{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":66,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":66,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"ba89e8f42ca6","filters":{"venue":"Gene Expression Patterns"}},"results":[{"id":"W2023895471","doi":"10.1016/s1567-133x(03)00066-8","title":"Cyp26C1 encodes a novel retinoic acid-metabolizing enzyme expressed in the hindbrain, inner ear, first branchial arch and tooth buds during murine development","year":2003,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Retinoids in leukemia and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":151,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Rhombomere; Hindbrain; Mesenchyme; Retinoic acid; Biology; Branchial arch; Morphogenesis; Inner ear; Anatomy; Cell biology; Endocrinology; Embryo; Genetics; Gene expression; Gene; Hox gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01059471551398409,"gpt":0.2270978391904999,"spread":0.2165031236765159,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004449604,0.0003137618,0.0002317954,0.00008645402,0.0002861373,0.00008213404,0.0003941293,0.0002016355,0.00004477361],"category_scores_gemma":[0.0001614,0.0002354671,0.00006383546,0.0001254854,0.00007317084,0.00001655268,0.000244804,0.0002473914,0.000002978248],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002227387,"about_ca_system_score_gemma":0.000111895,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002068484,"about_ca_topic_score_gemma":0.00004030805,"domain_scores_codex":[0.9979887,0.0001577157,0.0004126239,0.0006516054,0.0003132073,0.0004761205],"domain_scores_gemma":[0.999195,0.00003352443,0.000131044,0.000492377,0.00005170521,0.00009638201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006341918,0.0000989921,0.02714567,0.0001232582,0.00001481284,0.00001478339,0.001539911,0.00006360199,0.9704757,0.000009546077,0.0001372954,0.000313019],"study_design_scores_gemma":[0.001380957,0.00004878672,0.01562289,0.0001323342,0.000007605191,0.00005838346,0.0003380897,0.000007019755,0.9654384,0.00001423505,0.01662746,0.0003238969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9909281,0.001732472,0.006449089,0.00007614835,0.0001451468,0.0002676497,0.00001784651,0.00001703897,0.0003665233],"genre_scores_gemma":[0.9947228,0.0004415998,0.003777751,0.0002595008,0.0002490447,0.0001507921,0.00006996963,0.00003996039,0.0002885877],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01649016,"threshold_uncertainty_score":0.9602069,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2164344516","doi":"10.1016/j.gep.2013.06.003","title":"Expression of NOL1/NOP2/sun domain (Nsun) RNA methyltransferase family genes in early mouse embryogenesis","year":2013,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":124,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; SickKids Foundation; Heart and Stroke Foundation; Hospital for Sick Children","funders":"","keywords":"Biology; Gene; Genetics; Transcriptome; Embryogenesis; Gastrulation; Neural development; RNA; Cell biology; Morphogenesis; Methyltransferase; Gene expression; Methylation","retraction":null,"screen_n_in":null,"score":{"opus":0.01213606064720148,"gpt":0.2408845231698014,"spread":0.2287484625225999,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001629433,0.000273345,0.0002840097,0.0001383665,0.00008237825,0.00003421306,0.0004114813,0.0002551161,0.0001899063],"category_scores_gemma":[0.00001373386,0.0002355919,0.0001501168,0.0001293854,0.00005843024,0.00002285175,0.0001416626,0.0001105828,0.00002792705],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002087556,"about_ca_system_score_gemma":0.00005892685,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000504163,"about_ca_topic_score_gemma":0.0000255732,"domain_scores_codex":[0.9980859,0.0001793567,0.0005115595,0.0005883611,0.0002700103,0.0003648369],"domain_scores_gemma":[0.9987276,0.00001601811,0.0001497556,0.0008280366,0.0001292015,0.0001493586],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006263055,0.0001449653,0.01272221,0.00003244934,0.0000143024,0.000002604048,0.0001437038,0.000156566,0.9807822,0.000003561378,0.0008257155,0.005109048],"study_design_scores_gemma":[0.0008021184,0.0001120052,0.02537736,0.00006707143,0.000008061499,0.000001906668,0.0002371296,0.00001243962,0.9719173,0.00003174962,0.001152518,0.000280396],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9791452,0.001857021,0.0180341,0.00006614692,0.0001435526,0.0004060836,0.0001254201,0.00001781417,0.0002046692],"genre_scores_gemma":[0.9932327,0.001354572,0.003560526,0.0001629295,0.0001383153,0.0003386718,0.0001373992,0.00005174441,0.001023169],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01447358,"threshold_uncertainty_score":0.9607159,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2017331347","doi":"10.1016/s1567-133x(03)00113-3","title":"Prader–Willi syndrome transcripts are expressed in phenotypically significant regions of the developing mouse brain","year":2003,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Forebrain; Phenotype; Gene; Genetics; Candidate gene; Genomic imprinting; Hindbrain; Gene expression; Endocrinology; Central nervous system; DNA methylation","retraction":null,"screen_n_in":null,"score":{"opus":0.0187838119721884,"gpt":0.2343702923868637,"spread":0.2155864804146753,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002051642,0.0002092541,0.0002331657,0.00005446461,0.00009093522,0.00001859611,0.0003869768,0.0001712173,0.0000318181],"category_scores_gemma":[0.000169861,0.0001606009,0.0001293937,0.0001306901,0.00005559542,0.00000555998,0.0001235093,0.0001373883,0.000002177462],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001602581,"about_ca_system_score_gemma":0.00009261657,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002173112,"about_ca_topic_score_gemma":0.00002384166,"domain_scores_codex":[0.998309,0.0002417154,0.0004258335,0.000455359,0.0002158874,0.0003522139],"domain_scores_gemma":[0.9989957,0.00002412664,0.0002070209,0.0006428926,0.00005296974,0.00007734475],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000002434849,0.00006304392,0.06913438,0.00004234261,0.0000134717,0.000001877603,0.0001642873,0.0001477304,0.9298798,0.00002904734,0.0003858312,0.0001357005],"study_design_scores_gemma":[0.000568986,0.00005007706,0.1946009,0.0001876201,0.000005390954,0.00003106662,0.0002968188,0.000006887617,0.8011417,0.00006904142,0.002839008,0.0002024827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9774455,0.000178128,0.02121313,0.0005517922,0.0001745998,0.0003106352,0.00003400769,0.0000095555,0.00008270096],"genre_scores_gemma":[0.9962519,0.00007485181,0.002759742,0.0003730773,0.00002582095,0.00004693641,0.00001450895,0.00003472147,0.0004184623],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1287381,"threshold_uncertainty_score":0.6549115,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2012409410","doi":"10.1016/j.modgep.2004.04.007","title":"Expression of Hairy/Enhancer of Split genes, Hes1 and Hes5, during murine nephron morphogenesis","year":2004,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"St. Michael's Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"Hospital for Sick Children","keywords":"HES1; Enhancer; Biology; Morphogenesis; Cell biology; Nephron; Gene; Gene expression; Genetics; Notch signaling pathway; Signal transduction; Kidney","retraction":null,"screen_n_in":null,"score":{"opus":0.005080873915197867,"gpt":0.2143744404618678,"spread":0.2092935665466699,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006183922,0.0002013245,0.000243764,0.00006263378,0.00006735162,0.000006625671,0.0001687819,0.0002046461,0.00005793696],"category_scores_gemma":[0.000006957382,0.0001585229,0.0001086746,0.00006496275,0.00007842779,0.000008554533,0.000215904,0.00007531647,0.000002073203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001869811,"about_ca_system_score_gemma":0.00004725817,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001076942,"about_ca_topic_score_gemma":0.000007893941,"domain_scores_codex":[0.9987812,0.00003576888,0.0003486521,0.0004044841,0.0002022816,0.0002276196],"domain_scores_gemma":[0.9992172,0.00000468737,0.0002151869,0.0003938004,0.00006232921,0.0001068384],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002477743,0.00006521561,0.00432753,0.0001898351,0.00003085869,0.000006716982,0.00009067156,0.001025777,0.9929238,0.000002013961,0.0001098558,0.0009799593],"study_design_scores_gemma":[0.001162105,0.0001423245,0.01061991,0.0003784971,0.00001974939,0.00002148196,0.00005972011,0.000003386449,0.9867263,0.0000182854,0.0006618748,0.0001863949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936821,0.00424434,0.001591361,0.00003421863,0.0001651815,0.0001521091,0.00005726918,0.00001043225,0.00006291286],"genre_scores_gemma":[0.9941829,0.003869095,0.001323345,0.00003175149,0.0001346166,0.00002284286,0.00006370193,0.00002917104,0.0003425202],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006292379,"threshold_uncertainty_score":0.6464376,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2034725606","doi":"10.1016/s1567-133x(01)00005-9","title":"A molecular explanation of interactions between photic and non-photic circadian clock-resetting stimuli","year":2001,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":70,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Photic zone; Photic Stimulation; Suprachiasmatic nucleus; Circadian rhythm; Biology; Neuroscience; Period (music); Circadian clock; Light effects on circadian rhythm; CLOCK; Visual perception; Physics","retraction":null,"screen_n_in":null,"score":{"opus":0.03422130948019135,"gpt":0.2928018204409552,"spread":0.2585805109607638,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001085389,0.000165767,0.00020984,0.0002306096,0.0001437694,0.00004426459,0.0001635751,0.00007597254,0.0001530111],"category_scores_gemma":[0.0001622697,0.0001657594,0.00006567266,0.000206254,0.00004745964,0.0002242703,0.00009536694,0.0001983132,0.00003157481],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003413554,"about_ca_system_score_gemma":0.00002867635,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005754983,"about_ca_topic_score_gemma":0.000006448421,"domain_scores_codex":[0.9985524,0.0001029602,0.0003316478,0.0004354212,0.000271827,0.0003057259],"domain_scores_gemma":[0.9990637,0.0002049441,0.000175606,0.0003218958,0.00003292352,0.0002009307],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001049656,0.00003386949,0.07460991,0.00002669661,0.000004426656,0.00007440806,0.0006559204,0.0001224996,0.922078,0.00003104244,0.00009056366,0.002262156],"study_design_scores_gemma":[0.0004841518,0.00003892094,0.0684043,0.000188502,0.00001779013,0.00006565884,0.0001151679,0.0007965079,0.929195,0.00005070896,0.0004789662,0.0001642663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874094,0.00008332797,0.01120357,0.0001861027,0.00023727,0.0002365931,0.00006125901,0.0000413081,0.0005412046],"genre_scores_gemma":[0.9991838,0.00005908843,0.000205994,0.0002267339,0.0001176572,0.00002297499,0.00001979267,0.00002772494,0.0001362814],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01177439,"threshold_uncertainty_score":0.6759472,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1979511899","doi":"10.1016/j.modgep.2006.07.007","title":"Tissue, cellular and sub-cellular localization of the Vangl2 protein during embryonic development: Effect of the Lp mutation","year":2006,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Neural tube; Biology; Cell biology; Neurulation; Gastrulation; Mesenchyme; Convergent extension; Neural plate; Anatomy; Immunocytochemistry; Embryogenesis; Neural fold; Embryo; Molecular biology; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.003038282468393359,"gpt":0.1907097679866535,"spread":0.1876714855182602,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000153603,0.000132656,0.0001166622,0.00002368515,0.0001256251,0.00000973997,0.0001821638,0.0001024729,0.00001503141],"category_scores_gemma":[0.00001582899,0.00008199815,0.00004717529,0.00008327064,0.00005166838,0.000004913082,0.0001721552,0.00005134536,8.426536e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001360685,"about_ca_system_score_gemma":0.00004295017,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001538179,"about_ca_topic_score_gemma":0.000009552617,"domain_scores_codex":[0.9990791,0.0001208134,0.000239558,0.0002182572,0.0002084378,0.0001338205],"domain_scores_gemma":[0.9994659,0.000006504021,0.0002088232,0.0002462871,0.00005351734,0.0000190033],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003474194,0.00001560861,0.03312341,0.0001368754,0.00001180457,6.72067e-7,0.00007262775,0.0004093175,0.9657111,9.700809e-7,0.00007963394,0.0004032142],"study_design_scores_gemma":[0.0004923535,0.00003451042,0.01477893,0.0001838063,0.00001318344,0.000001890726,0.000009304118,0.00002059956,0.9838742,0.00001193732,0.0004742818,0.0001050269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897289,0.0007138697,0.008995199,0.00001719813,0.0001182872,0.0003850704,0.000006202426,0.000005648184,0.00002963138],"genre_scores_gemma":[0.998969,0.0000118907,0.0001330499,0.00001034509,0.00006881054,0.00004750298,0.00006117783,0.00001797732,0.0006802538],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01834448,"threshold_uncertainty_score":0.3343787,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1997094167","doi":"10.1016/j.modgep.2007.09.005","title":"The PcG gene Sfmbt2 is paternally expressed in extraembryonic tissues","year":2007,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University; University of Toronto","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Research Resources","keywords":"Biology; Genomic imprinting; Genetics; Gene; Imprinting (psychology); Trophoblast; Embryo; CpG site; Placenta; DNA methylation; Gene expression; Fetus","retraction":null,"screen_n_in":null,"score":{"opus":0.01176749455415954,"gpt":0.2619619453807157,"spread":0.2501944508265561,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005172054,0.0002405142,0.0001699531,0.00005803557,0.0001681882,0.00007344937,0.0005164698,0.0001834264,0.0001201022],"category_scores_gemma":[0.00003931188,0.000180355,0.0001096928,0.00007805815,0.00004333229,0.0000059297,0.0003540539,0.0001448228,0.00003169991],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000167424,"about_ca_system_score_gemma":0.00003585927,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008825791,"about_ca_topic_score_gemma":0.00007633309,"domain_scores_codex":[0.998055,0.00007119332,0.000460124,0.0005338123,0.0002691006,0.0006107354],"domain_scores_gemma":[0.9988985,0.00003014453,0.0001474974,0.0007348389,0.00005702694,0.0001319834],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002111442,0.00003666065,0.05248974,0.000008937463,0.00001396701,0.0000136652,0.0001888091,0.00001578382,0.9334656,9.569249e-7,0.001255366,0.01248937],"study_design_scores_gemma":[0.0004927528,0.00008183017,0.1285402,0.0000482448,0.000004487693,0.00002863674,0.0001441576,0.00002242553,0.8472921,0.00003736636,0.0230945,0.0002132696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9870335,0.001758723,0.009977069,0.0001551053,0.0004040196,0.0002099037,0.00002285957,0.00001646888,0.0004223172],"genre_scores_gemma":[0.9945705,0.001009293,0.001451026,0.0003576513,0.0003546342,0.00002854655,0.00004193675,0.00004337266,0.002143054],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08617354,"threshold_uncertainty_score":0.7354661,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2080581227","doi":"10.1016/j.modgep.2005.07.005","title":"SAGE reveals expression of Wnt signalling pathway members during mouse prostate development","year":2005,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research; Genome British Columbia; Michael Smith Health Research BC; National Cancer Institute; Genome Canada","keywords":"Wnt signaling pathway; Biology; Prostate; Frizzled; WNT4; In situ hybridization; Signal transduction; Gene expression; LRP6; Cell biology; Gene; Cancer research; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.00823053324431206,"gpt":0.2279740398054361,"spread":0.219743506561124,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001990784,0.0002496253,0.0002151419,0.00008720389,0.0001333371,0.00001899697,0.000205118,0.0002115008,0.0001389223],"category_scores_gemma":[0.00001999375,0.0002331223,0.0001004134,0.00007045801,0.00002682705,0.0000160405,0.0002349032,0.0001114703,0.000009278559],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006954305,"about_ca_system_score_gemma":0.00007843662,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007756163,"about_ca_topic_score_gemma":0.00001625445,"domain_scores_codex":[0.9981677,0.00008583203,0.0005515653,0.0005228283,0.0003313767,0.0003406853],"domain_scores_gemma":[0.9990463,0.000008793192,0.0003226449,0.0004074503,0.00008320361,0.0001315848],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001368738,0.0000652512,0.002285993,0.00007171043,0.0000202132,0.000001949067,0.0004819999,0.01101026,0.9812415,2.282496e-7,0.000228222,0.004455857],"study_design_scores_gemma":[0.0008038594,0.00004985854,0.002612246,0.0003206494,0.000007225118,0.000006521352,0.00006463388,0.00004950883,0.9931584,0.000002679768,0.002640551,0.0002838436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923503,0.0006349261,0.006371368,0.00004114661,0.0001191666,0.0003513046,0.0000407432,0.00003293515,0.00005814436],"genre_scores_gemma":[0.9912062,0.000205523,0.005836037,0.00003932789,0.0003173835,0.00006952673,0.0002349162,0.00005337303,0.002037729],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01191698,"threshold_uncertainty_score":0.9506451,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2000263642","doi":"10.1016/j.modgep.2004.01.010","title":"Differential expression of duplicated genes for brain-type fatty acid-binding proteins (fabp7a and fabp7b) during early development of the CNS in zebrafish (Danio rerio)","year":2004,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Centre National de la Recherche Scientifique; Killam Trusts; Institut National de la Santé et de la Recherche Médicale; Canadian Institutes of Health Research; National Institute for Health and Care Research","keywords":"Zebrafish; Biology; Gene; Danio; Exon; Complementary DNA; Gene expression; Molecular biology; Genetics; In situ hybridization","retraction":null,"screen_n_in":null,"score":{"opus":0.01160235490740725,"gpt":0.2370283094466613,"spread":0.225425954539254,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001046215,0.0002436586,0.0002706253,0.00008935397,0.0001547756,0.00001864279,0.0003118273,0.0002487448,0.00001844384],"category_scores_gemma":[0.00007044168,0.0001829622,0.00008298572,0.0001223497,0.00006309259,0.00001536748,0.0004373862,0.0001289666,5.273087e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004100048,"about_ca_system_score_gemma":0.0001098579,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001659137,"about_ca_topic_score_gemma":0.00001768508,"domain_scores_codex":[0.9984362,0.0000736018,0.0004873719,0.0004780507,0.0002136077,0.0003111721],"domain_scores_gemma":[0.9991168,0.00001088256,0.0003022779,0.0003945065,0.00009168553,0.00008383503],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002498199,0.0001168422,0.0447657,0.0001239121,0.00002265322,5.285364e-7,0.0005984974,0.00003564692,0.9537442,5.989402e-7,0.00001170578,0.0003298965],"study_design_scores_gemma":[0.001580997,0.000105552,0.06148784,0.0003584017,0.000006039811,0.000003462197,0.00009088357,0.000002462235,0.9360924,0.000007381032,0.00006392936,0.0002006545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934352,0.0001169795,0.005392493,0.00005268213,0.0001606102,0.0007692878,0.00005571409,0.00001325317,0.000003804706],"genre_scores_gemma":[0.9963292,0.00003115015,0.003262886,0.0000199669,0.0000786806,0.0001325224,0.00007518788,0.00004087833,0.00002951332],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0176518,"threshold_uncertainty_score":0.7460982,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2095296535","doi":"10.1016/j.modgep.2006.03.001","title":"Expression of the δ-protocadherin gene Pcdh19 in the developing mouse embryo","year":2006,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research; Terry Fox Foundation; Canada Research Chairs","keywords":"Protocadherin; Biology; Neural tube; Neuroepithelial cell; Cell biology; Mesonephros; Kidney development; Organogenesis; Embryo; Hindbrain; Otic vesicle; Forebrain; Neuroectoderm; Embryogenesis; Zebrafish; Cadherin; Gene; Embryonic stem cell; Genetics; Gene expression; In situ hybridization; Mesoderm; Endocrinology; Central nervous system","retraction":null,"screen_n_in":null,"score":{"opus":0.00924102626119058,"gpt":0.2354563795344312,"spread":0.2262153532732406,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001527154,0.0001511851,0.000117878,0.00002826977,0.00009475295,0.00001470745,0.0004609166,0.0001685445,0.00001732474],"category_scores_gemma":[0.0000108642,0.00007789274,0.0001000886,0.0001012715,0.00004746834,0.000004141159,0.0001945706,0.0001464068,0.000003861542],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001629069,"about_ca_system_score_gemma":0.00005347675,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001055642,"about_ca_topic_score_gemma":0.00002766355,"domain_scores_codex":[0.998848,0.0001500831,0.0002864486,0.0002751219,0.0002224377,0.0002179703],"domain_scores_gemma":[0.9993106,0.000009620283,0.0001453861,0.0004791096,0.00003218048,0.00002313255],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003869287,0.00003269864,0.008901588,0.00002164799,0.000004205383,0.000002603702,0.00006886601,0.0008389319,0.9874924,0.000004113097,0.002365216,0.0002289841],"study_design_scores_gemma":[0.0004096129,0.00003223956,0.01221992,0.0001248363,0.00000388116,0.000009233208,0.00008168192,0.000009073968,0.9831421,0.00003693965,0.003804861,0.0001256106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961698,0.0003723846,0.002275129,0.0001826868,0.0001435987,0.0004748933,0.00002456558,0.000006481289,0.0003504303],"genre_scores_gemma":[0.9979424,0.0001514762,0.0004761405,0.0002897671,0.0001942067,0.0001427836,0.00004357613,0.00001857973,0.000741036],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004350344,"threshold_uncertainty_score":0.3176374,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2028902669","doi":"10.1016/j.modgep.2004.10.009","title":"Gene expression pattern of Claudin-1 during chick embryogenesis","year":2005,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":39,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Directorate for Biological Sciences","keywords":"Biology; Claudin; Ectoderm; Endoderm; Otic vesicle; Apical ectodermal ridge; Cell biology; Mesoderm; Neural tube; Anatomy; Neural fold; Tight junction; Embryogenesis; Embryo; Embryonic stem cell; Neural plate; In situ hybridization; Gene expression; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02352225267394229,"gpt":0.2527538614297595,"spread":0.2292316087558172,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001048067,0.0003584996,0.0004101033,0.000189407,0.0004071144,0.00003993427,0.0004440391,0.0001622907,0.0009603676],"category_scores_gemma":[0.0000751649,0.0002886047,0.0001876576,0.0002040313,0.00008545405,0.0002941522,0.0004706153,0.0002252846,0.00009367431],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003963252,"about_ca_system_score_gemma":0.00002227641,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001913759,"about_ca_topic_score_gemma":0.000007497939,"domain_scores_codex":[0.9973189,0.0001654858,0.0005943608,0.000816676,0.0006144824,0.0004900952],"domain_scores_gemma":[0.9985598,0.00009141703,0.0003433278,0.0007517166,0.00006758944,0.0001861349],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006191619,0.0000640108,0.02323625,0.00004758457,0.000008161059,0.00001152659,0.0006341325,0.0001197798,0.9688634,0.000001220667,0.001294502,0.005657547],"study_design_scores_gemma":[0.0007604866,0.00004205978,0.02851929,0.0001050482,0.00001643491,0.00003754533,0.0001060179,0.00002503868,0.9684854,0.00001371455,0.001582504,0.0003064665],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9898911,0.0002626505,0.007768263,0.0002061116,0.0008241243,0.000226658,0.0001600405,0.0001452418,0.000515887],"genre_scores_gemma":[0.9960254,0.0002784779,0.0008849031,0.0006531669,0.000705712,0.00005630779,0.000009881273,0.00005298735,0.001333114],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00688336,"threshold_uncertainty_score":0.9999566,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2055625072","doi":"10.1016/j.modgep.2004.09.010","title":"Differential expression of the duplicated cellular retinoic acid-binding protein 2 genes (crabp2a and crabp2b) during zebrafish embryonic development","year":2004,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Retinoids in leukemia and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"","keywords":"Zebrafish; Retinoic acid; Biology; Embryogenesis; Gene; Cell biology; Embryonic stem cell; Gene expression; In situ hybridization; Genetics; Molecular biology","retraction":null,"screen_n_in":null,"score":{"opus":0.006811893549989426,"gpt":0.2057033287831832,"spread":0.1988914352331938,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001026853,0.000312888,0.0002411631,0.00005628265,0.0003467885,0.00004367593,0.000473092,0.0002718081,0.00005153096],"category_scores_gemma":[0.00003771644,0.0002270768,0.0001118805,0.00009843245,0.00009983184,0.00001262283,0.0006994354,0.0001868768,0.000003950704],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004116473,"about_ca_system_score_gemma":0.0001314384,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006450867,"about_ca_topic_score_gemma":0.00000356371,"domain_scores_codex":[0.9981373,0.00009653718,0.0004154443,0.0006349747,0.0003372899,0.0003784877],"domain_scores_gemma":[0.9988872,0.000005157621,0.0002972714,0.0006158039,0.00007863519,0.0001158717],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006719626,0.00006970901,0.006858036,0.0002173359,0.00001868923,0.000004834904,0.0001519255,0.00003467693,0.9923187,0.000001734032,0.00002407818,0.0002330491],"study_design_scores_gemma":[0.001095994,0.0000542876,0.004111702,0.0004597869,0.00001522987,0.00001664587,0.00008307344,0.000002531165,0.9935356,0.00002088322,0.0003069808,0.0002972214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937831,0.0008334626,0.004648045,0.00005372428,0.0001666672,0.0004360319,0.00001681631,0.00002739102,0.00003473131],"genre_scores_gemma":[0.9977087,0.000137525,0.001068782,0.0000202885,0.0001697251,0.0001100436,0.00009603829,0.00004910567,0.0006397467],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003925615,"threshold_uncertainty_score":0.9259923,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2016958041","doi":"10.1016/j.modgep.2006.04.003","title":"Identification of genes expressed in retinal progenitor/stem cell colonies isolated from the ocular ciliary body of adult mice","year":2006,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Fonds de Recherche du Québec - Santé","keywords":"Biology; PAX6; Progenitor cell; Cell biology; Stem cell; Ciliary body; Embryonic stem cell; Retinal pigment epithelium; Eye development; Retinal; In situ hybridization; Retina; Wnt signaling pathway; Molecular biology; Gene expression; Genetics; Transcription factor; Gene; Signal transduction","retraction":null,"screen_n_in":null,"score":{"opus":0.004455030248684031,"gpt":0.2080897971609614,"spread":0.2036347669122773,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001208593,0.0001464184,0.0001564946,0.00003787434,0.00004586605,0.00001356034,0.0002855492,0.0001365325,0.00001487622],"category_scores_gemma":[0.00001237265,0.000115807,0.00007811411,0.00008379638,0.0000523966,0.000007356805,0.0001100917,0.00006009417,0.000002687003],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007048505,"about_ca_system_score_gemma":0.0000429098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003174557,"about_ca_topic_score_gemma":0.00004343449,"domain_scores_codex":[0.9987006,0.0001302489,0.0004987551,0.0003099992,0.0002011646,0.0001592871],"domain_scores_gemma":[0.9991661,0.00002313107,0.0003081257,0.0003395342,0.0001393183,0.00002378641],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000163351,0.00008988168,0.2015993,0.00003477565,0.000009110948,0.00000155327,0.000118281,0.00005173582,0.7970673,9.235738e-7,0.0007506445,0.0001131136],"study_design_scores_gemma":[0.000492632,0.00005296582,0.06203442,0.00006624508,0.00001268992,6.395931e-7,0.0002911023,0.00006522613,0.9365359,0.00003068945,0.0002925454,0.0001249258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964476,0.001180394,0.001767969,0.00005804262,0.0001024693,0.0002688164,0.0001174562,0.000006820686,0.00005043989],"genre_scores_gemma":[0.998808,0.000275032,0.0002394438,0.00002885947,0.0000729721,0.00004635583,0.0003537738,0.00001623099,0.0001593632],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1395649,"threshold_uncertainty_score":0.4722472,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2006604518","doi":"10.1016/j.modgep.2004.10.002","title":"Pattern of expression of the podocalyxin gene in the mouse brain during development","year":2004,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Podocalyxin; Forebrain; Biology; In situ hybridization; Hippocampus; Cerebellum; Gene expression; Basal forebrain; Messenger RNA; Basal (medicine); Cell biology; Gene; Endocrinology; Internal medicine; Genetics; Central nervous system; Kidney; Podocyte; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01401288780591068,"gpt":0.253571154390243,"spread":0.2395582665843324,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002157006,0.0001820209,0.0002873873,0.0001030893,0.00008474365,0.000009174451,0.0003088377,0.00007977898,0.00007515951],"category_scores_gemma":[0.00005543653,0.00009350215,0.0001504719,0.0001670831,0.00005517206,0.00005840448,0.0002161562,0.0001772995,0.000004920213],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004709156,"about_ca_system_score_gemma":0.00009028959,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001244106,"about_ca_topic_score_gemma":0.00002343627,"domain_scores_codex":[0.9982386,0.0001243443,0.0005335145,0.0002589292,0.000597847,0.0002467879],"domain_scores_gemma":[0.9989813,0.00004388972,0.000226561,0.0006159417,0.00005329992,0.00007902184],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000906224,0.0002789001,0.1478138,0.0002753838,0.00000902161,0.00002550967,0.003077581,0.0002027043,0.8471236,0.00000104043,0.0001277952,0.000974113],"study_design_scores_gemma":[0.000977632,0.0000312547,0.3992296,0.0007901926,0.000007974933,0.00001289119,0.0003982424,0.000001820385,0.5984195,0.00001351152,0.0000521302,0.00006518161],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973765,0.0003482258,0.00107008,0.0006423108,0.00006932749,0.0003981148,0.00004301813,0.00001333775,0.0000390588],"genre_scores_gemma":[0.9987749,0.00007294135,0.0004243568,0.000444129,0.00006725237,0.00004505744,0.00002849069,0.00002128972,0.0001215903],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2514158,"threshold_uncertainty_score":0.3812907,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2093193103","doi":"10.1016/j.gep.2009.07.009","title":"Flrt2 and Flrt3 have overlapping and non-overlapping expression during craniofacial development","year":2009,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"dental development and anomalies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Neural crest; Mesenchyme; Biology; Craniofacial; Cranial neural crest; Anatomy; Ectoderm; Cell biology; Morphogenesis; Embryogenesis; Mesenchymal stem cell; Embryo; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.006925750754929916,"gpt":0.2214112954936033,"spread":0.2144855447386734,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008960347,0.0002560108,0.0001874895,0.00006769736,0.0003195218,0.00008635065,0.0001233484,0.0001487536,0.00002716068],"category_scores_gemma":[0.00001301943,0.0002355284,0.00004023096,0.00003066232,0.00003059996,0.0000228553,0.0003076242,0.00009022749,0.00000476495],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001570468,"about_ca_system_score_gemma":0.00002675519,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003475948,"about_ca_topic_score_gemma":0.000004201648,"domain_scores_codex":[0.9986697,0.00002674953,0.0002672518,0.0005234541,0.0001925681,0.0003202732],"domain_scores_gemma":[0.9995412,0.000004968596,0.00009419907,0.0001892562,0.00002696381,0.0001434074],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000406272,0.0000258036,0.09268547,0.00003201739,0.00001018273,0.000009867323,0.0004208987,0.000001911585,0.9025781,6.366711e-7,0.0001791457,0.004015307],"study_design_scores_gemma":[0.0005318671,0.00003240911,0.3871749,0.0001610278,0.000003092354,0.00001711323,0.0001549452,0.000005735521,0.6105934,0.000007968383,0.001091834,0.0002256763],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968125,0.000256467,0.002119126,0.00004313831,0.0001502734,0.000164988,0.000008363596,0.00002324961,0.0004219338],"genre_scores_gemma":[0.9956574,0.0002784781,0.002645747,0.0002187163,0.0002127004,0.00001612422,0.00008549574,0.00001973058,0.0008656408],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2944895,"threshold_uncertainty_score":0.9604571,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2029587765","doi":"10.1016/j.gep.2010.02.001","title":"Expression of two novel transcripts in the mouse definitive endoderm","year":2010,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research; Genome British Columbia; Michael Smith Health Research BC; Genome Canada","keywords":"Endoderm; Biology; Genetics; Cell biology; Expression (computer science); Molecular biology; Gene; Computational biology; Embryonic stem cell; Computer science; Programming language","retraction":null,"screen_n_in":null,"score":{"opus":0.01744098978624319,"gpt":0.2649697501827175,"spread":0.2475287603964743,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001768311,0.0001497807,0.0001202002,0.00005272926,0.000049922,0.00001424239,0.0003126309,0.0001316241,0.00006558387],"category_scores_gemma":[0.000040955,0.0001093256,0.00009202772,0.00005437544,0.00005072811,0.000007644755,0.0000789728,0.0001527749,0.000003015933],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004728838,"about_ca_system_score_gemma":0.00003561542,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003085558,"about_ca_topic_score_gemma":0.00007033475,"domain_scores_codex":[0.998958,0.00008727198,0.0002541073,0.0003086113,0.0001998453,0.0001921904],"domain_scores_gemma":[0.999226,0.0000201102,0.0001187567,0.0005277778,0.00005412316,0.00005322999],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005897969,0.0001723546,0.007838604,0.00001674311,0.000004291969,0.000002048449,0.0003178031,0.00003629418,0.9909649,0.00001521947,0.0003415749,0.0002311566],"study_design_scores_gemma":[0.001015574,0.00003698857,0.01861648,0.00003563945,0.000007228696,0.00001003545,0.0000986424,0.00001591236,0.9792621,0.00003349207,0.000741831,0.0001260865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9872582,0.00009392347,0.01185408,0.00004787029,0.0001245139,0.000248896,0.0001664962,0.000007481994,0.0001985348],"genre_scores_gemma":[0.9977564,0.00002238748,0.001504646,0.0001664469,0.0001479332,0.00005670603,0.0002805095,0.00002164147,0.00004328851],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01170284,"threshold_uncertainty_score":0.4458168,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2017447068","doi":"10.1016/j.gep.2012.12.001","title":"The expression of NOTCH2, HES1 and SOX9 during mouse retinal development","year":2012,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary; University of Victoria","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"HES1; Biology; Retina; Notch signaling pathway; Cell biology; Retinal; Progenitor cell; Cell fate determination; Muller glia; Neurogenesis; Embryonic stem cell; In situ hybridization; Retinal ganglion cell; Neuroscience; Gene expression; Signal transduction; Genetics; Stem cell; Gene; Transcription factor; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.00821437111002795,"gpt":0.2261652351397961,"spread":0.2179508640297682,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001928915,0.0001508129,0.0001052679,0.00002637054,0.0002405486,0.00001911488,0.0001622416,0.00009259597,0.00002165244],"category_scores_gemma":[0.00003248065,0.000102277,0.00003960178,0.00002788911,0.00004823212,0.000009127961,0.0003080718,0.00006515383,0.000005320529],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007436051,"about_ca_system_score_gemma":0.00002783094,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003423176,"about_ca_topic_score_gemma":0.000002897325,"domain_scores_codex":[0.9989807,0.00005553402,0.0002497228,0.000217383,0.0001923115,0.0003043775],"domain_scores_gemma":[0.9994673,0.00001352275,0.0001212529,0.0002504942,0.00003749214,0.000109977],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000098105,0.00003119342,0.1464285,0.00002726395,0.000006970472,4.07789e-7,0.0002641659,0.000001249865,0.8517275,0.000002482812,0.0006461503,0.0007660469],"study_design_scores_gemma":[0.0003302545,0.00002298197,0.07749703,0.0000491543,0.00000306757,0.000005905715,0.0002010283,5.613397e-7,0.9136392,0.000004028679,0.008105202,0.0001416194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976281,0.000965468,0.0008879426,0.0000450911,0.0001213469,0.000120876,0.000004882403,0.000009019092,0.000217291],"genre_scores_gemma":[0.996493,0.0004626363,0.001631497,0.00003769661,0.0001119009,0.00003035851,0.00004700784,0.00001829527,0.001167653],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06893146,"threshold_uncertainty_score":0.4170734,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2592695446","doi":"10.1016/j.gep.2017.03.001","title":"Temporal profiling of photoreceptor lineage gene expression during murine retinal development","year":2017,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; University of Calgary; University of Toronto; Alberta Children's Hospital; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research; Fondation Brain Canada","keywords":"Biology; Cell biology; Opsin; Retinal; Retina; Transcription factor; Peanut agglutinin; Outer nuclear layer; Gene expression; Recoverin; Inner nuclear layer; Molecular biology; Genetics; Gene; Rhodopsin; Neuroscience; Lectin","retraction":null,"screen_n_in":null,"score":{"opus":0.01411451067098438,"gpt":0.258584593219852,"spread":0.2444700825488676,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002084086,0.0002773535,0.0002434675,0.00006454867,0.0004293842,0.00005364879,0.0005442143,0.000179006,0.0001439861],"category_scores_gemma":[0.00007945159,0.0002410574,0.0001061704,0.00002508639,0.00006703306,0.00001751185,0.0006642764,0.0001152506,0.00001208378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001748416,"about_ca_system_score_gemma":0.00009980398,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001689838,"about_ca_topic_score_gemma":0.00000649324,"domain_scores_codex":[0.9982477,0.0000507894,0.000474342,0.0005535083,0.000322787,0.0003508441],"domain_scores_gemma":[0.9985728,0.000005547603,0.000451085,0.0007257278,0.0001045786,0.0001402508],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002213224,0.00006376028,0.2428829,0.00007010564,0.00001438616,0.000007635311,0.0001021713,0.000006030096,0.7560417,2.324266e-7,0.000273867,0.0003159275],"study_design_scores_gemma":[0.0009400046,0.00006644419,0.06895244,0.0002192371,0.000005531013,0.000006973938,0.0000750016,0.000004914565,0.9278452,0.000001952741,0.001581391,0.0003009457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955489,0.0001747567,0.003224571,0.00002605803,0.0003178869,0.0002759746,0.00002741441,0.00002049301,0.000383953],"genre_scores_gemma":[0.9673408,0.0001243442,0.03070061,0.00002674921,0.0002781884,0.00006257411,0.0004193336,0.0000399041,0.001007487],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1739304,"threshold_uncertainty_score":0.9830035,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2007051543","doi":"10.1016/s1567-133x(03)00032-2","title":"The chloride conductance channel ClC-K is a specific marker for the Xenopus pronephric distal tubule and duct","year":2003,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Alberta Heritage Foundation for Medical Research","keywords":"Pronephros; Xenopus; Biology; Duct (anatomy); Kidney development; Intermediate mesoderm; Cell biology; Chloride channel; Internal medicine; Mesoderm; Endocrinology; Anatomy; Molecular biology; Gene; Genetics; Embryonic stem cell","retraction":null,"screen_n_in":null,"score":{"opus":0.01143389735588887,"gpt":0.2305159245440654,"spread":0.2190820271881765,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001536147,0.000154182,0.00009438091,0.00001050786,0.0003797274,0.00005142982,0.0001761282,0.0001013112,0.00002591125],"category_scores_gemma":[0.00002146076,0.00007838983,0.0000772109,0.00004189755,0.00009307102,0.000004591397,0.00006387581,0.0001002127,0.000003660157],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009801443,"about_ca_system_score_gemma":0.00002898147,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005823341,"about_ca_topic_score_gemma":0.000003758719,"domain_scores_codex":[0.9990816,0.00004255651,0.00015722,0.0003332128,0.0001146206,0.0002708519],"domain_scores_gemma":[0.9994214,0.00003184279,0.00008083028,0.0003587347,0.00004256179,0.00006464905],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000227306,0.0000190596,0.0005774966,0.00001973193,0.00005944476,0.000002326213,0.0001346647,0.0000197363,0.973565,0.00002812585,0.02371194,0.001635119],"study_design_scores_gemma":[0.0004183979,0.00006413701,0.0005916774,0.00002207576,0.00001028351,0.00002523514,0.0001625901,0.00002001828,0.7590674,0.0001076389,0.2393877,0.0001227728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9795142,0.0137487,0.004101349,0.0008368982,0.0008210479,0.0005455556,0.0001006308,0.000009207693,0.0003223845],"genre_scores_gemma":[0.9880958,0.007015727,0.00008741392,0.0003542834,0.0003171368,0.0001816897,0.0000309387,0.00002416665,0.003892838],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2156758,"threshold_uncertainty_score":0.3196644,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2042209221","doi":"10.1016/j.modgep.2005.02.003","title":"Distinct patterns of expression of the RB gene family in mouse and human retina","year":2005,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Biology; Retina; Retinoblastoma; Embryonic stem cell; Gene family; Retinoblastoma protein; Giant retinal ganglion cells; Cell biology; Retinal; Muller glia; Gene; Progenitor cell; Molecular biology; Gene expression; Genetics; Retinal ganglion cell; Cell cycle; Stem cell; Neuroscience","retraction":null,"screen_n_in":null,"score":{"opus":0.01817602169877715,"gpt":0.2860531409291392,"spread":0.2678771192303621,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001411753,0.0001744936,0.0003536745,0.0000861943,0.00007210192,0.000003652852,0.0001410001,0.0001521721,0.0001092061],"category_scores_gemma":[0.00002440566,0.0001107199,0.00009251075,0.00006092783,0.00006566069,0.00005788744,0.0002107001,0.0001756094,0.000003134938],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004022953,"about_ca_system_score_gemma":0.000025356,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001493407,"about_ca_topic_score_gemma":0.00006000616,"domain_scores_codex":[0.9986894,0.0001367403,0.0004176315,0.0002970637,0.0002575739,0.0002015725],"domain_scores_gemma":[0.9990796,0.00003964503,0.0002305027,0.0005264357,0.00004170388,0.00008214601],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005453737,0.0002502181,0.4980817,0.00004682686,0.000008762658,0.0000127644,0.0002361071,0.000002285775,0.5006477,0.00000143075,0.00007628874,0.0005813101],"study_design_scores_gemma":[0.001375634,0.0001022357,0.4823116,0.000307744,0.00002228404,0.000007861319,0.00005643491,0.000004091076,0.5156561,0.000007381561,0.00009730834,0.00005128171],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987268,0.0002489259,0.0001355928,0.0001660063,0.00006900314,0.0003581493,0.00009683484,0.0000149815,0.0001837015],"genre_scores_gemma":[0.9985616,0.00006654244,0.0005225478,0.0001225597,0.00007821303,0.00002727762,0.00004806122,0.00002203073,0.0005511396],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0157701,"threshold_uncertainty_score":0.4515027,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2005764307","doi":"10.1016/j.gep.2013.04.006","title":"Spatiotemporal expression of Notch receptors and ligands in developing mouse placenta","year":2013,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates","keywords":"Notch signaling pathway; Trophoblast; Placentation; Biology; Decidua; Placenta; Cell biology; Receptor; Notch proteins; Cell fate determination; Internal medicine; Signal transduction; Endocrinology; Gene; Fetus; Genetics; Transcription factor; Pregnancy","retraction":null,"screen_n_in":null,"score":{"opus":0.008905371616931501,"gpt":0.2333994317761278,"spread":0.2244940601591963,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001069602,0.0001350313,0.0001370352,0.0000668951,0.00004619745,0.000009884938,0.0001013525,0.0001918129,0.00006215888],"category_scores_gemma":[0.00001745305,0.0001163175,0.00002649323,0.00004969359,0.00003697703,0.00001283365,0.0001843278,0.00005641078,0.000006093831],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001259114,"about_ca_system_score_gemma":0.00003095116,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005291817,"about_ca_topic_score_gemma":0.00002718851,"domain_scores_codex":[0.9991239,0.00004766178,0.0002692546,0.000299897,0.00009006481,0.0001692263],"domain_scores_gemma":[0.9996149,0.000008819441,0.0001112702,0.0001738778,0.00003729587,0.00005383574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002988133,0.00001806158,0.2603853,0.00001600117,0.000003247477,3.077338e-7,0.00009476633,0.000008282436,0.737307,9.049469e-7,0.0008097366,0.001326458],"study_design_scores_gemma":[0.0004078724,0.00004479238,0.1404586,0.00007458452,0.000001146214,0.000002712249,0.00008207357,0.00000990216,0.8582847,0.00001866863,0.0004822131,0.00013276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977602,0.0001504775,0.001578957,0.0001205222,0.0001289016,0.0002004188,0.000009362737,0.000007448749,0.00004367347],"genre_scores_gemma":[0.9952151,0.0002378074,0.003682449,0.0001093801,0.00004827309,0.0000349747,0.0002961766,0.00001290803,0.0003629562],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1209776,"threshold_uncertainty_score":0.4743292,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1972836307","doi":"10.1016/j.gep.2014.05.001","title":"MLLT11/AF1q is differentially expressed in maturing neurons during development","year":2014,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Nova Scotia Health Research Foundation; Plum Foundation","keywords":"Biology; Neural crest; Subplate; Central nervous system; Nervous system; In situ hybridization; Peripheral nervous system; Spinal cord; Forebrain; Anatomy; Neuroscience; Cell biology; Cerebral cortex; Embryo; Gene expression; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01919888009968609,"gpt":0.271223324028661,"spread":0.2520244439289749,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002197164,0.0003094662,0.0004134386,0.0003601486,0.0001538672,0.00005644863,0.0003453923,0.0001684562,0.0007865643],"category_scores_gemma":[0.00008438647,0.0002656246,0.0000782026,0.0001592773,0.0000307969,0.0001267033,0.00054167,0.0005679044,0.0001742798],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002465864,"about_ca_system_score_gemma":0.0001337743,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004190633,"about_ca_topic_score_gemma":0.00001342199,"domain_scores_codex":[0.9972937,0.0001425219,0.0005158211,0.0006668072,0.0006649305,0.0007162549],"domain_scores_gemma":[0.9986825,0.0000716318,0.0001059234,0.0007511674,0.00006156242,0.0003272386],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001810995,0.0001318747,0.09373041,0.0002261707,0.00001804821,0.0001132334,0.001168102,0.00001597002,0.9001324,0.000001459652,0.001062856,0.003218353],"study_design_scores_gemma":[0.002007571,0.00003671236,0.3568446,0.0004166203,0.000007168077,0.00002424626,0.00004735458,0.0001862503,0.638012,0.000008129747,0.002223811,0.0001855616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993898,0.0000369458,0.004060347,0.000636245,0.0001961506,0.0004238461,0.00001417552,0.0001219013,0.0006124065],"genre_scores_gemma":[0.993508,0.0000534434,0.003362232,0.0005504882,0.0002842836,0.0001155623,0.00005303809,0.00007766222,0.001995303],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2631142,"threshold_uncertainty_score":0.9999796,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2106671277","doi":"10.1016/j.gep.2011.08.004","title":"Muscle type-specific expression of Zasp52 isoforms in Drosophila","year":2011,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Cardiomyopathy and Myosin Studies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Gene isoform; PDZ domain; Biology; LIM domain; Cell biology; Drosophila (subgenus); Alternative splicing; Somatic cell; Myogenesis; Myocyte; Anatomy; Genetics; Gene; Transcription factor; Zinc finger","retraction":null,"screen_n_in":null,"score":{"opus":0.0501940542856974,"gpt":0.2655188489153567,"spread":0.2153247946296593,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001748835,0.0001884948,0.0004292396,0.0001736536,0.00005565618,0.000004797069,0.0001254806,0.0001262729,0.0006005989],"category_scores_gemma":[0.00002799527,0.0001403978,0.0001363458,0.0001800565,0.00005751905,0.0001000698,0.000197459,0.000177921,0.00003956248],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003138792,"about_ca_system_score_gemma":0.000022885,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003975422,"about_ca_topic_score_gemma":0.000003545996,"domain_scores_codex":[0.9986337,0.00004222989,0.0004022259,0.0003419345,0.0002973317,0.0002825251],"domain_scores_gemma":[0.9991164,0.00002667606,0.0001276586,0.0005287922,0.00009211083,0.0001083197],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003371224,0.0002532961,0.107652,0.00008581972,0.000009741703,0.00009452691,0.003290153,0.000001394629,0.881545,0.00001251909,0.002802856,0.00391558],"study_design_scores_gemma":[0.0009659424,0.0001504576,0.3634943,0.0004975143,0.00001286267,0.00001767553,0.0005657703,0.000001972672,0.6319531,0.00008587947,0.002134945,0.0001195857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931231,0.001036772,0.0004086449,0.00003805122,0.0005073644,0.0002798747,0.00002296866,0.00004676277,0.004536466],"genre_scores_gemma":[0.9971952,0.0007534155,0.001389139,0.00009922298,0.0001925136,0.00003045909,0.00002472052,0.00002904365,0.0002863197],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2558423,"threshold_uncertainty_score":0.6576136,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1990894443","doi":"10.1016/j.modgep.2005.12.008","title":"Expression of two insm1-like genes in the developing zebrafish nervous system","year":2006,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Directorate for Biological Sciences; Canada Research Chairs","keywords":"Zebrafish; Biology; Gene; Nervous system; Cell biology; Anatomy; Genetics; Neuroscience","retraction":null,"screen_n_in":null,"score":{"opus":0.01601331697145779,"gpt":0.2809945334137625,"spread":0.2649812164423047,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003404074,0.0001890015,0.0001950377,0.0001040825,0.0001021417,0.00003585053,0.0004570954,0.0001363445,0.00001711582],"category_scores_gemma":[0.0000206619,0.0001353441,0.00009499485,0.0001593898,0.00004242073,0.00000904501,0.0003632553,0.000133391,0.00001014658],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003112093,"about_ca_system_score_gemma":0.00007860745,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003155543,"about_ca_topic_score_gemma":0.0002404146,"domain_scores_codex":[0.9981525,0.0003055675,0.0003813113,0.0004102575,0.0003896543,0.0003607014],"domain_scores_gemma":[0.9991001,0.00004395806,0.0001051415,0.000612002,0.00009045004,0.00004834931],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003859431,0.00004905224,0.02907266,0.0001068028,0.000004013461,0.00002479088,0.00007159042,0.00009524751,0.9677596,0.00001233656,0.001114754,0.001650547],"study_design_scores_gemma":[0.0005719774,0.0000672684,0.02751397,0.0001975994,0.000004068375,0.0000407003,0.000216569,0.000044196,0.9681084,0.0000178539,0.003042635,0.0001747589],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939077,0.0009332459,0.004026196,0.00005096692,0.000166292,0.0003555409,0.0000354256,0.00001701961,0.0005075648],"genre_scores_gemma":[0.9981543,0.00004295419,0.0009662887,0.00008926356,0.0003142127,0.00008851948,0.0001102871,0.00002943257,0.0002047626],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004246531,"threshold_uncertainty_score":0.5519171,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1971596618","doi":"10.1016/s1567-133x(01)00018-7","title":"Microarray analysis of brain RNA in mice with methylenetetrahydrofolate reductase deficiency and hyperhomocysteinemia","year":2002,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Folate and B Vitamins Research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre; McGill Genome Centre; McGill University","funders":"","keywords":"Methylenetetrahydrofolate reductase; Hyperhomocysteinemia; Biology; Endocrinology; Internal medicine; Microarray analysis techniques; Gene expression; Homocysteine; Gene; Biochemistry; Medicine; Allele","retraction":null,"screen_n_in":null,"score":{"opus":0.02120698004973303,"gpt":0.2767310767707379,"spread":0.2555240967210049,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000250784,0.0001718363,0.000460233,0.0007611769,0.00004374267,0.0000142448,0.000121248,0.000103402,0.0004486344],"category_scores_gemma":[0.00004985306,0.0001224944,0.0000848214,0.0009660196,0.00007177606,0.00007946996,0.00006896152,0.0002160268,0.000007248742],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003355711,"about_ca_system_score_gemma":0.00002164623,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000365597,"about_ca_topic_score_gemma":0.00009011257,"domain_scores_codex":[0.9984255,0.0001003855,0.0003481013,0.0004288499,0.0003710873,0.0003260105],"domain_scores_gemma":[0.9991914,0.00008878052,0.00009559028,0.0003920189,0.00006820972,0.0001639686],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001017406,0.0001769375,0.09195958,0.00008841453,0.0001173277,0.0001191778,0.0008130624,0.00004700063,0.9031125,5.108046e-7,0.0003050302,0.003158703],"study_design_scores_gemma":[0.001738924,0.00039391,0.07818901,0.0002264251,0.0002997182,0.00004270806,0.0002483772,0.002210548,0.9163477,0.00000155538,0.0001254626,0.0001756528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996731,0.001815816,0.0002413451,0.0004248542,0.00002085646,0.0002163005,0.00004676458,0.00001562939,0.0004874517],"genre_scores_gemma":[0.9974239,0.0003267712,0.001231831,0.000130116,0.00002433119,0.00001293323,0.00004068889,0.00001995537,0.0007894278],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01377057,"threshold_uncertainty_score":0.4995176,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2054216757","doi":"10.1016/j.gep.2013.10.003","title":"Gene expression is dynamically regulated in retinal progenitor cells prior to and during overt cellular differentiation","year":2013,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Alberta Children's Hospital; Hotchkiss Brain Institute; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"PAX6; Biology; Homeobox; HES1; Progenitor cell; Genetics; Transcription factor; Gene; Embryonic stem cell; Cellular differentiation; Cell biology; Gene expression; Basic helix-loop-helix; Molecular biology; Notch signaling pathway; Stem cell; DNA-binding protein","retraction":null,"screen_n_in":null,"score":{"opus":0.003983612051951985,"gpt":0.2025143360000152,"spread":0.1985307239480632,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007008142,0.0002330297,0.0001687447,0.00009289337,0.00009791218,0.00006244277,0.0001723994,0.000193258,0.0001704717],"category_scores_gemma":[0.00001785266,0.0002057156,0.00005335452,0.00007419415,0.00001906152,0.00001576702,0.0003007832,0.00009109162,0.00002622661],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002251314,"about_ca_system_score_gemma":0.00002222261,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003389671,"about_ca_topic_score_gemma":0.000006350593,"domain_scores_codex":[0.9984639,0.00007202139,0.0003246145,0.0005807382,0.0002264376,0.0003322809],"domain_scores_gemma":[0.9993472,0.00000562032,0.0001013647,0.0003119181,0.00006395999,0.0001699511],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001183882,0.000056316,0.07110538,0.00003839945,0.000006852224,0.000003752282,0.0001991615,0.00001093179,0.9272178,1.079551e-7,0.0006874992,0.000555444],"study_design_scores_gemma":[0.000619464,0.00006237133,0.192617,0.00009771132,0.00000414382,0.000002763355,0.00005080325,0.00007306452,0.8061042,0.00001232315,0.0001236325,0.0002325077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965494,0.0001260626,0.002411339,0.0001381475,0.0001314496,0.0005753085,0.00001523762,0.00001836926,0.00003464402],"genre_scores_gemma":[0.9952804,0.000101884,0.003286938,0.0001423257,0.00009646596,0.0001154031,0.0001905105,0.00003313522,0.000752936],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1215116,"threshold_uncertainty_score":0.8388836,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2168749324","doi":"10.1016/j.modgep.2005.03.008","title":"Dynamic expression of murine HOXA5 protein in the central nervous system","year":2005,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval; Hôtel-Dieu de Québec","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Iowa State University","keywords":"Biology; Hox gene; Mesoderm; Lateral plate mesoderm; Limb bud; Forelimb; Hindbrain; Homeobox; Genetics; Cell biology; Transcription factor; Rhombomere; Central nervous system; Gene; Anatomy; Embryonic stem cell; Neuroscience","retraction":null,"screen_n_in":null,"score":{"opus":0.004788018336238451,"gpt":0.2221528265367071,"spread":0.2173648082004687,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000183141,0.00014143,0.0001272598,0.00004408793,0.00006004185,0.000007688638,0.0002505201,0.0001573714,0.00002397233],"category_scores_gemma":[0.00001018922,0.00009577283,0.00005967615,0.00006169085,0.00003229462,0.000006401291,0.0001189393,0.00007587312,0.000006878642],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002491098,"about_ca_system_score_gemma":0.00002669621,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001274773,"about_ca_topic_score_gemma":0.00004487276,"domain_scores_codex":[0.9989009,0.0001543906,0.0002839263,0.0002815989,0.0001418654,0.0002373421],"domain_scores_gemma":[0.9994769,0.000006629461,0.000122532,0.0003318674,0.0000229911,0.00003908095],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007645094,0.00006591371,0.01281583,0.00003806087,0.000004623451,0.000003041161,0.0001655038,0.0001750396,0.9829102,0.000003606349,0.0002453394,0.003496352],"study_design_scores_gemma":[0.000387852,0.00006281574,0.1109713,0.0001193739,0.000002793137,0.00001788502,0.0001948058,0.00007158519,0.8867793,0.000004422292,0.001277259,0.0001105971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971229,0.0002715045,0.001844169,0.0001339945,0.00009683389,0.0003431884,0.00002593796,0.00001054729,0.0001509666],"genre_scores_gemma":[0.9974818,0.00002585037,0.001686955,0.00007378182,0.0001127588,0.00006708934,0.0002809861,0.00001196244,0.0002588688],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09815548,"threshold_uncertainty_score":0.3905503,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2071386880","doi":"10.1016/j.modgep.2006.11.006","title":"The temporal and spatial expression of Claudins in epidermal development and the accelerated program of epidermal differentiation in K14-CaSR transgenic mice","year":2006,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; Genetically modified mouse; Cell biology; Transgene; Claudin; Epidermal growth factor; Epithelium; Gene; Genetics; Receptor","retraction":null,"screen_n_in":null,"score":{"opus":0.01382360696666984,"gpt":0.2507416040376386,"spread":0.2369179970709687,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003575267,0.0001565096,0.0002047778,0.00005008708,0.00008689098,0.00001964987,0.0001481013,0.0001230144,0.000009675289],"category_scores_gemma":[0.00001472689,0.00009579497,0.00003900451,0.00007062672,0.000114467,0.000009124571,0.00009736942,0.00009673931,1.488586e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001061955,"about_ca_system_score_gemma":0.00005352048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002847623,"about_ca_topic_score_gemma":0.0007383391,"domain_scores_codex":[0.9986373,0.0001836266,0.0005385181,0.0002670715,0.0001648459,0.0002086393],"domain_scores_gemma":[0.9995178,0.00004637919,0.0002146649,0.0001477263,0.00004551368,0.00002788837],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003663113,0.00008186071,0.1974724,0.0000377701,0.000009491839,7.515629e-7,0.000385455,0.00005492026,0.7934967,0.000002133789,0.00009884746,0.007993274],"study_design_scores_gemma":[0.00162599,0.00003285732,0.2598275,0.00009427398,0.00000496424,0.000001618676,0.00006658134,0.0001090578,0.7378393,0.00002633147,0.0002768944,0.00009462702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961483,0.001075386,0.00214492,0.0001005314,0.00008150681,0.0004148373,0.000008539027,0.000005078521,0.00002087108],"genre_scores_gemma":[0.9985777,0.000299335,0.0007156511,0.0000210048,0.00006554608,0.0001313311,0.0001236383,0.00001306564,0.00005272641],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06235503,"threshold_uncertainty_score":0.3906406,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4256322884","doi":"10.1016/s0925-4773(02)00350-7","title":"RETRACTED: Rac-1 and IQGAP are potential regulators of E-cadherin–catenin interactions during murine preimplantation development","year":2002,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":true,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"","keywords":"Adherens junction; Cell biology; Blastocyst; Cadherin; Biology; Catenin; Embryo; CDC42; Molecular biology; Cell; Embryogenesis; Signal transduction; Wnt signaling pathway; Genetics","retraction":{"nature":"Retraction","openalex_flagged":true},"screen_n_in":null,"score":{"opus":0.01230498563024204,"gpt":0.2236490917949974,"spread":0.2113441061647554,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007383875,0.0001686303,0.0001474269,0.00007365245,0.0001225091,0.00002135187,0.0001221033,0.0001297556,0.0003422883],"category_scores_gemma":[0.00001364546,0.0001593994,0.00004520673,0.00005519088,0.0000294565,0.00001488832,0.0001437769,0.0001094452,0.000008217128],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000209303,"about_ca_system_score_gemma":0.0000159015,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007029448,"about_ca_topic_score_gemma":0.000007793845,"domain_scores_codex":[0.9989003,0.00003864256,0.000330702,0.0003448488,0.0001904989,0.0001950153],"domain_scores_gemma":[0.9994257,0.000005586662,0.0002274082,0.0001858994,0.00007738823,0.0000780128],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006938994,0.00004982297,0.02962827,0.00005394423,0.00004087563,0.000006206046,0.0002905243,0.00006120649,0.9674282,2.282127e-7,0.001140377,0.001230974],"study_design_scores_gemma":[0.0004856376,0.00002608601,0.1476848,0.0001155585,0.00001082536,0.00004263921,0.00009024751,0.00002170161,0.8500605,0.000002609943,0.001285055,0.0001743684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976798,0.0002998227,0.001428933,0.0000432681,0.0002935567,0.0001262796,0.00002113535,0.00001983162,0.00008733796],"genre_scores_gemma":[0.9952119,0.0002620884,0.001851138,0.00002894266,0.0001932453,0.00003776877,0.0001392975,0.00002489232,0.002250754],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1180565,"threshold_uncertainty_score":0.6500118,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1980318828","doi":"10.1016/j.modgep.2005.10.009","title":"Characterization of big bang, a novel gene encoding for PDZ domain-containing proteins that are dynamically expressed throughout Drosophila development","year":2006,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Canada Research Chairs; University of Toronto; Hospital for Sick Children","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"PDZ domain; Biology; Drosophila melanogaster; Imaginal disc; Cell biology; Alternative splicing; Gene; Genetics; Scaffold protein; Enhancer; In situ hybridization; Gene expression; Gene isoform; Signal transduction","retraction":null,"screen_n_in":null,"score":{"opus":0.05191136911025735,"gpt":0.2862097592609348,"spread":0.2342983901506775,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002325428,0.0002940502,0.000393025,0.0001703331,0.0004133165,0.00003933068,0.0005024209,0.0002131911,0.00003787868],"category_scores_gemma":[0.00009678031,0.0002525886,0.0001153831,0.0001497665,0.0001360209,0.0002098734,0.0002900951,0.0002346031,0.000007846614],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005230923,"about_ca_system_score_gemma":0.0000979187,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001018257,"about_ca_topic_score_gemma":0.000006421041,"domain_scores_codex":[0.9976026,0.0001934429,0.0005196666,0.0008068111,0.0003008149,0.0005767102],"domain_scores_gemma":[0.9987262,0.0002062392,0.0004706041,0.0004246531,0.00009152399,0.00008076188],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002872232,0.0002454036,0.007180588,0.00007729187,0.000006787057,0.000009665983,0.0003255472,0.00002515842,0.9915992,0.00007107004,0.00001212522,0.0001599094],"study_design_scores_gemma":[0.001184727,0.0001494282,0.03984414,0.0001551478,0.000004831947,0.00001187271,0.00002962602,0.00007656144,0.9577923,0.000230888,0.0002651103,0.000255378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9395154,0.000008065435,0.0584848,0.0001535625,0.0003060328,0.001019772,0.000345437,0.00007849,0.00008846207],"genre_scores_gemma":[0.9960595,0.00001409904,0.002301329,0.0003553435,0.0002487375,0.0005407121,0.0002604348,0.0000482748,0.0001715877],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0565441,"threshold_uncertainty_score":0.9999926,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2095137447","doi":"10.1016/j.gep.2009.02.002","title":"FIAT is co-expressed with its dimerization target ATF4 in early osteoblasts, but not in osteocytes","year":2009,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Shriners Hospitals for Children - Canada; McGill University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institutes of Health","keywords":"ATF4; Osteocalcin; RUNX2; Osteoblast; Biology; Gene expression; Cell biology; Messenger RNA; Transactivation; Molecular biology; Gene; Unfolded protein response; Biochemistry; In vitro; Endoplasmic reticulum; Alkaline phosphatase","retraction":null,"screen_n_in":null,"score":{"opus":0.01086162995897116,"gpt":0.2608914936629715,"spread":0.2500298637040004,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001373765,0.0002054917,0.0001943929,0.0001308967,0.00005762184,0.00004828587,0.0002458008,0.0001648934,0.00006915887],"category_scores_gemma":[0.00004017845,0.0001730859,0.00004411316,0.0001292525,0.00002010214,0.00002149464,0.00007765699,0.000166867,0.00001722068],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002241793,"about_ca_system_score_gemma":0.00005400725,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008853568,"about_ca_topic_score_gemma":0.00003779418,"domain_scores_codex":[0.9983935,0.0001039461,0.0002660479,0.0005022547,0.0002935167,0.0004407566],"domain_scores_gemma":[0.9993523,0.00001432952,0.00008460277,0.0003675914,0.00005389844,0.0001272213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003672035,0.00007017649,0.06763146,0.00001440925,0.000004836419,0.0000268953,0.0001824595,0.0002104057,0.9303263,6.784776e-7,0.000387155,0.0007780018],"study_design_scores_gemma":[0.001230044,0.0004439699,0.1033376,0.000123205,0.000001597531,0.000003435343,0.00006194205,0.0001816861,0.8939946,0.000004877386,0.0004132416,0.0002038809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972469,0.0001759321,0.001743834,0.0002479786,0.00002885974,0.0003062519,0.00008553516,0.00001314278,0.0001515539],"genre_scores_gemma":[0.9973902,0.0001560872,0.0004885329,0.0005595564,0.0001018019,0.00003796462,0.0002483735,0.00002454343,0.0009930163],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03633175,"threshold_uncertainty_score":0.7058238,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2621293150","doi":"10.1016/j.gep.2017.05.002","title":"Gene expression profiles in mouse cumulus cells derived from in vitro matured oocytes with and without blastocyst formation","year":2017,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Blastocyst; Biology; In vitro maturation; Transcriptome; Oocyte; Cell biology; Gene; Andrology; Embryonic stem cell; Wnt signaling pathway; Germ cell; Embryo; Zygote; Embryogenesis; Gene expression; Molecular biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02078524124297351,"gpt":0.2708567675989818,"spread":0.2500715263560083,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001972277,0.000237122,0.0004036393,0.0001080448,0.0001672698,0.00004166941,0.0001650587,0.0002214043,0.00003629881],"category_scores_gemma":[0.00007894572,0.000161822,0.00003356311,0.00003053675,0.0001210163,0.0003674311,0.0001772698,0.0002891608,0.000007092607],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005465089,"about_ca_system_score_gemma":0.00003155437,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002286078,"about_ca_topic_score_gemma":0.00006451977,"domain_scores_codex":[0.9984691,0.00013858,0.0003248802,0.0006056417,0.0001860071,0.000275832],"domain_scores_gemma":[0.9986883,0.0000283642,0.0002587672,0.0008549294,0.00005809848,0.0001115529],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.006201683,0.000106641,0.2812575,0.00004378096,0.000006904062,0.00001852842,0.0008517524,0.000004780849,0.7108289,2.785134e-8,0.00002557171,0.0006539146],"study_design_scores_gemma":[0.001808006,0.0000604769,0.4385205,0.0002301259,0.000007608942,0.000007398245,0.0001148154,0.0001040129,0.5590201,0.00001085364,0.00001195698,0.0001041134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968714,0.0002507509,0.001616297,0.0001702582,0.0001186488,0.0007896049,0.0001091251,0.00003706192,0.00003686139],"genre_scores_gemma":[0.9930027,0.000077544,0.006252648,0.00007519727,0.0001388839,0.0001245513,0.000184052,0.00002296359,0.0001214692],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.157263,"threshold_uncertainty_score":0.6598909,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2062603967","doi":"10.1016/j.gep.2012.01.007","title":"Neuronal expression of class 6 semaphorins in zebrafish","year":2012,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates; Heart and Stroke Foundation of Canada","keywords":"Semaphorin; Axon guidance; Zebrafish; Biology; Plexin; Vertebrate; Neural development; Xenopus; Nervous system; Cell biology; Neuroscience; Axon; Genetics; Receptor; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.04508401175093493,"gpt":0.2808348888542036,"spread":0.2357508771032687,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002158581,0.000215302,0.0002584488,0.000162947,0.00009030556,0.00001660348,0.0003892398,0.0001052331,0.0004050662],"category_scores_gemma":[0.000148121,0.0001856339,0.0001006677,0.0002222816,0.00005049311,0.0004562791,0.0002832543,0.0002825504,0.00005256037],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002649416,"about_ca_system_score_gemma":0.0000239808,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001423535,"about_ca_topic_score_gemma":0.000001937564,"domain_scores_codex":[0.9977022,0.000263952,0.0004728542,0.0004457167,0.0005508686,0.000564451],"domain_scores_gemma":[0.9989555,0.0002256002,0.0002179769,0.0003897483,0.00002049581,0.0001907091],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005325536,0.0001971587,0.06765685,0.000024727,4.478139e-7,0.00001212623,0.0003242109,0.00007495539,0.930767,0.00003513245,0.0005467291,0.0003074119],"study_design_scores_gemma":[0.0004382262,0.00005057089,0.03984691,0.000171024,0.000002554194,0.00001156522,0.00005175784,0.00004062032,0.9573194,0.00003756984,0.001849004,0.00018081],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971045,0.00007401083,0.001053353,0.00007994653,0.0005936288,0.0001855833,0.00004138235,0.00005179484,0.0008158069],"genre_scores_gemma":[0.9984868,0.00005425148,0.0001925377,0.0007909565,0.0002774347,0.0000322048,0.000004862006,0.00003494245,0.0001260372],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02780994,"threshold_uncertainty_score":0.756993,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2008746919","doi":"10.1016/j.modgep.2006.05.007","title":"Irxl1, a divergent Iroquois homeobox family transcription factor gene","year":2006,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Homeobox; Biology; Genetics; Gene; Transcription factor; Gene family; Homology (biology); Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.009996457344256492,"gpt":0.2211073152726743,"spread":0.2111108579284178,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007425503,0.0002286369,0.0001526423,0.00005995448,0.0001543405,0.00002080468,0.0001763675,0.0002574419,0.0001394983],"category_scores_gemma":[0.000004782417,0.0002035214,0.000124459,0.00005954678,0.00004153018,0.0000088764,0.00009854439,0.00007128527,0.00005284156],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002550349,"about_ca_system_score_gemma":0.00003097337,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004660799,"about_ca_topic_score_gemma":0.00002557594,"domain_scores_codex":[0.9986728,0.00007520705,0.0002820534,0.0004935263,0.0001752534,0.0003011886],"domain_scores_gemma":[0.9994664,0.000004213292,0.0000955676,0.0003047221,0.00004695517,0.00008213655],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006840498,0.00007523019,0.04174096,0.000009368459,0.00001912726,0.000003804972,0.00003840206,0.00009734539,0.9518564,0.000002713538,0.003888405,0.002199822],"study_design_scores_gemma":[0.0004211156,0.00006920211,0.2676248,0.00001145732,0.000007091602,0.000008147917,0.00001818311,0.000008350488,0.7219647,0.00003619335,0.009623815,0.0002069071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9799302,0.0007886617,0.01797852,0.00007388584,0.0005469224,0.0002039478,0.000186536,0.00003896606,0.0002524088],"genre_scores_gemma":[0.9933294,0.0002245828,0.001411975,0.000253064,0.0004130095,0.00004489036,0.001989655,0.00002475734,0.002308644],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2298917,"threshold_uncertainty_score":0.8299363,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2037862772","doi":"10.1016/j.gep.2011.08.007","title":"Expression analysis of the peroxiredoxin gene family during early development in Xenopus laevis","year":2011,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Peroxiredoxin; Xenopus; Biology; Reactive oxygen species; Gene; Cell biology; Zebrafish; African clawed frog; Cloning (programming); Biochemistry; Genetics; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.01831233003324331,"gpt":0.2357499723590304,"spread":0.2174376423257871,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001525817,0.0002053326,0.0002653456,0.0001487092,0.0001150794,0.000007122424,0.0004563128,0.0002158297,0.00007938891],"category_scores_gemma":[0.00002400001,0.0001411789,0.000162715,0.0002412606,0.00007328497,0.000007831051,0.0004334682,0.0001223373,0.000003469612],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000166425,"about_ca_system_score_gemma":0.00003928145,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007642608,"about_ca_topic_score_gemma":0.00006306102,"domain_scores_codex":[0.9984722,0.0002012933,0.000401353,0.0004713782,0.0001718116,0.0002820258],"domain_scores_gemma":[0.9990559,0.000008661442,0.0002095153,0.0006008299,0.00005935798,0.00006579904],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007648357,0.00005913931,0.3631324,0.000008106876,0.0000779897,0.000003104853,0.0005389389,0.0000293923,0.6358989,4.614074e-7,0.00002117378,0.0001538263],"study_design_scores_gemma":[0.0002173632,0.0000230948,0.466044,0.00003646456,0.00002253278,6.317159e-7,0.00006243522,0.000001986448,0.5334198,0.000001977565,0.00007281773,0.00009691115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982119,0.000333647,0.0008893528,0.000006571529,0.0001391754,0.0001663962,0.00005477021,0.000007987487,0.0001902509],"genre_scores_gemma":[0.9981329,0.0001044997,0.001218634,0.00005222142,0.00005310608,0.00004460098,0.0000971576,0.00001667206,0.0002802036],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1029115,"threshold_uncertainty_score":0.5757107,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3007322987","doi":"10.1016/j.gep.2020.119100","title":"Analysis of zebrafish cryptochrome 2 and 4 expression in UV cone photoreceptors","year":2020,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Women and Children’s Health Research Institute; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Cryptochrome; Magnetoreception; Zebrafish; Biology; Retina; Cell biology; Circadian clock; Retinal; Genetics; Gene; Biochemistry; Neuroscience","retraction":null,"screen_n_in":null,"score":{"opus":0.02647690213533194,"gpt":0.2553489473796456,"spread":0.2288720452443136,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008892708,0.0001766414,0.0004160222,0.0002859211,0.00005590552,0.00002660329,0.0001980128,0.0001082196,0.0009493754],"category_scores_gemma":[0.0001562284,0.0001578895,0.0001080881,0.0006851415,0.00006900174,0.0001709036,0.0001833704,0.0001653123,0.00001476463],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001714355,"about_ca_system_score_gemma":0.00002025952,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001917494,"about_ca_topic_score_gemma":0.000003900446,"domain_scores_codex":[0.9982994,0.0001447923,0.0003839692,0.0005959503,0.0003108103,0.0002651231],"domain_scores_gemma":[0.9991489,0.0001313741,0.0001737656,0.0002779288,0.00001801898,0.0002500073],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003928073,0.00004222487,0.1004385,0.0000256653,0.000008382253,0.00002543686,0.001666393,0.00008826663,0.8971213,0.00001205155,0.000246131,0.0002863383],"study_design_scores_gemma":[0.0005707464,0.000045576,0.09837503,0.00007294698,0.00003366685,0.000002374911,0.0001181055,0.0007208725,0.8994552,0.000005914671,0.0004428007,0.0001566973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978175,0.0001390067,0.001178857,0.0001742722,0.0001168223,0.0002042207,0.000144499,0.00004171428,0.0001831234],"genre_scores_gemma":[0.9987336,0.000111623,0.0001985984,0.0007932139,0.00006296063,0.00002373011,0.00001639931,0.00001988901,0.00004001386],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002333941,"threshold_uncertainty_score":0.9999639,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4308034318","doi":"10.1016/j.gep.2022.119288","title":"Functional differentiation of bmp2a and bmp2b genes in zebrafish","year":2022,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Agriculture Research System of China; Huazhong Agricultural University; National Natural Science Foundation of China","keywords":"Zebrafish; Biology; In situ hybridization; Gene; Phenotype; Somite; Genetics; Cell biology; Embryonic stem cell; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.01007821716237135,"gpt":0.2182440814248178,"spread":0.2081658642624464,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006199534,0.00007430432,0.00008933371,0.00004910427,0.00005963221,0.0000061698,0.00006697669,0.00003223699,0.0002671176],"category_scores_gemma":[0.00001043734,0.00007152415,0.0000375009,0.00003851984,0.00001536719,0.000003545518,0.0002361108,0.00004017173,5.87034e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003727587,"about_ca_system_score_gemma":0.00001974244,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002486895,"about_ca_topic_score_gemma":0.000009096656,"domain_scores_codex":[0.9993405,0.00007609386,0.0001434381,0.0002088749,0.0001354045,0.00009572372],"domain_scores_gemma":[0.9997191,0.000005692038,0.00006346071,0.0001556091,0.00001691306,0.00003918342],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000715892,0.00008136746,0.1645352,0.00001180168,0.000005030676,9.781185e-7,0.00002979286,0.0001152689,0.8328588,0.000005452765,0.001024022,0.001260734],"study_design_scores_gemma":[0.0005062296,0.00003978994,0.4357616,0.000005537853,0.000006078838,0.000003191815,0.0000962257,0.00002060937,0.562173,0.00004301635,0.001271235,0.00007352264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960963,0.002047528,0.001388624,0.00003767293,0.0001748356,0.000075964,0.000141809,0.000004304698,0.00003296179],"genre_scores_gemma":[0.9990333,0.0001514485,0.00009318764,0.0001175677,0.00009662148,0.00003302496,0.00033173,0.000009009396,0.0001340965],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2712264,"threshold_uncertainty_score":0.2924751,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1990310989","doi":"10.1016/j.modgep.2005.06.004","title":"Zebrafish collapsin response mediator protein (CRMP)-2 is expressed in developing neurons","year":2005,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":12,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Heart and Stroke Foundation of Canada","keywords":"Biology; Hindbrain; Semaphorin; Neurogenesis; Zebrafish; Neuroscience; Otic vesicle; Cerebrum; Forebrain; Diencephalon; Nervous system; Cell biology; Anatomy; Neural development; Central nervous system; In situ hybridization; Receptor; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.04113116437340578,"gpt":0.2843431184001816,"spread":0.2432119540267758,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000422211,0.0003418644,0.0003151428,0.0002676358,0.0002463228,0.00009699476,0.0006510178,0.0001493464,0.0003898052],"category_scores_gemma":[0.0006109446,0.0003246707,0.00009501623,0.0004276623,0.00006010721,0.0004575608,0.000319884,0.000356388,0.0002334952],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001194583,"about_ca_system_score_gemma":0.0001821343,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001322023,"about_ca_topic_score_gemma":0.00001388962,"domain_scores_codex":[0.9963986,0.0005791897,0.0006285341,0.001000777,0.0006900366,0.0007028507],"domain_scores_gemma":[0.9985426,0.0004183391,0.0002223223,0.000565691,0.00003894892,0.000212073],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004580405,0.00008485439,0.001779901,0.00001739387,0.000001102318,0.0001199012,0.0005889855,0.00006763899,0.9926372,0.00001563043,0.003629511,0.0005998314],"study_design_scores_gemma":[0.0009498624,0.000063532,0.003992691,0.0002777719,0.000002457006,0.00001366295,0.00005383211,0.0001910191,0.9671242,0.00004506713,0.02691179,0.0003741327],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9918355,0.00004631461,0.001690445,0.005141201,0.0002513433,0.0006359908,0.0001001075,0.0001557403,0.000143333],"genre_scores_gemma":[0.9880084,0.00005444253,0.001790893,0.009060599,0.0002737392,0.0002228885,0.000003989942,0.0000693053,0.0005157305],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02551303,"threshold_uncertainty_score":0.9999205,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2034774169","doi":"10.1016/j.modgep.2004.07.009","title":"High expression during neurogenesis but not mammogenesis of a murine homologue of the Deleted in Breast Cancer2/Rhobtb2 tumor suppressor","year":2004,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children; University of Toronto; University Health Network","funders":"National Cancer Institute; Terry Fox Foundation","keywords":"Biology; Suppressor; Mammary gland; Tumor suppressor gene; Gene; Neurogenesis; Embryogenesis; Cancer research; Breast cancer; Gene expression; Messenger RNA; Cancer; Carcinogenesis; Cell biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.007425785898522119,"gpt":0.2199195056224485,"spread":0.2124937197239264,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001478058,0.000335245,0.0004153385,0.0001179053,0.00009261131,0.0000104598,0.0007283213,0.0002050367,0.0001030115],"category_scores_gemma":[0.00005244377,0.0002646657,0.0002194646,0.0002010919,0.0001221759,0.00001201919,0.0005969662,0.0001575694,0.000001786611],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006917721,"about_ca_system_score_gemma":0.0001615611,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001133797,"about_ca_topic_score_gemma":0.0001275709,"domain_scores_codex":[0.9976403,0.0001879754,0.0006639011,0.0006636559,0.000403389,0.0004408465],"domain_scores_gemma":[0.9982206,0.00002415,0.0004640861,0.001044175,0.0001392558,0.0001077369],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00046601,0.0001624597,0.0321637,0.0001420932,0.00002718146,0.00002179924,0.00006910491,0.007142095,0.9596018,8.924935e-7,0.00008444437,0.0001184309],"study_design_scores_gemma":[0.001730852,0.0001027009,0.1195367,0.0003989913,0.00002188917,0.00005924601,0.0000332931,0.000006988342,0.8778282,0.000010105,0.00003235696,0.0002387409],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997364,0.0004129446,0.0004440894,0.0001375554,0.0003982242,0.0003435081,0.0008737749,0.00001750332,0.000008413625],"genre_scores_gemma":[0.9985824,0.0001342469,0.0006037173,0.0001307786,0.0002201786,0.0001302962,0.0000663939,0.00006756827,0.00006447043],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08737298,"threshold_uncertainty_score":0.9999806,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2093224602","doi":"10.1016/j.gep.2012.01.005","title":"Claudin-5 expression in the vasculature of the developing chick embryo","year":2012,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":11,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Institute of Genetics; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fondation des Etoiles","keywords":"Embryo; Claudin; Biology; Cell biology; Anatomy; Embryogenesis; Andrology; Tight junction; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.0361699066626414,"gpt":0.2695800785732754,"spread":0.233410171910634,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000258774,0.0001690345,0.0001727505,0.00005457699,0.0003089574,0.00002451801,0.000511566,0.0001036037,0.00008059779],"category_scores_gemma":[0.0001757812,0.00007875998,0.0001069829,0.000289939,0.00007245514,0.0002041957,0.0003325309,0.000318782,0.000009141125],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001776552,"about_ca_system_score_gemma":0.00001988185,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007094498,"about_ca_topic_score_gemma":0.000004911108,"domain_scores_codex":[0.998329,0.0003464162,0.0002690569,0.0002642121,0.0004674611,0.0003238219],"domain_scores_gemma":[0.9990463,0.0001605257,0.000164078,0.0005622232,0.00002512329,0.00004172959],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001374596,0.0000260029,0.0673509,0.00002042299,0.000002437167,9.874506e-7,0.004005011,0.00001253617,0.9244121,0.0001304954,0.003484453,0.0005409207],"study_design_scores_gemma":[0.0001868551,0.000005865073,0.2849644,0.00009516554,0.000004966741,0.00001204339,0.0003607045,0.000002097997,0.7078948,0.0001227355,0.006260267,0.00009012277],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934676,0.0003977931,0.002413305,0.0006407931,0.001616356,0.0002722929,0.00001918647,0.00002551525,0.001147115],"genre_scores_gemma":[0.9972355,0.0000728228,0.0002628845,0.001949019,0.0002822548,0.00003669989,0.000001295011,0.00001337899,0.0001461136],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2176135,"threshold_uncertainty_score":0.3211739,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1972710202","doi":"10.1016/j.gep.2013.06.006","title":"Neuronal expression of fibroblast growth factor receptors in zebrafish","year":2013,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates; Canada Research Chairs; Foundation Fighting Blindness","keywords":"Zebrafish; Biology; Fibroblast growth factor; Fibroblast growth factor receptor; Fibroblast growth factor receptor 1; Cell biology; Morphogenesis; Receptor; Developmental biology; Fibroblast growth factor receptor 4; FGF10; Fibroblast growth factor receptor 2; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01246999932933416,"gpt":0.2477963499242204,"spread":0.2353263505948862,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009582803,0.0002701566,0.0002504314,0.000169532,0.00005177323,0.00003482463,0.0004906324,0.0002500892,0.001347955],"category_scores_gemma":[0.0001321336,0.0002353066,0.0001234966,0.0001393251,0.00007415916,0.00002862267,0.0005394517,0.0002332427,0.00006771414],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002199851,"about_ca_system_score_gemma":0.00005663562,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001338199,"about_ca_topic_score_gemma":0.00001445532,"domain_scores_codex":[0.997816,0.0002067941,0.0004496421,0.000601913,0.0004309692,0.000494727],"domain_scores_gemma":[0.9989231,0.00003236067,0.0001560734,0.0005460418,0.0001424929,0.0001999729],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005473387,0.00009775548,0.08480831,0.00006751785,0.000005417765,0.000001741429,0.00008256154,0.00001819778,0.9074295,9.714947e-7,0.007168826,0.0002644818],"study_design_scores_gemma":[0.0005626022,0.0002279816,0.1288989,0.0001847193,0.000001039477,0.000002793855,0.00004945845,0.00001286026,0.8693988,0.00002130927,0.0004312061,0.0002082948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980295,0.00004525797,0.0009680765,0.00008808912,0.0001698872,0.0003999054,0.00008981289,0.00001897743,0.0001904643],"genre_scores_gemma":[0.9981277,0.00003740972,0.0009279157,0.00007885876,0.0001646573,0.00008768166,0.0001726824,0.00005587485,0.0003471998],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04409058,"threshold_uncertainty_score":0.9995649,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2523606552","doi":"10.1016/j.gep.2016.09.003","title":"Gene expression analysis during the induction and patterning of the conjunctival papillae in the chick embryonic eye","year":2016,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Saint Vincent University; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Killam Trusts; Dalhousie University; Mount Saint Vincent University","keywords":"Biology; Neural crest; Anatomy; Embryogenesis; Embryo; Major duodenal papilla; Epithelium; Cell biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01141641890651261,"gpt":0.2396875419546574,"spread":0.2282711230481448,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004241066,0.0002004943,0.0002078119,0.00006948914,0.000279126,0.00002347021,0.0004056489,0.0001234775,0.00002309163],"category_scores_gemma":[0.00009500302,0.00008168261,0.0001482382,0.0001884052,0.0001258667,0.00000952231,0.0004574442,0.0001431827,0.000001522931],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001608199,"about_ca_system_score_gemma":0.00002221374,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003118657,"about_ca_topic_score_gemma":0.00004260189,"domain_scores_codex":[0.9982967,0.000440149,0.0002961121,0.0004268917,0.0002831268,0.0002570456],"domain_scores_gemma":[0.998888,0.00005928542,0.0002315168,0.0007322513,0.00005441761,0.00003456214],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002966272,0.00001840955,0.2721373,0.00001168198,0.00005837444,0.000001156577,0.0004993824,0.00006951376,0.7266611,2.789777e-7,0.0000757339,0.000437406],"study_design_scores_gemma":[0.0003409052,0.00002763,0.3358307,0.00008171757,0.00003728153,0.000003535756,0.0003484378,0.000003848469,0.6630574,0.000005907938,0.0001726002,0.00008999922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967102,0.0005889656,0.00161119,0.0006123802,0.00017272,0.0002319151,0.00004293476,0.000007659909,0.00002198385],"genre_scores_gemma":[0.998983,0.0002750887,0.00004712343,0.0001370053,0.0002665114,0.00005651915,0.00001211139,0.00001845979,0.0002042289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06369341,"threshold_uncertainty_score":0.333092,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2052851265","doi":"10.1016/j.gep.2015.03.002","title":"Anillin localization suggests distinct mechanisms of division plane specification in mouse oogenic meiosis I and II","year":2015,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of General Medical Sciences; National Institutes of Health; Cytokinetics","keywords":"Meiosis; Cell biology; Polar body; Biology; Cytokinesis; Cytoskeleton; Anaphase; Cohesin; Cell division; Oocyte; Genetics; Chromosome; Gene; Embryo; Cell","retraction":null,"screen_n_in":null,"score":{"opus":0.01429155663501728,"gpt":0.2389254037775578,"spread":0.2246338471425405,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001630094,0.0001265235,0.0001355303,0.00005966227,0.00004097894,0.000009930716,0.0001160296,0.0001428674,0.0000139267],"category_scores_gemma":[0.00003855618,0.0001160458,0.00002983527,0.00005346018,0.00002019369,0.000006857129,0.0001855258,0.00004809155,0.000001897581],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001570552,"about_ca_system_score_gemma":0.00002201943,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000479923,"about_ca_topic_score_gemma":0.00008470123,"domain_scores_codex":[0.9990891,0.00006580914,0.0002591197,0.0003092482,0.0001376757,0.0001390743],"domain_scores_gemma":[0.9994392,0.000006433759,0.0001233247,0.0002870201,0.00006008557,0.00008396746],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004891154,0.00008857701,0.02522567,0.00001756275,0.000005198911,0.000001275909,0.0001329628,0.0001793315,0.9732416,0.00001652929,0.0004066137,0.0006357823],"study_design_scores_gemma":[0.000609074,0.000191892,0.006769285,0.00004424592,0.000005835071,0.000004841044,0.00009503454,0.0005943022,0.9910609,0.0001061848,0.0003818533,0.0001365902],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8195426,0.000186532,0.1799275,0.00002118079,0.00007287908,0.000141304,0.00008116488,0.000006698604,0.00002011371],"genre_scores_gemma":[0.9978901,0.000244437,0.0008334098,0.00004629745,0.00004712966,0.00001466714,0.0007834718,0.00001915661,0.0001213636],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1790941,"threshold_uncertainty_score":0.4732211,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2607891517","doi":"10.1016/j.gep.2017.04.004","title":"Characterization of Sgo1 expression in developing and adult mouse","year":2017,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Montreal Heart Institute; McGill University; Centre Hospitalier Universitaire Sainte-Justine","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Fonds de recherche du Québec","keywords":"Biology; Cell biology; Phenotype; Genetically modified mouse; Transgene; Centrosome; Population; Genetics; Cell; Gene; Cell cycle","retraction":null,"screen_n_in":null,"score":{"opus":0.01097515552201484,"gpt":0.2496999306853014,"spread":0.2387247751632866,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006917839,0.0001028835,0.0001058742,0.00004137075,0.00009802284,0.00002890741,0.0001643779,0.00009472782,0.00001148448],"category_scores_gemma":[0.00005108104,0.00009133843,0.00002133555,0.0000134492,0.00002990561,0.00001369443,0.0002242077,0.00003679926,0.000001290525],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004438155,"about_ca_system_score_gemma":0.00002308061,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001538028,"about_ca_topic_score_gemma":0.00001772304,"domain_scores_codex":[0.9993333,0.00002702822,0.0001833599,0.0002358458,0.00009311055,0.0001273536],"domain_scores_gemma":[0.9994645,0.000002621221,0.0001667964,0.00028339,0.0000459407,0.00003679449],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004022857,0.00001253644,0.2193371,0.00002464806,0.000001906936,9.388134e-7,0.00007863225,5.88709e-7,0.7796453,0.000003717395,0.00005324393,0.0008011944],"study_design_scores_gemma":[0.0003445635,0.00001748134,0.2785434,0.00009020945,9.294766e-7,9.185393e-7,0.00002797951,0.000005527446,0.7204719,0.000009773607,0.0003960474,0.00009127609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945878,0.00003298294,0.004951697,0.0001008587,0.00006539634,0.0001079925,0.00001336503,0.000004252118,0.0001356263],"genre_scores_gemma":[0.9969237,0.0006981876,0.001746796,0.00009815874,0.00003890226,0.00001687451,0.0002036527,0.00001214174,0.0002616165],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05920629,"threshold_uncertainty_score":0.3724673,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1989217238","doi":"10.1016/j.modgep.2004.05.002","title":"Identification and characterisation of the posteriorly-expressed Xenopus neurotrophin receptor homolog genes fullback and fullback-like","year":2004,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institutes of Health; Institute of Genetics; Wellcome Trust","keywords":"Xenopus; Biology; Gastrulation; Neurotrophin; Cell biology; Embryo; Gene; Receptor; Anatomy; Molecular biology; Genetics; Embryogenesis","retraction":null,"screen_n_in":null,"score":{"opus":0.01911727806905615,"gpt":0.2422748691316401,"spread":0.223157591062584,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001357369,0.0001850371,0.0001717409,0.00007517618,0.0003040135,0.00009738034,0.0002352978,0.0001072679,0.00003912202],"category_scores_gemma":[0.00007769958,0.0001324754,0.0000508794,0.0001252247,0.0001462542,0.0003462473,0.0001961125,0.0001291743,0.00001124454],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002051756,"about_ca_system_score_gemma":0.00002509262,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002029812,"about_ca_topic_score_gemma":0.000004314536,"domain_scores_codex":[0.998363,0.0002571017,0.0004000434,0.0005190126,0.0002735314,0.0001873015],"domain_scores_gemma":[0.9989284,0.00004419895,0.0004498694,0.0004528966,0.00005090507,0.00007371763],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005673201,0.00005468884,0.00220109,0.00004115234,0.00000199206,0.000002533127,0.0004089326,0.0000446272,0.9949715,0.00003064437,0.00006295578,0.002123129],"study_design_scores_gemma":[0.0004819219,0.00008814989,0.03359083,0.00007501626,0.0000103886,0.00004000305,0.00002793361,0.00003466605,0.9651302,0.0001548903,0.0002238439,0.000142198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964042,0.0001158045,0.0009396877,0.001019174,0.0009151396,0.0004234986,0.0001365598,0.00003823132,0.000007714794],"genre_scores_gemma":[0.9986184,0.0003729649,0.0001545712,0.0003576927,0.000148384,0.00004378745,0.00002188201,0.00002250854,0.0002598365],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03138975,"threshold_uncertainty_score":0.5402188,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2023447813","doi":"10.1016/j.gep.2012.09.001","title":"Immunohistochemical analysis of sphingosine phosphate lyase expression during murine development","year":2012,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Toronto Centre for Phenogenomics; University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Human Genome Research Institute; National Institutes of Health","keywords":"Biology; Neural tube; In situ hybridization; Sphingosine; Embryogenesis; Central nervous system; Epithelium; Cell biology; Endocrinology; Internal medicine; Anatomy; Embryo; Gene expression; Receptor; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.009794460734543453,"gpt":0.2478100915057573,"spread":0.2380156307712138,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002563328,0.0002474906,0.0003628416,0.0001751924,0.000128329,0.00001346384,0.0002723045,0.000157214,0.0002593217],"category_scores_gemma":[0.00004891078,0.0002171741,0.0002080657,0.0002119659,0.00003182906,0.00001628577,0.0003757233,0.000102085,0.000006231478],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002124437,"about_ca_system_score_gemma":0.00002996189,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000189876,"about_ca_topic_score_gemma":0.000001173089,"domain_scores_codex":[0.9983279,0.0000575653,0.0005012963,0.0003862215,0.0002910483,0.0004359384],"domain_scores_gemma":[0.9988962,0.00001156964,0.0002468163,0.0005694748,0.00007385633,0.0002020127],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001321583,0.0001483049,0.06211624,0.00003871569,0.0001672363,0.0000015201,0.0003861906,0.0001352396,0.9364662,8.83291e-7,0.0001273243,0.0002799471],"study_design_scores_gemma":[0.000624663,0.00001332367,0.06400608,0.00006381508,0.0001350748,0.000004010093,0.00005522534,0.0000139543,0.9328837,5.0891e-7,0.001952827,0.0002467986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9884887,0.002674419,0.008330231,0.000006947756,0.0002792108,0.0001168297,0.0000327944,0.00002100284,0.00004984275],"genre_scores_gemma":[0.9940709,0.0001386108,0.004576221,0.00005889855,0.0003914301,0.00003649136,0.0004670846,0.00003294513,0.0002274497],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005582147,"threshold_uncertainty_score":0.8856104,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2739479352","doi":"10.1016/j.gep.2017.07.001","title":"Gene expression profiles of fin regeneration in loach ( Paramisgurnus dabryanu )","year":2017,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"Henan University; National Natural Science Foundation of China; Henan Normal University","keywords":"Biology; KEGG; Blastema; Regeneration (biology); Zebrafish; Gene; Candidate gene; Gene expression profiling; Genetics; Cell biology; Fish fin; Transcriptome; Gene expression","retraction":null,"screen_n_in":null,"score":{"opus":0.01594442957735459,"gpt":0.2703199045376157,"spread":0.2543754749602611,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002335012,0.0001921032,0.0001981507,0.00006663815,0.0002087157,0.0000284659,0.0003543883,0.0002995183,0.00005243384],"category_scores_gemma":[0.0000651856,0.0001671989,0.00006990992,0.0000282783,0.00007568836,0.00001840931,0.0002928572,0.00008767446,0.000008558138],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000159087,"about_ca_system_score_gemma":0.00005487843,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003223549,"about_ca_topic_score_gemma":0.00004322737,"domain_scores_codex":[0.9986523,0.0001132101,0.0003641261,0.0004750567,0.0001572724,0.0002379669],"domain_scores_gemma":[0.9988046,0.000007798824,0.0003275626,0.0007369522,0.0000584288,0.00006468686],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001042757,0.00006586908,0.1638628,0.00001878158,0.000008031628,0.000003641817,0.00006382423,0.0001378775,0.8315327,0.000001782213,0.0007911621,0.003409181],"study_design_scores_gemma":[0.0005712663,0.00007060099,0.1810298,0.00007593095,0.000003629959,0.000007060276,0.0000263254,0.00003864203,0.8174998,0.00004924951,0.0004599348,0.0001677013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946648,0.0003676764,0.004037084,0.0001066331,0.0002918521,0.0002488212,0.00006587049,0.000009061936,0.000208187],"genre_scores_gemma":[0.9940185,0.00022974,0.003760427,0.00005148569,0.0002003808,0.00008724899,0.000895205,0.0000187615,0.0007382759],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.017167,"threshold_uncertainty_score":0.6818174,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1990817232","doi":"10.1016/j.modgep.2006.03.006","title":"Cloning and developmental expression of the DEC1 ortholog gene in zebrafish","year":2006,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Zebrafish; Biology; Cell biology; Notochord; CTGF; Gene; Transcription factor; Embryogenesis; Genetics; Receptor; Growth factor","retraction":null,"screen_n_in":null,"score":{"opus":0.01717238801435261,"gpt":0.2326993411511435,"spread":0.2155269531367909,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001238923,0.0001507497,0.0001661988,0.00009093513,0.0001424003,0.00002412371,0.0002132261,0.00009728532,0.00007441471],"category_scores_gemma":[0.00007584691,0.0001084307,0.00004717713,0.0001587792,0.00007699301,0.0001301765,0.0002983462,0.0001620806,0.000007617209],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002982577,"about_ca_system_score_gemma":0.0000382108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004750926,"about_ca_topic_score_gemma":0.00002379204,"domain_scores_codex":[0.9985939,0.0001331908,0.0003240206,0.0004086913,0.0002581138,0.0002820375],"domain_scores_gemma":[0.9994525,0.00009448169,0.0001373142,0.0002441039,0.00001164299,0.00006000611],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000009471505,0.00003307179,0.223609,0.000008523032,2.459581e-7,0.00002202354,0.000271188,0.00003658904,0.7755498,0.00002914864,0.0002156568,0.000215312],"study_design_scores_gemma":[0.0003846168,0.000007108302,0.2857095,0.0001230636,0.000001440166,0.00006052561,0.00004774777,0.00001283511,0.7131574,0.00004636432,0.0003516603,0.00009770691],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982847,0.000146171,0.0003712092,0.00006665748,0.0002355178,0.0001977555,0.00003154426,0.00002592909,0.0006405026],"genre_scores_gemma":[0.9984351,0.00002880181,0.0008832748,0.0002337198,0.00006763753,0.00002309233,0.000004337632,0.00001908894,0.0003049157],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06239241,"threshold_uncertainty_score":0.4421675,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2022118271","doi":"10.1016/j.gep.2012.04.002","title":"Identification and expression analysis of GPAT family genes during early development of Xenopus laevis","year":2012,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Xenopus; Endoplasmic reticulum; Organogenesis; Cell biology; Lysophosphatidic acid; Embryogenesis; Biochemistry; Gene; Embryo; Receptor","retraction":null,"screen_n_in":null,"score":{"opus":0.01222068012631162,"gpt":0.2407077316085239,"spread":0.2284870514822123,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002194798,0.0001480045,0.0002565714,0.0001629608,0.00008484251,0.00001115826,0.0001553042,0.0001240501,0.00002122276],"category_scores_gemma":[0.00001927401,0.0001205853,0.00009101558,0.0001288046,0.00003016689,0.00001643408,0.0002075838,0.00003293274,0.000001833276],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005371484,"about_ca_system_score_gemma":0.00001933589,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001091966,"about_ca_topic_score_gemma":0.000003074869,"domain_scores_codex":[0.9987926,0.00007146592,0.0004418638,0.0002786494,0.0002123147,0.0002030934],"domain_scores_gemma":[0.99915,0.000009762231,0.0002844185,0.0003862462,0.0000723579,0.00009718279],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003395066,0.00007191297,0.1691011,0.00005513878,0.0001061176,1.0739e-7,0.0004993132,0.000005390072,0.8270801,2.786404e-7,0.00001625654,0.003030373],"study_design_scores_gemma":[0.0001194981,0.000006890268,0.3698739,0.00002795727,0.00008598687,2.998781e-7,0.00008334077,0.000002136427,0.6292339,2.014536e-7,0.0004757927,0.00009013022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945547,0.002075851,0.003066039,0.000003182863,0.0001315679,0.0000964101,0.00005343408,0.000006921679,0.00001187715],"genre_scores_gemma":[0.9968578,0.0002930193,0.002417953,0.00000942778,0.0001577223,0.000018729,0.0001115116,0.00001480203,0.0001189957],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2007727,"threshold_uncertainty_score":0.4917327,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2065260157","doi":"10.1016/j.modgep.2005.04.003","title":"Amino acid cotransporter SLC3A2 is selectively expressed in the early proximal segment of Xenopus pronephric kidney nephrons","year":2005,"lang":"en","type":"article","venue":"Gene Expression Patterns","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Xenopus; Pronephros; Amino acid; Biology; Amino acid transporter; Cotransporter; Transporter; In situ hybridization; Cell biology; Biochemistry; Gene; Messenger RNA; Chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.009058796886755477,"gpt":0.2328324968618031,"spread":0.2237736999750476,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001855344,0.0002674506,0.0002471566,0.0000703119,0.00007209297,0.00002231901,0.0004374421,0.0001864801,0.0001220584],"category_scores_gemma":[0.00001395761,0.00019306,0.0001287445,0.0001140548,0.00005875409,0.00001730001,0.000100347,0.0001745058,0.000009567359],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001609268,"about_ca_system_score_gemma":0.00008900186,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005376677,"about_ca_topic_score_gemma":0.00001716159,"domain_scores_codex":[0.9982436,0.0001186444,0.0004027864,0.0004941221,0.0003237902,0.0004171105],"domain_scores_gemma":[0.9990513,0.000007050552,0.0001707934,0.0005772945,0.00006914794,0.0001244121],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001065808,0.0002280435,0.01662431,0.00002988871,0.00002592156,0.000004129825,0.001748307,0.00001836157,0.9718584,0.000004797588,0.007207963,0.002143285],"study_design_scores_gemma":[0.001027645,0.0001762712,0.05850494,0.00004689859,0.00002355455,0.000008347718,0.0001294468,0.00001443134,0.8993158,0.000007555641,0.04052766,0.0002174093],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932667,0.0006835443,0.004437901,0.000416999,0.00009741796,0.0005599813,0.000256732,0.00001248627,0.000268256],"genre_scores_gemma":[0.9947004,0.0002202336,0.001953447,0.001882674,0.0003684043,0.0001796475,0.0001542558,0.00003372554,0.0005072625],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07254257,"threshold_uncertainty_score":0.7872756,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}