{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":49,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":49,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"dfb9885fdc22","filters":{"venue":"Fungal Diversity"}},"results":[{"id":"W1928057741","doi":"10.1007/s13225-015-0351-8","title":"The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts","year":2015,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":716,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Royal Ontario Museum; University of Toronto","funders":"","keywords":"Herbarium; Metadata; Database; Taxonomic rank; Taxonomy (biology); Phylogenetic tree; Information retrieval; Biology; Computer science; Ecology; World Wide Web; Taxon","authors":[{"name":"Subashini C. Jayasiri","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Hiran A. Ariyawansa","is_ca":false},{"name":"Jayarama D. Bhat","is_ca":false},{"name":"Bart Buyck","is_ca":false},{"name":"Lei Cai","is_ca":false},{"name":"Yu‐Cheng Dai","is_ca":false},{"name":"Kamel A. Abd–Elsalam","is_ca":false},{"name":"Damien Ertz","is_ca":false},{"name":"Iman Hidayat","is_ca":false},{"name":"Rajesh Jeewon","is_ca":false},{"name":"E. B. Gareth Jones","is_ca":false},{"name":"Ali H. Bahkali","is_ca":false},{"name":"Samantha C. Karunarathna","is_ca":false},{"name":"Jian‐Kui Liu","is_ca":false},{"name":"Janet Jennifer Luangsa-ard","is_ca":false},{"name":"H. Thorsten Lumbsch","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Eric H. C. McKenzie","is_ca":false},{"name":"Jean‐Marc Moncalvo","is_ca":true},{"name":"Masoomeh Ghobad‐Nejhad","is_ca":false},{"name":"R. Henrik Nilsson","is_ca":false},{"name":"Ka‐Lai Pang","is_ca":false},{"name":"Olinto Liparini Pereira","is_ca":false},{"name":"Alan J. L. Phillips","is_ca":false},{"name":"Olivier Raspé","is_ca":false},{"name":"Adam W. Rollins","is_ca":false},{"name":"Andrea I. Romero","is_ca":false},{"name":"Javier Etayo","is_ca":false},{"name":"Faruk Selçuk","is_ca":false},{"name":"Steven L. Stephenson","is_ca":false},{"name":"Satinee Suetrong","is_ca":false},{"name":"Joanne E. Taylor","is_ca":false},{"name":"Clement K. M. Tsui","is_ca":true},{"name":"Alfredo Vizzini","is_ca":false},{"name":"Mohamed A. Abdel‐Wahab","is_ca":false},{"name":"Ting‐Chi Wen","is_ca":false},{"name":"Saranyaphat Boonmee","is_ca":false},{"name":"Dong Qin Dai","is_ca":false},{"name":"Dinushani A. Daranagama","is_ca":false},{"name":"Asha J. Dissanayake","is_ca":false},{"name":"Anusha H. Ekanayaka","is_ca":false},{"name":"Sally C. Fryar","is_ca":false},{"name":"Sinang Hongsanan","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"Wenjing Li","is_ca":false},{"name":"Rekhani H. Perera","is_ca":false},{"name":"Rungtiwa Phookamsak","is_ca":false},{"name":"Nimali I. de Silva","is_ca":false},{"name":"Kasun M. Thambugala","is_ca":false},{"name":"Qing Tian","is_ca":false},{"name":"Nalin N. Wijayawardene","is_ca":false},{"name":"Rui-Lin Zhao","is_ca":false},{"name":"Qi Zhao","is_ca":false},{"name":"Ji-Chuan Kang","is_ca":false},{"name":"Itthayakorn Promputtha","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02981230414732451,"gpt":0.2241575576893419,"spread":0.1943452535420174,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008437415,0.001360436,0.001335075,0.006401577,0.0007526571,0.003080508,0.00141543,0.001079668,0.1061512],"category_scores_gemma":[0.004924127,0.0006797081,0.0008488351,0.006734452,0.0003512338,0.002856044,0.002737527,0.001149088,0.08216621],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005100921,"about_ca_system_score_gemma":0.001280789,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007511321,"about_ca_topic_score_gemma":0.008496472,"domain_scores_codex":[0.9994487,0.00006316935,0.0001194308,0.0001335536,0.0001607001,0.00007443452],"domain_scores_gemma":[0.9982954,0.0004163714,0.0002983484,0.0004038549,0.0002618427,0.0003242593],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008299816,0.000121833,0.0103959,0.002524253,0.0000994529,0.0003046912,0.0003897118,0.0006342339,0.004142036,0.003066097,0.8767053,0.1007865],"study_design_scores_gemma":[0.000128313,0.00005155249,0.02383526,0.0004274288,0.00007247402,0.0004979611,0.0002866026,0.0009017771,0.001745291,0.002526178,0.9694473,0.00007996981],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.003763716,0.00099084,0.002600755,0.0002635623,0.0001376357,0.00006750955,0.9732267,0.007422228,0.01152699],"genre_scores_gemma":[0.01039492,0.001179805,0.00802738,0.0001451008,0.00009249398,0.0001421171,0.9731264,0.00136103,0.005530774],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.1061512,"threshold_uncertainty_score":0.355111,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2803566787","doi":"10.1007/s13225-018-0401-0","title":"High-level classification of the Fungi and a tool for evolutionary ecological analyses","year":2018,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":707,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"Eesti Teadusfondi","keywords":"Phylum; Biology; Monophyly; Taxonomic rank; Taxon; Phylogenetic tree; Tree of life (biology); Evolutionary biology; Phylogenetics; Ecology; Clade; Paleontology","authors":[{"name":"Leho Tedersoo","is_ca":false},{"name":"Santiago Sánchez‐Ramírez","is_ca":true},{"name":"Urmas Kõljalg","is_ca":false},{"name":"Mohammad Bahram","is_ca":false},{"name":"Markus Döring","is_ca":false},{"name":"Dmitry Schigel","is_ca":false},{"name":"Tom W. May","is_ca":false},{"name":"Martin Ryberg","is_ca":false},{"name":"Kessy Abarenkov","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08263561745056185,"gpt":0.2613827684879217,"spread":0.1787471510373598,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004782622,0.001560857,0.001169024,0.006533533,0.002071004,0.005366543,0.001845542,0.001392429,0.0136233],"category_scores_gemma":[0.0161366,0.0009571521,0.001734903,0.005255657,0.001395219,0.005172371,0.002361321,0.003511979,0.008256137],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001068378,"about_ca_system_score_gemma":0.00120231,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001332078,"about_ca_topic_score_gemma":0.001260787,"domain_scores_codex":[0.9967834,0.001007414,0.0005579271,0.0008020602,0.0006778516,0.0001714024],"domain_scores_gemma":[0.98988,0.005015323,0.001352416,0.002013606,0.001132745,0.0006059448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0007830447,0.0006585979,0.0288941,0.002162043,0.000296084,0.001006257,0.0026267,0.007511929,0.06849617,0.07188107,0.1052071,0.7104771],"study_design_scores_gemma":[0.000222609,0.0004943918,0.05336136,0.001121888,0.0002782939,0.001398335,0.001627193,0.225549,0.04946729,0.2531021,0.4129049,0.0004725598],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.01023149,0.0002778881,0.9334685,0.0005689983,0.00027682,0.0003054834,0.01278307,0.03788158,0.004206208],"genre_scores_gemma":[0.0332896,0.0001345897,0.9491414,0.0002247778,0.00009006399,0.0005758919,0.01269805,0.002319467,0.001526006],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.0136233,"threshold_uncertainty_score":0.04557449,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2990643258","doi":"10.1007/s13225-019-00435-4","title":"Notes, outline and divergence times of Basidiomycota","year":2019,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":470,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"","keywords":"Basidiomycota; Biology; Ascomycota; Phylum; Phylogenetic tree; Taxonomic rank; Genus; Clade; Phylogenetics; Divergence (linguistics); Evolutionary biology; Zoology; Ecology; Botany; Paleontology; Taxon","authors":[{"name":"Mao-Qiang He","is_ca":false},{"name":"Rui-Lin Zhao","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Dominik Begerow","is_ca":false},{"name":"Martin Kemler","is_ca":false},{"name":"Andrey Yurkov","is_ca":false},{"name":"Eric H. C. McKenzie","is_ca":false},{"name":"Olivier Raspé","is_ca":false},{"name":"Makoto Kakishima","is_ca":false},{"name":"Santiago Sánchez‐Ramírez","is_ca":true},{"name":"Else C. Vellinga","is_ca":false},{"name":"Roy E. Halling","is_ca":false},{"name":"Viktor Papp","is_ca":false},{"name":"Ivan V. Zmitrovich","is_ca":false},{"name":"Bart Buyck","is_ca":false},{"name":"Damien Ertz","is_ca":false},{"name":"Nalin N. Wijayawardene","is_ca":false},{"name":"Bao‐Kai Cui","is_ca":false},{"name":"Nathan Schoutteten","is_ca":false},{"name":"Xin-Zhan Liu","is_ca":false},{"name":"Tai-Hui Li","is_ca":false},{"name":"Yi-Jian Yao","is_ca":false},{"name":"Xin-Yu Zhu","is_ca":false},{"name":"An-Qi Liu","is_ca":false},{"name":"Guojie Li","is_ca":false},{"name":"Ming-Zhe Zhang","is_ca":false},{"name":"Zhi-Lin Ling","is_ca":false},{"name":"Bin Cao","is_ca":false},{"name":"Vladimír Antonín","is_ca":false},{"name":"Teun Boekhout","is_ca":false},{"name":"Bianca Denise Barbosa da Silva","is_ca":false},{"name":"Eske De Crop","is_ca":false},{"name":"Cony Decock","is_ca":false},{"name":"Bálint Dima","is_ca":false},{"name":"Arun Kumar Dutta","is_ca":false},{"name":"Jack W. Fell","is_ca":false},{"name":"József Geml","is_ca":false},{"name":"Masoomeh Ghobad‐Nejhad","is_ca":false},{"name":"Admir José Giachini","is_ca":false},{"name":"Tatiana Baptista Gibertoni","is_ca":false},{"name":"Sergio P. Gorjón","is_ca":false},{"name":"Danny Haelewaters","is_ca":false},{"name":"Shuang-Hui He","is_ca":false},{"name":"Brendan P. Hodkinson","is_ca":false},{"name":"Egon Horak","is_ca":false},{"name":"Tamotsu Hoshino","is_ca":false},{"name":"Alfredo Justo","is_ca":false},{"name":"Young Woon Lim","is_ca":false},{"name":"Nelson Menolli","is_ca":false},{"name":"Armin Mešić","is_ca":false},{"name":"Jean-Marc Moncalvo","is_ca":true},{"name":"Gregory M. Mueller","is_ca":false},{"name":"László G. Nagy","is_ca":false},{"name":"R. Henrik Nilsson","is_ca":false},{"name":"Machiel E. Noordeloos","is_ca":false},{"name":"Jorinde Nuytinck","is_ca":false},{"name":"Takamichi Orihara","is_ca":false},{"name":"R. Cheewangkoon","is_ca":false},{"name":"Mario Rajchenberg","is_ca":false},{"name":"Alexandre G. S. Silva-Filho","is_ca":false},{"name":"Marcelo A. Sulzbacher","is_ca":false},{"name":"Zdenko Tkalčec","is_ca":false},{"name":"Ricardo Valenzuela","is_ca":false},{"name":"Annemieke Verbeken","is_ca":false},{"name":"Alfredo Vizzini","is_ca":false},{"name":"Felipe Wartchow","is_ca":false},{"name":"Tie-Zheng Wei","is_ca":false},{"name":"Michael Weiß","is_ca":false},{"name":"Chang-Lin Zhao","is_ca":false},{"name":"Paul M. Kirk","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01145124316160748,"gpt":0.1823829777448982,"spread":0.1709317345832908,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007180578,0.0005859293,0.0004476078,0.006057513,0.001300923,0.001312045,0.0005863184,0.0003141389,0.0122306],"category_scores_gemma":[0.002231318,0.0002416737,0.0004765561,0.006634969,0.0005116638,0.001261212,0.0006214292,0.001353393,0.006258685],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006908067,"about_ca_system_score_gemma":0.0007721405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001772932,"about_ca_topic_score_gemma":0.002134517,"domain_scores_codex":[0.9992594,0.0001279557,0.0001190428,0.000207205,0.0002303028,0.00005609357],"domain_scores_gemma":[0.9987723,0.0003870197,0.0002460922,0.0001258911,0.0003681943,0.0001004992],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.001122068,0.00007812903,0.05318705,0.004599615,0.0002108309,0.001356283,0.005524256,0.001245408,0.03981918,0.01517975,0.07314444,0.804533],"study_design_scores_gemma":[0.00002205189,0.0001370139,0.1190149,0.0005963015,0.00009796295,0.002287447,0.001033501,0.000704827,0.005150626,0.004421035,0.8664599,0.0000744764],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.3564484,0.1585722,0.1051155,0.002692688,0.004129143,0.0008885563,0.1351264,0.004074386,0.2329527],"genre_scores_gemma":[0.5433083,0.06798035,0.1885014,0.0008572821,0.001524487,0.001623069,0.1444343,0.00196189,0.049809],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0122306,"threshold_uncertainty_score":0.04091543,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2161524306","doi":"10.1007/s13225-014-0298-1","title":"One stop shop: backbones trees for important phytopathogenic genera: I (2014)","year":2014,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":379,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Research Council of Thailand; Mae Fah Luang University; Ministerstwo Edukacji i Nauki; Kunming Institute of Botany, Chinese Academy of Sciences; Consortium of International Agricultural Research Centers; Svenska Forskningsrådet Formas; Universiti Malaya; Chinese Academy of Sciences","keywords":"Biology; Botany; Curvularia; Dothideomycetes; Bipolaris; Plant disease; Alternaria; Ascomycota","authors":[{"name":"Kevin D. Hyde","is_ca":false},{"name":"R. Henrik Nilsson","is_ca":false},{"name":"Siti Aisyah Alias","is_ca":false},{"name":"Hiran A. Ariyawansa","is_ca":false},{"name":"Jaime E. Blair","is_ca":false},{"name":"Lei Cai","is_ca":false},{"name":"Arthur W. A. M. de Cock","is_ca":false},{"name":"Asha J. Dissanayake","is_ca":false},{"name":"Sally L. Glockling","is_ca":false},{"name":"Ishani D. Goonasekara","is_ca":false},{"name":"Michał Gorczak","is_ca":false},{"name":"Matthias Hahn","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"J.A.L. van Kan","is_ca":false},{"name":"Matthew H. Laurence","is_ca":false},{"name":"C. André Lévesque","is_ca":true},{"name":"Xinghong Li","is_ca":false},{"name":"Jian‐Kui Liu","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Dimuthu S. Manamgoda","is_ca":false},{"name":"Frank N. Martin","is_ca":false},{"name":"Eric H. C. McKenzie","is_ca":false},{"name":"Alistair R. McTaggart","is_ca":false},{"name":"Peter E. Mortimer","is_ca":false},{"name":"P. V. R. Nair","is_ca":false},{"name":"Julia Pawłowska","is_ca":false},{"name":"Tara L. Rintoul","is_ca":true},{"name":"Roger G. Shivas","is_ca":false},{"name":"Christoffel F. J. Spies","is_ca":true},{"name":"Brett A. Summerell","is_ca":false},{"name":"P. W. J. Taylor","is_ca":false},{"name":"Razak Terhem","is_ca":false},{"name":"Dhanushka Udayanga","is_ca":false},{"name":"Niloofar Vaghefi","is_ca":false},{"name":"Grit Walther","is_ca":false},{"name":"Mateusz Wilk","is_ca":false},{"name":"Marta Wrzosek","is_ca":false},{"name":"Jianchu Xu","is_ca":false},{"name":"Jiye Yan","is_ca":false},{"name":"Nan Zhou","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01487245452476934,"gpt":0.2114287384593755,"spread":0.1965562839346061,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006426742,0.0007406287,0.0005441741,0.005340674,0.001510825,0.002694433,0.001014422,0.0009966253,0.05822461],"category_scores_gemma":[0.002821247,0.0006795737,0.0008483572,0.00522639,0.0003657612,0.002600495,0.001766934,0.001535081,0.03305107],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005385361,"about_ca_system_score_gemma":0.001092613,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002827011,"about_ca_topic_score_gemma":0.005115333,"domain_scores_codex":[0.9996118,0.00005079107,0.00003863657,0.00009398384,0.000133755,0.00007109065],"domain_scores_gemma":[0.9986246,0.0002705868,0.0001741515,0.0002007093,0.0004796314,0.0002503144],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0004914737,0.0002058047,0.03105513,0.00237943,0.0001297242,0.0005250714,0.002285148,0.001539196,0.01143854,0.00823583,0.587204,0.3545105],"study_design_scores_gemma":[0.00004298476,0.00007926015,0.02655432,0.0004818923,0.00006652419,0.0006279284,0.000886265,0.002903311,0.001804613,0.006370725,0.9601253,0.00005686671],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.08358432,0.009787569,0.07882338,0.003102551,0.002012428,0.001175081,0.6368626,0.06139195,0.1232601],"genre_scores_gemma":[0.09353999,0.00321791,0.2031192,0.0005956501,0.0003883243,0.0005025642,0.6654877,0.01012536,0.02302319],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.05822461,"threshold_uncertainty_score":0.1947808,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2772039660","doi":"10.1007/s13225-017-0391-3","title":"Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species","year":2017,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":305,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Incertae sedis; Dothideomycetes; Biology; Botany; Zoology; Taxonomy (biology); Ascomycota","authors":[{"name":"Kevin D. Hyde","is_ca":false},{"name":"Chada Norphanphoun","is_ca":false},{"name":"Vanessa Pereira de Abreu","is_ca":false},{"name":"Anna Bazzicalupo","is_ca":true},{"name":"K. W. Thilini Chethana","is_ca":false},{"name":"Marco Clericuzio","is_ca":false},{"name":"Monika C. Dayarathne","is_ca":false},{"name":"Asha J. Dissanayake","is_ca":false},{"name":"Anusha H. Ekanayaka","is_ca":false},{"name":"Mao-Qiang He","is_ca":false},{"name":"Sinang Hongsanan","is_ca":false},{"name":"Jinbiao Huang","is_ca":false},{"name":"Subashini C. Jayasiri","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"Anuruddha Karunarathna","is_ca":false},{"name":"Sirinapa Konta","is_ca":false},{"name":"Ivana Kušan","is_ca":false},{"name":"Hyun Lee","is_ca":false},{"name":"Junfu Li","is_ca":false},{"name":"Chuan-Gen Lin","is_ca":false},{"name":"Ning-Guo Liu","is_ca":false},{"name":"Yong‐Zhong Lu","is_ca":false},{"name":"Zong-Long Luo","is_ca":false},{"name":"Ishara S. Manawasinghe","is_ca":false},{"name":"Ausana Mapook","is_ca":false},{"name":"Rekhani H. Perera","is_ca":false},{"name":"Rungtiwa Phookamsak","is_ca":false},{"name":"Chayanard Phukhamsakda","is_ca":false},{"name":"Igor Siedlecki","is_ca":false},{"name":"Adriene Mayra Soares","is_ca":false},{"name":"Danushka S. Tennakoon","is_ca":false},{"name":"Qing Tian","is_ca":false},{"name":"Saowaluck Tibpromma","is_ca":false},{"name":"Dhanushka N. Wanasinghe","is_ca":false},{"name":"Yuan-Pin Xiao","is_ca":false},{"name":"Jing Yang","is_ca":false},{"name":"Xiang‐Yu Zeng","is_ca":false},{"name":"Faten A. Abdel-Aziz","is_ca":false},{"name":"Wenjing Li","is_ca":false},{"name":"Indunil C. Senanayake","is_ca":false},{"name":"Qiu-Ju Shang","is_ca":false},{"name":"Dinushani A. Daranagama","is_ca":false},{"name":"Nimali I. de Silva","is_ca":false},{"name":"Kasun M. Thambugala","is_ca":false},{"name":"Mohamed A. Abdel‐Wahab","is_ca":false},{"name":"Ali H. Bahkali","is_ca":false},{"name":"Mary L. Berbee","is_ca":true},{"name":"Saranyaphat Boonmee","is_ca":false},{"name":"D. Jayarama Bhat","is_ca":false},{"name":"Timur S. Bulgakov","is_ca":false},{"name":"Bart Buyck","is_ca":false},{"name":"Erio Camporesi","is_ca":false},{"name":"Rafael F. Castañeda-Ruíz","is_ca":false},{"name":"Putarak Chomnunti","is_ca":false},{"name":"Minkwan Doilom","is_ca":false},{"name":"Francesco Dovana","is_ca":false},{"name":"Tatiana Baptista Gibertoni","is_ca":false},{"name":"Margita Jadan","is_ca":false},{"name":"Rajesh Jeewon","is_ca":false},{"name":"E. B. Gareth Jones","is_ca":false},{"name":"Ji-Chuan Kang","is_ca":false},{"name":"Samantha C. Karunarathna","is_ca":false},{"name":"Young Woon Lim","is_ca":false},{"name":"Jian‐Kui Liu","is_ca":false},{"name":"Liu Zuo-yi","is_ca":false},{"name":"Helio Longoni Plautz","is_ca":false},{"name":"Saisamorn Lumyong","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Neven Matočec","is_ca":false},{"name":"Eric H. C. McKenzie","is_ca":false},{"name":"Armin Mešić","is_ca":false},{"name":"Daniel R. Miller","is_ca":false},{"name":"Julia Pawłowska","is_ca":false},{"name":"Olinto Liparini Pereira","is_ca":false},{"name":"Itthayakorn Promputtha","is_ca":false},{"name":"Andrea I. Romero","is_ca":false},{"name":"Leif Ryvarden","is_ca":false},{"name":"Hong-Yan Su","is_ca":false},{"name":"Satinee Suetrong","is_ca":false},{"name":"Zdenko Tkalčec","is_ca":false},{"name":"Alfredo Vizzini","is_ca":false},{"name":"Ting‐Chi Wen","is_ca":false},{"name":"Komsit Wisitrassameewong","is_ca":false},{"name":"Marta Wrzosek","is_ca":false},{"name":"Jianchu Xu","is_ca":false},{"name":"Qi Zhao","is_ca":false},{"name":"Rui-Lin Zhao","is_ca":false},{"name":"Peter E. Mortimer","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03195749566451251,"gpt":0.2193093724433428,"spread":0.1873518767788303,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006349111,0.0009048359,0.000546533,0.006264248,0.0009549774,0.001512703,0.0006672922,0.0004112447,0.1243558],"category_scores_gemma":[0.002383525,0.0003539688,0.0004715686,0.01050544,0.0008404007,0.001851459,0.00159011,0.001502271,0.04591947],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005715099,"about_ca_system_score_gemma":0.0009068634,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004209277,"about_ca_topic_score_gemma":0.004845016,"domain_scores_codex":[0.9994212,0.00008254495,0.00007094638,0.00009348388,0.0002659324,0.00006592296],"domain_scores_gemma":[0.9987983,0.0004383437,0.000167935,0.0001379003,0.0003003548,0.0001572235],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0002992189,0.00006819895,0.003900488,0.001185763,0.00004143784,0.0002701226,0.001927323,0.000287569,0.01124518,0.007680849,0.4203777,0.5527162],"study_design_scores_gemma":[0.00001398138,0.00004798756,0.01896246,0.0004126057,0.00001177087,0.0006117848,0.0004190236,0.0000655817,0.0007097913,0.002110565,0.9766151,0.00001935946],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"other","genre_gemma":"empirical","genre_scores_codex":[0.03422404,0.105181,0.02026928,0.005665577,0.008287016,0.0006571262,0.1167053,0.002440265,0.7065703],"genre_scores_gemma":[0.210371,0.1209828,0.05590028,0.002327076,0.00830457,0.0009018052,0.1844328,0.002990833,0.4137889],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.1243558,"threshold_uncertainty_score":0.4160116,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3010758724","doi":"10.1007/s13225-020-00439-5","title":"Fungal diversity notes 1151–1276: taxonomic and phylogenetic contributions on genera and species of fungal taxa","year":2020,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":284,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Population and Public Health; Harvard University; Ministry of Science and Technology of the People's Republic of China; Smithsonian Tropical Research Institute; Royal Golden Jubilee (RGJ) Ph.D. Programme; National Science Foundation; Science and Engineering Research Board; Pró-Reitoria de Pesquisa e Pós-Graduação, Universidade Federal do Pará; David Rockefeller Center for Latin American Studies, Harvard University; Debreceni Egyetem; University of Mauritius; Thailand Research Fund; Mae Fah Luang University; Emberi Eroforrások Minisztériuma; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Kunming Institute of Botany, Chinese Academy of Sciences; Chiang Mai University; China Postdoctoral Science Foundation; Deutscher Akademischer Austauschdienst; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Smithsonian Institution; National Natural Science Foundation of China; Ministry of Earth Sciences; Chinese Academy of Sciences; King Saud University","keywords":"Incertae sedis; Biology; Dothideomycetes; Botany; Taxon; Zoology; Ascomycota","authors":[{"name":"Kevin D. Hyde","is_ca":false},{"name":"Yang Dong","is_ca":false},{"name":"Rungtiwa Phookamsak","is_ca":false},{"name":"Rajesh Jeewon","is_ca":false},{"name":"D. Jayarama Bhat","is_ca":false},{"name":"E. B. Gareth Jones","is_ca":false},{"name":"Ning-Guo Liu","is_ca":false},{"name":"Pranami D. Abeywickrama","is_ca":false},{"name":"Ausana Mapook","is_ca":false},{"name":"De-Ping Wei","is_ca":false},{"name":"Rekhani H. Perera","is_ca":false},{"name":"Ishara S. Manawasinghe","is_ca":false},{"name":"Dhandevi Pem","is_ca":false},{"name":"Digvijayini Bundhun","is_ca":false},{"name":"Anuruddha Karunarathna","is_ca":false},{"name":"Anusha H. Ekanayaka","is_ca":false},{"name":"Dan-Feng Bao","is_ca":false},{"name":"Junfu Li","is_ca":false},{"name":"Milan C. Samarakoon","is_ca":false},{"name":"Napalai Chaiwan","is_ca":false},{"name":"Chuan-Gen Lin","is_ca":false},{"name":"Kunthida Phutthacharoen","is_ca":false},{"name":"Shengnan Zhang","is_ca":false},{"name":"Indunil C. Senanayake","is_ca":false},{"name":"Ishani D. Goonasekara","is_ca":false},{"name":"Kasun M. Thambugala","is_ca":false},{"name":"Chayanard Phukhamsakda","is_ca":false},{"name":"Danushka S. Tennakoon","is_ca":false},{"name":"Hong-Bo Jiang","is_ca":false},{"name":"Jing Yang","is_ca":false},{"name":"Ming Zeng","is_ca":false},{"name":"Naruemon Huanraluek","is_ca":false},{"name":"Jian‐Kui Liu","is_ca":false},{"name":"Subodini N. Wijesinghe","is_ca":false},{"name":"Qing Tian","is_ca":false},{"name":"Saowaluck Tibpromma","is_ca":false},{"name":"Rashika S. Brahmanage","is_ca":false},{"name":"Saranyaphat Boonmee","is_ca":false},{"name":"Jinbiao Huang","is_ca":false},{"name":"Vinodhini Thiyagaraja","is_ca":false},{"name":"Yong‐Zhong Lu","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"Wei Dong","is_ca":false},{"name":"Er-Fu Yang","is_ca":false},{"name":"Sanjay K. Singh","is_ca":false},{"name":"Shiv M. Singh","is_ca":false},{"name":"Shiwali Rana","is_ca":false},{"name":"Sneha S. Lad","is_ca":false},{"name":"G. Anand","is_ca":false},{"name":"Bandarupalli Devadatha","is_ca":false},{"name":"M Niranjan","is_ca":false},{"name":"V. Venkateswara Sarma","is_ca":false},{"name":"Kare Liimatainen","is_ca":false},{"name":"Begoña Aguirre-Hudson","is_ca":false},{"name":"Tuula Niskanen","is_ca":false},{"name":"Andy Overall","is_ca":false},{"name":"Renato Lúcio Mendes Alvarenga","is_ca":false},{"name":"Tatiana Baptista Gibertoni","is_ca":false},{"name":"Walter P. Pfliegler","is_ca":false},{"name":"Enikő Horváth","is_ca":false},{"name":"Alexandra Imre","is_ca":false},{"name":"Amanda Lucia Alves","is_ca":false},{"name":"Ana Carla da Silva Santos","is_ca":false},{"name":"Patrícia Vieira Tiago","is_ca":false},{"name":"Timur S. Bulgakov","is_ca":false},{"name":"Dhanushaka N. Wanasinghe","is_ca":false},{"name":"Ali H. Bahkali","is_ca":false},{"name":"Mingkwan Doilom","is_ca":false},{"name":"Abdallah M. Elgorban","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Kunhiraman C. Rajeshkumar","is_ca":false},{"name":"Danny Haelewaters","is_ca":false},{"name":"Peter E. Mortimer","is_ca":false},{"name":"Qi Zhao","is_ca":false},{"name":"Saisamorn Lumyong","is_ca":false},{"name":"Jianchu Xu","is_ca":false},{"name":"Jun Sheng","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02356725057540086,"gpt":0.2034078189601018,"spread":0.179840568384701,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007780507,0.0007568297,0.0002849211,0.007448898,0.001004548,0.001183722,0.0006323225,0.0003048321,0.02810237],"category_scores_gemma":[0.002071846,0.0002275173,0.0003356233,0.01025031,0.0006987619,0.001381583,0.001510306,0.001143428,0.008261247],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008447358,"about_ca_system_score_gemma":0.0007776735,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00419916,"about_ca_topic_score_gemma":0.006893721,"domain_scores_codex":[0.9991472,0.0001243428,0.00008726208,0.0001063294,0.000443627,0.0000911747],"domain_scores_gemma":[0.9981604,0.00051666,0.0003430016,0.000179476,0.0005951173,0.0002053729],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001647263,0.00006809614,0.01725457,0.0007821763,0.00005137176,0.0003467295,0.001742806,0.0005839251,0.01368201,0.005062203,0.1147359,0.8455256],"study_design_scores_gemma":[0.000008998758,0.00006322297,0.07882189,0.0004846801,0.00002341091,0.001249221,0.000822585,0.000393182,0.002515093,0.00213592,0.9134445,0.00003732533],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.1549586,0.08647455,0.03746648,0.004972131,0.007257774,0.0005940122,0.07030912,0.001298427,0.6366689],"genre_scores_gemma":[0.4588105,0.09355613,0.1021916,0.001775136,0.006748854,0.0006554308,0.1102107,0.001201267,0.2248504],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.02810237,"threshold_uncertainty_score":0.09401178,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2084222310","doi":"10.1007/s13225-014-0283-8","title":"Molecular phylogenetic analyses redefine seven major clades and reveal 22 new generic clades in the fungal family Boletaceae","year":2014,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":239,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Clade; Subfamily; Systematics; Phylogenetic tree; Zoology; Taxonomy (biology); Genus; Evolutionary biology; Genetics; Gene","authors":[{"name":"Gang Wu","is_ca":false},{"name":"Bang Feng","is_ca":false},{"name":"Jianping Xu","is_ca":true},{"name":"Xue-Tai Zhu","is_ca":false},{"name":"Yan-Chun Li","is_ca":false},{"name":"Nian-Kai Zeng","is_ca":false},{"name":"Md. Iqbal Hosen","is_ca":false},{"name":"Zhu L. Yang","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03367772915755129,"gpt":0.2336596532705785,"spread":0.1999819241130272,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003720967,0.0005522007,0.0003578833,0.00197903,0.0005185582,0.000852446,0.0002488206,0.000286593,0.001202661],"category_scores_gemma":[0.0004884453,0.000185522,0.0003760827,0.001701509,0.000307536,0.0003979729,0.0004769365,0.0006228538,0.0007440393],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003150937,"about_ca_system_score_gemma":0.0002713103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006878088,"about_ca_topic_score_gemma":0.001410952,"domain_scores_codex":[0.9998606,0.00002794763,0.00001243798,0.00004486012,0.00001997704,0.00003411155],"domain_scores_gemma":[0.9997188,0.00006642025,0.0001010779,0.0000307845,0.00003663799,0.00004632164],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007676858,0.0001227199,0.386988,0.0008503449,0.0002977425,0.0008612724,0.002846452,0.001177396,0.3956092,0.001277912,0.00066836,0.2085329],"study_design_scores_gemma":[0.00004102291,0.0001512798,0.9655058,0.0002083242,0.0001934998,0.001278442,0.001277264,0.002531045,0.006519427,0.000710729,0.02155209,0.00003111322],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9875112,0.005914799,0.003571919,0.00009050561,0.00001253529,0.00003251488,0.0008888421,0.00008909412,0.001888711],"genre_scores_gemma":[0.9848095,0.002604316,0.007614703,0.00007430313,0.00001341441,0.00004673432,0.003738633,0.00002267986,0.001075736],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00197903,"threshold_uncertainty_score":0.004023314,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4200397826","doi":"10.1007/s13225-021-00489-3","title":"Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa","year":2021,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":204,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministry of Education and Child Care","funders":"","keywords":"Biology; Taxon; Zoology; Taxonomy (biology); Phylogenetic tree; Fungal Diversity; Biodiversity; Mycology; Botany; Ecology","authors":[{"name":"Saranyaphat Boonmee","is_ca":false},{"name":"Dhanushka N. Wanasinghe","is_ca":false},{"name":"Mark S. Calabon","is_ca":false},{"name":"Naruemon Huanraluek","is_ca":false},{"name":"S Chandrasiri","is_ca":false},{"name":"Gareth E. Jones","is_ca":false},{"name":"Walter Rossi","is_ca":false},{"name":"Marco Leonardi","is_ca":false},{"name":"Sanjay K. Singh","is_ca":false},{"name":"Shiwali Rana","is_ca":false},{"name":"Paras Nath Singh","is_ca":false},{"name":"Deepak Kumar Maurya","is_ca":false},{"name":"Ajay C. Lagashetti","is_ca":false},{"name":"Deepika Choudhary","is_ca":false},{"name":"Yu‐Cheng Dai","is_ca":false},{"name":"Changlin Zhao","is_ca":false},{"name":"Yan-Hong Mu","is_ca":false},{"name":"Hai‐Sheng Yuan","is_ca":false},{"name":"Shuang‐Hui He","is_ca":false},{"name":"Rungtiwa Phookamsak","is_ca":false},{"name":"Hong-Bo Jiang","is_ca":false},{"name":"María P. Martín","is_ca":false},{"name":"Margarita Dueñas","is_ca":false},{"name":"M. Teresa Tellería","is_ca":false},{"name":"Izabela Kałucka","is_ca":false},{"name":"Andrzej M. Jagodziński","is_ca":false},{"name":"Kare Liimatainen","is_ca":false},{"name":"Diana S. Pereira","is_ca":false},{"name":"Alan J. L. Phillips","is_ca":false},{"name":"Nakarin Suwannarach","is_ca":false},{"name":"Jaturong Kumla","is_ca":false},{"name":"Surapong Khuna","is_ca":false},{"name":"Saisamorn Lumyong","is_ca":false},{"name":"Tarynn B. Potter","is_ca":false},{"name":"Roger G. Shivas","is_ca":false},{"name":"Adam Sparks","is_ca":false},{"name":"Niloofar Vaghefi","is_ca":false},{"name":"Mohamed A. Abdel‐Wahab","is_ca":false},{"name":"Faten A. Abdel-Aziz","is_ca":false},{"name":"Guojie Li","is_ca":false},{"name":"Wen-Fei Lin","is_ca":false},{"name":"Upendra Singh","is_ca":false},{"name":"R. P. Bhatt","is_ca":false},{"name":"Hyang Burm Lee","is_ca":false},{"name":"Thuong T. T. Nguyen","is_ca":false},{"name":"Paul M. Kirk","is_ca":false},{"name":"Arun Kumar Dutta","is_ca":false},{"name":"Krishnendu Acharya","is_ca":false},{"name":"V. Venkateswara Sarma","is_ca":false},{"name":"M Niranjan","is_ca":false},{"name":"Kunhiraman C. Rajeshkumar","is_ca":false},{"name":"Nikhil Ashtekar","is_ca":false},{"name":"Sneha S. Lad","is_ca":false},{"name":"Nalin N. Wijayawardene","is_ca":false},{"name":"Darbe J. Bhat","is_ca":false},{"name":"Rong-Ju Xu","is_ca":false},{"name":"Subodini N. Wijesinghe","is_ca":false},{"name":"H. F. Shen","is_ca":false},{"name":"Zong-Long Luo","is_ca":false},{"name":"Jingyi Zhang","is_ca":false},{"name":"Phongeun Sysouphanthong","is_ca":false},{"name":"Naritsada Thongklang","is_ca":false},{"name":"Dan-Feng Bao","is_ca":false},{"name":"Janith V. S. Aluthmuhandiram","is_ca":false},{"name":"Jafar Abdollahzadeh","is_ca":false},{"name":"Alireza Javadi","is_ca":false},{"name":"Francesco Dovana","is_ca":false},{"name":"Muhammad Usman","is_ca":false},{"name":"Abdul Nasir Khalid","is_ca":false},{"name":"Asha J. Dissanayake","is_ca":false},{"name":"Anusha Telagathoti","is_ca":false},{"name":"Maraike Probst","is_ca":false},{"name":"Ursula Peintner","is_ca":false},{"name":"Isaac Garrido‐Benavent","is_ca":false},{"name":"Lilla Bóna","is_ca":false},{"name":"Zsolt Merényi","is_ca":false},{"name":"Lajos Boros","is_ca":false},{"name":"Zoltán Bratek","is_ca":false},{"name":"J. Benjamin Stielow","is_ca":false},{"name":"Ning Jiang","is_ca":false},{"name":"Chengming Tian","is_ca":false},{"name":"E. Shams","is_ca":false},{"name":"Farzaneh Dehghanizadeh","is_ca":false},{"name":"A. Pordel","is_ca":false},{"name":"M. Javan‐Nikkhah","is_ca":false},{"name":"Teodor T. Denchev","is_ca":false},{"name":"Cvetomir M. Denchev","is_ca":false},{"name":"Martin Kemler","is_ca":false},{"name":"Dominik Begerow","is_ca":false},{"name":"Chun-Ying Deng","is_ca":false},{"name":"Emma Harrower","is_ca":false},{"name":"Tohir A. Bozorov","is_ca":false},{"name":"T. N. Kholmuradova","is_ca":false},{"name":"Yusufjon Gafforov","is_ca":false},{"name":"Aziz Abdurazakov","is_ca":false},{"name":"Jianchu Xu","is_ca":false},{"name":"Peter E. Mortimer","is_ca":false},{"name":"Guang-Cong Ren","is_ca":false},{"name":"Rajesh Jeewon","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Chayanard Phukhamsakda","is_ca":true},{"name":"Ausana Mapook","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01719007565117192,"gpt":0.206795482544364,"spread":0.1896054068931921,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001224395,0.0009986354,0.0005490094,0.008722526,0.001216973,0.001345709,0.001000165,0.0004976094,0.03591609],"category_scores_gemma":[0.002740586,0.0004082056,0.0004653408,0.0140648,0.0009266346,0.001746336,0.002321803,0.001977955,0.009737511],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001106314,"about_ca_system_score_gemma":0.001203729,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005762322,"about_ca_topic_score_gemma":0.01145209,"domain_scores_codex":[0.9987281,0.0001665027,0.0001163555,0.000185659,0.0006559616,0.0001474479],"domain_scores_gemma":[0.9978243,0.0007517767,0.0004098944,0.0003481347,0.0004127654,0.0002531997],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0008896709,0.0001873263,0.04399886,0.001892295,0.0002633581,0.0008055801,0.002707965,0.001396482,0.08186644,0.01448672,0.07231952,0.7791858],"study_design_scores_gemma":[0.00006164284,0.0002123884,0.3033083,0.0006278671,0.0001104233,0.002993372,0.001386715,0.0009716596,0.01600708,0.006538989,0.6676913,0.00009035532],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"other","genre_gemma":"empirical","genre_scores_codex":[0.2049544,0.03240561,0.05352086,0.002166612,0.001950886,0.0008823551,0.2213564,0.001375519,0.4813873],"genre_scores_gemma":[0.5212262,0.02265799,0.1158781,0.0004722037,0.001651438,0.001059814,0.268655,0.0009164931,0.06748267],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.03591609,"threshold_uncertainty_score":0.1201513,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4211188431","doi":"10.1007/s13225-020-00463-5","title":"Freshwater Dothideomycetes","year":2020,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":191,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Sichuan Province Science and Technology Support Program; National Natural Science Foundation of China","keywords":"Biology; Dothideomycetes; Hyphomycetes; Botany; Cypriniformes; Zoology; Ecology; Phylogenetics; Cyprinidae; Fishery","authors":[{"name":"Wei Dong","is_ca":false},{"name":"Bin Wang","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Eric H. C. McKenzie","is_ca":false},{"name":"Huzefa A. Raja","is_ca":false},{"name":"Kazuaki Tanaka","is_ca":false},{"name":"Mohamed A. Abdel‐Wahab","is_ca":false},{"name":"Faten A. Abdel-Aziz","is_ca":false},{"name":"Mingkwan Doilom","is_ca":false},{"name":"Rungtiwa Phookamsak","is_ca":false},{"name":"Sinang Hongsanan","is_ca":false},{"name":"Dhanushka N. Wanasinghe","is_ca":false},{"name":"Xian-Dong Yu","is_ca":false},{"name":"Gen-Nuo Wang","is_ca":false},{"name":"Hao Yang","is_ca":false},{"name":"Jing Yang","is_ca":false},{"name":"Kasun M. Thambugala","is_ca":false},{"name":"Qing Tian","is_ca":false},{"name":"Zong-Long Luo","is_ca":false},{"name":"Jianbo Yang","is_ca":false},{"name":"Andrew N. Miller","is_ca":false},{"name":"Jacques Fournier","is_ca":false},{"name":"Saranyaphat Boonmee","is_ca":false},{"name":"Dian-Ming Hu","is_ca":false},{"name":"Sarunya Nalumpang","is_ca":false},{"name":"Huang Zhang","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01855936055520418,"gpt":0.1995118231101427,"spread":0.1809524625549385,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007821926,0.0004544504,0.0002096115,0.00127453,0.0006552453,0.0005908182,0.0001819163,0.0001805101,0.005396522],"category_scores_gemma":[0.0001862254,0.00008873281,0.0001257979,0.00168371,0.0001701261,0.0004042592,0.0007035318,0.0001763417,0.001005714],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002305938,"about_ca_system_score_gemma":0.0003161863,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003002498,"about_ca_topic_score_gemma":0.004210417,"domain_scores_codex":[0.9997575,0.0000213408,0.00002893913,0.00007120468,0.00004909088,0.00007187534],"domain_scores_gemma":[0.9998435,0.00001107323,0.00004762419,0.00001410234,0.00003742917,0.00004621736],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.000615811,0.0001501457,0.2457699,0.001630908,0.0001245342,0.003760063,0.001962681,0.001305957,0.2699049,0.002990673,0.004374972,0.4674096],"study_design_scores_gemma":[0.00004885838,0.0004472435,0.7090932,0.0002502648,0.000106985,0.006160983,0.00153991,0.001149229,0.02263006,0.0009558297,0.2575567,0.00006086824],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.93484,0.006406948,0.002653048,0.0001205288,0.00006923514,0.0002207072,0.004965117,0.0002979165,0.05042652],"genre_scores_gemma":[0.9770761,0.002329916,0.003641208,0.00007423496,0.00002863279,0.00006519924,0.003022306,0.000009203316,0.01375324],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005396522,"threshold_uncertainty_score":0.01805311,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2620618906","doi":"10.1007/s13225-017-0381-5","title":"A six-gene phylogenetic overview of Basidiomycota and allied phyla with estimated divergence times of higher taxa and a phyloproteomics perspective","year":2017,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":189,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Royal Ontario Museum","funders":"Thailand Research Fund; Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China","keywords":"Basidiomycota; Biology; Taxon; Phylogenetic tree; Phylum; Ascomycota; Monophyly; Evolutionary biology; Zoology; Botany; Clade; Gene; Genetics","authors":[{"name":"Rui-Lin Zhao","is_ca":false},{"name":"Guojie Li","is_ca":false},{"name":"Santiago Sánchez‐Ramírez","is_ca":true},{"name":"Matt Stata","is_ca":true},{"name":"Zhu‐Liang Yang","is_ca":false},{"name":"Gang Wu","is_ca":false},{"name":"Yucheng Dai","is_ca":false},{"name":"Shuang‐Hui He","is_ca":false},{"name":"Bao‐Kai Cui","is_ca":false},{"name":"Junliang Zhou","is_ca":false},{"name":"Fang Wu","is_ca":false},{"name":"Mao-Qiang He","is_ca":false},{"name":"Jean‐Marc Moncalvo","is_ca":true},{"name":"Kevin D. Hyde","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03645047025826815,"gpt":0.2456969882062842,"spread":0.2092465179480161,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005489829,0.0006453007,0.0006054885,0.003784537,0.00071424,0.0009151284,0.0003519964,0.0003914877,0.00197552],"category_scores_gemma":[0.0005836158,0.0002434372,0.0005924804,0.004232809,0.0002879229,0.001106877,0.0005427558,0.0007461224,0.0008104556],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003643781,"about_ca_system_score_gemma":0.0003104648,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008677685,"about_ca_topic_score_gemma":0.0009759515,"domain_scores_codex":[0.9997311,0.00004709065,0.00002795909,0.00008365708,0.00006043878,0.00004972739],"domain_scores_gemma":[0.9995822,0.00008805017,0.0001136435,0.0000359255,0.0001047676,0.00007534692],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001087191,0.0001135422,0.2070121,0.002135208,0.0004094817,0.001202687,0.001970656,0.005439756,0.4082622,0.00508488,0.001588212,0.365694],"study_design_scores_gemma":[0.00003293496,0.0006164652,0.8483528,0.0004840207,0.000533822,0.004941189,0.002278714,0.02077655,0.02450623,0.006746534,0.09059366,0.0001372285],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8720776,0.03296799,0.07913183,0.0004046691,0.00006874394,0.0001198867,0.00460099,0.0005643665,0.01006397],"genre_scores_gemma":[0.8638998,0.01433633,0.109816,0.0001187785,0.00005131495,0.0001086669,0.009248803,0.0001306303,0.002289702],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003784537,"threshold_uncertainty_score":0.006608725,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2536941693","doi":"10.1007/s13225-016-0375-8","title":"One hundred noteworthy boletes from China","year":2016,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":184,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Youth Innovation Promotion Association of the Chinese Academy of Sciences; Ministry of Science and Technology of the People's Republic of China; Natural Science Foundation of Yunnan Province; National Natural Science Foundation of China","keywords":"Holarctic; Biology; Clade; Phylogenetic tree; Zoology; China; Ecology; Genus; Geography; Archaeology","authors":[{"name":"Gang Wu","is_ca":false},{"name":"Yan-Chun Li","is_ca":false},{"name":"Xue-Tai Zhu","is_ca":false},{"name":"Kuan Zhao","is_ca":false},{"name":"Lihong Han","is_ca":false},{"name":"Yangyang Cui","is_ca":false},{"name":"Fang Li","is_ca":false},{"name":"Jianping Xu","is_ca":true},{"name":"Zhu L. Yang","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01598755091346832,"gpt":0.171757331144142,"spread":0.1557697802306737,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002073041,0.0005714325,0.0005458978,0.005268074,0.00166599,0.00121647,0.0003753613,0.0002744473,0.005529794],"category_scores_gemma":[0.0002949287,0.0002645905,0.0003683396,0.007720068,0.0004698058,0.0004670439,0.001168113,0.0004110509,0.0009014824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007570371,"about_ca_system_score_gemma":0.0008293904,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005365736,"about_ca_topic_score_gemma":0.01203395,"domain_scores_codex":[0.999778,0.0000129219,0.00002913965,0.00005409639,0.00006306217,0.00006291068],"domain_scores_gemma":[0.99984,0.00001441813,0.00005516419,0.00001697349,0.00002114283,0.00005227978],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.001222427,0.0001927665,0.3981005,0.002810505,0.0003719082,0.008112011,0.01238402,0.0004231256,0.05907657,0.002464334,0.007842021,0.5069999],"study_design_scores_gemma":[0.00005237034,0.0001148978,0.9093146,0.000107662,0.0001537633,0.002621764,0.002433677,0.000124666,0.001506569,0.00041207,0.08312555,0.00003244011],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9589944,0.01154547,0.0007623234,0.0002153013,0.0001447578,0.0001448559,0.003701195,0.0001551834,0.02433653],"genre_scores_gemma":[0.969286,0.005954689,0.001665133,0.0002911888,0.000119847,0.000124461,0.007831133,0.00003922975,0.01468835],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005529794,"threshold_uncertainty_score":0.01849902,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2028724578","doi":"10.1007/s13225-013-0259-0","title":"Molecular phylogeny, morphology, pigment chemistry and ecology in Hygrophoraceae (Agaricales)","year":2013,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":157,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada; Royal Ontario Museum","funders":"State University of New York Cortland; U.S. Forest Service; Natural England; Scottish Natural Heritage; International Institute of Tropical Forestry; State University of New York; Department for Environment, Food and Rural Affairs, UK Government; U.S. Department of Agriculture; University of Tennessee, Knoxville; National Geographic Society; National Science Foundation","keywords":"Subgenus; Biology; Subfamily; Genus; Zoology; Molecular phylogenetics; Agaricales; Phylogenetics; Morphology (biology); Clade; Systematics; Tribe; Taxonomy (biology); Ecology; Botany; Evolutionary biology; Anthropology; Gene","authors":[{"name":"D. Jean Lodge","is_ca":false},{"name":"Mahajabeen Padamsee","is_ca":false},{"name":"P. Brandon Matheny","is_ca":false},{"name":"M. Catherine Aime","is_ca":false},{"name":"Sharon A. Cantrell","is_ca":false},{"name":"David Boertmann","is_ca":false},{"name":"Alexander E. Kovalenko","is_ca":false},{"name":"Alfredo Vizzini","is_ca":false},{"name":"Bryn T. M. Dentinger","is_ca":false},{"name":"Paul M. Kirk","is_ca":false},{"name":"A. Martyn Ainsworth","is_ca":false},{"name":"Jean‐Marc Moncalvo","is_ca":true},{"name":"Rytas Vilgalys","is_ca":false},{"name":"Ellen Larsson","is_ca":false},{"name":"Robert Lücking","is_ca":false},{"name":"Gareth Griffith","is_ca":false},{"name":"Matthew E. Smith","is_ca":false},{"name":"Lorelei L. Norvell","is_ca":false},{"name":"Dennis E. Desjardin","is_ca":false},{"name":"Scott A. Redhead","is_ca":true},{"name":"Clark L. Ovrebo","is_ca":false},{"name":"Edgar B. Lickey","is_ca":false},{"name":"Enrico Ercole","is_ca":false},{"name":"Karen W. Hughes","is_ca":false},{"name":"Régis Courtecuisse","is_ca":false},{"name":"Anthony Young","is_ca":false},{"name":"Manfred Binder","is_ca":false},{"name":"Andrew M. Minnis","is_ca":false},{"name":"Daniel L. Lindner","is_ca":false},{"name":"Beatriz Ortiz-Santana","is_ca":false},{"name":"J.R. Haight","is_ca":false},{"name":"Thomas Læssøe","is_ca":false},{"name":"Timothy J. Baroni","is_ca":false},{"name":"József Geml","is_ca":false},{"name":"Tsutomu Hattori","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007098716410564566,"gpt":0.1737583141972971,"spread":0.1666595977867326,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001671636,0.0003030387,0.0001771558,0.001042333,0.0002926005,0.0004411211,0.0001844739,0.0001639089,0.00111788],"category_scores_gemma":[0.0003603012,0.0001079705,0.0002216164,0.000801241,0.0002057817,0.000218042,0.0002945511,0.0003156469,0.0003472513],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001765725,"about_ca_system_score_gemma":0.0002049287,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001029078,"about_ca_topic_score_gemma":0.001434268,"domain_scores_codex":[0.9999257,0.00001420801,0.000009492269,0.00002034223,0.00001559745,0.00001455056],"domain_scores_gemma":[0.9997699,0.00005435021,0.00006140264,0.00002497897,0.0000540232,0.0000354055],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003002638,0.00005650831,0.07078612,0.000156915,0.0000517505,0.0003902878,0.0006959807,0.0006655983,0.8523418,0.0005564971,0.0001014325,0.073897],"study_design_scores_gemma":[0.00003479632,0.0002286777,0.9395573,0.00008068374,0.000104977,0.002215058,0.0005666354,0.002340826,0.03973879,0.0005342151,0.0145711,0.00002688341],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949008,0.0006498136,0.002423097,0.00004372875,0.000005739882,0.00001861731,0.0006553654,0.00004074382,0.001262125],"genre_scores_gemma":[0.9909245,0.0004828396,0.004724619,0.00002362636,0.0000084188,0.00002737717,0.002523186,0.00001341428,0.00127201],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00111788,"threshold_uncertainty_score":0.003739715,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1973932940","doi":"10.1007/s13225-011-0110-4","title":"Characterization of fungal pathogens associated with grapevine trunk diseases in Arkansas and Missouri","year":2011,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":153,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"University of California, Davis","keywords":"Botryosphaeria; Biology; Botryosphaeria dothidea; Lasiodiplodia theobromae; Botany; Pestalotiopsis; Vineyard; Phomopsis; Canker; Horticulture","authors":[{"name":"F. Peduto","is_ca":false},{"name":"R. Keith Striegler","is_ca":false},{"name":"K. E. Urrea-Romero","is_ca":false},{"name":"J. C. Rupe","is_ca":false},{"name":"R. D. Cartwright","is_ca":false},{"name":"W. D. Gubler","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01358969548563763,"gpt":0.1754038931990913,"spread":0.1618141977134537,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001415927,0.0001467515,0.0001582218,0.001211242,0.0005931898,0.0005996224,0.0001638525,0.0001700567,0.0004895254],"category_scores_gemma":[0.0002303226,0.0001208097,0.0001489836,0.0008826156,0.0001413776,0.0001039248,0.0003303772,0.0001806779,0.0001239863],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003919409,"about_ca_system_score_gemma":0.0004096864,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04663268,"about_ca_topic_score_gemma":0.1010445,"domain_scores_codex":[0.9998558,0.0000118859,0.00002108324,0.0000411693,0.00003606882,0.00003391918],"domain_scores_gemma":[0.9996705,0.00004123939,0.0001097632,0.0000148884,0.00008592937,0.00007771612],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002228162,0.00007194081,0.8246318,0.00008873503,0.00003830237,0.001305855,0.001347577,0.000218973,0.1595782,0.00004684466,0.0002288187,0.01222008],"study_design_scores_gemma":[0.000001325685,0.0000471007,0.996622,0.00001283328,0.00001417163,0.0003551091,0.0005343537,0.0001066314,0.001272146,0.000005411538,0.001025436,0.000003535383],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99879,0.0002195658,0.00006769302,0.00001892313,0.000002168516,0.000006720951,0.0003770168,0.000008329041,0.000509747],"genre_scores_gemma":[0.9972995,0.0002813201,0.0002425857,0.00002746722,0.00000256974,0.000007102755,0.001490479,0.000002279314,0.0006467845],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04663268,"threshold_uncertainty_score":0.09272248,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3215483547","doi":"10.1007/s13225-021-00493-7","title":"The Global Soil Mycobiome consortium dataset for boosting fungal diversity research","year":2021,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":151,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Saint Mary's University","funders":"Natural Environment Research Council; Eesti Teadusfondi; Novo Nordisk Fonden; Russian Science Foundation; Novo Nordisk; Sight Research UK","keywords":"Edaphic; Biology; Biodiversity; Fungal Diversity; Biogeography; Ecology; Phylogenetic diversity; Macroecology; Mycology; Metadata; Phylogenetic tree; Botany; Soil water","authors":[{"name":"Leho Tedersoo","is_ca":false},{"name":"Vladimir Mikryukov","is_ca":false},{"name":"Sten Anslan","is_ca":false},{"name":"Mohammad Bahram","is_ca":false},{"name":"Abdul Nasir Khalid","is_ca":false},{"name":"Adriana Corrales","is_ca":false},{"name":"Ahto Agan","is_ca":false},{"name":"Aída M. Vasco‐Palacios","is_ca":false},{"name":"Alessandro Saitta","is_ca":false},{"name":"Alexandre Antonelli","is_ca":false},{"name":"Andrea C. Rinaldi","is_ca":false},{"name":"Annemieke Verbeken","is_ca":false},{"name":"Bobby P. Sulistyo","is_ca":false},{"name":"Boris Tamgnoue","is_ca":false},{"name":"Brendan Furneaux","is_ca":false},{"name":"Camila Duarte Ritter","is_ca":false},{"name":"Casper Nyamukondiwa","is_ca":false},{"name":"Cathy Sharp","is_ca":false},{"name":"César Marín","is_ca":false},{"name":"Dong-Qin Dai","is_ca":false},{"name":"Daniyal Gohar","is_ca":false},{"name":"Dipon Sharmah","is_ca":false},{"name":"Elisabeth M. Biersma","is_ca":false},{"name":"Erin K. Cameron","is_ca":true},{"name":"Eske De Crop","is_ca":false},{"name":"Eveli Otsing","is_ca":false},{"name":"Evgeny A. Давыдов","is_ca":false},{"name":"Felipe E. Albornoz","is_ca":false},{"name":"Francis Q. Brearley","is_ca":false},{"name":"Franz Buegger","is_ca":false},{"name":"Genevieve Gates","is_ca":false},{"name":"Geoffrey Zahn","is_ca":false},{"name":"Gregory Bonito","is_ca":false},{"name":"Indrek Hiiesalu","is_ca":false},{"name":"Inga Hiiesalu","is_ca":false},{"name":"Irma Zettur","is_ca":false},{"name":"Isabel C. Barrio","is_ca":false},{"name":"Jaan Pärn","is_ca":false},{"name":"Jacob Heilmann‐Clausen","is_ca":false},{"name":"Jelena Ankuda","is_ca":false},{"name":"John Y. Kupagme","is_ca":false},{"name":"Joosep Sarapuu","is_ca":false},{"name":"Jose G. Maciá‐Vicente","is_ca":false},{"name":"Joseph Djeugap Fovo","is_ca":false},{"name":"József Geml","is_ca":false},{"name":"Juha M. Alatalo","is_ca":false},{"name":"Julieta Alvarez‐Manjarrez","is_ca":false},{"name":"Jutamart Monkai","is_ca":false},{"name":"Kadri Põldmaa","is_ca":false},{"name":"Kadri Runnel","is_ca":false},{"name":"Kalev Adamson","is_ca":false},{"name":"Kari Anne Bråthen","is_ca":false},{"name":"Karin Pritsch","is_ca":false},{"name":"Kassim I. Tchan","is_ca":false},{"name":"Kęstutis Armolaitis","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Kevin K. Newsham","is_ca":false},{"name":"Kristel Panksep","is_ca":false},{"name":"Lateef A. Adebola","is_ca":false},{"name":"Louis J. Lamit","is_ca":false},{"name":"Malka Saba","is_ca":false},{"name":"Marcela Eugênia da Silva Cáceres","is_ca":false},{"name":"Maria Tuomi","is_ca":false},{"name":"Marieka Gryzenhout","is_ca":false},{"name":"Marijn Bauters","is_ca":false},{"name":"Miklós Bálint","is_ca":false},{"name":"Nalin N. Wijayawardene","is_ca":false},{"name":"Niloufar Hagh‐Doust","is_ca":false},{"name":"Nourou S. Yorou","is_ca":false},{"name":"Olavi Kurina","is_ca":false},{"name":"Peter E. Mortimer","is_ca":false},{"name":"Peter Meidl","is_ca":false},{"name":"R. Henrik Nilsson","is_ca":false},{"name":"Rasmus Puusepp","is_ca":false},{"name":"Rebeca Casique-Valdés","is_ca":false},{"name":"Rein Drenkhan","is_ca":false},{"name":"Roberto Garibay‐Orijel","is_ca":false},{"name":"Roberto Godoy","is_ca":false},{"name":"Saleh Alfarraj","is_ca":false},{"name":"Saleh Rahimlou","is_ca":false},{"name":"Sergei Põlme","is_ca":false},{"name":"Sergey V. Dudov","is_ca":false},{"name":"Sunil Mundra","is_ca":false},{"name":"Talaat Ahmed","is_ca":false},{"name":"Tarquin Netherway","is_ca":false},{"name":"Terry W. Henkel","is_ca":false},{"name":"Tomas Roslin","is_ca":false},{"name":"Vladimir E. Fedosov","is_ca":false},{"name":"В. Г. Онипченко","is_ca":false},{"name":"W. A. Erandi Yasanthika","is_ca":false},{"name":"Young Woon Lim","is_ca":false},{"name":"Meike Piepenbring","is_ca":false},{"name":"Dārta Kļaviņa","is_ca":false},{"name":"Urmas Kõljalg","is_ca":false},{"name":"Kessy Abarenkov","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08512912443112818,"gpt":0.3012397723639873,"spread":0.2161106479328591,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001626377,0.001299871,0.001319599,0.004274931,0.000732578,0.001714237,0.001845234,0.001499375,0.01734273],"category_scores_gemma":[0.006028511,0.0003533039,0.001007182,0.007253378,0.0003465364,0.00122776,0.002635373,0.001385963,0.01525008],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008971457,"about_ca_system_score_gemma":0.001859156,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01306856,"about_ca_topic_score_gemma":0.01933813,"domain_scores_codex":[0.9986473,0.0002439427,0.0001585914,0.0004228802,0.0003195116,0.000207833],"domain_scores_gemma":[0.997872,0.000404135,0.0004028755,0.0004465143,0.0005598157,0.0003146884],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003678801,0.00009472456,0.02787431,0.003711143,0.0003818384,0.0002978037,0.0003165182,0.002147868,0.004689879,0.003335556,0.93035,0.02643243],"study_design_scores_gemma":[0.0002260275,0.00003312798,0.03726495,0.0004971844,0.0001039144,0.000146989,0.0002027816,0.001235165,0.001167289,0.002335656,0.9567351,0.00005190171],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.001703839,0.0002619746,0.0004349388,0.00007448404,0.00002622167,0.00001665159,0.9964503,0.0003251645,0.0007063195],"genre_scores_gemma":[0.002190547,0.00008823103,0.001345807,0.0000349844,0.000008069003,0.00006500204,0.9959907,0.00007192044,0.0002047286],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.01734273,"threshold_uncertainty_score":0.05801719,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2109296318","doi":"10.1007/s13225-014-0291-8","title":"Improving ITS sequence data for identification of plant pathogenic fungi","year":2014,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":148,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Austrian Centre of Industrial Biotechnology; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Vetenskapsrådet; National Science Foundation; Government of Canada; Ontario Genomics Institute; Genome Canada","keywords":"Biology; Mycology; Identification (biology); Sequence (biology); Plant biology; Computational biology; Botany; Genetics","authors":[{"name":"R. Henrik Nilsson","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Julia Pawłowska","is_ca":false},{"name":"Martin Ryberg","is_ca":false},{"name":"Leho Tedersoo","is_ca":false},{"name":"Anders Bjørnsgard","is_ca":false},{"name":"Siti Aisyah Alias","is_ca":false},{"name":"Artur Alves","is_ca":false},{"name":"Cajsa Lisa Anderson","is_ca":false},{"name":"Alexandre Antonelli","is_ca":false},{"name":"A. Elizabeth Arnold","is_ca":false},{"name":"Barbara Doreen Bahnmann","is_ca":false},{"name":"Mohammad Bahram","is_ca":false},{"name":"Johan Bengtsson‐Palme","is_ca":false},{"name":"Anna Berlin","is_ca":false},{"name":"Sara Branco","is_ca":false},{"name":"Putarak Chomnunti","is_ca":false},{"name":"Asha J. Dissanayake","is_ca":false},{"name":"Rein Drenkhan","is_ca":false},{"name":"Hanna Friberg","is_ca":false},{"name":"Tobias Guldberg Frøslev","is_ca":false},{"name":"Bettina Halwachs","is_ca":false},{"name":"Martin Hartmann","is_ca":false},{"name":"B. Henricot","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"Ari Jumpponen","is_ca":false},{"name":"Håvard Kauserud","is_ca":false},{"name":"Sonja Koskela","is_ca":false},{"name":"Tomasz Kulik","is_ca":false},{"name":"Kare Liimatainen","is_ca":false},{"name":"Björn D. Lindahl","is_ca":false},{"name":"Daniel L. Lindner","is_ca":false},{"name":"Jian‐Kui Liu","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Dimuthu S. Manamgoda","is_ca":false},{"name":"Svante Martinsson","is_ca":false},{"name":"Maria Alice Neves","is_ca":false},{"name":"Tuula Niskanen","is_ca":false},{"name":"Stephan Nylinder","is_ca":false},{"name":"Olinto Liparini Pereira","is_ca":false},{"name":"Danilo Batista Pinho","is_ca":false},{"name":"Teresita M. Porter","is_ca":true},{"name":"Valentin Queloz","is_ca":false},{"name":"Taavi Riit","is_ca":false},{"name":"Marisol Sánchez‐García","is_ca":false},{"name":"Filipe Sousa","is_ca":false},{"name":"Emil Stefańczyk","is_ca":false},{"name":"Mariusz Tadych","is_ca":false},{"name":"Susumu Takamatsu","is_ca":false},{"name":"Qing Tian","is_ca":false},{"name":"Dhanushka Udayanga","is_ca":false},{"name":"Martin Unterseher","is_ca":false},{"name":"Zheng Wang","is_ca":false},{"name":"Saowanee Wikee","is_ca":false},{"name":"Jiye Yan","is_ca":false},{"name":"Ellen Larsson","is_ca":false},{"name":"Karl-Henrik Larsson","is_ca":false},{"name":"Urmas Kõljalg","is_ca":false},{"name":"Kessy Abarenkov","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03764576999973513,"gpt":0.244844584533407,"spread":0.2071988145336718,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006424099,0.001103517,0.001666663,0.004692349,0.001324676,0.003172815,0.00131073,0.001407746,0.004693409],"category_scores_gemma":[0.01461582,0.000527059,0.00142198,0.007266561,0.0004819894,0.002119579,0.001606117,0.003071463,0.008315637],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008110679,"about_ca_system_score_gemma":0.002290443,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003082943,"about_ca_topic_score_gemma":0.005175255,"domain_scores_codex":[0.9955712,0.001246102,0.0008116951,0.0009190454,0.001162503,0.0002895565],"domain_scores_gemma":[0.9888555,0.002376975,0.001448461,0.002273709,0.004394783,0.0006504465],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001671907,0.0003751247,0.02222193,0.005029467,0.0002315657,0.001403322,0.002295777,0.002469839,0.7360222,0.002125514,0.01640316,0.2097503],"study_design_scores_gemma":[0.0002127357,0.0007381233,0.09249592,0.002329469,0.001009239,0.004633471,0.002512066,0.0136808,0.2406648,0.004707549,0.6367161,0.0002997244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.5550175,0.02606479,0.2436312,0.004740086,0.003363921,0.001012524,0.1338083,0.006701412,0.02566029],"genre_scores_gemma":[0.2490863,0.01136354,0.4478513,0.001319875,0.0005206528,0.0005759288,0.2813163,0.002066702,0.00589951],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.006424099,"threshold_uncertainty_score":0.03397429,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2304950966","doi":"10.1007/s13225-016-0357-x","title":"Towards standardizing taxonomic ranks using divergence times – a case study for reconstruction of the Agaricus taxonomic system","year":2016,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":134,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Royal Ontario Museum","funders":"National Natural Science Foundation of China","keywords":"Subgenus; Biology; Agaricus; Clade; Phylogenetic tree; Taxonomy (biology); Taxonomic rank; Phylogenetics; Taxon; Evolutionary biology; Agaricales; Monophyly; Zoology; Mushroom; Botany; Genetics; Gene","authors":[{"name":"Rui-Lin Zhao","is_ca":false},{"name":"Junliang Zhou","is_ca":false},{"name":"Jie Chen","is_ca":false},{"name":"Simona Margaritescu","is_ca":true},{"name":"Santiago Sánchez‐Ramírez","is_ca":true},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Philippe Callac","is_ca":false},{"name":"Luis A. Parra","is_ca":false},{"name":"Guojie Li","is_ca":false},{"name":"Jean‐Marc Moncalvo","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03638810634801903,"gpt":0.2154283107899105,"spread":0.1790402044418914,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01739834,0.001017082,0.001056268,0.006261289,0.001581385,0.00460284,0.001881036,0.001020374,0.001048064],"category_scores_gemma":[0.04269522,0.0004092196,0.0009104069,0.007211296,0.001600211,0.00296302,0.00282972,0.002693645,0.0007006116],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001058614,"about_ca_system_score_gemma":0.001213202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002285818,"about_ca_topic_score_gemma":0.002091133,"domain_scores_codex":[0.9918674,0.004971617,0.0007078233,0.001210669,0.0009459801,0.0002965529],"domain_scores_gemma":[0.9769506,0.0137035,0.002397969,0.003098804,0.003076205,0.000772872],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0005724322,0.0002571235,0.2426213,0.0008750384,0.0003684687,0.0016684,0.01527309,0.03091237,0.04757161,0.02611864,0.00245746,0.6313041],"study_design_scores_gemma":[0.0001270154,0.0007260047,0.2651041,0.001149193,0.000522615,0.003675552,0.01770254,0.5260862,0.02882177,0.09143225,0.0640715,0.0005811983],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.5597118,0.002540095,0.4308328,0.0007422095,0.00009096313,0.0001979178,0.0005819317,0.000862575,0.004439722],"genre_scores_gemma":[0.5692954,0.0005732599,0.4281286,0.00006570044,0.00004486987,0.00009473964,0.00111088,0.0003470512,0.0003394501],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.01739834,"threshold_uncertainty_score":0.09201235,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2042351698","doi":"10.1007/s13225-011-0147-4","title":"Revision of lignicolous Tubeufiaceae based on morphological reexamination and phylogenetic analysis","year":2011,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":118,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Ascocarp; Biology; Dothideomycetes; Sister group; Phylogenetic tree; Botany; Ascospore; Taxon; Ascomycota; Taxonomy (biology); Evolutionary biology; Clade; Genetics","authors":[{"name":"Saranyaphat Boonmee","is_ca":false},{"name":"Ying Zhang","is_ca":false},{"name":"Putarak Chomnunti","is_ca":false},{"name":"Ekachai Chukeatirote","is_ca":false},{"name":"Clement K. M. Tsui","is_ca":true},{"name":"Ali H. Bahkali","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02291378969675953,"gpt":0.2139420050473625,"spread":0.191028215350603,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009753341,0.001079206,0.0007571151,0.004851244,0.001915772,0.001805278,0.001040695,0.0008026814,0.002768393],"category_scores_gemma":[0.002175872,0.0001610807,0.0006904681,0.002325961,0.001900599,0.002326616,0.001195841,0.001265003,0.0007664695],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001545333,"about_ca_system_score_gemma":0.001500156,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004886189,"about_ca_topic_score_gemma":0.004502719,"domain_scores_codex":[0.9995056,0.0001314904,0.00005130201,0.0001144174,0.00008205211,0.0001149462],"domain_scores_gemma":[0.9992833,0.0001340539,0.0001102178,0.00009903631,0.0002548687,0.0001186227],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.000904427,0.0001648829,0.04417751,0.002139973,0.000217888,0.003826872,0.009782,0.003117703,0.07314215,0.01011879,0.003036448,0.8493714],"study_design_scores_gemma":[0.00005136768,0.0007308152,0.2138028,0.001908351,0.0003924394,0.009697882,0.006981552,0.00454088,0.006284086,0.005520806,0.7499287,0.0001603844],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8107457,0.1057583,0.05217973,0.00211751,0.001503407,0.0003261113,0.001092438,0.001783221,0.02449357],"genre_scores_gemma":[0.9221582,0.02633148,0.04063928,0.0006858673,0.0007534564,0.0001150838,0.00282037,0.0002251384,0.006271057],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004886189,"threshold_uncertainty_score":0.01121229,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2806138958","doi":"10.1007/s13225-018-0403-y","title":"Phylogeny, ecology and taxonomy of systemic pathogens and their relatives in Ajellomycetaceae (Onygenales): Blastomyces, Emergomyces, Emmonsia, Emmonsiellopsis","year":2018,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Guizhou Medical University; China Scholarship Council","keywords":"Biology; Blastomyces dermatitidis; Blastomyces; Phylogenetics; Histoplasma; Microbiology; Zoology; Genetics; Blastomycosis; Histoplasma capsulatum; Histoplasmosis; Gene","authors":[{"name":"Yanping Jiang","is_ca":false},{"name":"Karolina Dukik","is_ca":false},{"name":"José F. Muñoz","is_ca":false},{"name":"Lynne Sigler","is_ca":true},{"name":"Ilan S. Schwartz","is_ca":true},{"name":"Nelesh P. Govender","is_ca":false},{"name":"Chris Kenyon","is_ca":false},{"name":"Peiying Feng","is_ca":false},{"name":"Bert Gerrits van den Ende","is_ca":false},{"name":"J. Benjamin Stielow","is_ca":false},{"name":"Alberto M. Stchigel","is_ca":false},{"name":"Hongguang Lü","is_ca":false},{"name":"Sybren de Hoog","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02580651201474478,"gpt":0.223834127563545,"spread":0.1980276155488002,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002029134,0.0003909278,0.0002826241,0.001179158,0.0004612709,0.0006668806,0.0001940397,0.0002985618,0.0007535341],"category_scores_gemma":[0.0003602633,0.0001204923,0.0001686746,0.001053023,0.0002633395,0.0003825083,0.0005249702,0.0003237301,0.0003364147],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000173352,"about_ca_system_score_gemma":0.0003155741,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001474543,"about_ca_topic_score_gemma":0.001222035,"domain_scores_codex":[0.9998254,0.00002358385,0.00002665251,0.0000592435,0.00002263644,0.00004249739],"domain_scores_gemma":[0.9997168,0.00003845989,0.00008932425,0.00001723185,0.00007044693,0.00006760319],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008106031,0.0001537314,0.3220626,0.0003127575,0.00006570324,0.0008670979,0.002321355,0.0004320004,0.6229831,0.0003099065,0.0001420602,0.04953907],"study_design_scores_gemma":[0.00002150261,0.0003323515,0.9837223,0.00005479343,0.00003682244,0.001256925,0.001394689,0.0004850294,0.005852545,0.000105871,0.006720857,0.00001633478],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972432,0.0009544688,0.0005198761,0.0000248375,0.000004968509,0.00002550417,0.0002725849,0.00001665791,0.0009379567],"genre_scores_gemma":[0.9943504,0.001068152,0.002191406,0.00004212119,0.00001484104,0.00003948008,0.001184068,0.00001084147,0.001098832],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001474543,"threshold_uncertainty_score":0.002931952,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4393004100","doi":"10.1007/s13225-023-00532-5","title":"Current trends, limitations and future research in the fungi?","year":2024,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":109,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Botany, Chinese Academy of Sciences; Kunming Institute of Botany, Chinese Academy of Sciences; Fundação para a Ciência e a Tecnologia; Ministério da Ciência, Tecnologia e Ensino Superior; Institute of Population and Public Health; National Research Council of Thailand; Chinese Academy of Sciences; Centro de Estudos Ambientais e Marinhos, Universidade de Aveiro; Universidade de Aveiro; King Saud University; Ministerstvo Školství, Mládeže a Tělovýchovy","keywords":"Mycology; Biology; Phylogenomics; Field (mathematics); Ecology; Data science; Engineering ethics; Computer science; Engineering; Phylogenetics; Botany","authors":[{"name":"Kevin D. Hyde","is_ca":false},{"name":"Petr Baldrián","is_ca":false},{"name":"Yanpeng Chen","is_ca":false},{"name":"K. W. Thilini Chethana","is_ca":false},{"name":"Sybren de Hoog","is_ca":false},{"name":"Mingkwan Doilom","is_ca":false},{"name":"Antônio Roberto Gomes de Farias","is_ca":false},{"name":"Micael F. M. Gonçalves","is_ca":false},{"name":"Didsanutda Gonkhom","is_ca":false},{"name":"Heng Gui","is_ca":false},{"name":"Sandra Hilário","is_ca":false},{"name":"Yuwei Hu","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"Sabin Khyaju","is_ca":false},{"name":"Paul M. Kirk","is_ca":false},{"name":"Petr Kohout","is_ca":false},{"name":"Thatsanee Luangharn","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Ishara S. Manawasinghe","is_ca":false},{"name":"Peter E. Mortimer","is_ca":false},{"name":"Allen Grace T. Niego","is_ca":false},{"name":"Monthien Phonemany","is_ca":false},{"name":"Birthe Sandargo","is_ca":false},{"name":"Indunil C. Senanayake","is_ca":false},{"name":"Marc Stadler","is_ca":false},{"name":"Frank Surup","is_ca":false},{"name":"Naritsada Thongklang","is_ca":false},{"name":"Dhanushka N. Wanasinghe","is_ca":false},{"name":"Ali H. Bahkali","is_ca":false},{"name":"Arttapon Walker","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1091135136979812,"gpt":0.3009123063228214,"spread":0.1917987926248402,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.05040537,0.001110775,0.002433309,0.004622617,0.001615091,0.008669767,0.00408106,0.006771018,0.01391823],"category_scores_gemma":[0.05958516,0.0005273691,0.002149541,0.005882145,0.006783706,0.0195212,0.004442294,0.007469855,0.003642937],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005731279,"about_ca_system_score_gemma":0.01603265,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007666107,"about_ca_topic_score_gemma":0.006766161,"domain_scores_codex":[0.9873153,0.006017449,0.001318945,0.001917789,0.002610639,0.0008198438],"domain_scores_gemma":[0.8445291,0.1173496,0.004641252,0.003981264,0.02340529,0.006093406],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006114339,0.0002566207,0.005767576,0.03086918,0.0003590122,0.0002960553,0.001346108,0.001079877,0.001110465,0.07293695,0.1072537,0.7781129],"study_design_scores_gemma":[0.00005518357,0.0003513837,0.007684036,0.03967177,0.0003371855,0.0007421977,0.0063519,0.001275734,0.0007210427,0.1480488,0.7946133,0.000147493],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00121744,0.8293447,0.0014037,0.1616324,0.003436033,0.00002278395,0.0002284432,0.00004948541,0.002664996],"genre_scores_gemma":[0.02667965,0.9105134,0.008119601,0.04428144,0.008302411,0.0001449578,0.000477319,0.00006724302,0.001413924],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.05040537,"threshold_uncertainty_score":0.2665722,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1617612940","doi":"10.1007/s13225-015-0345-6","title":"Phylogenetic insights resolve Dacampiaceae (Pleosporales) as polyphyletic: Didymocyrtis (Pleosporales, Phaeosphaeriaceae) with Phoma-like anamorphs resurrected and segregated from Polycoccum (Trypetheliales, Polycoccaceae fam. nov.)","year":2015,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":108,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canadian Museum of Nature","funders":"","keywords":"Polyphyly; Biology; Phoma; Dothideomycetes; Botany; Genus; Pycnidium; Conidium; Evolutionary biology; Phylogenetic tree; Genetics; Clade","authors":[{"name":"Damien Ertz","is_ca":false},{"name":"Paul Diederich","is_ca":false},{"name":"James D. Lawrey","is_ca":false},{"name":"Franz Berger","is_ca":false},{"name":"Colin Freebury","is_ca":true},{"name":"B. J. Coppins","is_ca":false},{"name":"Alain Gardiennet","is_ca":false},{"name":"Josef Hafellner","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02061189731318834,"gpt":0.1911687533382426,"spread":0.1705568560250542,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002138353,0.000360731,0.0002766631,0.001327311,0.0005457358,0.0007862164,0.0001317662,0.0002290526,0.002223962],"category_scores_gemma":[0.0004488572,0.0001243269,0.0002294236,0.001227274,0.0002178429,0.0004334314,0.0005363684,0.0004528351,0.0007664034],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002871628,"about_ca_system_score_gemma":0.00026163,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001070614,"about_ca_topic_score_gemma":0.002600096,"domain_scores_codex":[0.9998904,0.00001792448,0.00001038027,0.00003813288,0.00001315075,0.00002994631],"domain_scores_gemma":[0.9997167,0.00005027753,0.00006532403,0.00002515022,0.00005663398,0.00008594899],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006064125,0.0001364707,0.1778641,0.000907021,0.0002263667,0.001270926,0.004452538,0.001186963,0.590857,0.001706659,0.001122281,0.2196632],"study_design_scores_gemma":[0.00002834803,0.0003021224,0.920978,0.0001723527,0.0002042361,0.002975813,0.002708343,0.002689834,0.006726727,0.0006155165,0.06256691,0.00003178616],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9841144,0.004425909,0.00466471,0.0001705418,0.00002515291,0.00003412008,0.001200999,0.0001645099,0.005199814],"genre_scores_gemma":[0.9849504,0.00131377,0.009110014,0.0001074176,0.00002398177,0.00001696839,0.002814606,0.00003133408,0.001631621],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002223962,"threshold_uncertainty_score":0.007439911,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2035092917","doi":"10.1007/s13225-011-0104-2","title":"Phylogenetic relationships of five genera of Xylariales and Rosasphaeria gen. nov. (Hypocreales)","year":2011,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":96,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Crohn's and Colitis Foundation of Canada","keywords":"Hypocreales; Biology; Phylogenetic tree; Type species; Genus; Botany; PhyloCode; Phylogenetics; Zoology; Evolutionary biology; Ascomycota; Cladistics; Genetics; Gene","authors":[{"name":"Walter M. Jaklitsch","is_ca":false},{"name":"Hermann Voglmayr","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03876826994736631,"gpt":0.2047617480017865,"spread":0.1659934780544202,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002268389,0.0004541228,0.0002539449,0.001448097,0.0006023208,0.0005299359,0.0003766111,0.0003690175,0.00166001],"category_scores_gemma":[0.000362846,0.0001424922,0.0002593407,0.0006766333,0.0003393922,0.0004357387,0.0006153663,0.0003811535,0.0008154134],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000278598,"about_ca_system_score_gemma":0.0002816138,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001241269,"about_ca_topic_score_gemma":0.002023329,"domain_scores_codex":[0.9998561,0.00002393369,0.00001410617,0.00004730739,0.00002706363,0.00003148522],"domain_scores_gemma":[0.999708,0.00006742328,0.00009203277,0.00002593137,0.00005648317,0.00005015124],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009688746,0.0002661547,0.3019534,0.0008745504,0.0002499784,0.001797784,0.005005589,0.0009017432,0.4210019,0.0009167606,0.001094932,0.2649683],"study_design_scores_gemma":[0.0000304094,0.0004484098,0.9622647,0.0001671483,0.0001499067,0.003993285,0.001812102,0.001358274,0.004572779,0.0003203189,0.024852,0.00003070872],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913361,0.002027954,0.002418177,0.00007139113,0.00002637807,0.00005784192,0.0007272002,0.00009187965,0.003243085],"genre_scores_gemma":[0.9868611,0.0008271203,0.006533467,0.000121921,0.000023611,0.00006117072,0.003969186,0.00001693538,0.001585425],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00166001,"threshold_uncertainty_score":0.005553305,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2086924055","doi":"10.1007/s13225-014-0300-y","title":"Stream-dwelling fungal decomposer communities along a gradient of eutrophication unraveled by 454 pyrosequencing","year":2014,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Environmental DNA in Biodiversity Studies","field":"Environmental Science","cited_by":91,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Allison University","funders":"European Regional Development Fund; Programa Operacional Temático Factores de Competitividade","keywords":"Decomposer; Pyrosequencing; Hyphomycetes; Biology; Ecology; Chytridiomycota; Biodiversity; Ascomycota; Ecosystem","authors":[{"name":"Sofia Duarte","is_ca":false},{"name":"Feli× Bärlocher","is_ca":true},{"name":"José Trabulo","is_ca":false},{"name":"Fernanda Cássio","is_ca":false},{"name":"Cláudia Pascoal","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01467877016901955,"gpt":0.1946658758476691,"spread":0.1799871056786496,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004490074,0.0004338949,0.000601246,0.0008625559,0.0004952689,0.0009650651,0.0001684915,0.0003560043,0.0005216977],"category_scores_gemma":[0.0003898149,0.0002336604,0.0005088278,0.001010678,0.000361603,0.0003595193,0.0004352232,0.0004382826,0.0001446993],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001623768,"about_ca_system_score_gemma":0.000291559,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002727596,"about_ca_topic_score_gemma":0.003159956,"domain_scores_codex":[0.9996414,0.00005189846,0.00002751576,0.0001257176,0.00009828807,0.00005507302],"domain_scores_gemma":[0.9997982,0.00004388311,0.00005588673,0.00000925159,0.00006050593,0.00003215742],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006355717,0.0001217464,0.1667713,0.0002260771,0.0001320827,0.0004280991,0.001484228,0.001334531,0.8141322,0.0001779273,0.0001078867,0.01444829],"study_design_scores_gemma":[0.00001208257,0.0003656517,0.9507926,0.00004018945,0.0001172387,0.0003907613,0.0009240587,0.006613136,0.03896526,0.0002838016,0.001457515,0.00003766406],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980203,0.0001741239,0.001133449,0.000009228324,0.000002713316,0.00001279524,0.0004091344,0.00001215827,0.0002260672],"genre_scores_gemma":[0.9930685,0.0002228451,0.005368643,0.00003182475,0.00000698456,0.00003505032,0.0008186608,0.00001099681,0.0004365525],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002727596,"threshold_uncertainty_score":0.005423367,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2608920092","doi":"","title":"Diversity of fungi associated with the mountain pine beetle, Dendroctonus ponderosae and infested lodgepole pines in British Columbia","year":2006,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of British Columbia","funders":"","keywords":"Dendroctonus; Mountain pine beetle; Pinus contorta; Ophiostoma; Bark beetle; Biology; Botany; Woody plant; Ecology; Abies lasiocarpa; Bark (sound); Fungus","authors":[{"name":"Sang‐Won Lee","is_ca":true},{"name":"Jae Jin Kim","is_ca":false},{"name":"Colette Breuil","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006151321076210748,"gpt":0.1756981065003475,"spread":0.1695467854241368,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002446171,0.0001843276,0.0002327752,0.002753869,0.00176067,0.0008746593,0.0005083476,0.0002497232,0.0008940094],"category_scores_gemma":[0.0004988513,0.0002444532,0.0001141765,0.002447932,0.0006482355,0.0002037772,0.0004934568,0.0002942488,0.0001308792],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003992674,"about_ca_system_score_gemma":0.002909459,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9197548,"about_ca_topic_score_gemma":0.9837606,"domain_scores_codex":[0.9996578,0.00003053654,0.00002012154,0.0000663098,0.0001147728,0.0001105341],"domain_scores_gemma":[0.9991068,0.00007363902,0.0001498027,0.00002195558,0.0003653693,0.0002822788],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001439276,0.00003162173,0.9817004,0.0000448416,0.00005598853,0.0003235756,0.00224276,0.00009214958,0.008653985,0.00007463468,0.0002668831,0.006369282],"study_design_scores_gemma":[9.039276e-7,0.000005493193,0.9986541,0.000006264331,0.000004944277,0.00006528653,0.0009269138,0.0000388017,0.00009468746,0.000004763253,0.0001953937,0.000002495498],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998834,0.0002596964,0.00002322589,0.00001814908,0.000001183156,0.000005141514,0.0003459084,0.000001850516,0.000510889],"genre_scores_gemma":[0.9985983,0.0002935883,0.00006788527,0.00002067402,8.61965e-7,0.000003578956,0.0002920518,0.00000107045,0.0007220074],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0802452,"threshold_uncertainty_score":0.1614355,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3177280576","doi":"10.1007/s13225-021-00475-9","title":"The evolving species concepts used for yeasts: from phenotypes and genomes to speciation networks","year":2021,"lang":"en","type":"review","venue":"Fungal Diversity","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; Biotechnology and Biological Sciences Research Council; Agricultural Research Service; National Institutes of Health; Canadian Institute for Advanced Research; Deutsche Forschungsgemeinschaft; U.S. Department of Agriculture","keywords":"Biology; Genetic algorithm; Phenotype; Evolutionary biology; Genome; Biodiversity; Computational biology; Genetics; Ecology; Gene","authors":[{"name":"Teun Boekhout","is_ca":false},{"name":"M. Catherine Aime","is_ca":false},{"name":"Dominik Begerow","is_ca":false},{"name":"Toni Gabaldón","is_ca":false},{"name":"Joseph Heitman","is_ca":false},{"name":"Martin Kemler","is_ca":false},{"name":"Kantarawee Khayhan","is_ca":false},{"name":"Marc‐André Lachance","is_ca":true},{"name":"Edward J. Louis","is_ca":false},{"name":"Sheng Sun","is_ca":false},{"name":"Duong Vu","is_ca":false},{"name":"Andrey Yurkov","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02983818523899668,"gpt":0.279725069336298,"spread":0.2498868840973014,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001209397,0.001729945,0.002174406,0.005183749,0.0005320333,0.001972993,0.001694678,0.001809767,0.002086101],"category_scores_gemma":[0.001810599,0.0004972286,0.0008487562,0.00442268,0.002343457,0.004068627,0.001283074,0.003260482,0.001606647],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001981324,"about_ca_system_score_gemma":0.001525375,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002697024,"about_ca_topic_score_gemma":0.002135953,"domain_scores_codex":[0.9995523,0.00009620302,0.0000665698,0.0001190427,0.0001397598,0.00002609896],"domain_scores_gemma":[0.9991199,0.0005198419,0.00009227701,0.00003460415,0.0001768574,0.00005638726],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0000574303,0.00005223058,0.0003081094,0.03180909,0.0001529923,0.0002894951,0.0003629721,0.001397382,0.002374029,0.04412572,0.02684857,0.8922219],"study_design_scores_gemma":[0.000007004148,0.0000544674,0.0005846367,0.00410694,0.00008580168,0.000932938,0.0001456556,0.0001800827,0.0005529818,0.01228218,0.9810204,0.000046989],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0000805446,0.9972185,0.001023633,0.0004058869,0.000366738,0.000006976709,0.00002269844,0.00001637412,0.0008586461],"genre_scores_gemma":[0.0008397225,0.9966301,0.001197834,0.0004382237,0.000304554,0.00001726431,0.0000486459,0.00000730964,0.0005163394],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.005183749,"threshold_uncertainty_score":0.01437551,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2092235134","doi":"10.1007/s13225-012-0179-4","title":"Molecular data place the hyphomycetous lichenicolous genus Sclerococcum close to Dactylospora (Eurotiomycetes) and S. parmeliae in Cladophialophora (Chaetothyriales)","year":2012,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":67,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Brandon University","funders":"Division of Environmental Biology","keywords":"Biology; Clade; Genus; Phylogenetic tree; Lineage (genetic); Lichen; Botany; Sister group; New guinea; Zoology; Genetics; Gene","authors":[{"name":"Paul Diederich","is_ca":false},{"name":"Damien Ertz","is_ca":false},{"name":"James D. Lawrey","is_ca":false},{"name":"Masoumeh Sikaroodi","is_ca":false},{"name":"Wendy A. Untereiner","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04460136665554357,"gpt":0.235035637946055,"spread":0.1904342712905114,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008223302,0.0002813052,0.000108552,0.0005764117,0.0001636589,0.0002746316,0.00008433104,0.0001543094,0.00252706],"category_scores_gemma":[0.0002708838,0.00007214734,0.0001461963,0.0003632613,0.0001409214,0.0001374741,0.0001897666,0.0001607034,0.0006038869],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001083092,"about_ca_system_score_gemma":0.0001209491,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008265538,"about_ca_topic_score_gemma":0.001927284,"domain_scores_codex":[0.9999359,0.000009011934,0.000008255907,0.00002096443,0.00001377897,0.00001208071],"domain_scores_gemma":[0.9997585,0.00004000866,0.00009273664,0.00002628982,0.0000313641,0.00005111742],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001709017,0.00005371683,0.1402792,0.0001289538,0.00004951738,0.0005197958,0.0004524793,0.0002756542,0.8204788,0.0002191543,0.0001375265,0.0372343],"study_design_scores_gemma":[0.00001152553,0.0001940157,0.9598807,0.00002828043,0.00005512634,0.00228797,0.0004362379,0.0006299993,0.02710891,0.00005908623,0.009302053,0.000006222359],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948042,0.0003889611,0.001074381,0.00002761523,0.000007290753,0.00001495794,0.0006621994,0.00002966048,0.002990717],"genre_scores_gemma":[0.9960154,0.000231702,0.001565993,0.00002266535,0.000006482829,0.00000886691,0.001290988,0.000004147266,0.0008536542],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00252706,"threshold_uncertainty_score":0.008453846,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2072087764","doi":"10.1007/s13225-011-0128-7","title":"Fifty years of oomycetes—from consolidation to evolutionary and genomic exploration","year":2011,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Oomycete; Biology; Zoospore; Clade; Phylogenetics; Evolutionary biology; Phylum; Genetics; Botany; Gene; Spore","authors":[{"name":"C. André Lévesque","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04438852488853193,"gpt":0.1786239962690665,"spread":0.1342354713805346,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005049037,0.0007191655,0.001333682,0.003147656,0.002251901,0.006768799,0.001127564,0.003239366,0.004900641],"category_scores_gemma":[0.006697627,0.0005584938,0.0006189272,0.004254512,0.0121812,0.01544706,0.006827844,0.006316905,0.001388871],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002620394,"about_ca_system_score_gemma":0.002727521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001501794,"about_ca_topic_score_gemma":0.00123142,"domain_scores_codex":[0.9981219,0.00051029,0.0001734149,0.0005525775,0.0003836931,0.0002580702],"domain_scores_gemma":[0.9946817,0.002404324,0.0004386565,0.0006335083,0.0008201655,0.001021764],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007473568,0.0001771292,0.01041377,0.003391796,0.0001253015,0.001293802,0.01327492,0.0006215572,0.007397703,0.2247041,0.0556119,0.6822407],"study_design_scores_gemma":[0.00001355517,0.000124733,0.008061896,0.001876172,0.00002667313,0.001039896,0.004057731,0.0001810272,0.0008032675,0.07472651,0.9090136,0.00007503814],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.02484781,0.8740745,0.007589369,0.07109714,0.007199614,0.00004458157,0.0004376144,0.0001569416,0.01455242],"genre_scores_gemma":[0.1436475,0.7876568,0.01198455,0.03191304,0.0105427,0.000150625,0.001062011,0.0001992899,0.01284354],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.006768799,"threshold_uncertainty_score":0.02670217,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2469934575","doi":"10.1007/s13225-015-0336-7","title":"Porcini mushrooms (Boletus sect. Boletus) from China","year":2015,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Boletus; Biology; Synonym (taxonomy); Botany; Phylogenetic tree; Agaricales; Mushroom; Agaricus; Taxonomy (biology); Genus; Genetics; Gene","authors":[{"name":"Yangyang Cui","is_ca":false},{"name":"Bang Feng","is_ca":false},{"name":"Gang Wu","is_ca":false},{"name":"Jianping Xu","is_ca":true},{"name":"Zhu L. Yang","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04292820795864073,"gpt":0.2554379703157906,"spread":0.2125097623571499,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001329462,0.0004160588,0.0002657981,0.001581407,0.0005014713,0.0003802815,0.0001505073,0.0001479407,0.0006990053],"category_scores_gemma":[0.0001647869,0.0001366131,0.0002146095,0.002141154,0.0003000883,0.0003241005,0.0005839218,0.0002342618,0.0001002519],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004842629,"about_ca_system_score_gemma":0.0005010355,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007014651,"about_ca_topic_score_gemma":0.01325314,"domain_scores_codex":[0.9999171,0.000005128563,0.00001219293,0.00002317888,0.00002061639,0.00002179536],"domain_scores_gemma":[0.9999098,0.00001061893,0.0000355601,0.000008166595,0.00001624181,0.00001970633],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009563568,0.00009819755,0.3025784,0.001696283,0.0002016634,0.003635487,0.002746632,0.0005884506,0.4763429,0.0004508489,0.0005598977,0.210145],"study_design_scores_gemma":[0.0000258548,0.0001027184,0.980801,0.00004954981,0.0001164095,0.001538626,0.000762738,0.0002151188,0.008952635,0.000103227,0.007316934,0.0000151289],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949804,0.001890754,0.000464415,0.00008971109,0.000009725503,0.00003173171,0.0004467038,0.00001631251,0.00207027],"genre_scores_gemma":[0.9940402,0.002240823,0.001139443,0.0000936445,0.00001184446,0.00002658108,0.001357912,0.000004724879,0.001084768],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007014651,"threshold_uncertainty_score":0.01394767,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2077082524","doi":"10.1007/s13225-012-0166-9","title":"Phylogenetic placement of lichenicolous Phoma species in the Phaeosphaeriaceae (Pleosporales, Dothideomycetes)","year":2012,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Canadian Museum of Nature","funders":"National Science Foundation","keywords":"Dothideomycetes; Phoma; Biology; Botany; Clade; Genus; Lichen; Taxonomy (biology); Ascomycota; Phylogenetic tree; Zoology; Genetics","authors":[{"name":"James D. Lawrey","is_ca":false},{"name":"Paul Diederich","is_ca":false},{"name":"Matthew P. Nelsen","is_ca":false},{"name":"Colin Freebury","is_ca":true},{"name":"Dries Van den Broeck","is_ca":false},{"name":"Masoumeh Sikaroodi","is_ca":false},{"name":"Damien Ertz","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01999265232100675,"gpt":0.2207947985200307,"spread":0.200802146199024,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000289501,0.0001994965,0.0002034728,0.001500535,0.000516557,0.0006296292,0.0001956062,0.0002847589,0.0007659387],"category_scores_gemma":[0.0005630165,0.0001480091,0.0001229136,0.0006590164,0.0003894416,0.0003097455,0.0006853153,0.0002861054,0.0002819252],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001772291,"about_ca_system_score_gemma":0.0001605327,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001473499,"about_ca_topic_score_gemma":0.002481073,"domain_scores_codex":[0.9997631,0.00004798964,0.00002354499,0.00007933084,0.00003491098,0.00005114023],"domain_scores_gemma":[0.9995364,0.00009971682,0.0001273143,0.00003609469,0.00007930612,0.0001212198],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005632765,0.0001042742,0.610918,0.0001666704,0.0001066286,0.0007398098,0.003370424,0.000473548,0.3459301,0.0002731666,0.00009591785,0.03725809],"study_design_scores_gemma":[0.00001283028,0.0001663432,0.9922727,0.00002232863,0.00002688394,0.001368574,0.001155391,0.0004691186,0.003016033,0.00008309357,0.001396635,0.000009992536],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986377,0.0003026676,0.0004375888,0.00001320112,0.00000157286,0.000008394007,0.00006210612,0.000008704918,0.0005280792],"genre_scores_gemma":[0.9987931,0.0001385658,0.0006919793,0.00001276525,0.000002017169,0.000005719894,0.0002222882,0.000002293309,0.000131212],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001500535,"threshold_uncertainty_score":0.002929807,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3187375978","doi":"10.1007/s13225-021-00481-x","title":"Defining a species in fungal plant pathology: beyond the species level","year":2021,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Subspecies; Species complex; Species name; Identification (biology); Confusion; Ecology; Evolutionary biology; Taxonomy (biology); Phylogenetic tree; Genetics","authors":[{"name":"Ishara S. Manawasinghe","is_ca":false},{"name":"Alan J. L. Phillips","is_ca":false},{"name":"Jianping Xu","is_ca":true},{"name":"A. Balasuriya","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Łukasz Stępień","is_ca":false},{"name":"Dulanjalee L. Harischandra","is_ca":false},{"name":"Anuruddha Karunarathna","is_ca":false},{"name":"Jiye Yan","is_ca":false},{"name":"Janith Weerasinghe","is_ca":false},{"name":"Mei Luo","is_ca":false},{"name":"Zhangyong Dong","is_ca":false},{"name":"Ratchadawan Cheewangkoon","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02644463507819306,"gpt":0.2096794250478944,"spread":0.1832347899697014,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007567591,0.001274706,0.001153853,0.003952363,0.006643982,0.006531485,0.002412564,0.005012255,0.002607954],"category_scores_gemma":[0.008284951,0.0004198662,0.0008997383,0.003626908,0.02512055,0.0235574,0.005834476,0.006955636,0.001427952],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00411402,"about_ca_system_score_gemma":0.003414813,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003193705,"about_ca_topic_score_gemma":0.003929441,"domain_scores_codex":[0.9924679,0.003855215,0.0008776344,0.001062158,0.001469822,0.0002672978],"domain_scores_gemma":[0.9930776,0.004014149,0.0008088417,0.0005563447,0.001193172,0.0003499557],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0001171924,0.00005855291,0.004222565,0.002634652,0.00004066624,0.001371124,0.03088508,0.0005796329,0.007052605,0.7567099,0.02605497,0.1702729],"study_design_scores_gemma":[0.000008952099,0.0001230702,0.003474521,0.001893448,0.00004577624,0.004313098,0.01127327,0.0008264516,0.00243885,0.2102324,0.7652514,0.0001188427],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.04739326,0.3882324,0.2911691,0.09027876,0.02889438,0.0004015533,0.000361204,0.0005477202,0.1527217],"genre_scores_gemma":[0.4673002,0.1251308,0.330211,0.03892274,0.01014415,0.0004339523,0.0005808627,0.000648443,0.0266278],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.007567591,"threshold_uncertainty_score":0.04002172,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4403425498","doi":"10.1007/s13225-024-00540-z","title":"Classes and phyla of the kingdom Fungi","year":2024,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Université du Québec en Abitibi-Témiscamingue","funders":"","keywords":"Chytridiomycota; Phylum; Ascomycota; Biology; Phylogenetics; Evolutionary biology; Taxonomic rank; Clade; Zoology; Ecology; Paleontology; Taxon; Genetics","authors":[{"name":"Nalin N. Wijayawardene","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Kirill V. Mikhailov","is_ca":false},{"name":"Gábor Péter","is_ca":false},{"name":"André Aptroot","is_ca":false},{"name":"Carmen Lidia Amorim Pires‐Zottarelli","is_ca":false},{"name":"Bruno Tomio Goto","is_ca":false},{"name":"Yuri S. Tokarev","is_ca":false},{"name":"Danny Haelewaters","is_ca":false},{"name":"Samantha C. Karunarathna","is_ca":false},{"name":"Paul M. Kirk","is_ca":false},{"name":"André Luiz Cabral Monteiro de Azevedo Santiago","is_ca":false},{"name":"Ramesh K. Saxena","is_ca":false},{"name":"Nathan Schoutteten","is_ca":false},{"name":"Madhara K. Wimalasena","is_ca":false},{"name":"Vladimir V. Aleoshin","is_ca":false},{"name":"Abdullah M. S. Al‐Hatmi","is_ca":false},{"name":"Kahandawa G. S. U. Ariyawansa","is_ca":false},{"name":"A. Assunção","is_ca":false},{"name":"T. C. Bamunuarachchige","is_ca":false},{"name":"Hans-Otto Baral","is_ca":false},{"name":"D. Jayarama Bhat","is_ca":false},{"name":"Janusz Błaszkowski","is_ca":false},{"name":"Teun Boekhout","is_ca":false},{"name":"Nattawut Boonyuen","is_ca":false},{"name":"Michael Brysch‐Herzberg","is_ca":false},{"name":"Bin Cao","is_ca":false},{"name":"Jonathan Cazabonne","is_ca":true},{"name":"Xue-Mei Chen","is_ca":false},{"name":"Claudia Coleine","is_ca":false},{"name":"Dong-Qin Dai","is_ca":false},{"name":"Heide-Marie Daniel","is_ca":false},{"name":"Suzana B. G. da Silva","is_ca":false},{"name":"Francisco Adriano de Souza","is_ca":false},{"name":"Somayeh Dolatabadi","is_ca":false},{"name":"Manish Kumar Dubey","is_ca":false},{"name":"Arun Kumar Dutta","is_ca":false},{"name":"Aseni Ediriweera","is_ca":false},{"name":"Eleonora Egidi","is_ca":false},{"name":"Mostafa S. Elshahed","is_ca":false},{"name":"Xinlei Fan","is_ca":false},{"name":"Mahesh C. A. Galappaththi","is_ca":false},{"name":"Marizeth Groenewald","is_ca":false},{"name":"Li-Su Han","is_ca":false},{"name":"Bo Huang","is_ca":false},{"name":"Vedprakash G. Hurdeal","is_ca":true},{"name":"Anastasia Ignatieva","is_ca":false},{"name":"Gustavo Henrique Jerônimo","is_ca":false},{"name":"Ana Lúcia de Jesus","is_ca":false},{"name":"Serhii Y. Kondratyuk","is_ca":false},{"name":"Jaturong Kumla","is_ca":false},{"name":"Martin Kukwa","is_ca":false},{"name":"Qirui Li","is_ca":false},{"name":"Juliana Luiza Rocha de Lima","is_ca":false},{"name":"Xiaoyong Liu","is_ca":false},{"name":"Wenhua Lu","is_ca":false},{"name":"H. Thorsten Lumbsch","is_ca":false},{"name":"Hugo Madrid","is_ca":false},{"name":"Franco Magurno","is_ca":false},{"name":"Guy Marson","is_ca":false},{"name":"Eric H. C. McKenzie","is_ca":false},{"name":"Audrius Menkis","is_ca":false},{"name":"Armin Mešić","is_ca":false},{"name":"Eduardo Sanches Pereira do Nascimento","is_ca":false},{"name":"Elena Nassonova","is_ca":false},{"name":"Yong Nie","is_ca":false},{"name":"Emilia Anna Ossowska","is_ca":false},{"name":"Julia Pawłowska","is_ca":false},{"name":"Ursula Peintner","is_ca":false},{"name":"Igor R. Pozdnyakov","is_ca":false},{"name":"Bhagya M. Premarathne","is_ca":false},{"name":"Alviti Kankanamalage Hasith Priyashantha","is_ca":false},{"name":"C. Alisha Quandt","is_ca":false},{"name":"Mariana Bessa de Queiroz","is_ca":false},{"name":"Kunhiraman C. Rajeshkumar","is_ca":false},{"name":"Mubashar Raza","is_ca":false},{"name":"Niranjan Roy","is_ca":false},{"name":"Milan C. Samarakoon","is_ca":false},{"name":"Alessandra Antunes dos Santos","is_ca":false},{"name":"Lidiane Alves dos Santos","is_ca":false},{"name":"Felix Schumm","is_ca":false},{"name":"Laura Selbmann","is_ca":false},{"name":"Faruk Selçuk","is_ca":false},{"name":"D. Rabern Simmons","is_ca":false},{"name":"Anastasia V. Simakova","is_ca":false},{"name":"Maudy Th. Smith","is_ca":false},{"name":"Onden Paraparath Sruthi","is_ca":false},{"name":"Nakarin Suwannarach","is_ca":false},{"name":"Kazuaki Tanaka","is_ca":false},{"name":"Saowaluck Tibpromma","is_ca":false},{"name":"Merve Ulukapı","is_ca":false},{"name":"Nicolas Van Vooren","is_ca":false},{"name":"Dhanushka N. Wanasinghe","is_ca":false},{"name":"Evi Weber","is_ca":false},{"name":"Qianzhen Wu","is_ca":false},{"name":"Eunju Yang","is_ca":false},{"name":"Ryuichi Yoshioka","is_ca":false},{"name":"Noha H. Youssef","is_ca":false},{"name":"Annemarie Zandijk","is_ca":false},{"name":"Guiqing Zhang","is_ca":false},{"name":"Jinyong Zhang","is_ca":false},{"name":"Heng Zhao","is_ca":false},{"name":"Oleg A. Zverkov","is_ca":false},{"name":"Marco Thines","is_ca":false},{"name":"Sergey A. Karpov","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01883444083225636,"gpt":0.2003577360475849,"spread":0.1815232952153286,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004288674,0.000370748,0.0002939084,0.003538782,0.0009398109,0.002609004,0.0005442864,0.0003735983,0.006869453],"category_scores_gemma":[0.001341122,0.0001387034,0.0004402723,0.0028537,0.000707402,0.001138536,0.001193343,0.0005886247,0.002277467],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005309418,"about_ca_system_score_gemma":0.0003319216,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001577551,"about_ca_topic_score_gemma":0.001030036,"domain_scores_codex":[0.9992937,0.0001150654,0.00005723135,0.0001861926,0.0001511617,0.0001967162],"domain_scores_gemma":[0.9989251,0.0001968487,0.0002827922,0.0000977754,0.0002968511,0.0002004945],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001257375,0.0001372589,0.3871022,0.001255629,0.0003361898,0.0007153886,0.00517711,0.002391771,0.07312894,0.04613321,0.0101526,0.4722124],"study_design_scores_gemma":[0.00003294752,0.000217159,0.7938313,0.0004990319,0.0001413901,0.00164294,0.004235037,0.006266387,0.005890578,0.02855839,0.1586086,0.00007614299],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8726427,0.02147579,0.02415127,0.001026189,0.0002436304,0.0002177529,0.01126267,0.0005775728,0.06840245],"genre_scores_gemma":[0.9805854,0.002662553,0.007956212,0.0001384674,0.00005958211,0.00005631263,0.004855004,0.00006637022,0.003620175],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006869453,"threshold_uncertainty_score":0.02298063,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4221125287","doi":"10.1007/s13225-022-00500-5","title":"Forecasting the number of species of asexually reproducing fungi (Ascomycota and Basidiomycota)","year":2022,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of New Brunswick","funders":"State Key Laboratory of Functions and Applications of Medicinal Plants, Guizhou Medical University; Yunnan Provincial Science and Technology Department; National Natural Science Foundation of China","keywords":"Biology; Asexual reproduction; Taxon; Botany; Biodiversity; Mycology; Ascomycota; Ecology; Alternaria","authors":[{"name":"Nalin N. Wijayawardene","is_ca":false},{"name":"Alan J. L. Phillips","is_ca":false},{"name":"Diana S. Pereira","is_ca":false},{"name":"Dong-Qin Dai","is_ca":false},{"name":"André Aptroot","is_ca":false},{"name":"Josiane Santana Monteiro","is_ca":false},{"name":"Irina S. Druzhinina","is_ca":false},{"name":"Feng Cai","is_ca":false},{"name":"Xinlei Fan","is_ca":false},{"name":"Laura Selbmann","is_ca":false},{"name":"Claudia Coleine","is_ca":false},{"name":"Rafael F. Castañeda-Ruíz","is_ca":false},{"name":"Martin Kukwa","is_ca":false},{"name":"Adam Flakus","is_ca":false},{"name":"Patrícia Oliveira Fiúza","is_ca":false},{"name":"Paul M. Kirk","is_ca":false},{"name":"Kunhiraman C. Rajeshkumar","is_ca":false},{"name":"Ilesha S. leperuma Arachchi","is_ca":true},{"name":"Nakarin Suwannarach","is_ca":false},{"name":"Lizhou Tang","is_ca":false},{"name":"Teun Boekhout","is_ca":false},{"name":"Chen Shuhui Tan","is_ca":false},{"name":"R. P. Prabath K. Jayasinghe","is_ca":false},{"name":"Marco Thines","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03538190550855894,"gpt":0.2049129567379732,"spread":0.1695310512294143,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00139424,0.0009540616,0.0007009589,0.006148966,0.0004777161,0.001754886,0.0008472452,0.001032754,0.001976196],"category_scores_gemma":[0.002791787,0.0003175781,0.0005515247,0.004250563,0.0004296557,0.00368372,0.0009987525,0.0007986865,0.002016027],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000487031,"about_ca_system_score_gemma":0.0006508584,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004973134,"about_ca_topic_score_gemma":0.005194654,"domain_scores_codex":[0.9987644,0.0001343077,0.0001282801,0.0004179555,0.0004054705,0.0001495699],"domain_scores_gemma":[0.9971153,0.0004777556,0.0007091411,0.0001563294,0.001149882,0.0003916557],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0001854009,0.0001045825,0.7477534,0.001606342,0.0001348506,0.0006466943,0.0004905034,0.002763832,0.007565503,0.001298419,0.01501187,0.2224385],"study_design_scores_gemma":[0.00002737291,0.0002227399,0.8396651,0.000753135,0.0004599776,0.0016764,0.003707143,0.03222225,0.006277858,0.004742969,0.1101188,0.0001262713],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7851222,0.09063796,0.0460527,0.002038854,0.0006991743,0.0004246418,0.0502655,0.001095191,0.02366391],"genre_scores_gemma":[0.8897244,0.0292253,0.03218237,0.0003712247,0.0004250608,0.0002469439,0.04486369,0.00007073444,0.002890222],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006148966,"threshold_uncertainty_score":0.009888411,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2046612218","doi":"10.1007/s13225-009-0006-8","title":"Potential use of barcoding to identify aquatic hyphomycetes","year":2010,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Allison University; Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Hyphomycetes; Cladogram; Biology; Intraspecific competition; Phylogenetic tree; Taxonomy (biology); Interspecific competition; DNA barcoding; Conidium; Bionomics; Phylogenetics; Internal transcribed spacer; Ecology; Mycology; Evolutionary biology; Zoology; Botany; Cladistics; Genetics","authors":[{"name":"Allan Letourneau","is_ca":true},{"name":"Sahadevan Seena","is_ca":false},{"name":"Ludmila Marvanová","is_ca":false},{"name":"Feli× Bärlocher","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0185396464293323,"gpt":0.2419034645695356,"spread":0.2233638181402033,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001390835,0.0005511679,0.0002879713,0.002049688,0.0004261524,0.0006019427,0.0005355635,0.0006817371,0.0009893606],"category_scores_gemma":[0.004912314,0.0002748469,0.0002868721,0.001340827,0.0005237864,0.0007461395,0.0006118955,0.0005908653,0.0004607502],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002730487,"about_ca_system_score_gemma":0.0005205475,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001064493,"about_ca_topic_score_gemma":0.002399059,"domain_scores_codex":[0.9991376,0.0003780892,0.00005822412,0.0001583224,0.0001766495,0.00009107371],"domain_scores_gemma":[0.9956604,0.002473327,0.0008144454,0.0002576632,0.0005977819,0.0001964428],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005013832,0.0001116351,0.04806058,0.0005228433,0.00005240273,0.0004819137,0.001263087,0.002184581,0.7269027,0.002056472,0.0004403347,0.217422],"study_design_scores_gemma":[0.00008167402,0.001579787,0.1883535,0.0008516145,0.0002994906,0.004471875,0.00267488,0.05773044,0.7116172,0.007878784,0.02422359,0.0002372706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8932774,0.001877795,0.09825446,0.0005942403,0.00008998764,0.0001990915,0.001227883,0.000328921,0.004150243],"genre_scores_gemma":[0.8140585,0.0008857265,0.1825631,0.0001955482,0.00002937787,0.0001071603,0.000896161,0.00004220404,0.001222225],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002049688,"threshold_uncertainty_score":0.007355511,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2008371172","doi":"10.1007/s13225-015-0321-1","title":"Dismantling Melaspileaceae: a first phylogenetic study of Buelliella, Hemigrapha, Karschia, Labrocarpon and Melaspilea","year":2015,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Polar Knowledge Canada","keywords":"Polyphyly; Dothideomycetes; Biology; Phylogenetic tree; Genus; Taxon; Zoology; Phylogenetics; Ascomycota; Taxonomy (biology); Evolutionary biology; Botany; Clade","authors":[{"name":"Damien Ertz","is_ca":false},{"name":"Paul Diederich","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03486547545023166,"gpt":0.1961790597791686,"spread":0.1613135843289369,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002324968,0.0004028559,0.0002811915,0.001013824,0.0006237755,0.0005880654,0.0002807038,0.0003828625,0.00105824],"category_scores_gemma":[0.0004919959,0.0001061046,0.0002415124,0.0009625981,0.0002446985,0.0004584859,0.0005784955,0.0005343212,0.0006693932],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002115751,"about_ca_system_score_gemma":0.0002758637,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001879348,"about_ca_topic_score_gemma":0.002743543,"domain_scores_codex":[0.9998425,0.00002453661,0.00001382293,0.00004467377,0.00002852109,0.00004591774],"domain_scores_gemma":[0.999608,0.00005335336,0.0001010434,0.00003318745,0.00007275839,0.0001316749],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008559551,0.0001950277,0.1167023,0.0003825014,0.00007445974,0.001019329,0.005148344,0.0002600596,0.7406641,0.0002054106,0.0003218973,0.1341708],"study_design_scores_gemma":[0.00002035365,0.0008376807,0.9450704,0.00008933096,0.0001100422,0.004780726,0.00249056,0.001064014,0.01078813,0.0001365128,0.03457545,0.00003671251],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953316,0.00160937,0.001180941,0.00007082925,0.0000108112,0.00003392676,0.0003278218,0.00002727762,0.001407505],"genre_scores_gemma":[0.9888114,0.001294225,0.006415638,0.00007003287,0.0000206781,0.00003112293,0.002225813,0.00001482148,0.00111641],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001879348,"threshold_uncertainty_score":0.003736794,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2058792898","doi":"10.1007/s13225-011-0129-6","title":"Poplar rust systematics and refinement of Melampsora species delineation","year":2011,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Center for Northern Studies; Natural Resources Canada; Agriculture and Agri-Food Canada; Canadian Forest Service","funders":"Natural Resources Canada; Natural Sciences and Engineering Research Council of Canada; Ontario Genomics Institute; Canadian Natural Resources Limited; Genome Canada","keywords":"Biology; Taxonomy (biology); Taxon; Systematics; Phylogenetic tree; Concordance; Mycology; Rust (programming language); Dothideomycetes; Botany; Ecology; Zoology; Evolutionary biology; Bioinformatics","authors":[{"name":"Agathe Vialle","is_ca":true},{"name":"Pascal Frey","is_ca":false},{"name":"Sarah Hambleton","is_ca":true},{"name":"Louis Bernier","is_ca":true},{"name":"Richard C. Hamelin","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03397868786161509,"gpt":0.2049136661208796,"spread":0.1709349782592645,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001855188,0.0004322704,0.000463765,0.003805199,0.0007431117,0.00123596,0.0006798921,0.0003085542,0.0006367554],"category_scores_gemma":[0.001599521,0.0001872403,0.0003666093,0.001673099,0.0008394379,0.002350568,0.0008603533,0.0005878376,0.0001989574],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000707105,"about_ca_system_score_gemma":0.0009984751,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001839296,"about_ca_topic_score_gemma":0.003505873,"domain_scores_codex":[0.9993655,0.0001842382,0.0001406749,0.0001532875,0.00009972289,0.00005658845],"domain_scores_gemma":[0.9988062,0.0003761043,0.0002992153,0.000084493,0.0003406981,0.00009334576],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0002281728,0.00005746488,0.06883552,0.005233695,0.0001418001,0.001628585,0.005264338,0.001412062,0.03347533,0.008211694,0.001201255,0.8743101],"study_design_scores_gemma":[0.00002404843,0.00114499,0.3742354,0.00442806,0.0005340712,0.01763391,0.007511509,0.004203214,0.01721537,0.0133791,0.5595429,0.0001473873],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.3003576,0.6262218,0.05107332,0.002500775,0.0006592182,0.0001444714,0.0003646017,0.0003112813,0.01836707],"genre_scores_gemma":[0.7282325,0.2095935,0.05729908,0.0007067505,0.000717425,0.00006862608,0.0007918235,0.00006405151,0.002526203],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.003805199,"threshold_uncertainty_score":0.009811342,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1991871837","doi":"10.1007/s13225-013-0244-7","title":"Dothiorella vidmadera, a novel species from grapevines in Australia and notes on Spencermartinsia","year":2013,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Grape and Wine Research and Development Corporation","keywords":"Biology; Botany; Phylogenetic tree; Mycology; Genus; Hypocreales; Internal transcribed spacer; Taxonomy (biology); Ascomycota; Gene; Genetics","authors":[{"name":"Wayne Pitt","is_ca":false},{"name":"Florent P. Trouillas","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03252219282406665,"gpt":0.2277483354184074,"spread":0.1952261425943408,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001233533,0.0004043849,0.0002177461,0.0006314607,0.0007092023,0.0005657141,0.0002701575,0.0004017241,0.0003101169],"category_scores_gemma":[0.0002263444,0.0001725949,0.0001559856,0.0003897079,0.0002496592,0.0003105205,0.0004794179,0.0002801087,0.0001294795],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000204639,"about_ca_system_score_gemma":0.0003158425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003161117,"about_ca_topic_score_gemma":0.00640995,"domain_scores_codex":[0.9998406,0.00001050157,0.0000183049,0.00007548271,0.0000299543,0.00002504782],"domain_scores_gemma":[0.9998778,0.00001318924,0.00003972333,0.00001323965,0.00002517539,0.00003089081],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003012525,0.0001610684,0.1468912,0.0003953987,0.00005078078,0.007937991,0.00569362,0.0005039058,0.7597915,0.0002516545,0.0003338121,0.07768779],"study_design_scores_gemma":[0.0000238982,0.0005604239,0.9447203,0.0001034174,0.00005951114,0.01366665,0.002382293,0.000535346,0.0154738,0.0001057986,0.02233721,0.00003140683],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970909,0.0006462439,0.0003320578,0.00003495381,0.00002042185,0.00002881838,0.00009730554,0.000009860895,0.001739409],"genre_scores_gemma":[0.9955258,0.0005215071,0.001704126,0.0000523049,0.00001881341,0.0000192483,0.0006268608,0.000003332106,0.001527945],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003161117,"threshold_uncertainty_score":0.006285489,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2612855985","doi":"","title":"Determining fungal diversity on Dendroctonus ponderosae and Ips pini affecting lodgepole pine using cultural and molecular methods","year":2005,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Dendroctonus; Biology; Bark beetle; Mountain pine beetle; Pinus contorta; Botany; Ribosomal DNA; Internal transcribed spacer; Bark (sound); Taxon; Restriction fragment length polymorphism; Genetic diversity; Ribosomal RNA; Ecology; Phylogenetics; Curculionidae; Polymerase chain reaction; Population; Genetics; Gene","authors":[{"name":"Woon Lim Young","is_ca":true},{"name":"Jae Jin Kim","is_ca":true},{"name":"Monica Lu","is_ca":true},{"name":"Colette Breuil","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04199177053990621,"gpt":0.3060407397236686,"spread":0.2640489691837624,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002371064,0.0003615858,0.0002799071,0.001707213,0.0006971104,0.0005366655,0.0003783213,0.0003190509,0.0003145165],"category_scores_gemma":[0.0003650163,0.000235837,0.0001786494,0.0007620331,0.0003091187,0.0002742752,0.0004762014,0.0005687339,0.00009928841],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006309087,"about_ca_system_score_gemma":0.0003026123,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008917358,"about_ca_topic_score_gemma":0.02943385,"domain_scores_codex":[0.9996442,0.00004427069,0.00002613436,0.0001111673,0.0001002567,0.00007407316],"domain_scores_gemma":[0.9991435,0.0002357308,0.0001967731,0.00003055963,0.0001669877,0.0002264292],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002473143,0.00007479687,0.05275085,0.00004491471,0.00002855574,0.0002329788,0.0005232917,0.00009978182,0.942039,0.00008780498,0.00001931363,0.003851594],"study_design_scores_gemma":[0.000009728462,0.0002600445,0.9318573,0.000009842208,0.00005481126,0.0003778271,0.0005654178,0.0002990894,0.06589596,0.00005050288,0.000607682,0.00001184111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986972,0.0001408477,0.000240306,0.000004824418,0.000001985898,0.00001384,0.0002173779,0.000003160824,0.0006804744],"genre_scores_gemma":[0.9979311,0.0001388726,0.0006832966,0.00001921773,0.000003747567,0.00001916384,0.0005240665,0.000004197589,0.0006762495],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008917358,"threshold_uncertainty_score":0.01773089,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2028231189","doi":"10.1007/s13225-011-0097-x","title":"The phylogenetic position of the lichenicolous ascomycete Capronia peltigerae","year":2011,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Brandon University","funders":"","keywords":"Biology; Phylogenetic tree; Polyphyly; Lichen; Ribosomal RNA; Phylogenetics; Lineage (genetic); Evolutionary biology; Botany; Genetics; Gene; Clade","authors":[{"name":"Wendy A. Untereiner","is_ca":true},{"name":"Cécile Gueidan","is_ca":false},{"name":"Mary-Jane Orr","is_ca":true},{"name":"Paul Diederich","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02494473202153154,"gpt":0.1680208625411992,"spread":0.1430761305196676,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002611679,0.000239819,0.0003066126,0.001760486,0.0006424059,0.0008480973,0.0002724851,0.000494847,0.0007998775],"category_scores_gemma":[0.0009701299,0.0001603304,0.0001161287,0.000984008,0.0004331739,0.0004547609,0.0006267219,0.0003223206,0.0002600766],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00030666,"about_ca_system_score_gemma":0.0002236619,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001742664,"about_ca_topic_score_gemma":0.002279806,"domain_scores_codex":[0.9996928,0.00004360965,0.00002907884,0.0001106078,0.00005765023,0.00006625706],"domain_scores_gemma":[0.9992759,0.0001455144,0.0001977519,0.00006509291,0.0001496303,0.0001661253],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006354711,0.00007564632,0.4956941,0.0001953046,0.00008991871,0.0007760845,0.002306524,0.0004393214,0.4621215,0.0002531004,0.00007751122,0.03733569],"study_design_scores_gemma":[0.000009094025,0.000301524,0.9887344,0.00002748896,0.00003957549,0.00212342,0.0006628624,0.0005474719,0.005455656,0.00006743327,0.002015171,0.00001596894],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983231,0.0005198656,0.0002392757,0.00001703446,0.000001652371,0.000007058706,0.00006372046,0.000005226414,0.0008228981],"genre_scores_gemma":[0.9991059,0.0001770453,0.0003935548,0.00001118834,0.000003346609,0.000004147216,0.0001624876,0.000001350321,0.0001408652],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001760486,"threshold_uncertainty_score":0.003465056,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3194579716","doi":"10.1007/s13225-021-00487-5","title":"Appressorial interactions with host and their evolution","year":2021,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Intelligence Community Postdoctoral Research Fellowship Program; Thailand Research Fund","keywords":"Appressorium; Biology; Commensalism; Hyaline; Botany; Fungus; Microbiology; Bacteria; Genetics","authors":[{"name":"K. W. Thilini Chethana","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"Yi-Jyun Chen","is_ca":false},{"name":"Sirinapa Konta","is_ca":false},{"name":"Saowaluck Tibpromma","is_ca":false},{"name":"Chayanard Phukhamsakda","is_ca":false},{"name":"Pranami D. Abeywickrama","is_ca":false},{"name":"Milan C. Samarakoon","is_ca":false},{"name":"Chanokned Senwanna","is_ca":false},{"name":"Ausana Mapook","is_ca":false},{"name":"Xia Tang","is_ca":false},{"name":"Deecksha Gomdola","is_ca":false},{"name":"Diana S. Marasinghe","is_ca":false},{"name":"Oundhyalah D. Padaruth","is_ca":false},{"name":"A. Balasuriya","is_ca":false},{"name":"Jianping Xu","is_ca":true},{"name":"Saisamorn Lumyong","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008664661216103098,"gpt":0.192030927951023,"spread":0.1833662667349199,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005208687,0.0003403756,0.0003328352,0.001301681,0.0007778525,0.001318134,0.0004050701,0.000590874,0.0007844708],"category_scores_gemma":[0.0005533601,0.0002183678,0.0003018726,0.001519667,0.000574287,0.0007332768,0.0006077379,0.00050066,0.0003534005],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005999477,"about_ca_system_score_gemma":0.0005352563,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002034013,"about_ca_topic_score_gemma":0.002153556,"domain_scores_codex":[0.9996023,0.00006979958,0.0000219964,0.0001444215,0.00008658453,0.00007483939],"domain_scores_gemma":[0.999734,0.00004851407,0.0000904981,0.00002556773,0.00005759617,0.00004389502],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004878896,0.0001171194,0.2987038,0.001426146,0.0003605715,0.003879124,0.003319006,0.003498079,0.3839943,0.01390809,0.001209679,0.2890961],"study_design_scores_gemma":[0.0000112966,0.0001959243,0.8996293,0.0003142213,0.0001865537,0.006339607,0.001129511,0.002172191,0.01411142,0.004247254,0.07157606,0.00008663686],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9053003,0.07276987,0.006887969,0.0003288704,0.00004826141,0.00003249233,0.000693069,0.00009920311,0.01383987],"genre_scores_gemma":[0.97303,0.01888722,0.005418695,0.0001078043,0.00004296041,0.00001507802,0.000555842,0.00002688524,0.001915689],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002034013,"threshold_uncertainty_score":0.004352987,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4405613147","doi":"10.1007/s13225-024-00541-y","title":"Fungal diversity notes 1818–1918: taxonomic and phylogenetic contributions on genera and species of fungi","year":2024,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University","funders":"","keywords":"Biology; Botany","authors":[{"name":"Ishara S. Manawasinghe","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Dhanushka N. Wanasinghe","is_ca":false},{"name":"Samantha C. Karunarathna","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Milan C. Samarakoon","is_ca":false},{"name":"Hermann Voglmayr","is_ca":false},{"name":"Ka-Lai Pang","is_ca":false},{"name":"Michael Chiang","is_ca":false},{"name":"E. B. Gareth Jones","is_ca":false},{"name":"Ramesh K. Saxena","is_ca":false},{"name":"Arun Kumar","is_ca":true},{"name":"Kunhiraman C. Rajeshkumar","is_ca":false},{"name":"Laura Selbmann","is_ca":false},{"name":"Claudia Coleine","is_ca":false},{"name":"Yuwei Hu","is_ca":false},{"name":"A. Martyn Ainsworth","is_ca":false},{"name":"Kare Liimatainen","is_ca":false},{"name":"Tuula Niskanen","is_ca":false},{"name":"Anna B. Ralaiveloarisoa","is_ca":false},{"name":"Elangovan Arumugam","is_ca":false},{"name":"Kezhocuyi Kezo","is_ca":false},{"name":"Malarvizhi Kaliyaperumal","is_ca":false},{"name":"Sugantha Gunaseelan","is_ca":false},{"name":"Asha J. Dissanayake","is_ca":false},{"name":"Abdul Nasir Khalid","is_ca":false},{"name":"Achala J. Gajanayake","is_ca":false},{"name":"Adam Flakus","is_ca":false},{"name":"Alireza Armand","is_ca":false},{"name":"André Aptroot","is_ca":false},{"name":"Andre Rodrigues","is_ca":false},{"name":"Andrei Tsurykau","is_ca":false},{"name":"Ángela López-Villalba","is_ca":false},{"name":"Antônio Roberto Gomes de Farias","is_ca":false},{"name":"Antonio Sánchez","is_ca":false},{"name":"Aristóteles Goés‐Neto","is_ca":false},{"name":"Bruno Tomio Goto","is_ca":false},{"name":"Carlos Alberto Fragoso de Souza","is_ca":false},{"name":"Charuwan Chuaseeharonnachai","is_ca":false},{"name":"Chuan-Gen Lin","is_ca":false},{"name":"Cui-Jin-Yi Li","is_ca":false},{"name":"Cvetomir M. Denchev","is_ca":false},{"name":"Daniel Guerra-Mateo","is_ca":false},{"name":"Danushka S. Tennakoon","is_ca":false},{"name":"De-Ping Wei","is_ca":false},{"name":"Dominik Begerow","is_ca":false},{"name":"Eduardo Alves","is_ca":false},{"name":"Elisandro Ricardo Drechsler‐Santos","is_ca":false},{"name":"Enayra Silva Sousa","is_ca":false},{"name":"Érika Valente de Medeiros","is_ca":false},{"name":"Ewald Langer","is_ca":false},{"name":"Zhang Fa","is_ca":false},{"name":"Francisco Adriano de Souza","is_ca":false},{"name":"Franco Magurno","is_ca":false},{"name":"Gabriel Ginane Barreto","is_ca":false},{"name":"Gabriel Moreno","is_ca":false},{"name":"Gajanan Mane","is_ca":false},{"name":"Genivaldo Alves-Silva","is_ca":false},{"name":"Gladstone Alves da Silva","is_ca":false},{"name":"Guiyang Xia","is_ca":false},{"name":"H. F. Shen","is_ca":false},{"name":"Heng Gui","is_ca":false},{"name":"Indunil C. Senanayake","is_ca":false},{"name":"Janet Jennifer Luangsa-ard","is_ca":false},{"name":"Jia-Wei Liu","is_ca":false},{"name":"Jian‐Kui Liu","is_ca":false},{"name":"Jian Ma","is_ca":false},{"name":"Jieying Lin","is_ca":false},{"name":"José Evando Aguiar Beserra","is_ca":false},{"name":"J. Cano","is_ca":false},{"name":"Josepa Gené","is_ca":false},{"name":"Li Lu","is_ca":false},{"name":"Lidiane Alves dos Santos","is_ca":false},{"name":"Lijian Xu","is_ca":false},{"name":"Lorena Tigre Lacerda","is_ca":false},{"name":"Luís Fernando Pascholati Gusmão","is_ca":false},{"name":"Marcela E. S. Cáceres","is_ca":false},{"name":"Marcos Paz Saraiva Câmara","is_ca":false},{"name":"Maria Beatriz Barbosa de Barros-Barreto","is_ca":false},{"name":"Mark S. Calabon","is_ca":false},{"name":"Martin Kukwa","is_ca":false},{"name":"Martin Kemler","is_ca":false},{"name":"Maruzanete Pereira de Melo","is_ca":false},{"name":"Masoomeh Ghobad‐Nejhad","is_ca":false},{"name":"Mei Luo","is_ca":false},{"name":"Mengmeng Ding","is_ca":false},{"name":"Mingkwan Doilom","is_ca":false},{"name":"Monthien Phonemany","is_ca":false},{"name":"Muhammad Usman","is_ca":false},{"name":"Naritsada Thongklang","is_ca":false},{"name":"Nattawut Boonyuen","is_ca":false},{"name":"Nikhil Ashtekar","is_ca":false},{"name":"Nuwan D. Kularathnage","is_ca":false},{"name":"Papichaya Kwantong","is_ca":false},{"name":"Parayelil A. Ansil","is_ca":false},{"name":"Pepijn W. Kooij","is_ca":false},{"name":"Qi Zhao","is_ca":false},{"name":"Rafael Ferreira Alfenas","is_ca":false},{"name":"Rafael José Vilela de Oliveira","is_ca":false},{"name":"Raghvendra Singh","is_ca":false},{"name":"Rejane M. F. Silva","is_ca":false},{"name":"Rameshwar Avchar","is_ca":false},{"name":"Rashmi Morey","is_ca":false},{"name":"Rohit Sharma","is_ca":false},{"name":"Rong-Ju Xu","is_ca":false},{"name":"Rosa Mara Borges da Silveira","is_ca":false},{"name":"Rui-Fang Xu","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"Salna Nanu","is_ca":false},{"name":"Salilaporn Nuankaew","is_ca":false},{"name":"Saowaluck Tibpromma","is_ca":false},{"name":"Saranyapath Boonmie","is_ca":false},{"name":"Sayanh Somrithipol","is_ca":false},{"name":"Sherin Varghese","is_ca":false},{"name":"Silvino Intra Moreira","is_ca":false},{"name":"Soumyadeep Rajwar","is_ca":false},{"name":"SHU-CHENG HE","is_ca":false},{"name":"T. K. Arun Kumar","is_ca":false},{"name":"Teodor T. Denchev","is_ca":false},{"name":"Thatsanee Luangharn","is_ca":false},{"name":"Thays Gabrielle Lins de Oliveira","is_ca":false},{"name":"Tian‐Ye Du","is_ca":false},{"name":"Ting‐Chi Wen","is_ca":false},{"name":"Tingting Du","is_ca":false},{"name":"Tong Wu","is_ca":false},{"name":"Veera Sri‐indrasutdhi","is_ca":false},{"name":"Vinson P. Doyle","is_ca":false},{"name":"Vladimir A. Baulin","is_ca":false},{"name":"Wei Dong","is_ca":false},{"name":"Wenli Li","is_ca":false},{"name":"Wenhua Lu","is_ca":false},{"name":"Wenhui Tian","is_ca":false},{"name":"Willie Anderson dos Santos Vieira","is_ca":false},{"name":"Wolfgang von Brackel","is_ca":false},{"name":"Xian-Dong Yu","is_ca":false},{"name":"Xian Zhang","is_ca":false},{"name":"Liu Xf","is_ca":false},{"name":"Xing-Can Peng","is_ca":false},{"name":"Yanpeng Chen","is_ca":false},{"name":"Yanyan Yang","is_ca":false},{"name":"Ying Gao","is_ca":false},{"name":"Yin-Ru Xiong","is_ca":false},{"name":"Yongxin Shu","is_ca":false},{"name":"Yong‐Zhong Lu","is_ca":false},{"name":"Yuan‐Min Shen","is_ca":false},{"name":"Yueyan Zhou","is_ca":false},{"name":"Yu Zhang","is_ca":false},{"name":"Wei Zhang","is_ca":false},{"name":"Zong-Long Luo","is_ca":false},{"name":"Manawaduge Ayesha Madushani","is_ca":false},{"name":"Ratchadawan Cheewangkoon","is_ca":false},{"name":"Jia Song","is_ca":false},{"name":"Biao Xu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01601712908849866,"gpt":0.2123069646738127,"spread":0.196289835585314,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008958034,0.0008746735,0.0004605135,0.009897928,0.0009977245,0.001747051,0.0006504175,0.0003629857,0.02751452],"category_scores_gemma":[0.003182485,0.0002437469,0.0003380002,0.01578951,0.001040733,0.002171966,0.002104523,0.001468904,0.01182577],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008948352,"about_ca_system_score_gemma":0.0009841528,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005177969,"about_ca_topic_score_gemma":0.006589978,"domain_scores_codex":[0.9990296,0.0001166933,0.0001292423,0.0001323797,0.0004651826,0.0001268892],"domain_scores_gemma":[0.9975742,0.0006628044,0.0004857906,0.0003595183,0.0006010773,0.0003167603],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0002151936,0.0000379706,0.01185996,0.0008868481,0.00004753151,0.000273172,0.00156906,0.0005491027,0.008692592,0.007844839,0.1612623,0.8067614],"study_design_scores_gemma":[0.000006631886,0.00002469512,0.02588256,0.0002682365,0.000009312142,0.0006453741,0.0002870705,0.0001141046,0.0007136695,0.001127187,0.970903,0.00001822297],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"other","genre_gemma":"empirical","genre_scores_codex":[0.07950611,0.1305303,0.03791343,0.005107895,0.01386994,0.0006317179,0.1103129,0.002497235,0.6196304],"genre_scores_gemma":[0.2729579,0.1405746,0.09711046,0.002585667,0.01535183,0.0009498097,0.2043401,0.002543601,0.263586],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.02751452,"threshold_uncertainty_score":0.09204525,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3200133032","doi":"10.1007/s13225-021-00482-w","title":"Contribution to rust flora in China I, tremendous diversity from natural reserves and parks","year":2021,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; State Key Laboratory of Microbial Resources; China National Funds for Distinguished Young Scientists; National Natural Science Foundation of China","keywords":"Biology; Rubus; Phylogenetic tree; Flora (microbiology); Phylogenetic diversity; Botany; Mycology; China; Biodiversity; Basidiomycota; Nature reserve; Ecology; Zoology; Geography; Archaeology","authors":[{"name":"Peng Zhao","is_ca":false},{"name":"Zhifeng Zhang","is_ca":false},{"name":"Dian-Ming Hu","is_ca":false},{"name":"Xiao-Hua Qi","is_ca":false},{"name":"Dorji Phurbu","is_ca":false},{"name":"Yusufjon Gafforov","is_ca":false},{"name":"Lei Cai","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008864528757037736,"gpt":0.2143403098411297,"spread":0.205475781084092,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003071744,0.0002985246,0.0003680149,0.002472793,0.0008539252,0.0006812116,0.0002271254,0.0001907532,0.001252184],"category_scores_gemma":[0.0002829061,0.0001411081,0.0002628724,0.002866724,0.0005361902,0.000658807,0.0007839185,0.0001798497,0.00008537759],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006081142,"about_ca_system_score_gemma":0.0008898692,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007490709,"about_ca_topic_score_gemma":0.01627393,"domain_scores_codex":[0.9997416,0.00002053935,0.00003318607,0.00008578261,0.00006883399,0.000050066],"domain_scores_gemma":[0.9997211,0.00002803031,0.000104487,0.00002833142,0.0000534552,0.00006444141],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001087562,0.00003780238,0.7440307,0.0008186433,0.0001386352,0.001552009,0.006105401,0.0004493309,0.03703042,0.000626148,0.0006712016,0.2084311],"study_design_scores_gemma":[0.000003336953,0.00002385374,0.994289,0.00002535375,0.00002197105,0.0005268467,0.0005627604,0.0001232042,0.0003523443,0.0001079776,0.003953733,0.00000959359],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946094,0.003410533,0.0002619549,0.00009926021,0.00001115932,0.000009386603,0.0002239269,0.00001672392,0.001357759],"genre_scores_gemma":[0.9967819,0.001719964,0.0004001217,0.0000540408,0.00002980258,0.000007844222,0.000434498,0.000004429361,0.0005672238],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007490709,"threshold_uncertainty_score":0.01489419,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W32451989","doi":"10.1007/s12192-020-01123-y","title":"Unexpected ribosomal DNA internal transcribed spacer sequence variation within Erysiphe aquilegiae sensu lato","year":2004,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Powdery Mildew Fungal Diseases","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Internal transcribed spacer; Biology; Sensu; Delphinium; Powdery mildew; Ribosomal DNA; Botany; Ascomycota; Phylogenetic tree; Taxon; Genus; Genetics; Gene","authors":[{"name":"J. H. Cunnington","is_ca":false},{"name":"Ann C. Lawrie","is_ca":false},{"name":"Ian G. Pascoe","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02789920001495737,"gpt":0.2078978897972505,"spread":0.1799986897822932,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001162383,0.0002144757,0.0001652923,0.0004785159,0.0001834435,0.0001815401,0.0001496405,0.0002634846,0.0009512487],"category_scores_gemma":[0.0001726975,0.00008877861,0.0002755774,0.0003157101,0.0002614507,0.00007851759,0.0001909249,0.0002858922,0.0001810134],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001577899,"about_ca_system_score_gemma":0.00008035974,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00065871,"about_ca_topic_score_gemma":0.001756519,"domain_scores_codex":[0.9998506,0.00002250671,0.000009466822,0.00007332816,0.00002372279,0.00002041171],"domain_scores_gemma":[0.9998367,0.00002295183,0.00009306196,0.00001361344,0.00001119287,0.00002240215],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001352181,0.00001498385,0.004592655,0.00003888687,0.00002539802,0.0002682334,0.0001074186,0.00003340463,0.992981,0.00006113086,0.00002988543,0.001711778],"study_design_scores_gemma":[0.00003552334,0.0005779256,0.9027494,0.00005340717,0.0001204549,0.004197365,0.0004609481,0.0007056072,0.08357543,0.0001464797,0.007347444,0.00003006291],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982761,0.0002371562,0.0006586793,0.00002116794,0.000009511504,0.000008862315,0.0003888777,0.00001382093,0.0003858349],"genre_scores_gemma":[0.9973253,0.0001315081,0.001042595,0.00005457984,0.000008685209,0.00002623609,0.000728269,0.00001304549,0.0006696775],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009512487,"threshold_uncertainty_score":0.003182292,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2018087746","doi":"10.1007/s13225-014-0280-y","title":"Phylogeny and taxonomic revision of Thelonectria discophora (Ascomycota, Hypocreales, Nectriaceae) species complex","year":2014,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Universidad de Costa Rica; National Science Foundation","keywords":"Hypocreales; Biology; Monophyly; Species complex; Chlamydospore; Taxonomy (biology); Botany; Phylogenetic tree; Phylogenetics; PhyloCode; Conidium; Cladistics; Ascomycota; Zoology; Evolutionary biology; Clade","authors":[{"name":"Catalina Salgado‐Salazar","is_ca":false},{"name":"Amy Y. Rossman","is_ca":false},{"name":"Gary J. Samuels","is_ca":false},{"name":"Yuuri Hirooka","is_ca":true},{"name":"Romina M. Sánchez","is_ca":false},{"name":"Priscila Chaverrí","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02528033924265997,"gpt":0.1910845254304798,"spread":0.1658041861878198,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007205368,0.000525163,0.000493189,0.002774445,0.0008345815,0.001082235,0.0007762493,0.0004684875,0.001686891],"category_scores_gemma":[0.0008839087,0.0001800011,0.0003905635,0.001548834,0.0007377066,0.000967691,0.0007434322,0.0007531235,0.0008108025],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006119874,"about_ca_system_score_gemma":0.0007403165,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001723269,"about_ca_topic_score_gemma":0.001669819,"domain_scores_codex":[0.9995467,0.00009607284,0.0001181096,0.0001232835,0.00007108256,0.00004466958],"domain_scores_gemma":[0.9993057,0.00006346784,0.0001693074,0.00008008569,0.0002670931,0.0001143631],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0006114448,0.0002041511,0.1432652,0.001429294,0.0001906799,0.005129836,0.009923025,0.002058152,0.248937,0.002522611,0.003271711,0.5824569],"study_design_scores_gemma":[0.00007708751,0.0006967302,0.754629,0.0005748998,0.000261441,0.01700921,0.004169265,0.003732283,0.007207744,0.001151957,0.2103528,0.0001375612],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9440293,0.01876419,0.02005089,0.0007391325,0.0004957438,0.0004654156,0.001478592,0.0004758483,0.01350089],"genre_scores_gemma":[0.924509,0.0105235,0.04969874,0.0004630793,0.0003526979,0.000344739,0.008826905,0.0001243894,0.005157001],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002774445,"threshold_uncertainty_score":0.005643249,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4410846663","doi":"10.1007/s13225-025-00556-z","title":"Fungal diversity notes 1919–2016: taxonomic and phylogenetic contributions to fungal taxa","year":2025,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Université de Montréal; Université du Québec à Montréal","funders":"National Natural Science Foundation of China","keywords":"Taxon; Biology; Fungal Diversity; Mycology; Phylogenetic tree; Phylogenetic diversity; Biodiversity; Ecology; Phylogenetics; Taxonomy (biology); Zoology; Diversity (politics); Evolutionary biology; Botany; Anthropology; Genetics","authors":[{"name":"Bin Cao","is_ca":false},{"name":"Dorji Phurbu","is_ca":false},{"name":"Anna B. Ralaiveloarisoa","is_ca":false},{"name":"Kare Liimatainen","is_ca":false},{"name":"Tuula Niskanen","is_ca":false},{"name":"Virginia Ramírez-Cruz","is_ca":false},{"name":"Alexander J. Bradshaw","is_ca":false},{"name":"Bryn T. M. Dentinger","is_ca":false},{"name":"Florencia Ramírez-Guillén","is_ca":false},{"name":"Alonso Cortés-Pérez","is_ca":false},{"name":"Laura Guzmán‐Dávalos","is_ca":false},{"name":"Alma Rosa Villalobos-Arámbula","is_ca":false},{"name":"Oscar Castro-Jauregui","is_ca":false},{"name":"Paula Santos da Silva","is_ca":false},{"name":"Naveed Davoodian","is_ca":false},{"name":"Teresa Lebel","is_ca":false},{"name":"Michael A. Castellano","is_ca":false},{"name":"Tom W. May","is_ca":false},{"name":"Merje Toome","is_ca":false},{"name":"Jack Vasey","is_ca":false},{"name":"Katharina Höfer","is_ca":false},{"name":"M. Braithwaite","is_ca":false},{"name":"Lewis Braithwaite","is_ca":false},{"name":"Arun Kumar Dutta","is_ca":false},{"name":"Pinaki Chattopadhyay","is_ca":false},{"name":"Niranjan Roy","is_ca":false},{"name":"Bhaben Tanti","is_ca":false},{"name":"Pinky Rani Biswas","is_ca":false},{"name":"Elangovan Arumugam","is_ca":false},{"name":"Kezhocuyi Kezo","is_ca":false},{"name":"Malarvizhi Kaliyaperumal","is_ca":false},{"name":"Ramesh Murugadoss","is_ca":false},{"name":"Jing‐Xin Ji","is_ca":false},{"name":"Makoto Kakishima","is_ca":false},{"name":"Jerry Cooper","is_ca":false},{"name":"Jorinde Nuytinck","is_ca":false},{"name":"Zong-Long Luo","is_ca":false},{"name":"Wenpeng Wang","is_ca":false},{"name":"Xian Zhang","is_ca":false},{"name":"Ting‐Chi Wen","is_ca":false},{"name":"Xinlei Fan","is_ca":false},{"name":"Ning Jiang","is_ca":false},{"name":"Ning Jiao","is_ca":false},{"name":"Ying Zhang","is_ca":false},{"name":"Ishara S. Manawasinghe","is_ca":false},{"name":"Hua Li","is_ca":false},{"name":"Yin-Ru Xiong","is_ca":false},{"name":"Tao Zhou","is_ca":false},{"name":"Tamotsu Hoshino","is_ca":false},{"name":"Phaedra Lagaet","is_ca":false},{"name":"R. D. Lange","is_ca":false},{"name":"Annemieke Verbeken","is_ca":false},{"name":"Lowie Tondeleir","is_ca":false},{"name":"Cathrin Manz","is_ca":false},{"name":"Felix Hampe","is_ca":false},{"name":"Chang-Lin Zhao","is_ca":false},{"name":"Yang Yang","is_ca":false},{"name":"Guiqing Zhang","is_ca":false},{"name":"Dong-Qin Dai","is_ca":false},{"name":"Michal Tomšovský","is_ca":false},{"name":"Teodor T. Denchev","is_ca":false},{"name":"Cvetomir M. Denchev","is_ca":false},{"name":"Étienne Léveillé‐Bourret","is_ca":true},{"name":"Martin Kemler","is_ca":false},{"name":"Yanpeng Chen","is_ca":false},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Zixuan Feng","is_ca":false},{"name":"Long Wang","is_ca":false},{"name":"Qiming Wang","is_ca":false},{"name":"Shanping Wan","is_ca":false},{"name":"Fuqiang Yu","is_ca":false},{"name":"Jian‐Kui Liu","is_ca":false},{"name":"Hongzhi Du","is_ca":false},{"name":"Na Wu","is_ca":false},{"name":"Hongli Hu","is_ca":false},{"name":"Jian Su","is_ca":false},{"name":"Zonghua Wang","is_ca":false},{"name":"Yanping Hu","is_ca":false},{"name":"Hao Yu","is_ca":false},{"name":"Jing Wang","is_ca":false},{"name":"Yihua Yang","is_ca":false},{"name":"Wei Dong","is_ca":false},{"name":"Yongxin Shu","is_ca":false},{"name":"Haijun Zhao","is_ca":false},{"name":"Chao-Qun Wang","is_ca":false},{"name":"Chun-Fang Liao","is_ca":false},{"name":"Mingkwan Doilom","is_ca":false},{"name":"Guojie Li","is_ca":false},{"name":"Nakarin Suwannarach","is_ca":false},{"name":"Chanokned Senwanna","is_ca":false},{"name":"Yusufjon Gafforov","is_ca":false},{"name":"Adam Flakus","is_ca":false},{"name":"Tomasz Suchan","is_ca":false},{"name":"Óscar Plata","is_ca":false},{"name":"Pamela Rodriguez‐Flakus","is_ca":false},{"name":"Juna Tamang","is_ca":false},{"name":"Krishnendu Acharya","is_ca":false},{"name":"Hongde Yang","is_ca":false},{"name":"Ruvishika S. Jayawardena","is_ca":false},{"name":"Assiata Tiendrebeogo","is_ca":false},{"name":"Cony Decock","is_ca":false},{"name":"Irénée Somda","is_ca":false},{"name":"Anne Legrève","is_ca":false},{"name":"Yang Yu","is_ca":false},{"name":"Yuan-Pin Xiao","is_ca":false},{"name":"Jiaxin Li","is_ca":false},{"name":"Naritsada Thongklang","is_ca":false},{"name":"Xi-Xi Han","is_ca":false},{"name":"Wen-Qiang Yang","is_ca":false},{"name":"Shihui Wang","is_ca":false},{"name":"Mao-Qiang He","is_ca":false},{"name":"Kevin D. Hyde","is_ca":false},{"name":"Rui-Lin Zhao","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009773330292737845,"gpt":0.2306329397290931,"spread":0.2208596094363552,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001340321,0.0006659565,0.0002883792,0.01178006,0.001232902,0.002420472,0.0004693186,0.0003322601,0.01006077],"category_scores_gemma":[0.003976107,0.0002319136,0.0004169346,0.01287008,0.001105346,0.001986388,0.002899079,0.001252856,0.003393802],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009764429,"about_ca_system_score_gemma":0.001086795,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004974213,"about_ca_topic_score_gemma":0.009758091,"domain_scores_codex":[0.99849,0.0002080666,0.0001982162,0.0002159726,0.0006939656,0.0001937893],"domain_scores_gemma":[0.9962162,0.0008535373,0.001102111,0.0004157695,0.0009484946,0.0004638197],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0002171095,0.00004693895,0.1236288,0.001000583,0.0001275284,0.0005409566,0.004690762,0.0007392069,0.01212569,0.006208114,0.04399862,0.8066757],"study_design_scores_gemma":[0.00001317801,0.00007307941,0.3358795,0.0008783512,0.00005505791,0.003217791,0.00246017,0.0007566129,0.002447079,0.003347083,0.6508056,0.00006654946],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.4707288,0.1264469,0.04011942,0.006262177,0.008017183,0.0004299185,0.09535614,0.001497579,0.2511419],"genre_scores_gemma":[0.7182752,0.07077101,0.05665872,0.00112295,0.006347836,0.0002782,0.09750279,0.0009031387,0.04814015],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01178006,"threshold_uncertainty_score":0.0336566,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4401116041","doi":"10.1007/s13225-024-00534-x","title":"Taxonomic revision of Marasmius Fr. and Marasmiaceae Roze ex Kühner based on multigene phylogenetics and morphological evidence","year":2024,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant and Fungal Species Descriptions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Royal Ontario Museum","funders":"Natural Sciences and Engineering Research Council of Canada; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo; Fundação de Amparo à Pesquisa do Estado do Amazonas; National Science Foundation","keywords":"Subgenus; Biology; Sect; Botany; Phylogenetic tree; Clade; Taxonomy (biology); Evolutionary biology; Genetics; Gene","authors":[{"name":"Jadson José Souza de Oliveira","is_ca":false},{"name":"Dennis E. Desjardin","is_ca":false},{"name":"Thomas S. Jenkinson","is_ca":false},{"name":"Simona Margaritescu","is_ca":true},{"name":"Marina Capelari","is_ca":false},{"name":"Jean‐Marc Moncalvo","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03409987182776443,"gpt":0.2387842514390814,"spread":0.204684379611317,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00115093,0.0005700375,0.0005090362,0.002209544,0.0009012978,0.001078237,0.000896387,0.0004432594,0.001483703],"category_scores_gemma":[0.001291868,0.0001248404,0.0003551494,0.0007721065,0.0009643211,0.001338531,0.000946317,0.0006834607,0.0004247277],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001184522,"about_ca_system_score_gemma":0.001440345,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005827071,"about_ca_topic_score_gemma":0.007155116,"domain_scores_codex":[0.9995459,0.0001331394,0.00003792451,0.0001241947,0.00009048686,0.00006842308],"domain_scores_gemma":[0.9995601,0.0000614614,0.0001128196,0.00005374181,0.0001582572,0.00005362365],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0005031892,0.00007971563,0.09714749,0.0009557281,0.0002076475,0.001784932,0.01194422,0.001555951,0.06117332,0.0125541,0.002325154,0.8097685],"study_design_scores_gemma":[0.00006927539,0.001045184,0.5741939,0.001116359,0.0005053182,0.005316814,0.009150795,0.005149176,0.00525743,0.007200414,0.3908634,0.0001320102],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8608906,0.07997923,0.0284851,0.001921971,0.001047478,0.0003462154,0.0005548383,0.000663931,0.02611063],"genre_scores_gemma":[0.9564444,0.007536241,0.02942331,0.000527115,0.0003273497,0.00006941743,0.0008314968,0.00004845475,0.004792307],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005827071,"threshold_uncertainty_score":0.01158631,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4411497529","doi":"10.1007/s13225-025-00559-w","title":"Species diversity of Cladosporium in Citrus and the genetic mechanisms for C. cladosporioides complex to adapt broad host plants","year":2025,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Key Research and Development Program of Zhejiang Province; Key Technologies Research and Development Program; National Key Research and Development Program of China; Agriculture Research System of China","keywords":"Cladosporium cladosporioides; Biology; Cladosporium; Botany; Host (biology); Mycology; Phylogenetics; Gene; Ecology; Genetics; Penicillium","authors":[{"name":"Fang Zheng","is_ca":false},{"name":"Lei Li","is_ca":false},{"name":"Xiaoe Xiao","is_ca":false},{"name":"Yanpeng Chen","is_ca":false},{"name":"Jiejing Tang","is_ca":false},{"name":"Chenhao Li","is_ca":false},{"name":"Jiangnan Huang","is_ca":false},{"name":"Chaofan Zhang","is_ca":false},{"name":"Tingmi Yang","is_ca":false},{"name":"Jianping Xu","is_ca":true},{"name":"Sajeewa S. N. Maharachchikumbura","is_ca":false},{"name":"Chen Jiao","is_ca":false},{"name":"Yan Xie","is_ca":false},{"name":"Hongye Li","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01778045550283569,"gpt":0.219586716943946,"spread":0.2018062614411103,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003059967,0.0005008806,0.0002999413,0.001376173,0.0006116061,0.0005435826,0.0003020277,0.0003282101,0.000900774],"category_scores_gemma":[0.0003446919,0.0002190545,0.0003293062,0.000829773,0.0003167384,0.0004046026,0.0005480604,0.0003497425,0.0001776862],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004319235,"about_ca_system_score_gemma":0.000326607,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00520508,"about_ca_topic_score_gemma":0.005306909,"domain_scores_codex":[0.999611,0.0000313823,0.00003489136,0.0001715677,0.0000570742,0.00009414909],"domain_scores_gemma":[0.9995875,0.00003899595,0.0001463524,0.00002635018,0.00009013224,0.0001107174],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002306073,0.0001266826,0.2858221,0.0003737041,0.00009727981,0.0004949088,0.001000066,0.0002663638,0.6987132,0.0002367178,0.0003490428,0.01228932],"study_design_scores_gemma":[0.000008143685,0.0001095516,0.9892867,0.00004636029,0.0000384809,0.0004656758,0.0006826721,0.0006229233,0.007193473,0.00008643304,0.001439391,0.00002017633],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973752,0.0009307695,0.0004002484,0.0000437695,0.000007303123,0.00002569501,0.0005293471,0.00001315653,0.000674537],"genre_scores_gemma":[0.9981515,0.0002775481,0.0005624108,0.00005512588,0.000003754295,0.00001522165,0.0006120445,0.000004502684,0.0003177965],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00520508,"threshold_uncertainty_score":0.01034957,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4410742573","doi":"10.1007/s13225-025-00557-y","title":"Exploring criteria for constructing suprageneric classifications of fungi in the genomic era: a case study of suborders Agaricineae, Pluteineae, and Tricholomatineae (Agaricales)","year":2025,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Natural Science Foundation of China","keywords":"Agaricales; Mycology; Biology; Zoology; Evolutionary biology; Ecology; Botany; Taxonomy (biology)","authors":[{"name":"Hua Qu","is_ca":false},{"name":"Qing Cai","is_ca":false},{"name":"Scott A. Redhead","is_ca":true},{"name":"Zai-Wei Ge","is_ca":false},{"name":"Zhu‐Liang Yang","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0781910060778617,"gpt":0.2887102182568637,"spread":0.210519212179002,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002233175,0.0004888829,0.0003965106,0.003177496,0.000994854,0.001579167,0.0005066915,0.0005017503,0.000599539],"category_scores_gemma":[0.006877847,0.0001681356,0.0005060317,0.002605409,0.000911484,0.001273255,0.001552399,0.0008248424,0.0002149535],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005331567,"about_ca_system_score_gemma":0.0005611189,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00204862,"about_ca_topic_score_gemma":0.003640194,"domain_scores_codex":[0.9990234,0.000285218,0.0001211542,0.0002684104,0.0001918354,0.0001100075],"domain_scores_gemma":[0.9953097,0.002554007,0.0007822111,0.00043717,0.0005974973,0.0003193491],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0006292972,0.0001637738,0.6306611,0.0009209382,0.0001740318,0.002243927,0.00575052,0.01788731,0.103488,0.01316205,0.0008692301,0.2240497],"study_design_scores_gemma":[0.00007397529,0.0006715763,0.6873099,0.0003491422,0.0004466458,0.003590589,0.01271484,0.1885008,0.04788918,0.03979231,0.01846246,0.0001986431],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9413951,0.0007687051,0.05579386,0.0001243713,0.000008600529,0.00006890558,0.0005007744,0.0001044754,0.001235106],"genre_scores_gemma":[0.9291884,0.0002058188,0.06937951,0.00003349298,0.000008354499,0.00002896097,0.0009843695,0.0000311148,0.000140011],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003177496,"threshold_uncertainty_score":0.0118103,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3174054661","doi":"10.1007/s13225-021-00476-8","title":"Phylogenomic reconstruction addressing the Peltigeralean backbone (Lecanoromycetes, Ascomycota)","year":2021,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Royal British Columbia Museum","funders":"Vetenskapsrådet; National Science Foundation","keywords":"Biology; Phylogenetic tree; Phylogenetics; Coalescent theory; Evolutionary biology; Phylogenomics; Nuclear gene; Mitochondrial DNA; Ribosomal DNA; Computational biology; Clade; Genetics; Gene","authors":[{"name":"Todd J. Widhelm","is_ca":false},{"name":"Felix Grewe","is_ca":false},{"name":"Bernard Goffinet","is_ca":false},{"name":"Mats Wedin","is_ca":false},{"name":"Trevor Goward","is_ca":true},{"name":"Luis Fernando Coca","is_ca":false},{"name":"Isabel Distefano","is_ca":false},{"name":"Alica Košuthová","is_ca":false},{"name":"H. Thorsten Lumbsch","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06062663862793054,"gpt":0.2131229941344754,"spread":0.1524963555065448,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004921413,0.0003383003,0.0004422105,0.001698301,0.0004440313,0.0008459867,0.0002843178,0.000375804,0.001445419],"category_scores_gemma":[0.001965274,0.0001996661,0.0006286163,0.001229876,0.0001685617,0.0006839696,0.0005940455,0.0005059316,0.0005155288],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000238187,"about_ca_system_score_gemma":0.0003068004,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006638878,"about_ca_topic_score_gemma":0.001102294,"domain_scores_codex":[0.9997639,0.00004808983,0.00002076203,0.00009996026,0.000034285,0.00003300086],"domain_scores_gemma":[0.9993987,0.0002113692,0.0001278865,0.00008756836,0.0001000726,0.0000744],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001278173,0.0001503753,0.2011349,0.0007509009,0.0006064015,0.001005441,0.001847979,0.01905896,0.6712276,0.003299691,0.001013738,0.09862588],"study_design_scores_gemma":[0.00008096216,0.0003820123,0.7310683,0.0001807155,0.0007602703,0.002639626,0.001730577,0.1676154,0.06965578,0.006721518,0.01907281,0.00009209787],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9772866,0.0004997528,0.01800407,0.00005651112,0.000006169181,0.000016275,0.003330224,0.0002189344,0.000581437],"genre_scores_gemma":[0.9626848,0.0003390589,0.02408946,0.00002587282,0.000008276283,0.00002733603,0.01239105,0.00009961843,0.0003345245],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001698301,"threshold_uncertainty_score":0.004835367,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W7089623098","doi":"10.1007/s13225-025-00565-y","title":"Genomic evolution and diversity in Botryosphaeriales: insights from pan-genomic and population genetic analyses of representative species","year":2025,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Scientific Research and Technology","field":"Computer Science","cited_by":3,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China","keywords":"Horizontal gene transfer; Comparative genomics; Genetic diversity; Genome; Effector; Convergent evolution; Gene; Population; Natural selection; Host (biology); Genomics","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.05025752115279871,"gpt":0.2879083482852948,"spread":0.2376508271324961,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005398101,0.0002754233,0.0003428148,0.001880298,0.0003427075,0.0005803978,0.0002663417,0.0003472945,0.0009157595],"category_scores_gemma":[0.0007181304,0.0001953459,0.0004189805,0.001404375,0.0002513391,0.0003030557,0.0006592312,0.0003910949,0.0002162894],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002852543,"about_ca_system_score_gemma":0.0001928739,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001047483,"about_ca_topic_score_gemma":0.002423144,"domain_scores_codex":[0.9997411,0.00002884052,0.00001848718,0.0001325843,0.00004458259,0.00003435351],"domain_scores_gemma":[0.9996043,0.0001173672,0.00009737237,0.0000551128,0.00006398265,0.00006186461],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002920129,0.00006824328,0.08696077,0.0002785788,0.0004162224,0.0003287537,0.0008347434,0.002474282,0.8738328,0.0008705708,0.0002013905,0.0334417],"study_design_scores_gemma":[0.00003078992,0.0001830238,0.9557173,0.00006045387,0.0003130331,0.001138482,0.0005517537,0.00747648,0.02392332,0.001133464,0.009437089,0.00003475522],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907507,0.0006479114,0.006154169,0.00003351999,0.000004921051,0.00001669771,0.001589521,0.0000569622,0.00074566],"genre_scores_gemma":[0.9877126,0.0004760737,0.00710741,0.00003415728,0.000006793166,0.00001941978,0.004300143,0.00003860707,0.0003048003],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001880298,"threshold_uncertainty_score":0.00306356,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3178354191","doi":"10.1007/s13225-021-00478-6","title":"Correction to: The evolving species concepts used for yeasts: from phenotypes and genomes to speciation networks","year":2021,"lang":"en","type":"article","venue":"Fungal Diversity","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"","keywords":"Genetic algorithm; Biology; Evolutionary biology; Phenotype; Genome; Mycology; Computational biology; Genetics; Paleontology; Gene","authors":[{"name":"Teun Boekhout","is_ca":false},{"name":"M. Catherine Aime","is_ca":false},{"name":"Dominik Begerow","is_ca":false},{"name":"Toni Gabaldón","is_ca":false},{"name":"Joseph Heitman","is_ca":false},{"name":"Martin Kemler","is_ca":false},{"name":"Kantarawee Khayhan","is_ca":false},{"name":"Marc‐André Lachance","is_ca":true},{"name":"Edward J. Louis","is_ca":false},{"name":"Sheng Sun","is_ca":false},{"name":"Duong Vu","is_ca":false},{"name":"Andrey Yurkov","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01279149823608377,"gpt":0.2286210275320547,"spread":0.2158295292959709,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004528008,0.002035083,0.001493914,0.003532649,0.003712226,0.005726882,0.002886758,0.004139423,0.09367713],"category_scores_gemma":[0.08848172,0.001046536,0.001623674,0.003958307,0.003555182,0.003423179,0.002634218,0.009908841,0.04702003],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004326214,"about_ca_system_score_gemma":0.005995116,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01187883,"about_ca_topic_score_gemma":0.009496037,"domain_scores_codex":[0.9945261,0.001020515,0.0009821752,0.0007837128,0.002344531,0.0003429313],"domain_scores_gemma":[0.9401408,0.01823327,0.003104994,0.004255318,0.03244398,0.001821668],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005670126,0.000006419437,0.0001124088,0.000256348,0.00001851158,0.0003033016,0.0001802906,0.0001431114,0.0002830157,0.005058938,0.9836487,0.009932182],"study_design_scores_gemma":[0.00002865646,0.00001571741,0.0004409546,0.0002810529,0.00003013476,0.0007911876,0.0001411815,0.0003271149,0.0006616186,0.003320358,0.9939142,0.00004775687],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"editorial","genre_gemma":"other","genre_scores_codex":[0.000851021,0.001324662,0.01004514,0.0547676,0.9200259,0.00003918452,0.005064444,0.002281578,0.005600412],"genre_scores_gemma":[0.07380459,0.0165464,0.06213519,0.08850347,0.2687786,0.0004567238,0.02315464,0.02617534,0.440445],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.09367713,"threshold_uncertainty_score":0.3133813,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}