{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":3,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":3,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"d6242c96d654","filters":{"venue":"Immunome Research"}},"results":[{"id":"W2089342580","doi":"10.1186/1745-7580-3-5","title":"Strength in numbers: achieving greater accuracy in MHC-I binding prediction by combining the results from multiple prediction tools","year":2007,"lang":"en","type":"article","venue":"Immunome Research","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Computer science; Heuristic; Computational biology; Major histocompatibility complex; Linear discriminant analysis; Epitope; MHC class I; Data mining; Machine learning; Proteome; Artificial intelligence; Bioinformatics; Antigen; Biology; Immunology","authors":[{"name":"Brett Trost","is_ca":true},{"name":"Mik Bickis","is_ca":true},{"name":"Anthony Kusalik","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06078619695299838,"gpt":0.3230145463935503,"spread":0.262228349440552,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02017764,0.002732548,0.002091012,0.005824271,0.0009375602,0.003460326,0.002524348,0.001792575,0.001617147],"category_scores_gemma":[0.04195793,0.0008441315,0.001629801,0.003217836,0.001321606,0.003470229,0.003198513,0.001972767,0.001130574],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009490878,"about_ca_system_score_gemma":0.001728744,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001575847,"about_ca_topic_score_gemma":0.002094136,"domain_scores_codex":[0.987287,0.004786756,0.001075479,0.002069901,0.004259222,0.0005215175],"domain_scores_gemma":[0.9667421,0.02147761,0.003800231,0.003325931,0.003864632,0.0007895816],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001664203,0.0007541089,0.1415899,0.000960006,0.001654878,0.0007869098,0.000610731,0.2018035,0.04130399,0.005029263,0.006025662,0.5978169],"study_design_scores_gemma":[0.0001180169,0.0004948173,0.01562777,0.0001474541,0.000535768,0.0008160859,0.0001565526,0.9375252,0.02625543,0.01378248,0.004360564,0.0001797422],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.3503616,0.001640799,0.6288298,0.001211643,0.0002428183,0.0005184205,0.0006476186,0.008547991,0.007999321],"genre_scores_gemma":[0.5615496,0.0002485141,0.4357454,0.0003369413,0.0001114603,0.0001681213,0.0007775971,0.000349893,0.0007123272],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.02017764,"threshold_uncertainty_score":0.1067109,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2023985368","doi":"10.1186/1745-7580-6-s2-s6","title":"Applying bioinformatics for antibody epitope prediction using affinity-selected mimotopes – relevance for vaccine design","year":2010,"lang":"en","type":"article","venue":"Immunome Research","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"National Institutes of Health; Canadian Breast Cancer Research Alliance; Ontario Institute for Cancer Research","keywords":"Epitope; Mimotope; Phage display; Polyclonal antibodies; Computational biology; Linear epitope; Epitope mapping; Peptide library; Filamentous bacteriophage; Biology; Antibody; Peptide sequence; Bacteriophage; Biochemistry; Genetics","authors":[{"name":"Galina Denisova","is_ca":true},{"name":"D. A. Denisov","is_ca":true},{"name":"Jonathan L. Bramson","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1441707892256436,"gpt":0.4457267012646239,"spread":0.3015559120389804,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001258823,0.0009893719,0.001459386,0.0009729846,0.0004075415,0.001146947,0.0009767272,0.0008501407,0.001902107],"category_scores_gemma":[0.002797837,0.000484522,0.001358982,0.0008407828,0.000346954,0.0007662446,0.0004941734,0.001202937,0.001142873],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006159158,"about_ca_system_score_gemma":0.001112103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002020484,"about_ca_topic_score_gemma":0.002671103,"domain_scores_codex":[0.9994761,0.000217245,0.00003642944,0.0001142917,0.0001147067,0.00004119053],"domain_scores_gemma":[0.9989442,0.0006919011,0.00007522483,0.0000808809,0.0001518588,0.00005595867],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009582895,0.0006171259,0.01177727,0.001198126,0.0006067586,0.0005387881,0.0001421233,0.6134267,0.09104551,0.01192878,0.007345608,0.2604149],"study_design_scores_gemma":[0.00003312502,0.00008796249,0.0006348508,0.00001492281,0.00003222461,0.0000489304,0.00002122991,0.9863141,0.00584564,0.005144109,0.001811262,0.00001165775],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.07181501,0.001466882,0.9150162,0.0009426071,0.00009793854,0.0002234514,0.001149587,0.007328391,0.001959827],"genre_scores_gemma":[0.2954822,0.001239863,0.6986991,0.0004353785,0.0000857605,0.0003409183,0.00243841,0.0004400881,0.0008382405],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.002020484,"threshold_uncertainty_score":0.006657362,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2561655163","doi":"","title":"Subsequent entry biologic (biosimilar) monoclonal antibodies in Canada: A review of key regulatory issues and lessons learned","year":2016,"lang":"en","type":"review","venue":"Immunome Research","topic":"Biosimilars and Bioanalytical Methods","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Biosimilar; Monoclonal antibody; Key (lock); Computer science; Computational biology; Medicine; Antibody; Immunology; Biology; Computer security; Internal medicine","authors":[{"name":"Bradley Scott Wang J","is_ca":false},{"name":"Ágnes Klein","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.2396019944556534,"gpt":0.4691900245388563,"spread":0.2295880300832029,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002588192,0.0007928651,0.001130493,0.003141371,0.0007682169,0.002599418,0.001266209,0.00194725,0.005005275],"category_scores_gemma":[0.00302108,0.0003213633,0.0006065224,0.004401617,0.001315057,0.001676689,0.0008922652,0.0023251,0.0008473247],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01201786,"about_ca_system_score_gemma":0.03392055,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.2290063,"about_ca_topic_score_gemma":0.419649,"domain_scores_codex":[0.9990956,0.00006939658,0.0000816856,0.00009076831,0.0005345618,0.0001281174],"domain_scores_gemma":[0.997622,0.0005994551,0.000296739,0.00003100144,0.001248959,0.0002018968],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001581897,0.00008324537,0.0005430604,0.01881723,0.00006915764,0.0004126661,0.0002038787,0.0003921958,0.001947422,0.009890502,0.09105893,0.8764235],"study_design_scores_gemma":[0.00001285546,0.00003310151,0.0009818343,0.004177844,0.00006053782,0.0003115353,0.0001072119,0.00004596304,0.0005627268,0.0007027122,0.9929865,0.00001721861],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002059165,0.9959164,0.00008012438,0.001269056,0.0003347213,0.000008097331,0.00005638272,0.000005165807,0.002124056],"genre_scores_gemma":[0.001185657,0.9961952,0.0001834217,0.0007592176,0.0001081313,0.000004384546,0.00004658362,0.000002047843,0.00151536],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9879822,"threshold_uncertainty_score":0.4553467,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}