{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":308,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":308,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"84004b94e01d","filters":{"venue":"Human Immunology"}},"results":[{"id":"W2048332030","doi":"10.1016/s0198-8859(00)00197-x","title":"Identification of HLA-G7 as a new splice variant of the HLA-G mRNA and expression of soluble HLA-G5, -G6, and -G7 transcripts in human transfected cells","year":2000,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":305,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"McMaster University","keywords":"Immunoprecipitation; Transfection; HLA-G; Human leukocyte antigen; Gene isoform; Intron; Alternative splicing; Molecular biology; Biology; Messenger RNA; RNA splicing; Open reading frame; Gene; Exon; splice; HEK 293 cells; Genetics; Peptide sequence; RNA; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.01046617734342921,"gpt":0.2307622634522183,"spread":0.2202960861087891,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003962358,0.0002229451,0.0006129723,0.0001826529,0.0001755673,0.000005976054,0.0003302561,0.0003703792,0.0007449451],"category_scores_gemma":[0.00002826848,0.0001811312,0.0001040599,0.0002038225,0.0007067187,0.0001251223,0.00005068838,0.0002916219,0.0000120281],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001698367,"about_ca_system_score_gemma":0.00006281349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001836551,"about_ca_topic_score_gemma":0.0001586965,"domain_scores_codex":[0.9976014,0.0006580342,0.0009108121,0.0004883343,0.00005457517,0.0002868506],"domain_scores_gemma":[0.9988,0.00007612192,0.000346335,0.0006733671,0.00008320279,0.00002091409],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002120332,0.0002149022,0.001136256,0.0001605747,0.0001192013,0.000001788158,0.007690995,0.00000397726,0.9867093,0.001773258,0.0001318973,0.001845803],"study_design_scores_gemma":[0.002584193,0.0003883918,0.09007964,0.0003207373,0.00007494468,0.0000774695,0.0004014234,4.843085e-7,0.9035773,0.001517249,0.0008203388,0.0001578223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9806332,0.0170208,0.00003370316,0.00009740684,0.0003265213,0.0006406237,0.00002077993,0.0000193129,0.001207651],"genre_scores_gemma":[0.9952747,0.0004592049,0.00001441356,0.0000128884,0.00001494397,0.00002190606,0.00002095973,0.00001987923,0.004161123],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08894338,"threshold_uncertainty_score":0.8156627,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2029667797","doi":"10.1016/s0198-8859(02)00373-7","title":"Relevance of KIR gene polymorphisms in bone marrow transplantation outcome","year":2002,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":151,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Genotype; Human leukocyte antigen; Immunology; Biology; Transplantation; Gene; Receptor; Allele; Genetics; Medicine; Antigen; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.02447563971425338,"gpt":0.242990797858477,"spread":0.2185151581442237,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001348617,0.0001627814,0.0003450151,0.0003232544,0.0001044868,0.000004460218,0.0001543126,0.0002865102,0.007147084],"category_scores_gemma":[0.00003690287,0.0001680496,0.00009826504,0.0001484996,0.0002176795,0.0001360805,0.00002365622,0.0003876453,0.001064912],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006007584,"about_ca_system_score_gemma":0.000006245505,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002146628,"about_ca_topic_score_gemma":0.00005955725,"domain_scores_codex":[0.9985969,0.0001911144,0.0006377573,0.0002474824,0.00002790588,0.0002988274],"domain_scores_gemma":[0.9993539,0.00007840765,0.000219273,0.0002939186,0.00004680481,0.000007725931],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001875961,0.0001933558,0.004671784,0.00001194221,0.0000582359,0.00001189517,0.0006328711,0.000005301821,0.9898697,0.001252826,0.001023622,0.002080902],"study_design_scores_gemma":[0.005416106,0.0007502288,0.1547083,0.00006682422,0.00005845541,0.0006667059,0.00019215,0.00001647077,0.7938907,0.0002240626,0.04358725,0.0004228353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983574,0.00870196,0.0001224387,0.0002310096,0.002228254,0.0001661853,0.000005630373,0.00006670851,0.004903764],"genre_scores_gemma":[0.9778488,0.0006826237,0.00004320356,0.0001384701,0.00001509957,0.00002130832,0.0001197224,0.0000176993,0.02111307],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.195979,"threshold_uncertainty_score":0.9997129,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2008163003","doi":"10.1016/s0198-8859(00)00234-2","title":"Analysis of HLA haplotypes in autoimmune hepatitis type 1: identifying the major susceptibility locus","year":2001,"lang":"en","type":"article","venue":"Human Immunology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Alberta Innovates - Health Solutions","keywords":"Haplotype; Allele; Locus (genetics); Human leukocyte antigen; Genetics; Biology; Autoimmune hepatitis; Genetic predisposition; Immunology; Population; Linkage disequilibrium; Gene; Hepatitis; Antigen; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.03303213964795444,"gpt":0.3100407717255106,"spread":0.2770086320775562,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002944038,0.0001244005,0.0004834278,0.0003426591,0.000134436,0.0000122843,0.0002335283,0.0000973253,0.002244913],"category_scores_gemma":[0.0001095383,0.00009432465,0.0002006935,0.001004852,0.0003420002,0.00007046312,0.0001410701,0.0002668932,0.00004499673],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000895274,"about_ca_system_score_gemma":0.00005728027,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01153461,"about_ca_topic_score_gemma":0.002251309,"domain_scores_codex":[0.998799,0.0001969412,0.0004214802,0.00020797,0.000126988,0.0002476006],"domain_scores_gemma":[0.9988132,0.00008718137,0.0001352875,0.000795458,0.0001421141,0.00002673707],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002642296,0.0003473554,0.9554307,0.00003557171,0.001630221,0.00003350254,0.0007674315,0.000007401711,0.0395407,0.0006096765,0.00004880851,0.001284341],"study_design_scores_gemma":[0.0007646082,0.0002495876,0.9962322,0.00003648273,0.001146199,0.0000102323,0.0004004903,0.0001206543,0.0004042849,0.0002299506,0.0003202888,0.00008508834],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936632,0.004921077,0.00001785427,0.00018952,0.0001240724,0.0002020759,0.000005943448,0.00003558722,0.0008406832],"genre_scores_gemma":[0.9981399,0.0006484799,0.00001920555,0.00007046402,0.00001671238,0.000008202811,0.0000753957,0.00001238807,0.001009229],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04080137,"threshold_uncertainty_score":0.9986672,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2033077607","doi":"10.1016/s0198-8859(00)00200-7","title":"HLA-G and HLA-E polymorphisms in an indigenous African population","year":2000,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":89,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Montreal General Hospital; McGill University; Centre Hospitalier de l’Université de Montréal; Université de Montréal","funders":"","keywords":"Genotyping; Allele; Genotype; Genetics; Biology; Human leukocyte antigen; HLA-A; Population; Null allele; Polymorphism (computer science); Allele frequency; Gene; Medicine; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.01326483223657937,"gpt":0.2571283464337378,"spread":0.2438635141971584,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002209095,0.000201018,0.0003653516,0.0002339905,0.0002924385,0.0000174709,0.0002082269,0.0003284157,0.002176533],"category_scores_gemma":[0.00001175094,0.0001954522,0.00003975514,0.0001451882,0.0002688496,0.0001850577,0.00004283523,0.000288845,0.0003921542],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005153713,"about_ca_system_score_gemma":0.00001985006,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002352573,"about_ca_topic_score_gemma":0.0004346778,"domain_scores_codex":[0.9981474,0.0004879367,0.0003751064,0.0005185557,0.00002379016,0.0004471944],"domain_scores_gemma":[0.9993236,0.00002949107,0.00009788749,0.0005043481,0.00002634857,0.00001834755],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002381847,0.000379509,0.3231247,0.00001759803,0.000160878,0.0000366333,0.01280576,0.00000791487,0.4651743,0.003032625,0.00005889475,0.194963],"study_design_scores_gemma":[0.001113198,0.000525068,0.988723,0.00003220366,0.00001449197,0.0002435947,0.0002499636,2.784373e-7,0.00286256,0.001466558,0.004523634,0.0002454459],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9783106,0.01715065,0.000002807963,0.0000623327,0.0002938467,0.0003337585,0.000008881136,0.00008648276,0.003750595],"genre_scores_gemma":[0.9954205,0.00008960805,0.00002690508,0.0000433614,0.00003910431,0.00004319323,0.0001789859,0.00002270369,0.004135606],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6655983,"threshold_uncertainty_score":0.9987356,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2549381813","doi":"10.1016/j.humimm.2016.11.006","title":"Natural killer cell subsets and receptor expression in peripheral blood mononuclear cells of a healthy Korean population: Reference range, influence of age and sex, and correlation between NK cell receptors and cytotoxicity","year":2016,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"Ministry of Education, Science and Technology; National Research Foundation of Korea; Korea Research Institute of Bioscience and Biotechnology; Chonnam National University","keywords":"NKG2D; CD16; Peripheral blood mononuclear cell; Receptor; Cell; Flow cytometry; Immunology; Population; Natural killer cell; Receptor expression; Cytotoxicity; Biology; CD8; CD3; Molecular biology; Immune system; Medicine; In vitro; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01115602471518722,"gpt":0.2298676297775525,"spread":0.2187116050623653,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001946093,0.0001899456,0.000407493,0.0001884961,0.0001481237,0.0000088777,0.0000641418,0.0003552425,0.0002075025],"category_scores_gemma":[0.00002585958,0.0001551449,0.00002432183,0.00006876639,0.0004343983,0.0002377057,0.0001136704,0.0003249423,0.000005362243],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003043594,"about_ca_system_score_gemma":0.00001158882,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000386791,"about_ca_topic_score_gemma":0.00004716645,"domain_scores_codex":[0.9985506,0.0003594317,0.0004939858,0.000343541,0.00003393204,0.0002185181],"domain_scores_gemma":[0.9992374,0.0001787693,0.0003386647,0.0001755039,0.00004624412,0.00002343492],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004176085,0.00006856341,0.07632358,0.00006348858,0.00002325155,7.978124e-7,0.001179161,9.349547e-7,0.9209466,0.00004967989,0.0001167255,0.0008096193],"study_design_scores_gemma":[0.0040366,0.0009199654,0.6119452,0.0001756327,0.00003135992,0.00002031843,0.0003237846,0.000002543078,0.3812594,0.00006511012,0.001000383,0.0002197579],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962566,0.002931319,0.000009795477,0.00004096913,0.0003416899,0.0002512388,0.000007319569,0.00002003934,0.0001410079],"genre_scores_gemma":[0.9963545,0.001533716,0.00008063694,0.00002412348,0.00001008112,0.000007452043,0.00005849622,0.00001488814,0.001916121],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5396872,"threshold_uncertainty_score":0.6326627,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1988765770","doi":"10.1016/j.humimm.2013.07.014","title":"Human leukocyte antigen alleles and susceptibility to psoriatic arthritis","year":2013,"lang":"en","type":"article","venue":"Human Immunology","topic":"Spondyloarthritis Studies and Treatments","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Memorial University of Newfoundland; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Public Health Ontario; University of Toronto; Toronto Western Hospital","funders":"Institute of Musculoskeletal Health and Arthritis; Canadian Institutes of Health Research; Krembil Foundation; Arthritis Society","keywords":"Psoriatic arthritis; Allele; Immunology; Arthritis; Antigen; Human leukocyte antigen; Medicine; Biology; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01765289859092662,"gpt":0.2787967277379757,"spread":0.2611438291470491,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007096626,0.0001941872,0.0004610242,0.0001050367,0.0003740754,0.0000292861,0.00007411497,0.0001029798,0.001490519],"category_scores_gemma":[0.00003615887,0.0001775251,0.0000666474,0.00007762029,0.0002354075,0.00006661142,0.0001466095,0.0001381871,0.0005032622],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000658299,"about_ca_system_score_gemma":0.00001617848,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001621242,"about_ca_topic_score_gemma":0.001475116,"domain_scores_codex":[0.9987785,0.00004795625,0.0002945595,0.0003840953,0.0000989279,0.0003959942],"domain_scores_gemma":[0.9993214,0.00002104275,0.00005459511,0.0004022373,0.00009220333,0.0001085107],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002082299,0.001377163,0.4519023,0.0001257554,0.002011609,0.0004109686,0.00444103,5.275776e-7,0.319508,0.009444697,0.0124548,0.1981148],"study_design_scores_gemma":[0.003531704,0.001660314,0.9857804,0.00007269967,0.00003351432,0.0001026945,0.0004286407,6.217101e-7,0.001190584,0.00124305,0.00578724,0.0001685614],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.989915,0.006014472,0.000003030654,0.0006073645,0.0001244906,0.0007183593,0.000004102114,0.00008626048,0.002526988],"genre_scores_gemma":[0.9972109,0.0006555715,0.0002957613,0.0003209766,0.00009287877,0.0001304194,0.00002897719,0.00002326188,0.0012413],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.533878,"threshold_uncertainty_score":0.9994223,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2039475259","doi":"10.1016/j.humimm.2014.12.016","title":"Impact of three Illumina library construction methods on GC bias and HLA genotype calling","year":2014,"lang":"en","type":"article","venue":"Human Immunology","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Center for Advancing Translational Sciences","keywords":"Genotyping; Genetics; Genotype; Biology; Computational biology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.05913366193162925,"gpt":0.3651801495592727,"spread":0.3060464876276434,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007617892,0.00009814803,0.0002598827,0.0001187636,0.00005470117,0.000005719912,0.00003279099,0.00008190717,0.0001964971],"category_scores_gemma":[0.00001788345,0.00007066564,0.00007708802,0.00005475951,0.0001561975,0.00004529551,0.00001135127,0.0001005455,0.00001054858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001467891,"about_ca_system_score_gemma":0.00001869873,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008559427,"about_ca_topic_score_gemma":0.000003443197,"domain_scores_codex":[0.999438,0.00008979229,0.000181221,0.0001324669,0.00004627752,0.0001122258],"domain_scores_gemma":[0.9995674,0.0001373504,0.00008543728,0.0001573572,0.00001941785,0.00003299078],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008962022,0.0001852214,0.7882478,0.0001525622,0.001188647,0.00002580334,0.0004744587,0.0000123793,0.06252638,0.02517354,0.00001270134,0.1211043],"study_design_scores_gemma":[0.001948387,0.001782265,0.9864655,0.0001035678,0.0001194165,0.0001456779,0.00001893487,0.00004729832,0.007320823,0.0017892,0.0001905915,0.00006836054],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948253,0.0003223206,0.00142023,0.00004788781,0.00008241039,0.0001134885,0.000004818996,0.00003062493,0.003152919],"genre_scores_gemma":[0.9875852,0.0001649204,0.01195344,0.00004026898,0.00002917005,0.000003254849,0.00004229969,0.00001378794,0.0001675979],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1982177,"threshold_uncertainty_score":0.2881661,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2011412954","doi":"10.1016/s0198-8859(01)00344-5","title":"CTLA-4/CD 28 region polymorphisms in children from families with autoimmune hepatitis","year":2001,"lang":"en","type":"article","venue":"Human Immunology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"Medical Research Council; Canadian Liver Foundation; Alberta Innovates - Health Solutions","keywords":"Autoimmune hepatitis; Biology; Allele; Human leukocyte antigen; Genetics; Transmission disequilibrium test; Immunology; CTLA-4; Gene; Haplotype; Antigen; Hepatitis; T cell; Immune system","retraction":null,"screen_n_in":null,"score":{"opus":0.01194679153112044,"gpt":0.2275947154414995,"spread":0.215647923910379,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004881616,0.0002204977,0.0004353326,0.0002321196,0.0001636973,0.00001809719,0.0002057402,0.0001554116,0.0007524973],"category_scores_gemma":[0.00001754408,0.0001891875,0.00008441644,0.0002248955,0.0003345959,0.0001342341,0.0001086856,0.0003689422,0.0001106776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001163179,"about_ca_system_score_gemma":0.00007400698,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03587725,"about_ca_topic_score_gemma":0.0003507258,"domain_scores_codex":[0.9987758,0.0001081881,0.000300619,0.0003097654,0.0001294826,0.0003761064],"domain_scores_gemma":[0.9990556,0.00003191314,0.0001065597,0.0006969482,0.00005259737,0.00005639201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004605408,0.0003576795,0.9846904,0.000004721952,0.0002838575,0.0001997462,0.0005282566,9.118954e-7,0.009567061,0.0004282479,0.0002257098,0.003252922],"study_design_scores_gemma":[0.003632135,0.0007866411,0.9930551,0.0001481167,0.0001072297,0.000322533,0.0001907642,0.000008139432,0.0004141066,0.0002953833,0.0008308462,0.0002089878],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920533,0.004658558,0.00002290616,0.000454253,0.00009098282,0.0003373477,0.00001136178,0.0001218653,0.002249381],"genre_scores_gemma":[0.9953104,0.00213622,0.0000814065,0.0003155384,0.00007486832,0.00003157099,0.0003922269,0.00003538006,0.001622373],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03552652,"threshold_uncertainty_score":0.9705429,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1968461466","doi":"10.1016/j.humimm.2009.08.001","title":"Genetic association study of FOXP3 polymorphisms in allergic rhinitis in a Chinese population","year":2009,"lang":"en","type":"article","venue":"Human Immunology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hotel Dieu Hospital; Hôtel-Dieu de Montréal; McGill University; Université de Montréal","funders":"Program for New Century Excellent Talents in University; Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China","keywords":"Association (psychology); Genetic association; Chinese population; Population; Medicine; Genotype; Genetics; Immunology; Single-nucleotide polymorphism; Biology; Environmental health; Gene; Psychology","retraction":null,"screen_n_in":null,"score":{"opus":0.01112249763547888,"gpt":0.2846704962692568,"spread":0.2735479986337779,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008952068,0.00009273516,0.0002974263,0.0003176984,0.00002881121,0.00000300332,0.00005557694,0.0001032586,0.0001003256],"category_scores_gemma":[0.0000696213,0.00008356618,0.00003922895,0.0002068212,0.0000157978,0.00003653467,0.00001477522,0.0001316836,0.000007449402],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001305409,"about_ca_system_score_gemma":0.00002250659,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005843886,"about_ca_topic_score_gemma":0.0009510799,"domain_scores_codex":[0.9990696,0.000133193,0.0003681284,0.0001504607,0.000119506,0.0001591701],"domain_scores_gemma":[0.9996213,0.00002300601,0.0001413413,0.0001641013,0.0000290643,0.00002114318],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001140674,0.001259472,0.9865512,0.000004213681,0.00002092709,0.00007728178,0.001036834,0.0000231544,0.007243702,0.00002883109,0.00001082069,0.003629525],"study_design_scores_gemma":[0.003470502,0.001437971,0.99432,0.00002871083,0.00001555321,0.000005446234,0.000231316,0.00001458477,0.00001793264,0.0003752719,0.00001660874,0.00006610312],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983006,0.0008847621,7.708956e-7,0.00009904486,0.00005240418,0.0003417297,0.000001021067,0.00001845964,0.0003012848],"genre_scores_gemma":[0.9996769,0.00001518206,0.00001208888,0.0001006251,0.00003743409,0.00001371658,0.00001594944,0.000007627865,0.0001204469],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007768828,"threshold_uncertainty_score":0.340773,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994275758","doi":"10.1016/j.humimm.2011.01.010","title":"Human leukocyte antigen (HLA)-E and HLA-G polymorphisms in human papillomavirus infection susceptibility and persistence","year":2011,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal; Queen's University; McGill University","funders":"Canadian Institutes of Health Research; Centre National de la Recherche Scientifique; McGill University","keywords":"Human leukocyte antigen; Immunology; Persistence (discontinuity); Human papillomavirus; Antigen; Biology; Virology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.05239816171764605,"gpt":0.259179098903579,"spread":0.2067809371859329,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005581201,0.0003459631,0.0005953304,0.0003212857,0.0007554322,0.0000220255,0.0002233502,0.000495078,0.000823101],"category_scores_gemma":[0.0000383754,0.0003394572,0.00008987398,0.0001464296,0.001459483,0.0002378454,0.0002603394,0.0005032329,0.00009796039],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007932512,"about_ca_system_score_gemma":0.00002604663,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005419231,"about_ca_topic_score_gemma":0.001427904,"domain_scores_codex":[0.9972152,0.0006757909,0.0005755306,0.0009308624,0.00003636692,0.0005662284],"domain_scores_gemma":[0.9988992,0.00003197358,0.0002439747,0.0007159024,0.00007686597,0.00003210732],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003844782,0.0001272217,0.3662455,0.00002606917,0.0001146628,0.00001258324,0.003018822,5.259585e-8,0.6252064,0.003588894,0.00003354885,0.001587801],"study_design_scores_gemma":[0.001519975,0.0007904378,0.9319886,0.00008572941,0.000032902,0.0002333432,0.0003460009,6.702178e-8,0.0614242,0.002302251,0.0009341011,0.0003423767],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9738154,0.01911917,0.00001024366,0.00002378175,0.000418696,0.0004669947,0.000006388562,0.0001110427,0.006028255],"genre_scores_gemma":[0.9974412,0.0002400735,0.00002923062,0.0000316678,0.00003512247,0.00004750452,0.00003948308,0.00002830462,0.002107356],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5657431,"threshold_uncertainty_score":0.9999058,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2767265166","doi":"10.1016/j.humimm.2017.10.020","title":"Rapid optimized flow cytometric crossmatch (FCXM) assays: The Halifax and Halifaster protocols","year":2017,"lang":"en","type":"article","venue":"Human Immunology","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Dalhousie University","funders":"","keywords":"Donor specific antibodies; Human leukocyte antigen; Concordance; Medicine; Antigen; Immunology; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.07631441364014814,"gpt":0.3672760562208737,"spread":0.2909616425807256,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002193131,0.0001862167,0.0003967058,0.000139111,0.0008341008,0.0001827178,0.0003194628,0.0001262612,0.0004499615],"category_scores_gemma":[0.00008842557,0.0001118694,0.0001069023,0.00006696344,0.0004047472,0.0001139216,0.0001035883,0.0002126377,0.0001155599],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003039653,"about_ca_system_score_gemma":0.00003078974,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001249189,"about_ca_topic_score_gemma":0.00001197951,"domain_scores_codex":[0.9989446,0.00008498903,0.0002828756,0.000258885,0.0001520824,0.0002765325],"domain_scores_gemma":[0.9985408,0.00009800046,0.0001896709,0.001039223,0.00007437554,0.00005796308],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0137307,0.003301373,0.7195668,0.002185086,0.01129797,0.002833658,0.008616555,0.00003120262,0.05541196,0.009133564,0.004805416,0.1690857],"study_design_scores_gemma":[0.01824239,0.0009393299,0.9631969,0.0003180892,0.0002538593,0.000633024,0.00009084185,0.00008783601,0.003318159,0.0004220058,0.01227255,0.0002249817],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9364688,0.001916028,0.000717347,0.007228074,0.0005236639,0.02312003,0.0001038774,0.0002118607,0.02971026],"genre_scores_gemma":[0.9854715,0.0002812293,0.00302474,0.0004841785,0.0001077765,0.00334088,0.00007542988,0.00003935672,0.007174838],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2436301,"threshold_uncertainty_score":0.6415313,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2182386828","doi":"10.1016/s0198-8859(00)00157-9","title":"Oligoclonal expansions in the CD8+CD28− T cells largely explain the shorter telomeres detected in this subset:","year":2000,"lang":"en","type":"article","venue":"Human Immunology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Terry Fox Research Institute","funders":"","keywords":"Telomere; CD28; CD8; Biology; Flow cytometry; Cytotoxic T cell; Population; Molecular biology; T cell; Antigen; Immunology; Genetics; Immune system; Gene; Medicine; In vitro","retraction":null,"screen_n_in":null,"score":{"opus":0.02085038735282592,"gpt":0.267166805654672,"spread":0.2463164183018461,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005125537,0.0002978887,0.000451152,0.0003167452,0.0003036531,0.00003354022,0.0005865492,0.0002557432,0.006715183],"category_scores_gemma":[0.00005936546,0.0001835548,0.0001165848,0.0006422704,0.0004950095,0.00009312722,0.00006025776,0.0009683935,0.0003884306],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007956627,"about_ca_system_score_gemma":0.000101543,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001162947,"about_ca_topic_score_gemma":0.003013948,"domain_scores_codex":[0.9974576,0.0005067588,0.0005875071,0.0004377373,0.0002851061,0.0007252701],"domain_scores_gemma":[0.9986162,0.0003364639,0.000074761,0.0008692636,0.0000477596,0.00005556335],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001550329,0.002341252,0.07962155,0.0000850986,0.0003100898,0.002069932,0.05979596,0.00002519048,0.7684808,0.00253163,0.01352536,0.06966285],"study_design_scores_gemma":[0.002706066,0.0004699354,0.924739,0.0001395104,0.00005473573,0.0003779576,0.004009028,0.00005130999,0.01496988,0.0003688777,0.05171901,0.0003947165],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908758,0.002039974,0.000002552789,0.001663544,0.0001540885,0.0005834467,0.00001345112,0.0000720605,0.00459502],"genre_scores_gemma":[0.9948329,0.0006326198,0.00005454576,0.001885548,0.0001193301,0.0001298822,0.00004710701,0.00003483651,0.002263261],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8451174,"threshold_uncertainty_score":0.9941928,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W76447225","doi":"10.1016/s0198-8859(03)00162-9","title":"HLA is a candidate region for psoriatic arthritis","year":2003,"lang":"en","type":"article","venue":"Human Immunology","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Memorial University of Newfoundland; Arthritis Society; University of Toronto; Toronto Western Hospital","funders":"","keywords":"Haplotype; Genetics; Biology; Proband; Sibling; Amplicon; Psoriatic arthritis; Locus (genetics); Polymerase chain reaction; Molecular biology; Genotype; Psoriasis; Immunology; Gene; Mutation","retraction":null,"screen_n_in":null,"score":{"opus":0.03673664703530233,"gpt":0.3219259003003814,"spread":0.285189253265079,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002621869,0.0001363161,0.0004006259,0.0001862047,0.0001605389,0.00001492322,0.0001076345,0.0001646763,0.0004450829],"category_scores_gemma":[0.0002779463,0.0001248321,0.0001091624,0.0001241514,0.0001415467,0.00003671484,0.00002565025,0.0001791099,0.0002000635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001310277,"about_ca_system_score_gemma":0.0001335266,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006634998,"about_ca_topic_score_gemma":0.00003482943,"domain_scores_codex":[0.9986777,0.0001122999,0.0003215121,0.0002918058,0.0001425229,0.0004541665],"domain_scores_gemma":[0.9990579,0.00009993716,0.00008756658,0.0005458786,0.0001414267,0.00006731389],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002291354,0.001433241,0.1073301,0.003766305,0.003606557,0.001330274,0.02570161,0.000001115924,0.1831041,0.2593992,0.3581113,0.05392485],"study_design_scores_gemma":[0.03800857,0.004184193,0.004565297,0.002007991,0.0002335139,0.07085785,0.003603409,0.00007326829,0.03819756,0.02154395,0.8158361,0.0008882924],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.980628,0.006910714,0.0004271397,0.0007723547,0.0004509079,0.00118149,0.000005529665,0.00009242455,0.009531427],"genre_scores_gemma":[0.9839534,0.0005191967,0.0003152471,0.0003185372,0.000116844,0.0002784501,0.00002194758,0.00004485354,0.01443155],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4577248,"threshold_uncertainty_score":0.5090507,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2082639172","doi":"10.1016/j.humimm.2012.05.002","title":"The aryl hydrocarbon receptor (AhR) ligand VAF347 selectively acts on monocytes and naïve CD4+ Th cells to promote the development of IL-22-secreting Th cells","year":2012,"lang":"en","type":"article","venue":"Human Immunology","topic":"IL-33, ST2, and ILC Pathways","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Hôpital Notre-Dame; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Aryl hydrocarbon receptor; Cell biology; Interleukin 22; Interleukin 12; Antigen-presenting cell; Chemistry; Biology; Interleukin 21; Immunology; Immune system; T cell; Transcription factor; Cytokine; Interleukin; In vitro; Cytotoxic T cell; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01739809406798724,"gpt":0.2315051653724527,"spread":0.2141070713044654,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0009452993,0.0004199111,0.0005051062,0.0001432663,0.001380056,0.00003424165,0.0005657638,0.0004078122,0.00005760005],"category_scores_gemma":[0.0001420143,0.000270314,0.00008760754,0.0002117527,0.0005431242,0.0001029378,0.0003507432,0.0006864314,0.0003530565],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001099121,"about_ca_system_score_gemma":0.0001511349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005045317,"about_ca_topic_score_gemma":0.00005205868,"domain_scores_codex":[0.997488,0.000329646,0.0006089217,0.0004626983,0.00007999762,0.001030735],"domain_scores_gemma":[0.998394,0.0005377939,0.0003690878,0.0005270042,0.0001206943,0.0000514437],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003341295,0.0001633524,0.0002788801,0.00002085695,0.0004012903,6.690802e-7,0.01675664,0.000001465603,0.9750855,0.001294682,0.0007824871,0.004880043],"study_design_scores_gemma":[0.0007337708,0.0006637482,0.006786422,0.00006847431,0.00004015588,0.00001626839,0.001187545,8.16014e-7,0.8551826,0.0001568207,0.1348711,0.000292275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99106,0.002545866,0.00002267402,0.0001082732,0.001259453,0.0007140718,0.00007897322,0.00007399472,0.004136759],"genre_scores_gemma":[0.9975328,0.0003649304,0.0002442038,0.0001284985,0.0001031259,0.00008193749,0.00003898439,0.00004559934,0.00145993],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1340886,"threshold_uncertainty_score":0.9999749,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1974071414","doi":"10.1016/s0198-8859(00)00191-9","title":"Modulation of HLA-G antigens expression in myelomonocytic cells","year":2000,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institut national de la recherche scientifique","keywords":"Antigen; Biology; Immunology; Macrophage; Immune system; Antigen presentation; Dendritic cell; T cell; In vitro","retraction":null,"screen_n_in":null,"score":{"opus":0.01554262806162551,"gpt":0.2457578253207984,"spread":0.2302151972591729,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001931541,0.000151073,0.000361503,0.0001857084,0.0001005856,0.000003587177,0.0002057641,0.0002823169,0.004970025],"category_scores_gemma":[0.00001217865,0.0001413736,0.00007139068,0.0001345143,0.0002385316,0.0000930259,0.00004130245,0.0002041609,0.0007501339],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003424666,"about_ca_system_score_gemma":0.00002450335,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001401407,"about_ca_topic_score_gemma":0.00001816529,"domain_scores_codex":[0.9984826,0.0003720596,0.0004660115,0.0003592096,0.00002378854,0.0002963738],"domain_scores_gemma":[0.99926,0.00004304752,0.0001379843,0.0005098316,0.00004189245,0.000007246018],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006510146,0.0001086291,0.004709185,0.0000211218,0.00004075366,0.000003677474,0.001087803,0.00006035344,0.9865091,0.00040763,0.0001601502,0.006826443],"study_design_scores_gemma":[0.00128701,0.0001996652,0.2815141,0.0001320834,0.000008852318,0.00003011576,0.0001213009,0.000001497995,0.7107613,0.001030224,0.004747188,0.000166677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9810462,0.009234757,0.00002605574,0.00001889109,0.0004261996,0.0002676919,0.000006365003,0.00004034459,0.008933487],"genre_scores_gemma":[0.9929855,0.0001675835,0.00004954934,0.00000974323,0.00002115151,0.00001956718,0.00004661907,0.00001474836,0.006685476],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2768049,"threshold_uncertainty_score":0.9959396,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2040784950","doi":"10.1016/j.humimm.2009.11.005","title":"Alveolar macrophages in allergic asthma: An expression signature characterized by heat shock protein pathways","year":2009,"lang":"en","type":"article","venue":"Human Immunology","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Institut Universitaire de Cardiologie et de Pneumologie de Québec; Université du Québec à Chicoutimi; Université de Montréal; Université Laval","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Heat shock protein; Immunology; Immune system; Gene; Asthma; Biology; Gene expression; Phenotype; Context (archaeology); Medicine; Molecular biology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01199196115680001,"gpt":0.2693539092917362,"spread":0.2573619481349362,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000301442,0.000304333,0.0003311532,0.0001465146,0.0001942403,0.00004502917,0.0005662962,0.0006693589,0.000242172],"category_scores_gemma":[0.00004133727,0.0002923555,0.00009003991,0.0001273864,0.0001314654,0.00001926211,0.0001995636,0.0006044382,0.00003384616],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000527159,"about_ca_system_score_gemma":0.00007801889,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000327561,"about_ca_topic_score_gemma":0.00002363154,"domain_scores_codex":[0.9975451,0.0004933976,0.0003610245,0.0007085435,0.0001936537,0.0006982647],"domain_scores_gemma":[0.9990038,0.000006249871,0.00005623835,0.0007428001,0.00007680304,0.0001141142],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003428219,0.0003339337,0.0000525561,0.00001347373,0.00001965281,0.00005317663,0.00008552505,0.000002550984,0.9954653,0.00005521113,0.0003072707,0.003268503],"study_design_scores_gemma":[0.001618156,0.00202472,0.004076099,0.00003903987,0.000001651106,0.00002338442,0.00004754446,0.000008747531,0.9684055,0.0001789043,0.02326199,0.0003142015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931381,0.005095515,0.0001359434,0.0001919165,0.00003823828,0.0009673723,0.00002617566,0.00004545644,0.0003612866],"genre_scores_gemma":[0.9971763,0.0001807181,0.0002978889,0.000219934,0.000154596,0.0002467959,0.0006729891,0.0000418269,0.001008928],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02705977,"threshold_uncertainty_score":0.9999529,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2068275862","doi":"10.1016/j.humimm.2003.11.004","title":"Cell surface expression of MHC class I antigen is suppressed in indoleamine 2,3-dioxygenase genetically modified keratinocytes: implications in allogeneic skin substitute engraftment","year":2004,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Indoleamine 2,3-dioxygenase; Immunology; MHC class I; Major histocompatibility complex; Antigen; Biology; Immune tolerance; Transfection; Immune system; Keratinocyte; Cancer research; Cell biology; Cell culture; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02049123117601713,"gpt":0.2567498972338919,"spread":0.2362586660578747,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003118795,0.0003395514,0.0006733323,0.0003155418,0.000175344,0.00001449246,0.0005205741,0.0005233669,0.0002491691],"category_scores_gemma":[0.00003711607,0.0003274409,0.000121435,0.0002985266,0.0004848675,0.00009846563,0.000189225,0.0004207955,0.000120129],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001365338,"about_ca_system_score_gemma":0.000173559,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006475807,"about_ca_topic_score_gemma":0.0002371932,"domain_scores_codex":[0.9970865,0.0005020755,0.0009709891,0.0007858638,0.00005483531,0.0005997304],"domain_scores_gemma":[0.9984412,0.00008800697,0.0002943588,0.001025342,0.0001239469,0.00002716645],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001234474,0.0007493385,0.007433847,0.00004834169,0.00006879934,0.00001194747,0.002538771,0.001009586,0.986007,0.001790427,0.00008209161,0.0001363423],"study_design_scores_gemma":[0.003596438,0.0002298354,0.2415213,0.0001134684,0.000007680601,0.00002115217,0.0001511852,6.303598e-7,0.7529647,0.000620927,0.0005447849,0.0002279292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9714908,0.02608316,0.0002091033,0.000161423,0.0002169752,0.0008934612,0.000061999,0.00004127419,0.0008417979],"genre_scores_gemma":[0.9982371,0.0004768124,0.000350975,0.00004999696,0.00001845101,0.000121468,0.0002141981,0.00003127869,0.0004997567],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2340875,"threshold_uncertainty_score":0.9999177,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2052999387","doi":"10.1016/j.humimm.2014.10.004","title":"Anti-pneumococcal deficits of monocyte-derived macrophages from the advanced-age, frail elderly and related impairments in PI3K-AKT signaling","year":2014,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Streptococcus pneumoniae; PI3K/AKT/mTOR pathway; Protein kinase B; Immunology; Monocyte; Phagocytosis; Macrophage; Disease; Signal transduction; Biology; Medicine; Microbiology; Cell biology; Internal medicine; Antibiotics; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.009643300977267314,"gpt":0.2384353897888987,"spread":0.2287920888116314,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003740432,0.0003363906,0.0007121575,0.0001561013,0.0003016411,0.000017755,0.0005749174,0.0005371636,0.0007043798],"category_scores_gemma":[0.0001106325,0.0002827855,0.0001063263,0.0001747591,0.001089207,0.0001040014,0.0003213595,0.0008398833,0.0001356333],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006765846,"about_ca_system_score_gemma":0.00003897526,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006256867,"about_ca_topic_score_gemma":0.00009700397,"domain_scores_codex":[0.9973354,0.0007347997,0.0007549102,0.0005323103,0.00004658856,0.0005960285],"domain_scores_gemma":[0.9983299,0.0005861096,0.0003608873,0.0006440372,0.0000640166,0.00001507244],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001822018,0.0001170552,0.006861527,0.00001512994,0.0002923533,0.00002453668,0.001957856,0.00005181389,0.9823276,0.0003602513,0.00005950507,0.007750152],"study_design_scores_gemma":[0.008107631,0.001326666,0.3752464,0.0002483341,0.0001135344,0.0001314794,0.001367807,0.000008776922,0.6051207,0.004023717,0.003726258,0.000578716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.975533,0.02236066,0.00003409743,0.0001211285,0.0008936708,0.0003667297,0.00001750897,0.000071656,0.0006015298],"genre_scores_gemma":[0.998733,0.0004006178,0.00009516683,0.00008942467,0.00001932931,0.00004324534,0.00009848683,0.00004605634,0.0004747174],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3772069,"threshold_uncertainty_score":0.9999624,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2021525821","doi":"10.1016/j.humimm.2010.06.015","title":"LILRB1 polymorphism and surface phenotypes of natural killer cells","year":2010,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Biology; Locus (genetics); Gene; Phenotype; Human leukocyte antigen; Single-nucleotide polymorphism; Receptor; Gene expression; Genetics; Immune system; Molecular biology; Genotype; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.006597109214834528,"gpt":0.2175906373891771,"spread":0.2109935281743426,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000118046,0.0001673495,0.0002758257,0.0001138227,0.0002041882,0.000009782882,0.000166899,0.0003205826,0.005938159],"category_scores_gemma":[0.00002980364,0.0001524386,0.00007296832,0.00006460366,0.0005484828,0.0001063205,0.000103059,0.0007203958,0.0005675395],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001121962,"about_ca_system_score_gemma":0.00001963351,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002832224,"about_ca_topic_score_gemma":0.00005054586,"domain_scores_codex":[0.9990653,0.0001042656,0.0003031606,0.0002401731,0.00002112964,0.0002659454],"domain_scores_gemma":[0.9993382,0.00008872506,0.0001633897,0.0003124463,0.00008635147,0.00001090704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001303578,0.00007762211,0.0003766231,0.00000665135,0.0001413723,9.206955e-7,0.0003520724,3.944537e-7,0.9859573,0.005457876,0.006432645,0.001066131],"study_design_scores_gemma":[0.001308149,0.0002544358,0.01373451,0.00001115676,0.00003431598,0.0001251378,0.0002379724,0.000002672918,0.7966619,0.0001982688,0.1872255,0.0002059597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9757931,0.003663764,0.00000915173,0.000130075,0.01633773,0.0001095043,0.000001251894,0.00006663256,0.003888776],"genre_scores_gemma":[0.9529283,0.00007818691,0.00006615058,0.0001085896,0.00003059197,0.00000324626,0.00004875342,0.00001698309,0.04671918],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1892954,"threshold_uncertainty_score":0.9949706,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1965615590","doi":"10.1016/j.humimm.2010.03.006","title":"CD209 (DC-SIGN) −336A&gt;G promoter polymorphism and severe acute respiratory syndrome in Hong Kong Chinese","year":2010,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre","funders":"Food and Health Bureau","keywords":"Immune system; Immunology; SNP; Biology; Genotype; Single-nucleotide polymorphism; Medicine; Virology; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.008531338461380732,"gpt":0.2367215659086751,"spread":0.2281902274472944,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003080054,0.0003587385,0.0004856485,0.0005004797,0.0003699978,0.00003826483,0.0003046311,0.0007470207,0.004375535],"category_scores_gemma":[0.00006489716,0.0003288892,0.0001073103,0.0001908624,0.000510453,0.0003572452,0.0002145871,0.001568643,0.00119291],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005576057,"about_ca_system_score_gemma":0.00004680151,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000159623,"about_ca_topic_score_gemma":0.0002955006,"domain_scores_codex":[0.9980161,0.000278622,0.0005436819,0.0005476594,0.00003988383,0.0005740524],"domain_scores_gemma":[0.9990484,0.00008075227,0.0001993274,0.0005754812,0.00006799393,0.00002808285],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002135504,0.0001533195,0.01455384,0.00001024427,0.000239759,0.00007968768,0.0004706497,1.680459e-7,0.9809698,0.000963066,0.001090201,0.001255688],"study_design_scores_gemma":[0.004006195,0.0008595151,0.9103855,0.00005064866,0.0000583591,0.004388696,0.0001359779,0.000001684277,0.02783556,0.0005063236,0.05116998,0.0006015474],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896834,0.001859541,0.0000100208,0.0003168324,0.004787968,0.0003362159,0.000005913751,0.0001469459,0.002853113],"genre_scores_gemma":[0.9815958,0.00003556343,0.00001896339,0.0003516506,0.00005141957,0.0000505983,0.00008922783,0.00004433081,0.01776249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9531342,"threshold_uncertainty_score":0.9999163,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2092788210","doi":"10.1016/j.humimm.2013.08.279","title":"The association between human leukocyte antigen (HLA)-G polymorphisms and human papillomavirus (HPV) infection in Inuit women of northern Quebec","year":2013,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University","funders":"","keywords":"Genotype; Human leukocyte antigen; HLA-G; HPV infection; Immunology; Allele; Immune system; Biology; Human papillomavirus; Antigen; Cervical cancer; Medicine; Internal medicine; Genetics; Gene; Cancer","retraction":null,"screen_n_in":null,"score":{"opus":0.01146865014987826,"gpt":0.2355820608821436,"spread":0.2241134107322653,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007683628,0.0002659301,0.000591382,0.0002447942,0.0007594757,0.00004186751,0.0002888409,0.0005036562,0.0004743089],"category_scores_gemma":[0.0000692671,0.0002186767,0.00008685903,0.0001809695,0.0005164122,0.0002482585,0.000178061,0.0004661198,0.0002130446],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005018031,"about_ca_system_score_gemma":0.00005899245,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.06350371,"about_ca_topic_score_gemma":0.04257317,"domain_scores_codex":[0.9972298,0.0008754617,0.0007576941,0.0004582635,0.00006127311,0.0006175291],"domain_scores_gemma":[0.9984483,0.0001668723,0.0006387834,0.0005619613,0.0001633659,0.00002079378],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001012726,0.00004346525,0.5592459,0.00001104432,0.0003415134,7.605033e-7,0.003091587,3.066521e-7,0.4298472,0.001773373,0.00004552486,0.005589159],"study_design_scores_gemma":[0.001205089,0.0003703296,0.9670949,0.00004414205,0.00002410524,0.000008441864,0.0002931905,2.274937e-8,0.02579862,0.002454255,0.002489737,0.000217194],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921777,0.005438503,0.00000256169,0.00008705186,0.0002976995,0.0006390479,0.00001101645,0.00006407079,0.00128239],"genre_scores_gemma":[0.9913247,0.0001538749,0.000001531307,0.00001394767,0.00007037402,0.0001642656,0.00006611008,0.00002876114,0.008176462],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.407849,"threshold_uncertainty_score":0.9748974,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2019398574","doi":"10.1016/s0198-8859(02)00446-9","title":"The nature and mechanisms of DN regulatory T-Cell mediated suppression","year":2002,"lang":"en","type":"article","venue":"Human Immunology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; Roche Organ Transplant Research Foundation","keywords":"CD8; Cytotoxic T cell; T-cell receptor; T cell; Antigen-presenting cell; Cell biology; Biology; Interleukin 21; Major histocompatibility complex; T lymphocyte; Immunology; Immune system; Molecular biology; In vitro; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.008609447899298638,"gpt":0.205709311162871,"spread":0.1970998632635724,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002899098,0.0003041788,0.0004698205,0.0001623157,0.0008005204,0.00001517473,0.0006000315,0.001212663,0.001607894],"category_scores_gemma":[0.00007545261,0.0002156295,0.0001148948,0.000139606,0.001510224,0.00007605214,0.0003505386,0.001130521,0.0004373587],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002704086,"about_ca_system_score_gemma":0.00001866044,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003990984,"about_ca_topic_score_gemma":0.00002172615,"domain_scores_codex":[0.9978893,0.0004733229,0.000535137,0.0004354948,0.00005389905,0.0006127908],"domain_scores_gemma":[0.9983464,0.0004336647,0.0003288471,0.0007673958,0.0001012234,0.00002239226],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009142415,0.0001748652,0.0001069659,0.00001501459,0.0001912136,0.000006459563,0.0002831997,1.816067e-7,0.9616575,0.02954069,0.006874379,0.001058112],"study_design_scores_gemma":[0.002635637,0.0006162956,0.00199347,0.0000279356,0.00006244932,0.0001684409,0.0004757465,0.000004050961,0.9145231,0.00610531,0.07309843,0.0002891647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9280685,0.06394583,0.00003187911,0.0005852768,0.001721686,0.0003047055,0.0000204893,0.0001357242,0.005185983],"genre_scores_gemma":[0.9843359,0.001320798,0.00002927411,0.0001491272,0.00002108283,0.00002599213,0.00007055452,0.00003275905,0.01401452],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06622405,"threshold_uncertainty_score":0.9993048,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2077563368","doi":"10.1016/j.humimm.2014.10.009","title":"A combination of single nucleotide polymorphisms in the 3′untranslated region of HLA-G is associated with preeclampsia","year":2014,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Sunnybrook Health Science Centre; Women's College Hospital; University of Toronto; Health Sciences Centre; CReATe Fertility Centre","funders":"Canadian Institutes of Health Research","keywords":"Single-nucleotide polymorphism; Human leukocyte antigen; Genetics; Preeclampsia; Biology; Three prime untranslated region; HLA-G; Untranslated region; Pregnancy; Gene; Genotype; Antigen; RNA","retraction":null,"screen_n_in":null,"score":{"opus":0.01905173949855146,"gpt":0.2214390268157956,"spread":0.2023872873172441,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004647168,0.0001500369,0.0004241085,0.000168141,0.00009232038,0.000004032629,0.0003117828,0.0002561375,0.00008331666],"category_scores_gemma":[0.00007079352,0.0001072609,0.00006744608,0.0002555011,0.0005645977,0.00006722689,0.000025792,0.0002158138,0.00001566873],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002480744,"about_ca_system_score_gemma":0.00002130059,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002960605,"about_ca_topic_score_gemma":0.0001036635,"domain_scores_codex":[0.9979935,0.001006122,0.0004477613,0.000265402,0.00004523505,0.0002419626],"domain_scores_gemma":[0.9987391,0.0001788679,0.0004361237,0.0005124585,0.0001290461,0.000004443716],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000178418,0.000662397,0.03218066,0.0000282253,0.0003400346,0.000004413282,0.008217225,0.000001698325,0.9459986,0.01099677,0.000239542,0.001152031],"study_design_scores_gemma":[0.005763086,0.003367646,0.7361385,0.0005778915,0.0001107454,0.0001715408,0.0005794002,0.00000152098,0.2472531,0.004286552,0.001463928,0.0002860787],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920345,0.003186626,0.00007412103,0.0002624282,0.000182783,0.0003761328,0.000005596058,0.00002724033,0.003850598],"genre_scores_gemma":[0.9993367,0.00001170578,0.000006027099,0.00004276674,0.00000772483,0.00001877656,0.00006264773,0.00001496304,0.0004987522],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7039579,"threshold_uncertainty_score":0.4373972,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2028102041","doi":"10.1016/j.humimm.2004.09.008","title":"HLA class II haplotypes in Mexican systemic lupus erythematosus patients","year":2004,"lang":"en","type":"article","venue":"Human Immunology","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hospital for Sick Children","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Haplotype; Genotype; Immunology; Allele; Human leukocyte antigen; Genetics; Biology; Genotyping; Allele frequency; Gene; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.01935966778201024,"gpt":0.2846146674943064,"spread":0.2652549997122961,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003556192,0.0002998293,0.0008087298,0.0006162447,0.0002184688,0.00001865051,0.0003634283,0.0003383294,0.000173683],"category_scores_gemma":[0.0001845304,0.0002635673,0.0001358349,0.0003863602,0.0003239746,0.00009061338,0.0002753161,0.0005662815,0.0005102418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008782032,"about_ca_system_score_gemma":0.000224428,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003270048,"about_ca_topic_score_gemma":0.0001959388,"domain_scores_codex":[0.9973122,0.0001630721,0.0007673131,0.0005303027,0.0004339935,0.0007931386],"domain_scores_gemma":[0.9985621,0.0000744567,0.0001818352,0.0008547712,0.0001999835,0.0001268513],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006554174,0.001474131,0.92694,0.0009995231,0.0003948633,0.0004843626,0.008341775,0.00002317194,0.04279617,0.01635354,0.0009992578,0.0005377485],"study_design_scores_gemma":[0.1974814,0.01889029,0.393211,0.02287482,0.0006007428,0.271912,0.02337411,0.0001242494,0.02513111,0.01881968,0.02320156,0.004379095],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896582,0.002017539,0.00001012302,0.0003462825,0.0006240982,0.001028388,0.000005383274,0.000180071,0.006129954],"genre_scores_gemma":[0.996295,0.00009982139,0.00007460362,0.0001012568,0.00009484097,0.0001516766,0.00004910278,0.00007622467,0.003057493],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5337291,"threshold_uncertainty_score":0.9999816,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2914445827","doi":"10.1016/j.humimm.2019.01.009","title":"Quality control project of NGS HLA genotyping for the 17th International HLA and Immunogenetics Workshop","year":2019,"lang":"en","type":"review","venue":"Human Immunology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institute for Health and Care Research","keywords":"Human leukocyte antigen; Concordance; Genotyping; Typing; Genotype; Immunogenetics; Allele; HLA-C; Genetics; Biology; Gene; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.1123955931581088,"gpt":0.3902640049391085,"spread":0.2778684117809996,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000732311,0.0004601769,0.001596248,0.0003167415,0.0003478458,0.00003920304,0.0007000472,0.0009018161,0.000491239],"category_scores_gemma":[0.0002892341,0.0003332076,0.0006154894,0.0001154649,0.0005326645,0.0000770572,0.0002339192,0.0008887342,0.0001551088],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001199394,"about_ca_system_score_gemma":0.000194236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001196921,"about_ca_topic_score_gemma":0.00001584667,"domain_scores_codex":[0.9971222,0.0006726251,0.001244748,0.0005060253,0.0000500687,0.000404291],"domain_scores_gemma":[0.9959939,0.001808681,0.001210088,0.0007248622,0.0002547913,0.000007698771],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000623477,0.0001834606,0.00001948287,0.002476717,0.007318458,6.239209e-7,0.0005023929,0.000001237578,0.01123283,0.005711307,0.007569616,0.9643604],"study_design_scores_gemma":[0.001701199,0.0002354419,0.0001405792,0.0009688182,0.000830224,0.0001144887,0.0003054079,0.000002539039,0.000152007,0.00003650957,0.9952022,0.00031062],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001071275,0.987605,0.0008101975,0.00006472439,0.008447255,0.001894323,0.00007484233,0.00004515442,0.0009514295],"genre_scores_gemma":[0.001141028,0.9813212,0.00004782179,0.00009351809,0.0001135623,0.0003379468,0.0008109529,0.00006321258,0.01607072],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9876326,"threshold_uncertainty_score":0.999912,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2039710590","doi":"10.1016/j.humimm.2004.10.004","title":"Association of TNF-α polymorphisms in Crohn disease","year":2004,"lang":"en","type":"article","venue":"Human Immunology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Memorial University of Newfoundland","funders":"Canadian Institutes of Health Research; Arthritis Society","keywords":"Single-nucleotide polymorphism; Genotype; Allele; Biology; Tumor necrosis factor alpha; Genetics; Genetic association; Allele frequency; Population; Minor allele frequency; Gene; Molecular biology; Immunology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.006139592365319723,"gpt":0.2291567596525569,"spread":0.2230171672872372,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001093549,0.00009673847,0.0001095056,0.00007538417,0.00004102142,0.000005017622,0.0001498934,0.0001372603,0.00007038146],"category_scores_gemma":[0.00009500505,0.0001103292,0.00006890852,0.00004829283,0.00008184541,0.000003560675,0.00007441866,0.00007532896,0.0000292001],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007667335,"about_ca_system_score_gemma":0.0001096196,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004432994,"about_ca_topic_score_gemma":0.0001634985,"domain_scores_codex":[0.99924,0.00006532211,0.000220409,0.0001899926,0.00007333967,0.000210903],"domain_scores_gemma":[0.9994876,0.000004186364,0.0001250714,0.0002916863,0.00005023865,0.00004122689],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004816561,0.0002987174,0.2705004,0.00002019472,0.0001198282,0.0002392021,0.0001236294,0.0001907762,0.7220957,0.005317931,0.0003333269,0.0002786671],"study_design_scores_gemma":[0.00129081,0.00003968663,0.9820508,0.00001131177,0.00001445545,0.000001331141,0.0000137741,6.216942e-7,0.01462085,0.001222108,0.0006236869,0.0001105235],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985393,0.0003934433,0.00002492488,0.0001224863,0.0001001307,0.0001213052,0.00001493568,0.00001013432,0.0006733476],"genre_scores_gemma":[0.998953,0.00002841893,0.00003939304,0.0001103318,0.00005597799,0.00002177051,0.00008898482,0.00001441641,0.0006877406],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7115504,"threshold_uncertainty_score":0.4499095,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1975861248","doi":"10.1016/j.humimm.2012.07.332","title":"Endothelial molecules decipher the mechanisms and functional pathways in antibody-mediated rejection","year":2012,"lang":"en","type":"review","venue":"Human Immunology","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Endothelial activation; Antibody; Endothelium; Endothelial stem cell; Immunology; Basement membrane; Inflammation; Biology; Peritubular capillaries; Endothelial dysfunction; Transplantation; Medicine; Pathology; In vitro; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.06895014120669905,"gpt":0.3297029258727754,"spread":0.2607527846660764,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001353141,0.0002726356,0.0007763201,0.0002101437,0.0001164001,0.00001330888,0.00006013634,0.0002998776,0.0002833951],"category_scores_gemma":[0.00001338747,0.0001625084,0.0001782856,0.0001291135,0.000100356,0.00003828214,0.00002721267,0.0003599417,0.0001472793],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008215031,"about_ca_system_score_gemma":0.00006954341,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004698079,"about_ca_topic_score_gemma":0.00002081813,"domain_scores_codex":[0.9987963,0.0001809135,0.0003990639,0.000251056,0.0001245535,0.0002480959],"domain_scores_gemma":[0.9993882,0.0001620624,0.0001669452,0.0002180098,0.00002615226,0.00003861366],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004311902,0.001009787,0.0008771507,0.01042747,0.003578498,0.0005509859,0.0006635899,7.841769e-7,0.009081025,0.05881445,0.00002560162,0.9145395],"study_design_scores_gemma":[0.009139483,0.001198422,0.03598411,0.01543481,0.005854679,0.004596576,0.0001852924,0.000004092176,0.0001533288,0.001841831,0.9246736,0.0009337825],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004680023,0.9970923,0.0003015723,0.00001564532,0.0003992612,0.0007920594,0.0000436095,0.00003637534,0.0008511642],"genre_scores_gemma":[0.001721735,0.9962766,0.0001398234,0.00005905455,0.0001007331,0.0001995556,0.0009521876,0.00003894988,0.0005113889],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.924648,"threshold_uncertainty_score":0.6626902,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2108336316","doi":"10.1016/j.humimm.2011.12.002","title":"Human leukocyte antigen (HLA) and pharmacogenetics: screening for HLA-B*57:01 among human immunodeficiency virus–positive patients from southern Alberta","year":2011,"lang":"en","type":"article","venue":"Human Immunology","topic":"Drug-Induced Adverse Reactions","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Alberta Health Services; Alberta Hip and Knee Clinic; University of Calgary; Calgary Laboratory Services","funders":"Ministry of Economy, Trade and Industry","keywords":"Abacavir; Genotyping; Human leukocyte antigen; HLA-B; Immunology; Medicine; HLA-B Antigens; Odds ratio; Pharmacogenetics; Virology; Genotype; Internal medicine; Antigen; Biology; Viral load; Human immunodeficiency virus (HIV); Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.04751553858669348,"gpt":0.2946621957993025,"spread":0.247146657212609,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001598663,0.000465468,0.0006562332,0.0003529476,0.001085056,0.0000401761,0.0003250586,0.0003217183,0.0003183932],"category_scores_gemma":[0.00004931917,0.00048285,0.0002259678,0.0001427406,0.0006616273,0.0002086681,0.0003160611,0.0005250962,0.000114217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001428849,"about_ca_system_score_gemma":0.00004677421,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01442297,"about_ca_topic_score_gemma":0.001151454,"domain_scores_codex":[0.9974653,0.0001273303,0.000665403,0.0007771345,0.0002186034,0.0007461953],"domain_scores_gemma":[0.9984563,0.0001000237,0.0003996509,0.0006648471,0.0002279855,0.0001511704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001730214,0.001028168,0.06474495,0.000032009,0.001400384,0.00003006427,0.01308135,0.000001891854,0.9050562,0.0008071691,0.00004954983,0.01359525],"study_design_scores_gemma":[0.007020932,0.0005857428,0.9253732,0.0001854297,0.0006079616,0.00001978206,0.002300325,0.00003285125,0.06098946,0.0006206055,0.001665258,0.0005984813],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9775639,0.00050791,0.000222482,0.00001680691,0.0002563644,0.001078478,0.0001345322,0.0001239186,0.0200956],"genre_scores_gemma":[0.9962217,0.00004003319,0.0007232908,0.000124826,0.000145103,0.0001086219,0.0005883814,0.0001261204,0.001921964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8606282,"threshold_uncertainty_score":0.9997623,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1996078869","doi":"10.1016/j.humimm.2007.02.002","title":"DC-SIGN and DC-SIGNR genetic diversity among different ethnic populations: Potential implications for pathogen recognition and disease susceptibility","year":2007,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Johns Hopkins University; Styrelsen för Internationellt Utvecklingssamarbete; United States Agency for International Development; McGill University; Canadian Institutes of Health Research; Rockefeller Foundation","keywords":"Biology; DC-SIGN; Genetic diversity; Allele; Genotype; Genetics; Genetic variation; Immune system; Single-nucleotide polymorphism; Population; Evolutionary biology; Gene; Dendritic cell; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.06098054391632753,"gpt":0.2903935097345687,"spread":0.2294129658182411,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0004214902,0.0002761763,0.0003436477,0.0002256024,0.001492611,0.0000254411,0.0002062399,0.0003519181,0.0002175515],"category_scores_gemma":[0.0001577039,0.0002717538,0.0001333426,0.00009399399,0.0008873472,0.0001412358,0.0002988704,0.0002741434,0.00002356871],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006828825,"about_ca_system_score_gemma":0.00003247441,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002089805,"about_ca_topic_score_gemma":0.0002627666,"domain_scores_codex":[0.9980731,0.0003786914,0.000474532,0.0005258754,0.00002980938,0.0005179909],"domain_scores_gemma":[0.9989001,0.0002569701,0.0002052028,0.0004519857,0.0001266843,0.00005909932],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001516134,0.0002740852,0.0745955,0.00003254618,0.000250086,0.000002929076,0.0007127927,6.479021e-7,0.8829589,0.000838378,0.0001070293,0.03871092],"study_design_scores_gemma":[0.002156691,0.0004270455,0.976316,0.00002290999,0.0001850873,0.00004202147,0.0002471547,0.000001146669,0.003653042,0.01631569,0.0003326592,0.000300524],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9754651,0.01755598,0.005172511,0.0001810399,0.0003560142,0.0009247723,0.0002222705,0.00009841999,0.00002393595],"genre_scores_gemma":[0.9976671,0.0006604469,0.0001508988,0.0001088749,0.00003510923,0.00008630446,0.0007842333,0.00002593926,0.0004810499],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9017205,"threshold_uncertainty_score":0.9999735,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3133110531","doi":"10.1016/j.humimm.2021.01.014","title":"The immune potential of decidua-resident CD16+CD56+ NK cells in human pregnancy","year":2021,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Sinai Health System; Lunenfeld-Tanenbaum Research Institute","funders":"Canadian Institutes of Health Research","keywords":"CD16; Decidua; Biology; Immune system; Cytokine; Immunology; Natural killer cell; Interleukin 12; Population; Interleukin 21; Cell biology; CD3; T cell; Placenta; Cytotoxic T cell; Pregnancy; Medicine; Fetus; CD8; In vitro; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01236561095139111,"gpt":0.2477249485266126,"spread":0.2353593375752215,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004720291,0.0003111843,0.0006832405,0.0001745793,0.0006367572,0.00002895058,0.0007114323,0.0004255022,0.001174715],"category_scores_gemma":[0.00009706658,0.0002544447,0.000261754,0.000263248,0.0008240303,0.0001052202,0.0004382908,0.000585268,0.0002984014],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006883108,"about_ca_system_score_gemma":0.0001278816,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004071571,"about_ca_topic_score_gemma":0.000394414,"domain_scores_codex":[0.9962739,0.001188191,0.001098854,0.0006656846,0.00007329659,0.0007000244],"domain_scores_gemma":[0.9977733,0.0001674559,0.0004399628,0.001349636,0.0002532152,0.00001636352],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004933063,0.0002012419,0.003026217,0.00005230843,0.0003582563,0.0000830951,0.0007989441,0.000008628364,0.9662341,0.0274358,0.0003884852,0.00136356],"study_design_scores_gemma":[0.002242221,0.0002844692,0.1510613,0.0004662792,0.00005353073,0.0002158982,0.001007072,1.331083e-7,0.835059,0.004706576,0.004610983,0.000292442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7382243,0.2533918,0.00006622602,0.0001776558,0.002492851,0.0005141417,0.0000187584,0.00005694242,0.005057381],"genre_scores_gemma":[0.9815322,0.0008573524,0.00002223553,0.00001304871,0.00005246583,0.00008544324,0.00009121274,0.00003494967,0.01731109],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2525344,"threshold_uncertainty_score":0.9999908,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2043318634","doi":"10.1016/j.humimm.2010.05.007","title":"Variant in CD209 promoter is associated with severity of liver disease in chronic hepatitis C virus infection","year":2010,"lang":"en","type":"article","venue":"Human Immunology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Trinity College","funders":"","keywords":"Immunology; Hepatitis C virus; Single-nucleotide polymorphism; Biology; SNP; Virology; Liver disease; Virus; Medicine; Genotype; Internal medicine; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02021369857794863,"gpt":0.2976297444848752,"spread":0.2774160459069265,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002997042,0.0001318411,0.0003456426,0.0003727543,0.00004437311,0.000008397526,0.00009237545,0.0002084481,0.001675981],"category_scores_gemma":[0.0002616883,0.0001216638,0.00004285641,0.0003241724,0.0002805058,0.0001074866,0.00007739573,0.0008118059,0.00005417036],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004456205,"about_ca_system_score_gemma":0.0004057137,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.07257649,"about_ca_topic_score_gemma":0.4060556,"domain_scores_codex":[0.998683,0.0001906896,0.0003088051,0.0002661932,0.0001975521,0.0003537303],"domain_scores_gemma":[0.999302,0.00004807158,0.000094626,0.0003650548,0.000121275,0.00006902804],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002041997,0.0005195497,0.9348021,0.00006518477,0.00007914072,0.0008054253,0.0006356263,0.00000135284,0.06015154,0.0001321646,0.00004297222,0.002560739],"study_design_scores_gemma":[0.002113803,0.00071316,0.9930444,0.0001715207,0.00002129571,0.00001751149,0.000001099032,0.0004479889,0.002785175,0.0001403004,0.0004306537,0.0001131262],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985972,0.00012054,0.00000945105,0.00011381,0.00005867308,0.0005426269,0.00002338627,0.00003017166,0.0005041416],"genre_scores_gemma":[0.999261,0.000257205,0.0000219266,0.00004888923,0.00003155776,0.00005301319,0.00005100554,0.00002356943,0.0002518102],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3334791,"threshold_uncertainty_score":0.9992366,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2886273764","doi":"10.1016/j.humimm.2018.08.001","title":"(F)Utility of the physical crossmatch for living donor evaluations in the age of the virtual crossmatch","year":2018,"lang":"en","type":"article","venue":"Human Immunology","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Donor specific antibodies; Human leukocyte antigen; Internal medicine; Vetting; Transplantation; Immunology; Kidney transplantation; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.05472294702021089,"gpt":0.3820915618819734,"spread":0.3273686148617625,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002663874,0.00008607229,0.0002186278,0.00002545709,0.0002305643,0.000008137624,0.0002527162,0.00005357754,0.00006388305],"category_scores_gemma":[0.0001008075,0.00003922382,0.0001726939,0.0001399617,0.0007602563,0.00002693269,0.00004303218,0.0001253538,0.000004486496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001585226,"about_ca_system_score_gemma":0.00006286307,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001865174,"about_ca_topic_score_gemma":0.0003992949,"domain_scores_codex":[0.9991443,0.0001730561,0.0002678062,0.0001216832,0.0001499458,0.0001432778],"domain_scores_gemma":[0.9988915,0.0004089873,0.0001223318,0.0004629044,0.0001070333,0.000007205126],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005730096,0.002288932,0.7279199,0.0003140336,0.0006744384,0.000003417412,0.06063824,0.00001016027,0.178857,0.02608371,0.000174912,0.002462276],"study_design_scores_gemma":[0.001281552,0.0003242605,0.9860868,0.0001383916,0.0001135028,0.000009476716,0.000519487,0.00004698613,0.009992654,0.001306686,0.0001471073,0.00003302964],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977562,0.00003683655,0.00007063143,0.000411054,0.0001448994,0.0006279551,0.00002939635,0.000005689971,0.000917312],"genre_scores_gemma":[0.999147,0.000004030714,0.00003401754,0.0001319312,0.00004593865,0.00004687157,0.000009662968,0.000007106905,0.0005734315],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.258167,"threshold_uncertainty_score":0.2801196,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2032620235","doi":"10.1016/j.humimm.2011.11.002","title":"Strong association of phenylalanine and tryptophan metabolites with activated cytomegalovirus infection in kidney transplant recipients","year":2011,"lang":"en","type":"article","venue":"Human Immunology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Kynurenine; Quinolinic acid; Tryptophan; Metabolite; Kynurenine pathway; Phenylalanine; Immunology; Biology; Kidney transplantation; Transplantation; Cytomegalovirus; Amino acid; Medicine; Virus; Herpesviridae; Viral disease; Internal medicine; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.03138236400462878,"gpt":0.2848165895116455,"spread":0.2534342255070167,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002688761,0.0001462891,0.0004309691,0.0004529408,0.00006355822,0.000008201159,0.00005843772,0.0001806739,0.0004761728],"category_scores_gemma":[0.0000618019,0.0001217992,0.00004185616,0.0003004468,0.0001164809,0.0001325365,0.00002664873,0.0003579103,0.00001039025],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001518624,"about_ca_system_score_gemma":0.00008084231,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003190689,"about_ca_topic_score_gemma":0.0007395088,"domain_scores_codex":[0.9988347,0.0001130664,0.0003125919,0.0002364612,0.0001829388,0.0003202894],"domain_scores_gemma":[0.9994268,0.00003958469,0.0001528823,0.0001842192,0.0001115123,0.00008499062],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001358128,0.0002951845,0.6305848,0.00004304096,0.0002485187,0.00001561188,0.001465676,1.420494e-7,0.3644841,0.0005000115,0.00001650712,0.0009882574],"study_design_scores_gemma":[0.003971178,0.0008187872,0.8729497,0.0001293789,0.00006878859,0.00002339156,0.00004313179,0.000006122896,0.121195,0.00006698564,0.0006263359,0.0001012052],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960985,0.0002090351,0.00001434556,0.00003681944,0.00004779122,0.0002985342,0.00001979796,0.00003321026,0.003241986],"genre_scores_gemma":[0.9988643,0.0003940052,0.0001042588,0.00003229382,0.00002690055,0.0000277965,0.00005285022,0.00002118452,0.000476426],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2432891,"threshold_uncertainty_score":0.5213758,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2022676280","doi":"10.1016/s0198-8859(01)00339-1","title":"Two-step high resolution sequence-based HLA-DRB typing of exon 2 DNA with taxonomy-based sequence analysis allele assignment","year":2001,"lang":"en","type":"article","venue":"Human Immunology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Centre for Disease Control; University of British Columbia; University of Manitoba","funders":"","keywords":"Biology; Genetics; Polymerase chain reaction; Allele; Primer (cosmetics); Typing; Sequence analysis; Exon; DNA sequencing; Molecular biology; DNA; Gene; Chemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.04110227879421597,"gpt":0.2508683638432231,"spread":0.2097660850490071,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004795382,0.0005622784,0.001132755,0.000905371,0.000584571,0.00002485068,0.0007731446,0.0006614422,0.003235228],"category_scores_gemma":[0.00003850823,0.0005079985,0.000329399,0.000948392,0.001765381,0.0001481674,0.000145296,0.000735052,0.0003286055],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003623973,"about_ca_system_score_gemma":0.000323268,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0031255,"about_ca_topic_score_gemma":0.001118889,"domain_scores_codex":[0.9960626,0.0008686715,0.0009544765,0.0009327916,0.000100486,0.00108097],"domain_scores_gemma":[0.9974177,0.0002384886,0.0007886167,0.001241948,0.0002691348,0.00004406579],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001138717,0.0005145689,0.005719875,0.00002533956,0.002063555,0.00005895811,0.00007745156,0.002372821,0.9831765,0.003186645,0.0002040835,0.001461509],"study_design_scores_gemma":[0.01626993,0.004814385,0.01266374,0.0001972988,0.002222575,0.0002676493,0.000704218,0.0007558867,0.9020562,0.0003354313,0.05800309,0.001709662],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9788928,0.002442758,0.01496164,0.0003674797,0.0003857208,0.0007039456,0.00006119208,0.0002519643,0.001932484],"genre_scores_gemma":[0.9948665,0.00007894143,0.001763052,0.0002578055,0.00003499447,0.0002381427,0.001222953,0.00004710513,0.00149053],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08112034,"threshold_uncertainty_score":0.9997371,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2012829914","doi":"10.1016/j.humimm.2009.11.007","title":"Blood soluble human leukocyte antigen G levels are associated with human immunodeficiency virus type 1 infection in Beninese commercial sex workers","year":2009,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal; Université Laval; Centre Hospitalier de l’Université de Montréal; Université de Sherbrooke; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Human leukocyte antigen; Genotype; HLA-G; Immunology; Virology; Allele; Immune system; Untranslated region; Biology; Population; Virus; Antigen; Human immunodeficiency virus (HIV); Medicine; Gene; RNA; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.03560832171292425,"gpt":0.2797535345660773,"spread":0.244145212853153,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006368351,0.0005215954,0.0009390627,0.0005017885,0.001223265,0.00005078027,0.0004985451,0.0007433719,0.0006382762],"category_scores_gemma":[0.00008645832,0.00048715,0.0001465307,0.000646813,0.0005555702,0.0002699208,0.00012992,0.0009616463,0.0002093443],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001948599,"about_ca_system_score_gemma":0.00009210434,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002417421,"about_ca_topic_score_gemma":0.002745703,"domain_scores_codex":[0.9963534,0.0008876343,0.0008176657,0.0008790383,0.0000896269,0.0009725692],"domain_scores_gemma":[0.9981731,0.00006269506,0.0006040739,0.0008915717,0.0002419484,0.00002659106],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001017411,0.0007549401,0.4290184,0.00001013069,0.0004029122,0.00003721126,0.001144591,0.00001436215,0.5671559,0.0007341923,0.0003087501,0.0003168978],"study_design_scores_gemma":[0.003792186,0.001866784,0.9488238,0.0002832629,0.00008551883,0.0001062872,0.0001788267,7.836422e-8,0.04316872,0.0005573159,0.0005848173,0.0005524341],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985248,0.007742908,0.000009564401,0.00007008871,0.0007763966,0.0006230555,0.00001128948,0.0002616358,0.005257094],"genre_scores_gemma":[0.9937361,0.00005750422,0.000006561214,0.00006824832,0.00006980632,0.00003803488,0.0003237454,0.00004979281,0.005650243],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5239872,"threshold_uncertainty_score":0.999758,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1971126571","doi":"10.1016/j.humimm.2012.09.009","title":"Increased serum levels of quinolinic acid indicate enhanced severity of hepatic dysfunction in patients with liver cirrhosis","year":2012,"lang":"en","type":"article","venue":"Human Immunology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Neopterin; Cirrhosis; Hepatic encephalopathy; Gastroenterology; Quinolinic acid; Internal medicine; Liver disease; Medicine; Kynurenine; Model for End-Stage Liver Disease; Tryptophan; Biology; Liver transplantation","retraction":null,"screen_n_in":null,"score":{"opus":0.01628592433215841,"gpt":0.2422576811616635,"spread":0.2259717568295051,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009975893,0.0001016978,0.0002944606,0.0002000716,0.00002672201,0.000001105291,0.00005349843,0.00009888004,0.0003564417],"category_scores_gemma":[0.0000099989,0.00008890052,0.00004199448,0.0001434574,0.0001003019,0.0001450462,0.00001571985,0.0001170493,0.00001705408],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004458537,"about_ca_system_score_gemma":0.00004585019,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002993002,"about_ca_topic_score_gemma":0.00004589396,"domain_scores_codex":[0.9991627,0.00009754195,0.0002965317,0.0001235116,0.0001298518,0.0001899047],"domain_scores_gemma":[0.9994419,0.00003613525,0.0001967064,0.0001945574,0.00008913707,0.00004153355],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001453579,0.0006891688,0.9553443,0.0002434947,0.0003327573,0.000001557208,0.001530381,1.732238e-7,0.03894981,0.00004791618,0.000001112094,0.001405751],"study_design_scores_gemma":[0.004348138,0.0008739319,0.860414,0.000144681,0.0003215068,0.000001406684,0.00005029457,0.000001406305,0.1337518,0.00002286703,8.533417e-7,0.00006910067],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991548,0.0002135229,0.00006636624,0.00000758027,0.00005642707,0.0002949625,0.00004102951,0.00001532314,0.0001499707],"genre_scores_gemma":[0.9997204,0.00003741575,0.0000532171,0.00005090742,0.00001387635,0.00001438886,0.00008868246,0.0000110968,0.000010026],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09493024,"threshold_uncertainty_score":0.3902787,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3010921037","doi":"10.1016/j.humimm.2020.02.011","title":"New genetic predictors for abacavir tolerance in HLA-B*57:01 positive individuals","year":2020,"lang":"en","type":"article","venue":"Human Immunology","topic":"Drug-Induced Adverse Reactions","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto; AIDS Vancouver","funders":"National Institute of General Medical Sciences; National Institutes of Health; GlaxoSmithKline; National Human Genome Research Institute; National Institute of Allergy and Infectious Diseases; Australian Centre for HIV and Hepatitis Virology Research; National Health and Medical Research Council","keywords":"Abacavir; Immune system; Immunology; Human leukocyte antigen; Biology; Antigen; Virus","retraction":null,"screen_n_in":null,"score":{"opus":0.02847420164922487,"gpt":0.2923206845309939,"spread":0.263846482881769,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000582068,0.00018796,0.0004091282,0.0001661591,0.00008998377,0.00001154302,0.0001533731,0.0001974221,0.00006916149],"category_scores_gemma":[0.000114715,0.0001979415,0.0001079474,0.0002299028,0.0000957367,0.00008467307,0.0000882548,0.0003886302,0.0001350082],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001337043,"about_ca_system_score_gemma":0.000179195,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000145035,"about_ca_topic_score_gemma":0.0000399077,"domain_scores_codex":[0.9987113,0.00005032479,0.0003572902,0.0003784072,0.0001169127,0.0003856941],"domain_scores_gemma":[0.9993507,0.00009649451,0.0001080208,0.0002561464,0.00004850574,0.0001401165],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000397839,0.0008624571,0.04627749,0.0002384891,0.001619496,0.0003441776,0.0196529,0.0002803208,0.7303178,0.007574357,0.004751494,0.1876831],"study_design_scores_gemma":[0.004783497,0.0004603405,0.9565166,0.0001077439,0.0001346374,0.00008992107,0.0004871589,0.00004854135,0.005705643,0.000513277,0.03092589,0.0002268153],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9800947,0.0008088329,0.0007400792,0.004054746,0.0003409343,0.001160496,0.00004714702,0.000153667,0.01259938],"genre_scores_gemma":[0.9957817,0.00004898766,0.001819216,0.001007625,0.0003444537,0.00008116617,0.00008767999,0.00004324174,0.0007859375],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.910239,"threshold_uncertainty_score":0.8071822,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2029950092","doi":"10.1016/j.humimm.2004.12.002","title":"Synergistic inhibition of tumor necrosis factor-related apoptosis-inducing ligand-induced apoptosis in human pancreatic β cells by Bcl-2 and X-linked inhibitor of apoptosis","year":2005,"lang":"en","type":"article","venue":"Human Immunology","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa; University of British Columbia","funders":"Canadian Diabetes Association","keywords":"XIAP; Apoptosis; Transfection; Inhibitor of apoptosis; Cytotoxicity; Tumor necrosis factor alpha; Programmed cell death; Cell culture; Cell biology; Biology; Cancer research; Molecular biology; Chemistry; Caspase; Immunology; In vitro; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.009874587905972981,"gpt":0.2321216814276498,"spread":0.2222470935216768,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002084999,0.000322973,0.0005812356,0.0002690211,0.0001541048,0.00001950387,0.0001509512,0.0004775082,0.00004983189],"category_scores_gemma":[0.00003776388,0.0003313899,0.000138276,0.0002015886,0.0002030388,0.00001925906,0.0001428661,0.0002130534,0.000003013297],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005972502,"about_ca_system_score_gemma":0.00003550862,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003454065,"about_ca_topic_score_gemma":0.00004893154,"domain_scores_codex":[0.9978605,0.0001506978,0.0009152404,0.0005417553,0.0001529887,0.0003788062],"domain_scores_gemma":[0.9988682,0.00003342563,0.0005049935,0.000419454,0.0001105186,0.0000633992],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005719364,0.0002476684,0.0002705908,0.000086726,0.0001129292,2.666726e-7,0.0003354994,0.0000279244,0.9971802,0.0003429984,0.00006397913,0.001274057],"study_design_scores_gemma":[0.00177448,0.0006991735,0.002330991,0.0001630975,0.00007702485,0.000002448145,0.0001625034,0.00005087885,0.9941674,0.0001644593,0.0000910181,0.0003165059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985692,0.0005393903,0.00007724228,0.00004798287,0.0001418835,0.0003893111,0.00002899056,0.00002209648,0.0001839081],"genre_scores_gemma":[0.998915,0.0002737165,0.0001663907,0.00002775389,0.00007343121,0.0000408407,0.0002602758,0.00004805297,0.0001945093],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003012748,"threshold_uncertainty_score":0.9999138,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2062920669","doi":"10.1016/j.humimm.2014.09.018","title":"Foxp3 methylation status in children with primary immune thrombocytopenia","year":2014,"lang":"en","type":"article","venue":"Human Immunology","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Hospital for Sick Children; National Natural Science Foundation of China","keywords":"Immune thrombocytopenia; FOXP3; CpG site; Methylation; DNA methylation; Medicine; Pathogenesis; Immunology; Subgroup analysis; Promoter; Immune system; Internal medicine; Gastroenterology; Antibody; DNA; Biology; Gene; Gene expression; Genetics; Confidence interval","retraction":null,"screen_n_in":null,"score":{"opus":0.0102600062072574,"gpt":0.2548920519691082,"spread":0.2446320457618508,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009198725,0.0001434089,0.0004805116,0.0001485034,0.00007621531,0.000009073389,0.00006487015,0.0001012461,0.0001565643],"category_scores_gemma":[0.00001285614,0.0001123284,0.00003679466,0.0001161537,0.000105433,0.00007540066,0.00003713158,0.0001861238,0.00007867842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009895814,"about_ca_system_score_gemma":0.00004157351,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005593383,"about_ca_topic_score_gemma":0.0001222675,"domain_scores_codex":[0.9991009,0.00006606619,0.0002060102,0.0002266499,0.00008915192,0.000311187],"domain_scores_gemma":[0.9995438,0.00002204485,0.00007741738,0.0002973789,0.0000270424,0.00003228232],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005000747,0.0007518586,0.8997939,0.00002045334,0.000763384,0.00006401983,0.0004904771,0.000006029575,0.06845654,0.002551302,0.0000596616,0.02654236],"study_design_scores_gemma":[0.006489999,0.0009604414,0.9892475,0.0000272258,0.0000671264,0.0001412297,0.000022669,0.000005403523,0.001636589,0.0006581257,0.0006309821,0.0001127134],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9898224,0.00115965,0.00004632077,0.0001036975,0.0000301247,0.0003771009,0.000002220017,0.00004819938,0.008410309],"genre_scores_gemma":[0.9986195,0.00009754338,0.0003929442,0.0001364815,0.00001716138,0.00002722356,0.0003277082,0.00002275557,0.0003586916],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08945366,"threshold_uncertainty_score":0.4580619,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2060582541","doi":"10.1016/s0198-8859(01)00337-8","title":"HLA-DRB1∗04 alleles in psoriatic arthritis: comparison with rheumatoid arthritis and healthy controls","year":2001,"lang":"en","type":"article","venue":"Human Immunology","topic":"Rheumatoid Arthritis Research and Therapies","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto Western Hospital; University Health Network; Memorial University of Newfoundland; Arthritis Society; University of Toronto","funders":"","keywords":"Rheumatoid arthritis; Psoriatic arthritis; Medicine; Allele; Human leukocyte antigen; Immunology; Psoriasis; Arthritis; Antigen; Internal medicine; Biology; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01734824003862206,"gpt":0.2883129414233215,"spread":0.2709647013846994,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003302254,0.0002858341,0.001026248,0.0003595243,0.0002755684,0.00007033598,0.0001385796,0.0001693993,0.0004464671],"category_scores_gemma":[0.0000931589,0.0002590458,0.00005985951,0.0002125083,0.0006597877,0.0001720985,0.00006483463,0.0005947743,0.00008606177],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006960046,"about_ca_system_score_gemma":0.0001302724,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006893583,"about_ca_topic_score_gemma":0.005648513,"domain_scores_codex":[0.9975315,0.00024115,0.0006762937,0.0004511615,0.0002736178,0.0008262199],"domain_scores_gemma":[0.9990031,0.0001499384,0.0001481054,0.0004019362,0.0001023778,0.0001945522],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.00783212,0.001764946,0.2945084,0.0001081649,0.000830865,0.001736993,0.004759461,0.00001095205,0.008666084,0.02089642,0.001579604,0.657306],"study_design_scores_gemma":[0.1025727,0.01822585,0.6976138,0.005233647,0.0000104885,0.009560592,0.006032996,0.0003665024,0.0006702564,0.005702438,0.1527503,0.001260399],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8048792,0.1915376,0.00004681553,0.001693082,0.00006942526,0.0006296701,0.000004792072,0.000099976,0.001039444],"genre_scores_gemma":[0.7451571,0.2540855,0.0001991317,0.0002475768,0.00003642933,0.0001304668,0.00003744037,0.00003430111,0.00007210296],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6560456,"threshold_uncertainty_score":0.9999862,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2049730817","doi":"10.1016/j.humimm.2009.12.007","title":"A census of predicted mutational epitopes suitable for immunologic cancer control","year":2010,"lang":"en","type":"article","venue":"Human Immunology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University; BC Cancer Agency","funders":"Canadian Institutes of Health Research; Genome British Columbia; Genome Canada","keywords":"Epitope; Human leukocyte antigen; Biology; KRAS; Antigen; Immunology; Immune system; Gene; Genetics; Mutation","retraction":null,"screen_n_in":null,"score":{"opus":0.01294606091896971,"gpt":0.266055072953324,"spread":0.2531090120343543,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001653728,0.0001495258,0.0002386216,0.00006051946,0.0001408853,0.00001330607,0.0002817599,0.0002718304,0.0000968302],"category_scores_gemma":[0.0001192407,0.0001333464,0.0001127855,0.00005161811,0.0001703168,0.000006914821,0.00007629843,0.0001634599,0.000002065657],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007483947,"about_ca_system_score_gemma":0.00007494286,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006571755,"about_ca_topic_score_gemma":0.00005599849,"domain_scores_codex":[0.9990788,0.00002786908,0.000364436,0.0001866534,0.00005662747,0.0002855923],"domain_scores_gemma":[0.9991729,0.00003330816,0.0002134295,0.0003265646,0.0002323058,0.00002146612],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001884818,0.00008705064,0.001407443,0.00002873586,0.0002900652,2.455272e-7,0.00007293532,0.00004031327,0.9925771,0.003410441,0.000651264,0.001245976],"study_design_scores_gemma":[0.01366432,0.003036815,0.173959,0.00003829642,0.0001985906,0.0001184831,0.0007471143,0.001162429,0.6966472,0.00274118,0.106804,0.000882572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964594,0.001445207,0.000516079,0.000107545,0.0003559269,0.0003916894,0.0003113044,0.00001659471,0.0003962335],"genre_scores_gemma":[0.9976931,0.00008039212,0.0007936495,0.00007445415,0.0001295149,0.0002279776,0.0005127381,0.00001916395,0.0004689987],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2959298,"threshold_uncertainty_score":0.5437707,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4210295099","doi":"10.1016/j.humimm.2022.01.002","title":"Genome Canada precision medicine strategy for structured national implementation of epitope matching in renal transplantation","year":2022,"lang":"en","type":"article","venue":"Human Immunology","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Alberta; Dalhousie University; McGill University; University of British Columbia","funders":"","keywords":"Epitope; Immunogenicity; Human leukocyte antigen; Transplantation; Antigenicity; Computational biology; Medicine; Matching (statistics); Immunology; Computer science; Antibody; Antigen; Biology; Internal medicine; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.03392475728467877,"gpt":0.3445507075227962,"spread":0.3106259502381175,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001666183,0.00009787722,0.0002422269,0.000200198,0.0001336368,0.000002339043,0.00006948703,0.00002896189,0.0008326576],"category_scores_gemma":[0.000004232501,0.00008897598,0.00003743577,0.0001189336,0.00002870667,0.00004326511,0.000008318448,0.0001121068,2.431844e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000301621,"about_ca_system_score_gemma":0.0003093239,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.07738622,"about_ca_topic_score_gemma":0.1381934,"domain_scores_codex":[0.9988774,0.00006905037,0.0004461978,0.0001688107,0.0002929368,0.0001456092],"domain_scores_gemma":[0.9995824,0.00008919099,0.0001546178,0.00007637993,0.00007526259,0.00002218717],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.003146431,0.000234844,0.03205322,0.0006055214,0.0007363668,0.0001601016,0.006560069,0.007473523,0.9219838,0.01684328,0.00008203276,0.01012077],"study_design_scores_gemma":[0.01002855,0.001088553,0.9783628,0.00005118042,0.00009274291,0.0001449306,0.001672057,0.00002007111,0.004719524,0.003384644,0.0003382013,0.00009672539],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979362,0.0002216623,0.0003675173,0.0002651698,0.0001216321,0.0005724462,0.0002792464,0.000008042884,0.000228108],"genre_scores_gemma":[0.9967259,0.00006093616,0.0002646603,0.00008704016,0.00002900522,0.0001028251,0.002620995,0.00001121984,0.00009742281],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9463096,"threshold_uncertainty_score":0.9287575,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2042266588","doi":"10.1016/j.humimm.2010.10.019","title":"Association of TBX21 promoter polymorphisms with type 1 autoimmune hepatitis in a Chinese population","year":2010,"lang":"en","type":"article","venue":"Human Immunology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Southwest Hospital; Alberta Innovates - Health Solutions; National Science Foundation","keywords":"Autoimmune hepatitis; Allele; Biology; Genotype; Odds ratio; Immunology; Cytotoxic T cell; CD8; Population; Single-nucleotide polymorphism; Promoter; Genetics; Molecular biology; Gene; Internal medicine; Hepatitis; Immune system; Medicine; Gene expression; In vitro","retraction":null,"screen_n_in":null,"score":{"opus":0.006673692189712055,"gpt":0.2508300349995269,"spread":0.2441563428098149,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001207576,0.00009903399,0.0002643106,0.0001441579,0.00005090049,0.000005951484,0.00007214514,0.0001389668,0.0007384614],"category_scores_gemma":[0.00008749634,0.0000780751,0.00004104372,0.0001969675,0.00005518327,0.00008773461,0.00003566612,0.000314583,0.00001763133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007616082,"about_ca_system_score_gemma":0.00004754032,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005269846,"about_ca_topic_score_gemma":0.001432405,"domain_scores_codex":[0.999315,0.00005645396,0.0002360194,0.0001210001,0.0001102056,0.0001613475],"domain_scores_gemma":[0.9993727,0.0000232449,0.0001698586,0.0002970104,0.0001159776,0.00002121685],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001756613,0.0002297603,0.8429804,0.00001963136,0.00008750226,0.000006396291,0.0002865055,3.06878e-7,0.155513,0.0002494311,0.00002275583,0.0004287096],"study_design_scores_gemma":[0.001634835,0.000602462,0.9966493,0.00004624309,0.00005217636,0.00001819616,0.00001471782,0.00002781345,0.0005342333,0.0002460891,0.00009562982,0.00007833571],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985914,0.0001506322,0.000002196543,0.0002478855,0.0001824878,0.0002443941,0.000004192534,0.0000307038,0.0005461508],"genre_scores_gemma":[0.9981506,0.00002247253,0.0001245675,0.0000380147,0.00003214219,0.00001054793,0.0001622155,0.00001492252,0.001444444],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1549787,"threshold_uncertainty_score":0.8085634,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2943899162","doi":"10.1016/j.humimm.2019.04.019","title":"The ABCs (DRDQDPs) of the prozone effect in single antigen bead HLA antibody testing: Lessons from our highly sensitized patients","year":2019,"lang":"en","type":"article","venue":"Human Immunology","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"","keywords":"Immunology; Human leukocyte antigen; Antibody; Antigen; Medicine; Titer","retraction":null,"screen_n_in":null,"score":{"opus":0.02404268407494515,"gpt":0.3131350787591701,"spread":0.2890923946842249,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001276763,0.0001584106,0.0003909068,0.0000650033,0.0001288235,0.00001219676,0.0001477778,0.00009926254,0.00001014409],"category_scores_gemma":[0.00007546892,0.00008549452,0.0001010516,0.0001642158,0.00008354076,0.00003256011,0.00004559791,0.0001960524,0.00005447113],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004787906,"about_ca_system_score_gemma":0.0000340421,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005249357,"about_ca_topic_score_gemma":0.00007215641,"domain_scores_codex":[0.9988313,0.0002122666,0.0003314114,0.0002133692,0.0001674012,0.0002443026],"domain_scores_gemma":[0.9989444,0.0003332692,0.0001892602,0.0004273993,0.00008381393,0.00002183744],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002494645,0.0002437649,0.7431682,0.00003478331,0.0002082603,0.0000149882,0.0002426626,0.000002280749,0.254809,0.0001230969,0.000006815767,0.0008967441],"study_design_scores_gemma":[0.006071762,0.0007865792,0.9576532,0.0003516241,0.0000821673,0.000007946266,0.0000683822,0.000008545207,0.03471097,0.0001067963,0.00007548776,0.00007651042],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973484,0.0002169452,0.000002320592,0.0004296357,0.0003270012,0.0007943803,0.00002439882,0.00002432899,0.0008325979],"genre_scores_gemma":[0.9991831,0.00003409895,0.00007075896,0.00006820708,0.00001979062,0.00001076189,0.0001254689,0.00001960405,0.0004681753],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.220098,"threshold_uncertainty_score":0.3486366,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2062339602","doi":"10.1016/j.humimm.2014.04.001","title":"Early acute antibody-mediated rejection of a negative flow crossmatch 3rd kidney transplant with exclusive disparity at HLA-DP","year":2014,"lang":"en","type":"article","venue":"Human Immunology","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service","keywords":"Medicine; Human leukocyte antigen; Epitope; Immunology; Tissue typing; Kidney; Antigen; Kidney transplantation; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01168998278443284,"gpt":0.2846852637530727,"spread":0.2729952809686398,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007005692,0.0002360067,0.0005569917,0.0001412334,0.0002135787,0.00001136777,0.00009177584,0.0001639456,0.0001914961],"category_scores_gemma":[0.00001802836,0.0001719433,0.000116087,0.0001714859,0.0003165581,0.00009277424,0.00001940642,0.0002164952,0.00005597162],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006582658,"about_ca_system_score_gemma":0.0000512007,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004070275,"about_ca_topic_score_gemma":0.00008701974,"domain_scores_codex":[0.9987246,0.0001117551,0.0003562486,0.0003183759,0.0001874382,0.0003016173],"domain_scores_gemma":[0.9991631,0.0001144596,0.0001952007,0.0003041691,0.0001077309,0.0001153299],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.008765646,0.0007146719,0.4558787,0.0004220646,0.003240866,0.0003475654,0.007792257,0.00001518412,0.5211364,0.001230833,0.00004641225,0.0004093466],"study_design_scores_gemma":[0.01115925,0.00280601,0.9430189,0.0005849145,0.0006721969,0.0003703098,0.00004997203,0.0001032583,0.04070978,0.00017861,0.0001467224,0.0002000955],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955595,0.00005682859,0.001989519,0.0002251593,0.0001389187,0.0004361693,0.0001610648,0.00007106496,0.001361762],"genre_scores_gemma":[0.9966305,0.0001883043,0.0008645746,0.0001834522,0.00003220077,0.00003070206,0.0008671458,0.00002847111,0.001174607],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4871401,"threshold_uncertainty_score":0.7011645,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2048868127","doi":"10.1016/s0198-8859(02)00391-9","title":"HLA-G exhibits low level of polymorphism in indigenous East Africans","year":2002,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Montreal General Hospital; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Exon; Human leukocyte antigen; Biology; Genetics; Allele; HLA-G; Gene; Single-strand conformation polymorphism; Coding region; Tandem exon duplication; Signal peptide; Molecular biology; Peptide sequence; Antigen","retraction":null,"screen_n_in":null,"score":{"opus":0.0780055697130658,"gpt":0.2507187422418451,"spread":0.1727131725287794,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002227316,0.0002481396,0.0005903447,0.000402234,0.0001704352,0.000005515234,0.0004278845,0.0004050482,0.002699361],"category_scores_gemma":[0.00005238449,0.0002405504,0.0001159261,0.0002739266,0.0005549574,0.00009189678,0.0001223125,0.0003976071,0.00119177],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006451629,"about_ca_system_score_gemma":0.00003107861,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006502118,"about_ca_topic_score_gemma":0.0001668476,"domain_scores_codex":[0.9978433,0.0004134937,0.0006199345,0.0004960981,0.00003926598,0.000587907],"domain_scores_gemma":[0.9988615,0.00005579994,0.0002705614,0.0007162034,0.00008062643,0.00001533788],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004700562,0.0006159863,0.0155961,0.00005301521,0.0002756346,0.00004552472,0.01498216,0.00000435847,0.9565738,0.00246684,0.0009977994,0.008341706],"study_design_scores_gemma":[0.008996106,0.001975222,0.6574691,0.0006672067,0.00008911909,0.001470852,0.00241332,0.000001046605,0.30839,0.002205182,0.01497483,0.001348057],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9393815,0.04964224,0.00002472139,0.0001405078,0.0008012176,0.0004032792,0.00005639637,0.00005789757,0.009492239],"genre_scores_gemma":[0.9872144,0.0001003169,0.00001910948,0.00002985701,0.00003737498,0.00004646475,0.00003583274,0.0000274738,0.01248916],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6481839,"threshold_uncertainty_score":0.9995859,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2792280128","doi":"10.1016/j.humimm.2018.03.002","title":"HLA-G and vertical mother-to-child transmission of human papillomavirus infection","year":2018,"lang":"en","type":"article","venue":"Human Immunology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal","funders":"Suomen Hammaslääkäriseura Apollonia; Academy of Finland; Helsingin Yliopisto","keywords":"Concordance; Genotype; Human leukocyte antigen; Offspring; Allele; Pregnancy; Immunology; Cord blood; Human papillomavirus; HLA-G; Medicine; Obstetrics; Biology; Antigen; Genetics; Internal medicine; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01558766587224626,"gpt":0.2727002631403241,"spread":0.2571125972680778,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002088669,0.0001812979,0.0003731631,0.0001824403,0.0004372185,0.000006985968,0.0001408574,0.0003101191,0.001020505],"category_scores_gemma":[0.00003097769,0.0001588825,0.00006984288,0.0001161052,0.0007647605,0.00006543352,0.00008054671,0.0002202028,0.0003674729],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002066124,"about_ca_system_score_gemma":0.00001255029,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003519578,"about_ca_topic_score_gemma":0.00004488552,"domain_scores_codex":[0.9985465,0.0003152976,0.0003762688,0.0004262469,0.0000281473,0.0003074848],"domain_scores_gemma":[0.9993431,0.00003218562,0.00007345004,0.0004256061,0.0001014662,0.00002417491],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009847539,0.0001117306,0.008427289,0.00002844772,0.0001567334,0.000001294042,0.001411425,1.343835e-7,0.9728227,0.006316855,0.000278882,0.0103461],"study_design_scores_gemma":[0.001362692,0.002405066,0.3868691,0.0001739477,0.0000458126,0.0001340008,0.00006327766,1.505682e-7,0.5654495,0.001294937,0.04198301,0.0002184849],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9823764,0.005592313,0.0003156626,0.0001336544,0.000499252,0.0003067338,0.000003410163,0.00007656906,0.010696],"genre_scores_gemma":[0.9984456,0.0000539683,0.00003470093,0.00005673805,0.00008112578,0.00002073389,0.00001566433,0.00002163272,0.001269793],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4073731,"threshold_uncertainty_score":0.9998927,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2238793103","doi":"10.1016/j.humimm.2016.01.007","title":"HLA-DRB1 alleles of susceptibility and protection in Iranians with autoimmune hepatitis","year":2016,"lang":"en","type":"article","venue":"Human Immunology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Gastrointestinal and Liver Diseases Research Center; Alberta Innovates - Health Solutions","keywords":"Autoimmune hepatitis; Allele; HLA-DRB1; Human leukocyte antigen; Immunology; Haplotype; Medicine; Biology; Hepatitis; Genetics; Antigen; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01673510265830853,"gpt":0.2413714242018446,"spread":0.2246363215435361,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111129,0.00009849222,0.0002692656,0.0001005707,0.00005778168,0.000003257611,0.00005740477,0.00008018123,0.0003113656],"category_scores_gemma":[0.00003649875,0.00006330723,0.00003305491,0.00007738181,0.0004006569,0.00007628477,0.00004982243,0.0001183204,0.000006901434],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006156556,"about_ca_system_score_gemma":0.00004587763,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003558975,"about_ca_topic_score_gemma":0.0007372266,"domain_scores_codex":[0.9992845,0.00009537955,0.0002179684,0.0001736855,0.00006576063,0.0001627186],"domain_scores_gemma":[0.9994749,0.00002566941,0.00007992505,0.0003256323,0.0000693769,0.00002447594],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007243266,0.0003312718,0.5642865,0.000117917,0.0001060695,0.00001330995,0.0005499337,1.401632e-7,0.4242412,0.000622444,0.00001024753,0.008996646],"study_design_scores_gemma":[0.002772931,0.001735634,0.9914604,0.0002044143,0.00003309107,0.00003793008,0.0001517641,0.000004820623,0.003067261,0.0002480954,0.0002049871,0.00007867551],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982007,0.0006109194,0.00007827022,0.0003743249,0.000026643,0.0003825457,0.000006772151,0.0000329674,0.0002868347],"genre_scores_gemma":[0.9991444,0.0002742715,0.00006846582,0.00001763751,0.00001000914,0.00002603245,0.000005557989,0.00001113223,0.0004424684],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4271739,"threshold_uncertainty_score":0.538013,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2080589336","doi":"10.1016/j.humimm.2014.06.012","title":"Experimental evidence that mutated-self peptides derived from mitochondrial DNA somatic mutations have the potential to trigger autoimmunity","year":2014,"lang":"en","type":"article","venue":"Human Immunology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network; University of Toronto; York University","funders":"","keywords":"Autoimmunity; Self Tolerance; Immune system; Peripheral blood mononuclear cell; Biology; Autoimmune disease; Somatic cell; Immunology; Priming (agriculture); Mutation; In vitro; Genetics; Gene; Antibody","retraction":null,"screen_n_in":null,"score":{"opus":0.02258228739271795,"gpt":0.2669186947852657,"spread":0.2443364073925477,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001964294,0.0002439975,0.0002466402,0.0000580259,0.0005832197,0.00008373765,0.0006109638,0.0002217751,0.0003134664],"category_scores_gemma":[0.0001904632,0.0001974969,0.0001534546,0.00004079045,0.0002103022,0.00001280644,0.0002698198,0.0001498406,0.0001574378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003012024,"about_ca_system_score_gemma":0.000047911,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002718212,"about_ca_topic_score_gemma":0.00005153259,"domain_scores_codex":[0.9981818,0.0006234221,0.0002944481,0.0004078627,0.0001509811,0.0003414988],"domain_scores_gemma":[0.9988279,0.0001078712,0.0001817668,0.0007693051,0.00005406705,0.00005912123],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001186586,0.00008330524,0.0000325221,0.000003163127,0.0001468511,0.000002745227,0.0009661533,0.00001642898,0.9975031,0.0001173427,0.0001474733,0.0008622739],"study_design_scores_gemma":[0.0006399698,0.0005303864,0.004992885,0.00003365433,0.00005366105,0.00002008633,0.0009058001,0.00003466631,0.9898445,0.0009288789,0.001764803,0.0002507064],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897085,0.001153863,0.00753505,0.0003324057,0.0005156461,0.0005050232,0.00001029397,0.00005488071,0.0001843061],"genre_scores_gemma":[0.9969282,0.00002558806,0.001744576,0.0002773764,0.0002852654,0.0002316293,0.0000978163,0.00003448477,0.0003750201],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007658579,"threshold_uncertainty_score":0.8053692,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2022963978","doi":"10.1016/s0198-8859(02)00372-5","title":"β-cell antigen-specific CD56 + NKT cells from type 1 diabetic patients: autoaggressive effector T cells damage human CD56 + β cells by HLA-restricted and non-HLA-restricted pathways","year":2002,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Natural killer T cell; Cytotoxic T cell; Antigen; Antigen-presenting cell; Biology; CD8; Interleukin 21; T cell; CD1; Molecular biology; Immunology; Immune system; In vitro; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01021625060396713,"gpt":0.196852864136885,"spread":0.1866366135329179,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000114691,0.0009146825,0.001066041,0.0005854975,0.001157853,0.0001449472,0.0007297531,0.001225414,0.01131008],"category_scores_gemma":[0.00004294323,0.0009174258,0.0002529313,0.0005122962,0.0007675674,0.0003559376,0.0003638798,0.001539002,0.007629931],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002239081,"about_ca_system_score_gemma":0.00003410829,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005312233,"about_ca_topic_score_gemma":0.00001368369,"domain_scores_codex":[0.9952362,0.0009388754,0.001161175,0.001287055,0.0001427445,0.001233985],"domain_scores_gemma":[0.9970314,0.0004714296,0.0008718936,0.001168722,0.0003485433,0.0001080231],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001952235,0.001147524,0.0009010009,0.00002264568,0.0003001005,0.00002292802,0.0006619831,0.000003462348,0.8308752,0.0000446802,0.1650738,0.0007514695],"study_design_scores_gemma":[0.007044172,0.002336179,0.03300059,0.0001071468,0.0001179415,0.000007334354,0.0002491626,0.00003840201,0.7842979,0.00003357287,0.1717526,0.001014992],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9770976,0.010959,0.00006279387,0.00002921376,0.007921302,0.001023686,0.000250795,0.0003523861,0.002303234],"genre_scores_gemma":[0.9817939,0.002488687,0.00005097092,0.0002282637,0.0001220985,0.00007197982,0.003058809,0.000129113,0.01205622],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04657733,"threshold_uncertainty_score":0.9993277,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}