{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":89,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":89,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"07a54f95cbe0","filters":{"venue":"Current Opinion in Gastroenterology"}},"results":[{"id":"W2171733881","doi":"10.1097/mog.0b013e3282f3f4c4","title":"Dietary fructose and the metabolic syndrome","year":2008,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Diet, Metabolism, and Disease","field":"Medicine","cited_by":209,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Heart and Stroke Foundation of Canada","keywords":"Metabolic syndrome; Fructose; Medicine; Internal medicine; Endocrinology; Chemistry; Food science; Obesity","authors":[{"name":"Abigale Miller","is_ca":true},{"name":"Khosrow Adeli","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07697090115150174,"gpt":0.3721530006302264,"spread":0.2951820994787246,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002731026,0.0005898918,0.003271901,0.0004672649,0.00007313365,0.00001829359,0.0002924919,0.0002122075,0.00005975261],"category_scores_gemma":[0.0001448937,0.0003612405,0.0007303273,0.000233467,0.000709709,0.00007053567,0.0002521927,0.0009225223,0.00006651686],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000319804,"about_ca_system_score_gemma":0.0001678071,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001004469,"about_ca_topic_score_gemma":0.00000184333,"domain_scores_codex":[0.9967679,0.0007179199,0.00096688,0.0006647469,0.0002685607,0.0006140072],"domain_scores_gemma":[0.9984921,0.0001467136,0.0003530737,0.0006537407,0.00004479925,0.0003095534],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008077745,0.0006299517,0.004197742,0.01589519,0.0004215008,0.00008908813,0.0001535569,2.943036e-7,1.797692e-8,0.0004451877,0.00682916,0.9705305],"study_design_scores_gemma":[0.004685972,0.0001797956,0.009663713,0.005348017,0.000848453,0.003222839,0.00001484075,0.000006326831,3.958371e-9,0.00005959372,0.9758135,0.0001569415],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000735538,0.9909554,0.000007196327,0.0002182546,0.006514987,0.00137912,0.00009057268,0.00004306844,0.00005582711],"genre_scores_gemma":[0.0001389447,0.9979286,0.00003336491,0.0001897252,0.000800106,0.0003769076,0.0004427645,0.00005489858,0.00003473147],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9703736,"threshold_uncertainty_score":0.9998839,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2083197722","doi":"10.1097/mog.0b013e3282f21388","title":"Pathogenesis of enteric Salmonella infections","year":2008,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":172,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Salmonella; Immunology; Biology; Enterocolitis; Flagellin; Microbiology; Pathogenesis; Immune system; Context (archaeology); Salmonella infection; Medicine; Receptor; Bacteria; Pathology","authors":[{"name":"Guntram A. Graßl","is_ca":true},{"name":"B. Brett Finlay","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.109267907611618,"gpt":0.3459260637709601,"spread":0.2366581561593422,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001959855,0.0004434583,0.001898815,0.0001312189,0.0000586348,0.000006407992,0.0004684287,0.0003580729,0.000150706],"category_scores_gemma":[0.00007056828,0.0001710668,0.0007062577,0.0004653031,0.000179835,0.00004188878,0.000212934,0.0004224937,0.00005209338],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006745757,"about_ca_system_score_gemma":0.0000253224,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004104374,"about_ca_topic_score_gemma":0.00003693917,"domain_scores_codex":[0.996497,0.000978027,0.001222058,0.0006156524,0.0001253338,0.0005619255],"domain_scores_gemma":[0.9985778,0.0004165918,0.0006909515,0.0001536175,0.00004909624,0.0001119326],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000230623,0.0004550833,0.0541778,0.001503437,0.00004187869,0.000001997642,0.00001415504,0.000001185668,0.00001663526,0.00001543383,0.001628435,0.9421209],"study_design_scores_gemma":[0.000142753,0.0005854308,0.02734192,0.002161701,0.00003981211,0.0002793359,0.000006924352,0.000002197621,1.267022e-7,0.0000231748,0.9692397,0.0001768859],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.007668359,0.9873672,0.00001057343,0.00003907073,0.004201126,0.0004535322,0.0001973554,0.00003916118,0.00002364061],"genre_scores_gemma":[0.0004852219,0.9979544,0.00001298876,0.00001501875,0.000631294,0.000163759,0.0007256464,0.000003925014,0.000007688184],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9676113,"threshold_uncertainty_score":0.69759,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2166104982","doi":"10.1097/mog.0b013e3282f1dcc4","title":"The evidence for Mycobacterium paratuberculosis in Crohnʼs disease","year":2008,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":160,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Montreal General Hospital; McGill University Health Centre","funders":"","keywords":"Paratuberculosis; Mycobacterium avium subspecies paratuberculosis; Crohn's disease; Disease; Immunology; Antimycobacterial; Immune system; Mycobacterium; Biology; Medicine; Genetics; Bacteria; Mycobacterium tuberculosis; Tuberculosis; Pathology","authors":[{"name":"Marcel A. Behr","is_ca":true},{"name":"Vivek Kapur","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2295920347834042,"gpt":0.472252426615244,"spread":0.2426603918318398,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004872082,0.0005352778,0.001699681,0.0005191326,0.0001064952,0.00005172343,0.0005016685,0.0002223409,0.00004047388],"category_scores_gemma":[0.00168103,0.0003645277,0.0007353536,0.0003551865,0.0002126581,0.0001199137,0.0002379389,0.0009533467,0.0000577335],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000398875,"about_ca_system_score_gemma":0.0006206814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001472913,"about_ca_topic_score_gemma":0.00002676205,"domain_scores_codex":[0.9958172,0.0006577844,0.001186173,0.0008288316,0.0003333798,0.001176632],"domain_scores_gemma":[0.9967245,0.001579807,0.0003099826,0.0007871712,0.0001186774,0.0004798414],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00496747,0.001149845,0.3990422,0.06918649,0.0001716022,0.00006268109,0.00005832227,0.000001209222,2.528012e-7,0.00007753421,0.09060143,0.434681],"study_design_scores_gemma":[0.001247627,0.0006110001,0.04423542,0.038714,0.0001083908,0.00009221924,0.000003702036,0.00002575853,2.705676e-8,0.00001640356,0.9147859,0.0001595961],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004932341,0.9905655,0.00003125452,0.001061421,0.004306906,0.003279361,0.0002314111,0.00002538375,0.000005497963],"genre_scores_gemma":[0.0001428507,0.9929833,0.0000305514,0.00006686629,0.001001425,0.004938803,0.0007599456,0.00005472244,0.00002152688],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8241844,"threshold_uncertainty_score":0.9998807,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2000545144","doi":"10.1097/mog.0b013e3282f0d012","title":"The functional interactions of commensal bacteria with intestinal secretory IgA","year":2007,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":155,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"Immune system; Biology; Commensalism; Immunology; Microbiology; Cytokine; Secretion; Dendritic cell; Intestinal mucosa; Cell biology; Bacteria; Medicine","authors":[{"name":"Andrew J. Macpherson","is_ca":true},{"name":"Emma Slack","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07989763370935458,"gpt":0.3362851505784868,"spread":0.2563875168691322,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004900299,0.0005613418,0.001413355,0.0004826613,0.0002074882,0.00001480361,0.0006040933,0.0003947807,0.0004456702],"category_scores_gemma":[0.000058923,0.0003669749,0.0003455603,0.00023011,0.001215526,0.00006909741,0.0003074872,0.002036998,0.0001977289],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001609127,"about_ca_system_score_gemma":0.0002161415,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002052061,"about_ca_topic_score_gemma":0.0000680028,"domain_scores_codex":[0.9963152,0.0009721636,0.001297845,0.0005580683,0.0000638174,0.0007928885],"domain_scores_gemma":[0.9974513,0.0008907723,0.0009362784,0.0005418813,0.0001423394,0.00003740694],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003681898,0.00174597,0.008936209,0.00664605,0.001655287,0.000008462903,0.0001864998,0.000002970432,0.00176524,0.001304026,0.03271733,0.94135],"study_design_scores_gemma":[0.001279808,0.0008901108,0.0005167878,0.004401871,0.0001477152,0.0009811263,0.00006501308,6.627876e-7,0.00001635891,0.00001455997,0.991493,0.0001930069],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001038638,0.9752263,0.0005529425,0.00008873944,0.02227152,0.0005799204,0.00009526544,0.00004578837,0.0001008917],"genre_scores_gemma":[0.001198643,0.9961558,0.00004672225,0.00002446266,0.000297097,0.0002003264,0.001778291,0.00005041493,0.0002482367],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9587756,"threshold_uncertainty_score":0.9998782,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2034750447","doi":"10.1097/mog.0b013e3282f37b59","title":"Recent developments in intestinal magnesium absorption","year":2008,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Magnesium in Health and Disease","field":"Nursing","cited_by":154,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Hypomagnesemia; TRPM7; Transient receptor potential channel; Chemistry; Magnesium; Intracellular; Ion channel; Cell biology; Homeostasis; Biochemistry; Biology; Receptor","authors":[{"name":"Gary A. Quamme","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07009731095311438,"gpt":0.3394668669397295,"spread":0.2693695559866151,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002383469,0.0001989776,0.000241764,0.0004438022,0.00006665829,0.000007676393,0.00018414,0.00007555841,0.0001800855],"category_scores_gemma":[0.0001626997,0.0002169388,0.00003685022,0.0002613702,0.0001018352,0.0001242869,0.00007061648,0.0003529777,0.00009483776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000252222,"about_ca_system_score_gemma":0.00007134066,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004119557,"about_ca_topic_score_gemma":0.00005847599,"domain_scores_codex":[0.9977889,0.0002647802,0.0006421559,0.0004191089,0.0001922747,0.0006928009],"domain_scores_gemma":[0.9993623,0.00004227986,0.0001327883,0.0001927114,0.00006486909,0.0002050038],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00187229,0.0004969573,0.9774739,0.0003571095,4.60444e-7,0.000007942192,0.0002591856,0.00003671292,0.0000311402,0.00001973547,0.00156514,0.01787947],"study_design_scores_gemma":[0.002601094,0.0004450339,0.9842531,0.00007551623,0.000002491986,0.00009872502,0.0000299923,0.000356193,0.00001281801,0.0001000307,0.01190909,0.0001159057],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.982002,0.001112297,0.0001139143,0.001846439,0.01424306,0.0004326368,0.000006775775,0.00005827517,0.0001846288],"genre_scores_gemma":[0.9982697,0.0003229279,0.0004169704,0.0004139192,0.0003031248,0.0001317205,0.0001164796,0.00001675476,0.000008401365],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01776357,"threshold_uncertainty_score":0.8846508,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2066494092","doi":"10.1097/00001574-200403000-00017","title":"Probiotics and prebiotics in gastrointestinal disorders","year":2004,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":150,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Gastroenterology; Internal medicine","authors":[{"name":"Richard N. Fedorak","is_ca":true},{"name":"Karen Madsen","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02299839262987536,"gpt":0.2576692816845878,"spread":0.2346708890547125,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001529981,0.0001394867,0.0001567917,0.00004079408,0.00004130774,0.00001962188,0.0001414303,0.00004762281,0.00001130599],"category_scores_gemma":[0.00002935645,0.00007007884,0.00003125618,0.0001487027,0.0001128346,0.00005817696,0.0001101212,0.0003032317,0.000003771012],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000470749,"about_ca_system_score_gemma":0.00000677287,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002741241,"about_ca_topic_score_gemma":0.0006857971,"domain_scores_codex":[0.9989095,0.00006538061,0.0002651188,0.0002879077,0.00007114887,0.0004009803],"domain_scores_gemma":[0.9997849,0.00002824327,0.00006149737,0.00003922921,0.00001371704,0.00007242957],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00016699,0.0006515143,0.980224,0.00004618441,0.000002569603,0.000001770332,0.00008301955,0.0002628527,0.001754485,0.001007462,0.00002552814,0.01577366],"study_design_scores_gemma":[0.001074371,0.001521769,0.9938627,0.0003808411,0.000001696529,0.00006909465,0.000096457,0.0001824063,0.00001746211,0.00217917,0.0005092383,0.0001048157],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970307,0.0002026513,0.0001205979,0.001830896,0.0004862877,0.0002558074,0.00001743271,0.00002122965,0.00003442152],"genre_scores_gemma":[0.999053,0.0003655043,0.0003979377,0.00003834631,0.00008493865,0.000007647413,0.00005043642,0.000001093878,0.000001090486],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01566884,"threshold_uncertainty_score":0.2857732,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2044337217","doi":"10.1097/mog.0b013e3282f4cdd8","title":"Pharmaconutrition: a new emerging paradigm","year":2008,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Clinical Nutrition and Gastroenterology","field":"Nursing","cited_by":137,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Kingston General Hospital; Queen's University; Clinical Evaluation Research Unit","funders":"","keywords":"Intensive care medicine; Parenteral nutrition; Medicine; Enteral administration; Glutamine; Randomized controlled trial; Critically ill; Surgery; Biology","authors":[{"name":"Naomi E. Jones","is_ca":true},{"name":"Daren K. Heyland","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1439918698162425,"gpt":0.4404401328773024,"spread":0.2964482630610599,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002113606,0.0008778016,0.002951863,0.001063365,0.0001119449,0.0000361717,0.0007366662,0.0005057104,0.0002274272],"category_scores_gemma":[0.0001028204,0.000891894,0.001187671,0.0004434404,0.0003053836,0.0001539009,0.0002302366,0.002055566,0.0002099594],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002920368,"about_ca_system_score_gemma":0.00004751729,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001364149,"about_ca_topic_score_gemma":0.00001276177,"domain_scores_codex":[0.9937058,0.00116605,0.002308309,0.001223683,0.0002962807,0.001299872],"domain_scores_gemma":[0.9977673,0.00032044,0.0008062348,0.0005863804,0.00004143328,0.0004781837],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005756365,0.000782009,0.001247114,0.006620026,0.00007178441,0.00001493836,0.00004771468,0.000001960255,9.045122e-8,0.00001450948,0.3838811,0.6067432],"study_design_scores_gemma":[0.004316215,0.0008336836,0.0001080665,0.01193469,0.0001248327,0.001065167,0.000004181884,0.00001783856,6.191361e-8,0.0001598261,0.9811356,0.0002998204],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00002624061,0.9548935,0.00027809,0.009312274,0.03411679,0.0010968,0.0001065962,0.0001617237,0.000007947935],"genre_scores_gemma":[0.000009240666,0.9926036,0.0001510247,0.001562068,0.004256977,0.0002575566,0.001048995,0.0001037305,0.000006830813],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.6064433,"threshold_uncertainty_score":0.9993532,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2085416352","doi":"10.1097/mog.0b013e3283572ffa","title":"On communication between gut microbes and the brain","year":2012,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":136,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University","funders":"","keywords":"Gut flora; Gut–brain axis; Neuroscience; Central nervous system; Biology; Hypothalamus; Vagus nerve; Immunology","authors":[{"name":"Paul Forsythe","is_ca":true},{"name":"Wolfgang Kunze","is_ca":true},{"name":"John Bienenstock","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07213641142530723,"gpt":0.3853407558673829,"spread":0.3132043444420757,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000601393,0.0002890094,0.0007355269,0.0001101945,0.00007862294,0.00001677973,0.0003922336,0.000269496,0.000008167855],"category_scores_gemma":[0.00004271254,0.0002006515,0.000168844,0.00005157251,0.000301205,0.000002397674,0.0003337685,0.0005098835,0.00001935825],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002949693,"about_ca_system_score_gemma":0.00004805426,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007770343,"about_ca_topic_score_gemma":0.00001441059,"domain_scores_codex":[0.9976877,0.001038288,0.0004954265,0.0003487619,0.00005032555,0.0003795156],"domain_scores_gemma":[0.9989253,0.0001276372,0.0002898318,0.0005679218,0.00001986028,0.00006945155],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003317003,0.000270252,0.007400468,0.01161677,0.0002016108,1.336084e-7,0.0001497601,4.918333e-7,0.00002846712,0.001494335,0.033288,0.945218],"study_design_scores_gemma":[0.00102456,0.0001769093,0.001609104,0.001883183,0.00006101481,0.00002581617,0.000004066941,2.261147e-7,3.331822e-7,0.00004000188,0.995071,0.0001038207],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0009832472,0.9966882,0.0000534561,0.000571107,0.0009748382,0.0006306439,0.00007485363,0.000005402647,0.00001819921],"genre_scores_gemma":[0.001174047,0.9963009,0.00003444566,0.0001555438,0.0004903839,0.0001008887,0.001698432,0.00002720751,0.00001811882],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.961783,"threshold_uncertainty_score":0.8182331,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2000160850","doi":"10.1097/00001574-200101000-00005","title":"Pathogenesis of Helicobacter pylori infection","year":2001,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":126,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Helicobacter pylori; Gastritis; Disease; Pathogenesis; Helicobacter pylori infection; Peptic ulcer; Immunology; Pathophysiology; Medicine; Population; Helicobacter; Gastroenterology; Internal medicine","authors":[{"name":"Billy Bourke","is_ca":false},{"name":"Nicola L. Jones","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04402983476469041,"gpt":0.3217360223745885,"spread":0.2777061876098981,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002736852,0.0002994203,0.0006803958,0.0006064553,0.00004184892,0.000005535413,0.0001191641,0.0001708045,0.0001072085],"category_scores_gemma":[0.000113264,0.0002852513,0.0001781007,0.0003933587,0.0002401235,0.0001172366,0.0001402738,0.0004638323,0.00005099145],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001278086,"about_ca_system_score_gemma":0.00003511952,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003666535,"about_ca_topic_score_gemma":0.00004452054,"domain_scores_codex":[0.9975994,0.0002154554,0.0008258228,0.0004842985,0.0002124925,0.0006625425],"domain_scores_gemma":[0.9989395,0.00004151739,0.0002523952,0.0003974851,0.0002166415,0.0001524675],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001488146,0.0006652179,0.9889796,0.0001582167,0.0001233732,0.000008363872,0.0001598924,0.00001676435,0.001543427,0.00002460375,0.0008086986,0.00602363],"study_design_scores_gemma":[0.003708566,0.001697819,0.9805245,0.0002898473,0.00005927698,0.0003533954,0.00002583322,0.00006926284,0.00006456507,0.00002435211,0.01309226,0.00009027617],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910593,0.0005238016,0.00107873,0.001665928,0.00507365,0.0004146099,0.00001648882,0.00007541355,0.00009208387],"genre_scores_gemma":[0.994567,0.004293676,0.0001850903,0.0002194292,0.0004794374,0.00009978528,0.000100294,0.00003276124,0.00002254694],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01228356,"threshold_uncertainty_score":0.9999599,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2461901323","doi":"10.1097/mog.0b013e3283476e8f","title":"Role of the lymphatic system in the pathogenesis of Crohnʼs disease","year":2011,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Lymphatic System and Diseases","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Lymphatic system; Immune system; Lymph; Lymphangiogenesis; Medicine; Lymphedema; Pathogenesis; Lymph node; Immunology; Pathology; Disease; Inflammatory bowel disease; Lymphangitis; Internal medicine; Metastasis","authors":[{"name":"Pierre‐Yves von der Weid","is_ca":true},{"name":"Sonia Rehal","is_ca":false},{"name":"Jose G. Ferraz","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06910903160357368,"gpt":0.3425521625957491,"spread":0.2734431309921754,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004400982,0.0003283432,0.001667891,0.0003036998,0.00001998007,0.000004462592,0.0005799682,0.0001158173,0.00002149848],"category_scores_gemma":[0.0001386001,0.0001702378,0.0006402599,0.0003071296,0.000153561,0.00002584677,0.0001469637,0.00006371474,0.000007839122],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000139505,"about_ca_system_score_gemma":0.0004037745,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000265169,"about_ca_topic_score_gemma":0.000004456288,"domain_scores_codex":[0.9964625,0.001226348,0.001358673,0.0003395277,0.0002912729,0.0003217031],"domain_scores_gemma":[0.9979239,0.0001663609,0.000849248,0.0008937755,0.00006157847,0.0001051234],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004970931,0.001910544,0.598191,0.2774548,0.0001670883,0.000008832866,0.0005927763,0.000001604687,8.998127e-7,0.001084884,0.0004592105,0.1196312],"study_design_scores_gemma":[0.004899643,0.0006313515,0.5456388,0.2731084,0.002817489,0.0004243344,0.001132703,0.00006281139,3.565909e-7,0.00008338478,0.1708766,0.0003241021],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002985868,0.9930904,0.000008200167,0.00001810626,0.001862733,0.001771353,0.0001984714,0.000009075438,0.00005578377],"genre_scores_gemma":[0.08806088,0.9109817,0.000006032489,0.00001899039,0.0002174541,0.000560212,0.0001205142,0.00003060789,0.000003688381],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.1704174,"threshold_uncertainty_score":0.6942097,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2034048156","doi":"10.1097/mog.0b013e32832b12ef","title":"The evolving epidemiology of inflammatory bowel disease","year":2009,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"","keywords":"Inflammatory bowel disease; Disease; Medicine; Epidemiology; Comorbidity; Ulcerative colitis; Intensive care medicine; Crohn's disease; Risk factor; Clostridium difficile; Irritable bowel syndrome; Immunology; Pathology; Internal medicine; Biology","authors":[{"name":"Fergus Shanahan","is_ca":false},{"name":"Çharles N. Bernstein","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04419963385808779,"gpt":0.3548566765170846,"spread":0.3106570426589968,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001144661,0.0005606866,0.001084653,0.0002125714,0.00009587279,0.000008402359,0.0009032376,0.0003515512,0.00001194327],"category_scores_gemma":[0.0009892564,0.0004333291,0.0007441597,0.00007925718,0.0004596457,0.000006452537,0.0003866215,0.0005429558,0.00002003728],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007542034,"about_ca_system_score_gemma":0.0004173012,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":8.591904e-7,"about_ca_topic_score_gemma":0.00001068892,"domain_scores_codex":[0.9947664,0.001879451,0.001644006,0.0007522592,0.0001475463,0.0008103551],"domain_scores_gemma":[0.9973327,0.0001782868,0.001031716,0.001088238,0.0001064903,0.0002625545],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001619638,0.0005716348,0.3784736,0.03456091,0.0004120105,0.00003609579,0.00002980891,0.0001351609,0.00000240083,0.001364506,0.026444,0.5563502],"study_design_scores_gemma":[0.0005682346,0.000196657,0.08577395,0.004694037,0.0001172272,0.00001909985,0.000004844168,0.00003673184,8.421375e-8,0.0001722614,0.9081529,0.000263909],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0007223549,0.9944708,0.0001181166,0.00005111961,0.003679168,0.0008279711,0.00009709508,0.0000145488,0.00001884751],"genre_scores_gemma":[0.0003176231,0.9976881,0.00003621024,0.00004255093,0.0008846606,0.0002704833,0.000688579,0.0000514286,0.00002036952],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.881709,"threshold_uncertainty_score":0.9998118,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2014346876","doi":"10.1097/mog.0b013e328354be1e","title":"Classification of inflammatory bowel disease","year":2012,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":99,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Ulcerative colitis; Inflammatory bowel disease; Medicine; Disease; Crohn's disease; Inflammatory Bowel Diseases; Colonoscopy; Clinical phenotype; Intensive care medicine; Internal medicine; Phenotype; Colorectal cancer; Cancer","authors":[{"name":"Séverine Vermeire","is_ca":false},{"name":"Gert Van Assche","is_ca":false},{"name":"Paul Rutgeerts","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05396443874431671,"gpt":0.3419586185422474,"spread":0.2879941797979307,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003190693,0.0004344975,0.0006548627,0.0002857925,0.0000261803,0.000007878146,0.0004598539,0.0002967773,0.00003329862],"category_scores_gemma":[0.00006883297,0.0004295576,0.0004478542,0.00006862466,0.0002038856,0.000008144007,0.000256882,0.0003112909,0.00004594439],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006286218,"about_ca_system_score_gemma":0.0002756405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":4.034388e-7,"about_ca_topic_score_gemma":0.00000371077,"domain_scores_codex":[0.9972408,0.000568127,0.000978487,0.0005449483,0.0001682768,0.0004993917],"domain_scores_gemma":[0.998188,0.00001484056,0.0006840692,0.0007754504,0.00007448232,0.0002631157],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001298866,0.001365177,0.5188883,0.1106996,0.0003113272,0.00001179146,0.00005125845,0.00002073386,0.00003537802,0.0008204341,0.005693286,0.3608038],"study_design_scores_gemma":[0.0004976805,0.00007021084,0.1277641,0.002910546,0.0001673201,0.000008259322,0.000004190946,0.00000912775,2.666614e-7,0.00001016128,0.8683339,0.000224208],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.003676858,0.9912592,0.0001033126,0.000008844456,0.003962222,0.0007543333,0.0001992507,0.00001350689,0.0000224555],"genre_scores_gemma":[0.002457991,0.9937418,0.00002244756,0.00000856999,0.0009820573,0.0003757748,0.002337024,0.00006105972,0.00001324934],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8626407,"threshold_uncertainty_score":0.9998156,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3202817071","doi":"10.1097/mog.0000000000000778","title":"Breastfeeding and the developmental origins of mucosal immunity: how human milk shapes the innate and adaptive mucosal immune systems","year":2021,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Infant Nutrition and Health","field":"Nursing","cited_by":74,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; Children's Hospital Research Institute of Manitoba; Dalhousie University","funders":"","keywords":"Mucosal immunity; Breastfeeding; Acquired immune system; Innate immune system; Immunology; Immune system; Immunity; Biology; Medicine; Pathology","authors":[{"name":"Bassel Dawod","is_ca":true},{"name":"Jean S. Marshall","is_ca":true},{"name":"Meghan B. Azad","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0833597995204449,"gpt":0.3611127599723132,"spread":0.2777529604518684,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001160766,0.0004619311,0.001767898,0.0003405114,0.0003680774,0.00009873786,0.0003821155,0.0002097475,0.000007153877],"category_scores_gemma":[0.00005602114,0.0002978602,0.0002153418,0.0002242218,0.0007470894,0.00008280822,0.000404383,0.001176461,0.000001278498],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002666583,"about_ca_system_score_gemma":0.000102254,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001944474,"about_ca_topic_score_gemma":0.00003564923,"domain_scores_codex":[0.9957943,0.001965613,0.001023626,0.0004512051,0.0002335596,0.0005317228],"domain_scores_gemma":[0.9984711,0.0003174889,0.0007798919,0.0002375686,0.0001138807,0.00008002356],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00341961,0.001296306,0.01384813,0.1014756,0.001486074,0.00001417775,0.009372319,0.000003185128,0.00003044952,0.05220555,0.005048247,0.8118003],"study_design_scores_gemma":[0.008922436,0.0009292666,0.007671518,0.05453475,0.0004684958,0.002178615,0.002987564,0.0003000544,0.000001415779,0.00007621523,0.921387,0.0005427384],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.003796348,0.9885463,0.0000442317,0.001426729,0.004693069,0.001315083,0.0001448606,0.00002128064,0.00001215268],"genre_scores_gemma":[0.02506014,0.9738069,0.00004735297,0.00004354457,0.0004429854,0.0002260209,0.0003268055,0.00004243921,0.000003837628],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9163387,"threshold_uncertainty_score":0.9999474,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2046409626","doi":"10.1097/mog.0b013e3283573017","title":"The impact of gut microbes in allergic diseases","year":2012,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Genome British Columbia","keywords":"Hygiene hypothesis; Immune system; Immunology; Microbiome; Gut flora; Allergy; Disease; Atopy; Biology; Gut microbiome; Commensalism; Food allergy; Mucosal immunity; Allergic inflammation; Immunity; Medicine; Bioinformatics; Bacteria","authors":[{"name":"Shannon Russell","is_ca":true},{"name":"B. Brett Finlay","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05980758268923136,"gpt":0.4050714880123746,"spread":0.3452639053231432,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002322839,0.0003441886,0.0008609776,0.0001729649,0.00003421649,0.000009219136,0.0004375227,0.0002377673,0.00001532563],"category_scores_gemma":[0.00002681329,0.0002281881,0.0004901894,0.0001041779,0.0001650535,0.000002911846,0.0002454546,0.0003345733,0.000009579006],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008197527,"about_ca_system_score_gemma":0.0002301839,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003084455,"about_ca_topic_score_gemma":0.00006492263,"domain_scores_codex":[0.9977213,0.0004611191,0.0007610462,0.0003682412,0.00005729203,0.000630965],"domain_scores_gemma":[0.9990045,0.00003409662,0.0003892826,0.0004417253,0.00003147675,0.00009894243],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007606581,0.002301608,0.2245909,0.02639197,0.0005196203,0.000001898523,0.0001150035,0.00003357978,0.0005444166,0.00007411474,0.02621293,0.7184533],"study_design_scores_gemma":[0.0006137221,0.0005039042,0.02681712,0.0025216,0.00004373567,0.00004146781,0.000006927867,0.000001175578,7.142624e-7,0.000007567339,0.9692909,0.0001512071],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.005813937,0.9916406,0.000008998289,0.00001927169,0.001842429,0.0004826858,0.0001827382,0.000003114598,0.000006194227],"genre_scores_gemma":[0.003862562,0.99463,0.000008787516,0.000005376773,0.00040539,0.00008380163,0.0009661334,0.00002864817,0.000009265495],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9430779,"threshold_uncertainty_score":0.930524,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2022719586","doi":"10.1097/mog.0000000000000037","title":"Risk factors and management of osteoporosis in inflammatory bowel disease","year":2014,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Bone health and osteoporosis research","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Osteoporosis; Ulcerative colitis; Inflammatory bowel disease; Disease; Bone mineral; Crohn's disease; Internal medicine; Population; FRAX; Bone density; Osteoporotic fracture; Environmental health","authors":[{"name":"Laura E. Targownik","is_ca":false},{"name":"Çharles N. Bernstein","is_ca":false},{"name":"William D. Leslie","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05629949077272511,"gpt":0.3894083032023062,"spread":0.3331088124295811,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006446818,0.0004267672,0.001793422,0.0009154193,0.00002850003,0.000009148008,0.0001921576,0.0002113203,0.00003130423],"category_scores_gemma":[0.00007975412,0.0003435292,0.0002682012,0.0001940005,0.0002091698,0.0000417582,0.0002736796,0.000927925,0.00001073245],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001793309,"about_ca_system_score_gemma":0.0001438953,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003604565,"about_ca_topic_score_gemma":0.00002068304,"domain_scores_codex":[0.9963987,0.0006190226,0.001372984,0.0006185537,0.0003203423,0.0006703445],"domain_scores_gemma":[0.998323,0.0001285665,0.0005339849,0.0005012598,0.00004292808,0.0004702181],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002648257,0.0002563078,0.6742299,0.1624082,0.00004545472,0.000006444364,0.00004381824,7.770199e-7,1.181558e-8,0.00002893131,0.0003048871,0.1624105],"study_design_scores_gemma":[0.002361468,0.0005578728,0.5581544,0.04214752,0.0002158186,0.00001017885,0.00004120504,0.00002823819,2.842001e-8,0.00001255573,0.3963264,0.000144292],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.03215251,0.9642779,0.000009716123,0.00006386131,0.001369927,0.001991263,0.0001063554,0.00001568862,0.00001281269],"genre_scores_gemma":[0.001838945,0.9972301,0.00004309693,0.00001186055,0.0001050526,0.000331613,0.0003909897,0.00004048182,0.000007856774],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.3960215,"threshold_uncertainty_score":0.9999017,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1965018721","doi":"10.1097/mog.0b013e328361f488","title":"Metabolomics","year":2013,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Oesterreichische Nationalbank; Austrian Science Fund; Fondation pour la Recherche Médicale; Deutsche Forschungsgemeinschaft","keywords":"Metabolomics; Metabolite; Biomarker discovery; Metabolome; Biomarker; Microbiome; Inflammatory bowel disease; Urine; Medicine; Disease; Computational biology; Chemistry; Biology; Bioinformatics; Proteomics; Biochemistry; Pathology; Internal medicine","authors":[{"name":"Martin Storr","is_ca":false},{"name":"Hans J. Vogel","is_ca":true},{"name":"Rudolf Schicho","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07295224319680399,"gpt":0.3688429325724888,"spread":0.2958906893756848,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002417735,0.0005568346,0.001591272,0.0003591974,0.00004249797,0.0000259557,0.0005153095,0.0003444446,0.00005998978],"category_scores_gemma":[0.00007958466,0.0004754027,0.0004903963,0.0001648231,0.0001270766,0.000003690424,0.0005274542,0.0004756512,0.00009418348],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004031008,"about_ca_system_score_gemma":0.00008588714,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003939459,"about_ca_topic_score_gemma":0.000005994348,"domain_scores_codex":[0.9973268,0.000314964,0.000803988,0.0007992937,0.0001134401,0.0006415506],"domain_scores_gemma":[0.998849,0.00002014897,0.0003959739,0.0005772173,0.00005214178,0.0001054773],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004750252,0.0003129779,0.001029003,0.007726668,0.0004392561,8.206497e-7,0.0000118752,0.000001983919,0.00003020195,0.0006049712,0.04016322,0.9496315],"study_design_scores_gemma":[0.0003876194,0.0002344353,0.00005712626,0.0007410205,0.00008995576,0.00003506819,0.000005469436,0.000001796035,0.000001635912,0.00003527467,0.9981751,0.0002354699],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001229966,0.9910263,0.0002986594,0.00002552933,0.007658167,0.0006937861,0.00008383303,0.00001237239,0.00007836452],"genre_scores_gemma":[0.00001000916,0.9968613,0.0003590384,0.00002430865,0.00118626,0.0004757673,0.0009398219,0.00005990006,0.0000835599],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9580119,"threshold_uncertainty_score":0.9997697,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2937531717","doi":"10.1097/mog.0000000000000534","title":"The globalization of inflammatory bowel disease","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Incidence (geometry); Epidemiology; Inflammatory bowel disease; Ulcerative colitis; Medicine; Disease; Population; Developed country; Crohn's disease; Demography; Environmental health; Internal medicine","authors":[{"name":"Abel Botelho Quaresma","is_ca":false},{"name":"Gilaad G. Kaplan","is_ca":true},{"name":"Paulo Gustavo Kotze","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03112015334119365,"gpt":0.3334545106408161,"spread":0.3023343572996224,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003183158,0.0003743487,0.0005398336,0.0001232912,0.00004935671,0.00001736528,0.0006074676,0.0002126319,0.000008860964],"category_scores_gemma":[0.0001379226,0.0002932814,0.0004299599,0.00007124055,0.0002164588,0.000004985546,0.0003374925,0.0002310843,0.00003366417],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005759374,"about_ca_system_score_gemma":0.0003779777,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":5.012236e-7,"about_ca_topic_score_gemma":0.000006733654,"domain_scores_codex":[0.99742,0.0005982612,0.0008783382,0.0005011497,0.0001810372,0.0004212321],"domain_scores_gemma":[0.9983056,0.00002758381,0.0006194317,0.0008271371,0.00008899972,0.0001312332],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0032694,0.0008682113,0.3154835,0.1522342,0.0007122318,0.00002390472,0.00004963479,0.0004568728,0.000007703312,0.003144485,0.03946456,0.4842853],"study_design_scores_gemma":[0.0005123802,0.00008878891,0.01272578,0.0032068,0.0001020102,0.000005866472,0.000003901333,0.00002648616,1.483289e-7,0.00002238255,0.9831419,0.0001635395],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0008558845,0.9924308,0.00012473,0.00001466733,0.005414875,0.0009558741,0.0001716842,0.000009260564,0.00002219541],"genre_scores_gemma":[0.0002208862,0.9977853,0.000006010417,0.00001264909,0.0004662386,0.0001960706,0.001241438,0.00004364747,0.00002774636],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9436774,"threshold_uncertainty_score":0.999952,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2011051662","doi":"10.1097/mog.0000000000000018","title":"The changing epidemiology of Clostridium difficile infection","year":2013,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Epidemiology; Clostridium difficile; Medicine; Intensive care medicine; Incidence (geometry); Internal medicine; Antibiotics; Microbiology; Biology","authors":[{"name":"Hitoshi Honda","is_ca":false},{"name":"Erik R. Dubberke","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1605452204863267,"gpt":0.4356583875099579,"spread":0.2751131670236312,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001387496,0.00059108,0.002865435,0.001093433,0.0001366064,0.00001114694,0.0003922062,0.0004899636,0.0001167447],"category_scores_gemma":[0.0009745806,0.0003937288,0.0008955444,0.0007377894,0.0004659259,0.00004602209,0.0004398428,0.001751496,0.0001372509],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000417999,"about_ca_system_score_gemma":0.0003341958,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005629371,"about_ca_topic_score_gemma":0.000009155145,"domain_scores_codex":[0.994377,0.001158982,0.002059762,0.0007190881,0.0003126623,0.001372527],"domain_scores_gemma":[0.9965733,0.001258483,0.0009104123,0.0008425555,0.0001926769,0.0002225848],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002168501,0.0005498393,0.007620115,0.02450277,0.0002297013,0.000002704945,0.00004217158,0.000003655413,0.000003668383,0.0002612396,0.006480755,0.9600865],"study_design_scores_gemma":[0.0009911356,0.001029501,0.000413714,0.01233105,0.0002182434,0.0002243743,0.00002554203,0.00008961673,0.00001255908,0.00002742295,0.9844478,0.0001890601],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002847793,0.9886104,0.00008160675,0.0003081475,0.005978418,0.002028038,0.00005352141,0.00004192357,0.00005014621],"genre_scores_gemma":[0.0003869972,0.9970799,0.00002484944,0.0000127299,0.001242536,0.0006871053,0.0004213901,0.00006623763,0.00007824665],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.977967,"threshold_uncertainty_score":0.9998515,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1981762250","doi":"10.1097/mog.0b013e32834dda51","title":"Recent advances in Helicobacter pylori pathogenesis","year":2011,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Hospital for Sick Children; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"CagA; Disease; Helicobacter pylori; Pathogenesis; Immunology; Mechanism (biology); Microbiome; Medicine; Biology; Inflammatory bowel disease; Bioinformatics; Gene; Genetics; Virulence; Pathology","authors":[{"name":"Michal Sibony","is_ca":true},{"name":"Nicola L. Jones","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08959892380025195,"gpt":0.3694267484091646,"spread":0.2798278246089126,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005943842,0.001237744,0.004380672,0.001880597,0.00005378482,0.00001574626,0.0005574089,0.0007609747,0.0002134555],"category_scores_gemma":[0.0002055474,0.001075857,0.0006155557,0.0008328115,0.0003686518,0.0002262404,0.0004966531,0.00227276,0.0002792356],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006905941,"about_ca_system_score_gemma":0.0002176122,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005801473,"about_ca_topic_score_gemma":0.00008962608,"domain_scores_codex":[0.9928794,0.001004462,0.00251589,0.001585406,0.0002879166,0.001726961],"domain_scores_gemma":[0.9975705,0.0001216923,0.0008237053,0.0009576418,0.0001899493,0.0003365079],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005137376,0.0008324088,0.1325193,0.00934511,0.0002090649,0.00003795324,0.0001292642,5.576999e-7,1.893374e-7,0.00001726887,0.000672124,0.8557231],"study_design_scores_gemma":[0.002638896,0.001211709,0.01731514,0.02049285,0.0003712543,0.0004623919,0.00002193633,0.00000197746,8.649864e-8,0.00001445905,0.9571368,0.0003325316],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0006034914,0.9844028,0.00004261313,0.0002871402,0.01244752,0.001887116,0.000118625,0.0001039829,0.000106649],"genre_scores_gemma":[0.00002055299,0.9968005,0.0001252443,0.0001570545,0.0008388664,0.001140963,0.0007520994,0.0001442319,0.00002051811],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9564646,"threshold_uncertainty_score":0.9991692,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3205835113","doi":"10.1097/mog.0000000000000798","title":"Why antibiotics should not be used to treat Shiga toxin-producing Escherichia coli infections","year":2021,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Alberta Children’s Hospital Foundation; Alberta Children's Hospital","funders":"","keywords":"Antibiotics; Pathogen; Diarrhea; Escherichia coli; Acute diarrhea","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.08418756982635925,"gpt":0.3674309835052726,"spread":0.2832434136789134,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002832861,0.0002743129,0.0003404519,0.000146673,0.0001247337,0.00004314534,0.0002451327,0.0001407833,0.00003696665],"category_scores_gemma":[0.0005972634,0.0002927543,0.0001229148,0.0003455107,0.0001300622,0.000009244802,0.0006191755,0.0003659727,0.000009912784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006900934,"about_ca_system_score_gemma":0.0001162643,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003374556,"about_ca_topic_score_gemma":0.0006068111,"domain_scores_codex":[0.9975739,0.0003293084,0.0003784306,0.0007851689,0.0002376181,0.000695644],"domain_scores_gemma":[0.9989251,0.00004088394,0.00007770008,0.0005622196,0.0002016499,0.0001924654],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003467975,0.0008557121,0.3859315,0.000197911,0.00008310697,0.000006101056,0.0002838803,0.0005365848,0.5698255,0.0001065349,0.04145896,0.0003674114],"study_design_scores_gemma":[0.005663709,0.004918055,0.3152531,0.0003671364,0.00006263387,0.00007341851,0.0005472856,0.0003750756,0.1950777,0.00004073252,0.4767309,0.0008902469],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9851753,0.0005530973,0.002319671,0.008942207,0.002502037,0.0003500614,0.00005597918,0.00002847868,0.00007313504],"genre_scores_gemma":[0.9941646,0.001155415,0.0008409314,0.002652835,0.0007444621,0.00004815467,0.0002532293,0.0000414724,0.00009892431],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4352719,"threshold_uncertainty_score":0.9999524,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2943722528","doi":"10.1097/mog.0000000000000543","title":"The potential role of potassium-competitive acid blockers in the treatment of gastroesophageal reflux disease","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Gastroesophageal reflux and treatments","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Population Health Research Institute","funders":"","keywords":"GERD; Medicine; Heartburn; Gastric acid; Gastroenterology; Reflux; Internal medicine; Disease; Esophagitis; Esophagus; Pathogenesis; Secretion","authors":[{"name":"Carmelo Scarpignato","is_ca":false},{"name":"Richard H. Hunt","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04593718473092909,"gpt":0.3672529754573396,"spread":0.3213157907264105,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003080966,0.0006796322,0.002260871,0.0004544925,0.00005766972,0.00001504619,0.00051411,0.0001760121,0.00003079152],"category_scores_gemma":[0.00004488214,0.0003664901,0.001001068,0.0002949444,0.0004025465,0.00004687118,0.00009806264,0.0005429228,0.00002676224],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003496076,"about_ca_system_score_gemma":0.0003214089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001095767,"about_ca_topic_score_gemma":0.000006923543,"domain_scores_codex":[0.9956882,0.0008946851,0.001462594,0.0006558344,0.000499133,0.0007995763],"domain_scores_gemma":[0.9977095,0.0002042546,0.0008701207,0.0009456087,0.0000909694,0.0001795356],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003428239,0.01133866,0.2313393,0.016589,0.001354293,0.0003276443,0.0006846768,0.00001727562,0.000004632326,0.0005439199,0.0003938575,0.7339785],"study_design_scores_gemma":[0.02680039,0.02864093,0.2421208,0.02794706,0.00622007,0.000712754,0.0007497665,0.0001066796,0.00001304031,0.0002463046,0.665943,0.0004991196],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.008046113,0.9863443,0.00000686794,0.000136166,0.002202604,0.00280425,0.0004121969,0.00001181753,0.00003570975],"genre_scores_gemma":[0.08133326,0.9169037,0.00005130643,0.00001037063,0.0002900718,0.0004906711,0.0008480852,0.00004694415,0.00002558501],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7334794,"threshold_uncertainty_score":0.9998787,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2062445136","doi":"10.1097/mog.0b013e328333d73b","title":"Bacterial infections: new and emerging enteric pathogens","year":2009,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta; University of Toronto; SickKids Foundation; Stollery Children's Hospital; Hospital for Sick Children","funders":"","keywords":"Campylobacter jejuni; Microbiology; Virulence; Biology; Campylobacter; Escherichia coli; Salmonella; Flagellin; Virology; Bacteria; Gene","authors":[{"name":"Philip M. Sherman","is_ca":true},{"name":"Juan C. Ossa","is_ca":true},{"name":"Eytan Wine","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08691015048786292,"gpt":0.3457954148321684,"spread":0.2588852643443055,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002700894,0.000449995,0.001388836,0.00009790482,0.00007306871,0.00003719267,0.0002823414,0.0003147405,0.00019006],"category_scores_gemma":[0.00006965163,0.000202302,0.000308631,0.000250947,0.00007058276,0.00007381399,0.0001807259,0.0004801626,0.00003508741],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006180401,"about_ca_system_score_gemma":0.000022567,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003288139,"about_ca_topic_score_gemma":0.00007554007,"domain_scores_codex":[0.9970611,0.0007075861,0.0008410014,0.0006961946,0.00008388863,0.0006102466],"domain_scores_gemma":[0.9991174,0.0002059636,0.0003829414,0.0001025697,0.00001888726,0.0001722609],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002023327,0.00009219821,0.006875546,0.0004065265,0.00001580413,0.000001075478,0.00001188085,8.54441e-8,0.000007284529,0.00001912368,0.001819478,0.9907308],"study_design_scores_gemma":[0.0002096375,0.0006227548,0.01099994,0.002017034,0.00004844348,0.0001383415,0.000006410683,0.00000231403,2.15145e-8,0.0001139663,0.9856535,0.0001876753],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00618309,0.9865108,0.0000147469,0.0002166557,0.00647817,0.0004548777,0.00006696104,0.00005791893,0.0000168397],"genre_scores_gemma":[0.0001340476,0.9966233,0.00001809109,0.00005140881,0.002313171,0.00005769949,0.0007883432,0.000003031695,0.0000108788],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9905431,"threshold_uncertainty_score":0.8249637,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2328834015","doi":"10.1097/mog.0000000000000132","title":"Ondansetron and probiotics in the management of pediatric acute gastroenteritis in developed countries","year":2014,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary; Hospital for Sick Children; Alberta Children's Hospital; SickKids Foundation; University of Toronto","funders":"","keywords":"Ondansetron; Medicine; Intensive care medicine; Acute gastroenteritis; Randomized controlled trial; Emergency department; Clinical trial; Diarrhea; Pediatrics; Surgery; Vomiting; Internal medicine; Psychiatry","authors":[{"name":"David Schnadower","is_ca":false},{"name":"Yaron Finkelstein","is_ca":true},{"name":"Stephen B. Freedman","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08836968830322127,"gpt":0.417354617225219,"spread":0.3289849289219977,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001396239,0.0005115225,0.002605063,0.001139457,0.00002526082,0.00001770188,0.0004721733,0.0002308496,0.00001588744],"category_scores_gemma":[0.00005959629,0.0003859647,0.0002261683,0.0004372074,0.0003173846,0.00006407037,0.0003464253,0.001176748,0.000008630614],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002246019,"about_ca_system_score_gemma":0.0001079282,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001729213,"about_ca_topic_score_gemma":0.00009729656,"domain_scores_codex":[0.9947718,0.001259112,0.001866964,0.0006936701,0.0003066349,0.001101859],"domain_scores_gemma":[0.9988256,0.00007858621,0.0004721484,0.0004434366,0.00005101005,0.000129206],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001881753,0.001136408,0.6471053,0.1530109,0.0003544573,0.000253244,0.0002431824,0.000003947546,2.155657e-7,0.0002852474,0.003224589,0.1925008],"study_design_scores_gemma":[0.01065279,0.007169587,0.2509687,0.06217708,0.0007045037,0.001861637,0.0001671566,0.00005554994,5.113726e-8,0.00006900849,0.6657626,0.0004113187],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01702099,0.9777368,0.0002376518,0.0006514632,0.001360663,0.002799263,0.000156239,0.00001510866,0.00002182544],"genre_scores_gemma":[0.003060841,0.9950759,0.0006422892,0.00008167952,0.0002201531,0.0004045294,0.0004702499,0.00003687675,0.000007495408],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.662538,"threshold_uncertainty_score":0.9998592,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2040244759","doi":"10.1097/00001574-200401000-00006","title":"Role of probiotics in the modulation of intestinal infections and inflammation","year":2003,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario","funders":"","keywords":"Probiotic; Immune system; Biology; Immunology; Disease; Innate immune system; Inflammation; Microbiology; Pathogenesis; Antibiotics; Bacteria; Medicine; Genetics","authors":[{"name":"David R. Mack","is_ca":true},{"name":"Sylvie Lebel","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0258335833220177,"gpt":0.2605201736657753,"spread":0.2346865903437576,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000216749,0.00004911268,0.00008595864,0.00003035111,0.0000161045,0.00000398545,0.00005759176,0.00003061033,0.000008282983],"category_scores_gemma":[0.00004562685,0.00002093605,0.0000175808,0.0001388935,0.00005538161,0.00003728094,0.00001802142,0.00008819762,2.304655e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007563758,"about_ca_system_score_gemma":0.000002809868,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001196698,"about_ca_topic_score_gemma":0.0001093012,"domain_scores_codex":[0.9994137,0.0001297187,0.0002283434,0.00008436845,0.00004826422,0.00009559996],"domain_scores_gemma":[0.9997909,0.00004590025,0.00009803539,0.00002723352,0.00002708408,0.00001085631],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000322829,0.0002317374,0.9534234,0.00002915911,0.000002091176,2.308391e-8,0.0002024604,0.0001509861,0.03506866,0.003886349,0.000007927793,0.006964872],"study_design_scores_gemma":[0.0002135618,0.0006895186,0.9951119,0.00006001215,0.000001766332,0.000007328403,0.0001785896,0.001232728,0.000307169,0.001883749,0.0002892007,0.00002451344],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993542,0.00008526196,0.00004299343,0.0001517243,0.0001528076,0.0001561117,0.000004751839,0.000002274667,0.00004980643],"genre_scores_gemma":[0.9998228,0.00007379267,0.00004932502,0.000003380739,0.00002234184,0.000006739827,0.0000211568,2.562171e-7,2.382197e-7],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04168841,"threshold_uncertainty_score":0.08537472,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2254868269","doi":"10.1097/mog.0000000000000236","title":"Global challenges in acute diarrhea","year":2015,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; Centre for Global Health Research; Hospital for Sick Children","funders":"","keywords":"Diarrhea; Medicine; Rotavirus; Sanitation; Incidence (geometry); Child mortality; Psychological intervention; Acute diarrhea; Hygiene; Pediatrics; Environmental health; Intensive care medicine; Population; Internal medicine; Psychiatry","authors":[{"name":"Jai K Das","is_ca":false},{"name":"Zulfiqar A Bhutta","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2754073063749629,"gpt":0.4820649975478578,"spread":0.2066576911728949,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00109179,0.0006413739,0.003880857,0.0007487715,0.00001748124,0.00001134426,0.0004653967,0.0004997813,0.00004990229],"category_scores_gemma":[0.0002838954,0.0005481502,0.0005031135,0.000346542,0.0002540628,0.00008149083,0.0004259934,0.001360176,0.0001384074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009562938,"about_ca_system_score_gemma":0.0003550258,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002056195,"about_ca_topic_score_gemma":0.0001243523,"domain_scores_codex":[0.9941452,0.001471819,0.001489229,0.001027683,0.0003261178,0.001539946],"domain_scores_gemma":[0.9983976,0.0000396128,0.000321544,0.0006139961,0.00008565514,0.0005415743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000594591,0.0005475431,0.04180887,0.01546298,0.0001456394,0.0001299114,0.00002083336,0.000001208446,1.816811e-8,0.00008056941,0.01105571,0.9301521],"study_design_scores_gemma":[0.002664994,0.002035662,0.006867429,0.01879208,0.00009848882,0.001606308,0.00001348635,0.00001800007,1.559148e-9,0.0001222012,0.9676154,0.0001659008],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002252899,0.9923649,0.00003181836,0.001059565,0.004702671,0.001234569,0.000211482,0.00004462928,0.0001250688],"genre_scores_gemma":[0.0000967012,0.9974679,0.0001209382,0.00005072037,0.0007347466,0.0005200715,0.0009531221,0.00004517188,0.00001060753],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9565597,"threshold_uncertainty_score":0.999697,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2075179618","doi":"10.1097/01.mog.0000198074.52287.16","title":"Serrated mucosal lesions of the colorectum","year":2005,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Colorectal Cancer Screening and Detection","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Hyperplastic Polyp; Confusion; Pathology; Dysplasia; Medicine; Risk stratification; Colonoscopy; Colorectal cancer; Cancer; Internal medicine; Psychology","authors":[{"name":"Kristopher S. Cunningham","is_ca":true},{"name":"Robert H. Riddell","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1099982042819281,"gpt":0.402205224400861,"spread":0.292207020118933,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000192045,0.0002948831,0.001262369,0.0003225011,0.00004122076,0.000004968467,0.0002237441,0.0002479609,0.00007210654],"category_scores_gemma":[0.00008969673,0.0001977748,0.0004913145,0.0004430037,0.00014766,0.00002394648,0.0001578915,0.0009318165,0.0000128088],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002303167,"about_ca_system_score_gemma":0.0002725269,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001600221,"about_ca_topic_score_gemma":0.00005183232,"domain_scores_codex":[0.9979883,0.0003536112,0.000755985,0.0003751667,0.0001941303,0.0003327807],"domain_scores_gemma":[0.9989575,0.0000663575,0.0004371772,0.0003865577,0.00007147338,0.00008098075],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001179593,0.0002784728,0.002828324,0.008048124,0.00007645224,7.275214e-7,0.00004049862,0.00000705924,5.384944e-7,0.00001567406,0.004456929,0.9830676],"study_design_scores_gemma":[0.0008683878,0.001839272,0.003372718,0.01404368,0.0002200418,0.0002455918,0.000007151309,0.00006198015,7.226611e-7,0.000004130971,0.9792477,0.00008856675],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0009170121,0.9894108,0.00006134204,0.000169145,0.008358756,0.0009205192,0.0000508691,0.00003940642,0.00007216135],"genre_scores_gemma":[0.001331275,0.9976173,0.00003692357,0.0000213538,0.0006256483,0.0001683505,0.0001327398,0.00003005103,0.00003632869],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9829791,"threshold_uncertainty_score":0.8065023,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2028698520","doi":"10.1097/mog.0b013e328358e268","title":"Prevention of catheter-related blood stream infections in children with intestinal failure","year":2012,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Central Venous Catheters and Hemodialysis","field":"Health Professions","cited_by":34,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Intensive care medicine; Intestinal failure; Catheter; Blood stream; Psychological intervention; Population; Surgery; Parenteral nutrition; Internal medicine; Environmental health","authors":[{"name":"Hannah G. Piper","is_ca":true},{"name":"Paul W. Wales","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06980685616395843,"gpt":0.3981897602094532,"spread":0.3283829040454948,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005064434,0.0004764485,0.001793243,0.0009237949,0.0001014831,0.000004747551,0.0002951182,0.000328964,0.0002458619],"category_scores_gemma":[0.00004573885,0.0003833722,0.0004106717,0.0005134841,0.0001287551,0.0001033398,0.0001786926,0.001943391,0.00004121054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002522446,"about_ca_system_score_gemma":0.0002904022,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001624918,"about_ca_topic_score_gemma":0.000779984,"domain_scores_codex":[0.9952983,0.001393015,0.00169678,0.000517951,0.0001732068,0.000920794],"domain_scores_gemma":[0.9979195,0.0001686918,0.00125804,0.0004366153,0.00007638492,0.0001407458],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003960305,0.002955431,0.9002756,0.006869405,0.000254331,4.514537e-7,0.0004455583,0.000005146104,1.04759e-7,0.00007865291,0.0001021569,0.08897348],"study_design_scores_gemma":[0.01653044,0.0109311,0.2664557,0.2674803,0.007903804,0.001311542,0.0003895102,0.0000311431,3.356865e-7,0.0003230106,0.4267339,0.001909218],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.06690744,0.9266822,0.000157758,0.00004146015,0.002531836,0.003412174,0.0001797325,0.00005809205,0.00002931054],"genre_scores_gemma":[0.0175609,0.9797698,0.0001075672,0.000004632926,0.0003410379,0.0007532713,0.00137656,0.00006616701,0.00002010516],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.63382,"threshold_uncertainty_score":0.9998618,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2010985566","doi":"10.1097/01.mog.0000182861.11669.4d","title":"Irritable bowel syndrome and probiotics: from rationale to clinical use","year":2005,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Gastrointestinal motility and disorders","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Irritable bowel syndrome; Medicine; Clinical trial; Intensive care medicine; Probiotic; MEDLINE; Internal medicine","authors":[{"name":"Elena F. Verdú","is_ca":true},{"name":"Stephen M. Collins","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2014211565412544,"gpt":0.4355788603591567,"spread":0.2341577038179023,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003364315,0.0004206116,0.001781028,0.0003402871,0.00003524963,0.0000362195,0.0001730546,0.0002493491,0.0001061636],"category_scores_gemma":[0.0005337839,0.0003820843,0.0003031472,0.0001349569,0.0001718152,0.0001102262,0.0002146743,0.0009401435,0.0001280943],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001093801,"about_ca_system_score_gemma":0.0001634521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002189031,"about_ca_topic_score_gemma":0.00004578975,"domain_scores_codex":[0.9968356,0.0003637551,0.001284565,0.0008320632,0.0001779526,0.0005059984],"domain_scores_gemma":[0.9985887,0.0003308907,0.0002567281,0.000389857,0.00006990215,0.0003639393],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008293301,0.002437968,0.4386399,0.01500854,0.0002108705,0.00003443893,0.00007347245,0.00001112924,8.831809e-8,0.00007166903,0.01167594,0.5310067],"study_design_scores_gemma":[0.001668969,0.001838495,0.07995891,0.01994215,0.0002273824,0.0006890436,0.00001358804,0.00003491388,3.284394e-9,0.00003054924,0.8954382,0.0001577766],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.005526359,0.9875551,0.0004543534,0.000765316,0.003295457,0.002106177,0.0002419019,0.00004694916,0.000008314771],"genre_scores_gemma":[0.0001823936,0.9941369,0.003541692,0.0002129488,0.0005587505,0.00013096,0.00115235,0.0000402068,0.00004381751],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8837623,"threshold_uncertainty_score":0.9998631,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2029199787","doi":"10.1097/mog.0b013e328311d1cc","title":"Gastritis and gastric atrophy","year":2008,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hamilton Health Sciences; McMaster University","funders":"","keywords":"Gastritis; Helicobacter pylori; pernicious anemia; Medicine; Atrophic gastritis; Gastroenterology; Cancer; Atrophy; Disease; Internal medicine; Helicobacter; Chronic gastritis; Anemia","authors":[{"name":"Hala El‐Zimaity","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07640241108878165,"gpt":0.3611083386150234,"spread":0.2847059275262417,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001771799,0.001054892,0.00391622,0.001531035,0.0001068851,0.00001996027,0.0003047536,0.0005700626,0.00004035513],"category_scores_gemma":[0.0001558476,0.0009567023,0.0005845683,0.0005937727,0.0006881713,0.0000993521,0.0004795241,0.002279273,0.0001425341],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003354007,"about_ca_system_score_gemma":0.0001872076,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009675209,"about_ca_topic_score_gemma":0.000006476568,"domain_scores_codex":[0.9947483,0.0005803044,0.001670192,0.001308786,0.0003095251,0.001382894],"domain_scores_gemma":[0.9980803,0.0001377745,0.0005761259,0.0006526782,0.0001319543,0.0004211726],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003920875,0.0006769006,0.1799047,0.01696915,0.000695392,0.0001689574,0.00009104836,4.499809e-7,2.042367e-7,0.00000930271,0.02005481,0.781037],"study_design_scores_gemma":[0.003344704,0.002243285,0.01597863,0.01567602,0.0004405048,0.01405083,0.00001093787,0.000003675305,1.469177e-8,0.00000453221,0.9479759,0.0002709076],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001236368,0.9913772,0.00009116941,0.0003618296,0.005225838,0.001432071,0.0001360998,0.0001161667,0.00002326828],"genre_scores_gemma":[0.00004092604,0.9974326,0.0002834003,0.000119819,0.0008847475,0.0004257605,0.0007049358,0.00009117732,0.00001663531],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9279212,"threshold_uncertainty_score":0.9992883,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2047580104","doi":"10.1097/mog.0b013e32835a68ea","title":"Nod-like receptors in intestinal host defense","year":2012,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"The Wilson Centre; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Pattern recognition receptor; Context (archaeology); Immune system; Immunology; Immunity; Microbiology; Gut flora; Dysbiosis; Host (biology); Genetics","authors":[{"name":"Susan J. Robertson","is_ca":true},{"name":"Stephen E. Girardin","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07129135058335291,"gpt":0.3392046427643076,"spread":0.2679132921809547,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007875834,0.0006018796,0.001678487,0.001154657,0.00005657935,0.00001330589,0.0005002342,0.0006983757,0.0006334744],"category_scores_gemma":[0.0001314419,0.000548446,0.0003579689,0.0003217016,0.0002436474,0.0001521195,0.0002853989,0.001708278,0.001658359],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002929779,"about_ca_system_score_gemma":0.0001409294,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002273192,"about_ca_topic_score_gemma":0.00001991003,"domain_scores_codex":[0.9949076,0.001971391,0.001451622,0.0005746548,0.00005115172,0.001043571],"domain_scores_gemma":[0.9985718,0.0002692087,0.0006054057,0.0004658218,0.00004599949,0.00004172856],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007369824,0.0007044434,0.01343422,0.008078291,0.0001432224,0.00000425722,0.0003114634,7.694194e-7,0.00002162777,0.0001892619,0.00847146,0.967904],"study_design_scores_gemma":[0.001111218,0.0002907994,0.0009912157,0.008679804,0.00008297546,0.0003760517,0.00002501642,5.921324e-7,0.00000231765,0.000005872567,0.9881774,0.0002567473],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0006535812,0.9670849,0.00005060136,0.00003746306,0.03132674,0.0007303833,0.00001599875,0.00004692847,0.0000533589],"genre_scores_gemma":[0.0002752079,0.9972728,0.00002418973,0.00001746169,0.0002407642,0.0003132719,0.001685368,0.0000507675,0.0001202015],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9797059,"threshold_uncertainty_score":0.9996967,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2077520250","doi":"10.1097/mog.0000000000000117","title":"Role of programmed necrosis and cell death in intestinal inflammation","year":2014,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Necrosis; Inflammation; Programmed cell death; Medicine; Tumor necrosis factor alpha; Apoptosis; Pathology; Biology; Immunology; Genetics","authors":[{"name":"Maryse Dagenais","is_ca":false},{"name":"Todd Douglas","is_ca":false},{"name":"Maya Saleh","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02777926689423763,"gpt":0.3137747416749548,"spread":0.2859954747807171,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002521134,0.000245132,0.0006496161,0.0002344862,0.00001304989,0.000009417548,0.000137254,0.0002536548,0.000003354688],"category_scores_gemma":[0.00002962691,0.000223196,0.0001219174,0.0000795437,0.00005626517,0.000003315918,0.0001466472,0.0001970112,0.000001254378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002348449,"about_ca_system_score_gemma":0.00004221527,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001059319,"about_ca_topic_score_gemma":0.00002447379,"domain_scores_codex":[0.9984219,0.0002188429,0.0006378467,0.0003904736,0.00007424122,0.0002566689],"domain_scores_gemma":[0.9993149,0.00001549333,0.0003806917,0.0002037407,0.00003561927,0.00004955453],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000758713,0.0001461802,0.01023188,0.009351742,0.00001421056,1.90433e-7,0.0000303913,0.00001550028,0.0008676924,0.00009772315,0.00003043182,0.9791382],"study_design_scores_gemma":[0.001578294,0.001407798,0.004317601,0.007365086,0.00007728782,0.00005426694,0.00001503033,0.0004255527,0.0001723616,0.0002331779,0.9840462,0.0003073135],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01475289,0.9831842,0.0006776007,0.000008658009,0.0006544304,0.0006893644,0.00001054783,0.00000543424,0.00001684108],"genre_scores_gemma":[0.005766607,0.9926353,0.0004037393,0.000001990917,0.0002176548,0.0001419796,0.0008038461,0.00002255522,0.00000632764],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9840158,"threshold_uncertainty_score":0.9101669,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2009571147","doi":"10.1097/mog.0b013e32832914b4","title":"Cholestasis and cholestatic syndromes","year":2009,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Toronto Western Hospital; University Health Network","funders":"","keywords":"Cholestasis; Primary sclerosing cholangitis; Cholangiocyte; Primary biliary cirrhosis; Medicine; Alagille syndrome; Biliary cirrhosis; Bioinformatics; Biology; Pathology; Internal medicine; Disease; Autoimmune disease","authors":[{"name":"Gideon M. Hirschfield","is_ca":true},{"name":"E. Jenny Heathcote","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1235004395902019,"gpt":0.4157535180310192,"spread":0.2922530784408173,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001387948,0.000387336,0.001645899,0.0004257756,0.00003492189,0.00001999539,0.000155698,0.0001579733,0.00005023907],"category_scores_gemma":[0.00004480928,0.0003201347,0.0002807975,0.0001502027,0.0001380146,0.00006017757,0.0001235715,0.0007125133,0.000032591],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001111858,"about_ca_system_score_gemma":0.0001056543,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005755272,"about_ca_topic_score_gemma":5.35826e-7,"domain_scores_codex":[0.998107,0.000278457,0.0006179971,0.0004404509,0.0001360308,0.0004200885],"domain_scores_gemma":[0.9990846,0.00005140142,0.0002260768,0.0003977493,0.0000296499,0.0002105158],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004734488,0.0003924311,0.008673039,0.02644726,0.000070749,0.00000847504,0.00002747604,5.748008e-8,1.091308e-8,0.0000222626,0.001055454,0.9632555],"study_design_scores_gemma":[0.00135051,0.0008729448,0.04376683,0.034797,0.0005018996,0.0007245868,0.00001407227,0.000004579354,5.140448e-9,0.00002963958,0.9177878,0.0001500665],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001110966,0.9964928,0.00001560151,0.0001167713,0.001422948,0.0007219479,0.00006621265,0.00003087367,0.00002185062],"genre_scores_gemma":[0.0001263208,0.9988819,0.00005413418,0.00005875397,0.0001935841,0.00007512906,0.0005688454,0.00002861243,0.00001267059],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9631054,"threshold_uncertainty_score":0.9999251,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4241567176","doi":"10.1097/00001574-200003000-00014","title":"Resistant starches","year":2000,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Food composition and properties","field":"Nursing","cited_by":26,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Resistant starch; Glycemic index; Gastroenterology; Type 2 diabetes; Medicine; Internal medicine; Postprandial; Colorectal cancer; Diabetes mellitus; Insulin resistance; Ulcerative colitis; Small intestine; Carbohydrate; Chemistry; Starch; Endocrinology; Cancer; Food science; Disease; Glycemic","authors":[{"name":"David J.A. Jenkins","is_ca":true},{"name":"Cyril W.C. Kendall","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05269848369751959,"gpt":0.3155387669794467,"spread":0.2628402832819271,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001133728,0.000114466,0.0001526408,0.0001184915,0.00005158638,0.00001947045,0.000149964,0.00003788115,0.0007656243],"category_scores_gemma":[0.000007901218,0.0001068227,0.00004813384,0.00007594649,0.00009420609,0.00007523208,0.00002365532,0.0002116594,0.0001402721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005064403,"about_ca_system_score_gemma":0.000005750231,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001832907,"about_ca_topic_score_gemma":0.00002137514,"domain_scores_codex":[0.9988589,0.0002172894,0.0002626691,0.000225086,0.0001034012,0.0003326421],"domain_scores_gemma":[0.9996971,0.0000203675,0.00003353062,0.0001730734,0.00001744463,0.00005843285],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.08500761,0.001705263,0.2627811,0.0006271971,0.00004453868,0.0000056119,0.003904133,0.0006602699,0.002598557,0.0004690877,0.05334634,0.5888503],"study_design_scores_gemma":[0.003024684,0.006707187,0.1508672,0.0003901184,0.00000711298,0.00003617103,0.0001060017,0.0008161244,0.0002191446,0.000887738,0.8367268,0.0002117301],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9865092,0.001307268,0.00001717197,0.005464627,0.005707915,0.0001663915,0.00001416248,0.0000857896,0.0007274805],"genre_scores_gemma":[0.9990779,0.0001546,0.0001309694,0.0002976446,0.0002301315,0.00002645587,0.00003814552,0.00001182632,0.00003228399],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7833805,"threshold_uncertainty_score":0.8383049,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2043299344","doi":"10.1097/mog.0b013e32832c1504","title":"Evolving issues in the management of reflux disease?","year":2009,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Gastroesophageal reflux and treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"GERD; Heartburn; Medicine; Disease; Reflux; Intensive care medicine; Nerd; Esophagitis; Reflux esophagitis; Gastroenterology; Quality of life (healthcare); Internal medicine; Clinical trial; Refractory (planetary science); Proton-pump inhibitor","authors":[{"name":"Yuhong Yuan","is_ca":true},{"name":"Richard H. Hunt","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09073865119386011,"gpt":0.4313149504637322,"spread":0.3405762992698721,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003245688,0.0004316,0.001538277,0.0004908185,0.00002130154,0.00001118114,0.0003704419,0.0001100969,0.00004390452],"category_scores_gemma":[0.00001839678,0.0002804153,0.000401476,0.0002989478,0.00008605791,0.00004760914,0.0001103334,0.0005433557,0.00002987986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001714936,"about_ca_system_score_gemma":0.00005179067,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002488407,"about_ca_topic_score_gemma":8.931412e-7,"domain_scores_codex":[0.9972786,0.0003782499,0.0009724281,0.0005110175,0.0003375011,0.0005222036],"domain_scores_gemma":[0.9988506,0.00004505318,0.0003348262,0.0006272976,0.00003213767,0.0001100973],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001668012,0.002132617,0.08099024,0.05245284,0.0002738508,0.0003940593,0.00009489154,0.00000134554,8.46592e-9,0.0003115964,0.001721843,0.8614599],"study_design_scores_gemma":[0.003609982,0.001487934,0.3039224,0.08204343,0.001140728,0.0001368082,0.0000360113,0.000009922621,2.562804e-8,0.0002163873,0.6072541,0.0001423044],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004169334,0.9966246,0.00001197195,0.000147863,0.001140566,0.001486246,0.00003329642,0.00001519387,0.0001233116],"genre_scores_gemma":[0.003295235,0.9953843,0.0002317735,0.00003077207,0.0001951367,0.0002606742,0.0005362257,0.00002622144,0.00003964547],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8613176,"threshold_uncertainty_score":0.9999648,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4214947487","doi":"10.1097/mog.0000000000000824","title":"Noninvasive assessment oesophageal varices: impact of the Baveno VI criteria","year":2022,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Varices; Medicine; Cirrhosis; Portal hypertension; Esophageal varices; Endoscopy; Predictive value; Internal medicine; Gastroenterology","authors":[{"name":"Wayne Bai","is_ca":false},{"name":"Juan G. Abraldeṣ","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0986565661792066,"gpt":0.445171339665579,"spread":0.3465147734863724,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002239176,0.0003447356,0.001273243,0.0002983933,0.00005106333,0.000009652699,0.0003249648,0.0001116351,0.0009730015],"category_scores_gemma":[0.000008667591,0.0002261472,0.0008907905,0.0002398259,0.00009140842,0.0000553207,0.0001536402,0.0007143012,0.00000707894],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004175601,"about_ca_system_score_gemma":0.0006425877,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003034586,"about_ca_topic_score_gemma":0.000002279193,"domain_scores_codex":[0.9974527,0.0007293638,0.0007594256,0.0004076732,0.0003035596,0.0003472879],"domain_scores_gemma":[0.9987859,0.000126732,0.0005077393,0.0004359421,0.00004010902,0.000103634],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001640314,0.006186299,0.384749,0.237386,0.007124482,0.0001918888,0.0016738,0.00005760556,0.000003564456,0.0003402283,0.005380636,0.3552662],"study_design_scores_gemma":[0.01052332,0.008181523,0.4400011,0.06095402,0.01123116,0.002099653,0.000123034,0.0001954103,6.936858e-7,0.0001259374,0.4658602,0.0007039848],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001267728,0.9907378,0.0001052651,0.00003339265,0.00539748,0.001536935,0.0008154456,0.00001805871,0.00008790875],"genre_scores_gemma":[0.004946238,0.9924634,0.00002453586,0.00002026936,0.0002959988,0.0002741998,0.001937505,0.00003261169,0.000005210945],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.4604795,"threshold_uncertainty_score":0.9999402,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W612086590","doi":"10.1097/mog.0000000000000184","title":"Biosimilars in inflammatory bowel disease","year":2015,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Biosimilars and Bioanalytical Methods","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Biosimilar; Medicine; Infliximab; Inflammatory bowel disease; Ankylosing spondylitis; Rheumatoid arthritis; Clinical trial; Intensive care medicine; Disease; Internal medicine","authors":[{"name":"Fernando Gomollón","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1025907688596777,"gpt":0.3973268672409257,"spread":0.2947360983812479,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001033556,0.0006750345,0.001933987,0.0009106671,0.0000352709,0.00001946905,0.0006893809,0.0007995437,0.0002528497],"category_scores_gemma":[0.0001902787,0.0005560304,0.0004762845,0.0002845991,0.0004614765,0.0000710309,0.0004206616,0.001721308,0.0002308138],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002825094,"about_ca_system_score_gemma":0.0003163158,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002869384,"about_ca_topic_score_gemma":0.00001023754,"domain_scores_codex":[0.9946523,0.001968613,0.001411196,0.0009032015,0.00007617923,0.0009884509],"domain_scores_gemma":[0.9986195,0.0001615811,0.0004120078,0.0005981312,0.00005523142,0.0001535278],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006519067,0.001221387,0.04614957,0.02153139,0.0002369694,0.00003539427,0.00006176876,0.000003053642,0.00000133063,0.0003961753,0.06591196,0.8637991],"study_design_scores_gemma":[0.001254775,0.0001824749,0.001852098,0.008453109,0.0001263707,0.00003765042,0.000008367863,0.000004270857,1.309672e-7,0.0001379152,0.9876458,0.0002970058],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00003997902,0.9866636,0.00003083871,0.0002450431,0.01190155,0.0008052692,0.0002299536,0.00004380678,0.00004000417],"genre_scores_gemma":[0.00001955248,0.9987325,0.00005434303,0.00009754723,0.0002011596,0.0002350902,0.0005596756,0.00004694572,0.00005320605],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9217339,"threshold_uncertainty_score":0.9996891,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2333981415","doi":"10.1097/00001574-200207000-00006","title":"Osteoporosis and other complications of inflammatory bowel disease","year":2002,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Ankylosing spondylitis; Ulcerative colitis; Inflammatory bowel disease; Population; Venous thrombosis; Incidence (geometry); Internal medicine; Osteoporosis; Relative risk; Osteopenia; Thrombosis; Disease; Surgery; Gastroenterology; Bone mineral","authors":[{"name":"Çharles N. Bernstein","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02349479462274908,"gpt":0.2755305671557056,"spread":0.2520357725329566,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007797706,0.00012604,0.0001042484,0.00008542949,0.00002896644,0.000005527923,0.0001356328,0.00005023422,0.00005118491],"category_scores_gemma":[0.00003424284,0.0001360792,0.00005503248,0.00002781287,0.000199313,0.000004788941,0.0001089856,0.00007332565,0.00001032827],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009304288,"about_ca_system_score_gemma":0.00001230461,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001226388,"about_ca_topic_score_gemma":0.000008759814,"domain_scores_codex":[0.9990538,0.0001043369,0.0002857846,0.0002733228,0.00007203648,0.0002107713],"domain_scores_gemma":[0.9994003,0.00000647654,0.0001108932,0.0003112305,0.0000388853,0.0001322281],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001791132,0.0001689067,0.9955175,0.0001399827,0.00001134057,8.208767e-7,0.00006366555,0.00005712508,0.001121975,0.0002068251,0.002170113,0.0003626159],"study_design_scores_gemma":[0.001081022,0.00009558537,0.9874329,0.00005474527,0.000007575254,0.00000456076,0.00002273597,0.0005019907,0.00003615289,0.00005158068,0.01062712,0.00008403492],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977562,0.001008011,0.0001840466,0.0001753864,0.0004816801,0.0002153692,0.0000932634,0.000009071325,0.00007697296],"genre_scores_gemma":[0.9991642,0.000351764,0.00007261027,0.0001312767,0.0001142591,0.00007478648,0.00006382514,0.00001544966,0.00001184123],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008457012,"threshold_uncertainty_score":0.5549148,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2326433684","doi":"10.1097/mog.0000000000000260","title":"Cholangiocytes derived from induced pluripotent stem cells for disease modeling","year":2016,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Liver physiology and pathology","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto General Hospital; University Health Network","funders":"","keywords":"Cholangiocyte; Induced pluripotent stem cell; Alagille syndrome; Polycystic liver disease; Disease; Cystic fibrosis; Biology; Somatic cell; Fibrosis; Stem cell; Bioinformatics; Medicine; Pathology; Cancer research; Neuroscience; Cholestasis; Cell biology; Internal medicine; Embryonic stem cell; Liver transplantation; Transplantation; Gene; Genetics","authors":[{"name":"Anand Ghanekar","is_ca":true},{"name":"Binita M. Kamath","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1591848109362517,"gpt":0.3825206589281953,"spread":0.2233358479919436,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001580478,0.0005588137,0.002079497,0.000363122,0.00005376501,0.000008282638,0.0003093698,0.0004308475,0.00004439285],"category_scores_gemma":[0.00002580523,0.000410201,0.0006963784,0.00007139458,0.00009989478,0.00005834665,0.0001896425,0.0006333868,0.00008493716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001657152,"about_ca_system_score_gemma":0.000216478,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004646488,"about_ca_topic_score_gemma":0.00000126907,"domain_scores_codex":[0.9968825,0.0004740304,0.0009108883,0.0009320605,0.0001186873,0.0006818178],"domain_scores_gemma":[0.9984644,0.0002349094,0.0003711137,0.0005655662,0.00008018116,0.0002838],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003064786,0.0008962511,0.003572605,0.02785977,0.0006604706,0.00003133486,0.0001533537,0.0000184526,0.0001729026,0.00005952722,0.000939387,0.9625711],"study_design_scores_gemma":[0.01877536,0.003783706,0.001695283,0.1303925,0.003209167,0.0001483192,0.00008486953,0.002459134,0.00002129744,0.0009179339,0.836992,0.001520524],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01240692,0.9719962,0.003141964,0.0001151769,0.009643963,0.001903786,0.0007337235,0.00005636709,0.000001848096],"genre_scores_gemma":[0.002361825,0.9934556,0.0001219244,0.0000861253,0.001664902,0.0008292305,0.001400335,0.00006896782,0.00001106497],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9610506,"threshold_uncertainty_score":0.999835,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2091919339","doi":"10.1097/00001574-200101000-00004","title":"Emerging and reemerging intestinal protozoa","year":2001,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"National Institutes of Health; Burroughs Wellcome Fund; Howard Hughes Medical Institute","keywords":"Protozoa; Cyclospora cayetanensis; Entamoeba histolytica; Cyclospora; Protozoan infection; Amoebiasis; Population; Biology; Entamoeba; Diarrhea; Environmental health; Medicine; Immunology; Cryptosporidium; Microbiology; Pathology; Feces","authors":[{"name":"Christopher D. Huston","is_ca":false},{"name":"William A. Petri","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03771076004756447,"gpt":0.3539520704095192,"spread":0.3162413103619547,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009879623,0.0001160436,0.0001822326,0.0002096061,0.00005114974,0.00000581903,0.00003029873,0.00003092827,0.00009333047],"category_scores_gemma":[0.0000379645,0.00010322,0.00003481164,0.0001119302,0.00006946744,0.00005629258,0.0000527496,0.0002033621,0.00001468311],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005324694,"about_ca_system_score_gemma":0.00001469597,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001801835,"about_ca_topic_score_gemma":0.000006776153,"domain_scores_codex":[0.9991469,0.00004238453,0.000223307,0.0002316555,0.0000738519,0.000281912],"domain_scores_gemma":[0.9996944,0.00001386069,0.00005476925,0.0001224457,0.00003394929,0.0000805592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000237308,0.0002310956,0.9829429,0.00006317594,0.00001408182,0.00001042876,0.00007821797,0.000003883283,0.00002858347,0.00009893194,0.0002726562,0.01601875],"study_design_scores_gemma":[0.003584591,0.001076642,0.9705052,0.0004749045,0.00001962809,0.001603952,0.00007860842,0.001040377,0.000006711427,0.0001425879,0.0213976,0.00006919749],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939375,0.0004036012,0.002268769,0.0009937643,0.001433332,0.0004839267,0.000001217384,0.00004300854,0.0004348704],"genre_scores_gemma":[0.9985025,0.0005123043,0.0004949761,0.00005122225,0.0002271761,0.0001408049,0.0000247955,0.00001089327,0.00003534737],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02112495,"threshold_uncertainty_score":0.4209189,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4250714433","doi":"10.1097/mog.0b013e328365d45d","title":"Dyspepsia","year":2013,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Gastrointestinal motility and disorders","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Population Health Research Institute; McMaster University","funders":"","keywords":"Medicine; Gastroenterology; Internal medicine; Helicobacter pylori; GERD; Disease; Population; Proton-pump inhibitor; Randomized controlled trial; Reflux","authors":[{"name":"Alexander C. Ford","is_ca":false},{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1486941103212756,"gpt":0.4163386523803561,"spread":0.2676445420590806,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001668506,0.0004946834,0.001952319,0.0005254218,0.0000247201,0.00001679384,0.0002408068,0.0002251469,0.0004202979],"category_scores_gemma":[0.0001441667,0.0004116158,0.0004968898,0.0002087046,0.0001709541,0.00005768353,0.0001486969,0.001121629,0.0006608065],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001519955,"about_ca_system_score_gemma":0.0001504124,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009781941,"about_ca_topic_score_gemma":0.000003211735,"domain_scores_codex":[0.9973575,0.000256996,0.0009250776,0.0006225011,0.0001828022,0.0006550734],"domain_scores_gemma":[0.9988571,0.00007398199,0.0002928042,0.0004892661,0.00005910738,0.0002277195],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007727456,0.0006075195,0.01612525,0.04366902,0.00005445338,0.000006002298,0.00001666742,4.212133e-7,4.804985e-8,0.00008319453,0.01234396,0.9270162],"study_design_scores_gemma":[0.0009555178,0.0007406928,0.002075147,0.02636066,0.0001503579,0.0007060943,0.00001077799,0.00001097453,4.893233e-9,0.00004410882,0.9688246,0.0001211239],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00006334025,0.9939432,0.0001901773,0.0001797209,0.004052467,0.001333893,0.00002009658,0.00006045483,0.0001566105],"genre_scores_gemma":[0.0000149491,0.9982285,0.0003738228,0.00004310697,0.0004242176,0.0003113166,0.0005111673,0.00004638917,0.0000464736],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9564806,"threshold_uncertainty_score":0.9998336,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2021552786","doi":"10.1097/mog.0b013e3283457ce0","title":"Management of autoimmune hepatitis","year":2011,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Alberta Innovates - Health Solutions","keywords":"Autoimmune hepatitis; Medicine; Immunosuppression; Prednisone; Budesonide; Tacrolimus; Clinical trial; Hepatitis; Disease; Azathioprine; Autoimmune disease; Intensive care medicine; Immunology; Internal medicine; Corticosteroid; Transplantation","authors":[{"name":"Marlyn J. Mayo","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09981735616867757,"gpt":0.378796304192617,"spread":0.2789789480239394,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000136288,0.0003163138,0.001616721,0.0003433566,0.00001709158,0.000003260409,0.0002700611,0.0001329826,0.0003289618],"category_scores_gemma":[0.000006270254,0.0002700457,0.000505127,0.0001602885,0.00012369,0.00003549655,0.0002956768,0.0004475917,0.00005412308],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001049638,"about_ca_system_score_gemma":0.00006396223,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004238643,"about_ca_topic_score_gemma":5.98334e-7,"domain_scores_codex":[0.9981061,0.0002165231,0.0008819537,0.0003258722,0.0001218438,0.0003477735],"domain_scores_gemma":[0.9988554,0.00001777281,0.0004060921,0.0005852406,0.00004452115,0.00009096327],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001222369,0.000833955,0.02041894,0.09130155,0.0003576871,0.000008279695,0.00003180094,4.775686e-8,1.092381e-8,0.0005045697,0.000866843,0.8855541],"study_design_scores_gemma":[0.001033631,0.000607501,0.07343916,0.05253631,0.0006395424,0.00005698005,0.000008971588,0.000002629377,2.018995e-8,0.00001779842,0.8715564,0.0001010532],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002170677,0.9945511,0.00006267779,0.00001098104,0.004007226,0.0008647543,0.00007506483,0.0000223361,0.0001888338],"genre_scores_gemma":[0.00009666902,0.9987964,0.000130462,0.000006482194,0.0001033087,0.0001510541,0.0006326913,0.00003110323,0.00005181166],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.885453,"threshold_uncertainty_score":0.9999751,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3138067524","doi":"10.1097/mog.0000000000000733","title":"Advances in cirrhotic cardiomyopathy","year":2021,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Cardiomyopathy; Medicine; Cardiology; Internal medicine; Heart failure","authors":[{"name":"Hongqun Liu","is_ca":true},{"name":"Ki Tae Yoon","is_ca":false},{"name":"Jing Zhang","is_ca":false},{"name":"Samuel S. Lee","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06645353821897111,"gpt":0.3996285241651335,"spread":0.3331749859461624,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001347186,0.0002946319,0.001592937,0.0005182309,0.00001191281,0.000007904501,0.0001074928,0.0001432388,0.00004772409],"category_scores_gemma":[0.00001006457,0.0002680522,0.0003616369,0.0002605391,0.00004969332,0.00008743632,0.00003853659,0.0005319839,0.00003219894],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001439459,"about_ca_system_score_gemma":0.0001853737,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003311233,"about_ca_topic_score_gemma":0.000008596962,"domain_scores_codex":[0.9979864,0.000350587,0.0006497693,0.0004896754,0.0001549535,0.0003686667],"domain_scores_gemma":[0.9994026,0.00005563122,0.0001503678,0.0002561817,0.00003245077,0.0001027301],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001435654,0.0004199503,0.07527601,0.08712288,0.0001240018,0.0001462658,0.0001022189,0.000005264489,3.279665e-8,0.0000886058,0.000127759,0.8364434],"study_design_scores_gemma":[0.002240553,0.0002913192,0.005652604,0.08199994,0.000833949,0.0004108888,0.00002696084,0.000007678892,3.924126e-8,0.00002103034,0.9083436,0.0001714895],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001269922,0.9944829,0.0001078687,0.00002452151,0.004498874,0.0006194477,0.00005454852,0.00001817007,0.0000666729],"genre_scores_gemma":[0.0003089807,0.9971028,0.00002119965,0.00001728556,0.0003829996,0.0002085637,0.001929976,0.00002546653,0.000002733601],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9082158,"threshold_uncertainty_score":0.9999772,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1996991606","doi":"10.1097/mog.0b013e3283025c57","title":"The nonerosive reflux disease???gastroesophageal reflux disease controversy","year":2008,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Gastroesophageal reflux and treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Reflux; Disease; Medicine; Gastroenterology; Internal medicine","authors":[{"name":"Jack Winter","is_ca":false},{"name":"R C Heading","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07559753419015468,"gpt":0.3999857085373328,"spread":0.3243881743471781,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0002572552,0.001389322,0.003010965,0.0005585958,0.000394968,0.00007420568,0.0007550741,0.0002958401,0.00007197321],"category_scores_gemma":[0.0003794239,0.0009310744,0.001643432,0.0003745346,0.0007443568,0.0001540172,0.0004239889,0.001740933,0.0003808937],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008264292,"about_ca_system_score_gemma":0.0008521086,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003619213,"about_ca_topic_score_gemma":0.000002443537,"domain_scores_codex":[0.993041,0.000871749,0.001841971,0.001552524,0.0008242729,0.001868481],"domain_scores_gemma":[0.9953818,0.0003754759,0.0009288369,0.001599668,0.0001879511,0.001526259],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.005409552,0.0043745,0.2005488,0.02426082,0.001837922,0.004097343,0.00009396945,0.00001162071,1.533907e-7,0.0005175863,0.04531198,0.7135357],"study_design_scores_gemma":[0.006293986,0.001403644,0.04929495,0.01087868,0.001209234,0.000454579,0.000007126428,0.00002350017,4.464561e-8,0.0000531917,0.9301164,0.0002646346],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0003473206,0.9873149,0.00005853285,0.0002989279,0.007967144,0.003143537,0.0006975142,0.0001198031,0.00005228777],"genre_scores_gemma":[0.003244937,0.989848,0.00005787325,0.0001282375,0.001668208,0.001425995,0.003111998,0.0001682181,0.0003465281],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8848044,"threshold_uncertainty_score":0.9998857,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2395764303","doi":"10.1097/mog.0000000000000285","title":"Fecal transplantation","year":2016,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Ulcerative colitis; Randomized controlled trial; Inflammatory bowel disease; Internal medicine; Clostridium difficile; Crohn's disease; Disease; Placebo; Intensive care medicine; Antibiotics; Alternative medicine; Pathology","authors":[{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1135398284350907,"gpt":0.4283122030108917,"spread":0.314772374575801,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002404933,0.0004396396,0.001629108,0.0007327492,0.00003308799,0.00001461217,0.0002278347,0.0003338923,0.0003296189],"category_scores_gemma":[0.00005358528,0.0003164807,0.0005330858,0.0002430982,0.0001339537,0.00004287398,0.00007931419,0.0009040257,0.000442891],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003477739,"about_ca_system_score_gemma":0.0002930591,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003555275,"about_ca_topic_score_gemma":0.000002550524,"domain_scores_codex":[0.9971046,0.0003034878,0.0008883672,0.0006505662,0.0003304894,0.000722439],"domain_scores_gemma":[0.9989812,0.0001353073,0.0001928538,0.0004103966,0.00006017432,0.0002200528],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003369039,0.000319935,0.0006560472,0.03481655,0.00006630597,0.00002648069,0.0000169756,7.630563e-8,0.000002224084,0.00004346486,0.00266346,0.9610516],"study_design_scores_gemma":[0.001850037,0.0005740172,0.0001763915,0.03770944,0.000155431,0.0006559,0.000002818671,0.000002710552,0.000002046198,0.000005804804,0.9587155,0.0001499074],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002557561,0.9943227,0.0001308169,0.0002024479,0.0037326,0.001008704,0.0001756979,0.00004705932,0.0001241898],"genre_scores_gemma":[0.00005385733,0.9974254,0.00001627502,0.00001149431,0.001241982,0.0002546274,0.0008795658,0.00005552534,0.00006123182],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9609017,"threshold_uncertainty_score":0.9999287,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2047605880","doi":"10.1097/00001574-200411000-00013","title":"T-cell–induced mucosal damage in the intestine","year":2004,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Celiac Disease Research and Management","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Chemistry; Cell biology; Biology","authors":[{"name":"Kenneth Croitoru","is_ca":true},{"name":"Pengfei Zhou","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05926486891186641,"gpt":0.3689961598503281,"spread":0.3097312909384617,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003685994,0.0001358262,0.0002004559,0.0002975042,0.00002352484,0.0000142646,0.0002056304,0.00003307132,0.00005430677],"category_scores_gemma":[0.00009762999,0.0001006013,0.00006752023,0.0002226839,0.00007318545,0.0000501656,0.0001278567,0.0004413256,0.00005271454],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001177405,"about_ca_system_score_gemma":0.00006816221,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004732289,"about_ca_topic_score_gemma":0.00006011248,"domain_scores_codex":[0.9985585,0.0001376899,0.0002870512,0.000273236,0.0002483668,0.0004951472],"domain_scores_gemma":[0.9994625,0.00003268662,0.00004575149,0.0003056513,0.00002994314,0.0001234426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0023173,0.006354766,0.9528174,0.001086935,0.00003072728,0.0002481523,0.0007904808,0.0001722312,0.001162051,0.002553774,0.0256647,0.006801519],"study_design_scores_gemma":[0.0125056,0.001984996,0.9725496,0.0004407786,0.00001592708,0.00007864287,0.0004073982,0.0002153101,0.00004098297,0.0006436935,0.01101842,0.00009862088],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9876246,0.0004548475,0.0004185535,0.0092219,0.001039157,0.0007082016,0.000005061311,0.00002402496,0.0005036239],"genre_scores_gemma":[0.9987943,0.0003362009,0.00008326885,0.0003302274,0.0002069756,0.0001289175,0.0001006309,0.0000106913,0.000008758827],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01973226,"threshold_uncertainty_score":0.4102402,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994006402","doi":"10.1097/00001574-200309000-00008","title":"Diagnosis of portal hypertensive gastropathy","year":2003,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Portal hypertensive gastropathy; Portal hypertension; Medicine; Gastroenterology; Internal medicine; Epidemiology; Portal venous pressure; Pathogenesis; Cirrhosis; Esophageal varices","authors":[{"name":"Kelly W. Burak","is_ca":true},{"name":"Paul L. Beck","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03327826803813847,"gpt":0.3023155172932751,"spread":0.2690372492551366,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007122868,0.000102196,0.000257213,0.0001542244,0.00001174584,0.000001802146,0.00003871839,0.00003533427,0.0001253674],"category_scores_gemma":[0.00001746713,0.00009512655,0.00008216102,0.00007738807,0.00006677213,0.0000475265,0.00000781681,0.0001196639,0.00001103525],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001608006,"about_ca_system_score_gemma":0.00003590693,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005153609,"about_ca_topic_score_gemma":0.000002440071,"domain_scores_codex":[0.9991065,0.00008693584,0.0002829006,0.0001888249,0.000116745,0.0002180576],"domain_scores_gemma":[0.9996067,0.00002534544,0.00007901136,0.0001293757,0.00007083642,0.00008868716],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003755071,0.0003928997,0.9976483,0.0002220556,0.00004239622,0.00001295142,0.0001245469,0.00000669689,0.00009582815,0.0003362682,0.0003857987,0.0003567718],"study_design_scores_gemma":[0.003584438,0.0007491126,0.9936747,0.0003408654,0.0001124888,0.000185699,0.0001349216,0.00002283329,0.0005054572,0.00008386277,0.0005541165,0.00005151631],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967764,0.0008172705,0.0003214067,0.0001355034,0.001578264,0.000217877,0.0000300738,0.0000125018,0.0001107251],"genre_scores_gemma":[0.9983503,0.001189333,0.0001406633,0.00007122697,0.00007022041,0.00004811882,0.0001196446,0.000008552997,0.000001898216],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003973591,"threshold_uncertainty_score":0.3879148,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4251337807","doi":"10.1097/mog.0b013e328358ad9b","title":"Dyspepsia","year":2012,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Epigastric pain; Medicine; Helicobacter pylori; Gastroenterology; Microbiome; Internal medicine; Clinical trial; Intensive care medicine; Bioinformatics","authors":[{"name":"Paul Moayyedi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1332625079110818,"gpt":0.3993434113160882,"spread":0.2660809034050064,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004502582,0.0009797255,0.003810208,0.001127052,0.00006043207,0.000014601,0.0004014926,0.0006702715,0.0001904518],"category_scores_gemma":[0.00009297671,0.0008288537,0.0006988493,0.0004456411,0.0003556832,0.0001112287,0.0004543131,0.002419435,0.0007791015],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004743036,"about_ca_system_score_gemma":0.0001518083,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003846541,"about_ca_topic_score_gemma":0.000006142129,"domain_scores_codex":[0.9948,0.000630177,0.00168882,0.0009492731,0.0002912471,0.001640468],"domain_scores_gemma":[0.9979298,0.000104276,0.0006113662,0.0008395608,0.0001112308,0.0004037395],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002599301,0.001004145,0.1323702,0.02804886,0.0008121717,0.00001969186,0.0001115889,2.069158e-7,1.119833e-7,0.00004742129,0.007198119,0.8301276],"study_design_scores_gemma":[0.00167337,0.0007707424,0.007601976,0.0154558,0.001076024,0.001148049,0.00000908409,0.000001643232,1.822026e-8,0.000004723365,0.9720294,0.0002291368],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001398443,0.9814344,0.00007388401,0.0003007072,0.01632681,0.001415455,0.00007123952,0.0001308053,0.0001068723],"genre_scores_gemma":[0.00006067561,0.9961081,0.000146877,0.0001107143,0.002005255,0.0005246421,0.0008678896,0.0001262462,0.00004964876],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9648313,"threshold_uncertainty_score":0.9999989,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2013735444","doi":"10.1097/mog.0000000000000133","title":"An update on travelers’ diarrhea","year":2014,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Travel-related health issues","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Alberta Innovates - Health Solutions","keywords":"Traveler's diarrhea; Diarrhea; Medicine; Intensive care medicine; Disease; Vaccination; Exacerbation; Epidemiology; Pediatrics; Immunology; Internal medicine","authors":[{"name":"Deenaz Zaidi","is_ca":true},{"name":"Eytan Wine","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1088888063687418,"gpt":0.4496441138519185,"spread":0.3407553074831767,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0005847333,0.0007440716,0.003166959,0.0009872915,0.00005293327,0.00001692196,0.0004183652,0.0006817122,0.0001881275],"category_scores_gemma":[0.00006849556,0.0006307779,0.0004172362,0.0002446026,0.0001621001,0.00005503981,0.00006096243,0.002303626,0.000696871],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003243038,"about_ca_system_score_gemma":0.0002180462,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008450964,"about_ca_topic_score_gemma":0.000006773214,"domain_scores_codex":[0.9950585,0.0009458615,0.001561601,0.001049612,0.0003205219,0.001063945],"domain_scores_gemma":[0.9977376,0.0001153584,0.0005646368,0.0009858722,0.00005825786,0.0005382694],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003718667,0.0009125653,0.002483003,0.0431099,0.0001036761,0.00001252361,0.0001126366,0.000003324291,9.827727e-8,0.0003877727,0.006255664,0.946247],"study_design_scores_gemma":[0.00179526,0.002812633,0.002133119,0.03462558,0.0001951908,0.0001835279,0.000004714288,0.00003711776,7.598766e-8,0.00002263911,0.957969,0.0002211741],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002991141,0.9859244,0.0002017269,0.0004896746,0.01114783,0.001671083,0.00007752143,0.0001332158,0.00005547742],"genre_scores_gemma":[0.0002778384,0.9953032,0.000148356,0.0003042975,0.001691045,0.000265796,0.001869383,0.0001262357,0.00001383151],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9517133,"threshold_uncertainty_score":0.9999981,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2068291758","doi":"10.1097/00001574-200103000-00011","title":"Selenium: recent clinical advances","year":2001,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Selenium in Biological Systems","field":"Nursing","cited_by":14,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"National Institutes of Health","keywords":"Selenium; Selenium deficiency; Trace element; Biology; Environmental health; Medicine; Chemistry; Endocrinology; Oxidative stress","authors":[{"name":"Raymond F. Burk","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1034068134355843,"gpt":0.4100792938500271,"spread":0.3066724804144428,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007353351,0.00024701,0.0005032621,0.0001468332,0.00005827759,0.00001900386,0.0003906369,0.000198973,0.0002297716],"category_scores_gemma":[0.0002534935,0.0002113286,0.000132751,0.0002527424,0.0002149399,0.0001373802,0.000112064,0.0006121737,0.0001944082],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001242078,"about_ca_system_score_gemma":0.000009362095,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008197466,"about_ca_topic_score_gemma":0.00002316474,"domain_scores_codex":[0.9964444,0.0009023123,0.001042027,0.0006545343,0.0001933944,0.0007633406],"domain_scores_gemma":[0.9989312,0.0002175049,0.0002641852,0.000340468,0.00007973463,0.0001668682],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001396645,0.0004270222,0.9439883,0.00004615525,0.000006804521,7.230579e-7,0.00003367591,0.00001978467,0.00008717803,0.00004458418,0.007261513,0.04668762],"study_design_scores_gemma":[0.001694967,0.00106229,0.3585661,0.0001153979,0.000004854573,0.00007415708,0.00003793698,0.0001396777,0.00001527861,0.0002913653,0.6378727,0.0001252702],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9096795,0.007078981,0.0006892988,0.004252884,0.07716671,0.0005857943,0.000009871802,0.0002021072,0.0003348597],"genre_scores_gemma":[0.9853542,0.01132734,0.0002803967,0.000421168,0.002427979,0.00008671544,0.00007089535,0.00002323418,0.000008002243],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6306112,"threshold_uncertainty_score":0.8617728,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2980013440","doi":"10.1097/mog.0000000000000594","title":"Pouchitis","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"NOSM University; Thunder Bay Regional Health Sciences Centre","funders":"","keywords":"Pouchitis; Ulcerative colitis; Medicine; Pouch; Internal medicine; Gastroenterology; Vedolizumab; Colectomy; Crohn's disease; Disease; Surgery","authors":[{"name":"Hyder Shah","is_ca":false},{"name":"Petros Zezos","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05809840472779005,"gpt":0.3636800753981543,"spread":0.3055816706703643,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001698347,0.0004532882,0.0008682664,0.0002291905,0.00002279267,0.00001637178,0.0004869061,0.0003563273,0.00006220923],"category_scores_gemma":[0.00004485925,0.0004431586,0.0004766845,0.00006750743,0.00008997169,0.000003003355,0.0003354672,0.0003972272,0.0002985368],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005487024,"about_ca_system_score_gemma":0.0002061524,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":8.634038e-7,"about_ca_topic_score_gemma":0.000006484511,"domain_scores_codex":[0.9975213,0.0004422341,0.0006454198,0.0007304167,0.0001173832,0.0005432857],"domain_scores_gemma":[0.9988544,0.00001185403,0.0003019072,0.0006802599,0.00003462407,0.0001169289],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003214653,0.0004087347,0.01856351,0.04906229,0.0002349443,0.00002743003,0.00001612458,0.00001501982,0.000002579834,0.0001689719,0.03814707,0.8930318],"study_design_scores_gemma":[0.0005892246,0.0001651668,0.001422379,0.003430726,0.0000630107,0.00006319277,0.000001868289,0.000002523955,7.439509e-8,0.000005914227,0.9940386,0.000217331],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002712961,0.9898298,0.00008689618,0.000009557922,0.008793702,0.0007399058,0.0001687793,0.00001448442,0.00008552509],"genre_scores_gemma":[0.00003151112,0.9962046,0.000028219,0.00003080393,0.00106841,0.0002167429,0.002293312,0.00006552124,0.00006086029],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9558915,"threshold_uncertainty_score":0.999802,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}