{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":12,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":12,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"836bb00c6d40","filters":{"venue":"Cellular Logistics"}},"results":[{"id":"W2041227960","doi":"10.4161/21592799.2014.986399","title":"Interaction with the effector dynamin-related protein 1 (Drp1) is an ancient function of Rab32 subfamily proteins","year":2014,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Calnexin; Cell biology; GTPase; Biology; Rab; Endoplasmic reticulum; DNM1L; Dynamin; Mitochondrion; Golgi apparatus; Mitochondrial fission; Calreticulin; Genetics; Cell; Endocytosis","authors":[{"name":"Carolina G. Ortiz-Sandoval","is_ca":true},{"name":"Sarah C. Hughes","is_ca":true},{"name":"Joel B. Dacks","is_ca":true},{"name":"Thomas Simmen","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01240518084214768,"gpt":0.2191098229233436,"spread":0.206704642081196,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003297563,0.0001658148,0.0001567565,0.00003981518,0.0001011429,0.00001824691,0.0001477831,0.0002009881,0.00006928328],"category_scores_gemma":[0.0001336289,0.0001122632,0.00006525184,0.0001134107,0.0001789453,0.000004857886,0.00004166235,0.0001663913,0.00003190598],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001550676,"about_ca_system_score_gemma":0.00004144333,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002625318,"about_ca_topic_score_gemma":0.00003996721,"domain_scores_codex":[0.998853,0.0002632732,0.0002169447,0.0003345463,0.0001455453,0.0001866609],"domain_scores_gemma":[0.9990491,0.00002026501,0.0001902508,0.0005072966,0.0001666462,0.00006644814],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003798898,0.00009559623,0.0001836942,0.00003424491,0.00003443952,0.000001857626,0.00006177738,0.0004840596,0.9959338,0.0007027393,0.0007889673,0.001298879],"study_design_scores_gemma":[0.001196613,0.005269574,0.001049652,0.00003471623,0.0001123098,0.00001795774,0.0001599953,0.00594982,0.9152535,0.0001695252,0.07046631,0.0003200469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6251708,0.00007291565,0.372593,0.00007732258,0.0004368996,0.0005452652,0.00001394533,0.00001774749,0.001072165],"genre_scores_gemma":[0.9970086,0.000004635773,0.000701342,0.0002602526,0.000221558,0.00006105301,0.0002961091,0.00002419154,0.001422264],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3718916,"threshold_uncertainty_score":0.457796,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2052903022","doi":"10.4161/cl.1.1.14426","title":"Circadian genes and insulin exocytosis","year":2011,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":28,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canadian Sleep & Circadian Network","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Chicago Biomedical Consortium; National Institute on Aging; National Institutes of Health; University of Chicago; Amylin Pharmaceuticals","keywords":"Circadian rhythm; Exocytosis; Circadian clock; Biology; CLOCK; Insulin; Endocrinology; Internal medicine; Neuroscience; Secretion; Medicine","authors":[{"name":"Biliana Marcheva","is_ca":false},{"name":"Kathryn Moynihan Ramsey","is_ca":false},{"name":"Joseph Bass","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08615945785182774,"gpt":0.2391330534316679,"spread":0.1529735955798401,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008871719,0.0001326176,0.0001377719,0.00007368967,0.0001256973,0.00003115991,0.0001491041,0.0001033451,0.0001585057],"category_scores_gemma":[0.0002709966,0.000131247,0.00003706396,0.0001385564,0.0002881026,0.0000585104,0.00006730701,0.0001295372,0.0002812941],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001775622,"about_ca_system_score_gemma":0.00003374713,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002632923,"about_ca_topic_score_gemma":0.000003422216,"domain_scores_codex":[0.9990517,0.00004991446,0.0001620725,0.0003362788,0.0001124558,0.0002875796],"domain_scores_gemma":[0.9993762,0.00007586549,0.00005343692,0.0002795828,0.00001829924,0.0001966265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003415283,0.000178294,0.008534933,0.00007669641,0.00001075445,0.001111323,0.002559267,0.00001066967,0.6140301,0.3377279,0.0004092438,0.03531672],"study_design_scores_gemma":[0.0002654343,0.00005429603,0.003291448,0.000008476802,0.00002197691,0.00006727082,0.00005685678,0.0003868932,0.970945,0.002420404,0.02224522,0.000236723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9312664,0.005188351,0.01689557,0.0000763873,0.0007989624,0.0002601382,0.00003962345,0.0001743842,0.04530013],"genre_scores_gemma":[0.9972988,0.0007237506,0.0008373949,0.0003414185,0.0001122793,0.000006655343,0.00000232037,0.00002188254,0.0006554941],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.356915,"threshold_uncertainty_score":0.5352096,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1977611628","doi":"10.4161/cl.20490","title":"Vesicle trafficking from a lipid perspective","year":2012,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Burnaby Hospital; Simon Fraser University","funders":"","keywords":"Exocytosis; Vesicle; Cell biology; Vesicular transport protein; Biology; Golgi apparatus; Endocytosis; Lipid metabolism; Biochemistry; Endoplasmic reticulum; Membrane; Receptor","authors":[{"name":"Jesper Johansen","is_ca":true},{"name":"Vidhya Ramanathan","is_ca":true},{"name":"Christopher Beh","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01915228039936649,"gpt":0.2562948998095031,"spread":0.2371426194101366,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008683315,0.0001574188,0.0001314591,0.00002063781,0.00008386122,0.00002096233,0.0001579156,0.000162355,0.000084044],"category_scores_gemma":[0.000099698,0.0001446473,0.00008989644,0.00005588642,0.0001015682,0.000004353852,0.00007602473,0.0001117832,0.00005161836],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002466495,"about_ca_system_score_gemma":0.0000357596,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004532006,"about_ca_topic_score_gemma":0.000006243924,"domain_scores_codex":[0.9991291,0.00004000205,0.0001374489,0.0002492103,0.0001119382,0.0003323285],"domain_scores_gemma":[0.9993955,0.0000137048,0.00005541401,0.0003350175,0.00006880776,0.000131479],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000229447,0.00007914881,0.00221784,0.000004272383,0.00003007715,0.000004087728,0.0002582223,0.00002280056,0.9950011,0.0007522943,0.0007588525,0.0008483054],"study_design_scores_gemma":[0.0003218365,0.00007255784,0.001669774,0.000004512232,0.00008484057,0.000006675197,0.0004889586,0.00002237321,0.959354,0.0000766806,0.03765366,0.0002441384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9797453,0.001103589,0.0141947,0.00005657204,0.001073447,0.0001238329,0.00005036915,0.00003248183,0.003619664],"genre_scores_gemma":[0.9946649,0.00003084004,0.001381394,0.0001738994,0.003126229,0.000006131627,0.0001848341,0.00002757234,0.0004041994],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03689481,"threshold_uncertainty_score":0.5898546,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2320375604","doi":"10.4161/cl.28114","title":"From all to (nearly) none","year":2014,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Context (archaeology); Saccharomyces cerevisiae; Phylogenetic tree; Phylogenetics; Yeast; Fungal protein; Microsporidia; Genetics; Encephalitozoon cuniculi; Genome; Lineage (genetic); Evolutionary biology; Spore; Gene; Botany","authors":[{"name":"Lael D. Barlow","is_ca":true},{"name":"Joel B. Dacks","is_ca":true},{"name":"Jeremy G. Wideman","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02205232337300069,"gpt":0.2722751649667347,"spread":0.250222841593734,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001696313,0.0001381223,0.0001242917,0.00003225586,0.00004939387,0.00004059142,0.0003208352,0.0001443964,0.00008519428],"category_scores_gemma":[0.0002853629,0.0001313624,0.00005822457,0.00006971033,0.00007133825,8.100411e-7,0.0002562568,0.0001033071,0.0005537379],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009485591,"about_ca_system_score_gemma":0.00003210401,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007907651,"about_ca_topic_score_gemma":0.00001947546,"domain_scores_codex":[0.9989021,0.00006311273,0.0001486731,0.0003705479,0.0001941768,0.0003213612],"domain_scores_gemma":[0.9990965,0.00002362598,0.00002709472,0.0005270172,0.00009713336,0.0002286602],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003772047,0.00004301755,0.0004358133,0.000006744862,0.00002581079,0.000006152338,0.00003045452,0.0004704928,0.9871639,0.0001677893,0.00952195,0.002090148],"study_design_scores_gemma":[0.000233325,0.0003153872,0.0003441758,0.00000476386,0.00001323761,0.000001203765,0.00001516829,0.0008267993,0.6131963,0.0005419932,0.3843093,0.0001984343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6680611,0.0004455829,0.3218077,0.0004184054,0.0004200515,0.0001829017,0.00007785032,0.0000221701,0.008564225],"genre_scores_gemma":[0.9883703,0.00003421111,0.006072534,0.0006461831,0.001083409,0.00001041281,0.000341083,0.0000287876,0.003413059],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3747873,"threshold_uncertainty_score":0.7117366,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2024778298","doi":"10.4161/cl.1.2.15512","title":"The Garz Sec7 domain guanine nucleotide exchange factor for Arf regulates salivary gland development in Drosophila","year":2011,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"National Institute of Neurological Disorders and Stroke; Natural Sciences and Engineering Research Council of Canada; Cancer Research Society; National Institutes of Health; National Science Foundation","keywords":"Guanine nucleotide exchange factor; Nucleotide; Drosophila (subgenus); Domain (mathematical analysis); Saliva; Guanine; Salivary gland; Chemistry; Biology; Genetics; Biochemistry; Gene; GTPase; Mathematics","authors":[{"name":"Tomasz Szul","is_ca":false},{"name":"Jason Burgess","is_ca":true},{"name":"Mili Jeon","is_ca":false},{"name":"Guillermo Marqués","is_ca":false},{"name":"Julie A. Brill","is_ca":true},{"name":"Elizabeth Sztul","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03100932488906346,"gpt":0.2220011318859989,"spread":0.1909918069969355,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003127474,0.0002183011,0.0001748772,0.00003804306,0.0001740564,0.00002459322,0.000255217,0.000203826,0.00004514345],"category_scores_gemma":[0.00005020144,0.0001749444,0.00009295202,0.00006710176,0.0001457015,0.000003383281,0.00006283385,0.0001003255,0.000007947271],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002718596,"about_ca_system_score_gemma":0.00006372623,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001597613,"about_ca_topic_score_gemma":0.0002585417,"domain_scores_codex":[0.9987566,0.00004234476,0.0003522131,0.0003471505,0.0001266208,0.0003750039],"domain_scores_gemma":[0.9993505,0.00002700035,0.0001005408,0.0003644559,0.0000734523,0.00008400651],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004252996,0.0001594801,0.007633809,0.0001207284,0.00008093074,0.0000534161,0.001116936,0.00001941647,0.9865516,0.001798251,0.0002440606,0.001796018],"study_design_scores_gemma":[0.001608141,0.0003298298,0.02180423,0.00003984472,0.00003990086,0.000009184753,0.000192029,0.000224011,0.5649583,0.003445579,0.4067209,0.0006280786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8878191,0.002429134,0.1074738,0.00006334693,0.0003709937,0.0005702751,0.00005387977,0.00002401213,0.001195489],"genre_scores_gemma":[0.9914071,0.0002962973,0.004830509,0.00006594728,0.0002274773,0.00004645316,0.002027919,0.00004281682,0.001055465],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4215933,"threshold_uncertainty_score":0.7134025,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2155286662","doi":"10.4161/cl.24551","title":"Translational control and autism-like behaviors","year":2013,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Autism; Neuroscience; Translation (biology); EIF4E; Excitatory postsynaptic potential; Synapse; Neurotransmission; Inhibitory postsynaptic potential; Biology; Psychology; Messenger RNA; Genetics; Developmental psychology; Gene","authors":[{"name":"Christos G. Gkogkas","is_ca":true},{"name":"Nahum Sonenberg","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008445686194883588,"gpt":0.2048978846432879,"spread":0.1964521984484043,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003978451,0.0001155348,0.00008126112,0.00001966854,0.00006619625,0.00002753057,0.00008165368,0.00009367363,0.00006164979],"category_scores_gemma":[0.00001263469,0.0001153925,0.00003342839,0.00002820707,0.000112826,0.000001703119,0.00003179106,0.00005317723,0.00002948511],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002493483,"about_ca_system_score_gemma":0.00002665444,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001478359,"about_ca_topic_score_gemma":0.000006088835,"domain_scores_codex":[0.9993672,0.00002047937,0.0001328054,0.0002245207,0.00008621738,0.0001688064],"domain_scores_gemma":[0.9997153,0.000007000755,0.00002973604,0.0001346924,0.00003146961,0.0000818401],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000007977737,0.00004557008,0.007041174,0.000008910696,0.00001844839,0.000003227242,0.00002083124,0.0001003119,0.9887822,0.0003317651,0.001750264,0.001889381],"study_design_scores_gemma":[0.004381879,0.0007207584,0.7965136,0.00001572269,0.0001642957,0.00004856848,0.0001599807,0.004027852,0.1004774,0.004525766,0.08755997,0.0014042],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9576126,0.0009718991,0.03964643,0.0003140494,0.0001907078,0.0002646007,0.00002996465,0.00001184649,0.0009578419],"genre_scores_gemma":[0.9972939,0.0001167486,0.001379405,0.0003892638,0.00001558463,0.00001940311,0.0001383864,0.00001645394,0.0006308519],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8883048,"threshold_uncertainty_score":0.4705571,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2071407318","doi":"10.4161/cl.19414","title":"The SMS domain of Trs23p is responsible for the in vitro appearance of the TRAPP I complex in<i>Saccharomyces cerevisiae</i>","year":2012,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Concordia University","funders":"National Institute of General Medical Sciences","keywords":"Saccharomyces cerevisiae; Chemistry; Golgi apparatus; Cell biology; Protein subunit; Endosome; Cytosol; Endoplasmic reticulum; ATPase; Biochemistry; In vitro; Yeast; Biophysics; Biology; Enzyme; Gene; Cell","authors":[{"name":"Stephanie Brunet","is_ca":true},{"name":"Baraa Noueihed","is_ca":true},{"name":"Nassim Shahrzad","is_ca":true},{"name":"Djenann Saint‐Dic","is_ca":true},{"name":"Benedeta Hasaj","is_ca":true},{"name":"Tian Lai Guan","is_ca":true},{"name":"Adrian Moores","is_ca":true},{"name":"Charles Barlowe","is_ca":false},{"name":"Michael Sacher","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02620216931757089,"gpt":0.2512490489976561,"spread":0.2250468796800852,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008467975,0.0001297058,0.0001881421,0.00002279487,0.00009742803,0.000008668729,0.0004059089,0.0001217741,0.000005628828],"category_scores_gemma":[0.00007918364,0.00007394907,0.0001619473,0.0001616376,0.0003471074,0.000003217739,0.00004728587,0.0001133825,7.550614e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001036741,"about_ca_system_score_gemma":0.00005921326,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000342792,"about_ca_topic_score_gemma":0.00006262755,"domain_scores_codex":[0.9989263,0.0001092521,0.000381041,0.0001584913,0.0001448813,0.0002800786],"domain_scores_gemma":[0.9991409,0.0001033399,0.0001667422,0.0005056145,0.00005522337,0.00002818494],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003633927,0.00006900217,0.003950175,0.00006547481,0.00002068817,3.859175e-7,0.0002683818,0.00008179752,0.9932119,0.001414439,0.00008755351,0.0004668317],"study_design_scores_gemma":[0.0006998308,0.00006379154,0.006569992,0.00003064665,0.00003509356,0.000001910975,0.0003891359,0.000469822,0.9104593,0.0008270469,0.08032678,0.0001266782],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9018053,0.01938059,0.07612514,0.0008457902,0.000341865,0.0009826284,0.000125797,0.000004492836,0.0003884375],"genre_scores_gemma":[0.9985503,0.0005326699,0.0004176419,0.00008779758,0.00009482205,0.00002505034,0.0001204402,0.00001539047,0.000155916],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09674501,"threshold_uncertainty_score":0.3015556,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2102390287","doi":"10.4161/cl.21497","title":"Novel roles of PAK1 in the heart","year":2012,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre","funders":"British Heart Foundation; Wellcome Trust","keywords":"Mathematics","authors":[{"name":"Yunbo Ke","is_ca":false},{"name":"Ming Lei","is_ca":true},{"name":"Xin Wang","is_ca":false},{"name":"R. John Solaro","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02487352059961475,"gpt":0.2573249095561105,"spread":0.2324513889564958,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003271843,0.00008671201,0.00009472428,0.0000167876,0.00002242813,0.000006416974,0.0002085458,0.00007852018,0.000007495797],"category_scores_gemma":[0.0002577749,0.00006504912,0.00004291542,0.00006571387,0.0001160013,0.000001993237,0.00008058648,0.00006596864,0.000008079314],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004637137,"about_ca_system_score_gemma":0.00002267257,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002640678,"about_ca_topic_score_gemma":0.00001184849,"domain_scores_codex":[0.9993922,0.00004040382,0.0001528961,0.0001097848,0.00009972351,0.0002050417],"domain_scores_gemma":[0.9995012,0.00002430881,0.00005156218,0.0003614463,0.00002947749,0.00003199652],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001993918,0.0002136141,0.008514779,0.00002353012,0.000009465877,0.000001449651,0.00006229131,0.00009166093,0.9779463,0.01055506,0.002244932,0.0003169063],"study_design_scores_gemma":[0.0001980478,0.00006952761,0.003344733,0.000006741261,0.0000116209,0.000008942705,0.00007860911,0.00002611397,0.9563918,0.0001284414,0.03964273,0.00009276857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6180788,0.1087091,0.2678252,0.0006865659,0.0006559492,0.0009218503,0.0003644511,0.00002450343,0.0027336],"genre_scores_gemma":[0.9965462,0.00004802933,0.002790574,0.0002393045,0.0001828096,0.00001118204,0.0001296206,0.000009935218,0.00004236187],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3784674,"threshold_uncertainty_score":0.2652626,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2777010794","doi":"10.1080/21592799.2017.1403530","title":"Vps34 and the Armus/TBC-2 Rab GAPs: Putting the brakes on the endosomal Rab5 and Rab7 GTPases","year":2017,"lang":"en","type":"review","venue":"Cellular Logistics","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"Academy of Finland","keywords":"Rab; Endosome; GTPase; Cell biology; Small GTPase; Lysosome; Guanine nucleotide exchange factor; Biology; Phosphatidylinositol; Kinase; Signal transduction; Biochemistry","authors":[{"name":"Fiona Law","is_ca":true},{"name":"Christian E. Rocheleau","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07891157049574342,"gpt":0.300823404796571,"spread":0.2219118343008276,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001077884,0.0005301223,0.0007849501,0.0000344208,0.0009049964,0.0002682484,0.0007219141,0.0004365929,0.00001773829],"category_scores_gemma":[0.0006285925,0.0002431549,0.0004026303,0.00005406326,0.001458643,0.000003549702,0.0002228727,0.0005605219,0.000011378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001202897,"about_ca_system_score_gemma":0.0001188388,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002389055,"about_ca_topic_score_gemma":0.00003315779,"domain_scores_codex":[0.9979007,0.0004243715,0.0004842846,0.0005905043,0.0002315853,0.0003686165],"domain_scores_gemma":[0.9976759,0.0004733968,0.00048248,0.001224509,0.00006248504,0.00008121453],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000334299,0.0002210134,0.0001212513,0.009495195,0.001771663,0.0002930235,0.0007020448,0.00002322717,0.007954537,0.03169838,0.002197219,0.9451882],"study_design_scores_gemma":[0.0004772975,0.00008048894,0.000009159409,0.0007210029,0.0008230571,0.00006195004,0.000054516,0.00004273915,0.0003671837,0.0003768612,0.9967057,0.0002800137],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0005031452,0.993364,0.003030344,0.0003781231,0.0003582628,0.0009721132,0.00008645354,0.0000144881,0.001293007],"genre_scores_gemma":[0.01302129,0.9828787,0.00004438691,0.0001968279,0.0009197047,0.00008047148,0.001674645,0.00006357695,0.001120328],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9945085,"threshold_uncertainty_score":0.9915569,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2328155346","doi":"10.4161/cl.28461","title":"Altered trafficking of mutated growth factor receptors and their associated molecules","year":2014,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Aging","funders":"","keywords":"Endosome; Cell biology; Endocytosis; Golgi apparatus; Endoplasmic reticulum; Receptor tyrosine kinase; Endocytic cycle; Signal transduction; Internalization; Vesicular transport protein; Biology; Receptor; Chemistry; Vesicle; Intracellular; Biochemistry; Membrane","authors":[{"name":"Shunsuke Kon","is_ca":true},{"name":"Nobuhide Kobayashi","is_ca":true},{"name":"Masanobu Satake","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01303179342017508,"gpt":0.2041437528974775,"spread":0.1911119594773024,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001648882,0.0001794507,0.0002165372,0.00004139034,0.00005622209,0.00001428476,0.0001193781,0.0002090837,0.00001627011],"category_scores_gemma":[0.0002004815,0.0001610092,0.00008668373,0.00007535613,0.0001570303,0.000002311368,0.00003199795,0.00009058661,0.000001520784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008443477,"about_ca_system_score_gemma":0.00002154726,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000183006,"about_ca_topic_score_gemma":0.00001864346,"domain_scores_codex":[0.9990951,0.00008375032,0.000256347,0.0002708996,0.00009233209,0.0002015958],"domain_scores_gemma":[0.9994477,0.00002573194,0.0001358475,0.0001940322,0.0001205586,0.00007612119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003048529,0.00005435362,0.003062968,0.00003665202,0.00005738727,0.000001434366,0.0001503553,0.00009031177,0.9953908,0.000219269,0.00003048298,0.0008755465],"study_design_scores_gemma":[0.0007053916,0.0003456818,0.002575665,0.00002786027,0.00004552271,0.000002746693,0.0001009273,0.004400701,0.9868309,0.0003415716,0.00431052,0.0003124365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7275477,0.0003320839,0.2715756,0.00001586969,0.0001565934,0.00008568845,0.00003278421,0.0000177304,0.0002360007],"genre_scores_gemma":[0.9964971,0.000145178,0.0003172053,0.0000332276,0.00009297,0.000002364776,0.002794328,0.00002731641,0.0000903441],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2712584,"threshold_uncertainty_score":0.6565766,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2000756529","doi":"10.4161/cl.1.3.16192","title":"Putative terminator and/or effector functions of Arf GAPs in the trafficking of clathrin-coated vesicles","year":2011,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Aging","funders":"","keywords":"Effector; Vesicle; Terminator (solar); Cell biology; Clathrin; Biology; Membrane; Biochemistry; Physics","authors":[{"name":"Shunsuke Kon","is_ca":true},{"name":"Tomo Funaki","is_ca":true},{"name":"Masanobu Satake","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02694937526538625,"gpt":0.2366657398815182,"spread":0.209716364616132,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002912895,0.0001113494,0.0001727661,0.00004534032,0.00003105977,0.000004174724,0.0001228848,0.0001196562,0.00002102227],"category_scores_gemma":[0.00007714797,0.00007819806,0.00006660317,0.0001032532,0.0002259361,0.000002512692,0.00002054245,0.0000844619,0.000001603603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004116586,"about_ca_system_score_gemma":0.00003176468,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003204587,"about_ca_topic_score_gemma":0.0000416754,"domain_scores_codex":[0.9992271,0.00009136526,0.0002880689,0.0001764741,0.00009344581,0.0001235658],"domain_scores_gemma":[0.9995298,0.00004063584,0.0001280979,0.0002148641,0.00005990904,0.00002672241],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001869018,0.0001491721,0.007253142,0.00009085106,0.00002772648,0.0000245727,0.001172576,0.0000325839,0.990187,0.0002303478,0.00001283788,0.0006322205],"study_design_scores_gemma":[0.0007196417,0.0007894695,0.0253438,0.00003935654,0.00009816895,0.00001226958,0.001230903,0.0004455205,0.969749,0.0001389569,0.001251189,0.0001817059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9710717,0.0005327992,0.02770928,0.000005789755,0.00006664619,0.0001805728,0.0000462994,0.000003958988,0.0003829711],"genre_scores_gemma":[0.9988583,0.0000801033,0.0003238352,0.00001324706,0.00003059389,0.000007435433,0.0006196207,0.00001100152,0.00005583383],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02778665,"threshold_uncertainty_score":0.3188824,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2059844589","doi":"10.4161/cl.1.1.14274","title":"This article contains supplemental information... or not","year":2011,"lang":"en","type":"article","venue":"Cellular Logistics","topic":"Diverse Scientific and Economic Studies","field":"Economics, Econometrics and Finance","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Concordia University; McGill University","funders":"","keywords":"Computer science","authors":[{"name":"Michael Sacher","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1139354591449048,"gpt":0.2101170902658041,"spread":0.09618163112089927,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000321995,0.0001093936,0.0002183636,0.00009395707,0.0001609476,0.00007008292,0.0002066662,0.00005273778,0.07080847],"category_scores_gemma":[0.0001294518,0.0001087356,0.00006637654,0.00009582907,0.0001539366,0.0003212299,0.0001186133,0.00006942418,0.0535853],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007268703,"about_ca_system_score_gemma":0.00001535227,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002507995,"about_ca_topic_score_gemma":0.00001198034,"domain_scores_codex":[0.9990234,0.000004840756,0.0004781769,0.0001905237,0.00002814548,0.0002749352],"domain_scores_gemma":[0.9994282,0.00002333195,0.0001900579,0.0002533598,0.00002964922,0.00007541687],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007824109,0.0001152112,0.01000866,0.00002340493,0.00009244953,0.00001731032,0.004252732,0.00001254937,0.00002120276,0.6607586,0.3242791,0.0003405768],"study_design_scores_gemma":[0.0009649065,0.00009507711,0.001490209,0.000004001858,0.00001700313,0.000003080824,0.001835631,0.002533428,0.002008541,0.004929816,0.9857575,0.0003608171],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"other","genre_gemma":"empirical","genre_scores_codex":[0.01114354,0.0001572965,0.02139705,0.0001116753,0.002741573,0.0002471433,0.00182057,0.00007894865,0.9623022],"genre_scores_gemma":[0.9104221,0.00005083967,0.00234751,0.0005512815,0.00005958364,0.00001203914,0.00005549649,0.000008908074,0.0864922],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8992786,"threshold_uncertainty_score":0.9471516,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}