{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":14,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":14,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"5a4ec0f117a2","filters":{"venue":"Current Opinion in Systems Biology"}},"results":[{"id":"W2607420905","doi":"10.1016/j.coisb.2017.03.005","title":"Mechanisms of cell polarization","year":2017,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":147,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Multicellular organism; Cell polarity; Polarization (electrochemistry); Biology; Cell biology; Cell; Chemistry; Genetics","authors":[{"name":"Wouter‐Jan Rappel","is_ca":false},{"name":"Leah Edelstein‐Keshet","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03866303230457459,"gpt":0.3327301418359373,"spread":0.2940671095313627,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001781078,0.00009020218,0.0001405899,0.00006190683,0.00007902385,0.00001951329,0.0002402528,0.0001367802,0.0000102518],"category_scores_gemma":[0.00005924288,0.00008623586,0.0000554809,0.00002483628,0.00003464199,0.000004694351,0.0001178049,0.00007240526,0.000008604758],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000997277,"about_ca_system_score_gemma":0.00003342315,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007921342,"about_ca_topic_score_gemma":0.000004986832,"domain_scores_codex":[0.9992705,0.0000679144,0.0002625196,0.0002230631,0.00004327051,0.0001327246],"domain_scores_gemma":[0.9991797,0.000005593957,0.0002764305,0.0004363953,0.00007068863,0.00003123469],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001355654,0.00007053539,0.003109234,0.00007963012,0.000007037914,4.390029e-8,0.00001089558,0.000006330721,0.9739136,0.02173517,0.0002794837,0.0007745077],"study_design_scores_gemma":[0.002349236,0.00102418,0.01111932,0.0004330556,0.0000167019,0.00002217147,0.0002501995,0.002626786,0.5974734,0.003360273,0.3806565,0.0006681152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5561368,0.01263772,0.355922,0.0001948764,0.06928851,0.001283628,0.0002846541,0.0000285825,0.004223213],"genre_scores_gemma":[0.9988177,0.0004574428,0.00007245393,0.000003026501,0.0002110373,0.00002185692,0.0002757406,0.000009196713,0.000131496],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4426809,"threshold_uncertainty_score":0.3516596,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2888041009","doi":"10.1016/j.coisb.2018.08.009","title":"Progress and trends in mathematical modelling of influenza A virus infections","year":2018,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto Metropolitan University","funders":"National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science","keywords":"Virus; Influenza A virus; Virology; Biology; Computational biology","authors":[{"name":"Andreas Handel","is_ca":false},{"name":"Laura E. Liao","is_ca":false},{"name":"Catherine A. A. Beauchemin","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.3052781695463341,"gpt":0.4894087490681362,"spread":0.1841305795218021,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004767932,0.0001251376,0.0004552764,0.0007057673,0.00003918414,0.000007112197,0.00005793803,0.0001197654,0.00001690407],"category_scores_gemma":[0.0001223913,0.00009726217,0.00003574556,0.0004733349,0.000563702,0.00004459969,0.0000962968,0.0002185435,0.00001407724],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000675572,"about_ca_system_score_gemma":0.00003646159,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001259338,"about_ca_topic_score_gemma":0.00001148203,"domain_scores_codex":[0.9986366,0.0001507022,0.0005727044,0.0002385859,0.0001157395,0.0002856416],"domain_scores_gemma":[0.9994093,0.0001069464,0.0001008412,0.0001801825,0.0001393914,0.00006332226],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004013465,0.00105666,0.9340573,0.003351599,0.000101266,0.000001600371,0.003816927,0.0001367283,0.0005701862,0.02215499,0.000411877,0.0339395],"study_design_scores_gemma":[0.02917014,0.01114679,0.4076469,0.02604801,0.0001262421,0.0003877684,0.002787025,0.2618452,0.001052129,0.007837787,0.2500027,0.001949378],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9724039,0.02271161,0.001531084,0.00008916879,0.00161569,0.0007560035,0.00003445129,0.0000416816,0.00081641],"genre_scores_gemma":[0.9988564,0.0005443022,0.0001103198,0.000005837965,0.0002788733,0.0001756805,0.000009688823,0.00000954189,0.000009375418],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5264105,"threshold_uncertainty_score":0.3966236,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2984849752","doi":"10.1016/j.coisb.2019.10.008","title":"Modeling cell–cell communication for immune systems across space and time","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Systems Biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Canadian Institute for Advanced Research","funders":"H2020 European Research Council; European Research Council; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Canadian Institute for Advanced Research; European Molecular Biology Organization","keywords":"Juxtacrine signalling; Paracrine signalling; Computer science; Population; Autocrine signalling; Biology; Medicine","authors":[{"name":"Hirad Daneshpour","is_ca":false},{"name":"Hyun Youk","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1061220367618402,"gpt":0.3816844789256976,"spread":0.2755624421638574,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001092739,0.0005879818,0.002224372,0.0003230639,0.0002169677,0.00007750462,0.0004799573,0.001298057,0.00003054316],"category_scores_gemma":[0.00005550656,0.0005038192,0.0003565788,0.0001777913,0.0001221018,0.0001230838,0.0002668572,0.0009471691,0.001352334],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002369575,"about_ca_system_score_gemma":0.0001304489,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000291325,"about_ca_topic_score_gemma":9.73008e-7,"domain_scores_codex":[0.995589,0.00144315,0.001603205,0.0007376657,0.000033597,0.0005934519],"domain_scores_gemma":[0.997511,0.0005099601,0.0009402163,0.0008422933,0.0001680236,0.00002846496],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008165519,0.00181991,0.0001502323,0.490457,0.001453285,5.220196e-7,0.002949657,0.001599152,0.004080339,0.01725455,0.05863097,0.4207878],"study_design_scores_gemma":[0.00112311,0.0001653917,4.590342e-7,0.01216094,0.00009807583,0.00006041045,0.0003372043,0.002024572,0.000005106712,0.000004568859,0.9835476,0.0004725924],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000040519,0.9430037,0.001182199,0.00000849328,0.05222367,0.002993471,0.0001660655,0.00007228454,0.0003096502],"genre_scores_gemma":[0.001714064,0.9848674,0.000006806345,0.000001984776,0.0002142177,0.0006913332,0.006719884,0.0000689956,0.00571531],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9249166,"threshold_uncertainty_score":0.9999985,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2742732223","doi":"10.1016/j.coisb.2017.08.002","title":"Mapping a diversity of genetic interactions in yeast","year":2017,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Human Genome Research Institute; University of Toronto","keywords":"Biology; Genetics; Genetic diversity; Allele; Phenotype; Evolutionary biology; Yeast; Computational biology; Genome; Model organism; Function (biology); Gene; Population; Medicine","authors":[{"name":"Jolanda van Leeuwen","is_ca":true},{"name":"Charles Boone","is_ca":true},{"name":"Brenda Andrews","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1086406165941395,"gpt":0.3864713176486465,"spread":0.2778307010545069,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000194036,0.00008910381,0.0001641716,0.000138645,0.00009725463,0.00001435865,0.000376739,0.00007647977,0.00000722418],"category_scores_gemma":[0.00009421012,0.000085822,0.00004668161,0.00005611728,0.0001259086,0.000003430511,0.0006821227,0.0001225443,0.00000976879],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002086458,"about_ca_system_score_gemma":0.00004390294,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004367655,"about_ca_topic_score_gemma":0.00009198922,"domain_scores_codex":[0.9990929,0.000119028,0.0002627304,0.0002580005,0.00006537789,0.0002019732],"domain_scores_gemma":[0.9993703,0.00001007817,0.000139428,0.000375331,0.00006158679,0.00004328357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003746736,0.00008727583,0.9010893,0.0001634694,0.00001192551,4.298112e-7,0.0001281318,0.0000609476,0.09345476,0.0001148061,0.0002924206,0.004559098],"study_design_scores_gemma":[0.0009997473,0.0001414258,0.944665,0.0003760876,0.000001520183,0.00001153361,0.0002660208,0.0005648055,0.002260292,0.00008484321,0.05043138,0.0001973289],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914428,0.003539379,0.00047685,0.00004398844,0.003750832,0.0002234825,0.00004736138,0.00000256704,0.0004727641],"genre_scores_gemma":[0.9987301,0.0008240782,0.0000322157,0.000001477739,0.0002797548,0.00002479569,0.00004371781,0.000005387117,0.00005851551],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09119447,"threshold_uncertainty_score":0.349972,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4388087833","doi":"10.1016/j.coisb.2023.100482","title":"Microbial production of fuels, commodity chemicals, and materials from sustainable sources of carbon and energy","year":2023,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; National Center for Complementary and Integrative Health; Biological and Environmental Research; Philomathia Foundation; U.S. Department of Energy; Office of Science; National Institutes of Health; National Science Foundation","keywords":"Bioproduction; Commodity chemicals; Biomass (ecology); Biochemical engineering; Fossil fuel; Environmental science; Carbon fibers; Renewable energy; Carbon sequestration; Greenhouse gas; Biofuel; Waste management; Biotechnology; Chemistry; Carbon dioxide; Ecology; Engineering; Biology; Materials science","authors":[{"name":"Aidan E. Cowan","is_ca":false},{"name":"Sarah H. Klass","is_ca":false},{"name":"Peter H. Winegar","is_ca":false},{"name":"Jay D. Keasling","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01634012312501289,"gpt":0.257371646545096,"spread":0.2410315234200832,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002604153,0.0000988227,0.0002449481,0.00008670935,0.00001581661,0.000005006184,0.00005589989,0.0001360293,5.942042e-7],"category_scores_gemma":[0.0000725094,0.00009026315,0.00001607219,0.0001093485,0.000106687,0.000002601447,0.00009652427,0.00003748851,1.120778e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006176161,"about_ca_system_score_gemma":0.00001421181,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008811537,"about_ca_topic_score_gemma":0.000003684363,"domain_scores_codex":[0.9991676,0.00009867106,0.0002903316,0.0002739162,0.00002906143,0.0001404756],"domain_scores_gemma":[0.9996341,0.000005932581,0.0001301972,0.0001484977,0.00005938846,0.00002181169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004081595,0.00002303298,0.002899955,0.000502093,0.0000148785,3.987842e-8,0.00005653758,0.0000109468,0.9949087,0.0002196295,0.0003820963,0.0009412931],"study_design_scores_gemma":[0.0003061516,0.00007937768,0.004173529,0.0001262318,0.000006957357,0.000008398506,0.0001580569,0.00001076341,0.9524502,0.00004864444,0.04251265,0.0001190962],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9864311,0.01004209,0.00003547506,0.00003196647,0.003280195,0.00009963084,0.00006631474,0.00001020766,0.000003063877],"genre_scores_gemma":[0.9954405,0.003330643,0.00001300609,6.391353e-7,0.0007229777,0.00001498246,0.0004127999,0.000007409428,0.00005707266],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04245854,"threshold_uncertainty_score":0.3680824,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2775595841","doi":"10.1016/j.coisb.2017.11.010","title":"The paths of mortality: How understanding the biology of aging can help explain systems behavior of single cells","year":2017,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute on Aging; National Institutes of Health; AGE-WELL","keywords":"Biology; Proteostasis; Longevity; Neuroscience; Population; Evolutionary biology; Cell biology; Genetics; Medicine","authors":[{"name":"Matthew M. Crane","is_ca":false},{"name":"Matt Kaeberlein","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.117526824663673,"gpt":0.3368647737843776,"spread":0.2193379491207046,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000993679,0.0002085108,0.0004550893,0.00007131746,0.0002202561,0.00004186993,0.0007721159,0.0002346529,8.391041e-7],"category_scores_gemma":[0.0001182696,0.0001400974,0.0001227071,0.00005610835,0.0008127623,0.000004940827,0.0002699684,0.000136282,3.582722e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000434643,"about_ca_system_score_gemma":0.0000863142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005775451,"about_ca_topic_score_gemma":0.0001138203,"domain_scores_codex":[0.9980367,0.0004920912,0.0006610497,0.0003523702,0.0001207605,0.0003369916],"domain_scores_gemma":[0.9976344,0.00009620986,0.001054366,0.001022841,0.0001454677,0.0000467513],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001952105,0.000149073,0.2343497,0.0006608131,0.0001090447,2.912056e-7,0.000828424,0.0001739011,0.7553712,0.007285398,0.0002525913,0.0008000243],"study_design_scores_gemma":[0.005858328,0.004279415,0.05198723,0.003321087,0.0004097814,0.00009166158,0.03555496,0.001821014,0.8352072,0.002001056,0.05715194,0.00231637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.960009,0.0185607,0.008284171,0.0001716236,0.01187071,0.0008006743,0.0002459841,0.00000675316,0.00005035106],"genre_scores_gemma":[0.9973646,0.002101139,0.00001106098,0.000002332117,0.0003446971,0.00005910994,0.00007799194,0.0000184788,0.00002061835],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1823625,"threshold_uncertainty_score":0.5713006,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3166328131","doi":"10.1016/j.coisb.2021.06.002","title":"Reconstructing developmental landscapes and trajectories from single-cell data","year":2021,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Burroughs Wellcome Fund","keywords":"Data science; Computer science","authors":[{"name":"Geoffrey Schiebinger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0894918109711234,"gpt":0.2984143398012069,"spread":0.2089225288300835,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001372764,0.0001502004,0.0002162253,0.00003579069,0.00005533376,0.00003889031,0.0001868735,0.000166267,0.000009531405],"category_scores_gemma":[0.00007045321,0.0001461879,0.0000238128,0.00007153546,0.00006156613,0.000007388761,0.0001872467,0.0001086846,0.000003005734],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001595286,"about_ca_system_score_gemma":0.0001041932,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001015304,"about_ca_topic_score_gemma":0.00006761496,"domain_scores_codex":[0.9987331,0.0001463439,0.0003259583,0.0005482601,0.00004640621,0.0001999207],"domain_scores_gemma":[0.9995191,0.00004493677,0.00008119409,0.0002601543,0.00004233023,0.00005226771],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004143643,0.0001093196,0.4389344,0.0001508486,0.00003172598,0.000001035638,0.0001610732,0.000003006774,0.546684,0.00005447633,0.000538642,0.01329001],"study_design_scores_gemma":[0.005633242,0.0003751978,0.01210208,0.0008626638,0.00003604876,0.0002854931,0.004290524,0.001370558,0.1190524,0.0001753018,0.8543367,0.001479716],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9587705,0.03198876,0.001112927,0.00002476632,0.007468411,0.0001117897,0.0003084311,0.0000134423,0.0002009659],"genre_scores_gemma":[0.9928471,0.001724717,0.001008437,0.000008868476,0.0008029412,0.000009994503,0.003564453,0.00001408891,0.00001939027],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8537981,"threshold_uncertainty_score":0.596137,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3089368604","doi":"10.1016/j.coisb.2020.09.008","title":"Designer endosymbionts: Converting free-living bacteria into organelles","year":2020,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Western University","keywords":"Endosymbiosis; Organelle; Biology; Eukaryotic cell; Evolutionary biology; Computational biology; Chloroplast; Cell biology; Plastid; Genetics; Cell; Gene","authors":[{"name":"Rebecca S. Meaney","is_ca":true},{"name":"Samir Hamadache","is_ca":true},{"name":"Maximillian P. M. Soltysiak","is_ca":true},{"name":"Bogumil J. Karas","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04819158812487918,"gpt":0.2956052896730261,"spread":0.2474137015481469,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002048372,0.0002011253,0.0002794641,0.00004174835,0.00007373973,0.00002205998,0.0003136774,0.0001537735,0.0000142267],"category_scores_gemma":[0.0003198534,0.0001848652,0.00006229897,0.00009940966,0.0000824841,0.000001335497,0.0003670387,0.00009865862,0.00002088699],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001844074,"about_ca_system_score_gemma":0.00005301058,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005984159,"about_ca_topic_score_gemma":0.000006541229,"domain_scores_codex":[0.9985408,0.0002143382,0.0004282724,0.0004761267,0.0000527636,0.0002876908],"domain_scores_gemma":[0.9993815,0.0000465442,0.0001431589,0.0002625048,0.00007276778,0.00009356719],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003557331,0.00003753257,0.1015614,0.0002233551,0.00005077568,2.653903e-7,0.0007313669,0.00002381029,0.8915645,0.0004218564,0.002583922,0.002765576],"study_design_scores_gemma":[0.0034212,0.001454544,0.05615805,0.0007273972,0.00003302052,0.00003622623,0.002697036,0.0008705756,0.03987179,0.0003842814,0.8926266,0.001719314],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9566909,0.0334615,0.001901414,0.0003450358,0.006995216,0.0004254576,0.00004970069,0.00001501676,0.0001157424],"genre_scores_gemma":[0.9966984,0.001660235,0.0001586726,0.00006016115,0.0012604,0.00005240186,0.00007982718,0.00002104706,0.000008905564],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8900427,"threshold_uncertainty_score":0.7538583,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3088656535","doi":"10.1016/j.coisb.2020.09.003","title":"Budding yeast as a factory to engineer partial and complete microbial genomes","year":2020,"lang":"en","type":"review","venue":"Current Opinion in Systems Biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Agence Nationale de la Recherche; International Development Research Centre","keywords":"Genome; Biology; Yeast; Synthetic biology; Bacterial genome size; Computational biology; Saccharomyces cerevisiae; Budding yeast; Genome engineering; Genetics; Genome editing; Gene","authors":[{"name":"Sanjay Vashee","is_ca":false},{"name":"Yonathan Arfi","is_ca":false},{"name":"Carole Lartigue","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06877207657369261,"gpt":0.4077412738239887,"spread":0.3389691972502961,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001291038,0.0003877645,0.000932974,0.0001534986,0.00002951285,0.00002885201,0.0002240254,0.0003417295,0.000006155752],"category_scores_gemma":[0.00005121781,0.0003572673,0.0001561422,0.0001253547,0.00003957987,0.000001495513,0.0002519873,0.0002318397,0.00004742438],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003668922,"about_ca_system_score_gemma":0.0001021668,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001676326,"about_ca_topic_score_gemma":0.000001292269,"domain_scores_codex":[0.9982885,0.0001436117,0.0005424505,0.0006327173,0.00005426486,0.0003385211],"domain_scores_gemma":[0.9994282,0.00001878434,0.000114068,0.0002470016,0.0000253099,0.0001666154],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000292512,0.0000506297,0.0001423143,0.02311144,0.0002614612,0.000003128763,0.0002421062,0.0001372051,0.007025602,0.0003293067,0.002743258,0.9659243],"study_design_scores_gemma":[0.0001760272,0.0001248855,0.00001114182,0.002133067,0.00002603359,0.00005940612,0.00001738128,0.00002580955,0.00001875868,6.886465e-7,0.9970394,0.0003674006],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001457986,0.989015,0.00320431,0.00001204479,0.006565752,0.0007173285,0.0003026298,0.00001788398,0.00001929559],"genre_scores_gemma":[0.002705297,0.9940188,0.0000514198,0.000007401033,0.002208818,0.0001618505,0.0007820851,0.00004637214,0.00001797808],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9942961,"threshold_uncertainty_score":0.9998879,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3092435225","doi":"10.1016/j.coisb.2020.10.001","title":"The adaptive immune receptor repertoire community as a model for FAIR stewardship of big immunology data","year":2020,"lang":"en","type":"review","venue":"Current Opinion in Systems Biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"Canadian Institutes of Health Research; H2020 European Research Council; Canada Excellence Research Chairs, Government of Canada; Canarie","keywords":"Interoperability; Repertoire; Big data; Computational biology; Biological network; Stewardship (theology); Data science; Acquired immune system; Systems biology; Immune system; Computer science; Immune receptor; Biology; World Wide Web; Immunology; Data mining; Political science","authors":[{"name":"Jamie K. Scott","is_ca":true},{"name":"Felix Breden","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2859391799125159,"gpt":0.3995658094476534,"spread":0.1136266295351374,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001171977,0.0005163609,0.001728683,0.0000986122,0.0002345503,0.00002411151,0.002217355,0.0008919465,9.198888e-7],"category_scores_gemma":[0.0005199625,0.0003671893,0.0004222232,0.0001882815,0.0004281954,0.000004866985,0.0008264444,0.0008156993,0.000006590863],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007314117,"about_ca_system_score_gemma":0.0007948651,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002922342,"about_ca_topic_score_gemma":0.00004364091,"domain_scores_codex":[0.9954346,0.001821061,0.001474473,0.0007394521,0.00009448024,0.0004359023],"domain_scores_gemma":[0.9965608,0.0003856001,0.0008989729,0.00190673,0.0001775738,0.00007037212],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005495849,0.0002841905,0.00001779358,0.01300959,0.0006796698,1.613207e-7,0.0002185648,0.00001622504,0.001406806,0.00233789,0.001697228,0.9797823],"study_design_scores_gemma":[0.0006146468,0.0006811967,7.708745e-7,0.003912114,0.00007913658,0.00001497956,0.0001878276,0.001301101,0.00002594313,0.0000710851,0.9927465,0.0003646678],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00005609526,0.9813456,0.004525271,0.0000392588,0.009678234,0.001819604,0.002484181,0.00001754609,0.00003421862],"genre_scores_gemma":[0.002951994,0.985433,0.0000763615,0.000005309264,0.0007867026,0.0004955063,0.01012964,0.0000654797,0.00005597356],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9910493,"threshold_uncertainty_score":0.999878,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4391648790","doi":"10.1016/j.coisb.2024.100509","title":"Neural signaling in neuropathic pain: A computational modeling perspective","year":2024,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Neuropathic pain; Neurostimulation; Neuroscience; Computational model; Medicine; Neurophysiology; Disease; Neuralgia; Computer science; Bioinformatics; Psychology; Artificial intelligence; Pathology; Biology","authors":[{"name":"Xinyue Ma","is_ca":true},{"name":"Anmar Khadra","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09833730352220635,"gpt":0.3845719085877164,"spread":0.28623460506551,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001058466,0.0001394112,0.0002721395,0.0003367107,0.00002622647,0.00002107276,0.00004820869,0.00008548419,0.000006711585],"category_scores_gemma":[0.0001352327,0.0001150701,0.00006072215,0.0002654371,0.00002268053,0.00004155397,0.00002469697,0.0002911086,0.00002003582],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002214336,"about_ca_system_score_gemma":0.00009643618,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001458192,"about_ca_topic_score_gemma":0.000001653814,"domain_scores_codex":[0.9983096,0.0006387283,0.0003508368,0.0003790702,0.00009961059,0.0002221805],"domain_scores_gemma":[0.9995152,0.0002480628,0.00003366049,0.00008738984,0.0000621224,0.00005355325],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0004677305,0.00161626,0.1998725,0.006744014,0.0002994433,0.0004194338,0.00986421,0.3971455,0.003378685,0.3135791,0.0003836976,0.06622947],"study_design_scores_gemma":[0.0006522842,0.0001777604,0.0005675101,0.001613786,0.00000632132,0.00006097376,0.000560928,0.9931452,0.000001552396,0.00275466,0.0003619009,0.0000970967],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5700359,0.1407007,0.2565534,0.001682039,0.02803363,0.002331038,0.00006644216,0.0003591393,0.0002377625],"genre_scores_gemma":[0.9991553,0.0001309529,0.00008634584,0.00002433152,0.0004063993,0.00008228003,0.00009398229,0.00001493705,0.000005489763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5959998,"threshold_uncertainty_score":0.4692421,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4386170653","doi":"10.1016/j.coisb.2023.100472","title":"Evolution of new metabolic pathways and microbial communities","year":2023,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Organism; Metabolic pathway; Biology; Horizontal gene transfer; Repertoire; Computational biology; Evolutionary biology; Ecology; Gene; Genetics; Phylogenetics","authors":[{"name":"Dan Kehila","is_ca":true},{"name":"Kimberly Tsz Ching Wong","is_ca":true},{"name":"Nobuhiko Tokuriki","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04553398708535621,"gpt":0.2911405368642513,"spread":0.2456065497788951,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002609718,0.0001043905,0.0001949609,0.0001570789,0.00002711117,0.000006084093,0.00009539074,0.0001219398,0.000001378877],"category_scores_gemma":[0.0000330472,0.00009699848,0.00003410711,0.0001929686,0.00006821235,0.000002821086,0.00008469413,0.00007702582,0.000005073435],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008097574,"about_ca_system_score_gemma":0.00004464322,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003946598,"about_ca_topic_score_gemma":0.00001129758,"domain_scores_codex":[0.9992768,0.0001080025,0.0002553462,0.0001679773,0.00003060609,0.0001612968],"domain_scores_gemma":[0.9996555,0.000005108703,0.00007786497,0.0001900468,0.00003797324,0.000033442],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002259613,0.00002256637,0.01004891,0.0001996478,0.00001623912,2.319193e-8,0.000216169,0.0001848856,0.9783055,0.003155487,0.003210065,0.0046179],"study_design_scores_gemma":[0.001650564,0.0003047001,0.0563605,0.0003982461,0.00001729826,0.00005217404,0.001184401,0.0004116791,0.04301705,0.0002106883,0.8959008,0.0004919112],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9580582,0.03393953,0.0008441716,0.00002551604,0.006869528,0.0001727615,0.0000513928,0.0000257112,0.00001316478],"genre_scores_gemma":[0.9927533,0.005829604,0.00002961865,0.000001326791,0.001014948,0.00001288385,0.0003013813,0.000008958527,0.00004793753],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9352885,"threshold_uncertainty_score":0.3955483,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4399206083","doi":"10.1016/j.coisb.2024.100519","title":"ODE-based models of signaling networks in autophagy","year":2024,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Deutsche Forschungsgemeinschaft; Austrian Science Fund; European Commission; HORIZON EUROPE Framework Programme; Ministère de l'Économie, de la Science et de l'Innovation - Québec","keywords":"Ode; Autophagy; Computer science; Biology; Mathematics; Genetics; Applied mathematics","authors":[{"name":"Markus Galhuber","is_ca":false},{"name":"Kathrin Thedieck","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0794962287273232,"gpt":0.378053885252995,"spread":0.2985576565256718,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003764539,0.0001460154,0.0004326988,0.0003543831,0.00001144031,0.000008654524,0.00009135104,0.0001766848,0.00002986953],"category_scores_gemma":[0.00001454358,0.0001203961,0.00009806131,0.0003680095,0.00006637379,0.00004397291,0.00001949495,0.0002524236,0.000008606962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000853711,"about_ca_system_score_gemma":0.0001747077,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007148989,"about_ca_topic_score_gemma":8.668318e-7,"domain_scores_codex":[0.9986038,0.0001715838,0.0005789382,0.0003034659,0.0000909835,0.0002512544],"domain_scores_gemma":[0.999472,0.0001490191,0.00007431825,0.0002033724,0.00003699007,0.00006433071],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001989401,0.002908664,0.1183528,0.02423511,0.0005464246,0.000141324,0.00270554,0.4479043,0.01519038,0.238986,0.00406367,0.1429763],"study_design_scores_gemma":[0.001912222,0.0002526986,0.002739419,0.005983095,0.00001623116,0.0000123388,0.00007007227,0.98019,0.0005257909,0.001430654,0.006676771,0.0001907017],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5218501,0.3938913,0.06094944,0.0001551398,0.02127556,0.001300883,0.00005296836,0.0001869441,0.0003376225],"genre_scores_gemma":[0.9982902,0.0009005601,0.00002596121,0.00001742563,0.0005079236,0.00009550414,0.0001327441,0.00001766139,0.00001195718],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5322856,"threshold_uncertainty_score":0.4909611,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4414805233","doi":"10.1016/j.coisb.2025.100560","title":"Machine-learned summary statistics for Bayesian inference of systems biology–model parameters: Opportunities and challenges","year":2025,"lang":"en","type":"article","venue":"Current Opinion in Systems Biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft; Deutsches Forschungszentrum für Künstliche Intelligenz","keywords":"Interpretability; Overfitting; Inference; Identifiability; Selection (genetic algorithm); Model selection; Bayesian inference; Deep learning","authors":[{"name":"Atiyeh Ahmadi","is_ca":true},{"name":"Lena Podina","is_ca":true},{"name":"Sebastian Höpfl","is_ca":false},{"name":"Brian Ingalls","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1277649090086264,"gpt":0.3594507619298091,"spread":0.2316858529211827,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005375247,0.00023947,0.0005555538,0.0002411941,0.00005168426,0.00001619692,0.0002285166,0.0003182089,6.714386e-7],"category_scores_gemma":[0.0001413229,0.0002208957,0.00007673443,0.00009551574,0.0002452506,0.0000043964,0.000151214,0.00009403346,2.840736e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002305328,"about_ca_system_score_gemma":0.0001559348,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000603454,"about_ca_topic_score_gemma":0.00001919482,"domain_scores_codex":[0.9980997,0.0003862954,0.0006496276,0.0005100346,0.0000513729,0.0003029947],"domain_scores_gemma":[0.9989154,0.0001699388,0.0002871379,0.0003944317,0.0001659228,0.00006722275],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0006746633,0.0005455267,0.1259597,0.01786069,0.001548615,8.510893e-7,0.0004597514,0.02381254,0.01602556,0.6625193,0.007994561,0.1425982],"study_design_scores_gemma":[0.004886804,0.001987304,0.002579777,0.00294998,0.0002852964,0.00001952051,0.002770447,0.5610018,0.0008703904,0.01163617,0.409225,0.00178753],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.0297422,0.583232,0.3769237,0.0003734404,0.006298695,0.001524878,0.001630847,0.00003440674,0.0002398931],"genre_scores_gemma":[0.9148954,0.08280119,0.0006254786,0.000008431585,0.0001394301,0.0002322216,0.00119175,0.00001630681,0.00008974614],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.8851532,"threshold_uncertainty_score":0.9007865,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}