy.22271","title":"Cytologic grading of primary malignant salivary gland tumors: A blinded review by an international panel","year":2020,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"National Cancer Institute","keywords":"Medicine; Grading (engineering); Mucoepidermoid carcinoma; Acinic cell carcinoma; Fine-needle aspiration; Salivary gland; Cytopathology; Pathology; Salivary duct carcinoma; Carcinoma; Cytology; Radiology; Biopsy","retraction":null,"screen_n_in":null,"score":{"opus":0.1435533270774636,"gpt":0.3895423899548429,"spread":0.2459890628773793,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000292373,0.000628877,0.004350942,0.0001923201,0.00004444794,0.00001302301,0.0004319538,0.0003129545,0.0004384322],"category_scores_gemma":[0.00010247,0.0004388354,0.0006374596,0.0002829771,0.0001563861,0.00008537209,0.0001544253,0.0004740805,0.00004570256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004124516,"about_ca_system_score_gemma":0.000705665,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005144837,"about_ca_topic_score_gemma":0.000002802777,"domain_scores_codex":[0.9967697,0.0003705992,0.001215225,0.0009205451,0.0003324019,0.0003915128],"domain_scores_gemma":[0.9979686,0.0001637332,0.0008664026,0.0006156036,0.0001061079,0.0002795238],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001795042,0.001093139,0.01400171,0.08464986,0.0009160329,0.00919233,0.00008103083,1.231697e-7,0.00001769044,0.0002222103,0.008853317,0.880793],"study_design_scores_gemma":[0.001536314,0.0008275374,0.001900562,0.07040344,0.004278808,0.005412693,0.000007054127,0.000001542494,0.00003677248,0.0000406331,0.9150849,0.0004697572],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0005630296,0.9947531,0.000009701946,0.0007780335,0.0005302446,0.001504458,0.0008882397,0.00007923276,0.000893968],"genre_scores_gemma":[0.0008596528,0.9927477,0.0002259487,0.002005303,0.0004920583,0.0009080368,0.002591892,0.00008482337,0.00008460955],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9062316,"threshold_uncertainty_score":0.9998063,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1630105108","doi":"10.1002/cncy.21595","title":"Preanalytic parameters in epidermal growth factor receptor mutation testing for non–small cell lung carcinoma: A review of cytologic series","year":2015,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Epidermal growth factor receptor; Pathology; Lung cancer; Cytology; Lymph node; Biopsy; Cancer; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.09007052677116206,"gpt":0.38676263427054,"spread":0.2966921074993779,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003684549,0.0005020289,0.003102548,0.0003298786,0.00004429581,0.000008195151,0.000173123,0.0003345533,0.00003276262],"category_scores_gemma":[0.000773164,0.0003886923,0.0004329261,0.0005926839,0.0001268758,0.00008597982,0.0000518015,0.0003130033,0.000007337759],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001074813,"about_ca_system_score_gemma":0.002534022,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001955771,"about_ca_topic_score_gemma":0.00004292834,"domain_scores_codex":[0.9973139,0.0002411943,0.001173398,0.0006620361,0.0001565189,0.000452927],"domain_scores_gemma":[0.9974924,0.0004330926,0.0009839449,0.0003873553,0.0005522583,0.0001509954],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","study_design_scores_codex":[0.00009806717,0.000252151,0.009112464,0.6026607,0.000293035,0.000418828,0.0006552094,0.000007362308,0.00001783339,0.00002848333,0.001515089,0.3849408],"study_design_scores_gemma":[0.01339403,0.007546396,0.004945489,0.5367376,0.05795722,0.003758198,0.0005805324,0.0001815404,0.0004092152,0.000397615,0.3708623,0.003229798],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001936068,0.991488,0.0001110841,0.0001568741,0.0004027712,0.004804213,0.0006442859,0.00003515504,0.0004215919],"genre_scores_gemma":[0.0008867718,0.9877908,0.006191672,0.0002336026,0.0001397352,0.003584343,0.0007652099,0.00008053066,0.0003273207],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.381711,"threshold_uncertainty_score":0.9998565,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2146286597","doi":"10.1002/cncy.21436","title":"The value of second opinion in thyroid cytology: A review","year":2014,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Atypia; Thyroid; Thyroid nodules; Malignancy; Fine-needle aspiration; Radiology; Medical diagnosis; Pathology; Internal medicine; Biopsy","retraction":null,"screen_n_in":null,"score":{"opus":0.04267416765596135,"gpt":0.3957431584306475,"spread":0.3530689907746862,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007000885,0.0004533858,0.003765046,0.0001540398,0.00005437099,0.000005548032,0.0003170977,0.0003857028,0.0001743726],"category_scores_gemma":[0.0001469237,0.0002684367,0.0006335647,0.0003581012,0.0002767016,0.00002029016,0.0001122496,0.0005617905,0.0000491389],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004492417,"about_ca_system_score_gemma":0.0008749296,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003958361,"about_ca_topic_score_gemma":0.0001318636,"domain_scores_codex":[0.9970661,0.000561001,0.00116475,0.0005934688,0.0001698913,0.0004447647],"domain_scores_gemma":[0.997661,0.0004573118,0.0007641313,0.0009307335,0.00008605295,0.0001007944],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002772967,0.0001046044,0.0003319052,0.09174941,0.0001610246,0.00007363386,0.00002991761,2.136799e-7,0.000001468276,0.001401508,0.01469004,0.8914285],"study_design_scores_gemma":[0.0006857472,0.0003972647,0.0004491798,0.07634447,0.00102032,0.0005105656,0.000003594658,3.627861e-7,0.000003283105,0.00006336401,0.9203383,0.0001835753],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0000247841,0.9947628,0.000003229072,0.001000583,0.00128577,0.001847072,0.00009209846,0.00002104718,0.0009626402],"genre_scores_gemma":[0.00003281689,0.995837,0.00003891244,0.0007938506,0.0004009044,0.002391429,0.00008673269,0.00006039192,0.0003580096],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9056482,"threshold_uncertainty_score":0.9999768,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1540985757","doi":"10.1002/cncy.21449","title":"The value of the “suspicious for urothelial carcinoma” cytology category: A correlative study of 4 years including 337 patients","year":2014,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Medicine; Medical diagnosis; Cytology; Biopsy; Urine cytology; Urothelial carcinoma; Radiology; Carcinoma; Cancer; Bladder cancer; Internal medicine; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.02381806343040816,"gpt":0.3070032535674166,"spread":0.2831851901370084,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002409174,0.0001644209,0.0004905048,0.00005705042,0.0001640676,0.000003293808,0.0002083247,0.0001077869,0.0000106819],"category_scores_gemma":[0.0002060568,0.00009841232,0.0001301721,0.0001528211,0.0003258903,0.00002123943,0.0001193314,0.000170632,0.000001919934],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001231617,"about_ca_system_score_gemma":0.0002235483,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007200516,"about_ca_topic_score_gemma":0.0003412333,"domain_scores_codex":[0.9985902,0.0002641473,0.0003853169,0.0002849066,0.0001917855,0.0002836778],"domain_scores_gemma":[0.9986935,0.0002587467,0.0003134406,0.0004575758,0.0002274667,0.00004928111],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001178731,0.0004736213,0.9837829,0.00004549544,0.0001284112,0.000006122873,0.005843956,0.00004679964,0.001476231,0.001176535,0.000215754,0.0056254],"study_design_scores_gemma":[0.009067321,0.004397518,0.9798129,0.00003275761,0.000496731,0.00001981406,0.000759121,0.0001344515,0.003281803,0.0007851439,0.001102884,0.0001096215],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959245,0.0002744711,0.0001687172,0.0002441633,0.001117862,0.001685332,0.00006162372,0.00001324248,0.0005101361],"genre_scores_gemma":[0.9989386,0.00001967151,0.00004031392,0.0002651385,0.0001509498,0.0003766425,0.000004487232,0.00003029661,0.0001739574],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00788859,"threshold_uncertainty_score":0.4013138,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2526757007","doi":"10.1002/cncy.21780","title":"Young investigator challenge: Can the Ion AmpliSeq Cancer Hotspot Panel v2 be used for next‐generation sequencing of thyroid FNA samples?","year":2016,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Regione Campania","keywords":"Medicine; Thyroid cancer; Ion semiconductor sequencing; DNA sequencing; Oncology; Medical physics; Thyroid; Internal medicine; Genetics; Biology; DNA","retraction":null,"screen_n_in":null,"score":{"opus":0.223361957880993,"gpt":0.3383003882874765,"spread":0.1149384304064835,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002886425,0.000301054,0.0005910047,0.00009995684,0.000167645,0.00001782543,0.0001773676,0.0001828085,0.0001216374],"category_scores_gemma":[0.0001828303,0.0001776422,0.0001751084,0.000161463,0.0003214461,0.000107634,0.00005017718,0.0001319931,0.000002494925],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001056041,"about_ca_system_score_gemma":0.001136491,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00204325,"about_ca_topic_score_gemma":0.006467594,"domain_scores_codex":[0.9981145,0.0001142529,0.000458011,0.0005768992,0.0002515805,0.0004847636],"domain_scores_gemma":[0.9984187,0.0001917464,0.000322727,0.0005721685,0.0002722855,0.0002223528],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002110119,0.00009986791,0.04687823,0.0001346652,0.0001530871,0.00002952906,0.002683384,0.00004620116,0.92708,0.002178869,0.003984951,0.01652022],"study_design_scores_gemma":[0.01353298,0.002770566,0.09148773,0.001003397,0.001482139,0.0002044352,0.001146656,0.0002071267,0.8548836,0.001846984,0.03053591,0.0008985192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9429283,0.009996716,0.0005887665,0.04346147,0.001102848,0.001183108,0.0006190735,0.00006108022,0.00005861676],"genre_scores_gemma":[0.9850462,0.007457545,0.0003418774,0.002805794,0.001259381,0.00271071,0.00005781922,0.00006173579,0.0002589126],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07219642,"threshold_uncertainty_score":0.7244039,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1712129010","doi":"10.1002/cncy.21257","title":"Subclassification of lymphoproliferative disorders in serous effusions","year":2012,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Pleural and Pulmonary Diseases","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Medicine; Serous fluid; Immunophenotyping; Lymphoproliferative disorders; Lymphoma; Pathology; Subtyping; Effusion; Gastroenterology; Internal medicine; Immunology; Surgery; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.02461073432640058,"gpt":0.313252236394051,"spread":0.2886415020676504,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000653544,0.00007080713,0.0001849627,0.00007458327,0.00002042355,7.806362e-7,0.00003699848,0.00005587679,0.0001296089],"category_scores_gemma":[0.00004143341,0.00005759086,0.00003885153,0.0001532234,0.00008718773,0.00006009316,0.00001746799,0.00006043626,0.00001300536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005994563,"about_ca_system_score_gemma":0.00008049182,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008413575,"about_ca_topic_score_gemma":0.0001073286,"domain_scores_codex":[0.9994438,0.00005326483,0.0001513281,0.0001084195,0.0000611213,0.0001821057],"domain_scores_gemma":[0.9996862,0.00003133963,0.00005090404,0.0001184053,0.00002997403,0.00008312213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001766773,0.0002285136,0.9678513,0.00003929385,0.00000433168,0.000007093952,0.000545206,0.000005787689,0.02237384,0.0003758273,0.0001002954,0.008291792],"study_design_scores_gemma":[0.0005814721,0.00007727043,0.9955251,0.00002974122,0.00002970214,0.0000446529,0.0001428491,0.00004637595,0.001892906,0.0001624706,0.001409511,0.00005796782],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938923,0.002325573,0.00002997384,0.001284138,0.0001691479,0.0001900809,0.00002864933,0.00001606774,0.002064125],"genre_scores_gemma":[0.9986777,0.0004822297,0.00005949176,0.0002715187,0.000102367,0.00009394052,0.00002893735,0.000007191155,0.0002766134],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02767374,"threshold_uncertainty_score":0.2348487,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2048766144","doi":"10.1002/cncy.20152","title":"The evolving role of axillary lymph node fine‐needle aspiration in the management of carcinoma of the breast","year":2011,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Medicine; Fine-needle aspiration; Axillary lymph nodes; Radiology; Biopsy; Breast carcinoma; Lymph node; Carcinoma; Sentinel lymph node; Breast cancer; Surgery; Cancer; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01169364032871891,"gpt":0.2258608866861717,"spread":0.2141672463574528,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001785245,0.0001024393,0.0001462143,0.00001936396,0.00006246052,0.00000192047,0.0003315798,0.00005881455,0.000008390018],"category_scores_gemma":[0.000008318459,0.00005611617,0.00007548678,0.0001158899,0.0002599552,0.000003145844,0.0001726946,0.00004128982,3.728474e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002569465,"about_ca_system_score_gemma":0.00004996354,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003919023,"about_ca_topic_score_gemma":0.0002509806,"domain_scores_codex":[0.9992533,0.0001024205,0.0002319691,0.0001646098,0.00009871202,0.0001489911],"domain_scores_gemma":[0.9992476,0.00001470551,0.0001870393,0.0004588014,0.00008280043,0.000009030561],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001811731,0.0001146942,0.9391333,0.00007326786,0.0001066454,0.000004781697,0.001812179,0.0000431408,0.04441081,0.001092666,0.00005882684,0.01296846],"study_design_scores_gemma":[0.0004187927,0.00005534579,0.9436164,0.0000338986,0.00005880899,0.00003351342,0.00118804,0.000008343936,0.05419869,0.0002135423,0.0001217166,0.00005288353],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895204,0.007451511,0.00001950688,0.0002006445,0.000127006,0.0001838388,0.00003915612,0.000001699137,0.002456266],"genre_scores_gemma":[0.9993867,0.0002890704,0.00007966051,0.00006928765,0.00003870532,0.00009428943,0.000005059065,0.000008630072,0.00002855602],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01291558,"threshold_uncertainty_score":0.2288351,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1490428132","doi":"10.1002/cncy.21492","title":"Low interobserver agreement in cytology grading of mucinous pancreatic neoplasms","year":2014,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"National Cancer Institute","keywords":"Medicine; Grading (engineering); Kappa; Adenocarcinoma; Cyst; Cohen's kappa; Radiology; Carcinoembryonic antigen; Cytology; Nuclear medicine; Pathology; Cancer; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.03103124990881028,"gpt":0.3377530022242922,"spread":0.3067217523154819,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006429239,0.000172233,0.001027985,0.0002736547,0.00003310455,0.00000289126,0.0001606378,0.0002145796,0.0005244637],"category_scores_gemma":[0.0003101959,0.000148276,0.0000876788,0.0001949758,0.0003536561,0.00003616287,0.00008994472,0.0003209091,0.00004295757],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002223866,"about_ca_system_score_gemma":0.0002199054,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003416897,"about_ca_topic_score_gemma":0.0005124508,"domain_scores_codex":[0.9981452,0.0002990825,0.0005199012,0.0003706559,0.0001646359,0.0005005396],"domain_scores_gemma":[0.9989285,0.000291933,0.0001452464,0.0004090393,0.00009492915,0.000130337],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003993345,0.0002337887,0.9721912,0.0002893161,0.00005122564,0.0002442952,0.0007097488,0.00001715593,0.0172148,0.000979868,0.0002226114,0.007446681],"study_design_scores_gemma":[0.004673826,0.001948019,0.9784666,0.0004033903,0.0001981769,0.0004899281,0.000215593,0.001985286,0.009816278,0.0008171872,0.0008014082,0.0001843318],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923767,0.0004373645,0.001268764,0.0009421448,0.0002738798,0.000388347,0.000005275664,0.00002186373,0.004285674],"genre_scores_gemma":[0.9968977,0.0003226208,0.001053983,0.0006743954,0.000135839,0.0001539006,0.00000902329,0.00001906362,0.0007334551],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007398522,"threshold_uncertainty_score":0.604652,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2044224841","doi":"10.1002/cncy.20075","title":"Classifying B‐cell non‐Hodgkin lymphoma by using MIB‐1 proliferative index in fine‐needle aspirates","year":2010,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Medicine; Lymphoma; Proliferation index; Pathology; Immunophenotyping; Non-Hodgkin's lymphoma; Immunocytochemistry; Cytology; Immunohistochemistry; Aggressive lymphoma; Cytopathology; Flow cytometry; Rituximab; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.0191697854141618,"gpt":0.3051389603898265,"spread":0.2859691749756647,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001517851,0.000283069,0.000539588,0.0001745219,0.00009022147,0.00002537482,0.000107681,0.0002922287,0.0002039557],"category_scores_gemma":[0.00004874271,0.0002389081,0.0000875392,0.0002608795,0.0001614874,0.00009665845,0.00006499625,0.0002350459,0.000035074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003940379,"about_ca_system_score_gemma":0.0004744219,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005924664,"about_ca_topic_score_gemma":0.0006265857,"domain_scores_codex":[0.9984259,0.00006143442,0.0003569676,0.0005135731,0.0001545139,0.0004876272],"domain_scores_gemma":[0.9992116,0.00007117084,0.0001400995,0.0003241262,0.00009587761,0.0001571438],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001354978,0.0005857862,0.7815918,0.00004875516,0.00002157013,0.0005542438,0.0006049089,0.00002181186,0.2023752,0.00003086045,0.0007857448,0.01324378],"study_design_scores_gemma":[0.01261029,0.0006564537,0.6472445,0.000184054,0.0001622207,0.0005309512,0.0002674909,0.002560295,0.3293303,0.0001074114,0.005852673,0.0004934211],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948757,0.001214685,0.00006083092,0.0006790489,0.0005465203,0.0005570201,0.00003779245,0.0000408444,0.001987553],"genre_scores_gemma":[0.9971544,0.00007132244,0.0006249234,0.001116736,0.000255521,0.0003582902,0.00002918182,0.0000394196,0.0003501788],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1343474,"threshold_uncertainty_score":0.9742392,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1544082798","doi":"10.1002/cncy.21290","title":"Standardizing preanalytical variables for molecular cytopathology","year":2013,"lang":"en","type":"editorial","venue":"Cancer Cytopathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Cytopathology; Medicine; Medical physics; Selection (genetic algorithm); Pathology; Cytology; Computer science; Artificial intelligence","retraction":null,"screen_n_in":null,"score":{"opus":0.01153028103036833,"gpt":0.3709302139362861,"spread":0.3593999329059178,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003031719,0.0005613088,0.001461988,0.000260713,0.000155244,0.00005130763,0.0002331157,0.001441073,0.0004233574],"category_scores_gemma":[0.0008654401,0.0004873697,0.0003871048,0.0001742624,0.0002757918,0.00007712298,0.0001043583,0.0007361743,0.00005028396],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009847052,"about_ca_system_score_gemma":0.002664823,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001208898,"about_ca_topic_score_gemma":0.00002519328,"domain_scores_codex":[0.9969545,0.0001132333,0.0006104677,0.0010714,0.0004514152,0.0007990052],"domain_scores_gemma":[0.9971743,0.0005197488,0.0003002651,0.0007302038,0.000998545,0.0002769673],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003411394,0.0001412664,0.0002731197,0.0005921938,0.000568968,0.0006605486,0.0001734282,0.00002787788,0.0020963,0.001251104,0.9896145,0.004259513],"study_design_scores_gemma":[0.003882879,0.0009239321,0.0001199822,0.0003078852,0.003956255,0.000124878,0.00004226778,0.00005565921,0.0006963983,0.001383894,0.9880522,0.0004537779],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"editorial","genre_gemma":"editorial","genre_scores_codex":[0.001957322,0.01110579,0.02452141,0.001912848,0.9434146,0.003647773,0.004875598,0.0002961892,0.008268462],"genre_scores_gemma":[0.005641339,0.002019167,0.01364263,0.001359152,0.9494449,0.007763613,0.004735442,0.0004406111,0.01495313],"genre_candidate":"editorial","genre_consensus":"editorial","teacher_disagreement_score":0.01087878,"threshold_uncertainty_score":0.9998553,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1677856656","doi":"10.1002/cncy.21306","title":"Minimizing delays in DNA retrieval: The “freezer method” for glass coverslip removal. Letter to the editor regarding comparative study of epidermal growth factor receptor mutation analysis on cytology smears and surgical pathology specimens from primary and metastatic lung carcinomas","year":2013,"lang":"en","type":"letter","venue":"Cancer Cytopathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Biomedical engineering; Lift (data mining); Surgery; Computer science; Data mining","retraction":null,"screen_n_in":null,"score":{"opus":0.02535611852268249,"gpt":0.296448843162341,"spread":0.2710927246396586,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007588862,0.0004599357,0.001248805,0.0002868858,0.0001333006,0.0000489796,0.0003812477,0.0005672983,0.0000169513],"category_scores_gemma":[0.000316064,0.0003339087,0.0002002853,0.0002786319,0.0002499041,0.000009919427,0.0002372958,0.0007036998,0.000001251439],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000136219,"about_ca_system_score_gemma":0.0001213593,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004655798,"about_ca_topic_score_gemma":0.0006062868,"domain_scores_codex":[0.9958876,0.001583885,0.0006981253,0.001109565,0.0002310176,0.000489807],"domain_scores_gemma":[0.9963714,0.00222672,0.0005019503,0.000603657,0.0002296666,0.00006658682],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003259808,0.0002823933,0.01496061,0.0002617261,0.002757301,0.00171691,0.01195215,0.001072962,0.04711987,0.00007240638,0.9156418,0.0009020067],"study_design_scores_gemma":[0.02075884,0.01283247,0.1223286,0.000220848,0.01279708,0.001132477,0.00736108,0.002645459,0.02059325,0.0004888041,0.7949689,0.003872213],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9515325,0.001680322,0.002698554,0.03913189,0.001489053,0.001950906,0.001475859,0.000005975134,0.00003493412],"genre_scores_gemma":[0.8004665,0.0007790278,0.007362598,0.1705384,0.0170131,0.001245161,0.002314243,0.0001446231,0.0001363169],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.151066,"threshold_uncertainty_score":0.9999113,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3203744081","doi":"10.1002/cncy.22519","title":"The American Thyroid Association (ATA) integrates molecular testing into its framework for managing patients with anaplastic thyroid carcinoma (ATC): Update on the 2021 ATA ATC guidelines","year":2021,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Medicine; Anaplastic thyroid cancer; Thyroid cancer; Thyroid; Thyroid carcinoma; Cancer; Intensive care medicine; Pathology; Oncology; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.02308401698099044,"gpt":0.3073731023656447,"spread":0.2842890853846543,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003465354,0.0003577262,0.0005462266,0.0000661977,0.0004656537,0.00008616196,0.0002482135,0.00009761842,0.00002699759],"category_scores_gemma":[0.002672681,0.0002052044,0.000132049,0.0006047502,0.0001506605,0.00006367792,0.0001194493,0.0003861318,0.00001930835],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008368863,"about_ca_system_score_gemma":0.0003794306,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001605819,"about_ca_topic_score_gemma":0.0004201276,"domain_scores_codex":[0.9977003,0.0002081227,0.0004426632,0.0006783055,0.0003851441,0.0005854341],"domain_scores_gemma":[0.9959493,0.00145426,0.0005234767,0.0006713411,0.001283224,0.0001183522],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001499042,0.0003987044,0.8984148,0.0001038567,0.0007073524,0.0005030111,0.0006266703,0.0006249767,0.005406276,0.01007884,0.008567763,0.07306872],"study_design_scores_gemma":[0.009078985,0.00944736,0.87701,0.001897115,0.002514801,0.00009624611,0.003187516,0.002093693,0.06385994,0.01202241,0.01730835,0.001483532],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9544791,0.00914173,0.001527568,0.0331797,0.0005095229,0.0008494434,0.0001347934,0.00004674807,0.0001314085],"genre_scores_gemma":[0.9868725,0.001489368,0.003837297,0.00599219,0.0004353602,0.001038502,0.0001459873,0.00007262655,0.0001161946],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07158519,"threshold_uncertainty_score":0.8367991,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1520894258","doi":"10.1002/cncy.20166","title":"Maximizing the yield of lymph node cytology","year":2011,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Lung cancer; Radiology; Lymph node; Lymph; Mediastinal lymph node; Cancer; Endobronchial ultrasound; Fine-needle aspiration; Pathology; Biopsy; Internal medicine; Metastasis","retraction":null,"screen_n_in":null,"score":{"opus":0.06146146409889201,"gpt":0.3012307963816615,"spread":0.2397693322827695,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001129205,0.0001239802,0.0003531532,0.00005370437,0.00004836312,0.000001828466,0.0001215633,0.000103632,0.0007222511],"category_scores_gemma":[0.00004200777,0.00007719074,0.0001037586,0.0001067952,0.0002384756,0.00002259988,0.00005408353,0.000104758,0.00002739269],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001259217,"about_ca_system_score_gemma":0.0001479986,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005078481,"about_ca_topic_score_gemma":0.00006535315,"domain_scores_codex":[0.9991587,0.0000420254,0.0002272105,0.0002401504,0.00008502927,0.0002469206],"domain_scores_gemma":[0.999259,0.00007647913,0.0001121914,0.0004163104,0.00007687889,0.00005917446],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003067317,0.0002351475,0.9787588,0.00009647828,0.0001315017,0.0003247536,0.001735275,0.00000329715,0.003536565,0.003244587,0.001154292,0.01047263],"study_design_scores_gemma":[0.001705789,0.0003673081,0.9442929,0.0001687531,0.0004627448,0.0006083428,0.0002534782,0.00001209433,0.04824486,0.0006477751,0.003102029,0.0001339491],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9682965,0.004984866,0.0001933518,0.003457175,0.0007372586,0.0002975274,0.00002188856,0.00004361465,0.02196786],"genre_scores_gemma":[0.9956552,0.0009683486,0.0005929081,0.00219923,0.0001351704,0.0002042578,0.000002995539,0.00001772034,0.0002241865],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0447083,"threshold_uncertainty_score":0.7908143,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3042583328","doi":"10.1002/cncy.22326","title":"Testing for BAP1 loss and <i>CDKN2A/p16</i> homozygous deletion improves the accurate diagnosis of mesothelial proliferations in effusion cytology","year":2020,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Medicine; BAP1; Mesothelioma; Cytology; Pleural effusion; Malignancy; Peritoneal mesothelioma; Biopsy; Pathology; Fluorescence in situ hybridization; Retrospective cohort study; Gastroenterology; Radiology","retraction":null,"screen_n_in":null,"score":{"opus":0.03031091058277989,"gpt":0.2952482471512857,"spread":0.2649373365685058,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007327685,0.00009402037,0.0002120661,0.00003030704,0.00007041914,0.000004431578,0.00004893123,0.00006304327,0.00002044424],"category_scores_gemma":[0.0002705692,0.00006792037,0.00003674729,0.0001021064,0.000179294,0.00004244554,0.0000445715,0.00008195479,0.000001999978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003308073,"about_ca_system_score_gemma":0.00006702466,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004926079,"about_ca_topic_score_gemma":0.00004729962,"domain_scores_codex":[0.9993196,0.00004648745,0.0002143554,0.0002121422,0.00006589926,0.0001415591],"domain_scores_gemma":[0.9995216,0.000213913,0.00008514253,0.00008110412,0.00003873872,0.00005956577],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005938452,0.00009497689,0.9020224,0.0001563888,0.000009959199,0.00003062224,0.0003583495,0.00007918772,0.08773569,0.0002068812,0.0001473867,0.008564317],"study_design_scores_gemma":[0.001590449,0.000873372,0.9874765,0.00005375168,0.0001139491,0.00008863501,0.00008578571,0.0009561457,0.007562319,0.0004027126,0.0007019755,0.00009438766],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913152,0.0009132837,0.00019176,0.006683593,0.00007115446,0.0006168053,0.0001424425,0.00001562474,0.00005014488],"genre_scores_gemma":[0.9960181,0.0001987867,0.000606962,0.002307769,0.0001948207,0.0006138888,0.00003730416,0.00001163962,0.00001080309],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08545412,"threshold_uncertainty_score":0.2769712,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1717399098","doi":"10.1002/cncy.21262","title":"<scp><i>EZH2</i></scp> and <scp><i>CD79B</i></scp> mutational status over time in B‐cell non‐Hodgkin lymphomas detected by high‐throughput sequencing using minimal samples","year":2013,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Multiplex; Sanger sequencing; Medicine; Cancer research; B cell; Mutation; Pathology; Gene; Biology; Immunology; Antibody; Bioinformatics; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01552855328507093,"gpt":0.2576669536217897,"spread":0.2421384003367187,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002013247,0.0005492487,0.000901775,0.0002923401,0.000175523,0.0000793632,0.0001391425,0.0003827449,0.0002122293],"category_scores_gemma":[0.000303122,0.0005123375,0.000125331,0.0004065169,0.000353274,0.0003012639,0.0001481122,0.000239824,0.0001146734],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001512699,"about_ca_system_score_gemma":0.0008798317,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005630917,"about_ca_topic_score_gemma":0.0002025034,"domain_scores_codex":[0.9966363,0.000185159,0.000686187,0.0009800805,0.0003777965,0.00113453],"domain_scores_gemma":[0.9977665,0.0008993655,0.0003249368,0.0004001627,0.0002047282,0.0004042835],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003392941,0.0004364536,0.5318966,0.000163921,0.0001189039,0.0009981953,0.00243002,0.0001453018,0.4523692,0.00006889949,0.008493805,0.002844735],"study_design_scores_gemma":[0.01045799,0.0007035938,0.8644232,0.0002151363,0.0003342292,0.0008148856,0.0007135168,0.00174234,0.1163853,0.0004124328,0.003603695,0.0001937291],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9918277,0.005383169,0.0001150121,0.0001334924,0.0002996258,0.000915924,0.0002876113,0.00009670744,0.0009407453],"genre_scores_gemma":[0.9911852,0.0006245784,0.00511774,0.001402858,0.000257004,0.0004568487,0.0002200758,0.00009449376,0.0006411866],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3359839,"threshold_uncertainty_score":0.9997329,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3090351335","doi":"10.1002/cncy.22364","title":"COVID‐19's multipronged attack on mental health","year":2020,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"COVID-19 and Mental Health","field":"Psychology","cited_by":23,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Pandemic; Mental health; Quarter (Canadian coin); Stressor; Medicine; Distress; Coronavirus disease 2019 (COVID-19); Public health; Ethnic group; Gerontology; Psychiatry; Nursing; Political science; Clinical psychology; History; Disease","retraction":null,"screen_n_in":null,"score":{"opus":0.221306440402132,"gpt":0.4983419877366675,"spread":0.2770355473345355,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002753611,0.0002412544,0.0004289153,0.00007720978,0.0002565325,0.000008765496,0.0002612885,0.0001490167,0.005839493],"category_scores_gemma":[0.00008666953,0.0002366978,0.00009425511,0.0002092203,0.0001612683,0.00003809304,0.00008391281,0.0003816577,0.001589689],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001308554,"about_ca_system_score_gemma":0.001349206,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001000199,"about_ca_topic_score_gemma":0.0004867085,"domain_scores_codex":[0.9976057,0.0003821501,0.0003789499,0.0007728838,0.0001624867,0.0006978578],"domain_scores_gemma":[0.9981582,0.0000950847,0.0001730454,0.0003554477,0.00001891264,0.00119938],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.004240447,0.0008177903,0.09207357,0.0007512402,0.00008686624,0.0007363727,0.06632672,0.0001274966,0.002179357,0.007401315,0.7117085,0.1135503],"study_design_scores_gemma":[0.003559935,0.001844034,0.02370708,0.00002068439,0.00001001334,0.00006932065,0.001261176,0.00005716441,0.0001220737,0.00004482008,0.9690186,0.0002851067],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6267197,0.008278642,0.001010538,0.3384544,0.007119617,0.0024241,0.0009451878,0.0006816255,0.01436627],"genre_scores_gemma":[0.7283891,0.0003392038,0.0001137759,0.2686637,0.0006184558,0.0002392574,0.00007550573,0.00004266411,0.001518252],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2573101,"threshold_uncertainty_score":0.9991877,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1874085523","doi":"10.1002/cncy.21271","title":"A validation study of the FocalPoint GS imaging system for gynecologic cytology screening","year":2013,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"London Health Sciences Centre; Mount Sinai Hospital","funders":"","keywords":"Medicine; Squamous intraepithelial lesion; Cytology; Radiology; Oncology; Cancer; Pathology; Internal medicine; Cervical intraepithelial neoplasia; Cervical cancer","retraction":null,"screen_n_in":null,"score":{"opus":0.04179331451163949,"gpt":0.3473488531207247,"spread":0.3055555386090852,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036261,0.0001251985,0.0004325261,0.00009681194,0.0001265482,0.0000116352,0.0001964714,0.00008353501,0.0006133778],"category_scores_gemma":[0.0002282975,0.00008202117,0.0001119048,0.000216549,0.0001501631,0.00005176504,0.0001452382,0.0002166002,0.00001088527],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001950335,"about_ca_system_score_gemma":0.000134545,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005677064,"about_ca_topic_score_gemma":0.0001136325,"domain_scores_codex":[0.9985854,0.0001858681,0.0003556107,0.0003283937,0.0001892273,0.000355495],"domain_scores_gemma":[0.9987335,0.0002034496,0.0001379097,0.0003816286,0.0004637807,0.00007976523],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004962414,0.0003435026,0.8576105,0.0005978592,0.0000756794,0.00003281468,0.001186826,0.0001029581,0.01870643,0.0005201903,0.0009599235,0.119367],"study_design_scores_gemma":[0.003964881,0.0009643522,0.9820367,0.00003662835,0.0001599395,0.0001262423,0.003231373,0.001291481,0.007481868,0.0001907584,0.0004030234,0.0001128028],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897975,0.0004349967,0.002956832,0.002081133,0.0004469132,0.002501006,0.00001094832,0.00004981333,0.001720803],"genre_scores_gemma":[0.9974725,0.000009035379,0.0002550922,0.0004020645,0.0001933922,0.001496461,0.00000485177,0.00001973525,0.0001469305],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1244261,"threshold_uncertainty_score":0.6716056,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1595203599","doi":"10.1002/cncy.21395","title":"Growing indication for FNA to study and analyze tumor heterogeneity at metastatic sites","year":2014,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Fine-needle aspiration; Primary tumor; Biopsy; Cancer; Disease; Metastatic tumor; Metastasis; Tumor heterogeneity; Pathology; Cytopathology; Cytology; Radiology; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.03040068205154901,"gpt":0.3839935271833473,"spread":0.3535928451317983,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001677696,0.0001078579,0.0002683871,0.00009891303,0.0001306577,0.000009067386,0.00003829352,0.0000199929,0.00003118176],"category_scores_gemma":[0.00008587632,0.00008887473,0.00003944804,0.0001089128,0.00003370559,0.00004866634,0.0000371956,0.00003768104,0.00000863151],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001491575,"about_ca_system_score_gemma":0.00004235525,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003379654,"about_ca_topic_score_gemma":0.0002171914,"domain_scores_codex":[0.9992222,0.0000576457,0.000163818,0.0003103448,0.00007278902,0.0001732346],"domain_scores_gemma":[0.9994993,0.00006903754,0.00006497587,0.0001851253,0.00006490134,0.0001166475],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000227384,0.000274261,0.9436702,0.00009620089,0.0002580235,0.00003882355,0.00252173,0.0000340049,0.02571084,0.000180463,0.0002134766,0.02677459],"study_design_scores_gemma":[0.004490166,0.002097529,0.9749249,0.000029566,0.001641446,0.0001335591,0.000453995,0.0002695037,0.01244,0.0002688829,0.003062431,0.0001879706],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950747,0.0004930756,0.002177416,0.001028916,0.0001029649,0.0009872461,0.00003654458,0.00003023186,0.00006888561],"genre_scores_gemma":[0.9949496,0.00001107689,0.002103497,0.001829856,0.00009156567,0.0008383701,0.00003868029,0.00001706257,0.0001202722],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03125474,"threshold_uncertainty_score":0.3624206,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1514020970","doi":"10.1002/cncy.20042","title":"Improvement in the routine screening performance of cytotechnologists over time","year":2009,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Sensitivity (control systems); Gynecology","retraction":null,"screen_n_in":null,"score":{"opus":0.02438006670262439,"gpt":0.3371773498832298,"spread":0.3127972831806055,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004290462,0.0001061918,0.0002936917,0.0001267017,0.00003450602,0.0000049702,0.0002106013,0.0001144728,0.0008450513],"category_scores_gemma":[0.00005603655,0.00007065116,0.00005678722,0.0003585739,0.0001530208,0.00003819075,0.00004919336,0.0003809364,0.00001159357],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009359797,"about_ca_system_score_gemma":0.00008274209,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005681028,"about_ca_topic_score_gemma":0.00001847763,"domain_scores_codex":[0.9989145,0.00003612642,0.0002550013,0.0002229373,0.000244029,0.0003274503],"domain_scores_gemma":[0.9994442,0.00003297273,0.00006061454,0.0003439446,0.00007775274,0.00004053195],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.001476143,0.0002730627,0.1923372,0.0001399986,0.00001534842,0.0001740931,0.000617762,0.00006701635,0.08025265,0.0004896441,0.0005280522,0.7236291],"study_design_scores_gemma":[0.001756118,0.001799448,0.9792327,0.00003667614,0.00002088672,0.00004595263,0.00004558906,0.0009670785,0.01488132,0.0001143728,0.001014408,0.00008545579],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901922,0.0009615683,0.00006979572,0.003538522,0.00003447835,0.0003380816,0.000007144059,0.00002815116,0.004830108],"genre_scores_gemma":[0.9971027,0.0002826864,0.0001366017,0.00206194,0.0001137938,0.0000452877,0.000006755205,0.000007169487,0.0002430647],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7868955,"threshold_uncertainty_score":0.9252719,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3003765010","doi":"10.1002/cncy.22240","title":"Cytologic features and diagnostic value of PeriView FLEX transbronchial needle aspiration targeting pulmonary nodules","year":2020,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Cancer Agency; University of British Columbia","funders":"","keywords":"Medicine; Malignancy; Bronchoscopy; Radiology; FLEX; Lung cancer; Nodule (geology); Cytology; Sampling (signal processing); Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.01902855880225447,"gpt":0.2830164356235358,"spread":0.2639878768212814,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007844809,0.0001810296,0.000498001,0.00004014094,0.00006273797,0.000007785547,0.00006149607,0.0001195323,0.0001163533],"category_scores_gemma":[0.0001787616,0.000144556,0.00009116187,0.0001246546,0.0001552434,0.00005473775,0.00003362292,0.0001546782,0.000004920776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007802966,"about_ca_system_score_gemma":0.00007876574,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008408857,"about_ca_topic_score_gemma":0.0000153498,"domain_scores_codex":[0.9989226,0.00008012064,0.0002714233,0.000385273,0.0001210417,0.000219542],"domain_scores_gemma":[0.9994454,0.0001247016,0.0001061599,0.0001317136,0.00005750358,0.0001345174],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006991483,0.0005490147,0.849201,0.00206605,0.0001734668,0.001116902,0.004121368,0.0003615746,0.05467993,0.002692785,0.00220689,0.08213187],"study_design_scores_gemma":[0.002302748,0.002505848,0.97173,0.0003483391,0.0007037281,0.0003915898,0.0002990456,0.000350169,0.01821246,0.0001838354,0.002691583,0.0002806423],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9528373,0.0389308,0.000133921,0.006784084,0.0002141338,0.000473528,0.0000481477,0.00005145004,0.0005266446],"genre_scores_gemma":[0.9923543,0.004140449,0.0007361278,0.002102165,0.000408676,0.000173472,0.00004468255,0.00002149988,0.00001860805],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.122529,"threshold_uncertainty_score":0.5894822,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2998280663","doi":"10.1002/cncy.22233","title":"Breast implant–associated anaplastic large cell lymphoma and effusions: A review with emphasis on the role of cytopathology","year":2020,"lang":"en","type":"review","venue":"Cancer Cytopathology","topic":"Breast Implant and Reconstruction","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Anaplastic large-cell lymphoma; Cytopathology; Breast implant; Pathology; Breast cancer; Effusion; Fine-needle aspiration; Implant; Lymphoma; Biopsy; Cancer; Cytology; Surgery; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01536196251076324,"gpt":0.2804372654013117,"spread":0.2650753028905485,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003376427,0.0005672349,0.003066579,0.0001964617,0.0001340498,0.00000847414,0.0002031849,0.0005018166,0.0001280822],"category_scores_gemma":[0.00005593917,0.0003144078,0.0003142294,0.0005145373,0.0003269477,0.00002791458,0.0001169706,0.0005143487,0.00003369819],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001609505,"about_ca_system_score_gemma":0.0007278625,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001934128,"about_ca_topic_score_gemma":0.00004669734,"domain_scores_codex":[0.9973906,0.0005386006,0.0007270703,0.0006547307,0.0002068076,0.0004821615],"domain_scores_gemma":[0.9980557,0.0003775686,0.000821857,0.000429502,0.0001298593,0.0001855349],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002042008,0.0001807437,0.0003114135,0.01271258,0.0001538887,0.0007234446,0.00006411758,1.871495e-8,0.000008757233,0.0001143184,0.0003647342,0.9851618],"study_design_scores_gemma":[0.002260447,0.0009518879,0.000565837,0.05324819,0.00582585,0.4247183,0.00007371305,0.000004241152,0.00001399915,0.00002157742,0.5118965,0.0004195112],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.003389729,0.9922647,0.000005910696,0.0003562667,0.0003135524,0.001347476,0.001730036,0.00005699629,0.0005353045],"genre_scores_gemma":[0.003097316,0.9955252,0.00003173452,0.0004120287,0.0002188971,0.0003205933,0.0002505924,0.00007287371,0.00007080854],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9847423,"threshold_uncertainty_score":0.9999308,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1581883738","doi":"10.1002/cncy.20041","title":"Predictors of malignancy in thyroid fine‐needle aspirates “cyst fluid only” cases","year":2009,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Medicine; Malignancy; Cyst; Pathology; Cytology; Fine-needle aspiration; Thyroid; Thyroidectomy; Cytopathology; Thyroid cancer; Radiology; Cancer; Biopsy; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01848377184810461,"gpt":0.2909108219879633,"spread":0.2724270501398587,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001072752,0.0002336985,0.0006344378,0.0001992117,0.00003155676,0.000005617258,0.0001080623,0.0001435649,0.0002547011],"category_scores_gemma":[0.00006669638,0.0001971768,0.0001223346,0.000307094,0.0001145314,0.00006437377,0.00002720646,0.0001482701,0.00001621038],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002351974,"about_ca_system_score_gemma":0.0003042492,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002694914,"about_ca_topic_score_gemma":0.0003918063,"domain_scores_codex":[0.9985415,0.00005488443,0.0004522531,0.0004036486,0.0001623444,0.0003853441],"domain_scores_gemma":[0.9992069,0.00006580407,0.0001380731,0.0003784088,0.00009144442,0.0001193651],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000424342,0.0008722962,0.9260955,0.00008930598,0.00005310656,0.002872245,0.0005783278,0.00007540459,0.04903963,0.0007885051,0.004184369,0.01492695],"study_design_scores_gemma":[0.003962737,0.003999509,0.9331045,0.0003978805,0.0001855572,0.000865044,0.000114173,0.00001015355,0.05357357,0.0001926853,0.003364852,0.000229365],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9700869,0.02513853,0.000006857185,0.001602149,0.0003524562,0.0004177849,0.0001192776,0.00005194614,0.002224076],"genre_scores_gemma":[0.9962828,0.001923836,0.0001255132,0.0008544951,0.0002522484,0.0001338948,0.00004010689,0.00002189783,0.000365222],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02619586,"threshold_uncertainty_score":0.8040636,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4312212178","doi":"10.1002/cncy.22678","title":"The 2021 ASCO guideline on the management of salivary gland malignancy endorses FNA biopsy and the risk stratification scheme proposed by the Milan System for Reporting Salivary Gland Cytopathology","year":2022,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Medicine; Guideline; Cytopathology; Salivary gland; Fine-needle aspiration; Biopsy; Salivary gland cancer; Malignancy; Pathology; Cytology","retraction":null,"screen_n_in":null,"score":{"opus":0.02402364552996572,"gpt":0.2968131550073332,"spread":0.2727895094773675,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003386169,0.0002995893,0.0005872021,0.00005158562,0.001220367,0.00003929114,0.0003404056,0.00007290991,0.00005622111],"category_scores_gemma":[0.0002122196,0.0001260851,0.000189525,0.0002311441,0.0005027698,0.00002750128,0.0001952658,0.0003269106,0.000002160638],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001383843,"about_ca_system_score_gemma":0.0001153933,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002693808,"about_ca_topic_score_gemma":0.00003002562,"domain_scores_codex":[0.9965295,0.0008585133,0.001288796,0.0005736329,0.0003477323,0.0004018926],"domain_scores_gemma":[0.9963233,0.0009385512,0.001543323,0.0009933732,0.0001438616,0.00005760295],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.009611675,0.001227402,0.8301305,0.001070155,0.002304727,0.002274764,0.003786847,0.0002070902,0.007468041,0.0949459,0.02336802,0.02360491],"study_design_scores_gemma":[0.05608457,0.008085422,0.7280074,0.001994835,0.0103959,0.02056998,0.05121373,0.004616431,0.04338115,0.009946575,0.06369063,0.00201343],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9625508,0.01499632,0.0002304695,0.01612261,0.0007186822,0.003674017,0.0005220462,0.00004353574,0.001141504],"genre_scores_gemma":[0.9930504,0.002090087,0.0003524509,0.0005888124,0.0002471712,0.003099119,0.0001910007,0.00003864325,0.0003423372],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1021231,"threshold_uncertainty_score":0.9386199,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3005822738","doi":"10.1002/cncy.22248","title":"Interlaboratory concordance of p16/Ki‐67 dual‐staining interpretation in HPV‐positive women in a screening population","year":2020,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Ministry of Health, British Columbia","keywords":"Medicine; Concordance; Cervical intraepithelial neoplasia; Confidence interval; Internal medicine; Gynecology; Positive predicative value; Population; Reproducibility; Cervical cancer; Biomarker; Cancer; Oncology; Predictive value","retraction":null,"screen_n_in":null,"score":{"opus":0.03007945335872515,"gpt":0.3511764113904003,"spread":0.3210969580316752,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003756401,0.0001211292,0.000478843,0.0002226752,0.00001700922,0.000006864839,0.00007794144,0.0001011457,0.0005090634],"category_scores_gemma":[0.0003770845,0.0001255828,0.00003901519,0.000633167,0.0001074813,0.0001169328,0.00007747372,0.0004176701,0.000003916723],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005256616,"about_ca_system_score_gemma":0.0002141178,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003543309,"about_ca_topic_score_gemma":0.0004157972,"domain_scores_codex":[0.9985154,0.0001760978,0.0004299887,0.0003377487,0.0001767718,0.0003639419],"domain_scores_gemma":[0.9993567,0.0000873748,0.0001163264,0.0001220151,0.0001746413,0.0001429615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004165625,0.00004726513,0.8253466,0.0003092999,0.00001655824,0.0003227037,0.03009718,0.0003835925,0.006493214,0.0001660057,0.00002153122,0.1326304],"study_design_scores_gemma":[0.002519778,0.0006941259,0.9866498,0.0001574553,0.00001061993,0.00001024889,0.003155346,0.004760209,0.001727981,0.0001155833,0.0000837227,0.0001151081],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945087,0.0008261102,0.001320154,0.001069316,0.00008308683,0.000345267,0.00002633522,0.00002219794,0.001798862],"genre_scores_gemma":[0.9977981,0.00005873175,0.0002253163,0.001585336,0.0001239772,0.0001423766,0.00002566473,0.00001927328,0.00002121568],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1613031,"threshold_uncertainty_score":0.5573887,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3090098409","doi":"10.1002/cncy.22360","title":"Cytology‐based screening for anal intraepithelial neoplasia in women with a history of cervical intraepithelial neoplasia or cancer","year":2020,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Medicine; Cervical intraepithelial neoplasia; Anal cancer; Intraepithelial neoplasia; Cytology; Gynecology; Cancer; Cervical cancer; Oncology; Pathology; Internal medicine; Prostate cancer","retraction":null,"screen_n_in":null,"score":{"opus":0.07036675989512038,"gpt":0.3390856139125337,"spread":0.2687188540174133,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003229637,0.0003489891,0.001194901,0.0002802664,0.00004835517,0.000008588235,0.0003072076,0.0003379679,0.005264755],"category_scores_gemma":[0.0002506404,0.0002715563,0.0001255001,0.0005394391,0.00063311,0.00008017998,0.00008744273,0.0007485159,0.00000655097],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0013495,"about_ca_system_score_gemma":0.003800317,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000622295,"about_ca_topic_score_gemma":0.002337746,"domain_scores_codex":[0.9970748,0.0001573196,0.0006315828,0.0007775887,0.0003970553,0.0009616169],"domain_scores_gemma":[0.9983551,0.0002598564,0.0001892576,0.0003118051,0.0003469643,0.0005369966],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.3043925,0.0006853658,0.2900062,0.003885968,0.0003587763,0.002069578,0.0104491,0.001186442,0.02848406,0.0003822116,0.007205221,0.3508946],"study_design_scores_gemma":[0.05663833,0.01967487,0.7771958,0.0004535807,0.0005999366,0.00040742,0.001501396,0.01699726,0.009056474,0.0001431729,0.1159644,0.001367371],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9713881,0.002432441,0.006659322,0.01501836,0.0005786165,0.001792927,0.0004642528,0.0001261159,0.001539878],"genre_scores_gemma":[0.9861433,0.0002424246,0.002145109,0.008579591,0.00113051,0.001414461,0.00002828861,0.00007446324,0.0002418595],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4871896,"threshold_uncertainty_score":0.9999737,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1592826781","doi":"10.1002/cncy.21535","title":"Multiplex sequencing for <i>EZH2</i>, <i>CD79B</i>, and <i>MYD88</i> mutations using archival cytospin preparations from B‐cell non‐Hodgkin lymphoma aspirates previously tested for <i>MYC</i> rearrangement and <i>IGH/BCL2</i> translocation","year":2015,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Chromosomal translocation; Sanger sequencing; Fluorescence in situ hybridization; Lymphoma; Gene rearrangement; Molecular biology; Multiplex; Multiplex ligation-dependent probe amplification; Multiplex polymerase chain reaction; Cancer research; Mutation; Biology; Medicine; Gene; Polymerase chain reaction; Genetics; Pathology; Chromosome; Exon","retraction":null,"screen_n_in":null,"score":{"opus":0.08855667975440545,"gpt":0.3405722976572889,"spread":0.2520156179028834,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003189211,0.0004002826,0.0006902175,0.0001355573,0.0002975311,0.00007356826,0.0000957858,0.0001660192,0.000004287172],"category_scores_gemma":[0.0001227159,0.0003743314,0.0001349364,0.0001781471,0.0002240155,0.0002079265,0.00004501194,0.00007533695,0.000002340744],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004997777,"about_ca_system_score_gemma":0.000816404,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008874299,"about_ca_topic_score_gemma":0.0005295586,"domain_scores_codex":[0.9977244,0.00009824507,0.0006185137,0.000835838,0.0001939278,0.0005290483],"domain_scores_gemma":[0.9982654,0.0003924955,0.000263843,0.0003772793,0.0003398287,0.0003611097],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002190312,0.001298239,0.08259673,0.0007577238,0.0004156086,0.0001352596,0.01371334,0.001973408,0.8355848,0.0003223484,0.00271434,0.05829796],"study_design_scores_gemma":[0.1107545,0.009265152,0.05800769,0.001735757,0.006944218,0.001533057,0.004203802,0.06304637,0.7060257,0.004513709,0.03129223,0.002677893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9710041,0.006354509,0.01618983,0.000912687,0.0002943359,0.00394799,0.0009465126,0.0001026564,0.0002473902],"genre_scores_gemma":[0.9604168,0.000719588,0.0330424,0.001567159,0.0003451653,0.003124076,0.0006319863,0.00007416208,0.00007867191],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1295591,"threshold_uncertainty_score":0.9998708,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4361191041","doi":"10.1002/cncy.22692","title":"Thyroid FNA cytology: The Eastern versus Western perspectives","year":2023,"lang":"en","type":"letter","venue":"Cancer Cytopathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Cytology; Fine needle aspiration cytology; Thyroid; Thyroid nodules; General surgery; Clinical Practice; Radiology; Pathology; Family medicine; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.05977607123253642,"gpt":0.3439797303654812,"spread":0.2842036591329448,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001591664,0.0006695077,0.001179682,0.0002322733,0.000190718,0.00004615917,0.0004705982,0.001027508,0.0002700506],"category_scores_gemma":[0.0000772691,0.0004517826,0.0004549716,0.0002950425,0.0006506976,0.00004750346,0.0002320052,0.002204825,0.0011486],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008454386,"about_ca_system_score_gemma":0.000504015,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003673522,"about_ca_topic_score_gemma":0.0004224762,"domain_scores_codex":[0.996785,0.0002441057,0.0004385482,0.00118228,0.0004170196,0.0009330263],"domain_scores_gemma":[0.9976873,0.0004447759,0.0003043459,0.001257446,0.0001922558,0.0001138169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005551943,0.00009303103,0.033419,0.0001666686,0.0007323499,0.0101106,0.001935535,0.000004135124,0.00006767918,0.00005101564,0.9496381,0.003226738],"study_design_scores_gemma":[0.005198329,0.001686083,0.06377948,0.000282366,0.001746784,0.0005724644,0.0008593776,0.000006896589,0.00008654167,0.0001018406,0.9250853,0.0005945194],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.04629656,0.02956695,0.00001208074,0.9140278,0.005671344,0.001044747,0.0003140878,0.0003626489,0.002703744],"genre_scores_gemma":[0.1052687,0.01944671,0.00005713647,0.8053388,0.03080557,0.004695607,0.0006498904,0.0005607231,0.03317689],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.1086891,"threshold_uncertainty_score":0.9997934,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}